BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11929
(433 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 254 bits (649), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 146/357 (40%), Positives = 207/357 (57%), Gaps = 37/357 (10%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQGK----EVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 250 LAVLGIEGIGSTSLT--PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
L ST AALAAL+GS++++ + E+ +++D+ GC+IGK G
Sbjct: 228 ALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGG 287
Query: 308 SRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+++ EIRQISGA I I E + I G ++V+LAQYLINM +ELQK N
Sbjct: 288 TKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKAN 344
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 208/356 (58%), Gaps = 37/356 (10%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 250 LAVLGIEGIGST-SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
L ST + ALAAL+GS++++ + + E+ +++D+ GC+IGK G+
Sbjct: 228 ALGLAGMTPASTGGINHTALAALAGSQLRTANANRAQQ-QQHEMTVSNDLIGCIIGKGGT 286
Query: 309 RLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
++ EIRQISGA I I E + I G ++V+LAQYLINM +ELQK N
Sbjct: 287 KIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKAN 342
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 250/445 (56%), Gaps = 49/445 (11%)
Query: 1 MDGNGDGKIDEDT--LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA 58
MD + I++D+ +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+
Sbjct: 1 MDMDNKNMINDDSNVTLTIRLIMQGK----EVGSIIGKKGEIVKRFREESGAKINISDGS 56
Query: 59 CPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN 118
CP+RIVTV+GS + + A+ +C+ E++ +
Sbjct: 57 CPERIVTVTGSTNA----------------------IFKAFTLICKKFEEFQDINSGGSG 94
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P+ L+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G
Sbjct: 95 VPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTG 154
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ-- 236
+ I+Q IY IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP
Sbjct: 155 EAITQCIYHICTVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHTD 211
Query: 237 -EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVK-SGGKDTGDDFVET-EIV 293
GK LA L + G+ + L PAALAAL+GS+++ S ++ + +T E+
Sbjct: 212 MSALGKSPLAGLAALGLGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNSNQQTHEMT 271
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK----KMFHIQGCQEAVSLAQYL 349
+ +++ GC+IGK G+++ EIRQISGA I I + + I G +AV+LAQYL
Sbjct: 272 VPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALAQYL 331
Query: 350 INMCIELQKNN--TTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVTLGGLS 407
INM +ELQK N N+ + A S +A + L+ K PG++ L LS
Sbjct: 332 INMSVELQKANLEAQNSPSTGGSSQSSTAASPLASAIPLAQLLAK----PGALNALTSLS 387
Query: 408 ELLANIAASNVKS---TVQTTGAYR 429
L ++ VQTTG +R
Sbjct: 388 ALGGLTELLGGQAGAPPVQTTGVHR 412
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 248 bits (633), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 245/439 (55%), Gaps = 67/439 (15%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D +T+R LFH E+ +IG GG V+ +R +SGA++ I+DG+ P+RIVT++G+ +
Sbjct: 18 DVNLTIRILFHG----REVGNVIGKGGETVKNIRDQSGARVLISDGSTPERIVTITGTTN 73
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+C A + +E++ +N N PL KL++P
Sbjct: 74 A----------------------ICKATELIGLKVEEFFERQNGDWNGPKAPLTFKLIVP 111
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CG +IGKGGCKIK+IR+ SGA +QVASDMLP STER+V++ G TISQ +YQ+C V
Sbjct: 112 ASQCGFIIGKGGCKIKEIRESSGAAIQVASDMLPNSTERLVSITGTTGTISQCVYQVCNV 171
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
L++ + A IPY+P++ +G + G + G+++ +PLA LA
Sbjct: 172 LLDSP---PRSATIPYDPRSKTSGFASSAVGNDF--------------GRQRTNPLASLA 214
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE---------TEIV---LTDDIA 299
LG+ + + PAALAAL+GS++++G + + E TE + + +D+
Sbjct: 215 ALGLGTASTGGINPAALAALAGSQLRTGNRQNRNGSGEHKNQNSNSNTETISMTVPNDLI 274
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESHK------KMFHIQGCQEAVSLAQYLINMC 353
GCVIG+ GS++ EIRQISGA ++I G +H+ + I G ++++S+A+YLI M
Sbjct: 275 GCVIGRRGSKIAEIRQISGALVHIAKGEGTHENGENEDRHITITGNKDSISVAKYLIEMS 334
Query: 354 IELQKNNTTNTSDNPEPADLDAAISAFMTASVN-SSLIEKPTP--HPGSMVTLGGLSELL 410
+ELQK N P L ++ +++++ + L KP S+ LGGL++LL
Sbjct: 335 VELQK---ANLEGQTHPLVLTMVAASPLSSAIPLAQLFAKPGAINALSSLSALGGLTDLL 391
Query: 411 ANIAASNVKSTVQTTGAYR 429
++ +N +QTTG +R
Sbjct: 392 GALSGANQSPPIQTTGVHR 410
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 245 bits (626), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 222/365 (60%), Gaps = 43/365 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 13 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 68
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS--PQP-LQL 126
++ + A+ +C+ E++ + ++ P+P + L
Sbjct: 69 TNS----------------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITL 106
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVASDMLP STER VT+ G + I+Q IY
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSEAITQCIY 166
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP GK +P
Sbjct: 167 HICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNP 223
Query: 247 LAGLAVLGIEGIGSTS----LTPAALAALSGSRVKSGGKDTGDDFVET---EIVLTDDIA 299
LAGLA LG+ G+ + + L PAALAAL+GS++++ + E+ + +++
Sbjct: 224 LAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTVPNELI 283
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIE 355
GC+IGK G+++ EIRQISGA I I E + I G +AVSLAQYLI+M +E
Sbjct: 284 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLAQYLISMSVE 343
Query: 356 LQKNN 360
LQK N
Sbjct: 344 LQKAN 348
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 244 bits (624), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 158/363 (43%), Positives = 218/363 (60%), Gaps = 34/363 (9%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 10 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 65
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN-CSPQPLQLKL 128
T+S+ + TL +C + C D S P+ L+L
Sbjct: 66 -----TNSI---FKAFTL-------ICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRL 110
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G + I+Q IY I
Sbjct: 111 IVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIYHI 170
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
C V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP GK +PLA
Sbjct: 171 CCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNPLA 227
Query: 249 GLAVLGIEGIGSTS----LTPAALAALSGSRVKSGGKDTGDDFVET---EIVLTDDIAGC 301
LA LG+ G+ + + L PAALAAL+GS++++ + E+ + +++ GC
Sbjct: 228 SLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTVPNELIGC 287
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
+IGK G+++ EIRQISGA I I E + I G +AV+LAQYLINM +ELQ
Sbjct: 288 IIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLINMSVELQ 347
Query: 358 KNN 360
K N
Sbjct: 348 KAN 350
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/365 (42%), Positives = 222/365 (60%), Gaps = 43/365 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 13 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 68
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS--PQP-LQL 126
++ + A+ +C+ E++ + ++ P+P + L
Sbjct: 69 TNS----------------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITL 106
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVASDMLP STER VT+ G + I+Q IY
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSEAITQCIY 166
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP GK +P
Sbjct: 167 HICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNP 223
Query: 247 LAGLAVLGIEGIGSTS----LTPAALAALSGSRVKSGGKDTGDDFVET---EIVLTDDIA 299
LAGLA LG+ G+ + + L PAALAAL+GS++++ + E+ + +++
Sbjct: 224 LAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTVPNELI 283
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIE 355
GC+IGK G+++ EIRQISGA I I E + I G +AV+LAQYLI+M +E
Sbjct: 284 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVE 343
Query: 356 LQKNN 360
LQK N
Sbjct: 344 LQKAN 348
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 244 bits (623), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 156/366 (42%), Positives = 225/366 (61%), Gaps = 45/366 (12%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 13 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 68
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS--PQP-LQL 126
++ + A+ +C+ E++ + ++ P+P + L
Sbjct: 69 TNS----------------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITL 106
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVASDMLP STER VT+ G + I+Q IY
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSEAITQCIY 166
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP GK +P
Sbjct: 167 HICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAHSDMGKLGSNP 223
Query: 247 LAGLAVLGIEGIGSTS----LTPAALAALSGSRVKSGGKD----TGDDFVETEIVLTDDI 298
LAGLA LG+ G+ + + L PAALAAL+GS++++ + G++ E+ + +++
Sbjct: 224 LAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAGNNQTH-EMTVPNEL 282
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCI 354
GC+IGK G+++ EIRQISGA I I E + I G +AV+LAQYLI+M +
Sbjct: 283 IGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSV 342
Query: 355 ELQKNN 360
ELQK N
Sbjct: 343 ELQKAN 348
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 227/375 (60%), Gaps = 37/375 (9%)
Query: 1 MDGNGDGKIDEDTLITM--RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA 58
MDGN +++D +T+ R + E+ +IG G IV+R R+ESGAKI+I+DG+
Sbjct: 4 MDGNNKPVLNDDPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGS 59
Query: 59 CPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN 118
CP+RIVTV+G T+S+ + TL +C + C D N
Sbjct: 60 CPERIVTVTGP-----TNSI---FKAFTL-------ICKKFEEWCSQFHDIQGGGNAGGG 104
Query: 119 CS-PQP-LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
P+P + L+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G
Sbjct: 105 GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISG 164
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
+ I+Q IY IC V++E KGA IPY PK GPVIL+GGQA+T+ G YAVP
Sbjct: 165 TSEAITQCIYHICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAFTIQGNYAVPAH 221
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTS----LTPAALAALSGSRVKSGGKDTGDDFVET-- 290
GK PLAGLA LG+ G+ + + L PAALAAL+GS++++ +
Sbjct: 222 SDMGKLGSSPLAGLAALGLGGLAAPANTGGLNPAALAALAGSQLRTNNANRQQPAANNQT 281
Query: 291 -EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSL 345
E+ + +++ GC+IGK G+++ EIRQISGA I I E + I G ++V+L
Sbjct: 282 HEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVAL 341
Query: 346 AQYLINMCIELQKNN 360
AQYLINM +ELQK N
Sbjct: 342 AQYLINMSVELQKAN 356
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 204/354 (57%), Gaps = 37/354 (10%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 250 LAVLGIEGIGSTSLT--PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
L ST AALAAL+GS++++ + E+ +++D+ GC+IGK G
Sbjct: 228 ALGLAGMNPASTGGINHTAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGG 287
Query: 308 SRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
+++ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 288 TKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 341
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 212/361 (58%), Gaps = 45/361 (12%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQGK----EVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEF----NDVGKVGKTQIPIRLI 108
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 109 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 168
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP----- 244
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 169 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 223
Query: 245 -HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
LAG+ GI T PAALAAL+GS++++ + E+ +++D+ GC+I
Sbjct: 224 ALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCII 283
Query: 304 GKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQKN 359
GK G+++ EIRQISGA I I E + I G ++V+LAQYLINM +ELQK
Sbjct: 284 GKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMSVELQKA 343
Query: 360 N 360
N
Sbjct: 344 N 344
>gi|357621941|gb|EHJ73587.1| hypothetical protein KGM_22691 [Danaus plexippus]
Length = 431
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 179/447 (40%), Positives = 242/447 (54%), Gaps = 87/447 (19%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G+ TSS+
Sbjct: 4 KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGN-----TSSI--------- 49
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
A+ +C+ E++ N S P+ L+L++PA+ CGSLIGKGG KIK
Sbjct: 50 --------FKAFTLICKKFEEWCSQFNEGGGGSRAPITLRLIVPASQCGSLIGKGGSKIK 101
Query: 148 DIRDLSGA-NVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP 206
+IRD++G V VAS+MLP STER VT+ G D I+Q IY IC V++E KGA IP
Sbjct: 102 EIRDVTGRLYVHVASEMLPNSTERAVTISGTCDAITQCIYHICCVMLESP---PKGATIP 158
Query: 207 YEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGK--------KQP-------------- 244
Y PK AGPVIL+GGQAYT+ G YAVP Q+ K P
Sbjct: 159 YRPKPNVAGPVILAGGQAYTIQGNYAVPAQDAVCAPVFPMLEVKPPLVGALPPAHLLPPL 218
Query: 245 --HPLAGLA-----------VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET- 290
H + GLA + G+ + L PAALAAL+GS+++S +TG + T
Sbjct: 219 DHHLMGGLAKSPLAGLAALGLGGLGPANTGGLNPAALAALAGSQLRS--SNTGRNQPATN 276
Query: 291 ----EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEA 342
E+ + +++ GC+IGK G+++ EIRQISGA I I E S + I G ++
Sbjct: 277 QQSHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGSTDRTITISGNPDS 336
Query: 343 VSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVT 402
V+LAQYLINM +ELQK N L +AI S + +L GS+
Sbjct: 337 VALAQYLINMSVELQKANLEGGGSG---GPLASAIPLAQLLSKSGALGAL-----GSLSA 388
Query: 403 LGGLSELLANIAASNVKSTVQTTGAYR 429
LGGL++LLA VQTTG +R
Sbjct: 389 LGGLTDLLAG-------GPVQTTGVHR 408
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 243 bits (619), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 205/353 (58%), Gaps = 37/353 (10%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 250 LAVLGIEGIGST-SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
L ST + ALAAL+GS++++ + + E+ +++D+ GC+IGK G+
Sbjct: 228 ALGLAGMTPASTGGINHTALAALAGSQLRTANANRAQQ-QQHEMTVSNDLIGCIIGKGGT 286
Query: 309 RLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
++ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 287 KIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 339
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 223/365 (61%), Gaps = 43/365 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 13 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 68
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS--PQP-LQL 126
++ + A+ +C+ E++ + +++ P+P + L
Sbjct: 69 TNS----------------------IFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITL 106
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G + I+Q IY
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIY 166
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
IC V++E KGA IPY PK GP+IL+GGQAYT+ G YAVP GK +P
Sbjct: 167 HICCVMLESP---PKGATIPYRPKPQVGGPLILAGGQAYTIQGNYAVPAHSDMGKLGSNP 223
Query: 247 LAGLAVLGIEGIGSTS----LTPAALAALSGSRVKSGGKDTGDDFVET---EIVLTDDIA 299
LAGLA LG+ G+ + + L PAALAAL+GS++++ + E+ + +++
Sbjct: 224 LAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTVPNELI 283
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIE 355
GC+IGK G+++ EIRQISGA I I E + I G +AV+LAQYLI+M +E
Sbjct: 284 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALAQYLISMSVE 343
Query: 356 LQKNN 360
LQK N
Sbjct: 344 LQKAN 348
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 242 bits (617), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 204/353 (57%), Gaps = 40/353 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEF----NDVGKVGKTQIPIRLI 108
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 109 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 168
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 169 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 223
Query: 250 LAVLGIEGIGST-SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
L ST + ALAAL+GS++++ + E+ +++D+ GC+IGK G+
Sbjct: 224 ALGLAGMNPASTGGINHTALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGT 283
Query: 309 RLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
++ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 284 KIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 336
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 204/354 (57%), Gaps = 38/354 (10%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ +A+ + + E++ N + + ++L+
Sbjct: 75 TSA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 250 LAVLGIEGIGSTSLT--PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
L ST AALAAL+GS++++ + + E+ +++D+ GC+IGK G
Sbjct: 228 ALGLAGMNPASTGGINHTAALAALAGSQLRTANANRAQQ-QQHEMTVSNDLIGCIIGKGG 286
Query: 308 SRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
+++ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 287 TKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 340
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/353 (39%), Positives = 203/353 (57%), Gaps = 37/353 (10%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ A+ + + E++ N + + ++L+
Sbjct: 75 TSA----------------------IFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEV+ K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVS--KNPLASLA 227
Query: 250 LAVLGIEGIGST-SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
L ST + ALAAL+GS++++ + + E+ +++D+ GC+IGK G+
Sbjct: 228 ALGLAGMTPASTGGINHTALAALAGSQLRTANANRAQQ-QQHEMTVSNDLIGCIIGKGGT 286
Query: 309 RLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
++ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 287 KIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 339
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 233 bits (595), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 209/358 (58%), Gaps = 41/358 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP----- 244
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 245 -HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
LAG+ GI T PAALAAL+GS++++ + E+ +++D+ GC+I
Sbjct: 228 ALGLAGMNPASTGGINHTGSAPAALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCII 287
Query: 304 GKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
GK G+++ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 288 GKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 345
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 147/379 (38%), Positives = 211/379 (55%), Gaps = 63/379 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQGK----EVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEF----NDVGKVGKTQIPIRLI 108
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 109 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 168
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP----- 244
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 169 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 223
Query: 245 ----HPLAGLAVLGIEGIGSTSLTPA---------------ALAALSGSRVKSGGKDTGD 285
+ + GI G S + A ALAAL+GS++++
Sbjct: 224 ALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSAPAALAALAGSQLRTANPANRA 283
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQE 341
+ E+ +++D+ GC+IGK G+++ EIRQISGA I I E + I G +
Sbjct: 284 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 343
Query: 342 AVSLAQYLINMCIELQKNN 360
+V+LAQYLINM +ELQK N
Sbjct: 344 SVALAQYLINMSVELQKAN 362
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 231 bits (589), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 222/438 (50%), Gaps = 98/438 (22%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G+CP+R
Sbjct: 5 DSKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSCPER 60
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
IVT++G D + A++ + E D + + S
Sbjct: 61 IVTITGPTDA----------------------IFKAFSMIALKFEEDINASMTNSSVTSK 98
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 99 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAI 158
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------ 223
Q + QIC+V++E KGA IPY PK +A P+I +GGQ
Sbjct: 159 IQCVKQICVVMLESP---PKGATIPYRPKPASA-PIIFAGGQVRADTILASAGNHTVLAQ 214
Query: 224 -----AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS 272
A+T+ G+YA+P + ++A + P G G G+ +TS T +
Sbjct: 215 PQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSH----- 269
Query: 273 GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHK 331
E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I TE S +
Sbjct: 270 ------------------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAE 311
Query: 332 KMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIE 391
+ I G +SLAQYLIN +E+ K +T T+ P DL+ +S T
Sbjct: 312 RQVTITGSPANISLAQYLINASLEMAK-VSTQTASVTTPVDLNMNLSQSAT--------- 361
Query: 392 KPTPHPGSMVTLGGLSEL 409
PT P SM L S +
Sbjct: 362 -PTSTPTSMAVLAAASAV 378
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 30/141 (21%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L IP G +IG+ G KI +IR +SGA +++A + S ER VT+ G+P IS A Y
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIA-NATEGSAERQVTITGSPANISLAQY 328
Query: 187 QICLVL---------------IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG-- 229
I L ++ + + + A P +M +L+ A T+
Sbjct: 329 LINASLEMAKVSTQTASVTTPVDLNMNLSQSATPTSTPTSM----AVLAAASAVTVSTPP 384
Query: 230 --------EYAVPVQEVAGKK 242
YAVPV + G K
Sbjct: 385 PLPTLPTTHYAVPVSSLLGMK 405
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 154/438 (35%), Positives = 222/438 (50%), Gaps = 98/438 (22%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G+CP+R
Sbjct: 5 DSKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSCPER 60
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
IVT++G D + A++ + E D + + S
Sbjct: 61 IVTITGPTDA----------------------IFKAFSMIALKFEEDINASMTNSTVTSK 98
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 99 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAI 158
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------ 223
Q + QIC+V++E KGA IPY PK +A P+I +GGQ
Sbjct: 159 IQCVKQICVVMLESP---PKGATIPYRPKPASA-PIIFAGGQVRADTILASAGNHTVLAQ 214
Query: 224 -----AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS 272
A+T+ G+YA+P + ++A + P G G G+ +TS T +
Sbjct: 215 PQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSH----- 269
Query: 273 GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHK 331
E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I TE S +
Sbjct: 270 ------------------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAE 311
Query: 332 KMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIE 391
+ I G +SLAQYLIN +E+ K +T T+ P DL+ +S T
Sbjct: 312 RQVTITGSPANISLAQYLINASLEMAK-VSTQTASVTTPVDLNMNLSQSAT--------- 361
Query: 392 KPTPHPGSMVTLGGLSEL 409
PT P SM L S +
Sbjct: 362 -PTSTPTSMAVLAAASAV 378
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 30/141 (21%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L IP G +IG+ G KI +IR +SGA +++A + S ER VT+ G+P IS A Y
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIA-NATEGSAERQVTITGSPANISLAQY 328
Query: 187 QICLVL---------------IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG-- 229
I L ++ + + + A P +M +L+ A T+
Sbjct: 329 LINASLEMAKVSTQTASVTTPVDLNMNLSQSATPTSTPTSM----AVLAAASAVTVSTPP 384
Query: 230 --------EYAVPVQEVAGKK 242
YAVPV + G K
Sbjct: 385 PLPTLPTTHYAVPVSSLLGMK 405
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 230 bits (587), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 201/362 (55%), Gaps = 48/362 (13%)
Query: 3 GNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC 59
G + K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G C
Sbjct: 31 GKMESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNC 86
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIVT++G D + A+ + E+ IN M N
Sbjct: 87 PERIVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNS 122
Query: 120 ---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G
Sbjct: 123 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG 182
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP-- 234
PD I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 183 TPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHP 238
Query: 235 ----VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
+ ++A ++ P P G G + L G +S G D
Sbjct: 239 DLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTH 295
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYL
Sbjct: 296 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYL 355
Query: 350 IN 351
IN
Sbjct: 356 IN 357
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 212/378 (56%), Gaps = 53/378 (14%)
Query: 5 GDGKIDEDTLITM--RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
GD + +D +T+ R + E+ +IG G IV+R R+ESGAKI+I+D +CP+R
Sbjct: 10 GDINLSDDPAVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDCSCPER 65
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
IVTVSGS S++ Y TL + C+ + N PQ
Sbjct: 66 IVTVSGS-----RSAI---YKAFTLITKKFEEWCSQFQ------------DNANTQGKPQ 105
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
+ ++L++PA+ CGSLIGKGG KIK+IR+++G ++QVAS+MLP STER VT+ G+ + I+
Sbjct: 106 -IPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPNSTERAVTLSGSAEAIT 164
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG-K 241
Q IY IC V++E KGA IPY PK GPVI++ GQAYT+ G YAVP QEV+G
Sbjct: 165 QCIYHICCVMLESP---PKGATIPYRPKPQVNGPVIVANGQAYTIQGNYAVPAQEVSGIA 221
Query: 242 KQPHPLAGLAVL---------GIEGIGSTS-------LTPAALAALSGSRVKSGGKDTGD 285
K P L G+ G S + AALAAL+GS++++
Sbjct: 222 KNPLAGLAALGLAGAIPSNTGGLNPTGKYSSPNALEYIPHAALAALAGSQLRTNNNRNVA 281
Query: 286 DFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK----KMFHIQGC 339
E+ + +D+ GC+IGK G+++ EIRQISGA I I E + I G
Sbjct: 282 PVQSQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGN 341
Query: 340 QEAVSLAQYLINMCIELQ 357
++V+LAQYLINM I ++
Sbjct: 342 PDSVALAQYLINMRISME 359
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 199/359 (55%), Gaps = 47/359 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G D + A+ + E+ IN N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINSMSNSTATSK 95
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 96 P-PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 154
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------ 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 155 IIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQLT 210
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 211 KLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMG---QSPGLDASPPASTHELT 267
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 268 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/362 (39%), Positives = 201/362 (55%), Gaps = 48/362 (13%)
Query: 3 GNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC 59
G + K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G C
Sbjct: 34 GKMESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNC 89
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIVT++G D + A+ + E+ IN M N
Sbjct: 90 PERIVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNS 125
Query: 120 ---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G
Sbjct: 126 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG 185
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP-- 234
PD I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 TPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHP 241
Query: 235 ----VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
+ ++A ++ P P G G + L G +S G D
Sbjct: 242 DLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTH 298
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYL
Sbjct: 299 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYL 358
Query: 350 IN 351
IN
Sbjct: 359 IN 360
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 201/363 (55%), Gaps = 49/363 (13%)
Query: 3 GNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC 59
G + K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G C
Sbjct: 31 GKMESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNC 86
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIVT++G D + A+ + E+ IN M N
Sbjct: 87 PERIVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNS 122
Query: 120 ---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G
Sbjct: 123 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG 182
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP-- 234
PD I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 183 TPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHP 238
Query: 235 -----VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
+ ++A ++ P P G G + L G +S G D
Sbjct: 239 DQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPAST 295
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQY
Sbjct: 296 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQY 355
Query: 349 LIN 351
LIN
Sbjct: 356 LIN 358
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 200/359 (55%), Gaps = 48/359 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDLT 241
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELT 298
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 200/359 (55%), Gaps = 48/359 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDLT 241
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELT 298
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/359 (39%), Positives = 200/359 (55%), Gaps = 48/359 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDLT 241
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELT 298
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 200/367 (54%), Gaps = 63/367 (17%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 EAKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G D + A+ + E+ IN N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINSMSNSTATSK 95
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 96 P-PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 154
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
I Q + QIC+V++E KGA IPY PK +A PVI +GGQAY++ G+YA+P
Sbjct: 155 IIQCVKQICVVMLESP---PKGATIPYRPKPASA-PVIFAGGQAYSIQGQYAIP------ 204
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTP--AALAALSGSRV-------------KSGGKDTGD 285
P L L L ++ T TP A G ++ +S G D
Sbjct: 205 --HPDQLTKLHQLAMQ---QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSAGMDASS 259
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVS 344
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I + E S ++ I G +S
Sbjct: 260 QASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQITITGSPANIS 319
Query: 345 LAQYLIN 351
LAQYLIN
Sbjct: 320 LAQYLIN 326
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 201/363 (55%), Gaps = 49/363 (13%)
Query: 3 GNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC 59
G + K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G C
Sbjct: 31 GKMESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNC 86
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIVT++G D + A+ + E+ IN M N
Sbjct: 87 PERIVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNS 122
Query: 120 ---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G
Sbjct: 123 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG 182
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP-- 234
PD I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 183 TPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHP 238
Query: 235 -----VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
+ ++A ++ P P G G + L G +S G D
Sbjct: 239 DQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPAST 295
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQY
Sbjct: 296 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQY 355
Query: 349 LIN 351
LIN
Sbjct: 356 LIN 358
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 143/360 (39%), Positives = 212/360 (58%), Gaps = 31/360 (8%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R + E+ +IG G +++ R+ESGAKI+I+DG+CP+RIVTV+GS
Sbjct: 74 LTVRLIMQG----KEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGS----- 124
Query: 75 TSSVETGYPGHTLWVTSVDN----VCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
T ++ + +L + +C + +L++ N + + P+ L+L++
Sbjct: 125 TEAILKAF---SLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPK---PPVTLRLIV 178
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VTV G + I++ IYQIC
Sbjct: 179 PASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTVSGTAEAITKCIYQICC 238
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KGA IPY PK PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 239 VMMESP---PKGATIPYRPKPAMP-PVIFAGGQAYTVQGQYAIPHPDLT---KLHQLALQ 291
Query: 251 AVLGIEGIGSTSLTPAALAALSGSR----VKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
+ G ++ P ALAAL+ + + TE+ + +D+ GC+IGK
Sbjct: 292 HAPLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKG 351
Query: 307 GSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTS 365
GS++ EIRQ+SGA I I E K + I G EA++LAQYLIN +EL KN T + S
Sbjct: 352 GSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINTSMELHKNLTLDLS 411
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 33 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 88
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 89 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 124
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 125 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 184
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 185 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 240
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 241 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 297
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 298 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 357
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 209
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 210 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 266
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 267 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 209
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 210 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 266
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 267 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 241
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 298
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 241
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 298
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 143/367 (38%), Positives = 199/367 (54%), Gaps = 63/367 (17%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G D + A+ + E+ IN N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINSMSNSTATSK 95
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 96 P-PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 154
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 155 IIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP------ 204
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTP--AALAALSGSRV-------------KSGGKDTGD 285
P L L L ++ T TP A G ++ +S G D
Sbjct: 205 --HPDQLTKLHQLAMQ---QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASP 259
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVS 344
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +S
Sbjct: 260 PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANIS 319
Query: 345 LAQYLIN 351
LAQYLIN
Sbjct: 320 LAQYLIN 326
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 241
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 298
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 37 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 92
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 93 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 128
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 129 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 188
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 189 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 244
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 245 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 301
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 302 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 361
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 47 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 102
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 103 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 138
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 139 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 198
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 199 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 254
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 255 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 311
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 312 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 371
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 228 bits (582), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 210/354 (59%), Gaps = 41/354 (11%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L E+ +IG G IV+R R+ESGA+I+I+DG+CP+RIVT++G+ D
Sbjct: 18 LTIRLLMAG----KEVGSIIGKKGEIVKRFREESGARINISDGSCPERIVTITGTTDA-- 71
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPAT 133
+ A+N +C+ LE+ + P+P + L+L++PA+
Sbjct: 72 --------------------IFKAFNLICKKLEE-EVGGPLAGTAIPRPPITLRLIMPAS 110
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGG KIK+IR+++GA+V VAS+MLP STER VTV G D I+Q IY IC V++
Sbjct: 111 QCGSLIGKGGSKIKEIREITGASVVVASEMLPNSTERAVTVSGTSDAITQCIYHICCVML 170
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG---- 249
E KGA IPY PK GPVIL+GGQAYT+ G YAVP K +PLA
Sbjct: 171 ESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPATPDMNKLSGNPLANLAAL 227
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGK---DTGDDFVETEIVLTDDIAGCVIGKA 306
G S+ +ALAAL+GS+++SGG +G E+ + +++ GC+IGK
Sbjct: 228 GLGGLTGTGGGGSMNASALAALAGSQLRSGGGGGPQSGAPQQSQEMAVPNELIGCIIGKG 287
Query: 307 GSRLLEIRQISGAQINIHTGTE---SHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
G+++ EIRQISGA I I + S ++ I G E+V+LAQYLIN + ++
Sbjct: 288 GTKIAEIRQISGAMIRISNCEDRESSSERTITITGTAESVALAQYLINTRLAME 341
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 59 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 114
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 115 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 150
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 151 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 210
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 211 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 266
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 267 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 323
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 324 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGSPANISLAQYLIN 383
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 141/360 (39%), Positives = 199/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMRDESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 209
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + + L G + G D E+
Sbjct: 210 TKLHQLAMQQTPFPPLGQTNPAFPGEKLSLHSSEEAQNLMG---QPSGLDASPPASTHEL 266
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 267 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 143/365 (39%), Positives = 200/365 (54%), Gaps = 59/365 (16%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
IVT++G D ++ + AY F ED + + S
Sbjct: 58 IVTITGPTD-----AIFKAF------------AMIAYKFE----EDITNSMSNSTATSKP 96
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 156
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 157 QCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP-------- 204
Query: 243 QPHPLAGLAVLGIEGIGSTSLTP--AALAALSGSRV-------------KSGGKDTGDDF 287
P L L L ++ T TP A G ++ +S G D
Sbjct: 205 HPDQLTKLHQLAMQ---QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPA 261
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLA
Sbjct: 262 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLA 321
Query: 347 QYLIN 351
QYLIN
Sbjct: 322 QYLIN 326
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 144/370 (38%), Positives = 201/370 (54%), Gaps = 56/370 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 77 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 132
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---C 119
IVT++G D + A+ + E+ IN M N
Sbjct: 133 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 168
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 169 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 228
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQE-- 237
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P +
Sbjct: 229 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDPL 284
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALA--ALSGSRV-------------KSGGKD 282
G QP + L L + T P A G ++ +S G D
Sbjct: 285 AHGLYQPSAILQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSPGLD 344
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G
Sbjct: 345 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPA 404
Query: 342 AVSLAQYLIN 351
+SLAQYLIN
Sbjct: 405 NISLAQYLIN 414
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 228 bits (580), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 199/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIFQCVKQICVVMLESP---PKGATIPYRPKPA-CTPVIFAGGQAYTIQGQYAIPHPDQL 209
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 210 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 266
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 267 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 326
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 227 bits (578), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 140/358 (39%), Positives = 196/358 (54%), Gaps = 66/358 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G D + A+ + E+ IN N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINSMSNSTATSK 95
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 96 P-PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 154
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------ 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 155 IIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDLTK 210
Query: 235 VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVL 294
+ ++A ++ P P G TPA G D E+ +
Sbjct: 211 LHQLAMQQTPFPPLG------------QTTPAF-----------PGLDASPPASTHELTI 247
Query: 295 TDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 248 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 305
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 195/353 (55%), Gaps = 55/353 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---C 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP----- 204
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
P L L L ++ T P L + G D E+ + +D+
Sbjct: 205 ---HPDQLTKLHQLAMQ---QTPFPP-----LGQTNPAFPGLDASPPASTHELTIPNDLI 253
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 254 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 195/353 (55%), Gaps = 55/353 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---C 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP----- 236
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
P L L L ++ T P L + G D E+ + +D+
Sbjct: 237 ---HPDQLTKLHQLAMQ---QTPFPP-----LGQTNPAFPGLDASPPASTHELTIPNDLI 285
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 338
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 195/353 (55%), Gaps = 55/353 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP----- 204
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
P L L L ++ T P L + G D E+ + +D+
Sbjct: 205 ---HPDQLTKLHQLAMQ---QTPFPP-----LGQTNPAFPGLDASPPASTHELTIPNDLI 253
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 254 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 203/395 (51%), Gaps = 79/395 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQGK----EVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QE P+
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQETC------PVFP 223
Query: 250 LAV------LGIEGIGSTSLTPAALA---------------------------------- 269
LA+ GI G+ L A L
Sbjct: 224 LALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVAKNPLASLAALGLAGMNP 283
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES 329
A +G + + E+ +++D+ GC+IGK G+++ EIRQISGA I I E
Sbjct: 284 ASTGGINHTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEER 343
Query: 330 H----KKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+ I G ++V+LAQYLINM +ELQK N
Sbjct: 344 EGGNTDRTITISGNPDSVALAQYLINMSVELQKAN 378
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 195/353 (55%), Gaps = 55/353 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP----- 236
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
P L L L ++ T P L + G D E+ + +D+
Sbjct: 237 ---HPDQLTKLHQLAMQ---QTPFPP-----LGQTNPAFPGLDASPPASTHELTIPNDLI 285
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 338
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 147/403 (36%), Positives = 213/403 (52%), Gaps = 64/403 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G+CP+R
Sbjct: 5 DTKVTEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSCPER 60
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
IVT++G D + A++ + E D + + S
Sbjct: 61 IVTITGPTDA----------------------IFKAFSMIALKFEEDINASMTNSTVTSK 98
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LVIPA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 99 PPVTLRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAI 158
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------ 223
Q + QIC+V++E KGA IPY PK +A P+I +GGQ
Sbjct: 159 IQCVKQICVVMLESP---PKGATIPYRPKPASA-PIIFAGGQVRADTLLASAGNHAVLAQ 214
Query: 224 -----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVL--GIEGIGSTSLTPAALAALSGSRV 276
A+T+ G+YA+P +V+ H L L L + + ++ L +
Sbjct: 215 PQTAPAFTIQGQYAIPHPDVSSM---HVLYFLYSLLPSLTKLHQLAMQHPPFTPLGQTTP 271
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I TE S ++
Sbjct: 272 GFPGLDASTPASSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVT 331
Query: 336 IQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
I G +SLAQYLIN +E+ K +T T+ P DL+ +S
Sbjct: 332 ITGSPANISLAQYLINASLEMAK-VSTQTASVTTPVDLNMNLS 373
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 141/356 (39%), Positives = 198/356 (55%), Gaps = 61/356 (17%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
IVT++G D ++ + AY F ED + + S
Sbjct: 58 IVTITGPTD-----AIFKAF------------AMIAYKFE----EDIISSMSNSPATSKP 96
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 156
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQ 236
Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P +
Sbjct: 157 QCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDLTKLH 212
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTD 296
++A ++ P P G PA A L S S E+ + +
Sbjct: 213 QLAMQQTPFPPLG------------QTNPAFPAGLDASPPAS----------THELTIPN 250
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 251 DLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 190/341 (55%), Gaps = 52/341 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G D
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDT-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQLKLVIP 131
+ A+ + E+ IN M N S P+ L+LV+P
Sbjct: 70 --------------------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
++E KGA IPY PK + PVI SGGQAYT+ G+YA+P P L L
Sbjct: 168 MLESP---PKGATIPYRPKPAST-PVIFSGGQAYTIQGQYAIP--------HPDQLTKLH 215
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
L ++ T TP A + G D E+ + +D+ GC+IG+ G+++
Sbjct: 216 QLAMQ---QTPFTPLGQATPAFP-----GLDASPPASTHELTIPNDLIGCIIGRQGTKIN 267
Query: 312 EIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
EIRQ+SGAQI I E S ++ I G +SLAQYLIN
Sbjct: 268 EIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLIN 308
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 226 bits (575), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 190/341 (55%), Gaps = 52/341 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G D
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDT-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQLKLVIP 131
+ A+ + E+ IN M N S P+ L+LV+P
Sbjct: 70 --------------------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
++E KGA IPY PK + PVI SGGQAYT+ G+YA+P P L L
Sbjct: 168 MLESP---PKGATIPYRPKPAST-PVIFSGGQAYTIQGQYAIP--------HPDQLTKLH 215
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
L ++ T TP L + G D E+ + +D+ GC+IG+ G+++
Sbjct: 216 QLAMQ---QTPFTP-----LGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKIN 267
Query: 312 EIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
EIRQ+SGAQI I E S ++ I G +SLAQYLIN
Sbjct: 268 EIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLIN 308
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/341 (40%), Positives = 190/341 (55%), Gaps = 52/341 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G D
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDT-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQLKLVIP 131
+ A+ + E+ IN M N S P+ L+LV+P
Sbjct: 70 --------------------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVRQICVV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
++E KGA IPY PK + PVI SGGQAYT+ G+YA+P P L L
Sbjct: 168 MLESP---PKGATIPYRPKPTST-PVIFSGGQAYTIQGQYAIP--------HPDQLTKLH 215
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
L ++ T TP L + G D E+ + +D+ GC+IG+ G+++
Sbjct: 216 QLAMQ---QTPFTP-----LGQTTPAFPGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 267
Query: 312 EIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
EIRQ+SGAQI I E S ++ I G +SLAQYLIN
Sbjct: 268 EIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLIN 308
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 143/376 (38%), Positives = 208/376 (55%), Gaps = 59/376 (15%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP----- 244
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QEVA K P
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQEVA--KNPLASLA 227
Query: 245 ----HPLAGLAVLGIEGIGSTSLTPA---------------ALAALSGSRVKSGGKDTGD 285
+ + GI G S + A ALAAL+GS++++
Sbjct: 228 ALGLAGMNPASTGGINHTGELSASAARCQTDFQSNLGSAPAALAALAGSQLRTANPANRA 287
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQE 341
+ E+ +++D+ GC+IGK G+++ EIRQISGA I I E + I G +
Sbjct: 288 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 347
Query: 342 AVSLAQYLINMCIELQ 357
+V+LAQYLINM I ++
Sbjct: 348 SVALAQYLINMRISME 363
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 222 bits (565), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 150/397 (37%), Positives = 211/397 (53%), Gaps = 55/397 (13%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRI 63
NG + + +T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI
Sbjct: 17 NGLEETELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSTARITISEGSCPERI 72
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQ 122
T++GS D V A + + LE D S
Sbjct: 73 TTITGSTDA----------------------VFRAVSMIAFKLEEDLGTGAINGGTVSKP 110
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I
Sbjct: 111 PVTLRLVIPASQCGSLIGKAGAKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAII 170
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGK 241
Q + QIC V++E KGA IPY P ++ GPV+LS Q +++ G+Y + EVA
Sbjct: 171 QCVRQICAVILESP---PKGATIPYHPN-LSLGPVLLSANQGFSMQGQYGGISQAEVAKL 226
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGC 301
+Q L+G V S TP+ +A L DT E ++ +D+ GC
Sbjct: 227 QQ---LSGHPV----SFSSLGQTPSIVAGL----------DTNSQNSSQEFLVPNDLIGC 269
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+IG+ GS++ EIRQ+SGA I I TE S ++ I G +++LAQYLI+ C+E K
Sbjct: 270 IIGRQGSKISEIRQMSGAHIKIGNQTEGSAERHVTITGTPVSITLAQYLISACLETAK-- 327
Query: 361 TTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHP 397
+TS P P DL S +T S +L P P
Sbjct: 328 --STSQTP-PVDLGMTFSQPLTPSPAPTLTAVAAPPP 361
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 148/420 (35%), Positives = 215/420 (51%), Gaps = 105/420 (25%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS 67
K D + +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVT+S
Sbjct: 6 KDDSNISLTLRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTIS 61
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRN------RMENCSP 121
GS + + A++ +C +E++ +N + C
Sbjct: 62 GSTEA----------------------IYKAFSLICTKVEEFIEMQNGKTGATAIGKCG- 98
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ L+L++PA+ CGSLIGKGG KIK+IR+ +GA +QVASD+LP STER VT+ G D+I
Sbjct: 99 --MTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAVTLTGTRDSI 156
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLH------------- 228
+Q I+ IC V++E KG IPY K PVIL+GGQA+TL
Sbjct: 157 TQCIFHICAVMVESP---PKGVTIPYRAKPQMGAPVILAGGQAFTLASAGSAAGCDVGTM 213
Query: 229 ----GEYAVPVQEVAGKKQPHPLAGLAV--------------LGIEGIG----------- 259
G Y P+ V P P A ++ G +G
Sbjct: 214 MVGGGPYNAPMLMVP----PSPGAAASLGLIDPLDYPLLKNAFGPSQLGKLTGNPLAGLA 269
Query: 260 ----------STSLTPAALAALSGSRVKSGG------KDTGDDFVETEIVLTDDIAGCVI 303
+ S PAALAAL+GS+++S G +G E+ + +D+ GC+I
Sbjct: 270 ALGLGSLGGPANSFNPAALAALAGSQLRSNGSGANINSRSGGGQQTHEMTVPNDLIGCII 329
Query: 304 GKAGSRLLEIRQISGAQINI-----HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
GK G+++ EIRQISGA I I G+ S + I G ++V+LAQYLINM +E+Q+
Sbjct: 330 GKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQYLINMSLEIQR 389
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS---DMLPMSTERIVTVHGNPDTISQ 183
++ +P G +IGKGG KI +IR +SGA +++++ ST+R +T+ GNPD+++
Sbjct: 317 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVAL 376
Query: 184 AIYQICLVLIECTLQVVKGAVIPYE 208
A Y LI +L++ + +++ E
Sbjct: 377 AQY-----LINMSLEIQRASMLQSE 396
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 137/355 (38%), Positives = 205/355 (57%), Gaps = 55/355 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R + E+ +IG GG +++ R++SGA+I+I+D +C +RIVTV+GS +
Sbjct: 19 LTIRLIMQG----KEVGSIIGKGGETIKKFREQSGARINISDSSCAERIVTVTGSTE--- 71
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPAT 133
+++N A+ + + E+ ++ N + +P+P + L+LV+PA+
Sbjct: 72 ----------------AINN---AFEMITKKFEE-DVSNNMANSSTPKPPVTLRLVVPAS 111
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGG KIK+IR+ +GA+VQVA DML STER VT+ G P+ I++ +YQIC V++
Sbjct: 112 QCGSLIGKGGSKIKEIRENTGASVQVAGDMLHQSTERAVTISGTPEAITKCVYQICCVML 171
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
E KGA IPY PK NA + AY +HG YAVP + + H L
Sbjct: 172 ESP---PKGATIPYRPKPTNA----TATHPAYAVHGNYAVPYPDFM---KLHHLTMQHTP 221
Query: 254 GIEGIGSTSLTPAAL--------AALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
+ G T TP AL AA +G++V + G+ T EI++ +D+ GCVIG+
Sbjct: 222 FLP--GQTPFTPTALNMGYGVANAASAGTQVATTGQQT------YEIMIPNDLIGCVIGR 273
Query: 306 AGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
G+++ EIRQISGA I I E S+ + I G EA++LA +LIN +EL KN
Sbjct: 274 GGAKINEIRQISGATIKIANSQEGSNDRSVTISGTVEAINLAHFLINSSLELAKN 328
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 108 DYHINRNRMENCSPQ-PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM 166
+ HI + M N P L ++L++ GS+IGKGG IK R+ SGA + ++
Sbjct: 4 EEHIKK--MANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSSC-- 59
Query: 167 STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT 226
ERIVTV G+ + I+ A I E + + P P T+ +++ Q +
Sbjct: 60 -AERIVTVTGSTEAINNAFEMITKKFEEDVSNNMANSSTPKPPVTLR---LVVPASQCGS 115
Query: 227 LHGEYAVPVQEV 238
L G+ ++E+
Sbjct: 116 LIGKGGSKIKEI 127
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLI 350
+++ G +IGK G + + R+ SGA+INI + + +++ + G EA++ A +I
Sbjct: 22 RLIMQGKEVGSIIGKGGETIKKFREQSGARINI-SDSSCAERIVTVTGSTEAINNAFEMI 80
Query: 351 NMCIELQKNNTTNTSDNPEP 370
E +N S P+P
Sbjct: 81 TKKFEEDVSNNMANSSTPKP 100
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 140/388 (36%), Positives = 202/388 (52%), Gaps = 87/388 (22%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
DGK+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 5 DGKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGTCPER 60
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
IVT++G D + A++ + E D + + S
Sbjct: 61 IVTITGPTDA----------------------IFKAFSMIALKFEEDINASMTNSSVTSK 98
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 99 PPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAI 158
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------ 223
Q + QIC+V++E KGA IPY PK +A P+I +GGQ
Sbjct: 159 IQCVKQICVVMLESP---PKGATIPYRPKPASA-PIIFAGGQVRADTILASAGNHTVLAQ 214
Query: 224 -----AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS 272
A+T+ G+YA+P + ++A + P G G G+ +T+ T +
Sbjct: 215 PQPAPAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSH----- 269
Query: 273 GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHK 331
E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I TE S +
Sbjct: 270 ------------------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAE 311
Query: 332 KMFHIQGCQEAVSLAQYLINMCIELQKN 359
+ I G +SLAQYLIN I K+
Sbjct: 312 RQVTITGSPANISLAQYLINASIYFLKS 339
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 198/346 (57%), Gaps = 48/346 (13%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+ E+ +IG G +++ R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 1 MQEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTG------------------ 42
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-PLQLKLVIPATHCGSLIGKGGCK 145
S + + A++ + R E+ + + + P+ P+ L+L++PA+ CGSLIGKGG K
Sbjct: 43 ----STEAILKAFSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSK 98
Query: 146 IKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
IK+IR+ + A++QVAS+MLP STER VTV G D I++ IYQIC V++E KGA I
Sbjct: 99 IKEIRE-ARASIQVASEMLPNSTERAVTVSGTADAITKCIYQICCVMMESP---PKGATI 154
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP-LAGLAVLGIEGIGSTSLT 264
PY PK PVI +GGQAYT+ G+YA+ PHP L L L ++
Sbjct: 155 PYRPKPAMP-PVIFAGGQAYTVQGQYAI----------PHPDLTKLHQLALQHA------ 197
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
L S + TE+ + +D+ GC+IGK GS++ EIRQ+SGA I I
Sbjct: 198 -PLLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKIS 256
Query: 325 TGTESHK-KMFHIQGCQEAVSLAQYLINMCIELQKNNTTN-TSDNP 368
E K + I G EA++LAQYLIN +EL KN T + TS++P
Sbjct: 257 NSEEGSKDRTVTISGTPEAINLAQYLINTSMELHKNLTLDLTSNHP 302
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/401 (35%), Positives = 208/401 (51%), Gaps = 73/401 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G+CP+RIVT++G D
Sbjct: 17 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDA-- 70
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A++ + E D + + S P+ L+LV+PA+
Sbjct: 71 --------------------IFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPAS 110
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I Q + QIC+V++
Sbjct: 111 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 170
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----------------------AYTLHGE 230
E KGA IPY PK +GP+I +GGQ A+ + G+
Sbjct: 171 ESP---PKGATIPYRPKPA-SGPIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAIQGQ 226
Query: 231 YAVPVQEVAGKKQ------------PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS 278
YA+P +V+ H L+ L L + T TP L +
Sbjct: 227 YAIPHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHTPFTP-----LGQTTPGF 281
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQ 337
G D E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I +E + ++ I
Sbjct: 282 PGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTIT 341
Query: 338 GCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
G +SLAQYLIN +E+ K +T T+ P DL+ +S
Sbjct: 342 GSPANISLAQYLINASLEMAK-LSTQTASVTTPVDLNMNLS 381
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 201/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ +N M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIVNS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 209
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G A G +
Sbjct: 210 LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQANPAFPGEKLPLHSSEEAQN 269
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 270 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 327 SERQITITGTPANISLAQYLIN 348
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 135/343 (39%), Positives = 199/343 (58%), Gaps = 48/343 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P + ++ A++ + LE D + S P+ L+LV+
Sbjct: 64 -----------PTNAIF--------KAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P QP L L
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIP--------QPD-LTKL 211
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
L ++ S P + SG+ SGG D E+ + +D+ GC+IG+ G+++
Sbjct: 212 HQLAMQ----QSHFP---MSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKI 264
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
EIRQ+SGAQI I E S+ + I G ++SLAQYLIN+
Sbjct: 265 NEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLINV 307
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 199/381 (52%), Gaps = 69/381 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G D + A+ + E+ IN N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINSMSNSTATSK 95
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 96 P-PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 154
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ----------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 155 IIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLLL 210
Query: 224 ------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAAL 271
AYT+ G+YA+P + ++A ++ P P G G + L
Sbjct: 211 QHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNL 270
Query: 272 SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 271 MG---QSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSS 327
Query: 331 KKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 328 ERQITITGTPANISLAQYLIN 348
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 218 bits (555), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 143/375 (38%), Positives = 199/375 (53%), Gaps = 69/375 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D K+ E L +T+R L H E+ +IG G V+++R ESGA+I+I++G CP+R
Sbjct: 2 DPKVTEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMRVESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN N M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAFKFEE-DIN-NSMTNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGMPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK +A PVI +GGQAYT+ G+YA+P + A
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPASA-PVIFAGGQAYTIQGQYAIPHPDDA 209
Query: 240 -----------------GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS-----GSRVK 277
+ HP + L + P +L +
Sbjct: 210 CLLSAEYKTALTSTLWRSPQLAHPSSQLK--------EAAWRPESLRGKMELKNCNEESE 261
Query: 278 SGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHI 336
+ G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I
Sbjct: 262 NWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITI 321
Query: 337 QGCQEAVSLAQYLIN 351
G +SLAQYLIN
Sbjct: 322 TGSPANISLAQYLIN 336
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 138/359 (38%), Positives = 195/359 (54%), Gaps = 67/359 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---C 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KG + PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESPR---KGVTVVVAPKPAST-PVIFAGGQAYTIQGQYAIPHPDLT 209
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G PA A L S S E+
Sbjct: 210 KLHQLAMQQTPFPPLG------------QTNPAFPAGLDASPPAS----------THELT 247
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 248 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 306
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 209
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 210 LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 269
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 270 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 327 SERQITITGTPANISLAQYLIN 348
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 209
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 210 LQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 269
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 270 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 327 SERQITITGTPANISLAQYLIN 348
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 131/350 (37%), Positives = 197/350 (56%), Gaps = 46/350 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTN 66
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-YHINRNRMENCSPQPLQLKLVI 130
+ A+ + LE+ + + S P+ L+LV+
Sbjct: 67 A----------------------IFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQ 243
V++E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 223
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
P+ G GI S+S A G D E+ + +D+ GC+I
Sbjct: 224 HFPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCII 273
Query: 304 GKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
G+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 274 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 323
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 241
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 242 LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 301
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 302 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 358
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 359 SERQITITGTPANISLAQYLIN 380
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 209
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 210 LQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 269
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 270 LMG---QSSGLDVSPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 327 SERQITITGTPANISLAQYLIN 348
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/359 (37%), Positives = 195/359 (54%), Gaps = 54/359 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---C 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KG + PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESPR---KGVTVVVAPKPAST-PVIFAGGQAYTIQGQYAIPHPDLT 209
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G + P A+ R D E+
Sbjct: 210 KLHQLAMQQTPFPPLGQ---------TNPAFPGTDRAVPFVRSPWACLDASPPASTHELT 260
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 261 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 319
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 241
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 242 LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 301
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 302 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 358
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 359 SERQITITGTPANISLAQYLIN 380
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 241
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 242 LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 301
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 302 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 358
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 359 SERQITITGTPANISLAQYLIN 380
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/419 (35%), Positives = 213/419 (50%), Gaps = 105/419 (25%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS 67
K D + +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVT+S
Sbjct: 6 KDDSNISLTLRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTIS 61
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRN------RMENCSP 121
GS + + A++ +C +E++ +N + C
Sbjct: 62 GSTEA----------------------IYKAFSLICTKVEEFIEMQNGKTGATAIGKCG- 98
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ L+L++PA+ CGSLIGKGG KIK+IR+ +GA +QVASD+LP STER VT+ G D+I
Sbjct: 99 --MTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAVTLTGTRDSI 156
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLH------------- 228
+Q I+ IC V++E KG IPY K PVIL+GGQA+TL
Sbjct: 157 TQCIFHICAVMVESP---PKGVTIPYRAKPQMGAPVILAGGQAFTLASAGSAAGCDVGTM 213
Query: 229 ----GEYAVPVQEVAGKKQPHPLAGLAV--------------LGIEGIG----------- 259
G Y P+ V P P A ++ G +G
Sbjct: 214 MVGGGPYNAPMLMVP----PSPGAAASLGLIDPLDYPLLKNAFGPSQLGKLTGNPLAGLA 269
Query: 260 ----------STSLTPAALAALSGSRVKSGG------KDTGDDFVETEIVLTDDIAGCVI 303
+ S PAALAAL+GS+++S G +G E+ + +D+ GC+I
Sbjct: 270 ALGLGSLGGPANSFNPAALAALAGSQLRSNGSGANINSRSGGGQQTHEMTVPNDLIGCII 329
Query: 304 GKAGSRLLEIRQISGAQINI-----HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
GK G+++ EIRQISGA I I G+ S + I G ++V+LAQYLINM I ++
Sbjct: 330 GKGGTKIAEIRQISGAMIRISNCEDREGSASTDRTITITGNPDSVALAQYLINMRISME 388
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 196/350 (56%), Gaps = 46/350 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQ 243
V++E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 223
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
P+ G GI S+S A G D E+ + +D+ GC+I
Sbjct: 224 HFPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCII 273
Query: 304 GKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
G+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 274 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 323
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 241
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 242 LQPPPLPAYTIQGQYAIPHPELTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 301
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 302 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 358
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 359 SERQITITGTPANISLAQYLIN 380
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 190/353 (53%), Gaps = 69/353 (19%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 44 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 99
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---C 119
IVT++G D + A+ + E+ IN M N
Sbjct: 100 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 135
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 136 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 195
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+
Sbjct: 196 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAI------ 245
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
PHP + + +P A E+ + +D+
Sbjct: 246 ----PHPDVSFHFVCLPFSSCLDASPPASTH--------------------ELTIPNDLI 281
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 282 GCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 334
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-----PLQLK 127
S SS +PG T+W S+ + T F L+ H R +ME+ + L ++
Sbjct: 3 SVISSCAFFFPGDTIWAPSILPLGTLGTF-SHHLQT-HFGR-KMESKVSEGGLNVTLTIR 59
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L++ GS+IGK G +K +R+ SGA + ++ P ERIVT+ G D I +A
Sbjct: 60 LLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCP---ERIVTITGPTDAIFKAFAM 116
Query: 188 ICLVLIE 194
I E
Sbjct: 117 IAYKFEE 123
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 142/382 (37%), Positives = 200/382 (52%), Gaps = 71/382 (18%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 209
Query: 224 -------AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAA 270
AYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 210 LQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPLPPLGQTNPAFPGEKLPLHSSEEAQN 269
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S
Sbjct: 270 LMG---QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS 326
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
++ I G +SLAQYLIN
Sbjct: 327 SERQITITGTPANISLAQYLIN 348
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 196/349 (56%), Gaps = 48/349 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P++ G GI S+S A G D E+ + +D+ GC+IG
Sbjct: 221 FPMSH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCIIG 270
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 271 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 196/349 (56%), Gaps = 48/349 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P++ G G+ S+S A G D E+ + +D+ GC+IG
Sbjct: 221 FPMS-HGNTGFSGVESSSPDEKGYWA---------GLDASAQTTSHELTIPNDLIGCIIG 270
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 271 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 195/349 (55%), Gaps = 48/349 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+ G GI S+S A G D E+ + +D+ GC+IG
Sbjct: 221 FPMT-HGNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCIIG 270
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 271 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/341 (38%), Positives = 193/341 (56%), Gaps = 47/341 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
P + ++ A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 --------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA---- 219
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
+ + G+ S G D E+ + +D+ GC+IG+ G+++ E
Sbjct: 220 ----------MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINE 269
Query: 313 IRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
IRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 270 IRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 310
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 130/318 (40%), Positives = 180/318 (56%), Gaps = 41/318 (12%)
Query: 44 LRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMC 103
+R+ESGA+I+I++G CP+RIVT++G D + A+ +
Sbjct: 1 MREESGARINISEGNCPERIVTITGPTDA----------------------IFKAFAMIA 38
Query: 104 RSLEDYHINRNRMENC---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
E+ IN M N S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA
Sbjct: 39 YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA 96
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS 220
DMLP STER VT+ G PD I Q + QIC+V++E KGA IPY PK + PVI +
Sbjct: 97 GDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFA 152
Query: 221 GGQAYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGS 274
GGQAYT+ G+YA+P + ++A ++ P P G G + L G
Sbjct: 153 GGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG- 211
Query: 275 RVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKM 333
+S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++
Sbjct: 212 --QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQ 269
Query: 334 FHIQGCQEAVSLAQYLIN 351
I G +SLAQYLIN
Sbjct: 270 ITITGTPANISLAQYLIN 287
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/349 (37%), Positives = 195/349 (55%), Gaps = 48/349 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+ G GI S+S A G D E+ + +D+ GC+IG
Sbjct: 221 FPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCIIG 270
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 271 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 132/355 (37%), Positives = 198/355 (55%), Gaps = 66/355 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R + ++ +IG G ++R R+ESGA+I+I+DG+ P+RIVT++GS +N
Sbjct: 20 LTIRLIMQG----KDVGSIIGKKGDTIKRFREESGARINISDGSSPERIVTITGSTEN-- 73
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED----YHINRNRMENCSPQPLQLKLVI 130
+ A+N + + E+ H+N + P+ L+L++
Sbjct: 74 --------------------ILKAFNMIGKKFEEDMKAAHVN----SSVPVPPVTLRLIV 109
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGG KIK+IR+++GA++QVA DMLP STER VTV G PD ISQ +Y IC
Sbjct: 110 PASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNSTERAVTVSGTPDAISQCVYHICC 169
Query: 191 VLIECTLQVVKGAVIPYEPK----TMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
V++E KGA IPY+P+ T +GPV+ +GGQ LH ++A ++ P+
Sbjct: 170 VMLESP---PKGATIPYKPRPASGTSTSGPVVFAGGQLTKLH--------QLALQQTPYI 218
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET-EIVLTDDIAGCVIGK 305
G + PAALA G + S G+ +T E+ + +++ GC+IGK
Sbjct: 219 TPGTTL------------PAALATQFGVQTAS---QPGNPSSQTHELTIPNELIGCIIGK 263
Query: 306 AGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
G ++ EIRQ SGA I I E S + I G E++S+AQ+LIN +EL K
Sbjct: 264 GGCKINEIRQCSGATIKIAGMQEGSTDRQVTITGTPESISMAQFLINTSLELAKR 318
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L IP G +IGKGGCKI +IR SGA +++A M ST+R VT+ G P++IS A +
Sbjct: 249 ELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAG-MQEGSTDRQVTITGTPESISMAQF 307
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNA----GPVILSGGQAYTLHGEYAVPVQEVAGKK 242
LI +L++ K T P L GQ T AVP+ + K
Sbjct: 308 -----LINTSLELAKRLTPDLTTPTTAPSSTLNPTSLGVGQGGT-PTPLAVPLSSLMSLK 361
Query: 243 QPHPLAG 249
P PL G
Sbjct: 362 -PVPLLG 367
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 214 bits (546), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/370 (38%), Positives = 197/370 (53%), Gaps = 59/370 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 DPKVTEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN N M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAFKFEE-DIN-NSMTNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGMPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK +A PVI +GGQAYT+ G+ A+P + A
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPASA-PVIFAGGQAYTIQGQCAIPHPDDA 209
Query: 240 -----------------GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
+ HP + L SL ++ G D
Sbjct: 210 CLLSAEYKTALTSTLWRSPQLAHPSSQLKEAAWR---PESLRGKMELKNCNEESENWGMD 266
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G
Sbjct: 267 ANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITGSPA 326
Query: 342 AVSLAQYLIN 351
+SLAQYLIN
Sbjct: 327 NISLAQYLIN 336
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 129/340 (37%), Positives = 192/340 (56%), Gaps = 49/340 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
P + ++ A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 --------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
E KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA----- 215
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEI 313
+ + G+ S G D E+ + +D+ GC+IG+ G+++ EI
Sbjct: 216 ---------MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 266
Query: 314 RQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
RQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 267 RQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 306
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 194/349 (55%), Gaps = 48/349 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+ G GI S+S A G D E+ + +D+ GC+IG
Sbjct: 221 FPMT-HGNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCIIG 270
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ G+++ EIRQ+SGAQI E S + I G ++SLAQYLIN+
Sbjct: 271 RQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 193/343 (56%), Gaps = 49/343 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
P + ++ A+ + L ED + S P+ L+LV+
Sbjct: 64 -----------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA-- 215
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
+ + G+ S G D E+ + +D+ GC+IG+ G+++
Sbjct: 216 ------------MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 306
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/341 (37%), Positives = 192/341 (56%), Gaps = 47/341 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
P + ++ A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 --------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA---- 219
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
+ + G+ S G D E+ + +D+ GC+IG+ G+++ E
Sbjct: 220 ----------MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINE 269
Query: 313 IRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
IRQ+SGAQI E S + I G ++SLAQYLIN+
Sbjct: 270 IRQMSGAQIKTANPVEGSTDRQVTITGSAASISLAQYLINV 310
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 210/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSGHAV----PFASPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPGS-APADLPAPFSPPLTA 337
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 129/343 (37%), Positives = 193/343 (56%), Gaps = 49/343 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
P + ++ A+ + L ED + S P+ L+LV+
Sbjct: 64 -----------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA-- 215
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
+ + G+ S G D E+ + +D+ GC+IG+ G+++
Sbjct: 216 ------------MQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKI 263
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 264 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 306
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 195/360 (54%), Gaps = 52/360 (14%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIEC-TLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP---- 234
I Q + QIC+V++E + +G PK + PVI +GGQAYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLEVQSKSPPRGVSRVVAPKPAST-PVIFAGGQAYTIQGQYAIPHPDL 212
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G + P A+ R D E+
Sbjct: 213 TKLHQLAMQQTPFPPLGQ---------TNPAFPGTDRAVPFVRSPWACLDASPPASTHEL 263
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 264 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 323
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 130/349 (37%), Positives = 194/349 (55%), Gaps = 48/349 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+ G GI S+S A G D E+ + +D+ GC+I
Sbjct: 221 FPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCIIR 270
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 271 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q + + G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFPVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSGHAV----PFASPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPGS-TPADLSAPFSPPLTA 337
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 193/365 (52%), Gaps = 78/365 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R++SGA+I+I++G CP+RIVT++G D
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTITGPTDA-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQLKLVIP 131
+ A+ + E+ IN M N S P+ L+LV+P
Sbjct: 70 --------------------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----------------------AYTLH 228
L+E KGA IPY PK + PVI SGGQ AYT+
Sbjct: 168 LLESP---PKGATIPYRPKPAST-PVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQ 223
Query: 229 GEYAVPVQEVAGKKQPHP-LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
G+YA+ PHP L+ L L ++ T TP L + G D +
Sbjct: 224 GQYAI----------PHPDLSKLHQLAMQ---QTPFTP-----LGQTTPAFPGLDASNQA 265
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S ++ I G +SLA
Sbjct: 266 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLA 325
Query: 347 QYLIN 351
QYLIN
Sbjct: 326 QYLIN 330
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 337
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGAQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 337
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 146/394 (37%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSTNQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APTDLPAPFSPPLTA 337
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 140/367 (38%), Positives = 195/367 (53%), Gaps = 61/367 (16%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRL--RKESGAKISITDGACP 60
+ K+ E L +T+R L H E+ +IG + L +SGA+I+I++G CP
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCP 57
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS 120
+RIVT++G D ++ + AY F ED + + S
Sbjct: 58 ERIVTITGPTD-----AIFKAF------------AMIAYKFE----EDITNSMSNSTATS 96
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 97 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 156
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 157 IIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP------ 206
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTP--AALAALSGSRV-------------KSGGKDTGD 285
P L L L ++ T TP A G ++ +S G D
Sbjct: 207 --HPDQLTKLHQLAMQ---QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASP 261
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVS 344
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +S
Sbjct: 262 PASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANIS 321
Query: 345 LAQYLIN 351
LAQYLIN
Sbjct: 322 LAQYLIN 328
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 127/348 (36%), Positives = 192/348 (55%), Gaps = 61/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+ G G + GG D E+ + +D+ GC+IG
Sbjct: 221 FPM-GPNNPGFQ----------------------GGMDASAQTSSHEMTIPNDLIGCIIG 257
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ GS++ EIRQ+SGAQI I E S + I G ++SLA+YLIN
Sbjct: 258 RQGSKINEIRQMSGAQIKIANPVEGSADRQVTITGSAASISLAEYLIN 305
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 138/365 (37%), Positives = 191/365 (52%), Gaps = 78/365 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G D
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDT-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQLKLVIP 131
+ A+ + E+ IN M N S P+ L+LV+P
Sbjct: 70 --------------------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----------------------AYTLH 228
++E KGA IPY PK + PVI SGGQ AYT+
Sbjct: 168 MLESP---PKGATIPYRPKPAST-PVIFSGGQVSAELLKTTLTPNLTLLMQQKCPAYTIQ 223
Query: 229 GEYAVPVQEVAGKKQPHP-LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
G+YA+ PHP L L L ++ T TP L + G D
Sbjct: 224 GQYAI----------PHPDLTKLHQLAMQ---QTPFTP-----LGQTTPAFPGLDAAPPA 265
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S ++ I G +SLA
Sbjct: 266 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLA 325
Query: 347 QYLIN 351
QYLIN
Sbjct: 326 QYLIN 330
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 137/367 (37%), Positives = 190/367 (51%), Gaps = 81/367 (22%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ES A+I++++G CP+RIVT++G D
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREESSARINVSEGNCPERIVTITGPTDA-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR-NRMENCSPQPLQLKLVIPAT 133
+ A+ + E+ IN + + S P+ L+LV+PA+
Sbjct: 70 --------------------IFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPAS 109
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V++
Sbjct: 110 QCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVML 169
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------AYTLHG 229
E KGA IPY PK A PVI SGGQ AYT+ G
Sbjct: 170 ESP---PKGATIPYRPKPATA-PVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQG 225
Query: 230 EYAVPVQEVAGKKQPHP-LAGLAVLGIEGIGSTSL---TPAALAALSGSRVKSGGKDTGD 285
+YA+ PHP L L L ++ TSL TPA G D
Sbjct: 226 QYAI----------PHPDLTKLHQLAMQQTPFTSLGQTTPAF-----------PGVDASS 264
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVS 344
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G +S
Sbjct: 265 QASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSDRQITITGTPANIS 324
Query: 345 LAQYLIN 351
LAQYLIN
Sbjct: 325 LAQYLIN 331
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/348 (36%), Positives = 193/348 (55%), Gaps = 61/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
PLA S+ + G D E+ + +D+ GC+IG
Sbjct: 221 FPLA-----------------------PSSQGFTAGMDASAQTGSHELTIPNDLIGCIIG 257
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ G+++ EIRQ+SGAQI I E S + I G ++SLA+YLIN
Sbjct: 258 RQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSPASISLAEYLIN 305
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 191/342 (55%), Gaps = 43/342 (12%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTT 66
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
+ + A++ + LE D + S P+ ++LV+
Sbjct: 67 S----------------------IFKAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +TV G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTPQSIIECVKQICI 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK + PVI +GGQAY + G++A+P +V+ L L
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDVSEGPSLTKLHQL 220
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
A+ +P +A ++ G D E+ + +D+ GC+IG+ G+++
Sbjct: 221 AM---------QQSPFPIA--HSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKI 269
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
EIRQ+SGAQI I E S + I G ++SLA+YLIN
Sbjct: 270 NEIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLIN 311
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 126/350 (36%), Positives = 192/350 (54%), Gaps = 65/350 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTT 66
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC---SPQPLQLKL 128
+ + A++ + LE+ N M N S P+ ++L
Sbjct: 67 S----------------------IFKAFSMIIEKLEEDI--SNSMTNSTATSKPPVTMRL 102
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
V+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +TV G P +I + + QI
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTPQSIIECVKQI 162
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKK 242
C+V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++
Sbjct: 163 CIVMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQ 218
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
P P+A ++ G D E+ + +D+ GC+
Sbjct: 219 SPFPIA-----------------------HSNQGFQAGMDASAQTGSHELTIPNDLIGCI 255
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
IG+ G+++ EIRQ+SGAQI I E S + I G ++SLA+YLIN
Sbjct: 256 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLIN 305
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+ AV + S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSSHAV----PFATPSMVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 337
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 211 bits (536), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 132/350 (37%), Positives = 195/350 (55%), Gaps = 47/350 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+ +R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVK-MREESGARINISEGNCPERIITLAG--- 62
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 63 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 103
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 104 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 163
Query: 191 VLIECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQ 243
V++E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 164 VMLETLSQSPPKGVTIPYWPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 222
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
P+ G GI S+S A G D E+ + +D+ GC+I
Sbjct: 223 HFPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCII 272
Query: 304 GKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
G+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 273 GRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 322
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 211 bits (536), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 126/345 (36%), Positives = 193/345 (55%), Gaps = 61/345 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
P ++ A++ + L ED + + S P+ L++V+PA+
Sbjct: 64 --------PTTAIF--------KAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQPHPL 247
E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P PL
Sbjct: 168 ESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPL 223
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
A S+ + G D E+ + +D+ GC+IG+ G
Sbjct: 224 A-----------------------PSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQG 260
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+++ EIRQ+SGAQI I E S+ + I G ++SLA+YLIN
Sbjct: 261 AKINEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLIN 305
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 123/348 (35%), Positives = 190/348 (54%), Gaps = 61/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTT 66
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
+ + A++ + LE D + S P+ ++LV+
Sbjct: 67 S----------------------IFKAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+A ++ G D E+ + +D+ GC+IG
Sbjct: 221 FPIA-----------------------HSNQGFQAGMDASAQTGSHELTIPNDLIGCIIG 257
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ G+++ EIRQ+SGAQI I E S + I G ++SLA+YLIN
Sbjct: 258 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSHASISLAEYLIN 305
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+ AV + S+ P G D G
Sbjct: 206 GAVTPTEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 337
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 126/342 (36%), Positives = 191/342 (55%), Gaps = 40/342 (11%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK + PVI +GGQAY + G++A+P + + L L
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDSSSASISPQLTKL 220
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
L ++ +P + + GG D E+ + +D+ GC+IG+ GS++
Sbjct: 221 HQLAMQ------QSPFPMGPNNPGF--QGGMDASAQTSSHEMTIPNDLIGCIIGRQGSKI 272
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
EIRQ+SGAQI I E S + I G ++SLA+YLIN
Sbjct: 273 NEIRQMSGAQIKIANPVEGSADRQVTITGSAASISLAEYLIN 314
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+ AV + S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 337
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+ AV + S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 337
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 135/360 (37%), Positives = 200/360 (55%), Gaps = 53/360 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQLKL 128
P + ++ A+ + LE+ R+ M N S P+ L L
Sbjct: 64 -----------PTNAIF--------KAFAMIIDKLEEDI--RSSMTNSTAASRPPVTLSL 102
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
V+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QI
Sbjct: 103 VVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQI 162
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
+V++E KG IPY PK ++ PVI +GGQAYT+ G+YA+P QP L
Sbjct: 163 FVVMLESP---PKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIP--------QPD-LT 209
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
L L I+ + G+ S G D E+ + +D+ GC+IG+ G+
Sbjct: 210 KLHQLAIQQ--------SHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGA 261
Query: 309 RLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDN 367
++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+ + L ++ +N
Sbjct: 262 KINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVRLSLVTGGMGSSYNN 321
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/358 (37%), Positives = 201/358 (56%), Gaps = 51/358 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQ 243
V++E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P + ++A ++
Sbjct: 165 VMLETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 223
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET--EIVLTDDIAGC 301
P+ G GI S+S VK G + D +T E+ + +++ GC
Sbjct: 224 HFPMTH-GNTGFSGIESSS-----------PEVK-GYWASLDASTQTTHELTIPNNLIGC 270
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+IG+ G+ + EIRQ+SGAQI I E S + I G ++SLAQYLIN + +K
Sbjct: 271 IIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 328
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 209 bits (533), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 145/388 (37%), Positives = 207/388 (53%), Gaps = 56/388 (14%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS +V + + F ED
Sbjct: 57 SCPERITTITGST-------------------AAVFHAVSMIAFKLD--EDLCAAPTNGG 95
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G
Sbjct: 96 SVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV 155
Query: 178 PDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQ 236
PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y AV
Sbjct: 156 PDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTSA 211
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTD 296
EV +Q L+G AV S S+ P G D G E ++ +
Sbjct: 212 EVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGAQTSSQEFLVPN 250
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E
Sbjct: 251 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 310
Query: 356 LQKNNTTNTSDNPEPADLDAAISAFMTA 383
K+ + T + P DL A S +TA
Sbjct: 311 TAKSTSGGTPGS-TPTDLPAPFSPPLTA 337
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 145/395 (36%), Positives = 211/395 (53%), Gaps = 70/395 (17%)
Query: 1 MDGNGDGKIDEDT----LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD 56
M G+ DG ++E+ +T+R L H E+ +IG G V+R+R++S A+I+I++
Sbjct: 1 MSGS-DGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
G+CP+RI T++GS TA F S+ + ++ +
Sbjct: 56 GSCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLC 88
Query: 117 E------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 89 AAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTER 148
Query: 171 IVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE 230
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQ 204
Query: 231 Y-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
Y AV EV +Q L+ AV + S+ P G D G
Sbjct: 205 YGAVTPAEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSS 243
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQY
Sbjct: 244 QEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQY 303
Query: 349 LINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
LI C+E K+ + T + PADL A S +TA
Sbjct: 304 LITACLETAKSTSGGTPGS-APADLPAPFSPPLTA 337
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 141/377 (37%), Positives = 202/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + N S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCSATANGGNISRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S + P G D G E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPGMVP--------------GLDPGAQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL A S +TA
Sbjct: 322 S-APADLPAPFSPPLTA 337
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/345 (36%), Positives = 192/345 (55%), Gaps = 61/345 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
P ++ A++ + L ED + + S P+ L++V+PA+
Sbjct: 64 --------PTTAIF--------KAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQPHPL 247
E KG IPY PK + PV +GGQAY + G++A+P + ++A ++ P PL
Sbjct: 168 ESP---PKGVTIPYRPKP-SGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPL 223
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
A S+ + G D E+ + +D+ GC+IG+ G
Sbjct: 224 A-----------------------PSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQG 260
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+++ EIRQ+SGAQI I E S+ + I G ++SLA+YLIN
Sbjct: 261 AKINEIRQMSGAQIKIANPVEGSNDRQVTITGSPASISLAEYLIN 305
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 196/348 (56%), Gaps = 62/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+A + G GI +++ T + E+ + +D+ GC+IG
Sbjct: 221 FPIAP-SNQGFTGIDASAQTSSH-----------------------EMTIPNDLIGCIIG 256
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ G+++ EIRQ+SGAQI I + S + I G ++SLA+YLIN
Sbjct: 257 RQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLIN 304
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 196/348 (56%), Gaps = 62/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+A + G GI +++ T + E+ + +D+ GC+IG
Sbjct: 221 FPIAP-SNQGFTGIDASAQTSSH-----------------------EMTIPNDLIGCIIG 256
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ G+++ EIRQ+SGAQI I + S + I G ++SLA+YLIN
Sbjct: 257 RQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLIN 304
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 207 bits (528), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 192/348 (55%), Gaps = 61/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E + KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLEQSPP--KGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 221
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+A + T G D E+ + +D+ GC+IG
Sbjct: 222 FPIAP---------NNQGFT---------------GMDASAQTSSHEMTIPNDLIGCIIG 257
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ GS++ EIRQ+SGAQI I + S + I G ++SLA+YLIN
Sbjct: 258 RQGSKINEIRQMSGAQIKIANPVDGSADRQVTITGSPASISLAEYLIN 305
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 207 bits (527), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 190/348 (54%), Gaps = 62/348 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQP 244
V++E KG IPY PK + PVI +GGQAY + G++A+P + ++A ++ P
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
P+A S G D E+ + +D+ GC+IG
Sbjct: 221 FPIA------------------------PSNQGFTGMDASAQTSSHEMTIPNDLIGCIIG 256
Query: 305 KAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ G+++ EIRQ+SGAQI I + S + I G ++SLA+YLIN
Sbjct: 257 RQGAKINEIRQMSGAQIKIANPVDGSTDRQVTITGSPASISLAEYLIN 304
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 202/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 58 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 108
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 109 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 146
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 147 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 206
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 207 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 259
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 260 SGHAV----PFASPSVVP--------------GLDPSAQTSSQEFLVPNDLIGCVIGRQG 301
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 302 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 361
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL A S +TA
Sbjct: 362 S-APADLPAPFSPPLTA 377
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 207/394 (52%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSTNQGFSVQGQY 205
Query: 232 A-VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
V EV +Q L+G AV S S+ P G D
Sbjct: 206 GTVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPSTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 337
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 127/328 (38%), Positives = 185/328 (56%), Gaps = 44/328 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------------------- 44
Query: 88 WVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ + A+ + L ED + S P+ L+LV+PA+ CGSLIGKGGCKI
Sbjct: 45 ---PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKI 101
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV-VKGAVI 205
K+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++E Q KG I
Sbjct: 102 KEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTI 161
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP 265
PY PK ++ PVI +GGQAYT+ G+YA+P QP L L L ++ S P
Sbjct: 162 PYRPKP-SSSPVIFAGGQAYTIQGQYAIP--------QPD-LTKLHQLAMQ----QSHFP 207
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
++ G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I
Sbjct: 208 -----MTHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 262
Query: 326 GTE-SHKKMFHIQGCQEAVSLAQYLINM 352
E S + I G ++SLAQYLIN+
Sbjct: 263 PVEGSTDRQVTITGSAASISLAQYLINV 290
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 207 bits (527), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 198/379 (52%), Gaps = 55/379 (14%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVT 65
DG ++ +T+R L H E+ +IG G V+++R+ESGA+I+I++G+ P+RIVT
Sbjct: 10 DGSLN--VTLTLRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSSPERIVT 63
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPL 124
++G + + A++ + + E D S P+
Sbjct: 64 ITGPTEG----------------------IFRAFSMIAQKFEEDITAAMTNSNVTSKPPV 101
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+LV P + CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G P I+Q
Sbjct: 102 TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQC 161
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAGP-VILS---GGQAYTLHGEYAVPVQEVAG 240
+ IC V++E KGA IPY PK + AG +L+ QA+ + G+YA Q+
Sbjct: 162 VRHICSVMLESP---PKGATIPYRPKVIPAGTHAVLAPQHSAQAFAIPGQYAFAHQD--- 215
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAG 300
L L L ++ I L +L S G D E+ + +D G
Sbjct: 216 ------LTKLHQLAMQHI--------PLPSLGQSNPTFPGLDASAPTSSQELAIPNDFIG 261
Query: 301 CVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
C+IG+ GS++ EIRQ+SGA I I + T+ S + I G ++S+AQYLIN +E+ K
Sbjct: 262 CIIGRQGSKINEIRQVSGAHIKIASATDGSAMRQVTITGSPASISVAQYLINASLEMAK- 320
Query: 360 NTTNTSDNPEPADLDAAIS 378
T + + P DL+ + S
Sbjct: 321 YTMQAASSATPVDLNMSFS 339
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 207 bits (526), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 202/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GLDPAAQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL A S +TA
Sbjct: 322 S-APADLPAPFSPPLTA 337
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/326 (38%), Positives = 179/326 (54%), Gaps = 49/326 (15%)
Query: 46 KESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRS 105
++SGA+I+I++G CP+RIVT++G D + A+ +
Sbjct: 93 QQSGARINISEGNCPERIVTITGPTDA----------------------IFKAFAMIAYK 130
Query: 106 LEDYHINRNRMENC---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD 162
E+ IN M N S P+ L+LV+PA+ CGSLIGKGG KIK++R+ +GA VQVA D
Sbjct: 131 FEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGD 188
Query: 163 MLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGG 222
MLP STER VT+ G P+ I Q + QIC+V++E KGA IPY PK + PVI SGG
Sbjct: 189 MLPNSTERAVTISGTPEAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFSGG 244
Query: 223 QAYTLHGEYAVP-------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP---------A 266
QAYT+ G+YA+P + ++A ++ P G G + P
Sbjct: 245 QAYTIQGQYAIPHPDQLSKLHQLAMQQPPFTPLGQTTPAFPGTYPPTWRPRWPQLLLSFV 304
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
A S S V + D G+ E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I
Sbjct: 305 PADARSSSSV-TAALDAGNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA 363
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLIN 351
E S ++ I G +SLAQYLIN
Sbjct: 364 MEGSSERQITITGTPANISLAQYLIN 389
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/378 (35%), Positives = 194/378 (51%), Gaps = 94/378 (24%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G+CP+RIVT++G D
Sbjct: 17 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDA-- 70
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A++ + E D + + S P+ L+LV+PA+
Sbjct: 71 --------------------IFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVPAS 110
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I Q + QIC+V++
Sbjct: 111 QCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVML 170
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KGA IPY PK +A P+I +GGQ
Sbjct: 171 ESP---PKGATIPYRPKPASA-PIIFAGGQVRADTILASAGNHTELRLSYLTDLCLNCAC 226
Query: 224 ---AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGS 274
A+T+ G+YA+P + ++A + P G G G+ +T+ T +
Sbjct: 227 CFQAFTIQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSH------- 279
Query: 275 RVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKM 333
E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I TE S ++
Sbjct: 280 ----------------ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQ 323
Query: 334 FHIQGCQEAVSLAQYLIN 351
I G +SLAQYLIN
Sbjct: 324 VTITGSPANISLAQYLIN 341
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/347 (38%), Positives = 184/347 (53%), Gaps = 64/347 (18%)
Query: 38 GCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCT 97
G V+++R+ESGA+I+I++G CP+RIVT++G D +
Sbjct: 6 GETVKKMREESGARINISEGNCPERIVTITGPTDA----------------------IFK 43
Query: 98 AYNFMCRSLEDYHINRNRMENC---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSG 154
A+ + E+ IN M N S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +G
Sbjct: 44 AFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 101
Query: 155 ANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA 214
A VQVA DMLP STER VT+ G PD I Q + QIC+V++E KGA IPY PK +
Sbjct: 102 AQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST 158
Query: 215 GPVILSGGQ-----------------------AYTLHGEYAVP------VQEVAGKKQPH 245
PVI +GGQ AYT+ G+YA+P + ++A ++ P
Sbjct: 159 -PVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPF 217
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
P G G + L G +S G D E+ + +D+ GC+IG+
Sbjct: 218 PPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELTIPNDLIGCIIGR 274
Query: 306 AGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 275 QGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 321
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/312 (40%), Positives = 173/312 (55%), Gaps = 48/312 (15%)
Query: 44 LRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMC 103
+ +SGA+I+I++G CP+RIVT++G D + A+ +
Sbjct: 20 MHGKSGARINISEGNCPERIVTITGPTDA----------------------IFKAFAMIA 57
Query: 104 RSLEDYHINRNRMEN---CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
E+ IN M N S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA
Sbjct: 58 YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA 115
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS 220
DMLP STER VT+ G PD I Q + QIC+V++E KGA IPY PK + PVI +
Sbjct: 116 GDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFA 171
Query: 221 GGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG 280
GGQAYT+ G+YA+P P L L L ++ T P L + G
Sbjct: 172 GGQAYTIQGQYAIP--------HPDQLTKLHQLAMQ---QTPFPP-----LGQTNPAFPG 215
Query: 281 KDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGC 339
D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G
Sbjct: 216 LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGT 275
Query: 340 QEAVSLAQYLIN 351
+SLAQYLIN
Sbjct: 276 PANISLAQYLIN 287
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 200/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCSAPANGGTVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ +Y V EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV GS S+ P G D G E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFGSPSMVP--------------GLDPGAQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPS 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLSTPFSPPLTA 337
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 129/350 (36%), Positives = 194/350 (55%), Gaps = 48/350 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
P + ++ A+ + L ED + S P+ L+LV+
Sbjct: 64 -----------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
V++E Q KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 165 VMLETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA- 219
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
+ + G+ S D E+ + +++ GC+IG+ G+
Sbjct: 220 -------------MQQSHFPMTHGNTGFSASLDASTQTTH-ELTIPNNLIGCIIGRQGAN 265
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ EIRQ+SGAQI I E S + I G ++SLAQYLIN + +K
Sbjct: 266 INEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 315
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 206 bits (525), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 138/386 (35%), Positives = 204/386 (52%), Gaps = 61/386 (15%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVT 65
D ++E+ +++ + E+ +IG G V+R+R++S A+I+I++G+CP+RI T
Sbjct: 42 DAGLEEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITT 101
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NC 119
++GS TA F S+ + ++ +
Sbjct: 102 ITGS---------------------------TAAVFHAVSMIAFKLDEDLCSAPANGGTV 134
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD
Sbjct: 135 SRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD 194
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEV 238
I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV
Sbjct: 195 AIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEV 250
Query: 239 AGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDI 298
+Q L+G AV S S+ P G D G E ++ +D+
Sbjct: 251 TKLQQ---LSGHAV----PFASPSMVP--------------GLDPGAQTSSQEFLVPNDL 289
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E
Sbjct: 290 IGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETA 349
Query: 358 KNNTTNTSDNPEPADLDAAISAFMTA 383
K+ + T + P DL A S +TA
Sbjct: 350 KSTSGGTPGS-APTDLSAPFSPPLTA 374
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 201/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GMDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLPTPFSPPLTA 337
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 201/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GLDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLPTPFSPPLTA 337
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 201/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GLDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLPTPFSPPLTA 337
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 205 bits (521), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 201/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GLDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E N+T+ +
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE-TANSTSGGTP 320
Query: 367 NPEPADLDAAISAFMTA 383
PADL S +TA
Sbjct: 321 GSAPADLPTPFSPPLTA 337
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 204 bits (520), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 201/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GLDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLPTPFSPPLTA 337
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 204 bits (518), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 189/365 (51%), Gaps = 78/365 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R++SGA+I+I++G CP+RIVT
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREDSGARINISEGNCPERIVTXX------- 64
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC---SPQPLQLKLVIP 131
+ A+ + E+ IN M N S P+ L+LV+P
Sbjct: 65 ---------------XXXXXIFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
A+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QIC+V
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----------------------AYTLH 228
++E KGA IPY PK + PVI SGGQ AYT+
Sbjct: 168 MLESP---PKGATIPYRPKPAST-PVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQ 223
Query: 229 GEYAVPVQEVAGKKQPHP-LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
G+YA+ PHP L+ L L ++ T TP L + G D +
Sbjct: 224 GQYAI----------PHPDLSKLHQLAMQ---QTPFTP-----LGQTTPAFPGLDASNQA 265
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S ++ I G +SLA
Sbjct: 266 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLA 325
Query: 347 QYLIN 351
QYLIN
Sbjct: 326 QYLIN 330
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/390 (34%), Positives = 200/390 (51%), Gaps = 80/390 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP----KGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 222
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 223 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 275
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 276 ---GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 332
Query: 336 IQGCQEAVSLAQYLINMCIELQKNNTTNTS 365
I G ++SLAQYLIN+ +E K ++ S
Sbjct: 333 ITGSAASISLAQYLINVSLENAKPSSQAAS 362
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 158/431 (36%), Positives = 222/431 (51%), Gaps = 68/431 (15%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ +G +DE L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDNG-LDEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 55
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRM 116
+CP+RI T++GS TG V A + + L ED
Sbjct: 56 SCPERITTITGS----------TGA------------VFHAVSMIAFKLDEDLCTGPPNG 93
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
+ S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G
Sbjct: 94 GSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRESTGAQVQVAGDLLPNSTERAVTVSG 153
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
PD I + QIC V++E KGA IPY P +++ G V+LS Q + A+ Q
Sbjct: 154 VPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSTNQVANI----AIQKQ 205
Query: 237 EVA----------GKKQPHPLAGLAVLGIEGIGSTSLTP--------AALAALSGSRVKS 278
E G QP L G +E + + S+ P + L LSG V
Sbjct: 206 ERGSNRQYHQVEHGSGQPGKLRGNGQEAVE-VAAVSMGPLPPPEPKVSKLQQLSGPPVPF 264
Query: 279 ------GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHK 331
G D G E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I TE S +
Sbjct: 265 TSPSVVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQTEGSGE 324
Query: 332 KMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIE 391
+ I G +++LAQYLI C+E K+ + T + P+DL A S + S +L
Sbjct: 325 RHVTITGSPVSIALAQYLITACLETAKSTSAGTPGS-GPSDLPAPFSPPLAPS--PALTA 381
Query: 392 KPTPHPGSMVT 402
PT PG + T
Sbjct: 382 LPTAPPGLLGT 392
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 130/378 (34%), Positives = 198/378 (52%), Gaps = 55/378 (14%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVT 65
DG ++ +T+R L H E+ +IG G V+++R+ESGA+I+I++G+ P+RIVT
Sbjct: 10 DGSLN--VTLTLRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSSPERIVT 63
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPL 124
++G + + A++ + + E D S P+
Sbjct: 64 ITGPTEG----------------------IFRAFSMIAQKFEEDITAAMTNSNVTSKPPV 101
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+LV P + CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G P I+Q
Sbjct: 102 TLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQC 161
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAGP-VILS---GGQAYTLHGEYAVPVQEVAG 240
+ IC V++E KGA IPY PK + AG +L+ A+ + G+YA Q+
Sbjct: 162 VRHICSVMLESP---PKGATIPYRPKILPAGAHAVLAPQHSAHAFAIPGQYAFAHQD--- 215
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAG 300
L L L ++ I L +L S G D+ E+ + +D+ G
Sbjct: 216 ------LTKLHQLAMQHI--------PLPSLGQSNPTFPGLDSSASTSTQELAIPNDLIG 261
Query: 301 CVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
C+IG+ GS++ EIRQ+SGA I I + T+ S + I G ++S+AQYLIN +E+ +
Sbjct: 262 CIIGRQGSKINEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLINASLEMAR- 320
Query: 360 NTTNTSDNPEPADLDAAI 377
T + + P DL+ +
Sbjct: 321 YTMQAAASSTPVDLNMSF 338
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 138/377 (36%), Positives = 200/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++ KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILGSP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GLDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLPTPFSPPLTA 337
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 149/408 (36%), Positives = 213/408 (52%), Gaps = 60/408 (14%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R + H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDPGLEEEPELSITLTLRMIMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRM 116
+CP+RI T++GS TG H A + + L ED
Sbjct: 57 SCPERITTITGS----------TGAVFH------------AVSMIAFKLDEDLCTGPPNG 94
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
+ S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G
Sbjct: 95 GSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA-VPV 235
PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y V
Sbjct: 155 VPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGTVTP 210
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT 295
EV+ +Q L+G V S S+ P G D E ++
Sbjct: 211 AEVSKLQQ---LSGHPV----PFASPSVVP--------------GLDPSAQTSSQEFLVP 249
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+D+ GCVIG+ GS++ EIRQ+SGA I I E S ++ I G +++LAQYLI C+
Sbjct: 250 NDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGSGERHVTITGSPVSIALAQYLITACL 309
Query: 355 ELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVT 402
E K+ + T + ADL A S + S +L P PG + T
Sbjct: 310 ETAKSTSGGTPGSGT-ADLSAPFSPPLAPS--PALTALPAAPPGLLGT 354
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 195/378 (51%), Gaps = 77/378 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 26 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 75
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 76 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 119
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 120 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 179
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ----------------------------- 223
E Q KG IPY PK ++ PVI +GGQ
Sbjct: 180 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 238
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 239 LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA----- 292
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMF 334
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 293 ----GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 348
Query: 335 HIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 349 TITGSAASISLAQYLINV 366
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 195/378 (51%), Gaps = 77/378 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ----------------------------- 223
E Q KG IPY PK ++ PVI +GGQ
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 226
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 227 LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA----- 280
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMF 334
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 281 ----GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 336
Query: 335 HIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 337 TITGSAASISLAQYLINV 354
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 200 bits (509), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 196/374 (52%), Gaps = 82/374 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A++ + LE D + S P+ L+LV+PA+
Sbjct: 68 --------------------IFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAV 223
Query: 224 ----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
AYT+ G+YA+P QP L L L ++ S P + SG+ SG
Sbjct: 224 DLHGAYTIQGQYAIP--------QPD-LTKLHQLAMQ----QSHFP---MSHSGNTGFSG 267
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S+ + I G
Sbjct: 268 GIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Query: 339 CQEAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 328 STASISLAQYLINV 341
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 196/374 (52%), Gaps = 82/374 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A++ + LE D + S P+ L+LV+PA+
Sbjct: 68 --------------------IFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAV 223
Query: 224 ----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
AYT+ G+YA+P QP L L L ++ S P + SG+ SG
Sbjct: 224 DLHGAYTIQGQYAIP--------QPD-LTKLHQLAMQ----QSHFP---MSHSGNTGFSG 267
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S+ + I G
Sbjct: 268 GIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Query: 339 CQEAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 328 STASISLAQYLINV 341
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/375 (34%), Positives = 195/375 (52%), Gaps = 77/375 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----------------------------A 224
E KG IPY PK ++ PVI +GGQ A
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEA 223
Query: 225 YTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS 278
YT+ G+YA+P + ++A ++ P++ G G+ S+S A
Sbjct: 224 YTIQGQYAIPQPDLTKLHQLAMQQSHFPMS-HGNTGFSGVESSSPDEKGYWA-------- 274
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQ 337
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I
Sbjct: 275 -GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Query: 338 GCQEAVSLAQYLINM 352
G ++SLAQYLIN+
Sbjct: 334 GSAASISLAQYLINV 348
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 196/378 (51%), Gaps = 77/378 (20%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ--------------------------- 223
V++E KG IPY PK ++ PVI +GGQ
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P++ G GI S+S A
Sbjct: 221 QEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSH-GNTGFSGIESSSPEVKGYWA----- 274
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMF 334
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 275 ----GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 330
Query: 335 HIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 331 TITGSAASISLAQYLINV 348
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 134/374 (35%), Positives = 196/374 (52%), Gaps = 82/374 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A++ + LE D + S P+ L+LV+PA+
Sbjct: 68 --------------------IFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAV 223
Query: 224 ----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
AYT+ G+YA+P QP L L L ++ S P + SG+ SG
Sbjct: 224 DLHGAYTIQGQYAIP--------QPD-LTKLHQLAMQ----QSHFP---MSHSGNTGFSG 267
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S+ + I G
Sbjct: 268 GIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITG 327
Query: 339 CQEAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 328 STASISLAQYLINV 341
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 139/389 (35%), Positives = 206/389 (52%), Gaps = 52/389 (13%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIV 64
GDG + +T+R L H E+ +IG G V+R+R+ES A+I+I++G+CP+RI+
Sbjct: 120 GDGAMG--VTLTLRLLMHG----KEVGSIIGKKGETVKRIREESSARINISEGSCPERII 173
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCSPQ 122
T++G D V A+ + LE+ + N P
Sbjct: 174 TITGPTDC----------------------VFRAFTMITFKLEEDLMALVANGTVTSKP- 210
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LVIPA+ CGSLIGKGG KIK+IR+ +GA VQVA D+LP STER VT+ G+ D I
Sbjct: 211 PVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGSQDAII 270
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG-- 240
Q + IC V++E KGA IPY P + G V+L+G Q + + P+ VA
Sbjct: 271 QCVKLICTVILESP---PKGATIPYRP-SPTPGTVLLAGNQVFEASDFGSHPLFSVAQGG 326
Query: 241 -------KKQPH---PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
Q H P + LA L + L P + +A ++V GG +
Sbjct: 327 VDLQQTYAVQSHYGIPHSELAKLHQLSMQQQGLAPISQSA---TQVLPGGVEANSQTTSQ 383
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES-HKKMFHIQGCQEAVSLAQYL 349
E+++ +D+ G +IG+ G+++ EIRQ+SGAQI I + +S + I G A++LAQYL
Sbjct: 384 ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTISGTPIAINLAQYL 443
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAIS 378
I C+E K +T +S P P DL + +
Sbjct: 444 ITSCLETAK-STAQSSSMPSPVDLTMSFT 471
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 196/379 (51%), Gaps = 80/379 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ----------------------------- 223
E Q KG IPY PK ++ PVI +GGQ
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 226
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P+ G GI S+S
Sbjct: 227 LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSS-----------PE 274
Query: 276 VKS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKM 333
VK G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 275 VKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 334
Query: 334 FHIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 335 VTITGSAASISLAQYLINV 353
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/394 (35%), Positives = 207/394 (52%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+ +RI T++GS TA F S+ + ++ +
Sbjct: 57 SFLERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIG+ G KIK+IR+ +GA VQVA D+ P STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV +EV +Q L+ AV + S+ P G D G
Sbjct: 206 GAVTQREVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 337
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 129/372 (34%), Positives = 191/372 (51%), Gaps = 78/372 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ----------------------------- 223
E Q KG IPY PK ++ PVI +GGQ
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 226
Query: 224 --AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK 281
AYT+ G+YA+P ++ + H LA + + G+ S G
Sbjct: 227 LEAYTIQGQYAIPQPDLT---KLHQLA--------------MQQSHFPMTHGNTGFSAGL 269
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSA 329
Query: 341 EAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 330 ASISLAQYLINV 341
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/369 (35%), Positives = 195/369 (52%), Gaps = 67/369 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S A G D
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWA---------GLDAS 277
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAV 343
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G ++
Sbjct: 278 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASI 337
Query: 344 SLAQYLINM 352
SLAQYLIN+
Sbjct: 338 SLAQYLINV 346
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 132/379 (34%), Positives = 197/379 (51%), Gaps = 80/379 (21%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ--------------------------- 223
V++E KG IPY PK ++ PVI +GGQ
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPP 220
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P++ G GI S+S
Sbjct: 221 QEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSH-GNTGFSGIESSS-----------PE 268
Query: 276 VKS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKM 333
VK G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 269 VKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 328
Query: 334 FHIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 329 VTITGSAASISLAQYLINV 347
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 194/377 (51%), Gaps = 79/377 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 224 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 276
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 277 ---GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 333
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 334 ITGSAASISLAQYLINV 350
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/381 (34%), Positives = 197/381 (51%), Gaps = 55/381 (14%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRI 63
+ DG ++ +T+R L H E+ +IG G V+++R+ESGA+I+I++G+ P+RI
Sbjct: 8 SSDGSLN--VTLTLRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGSSPERI 61
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQ 122
VT++G+ + + A+ + + E D + S
Sbjct: 62 VTITGATEA----------------------IFRAFAMIAQKFEEDISAAMSNSSVTSKP 99
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LV P + CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G P I+
Sbjct: 100 PVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAIT 159
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAG-PVILSGGQ---AYTLHGEYAVPVQEV 238
Q + IC V++E KGA IPY PK + G +L+ Q A+ + G+Y Q+
Sbjct: 160 QCVRHICSVMLESP---PKGATIPYRPKAVTVGVHAVLAPQQSAHAFAIPGQYTFAHQD- 215
Query: 239 AGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDI 298
L L L ++ I L +L S G D E+ + +D
Sbjct: 216 --------LTKLHQLAMQHI--------PLPSLGQSNPTFPGLDPSAPTSSQEMAIPNDF 259
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
GC+IG+ GS++ EIRQ+SGA I I + T+ S + I G ++++AQYLIN +E+
Sbjct: 260 IGCIIGRQGSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQYLINASLEMA 319
Query: 358 KNNTTNTSDNPEPADLDAAIS 378
K T + + P DL+ S
Sbjct: 320 K-YTMQAASSATPVDLNLGFS 339
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 194/377 (51%), Gaps = 79/377 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 224 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 276
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 277 ---GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 333
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 334 ITGSAASISLAQYLINV 350
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 126/343 (36%), Positives = 186/343 (54%), Gaps = 50/343 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK ++ PVI +GGQ LH ++A ++ P+
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQLTKLH--------QLAMQQSHFPMTH- 211
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
G GI S+S A G D E+ + +D+ GC+IG+ G+++
Sbjct: 212 GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCIIGRQGAKI 262
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 263 NEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 305
>gi|328724001|ref|XP_001949471.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 443
Score = 199 bits (505), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/447 (31%), Positives = 225/447 (50%), Gaps = 83/447 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D +TMR L ++ E+ +IG GG + SGAK+ I+ G + IV+++G+ +
Sbjct: 25 DVKLTMRIL----IDRREVRNVIGKGG-------ESSGAKVLISGGQTRESIVSITGTTN 73
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+C A + +E++ +N L LKL++P
Sbjct: 74 A----------------------ICKATELIGLKVEEFF----ERQNGPKAFLTLKLIVP 107
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ CG +IGKGGCKIK+IR+ SGA +QVA DMLP STER+V++ G TISQ +YQ+C V
Sbjct: 108 ISQCGFIIGKGGCKIKEIRESSGAAIQVALDMLPNSTERLVSITGTTGTISQCVYQVCNV 167
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
++ + A IPY+P+ G + G + G++ +PLA LA
Sbjct: 168 ILNSP---SRKATIPYDPRRKTLGFASSAVGTDF--------------GRQCINPLASLA 210
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGK------------DTGDDFVETEIVLTDDIA 299
LG+ + + S+ PA LAAL+GS++++G + ++ + + + + +
Sbjct: 211 ALGLGTVSTGSINPATLAALAGSQLRTGNRQNRNGGGEHKNQNSNSNSETISMTVPNVLI 270
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESHK------KMFHIQGCQEAVSLAQYLINMC 353
GCVIG+ GS++ EI+Q+SGA + I G +H+ + I G ++++S+A+YLI M
Sbjct: 271 GCVIGRRGSKIAEIKQLSGALVYIAKGERTHENGENEDRQITITGNKDSISVAKYLIEMS 330
Query: 354 IELQKNNTTNTSDNPE---------PADLDAAISAFMTASVNSSLIEKP--TPHPGSMVT 402
+ELQK N + + P A S +A + L KP S+
Sbjct: 331 VELQKANLEGANSSSSPDDESSSALPTPPTVAASPLSSAITLAELFAKPGVINALSSLSA 390
Query: 403 LGGLSELLANIAASNVKSTVQTTGAYR 429
LGGL++ L + +N S +QTTG +R
Sbjct: 391 LGGLTDFLGALFGANQSSPMQTTGFHR 417
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 132/384 (34%), Positives = 195/384 (50%), Gaps = 80/384 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
AYT+ G+YA+P QP L L L ++ + G+ S G D
Sbjct: 224 EAYTIQGQYAIP--------QPD-LTKLHQLAMQQ--------SHFPMTHGNTGFSAGLD 266
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EI Q+SGAQI I E S + I G
Sbjct: 267 ASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVEGSTDRQVTITGSAA 326
Query: 342 AVSLAQYLINMCIELQKNNTTNTS 365
++SLAQYLIN+ +E K ++ S
Sbjct: 327 SISLAQYLINVSLENAKPSSQAAS 350
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 198 bits (504), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/361 (35%), Positives = 192/361 (53%), Gaps = 50/361 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTN 66
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
+ A++ + LE D + S P+ L+LV+
Sbjct: 67 A----------------------IFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK ++ PVI +GGQ G +A G++ L
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSL 220
Query: 251 AVLGIEGI----GSTSLTPAALAAL--------------SGSRVKSGGKDTGDDFVETEI 292
+ + G G ++ L L SG+ SGG D E+
Sbjct: 221 DAVDLHGAYIIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTTSHEL 280
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I E S+ + I G ++SLAQYLIN
Sbjct: 281 TIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTITGSTASISLAQYLIN 340
Query: 352 M 352
+
Sbjct: 341 V 341
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 195/378 (51%), Gaps = 82/378 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 26 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 75
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 76 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 119
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 120 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 179
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 180 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 235
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S V
Sbjct: 236 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSS-----------PEV 283
Query: 277 KS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMF 334
K G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 284 KGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 343
Query: 335 HIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 344 TITGSAASISLAQYLINV 361
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 132/378 (34%), Positives = 195/378 (51%), Gaps = 82/378 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S V
Sbjct: 224 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSS-----------PEV 271
Query: 277 KS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMF 334
K G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 272 KGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 331
Query: 335 HIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 332 TITGSAASISLAQYLINV 349
>gi|328716031|ref|XP_001944817.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 415
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/420 (36%), Positives = 229/420 (54%), Gaps = 59/420 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++T+R L EI LIG G +VR LR +S A I+ITD + P+RIVTV+G+++
Sbjct: 18 DVVLTIRILMG-----KEILPLIGEYGEVVRDLRNQSEATITITDSSTPERIVTVTGNIN 72
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED---YHINRNRMENCSPQPLQLKL 128
+ A+ + + LE H+ +R + S +KL
Sbjct: 73 I----------------------IQKAFALITKILEQNSPTHLQNSR-KPSSNNSTTIKL 109
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
++PA+ CGSLIGKGG KI++IR+ SGA V VASD+L STER V++ G + I++AI+QI
Sbjct: 110 IVPASQCGSLIGKGGVKIREIREASGAMVNVASDLLQNSTERTVSISGTAEAITEAIHQI 169
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV--QEVAGKKQPHP 246
C+V++E +G + Y P GPV+L GGQAYTL G A+P + A +
Sbjct: 170 CIVMLETP---GRGPTVAYRPFVSQPGPVVLCGGQAYTLQGSLAIPAVGDQTASNAALNT 226
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG--KDTGDDFVETEIVLTDDIAGCVIG 304
+A +A I G G L P+ LAAL+GS+++ GG T + E+ + +DI GC+IG
Sbjct: 227 IASIAPNLIAGSG---LDPSVLAALAGSQLRGGGVSSKTSQQHITHEMAIPNDIIGCIIG 283
Query: 305 KAGSRLLEIRQISGAQINIHTGTESH------KKMFHIQGCQEAVSLAQYLINMCIELQK 358
K G+++ EIR+ISGA I I + TE H ++ I G +AV++A+ LIN+ ++ Q
Sbjct: 284 KGGTKIAEIRRISGAMIRI-SNTEEHEASGKMERAITISGQADAVNVAKTLINLSVD-QY 341
Query: 359 NNTTNTSDNPEPADLDAAISAFMTASVN--SSLIEKPTPHP---GSMVTLGGLSELLANI 413
N ++ E D D + TA + + +P G++ L GL ELL +I
Sbjct: 342 NKSSG-----ESVDYDEEFPSNFTADAKTTTETLATLLSNPNGLGALGALTGLKELLGSI 396
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 197 bits (502), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 190/369 (51%), Gaps = 78/369 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----------------------------A 224
E KG IPY PK ++ PVI +GGQ A
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEA 223
Query: 225 YTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
YT+ G+YA+P ++ + H LA + + G+ S G D
Sbjct: 224 YTIQGQYAIPQPDLT---KLHQLA--------------MQQSHFPMSHGNTGFSAGLDAS 266
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAV 343
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G ++
Sbjct: 267 AQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASI 326
Query: 344 SLAQYLINM 352
SLAQYLIN+
Sbjct: 327 SLAQYLINV 335
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 190/371 (51%), Gaps = 80/371 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
AYT+ G+YA+P ++ + H LA + + G+ S G D
Sbjct: 224 EAYTIQGQYAIPQPDLT---KLHQLA--------------MQQSHFPMTHGNTGFSAGLD 266
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 267 ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 326
Query: 342 AVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 327 SISLAQYLINV 337
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 197 bits (501), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 127/344 (36%), Positives = 187/344 (54%), Gaps = 53/344 (15%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVI 130
+ + A+ + L ED + S P+ L+LV+
Sbjct: 64 -------------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK ++ PVI +GGQ LH ++A ++ P+
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SSSPVIFAGGQLTKLH--------QLAMQQSHFPMTH- 211
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
G GI S+S VK G D E+ + +D+ GC+IG+ G++
Sbjct: 212 GNTGFSGIESSS-----------PEVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAK 260
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 261 INEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 304
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 193/377 (51%), Gaps = 79/377 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 224 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 276
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI E S +
Sbjct: 277 ---GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVT 333
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 334 ITGSAASISLAQYLINV 350
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 128/371 (34%), Positives = 190/371 (51%), Gaps = 80/371 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
AYT+ G+YA+P ++ + H LA + + G+ S G D
Sbjct: 224 EAYTIQGQYAIPQPDLT---KLHQLA--------------MQQSHFPMTHGNTGFSAGLD 266
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 267 ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 326
Query: 342 AVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 327 SISLAQYLINV 337
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 121/342 (35%), Positives = 188/342 (54%), Gaps = 41/342 (11%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG--- 63
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
P ++ A++ + LE D + S P+ L++V+
Sbjct: 64 -----------PTTAIF--------KAFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G +I + + QIC+
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTAHSIIECVKQICV 164
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
V++E KG IPY PK + PVI +GGQAY + G++A+P + + L+ L
Sbjct: 165 VMLESP---PKGVTIPYRPKP-SGSPVIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSKL 220
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
L ++ P +A + G D E+ + +D+ GC+IG+ G+++
Sbjct: 221 HQLAMQ------QGPFPMATCNQGFT---GMDASAQACSHEMTIPNDLIGCIIGRQGAKI 271
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
EIRQ+SGAQI I + S + I G ++ LA+YLI
Sbjct: 272 SEIRQMSGAQIKIANPVDGSTDRQVTITGSPASIGLAEYLIK 313
>gi|426249910|ref|XP_004018689.1| PREDICTED: poly(rC)-binding protein 4 [Ovis aries]
Length = 425
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 189/351 (53%), Gaps = 61/351 (17%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
V+R+R++S A+I+I++G+CP+RI T++GS TA
Sbjct: 62 VKRIREQSSARITISEGSCPERITTITGS---------------------------TAAV 94
Query: 101 FMCRSLEDYHINRNRME------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSG 154
F S+ + ++ + N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +G
Sbjct: 95 FHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 154
Query: 155 ANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA 214
A VQVA D+LP STER VTV G PD I + QIC V++E KGA IPY P +++
Sbjct: 155 AQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSL 210
Query: 215 GPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSG 273
G V+LS Q +++ G+Y AV EV +Q L+G AV S S+ P
Sbjct: 211 GTVLLSTNQGFSVQGQYGAVTPAEVTKLQQ---LSGHAVP----FASPSMVP-------- 255
Query: 274 SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKK 332
G D E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++
Sbjct: 256 ------GLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 309
Query: 333 MFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I G +++LAQYLI C+E K+ + T + P DL A S +TA
Sbjct: 310 HVTITGSPVSIALAQYLITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 359
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 189/371 (50%), Gaps = 80/371 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
AYT+ G+YA+P ++ + H LA + + G+ S G D
Sbjct: 224 EAYTIQGQYAIPQPDLT---KLHQLA--------------MQQSHFPMTHGNTGFSAGLD 266
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI E S + I G
Sbjct: 267 ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTITGSAA 326
Query: 342 AVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 327 SISLAQYLINV 337
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 73/359 (20%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E AYT+ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLE-----------------------------AYTIQGQYAIPHPDLT 184
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 185 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELT 241
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 242 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 300
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 195 bits (496), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 189/371 (50%), Gaps = 80/371 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
AYT+ G+YA+P ++ + H LA + + G+ S G D
Sbjct: 224 EAYTIQGQYAIPQPDLT---KLHQLA--------------MQQSHFPMTHGNTGFSAGLD 266
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+I + G+++ EIRQ+SGAQI I E S + I G
Sbjct: 267 ASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 326
Query: 342 AVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 327 SISLAQYLINV 337
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 195 bits (496), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/400 (34%), Positives = 208/400 (52%), Gaps = 67/400 (16%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIV 64
GDG + +T+R L H E+ +IG G V+R+R+ES A+++I++G+CP+RI+
Sbjct: 19 GDGGLG--VTLTLRLLMHG----KEVGSIIGKKGETVKRIREESSARVNISEGSCPERII 72
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCSPQ 122
T++GS D+ V A+ + LE+ + N + P
Sbjct: 73 TITGSTDS----------------------VFRAFTMITYKLEEDLTALVANGTISSKP- 109
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LVIPA+ CGSLIGKGG KIK+IR+ +GA +QVA D+LP STER VT+ GN D++
Sbjct: 110 PVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSVI 169
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVI-------------------LSGG- 222
Q + IC V++E KGA IPY P A +I GG
Sbjct: 170 QCVKLICTVILESP---PKGATIPYRPTPSPAALLIAGNQVFEASDFAPHPLYSVTQGGL 226
Query: 223 ---QAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
QAY L +Y +P E+A Q GL+ + ++++ P L + SG
Sbjct: 227 DLQQAYALQNQYGIPHSELAKLHQLSVQQGLSPIAQP---ASTIMPGKLLL---HFLPSG 280
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
T E+++ +D+ G +IG+ G+++ EIRQ+SGAQI I + + + + I G
Sbjct: 281 MDSTSQ--TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITG 338
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
+++LAQYLI C+E K +T + P P DL+ A +
Sbjct: 339 TPVSINLAQYLITSCLETAK-STAQAATMPSPVDLNMAFT 377
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 73/359 (20%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E AYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLE-----------------------------AYTIQGQYAIPHPDLT 216
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 217 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELT 273
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 274 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 332
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 194 bits (494), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 131/384 (34%), Positives = 192/384 (50%), Gaps = 88/384 (22%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H G G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMH------------GKKGESVKKMREESGARINISEGNCPERIITLAG------ 55
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 56 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASKPPVTLRLVVPAS 99
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 100 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 159
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 160 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 215
Query: 224 -AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
AYT+ G+YA+P QP L L L ++ + G+ S G D
Sbjct: 216 EAYTIQGQYAIP--------QPD-LTKLHQLAMQQ--------SHFPMTHGNTGFSAGLD 258
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 259 ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAA 318
Query: 342 AVSLAQYLINMCIELQKNNTTNTS 365
++SLAQYLIN+ +E K ++ S
Sbjct: 319 SISLAQYLINVSLENAKPSSQAAS 342
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 126/361 (34%), Positives = 190/361 (52%), Gaps = 53/361 (14%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R + E +IG G V++ R++SGAKI+I+D +CP+RIVTV+G+ D
Sbjct: 1 MVTLRMIMQG----KEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQ- 55
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ +C+ E+ +N + P+ L+L++PA+
Sbjct: 56 ---------------------IFKAFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPAS 94
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGG KIK+IR+L+GA++QVAS+MLP STER VTV G D I+Q IY IC V++
Sbjct: 95 QCGSLIGKGGAKIKEIRELTGASIQVASEMLPNSTERAVTVSGQADAITQCIYNICCVML 154
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILS---GGQAYTLHGEYAVPVQEVAGKKQPH----- 245
E KGA IPY PK PV+L GGQA+++ G+ + QP
Sbjct: 155 ESP---PKGATIPYRPKPC-VPPVMLPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHC 210
Query: 246 -PLAGLAVLGIEGIGST---------SLTPAALAALSGSRVKSGGKDTG---DDFVET-E 291
PL + + T + P AA++ + + G + +T E
Sbjct: 211 VPLPPPCFISLRARLQTHSLICIIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQTHE 270
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ + +D+ GC+IG+ G+++ EIRQ+SGA I I E S + I G E + AQY+I
Sbjct: 271 MTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDRKVTIMGSLETIHAAQYMI 330
Query: 351 N 351
N
Sbjct: 331 N 331
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 194 bits (493), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 128/359 (35%), Positives = 184/359 (51%), Gaps = 73/359 (20%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E AYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLE-----------------------------AYTIQGQYAIPHPDLT 216
Query: 235 -VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 217 KLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHELT 273
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 274 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 332
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 134/386 (34%), Positives = 200/386 (51%), Gaps = 82/386 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 26 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 75
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 76 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 119
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 120 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 179
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ----------------------------- 223
E Q KG IPY PK ++ PVI +GGQ
Sbjct: 180 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 238
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P+ G GI S+S
Sbjct: 239 LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSS-----------PE 286
Query: 276 VKSGGKDTGDDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKK 332
VK G + D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S +
Sbjct: 287 VK-GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 345
Query: 333 MFHIQGCQEAVSLAQYLINMCIELQK 358
I G ++SLAQYLIN + +K
Sbjct: 346 QVTITGSAASISLAQYLINARLSSEK 371
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ GS + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 200/391 (51%), Gaps = 74/391 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ES A+I+I++G+CP+RI+T++G+ +
Sbjct: 5 LTLRLLMHG----KEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGATEC-- 58
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCSPQPLQLKLVIPA 132
V A+ + LE+ + N P P+ L+LVIPA
Sbjct: 59 --------------------VFRAFTMITIKLEEDLAALVANGTVTSKP-PVTLRLVIPA 97
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ CGSLIGKGG KIK+IR+ +GA VQVA D+LP STER VT+ G+ D I Q + IC V+
Sbjct: 98 SQCGSLIGKGGSKIKEIREKTGAQVQVAGDLLPNSTERGVTISGSQDAIIQCVKLICTVI 157
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGG------------------------QAYTLH 228
+E KGA IPY P G V+L+G QAYT+
Sbjct: 158 LESP---PKGATIPYRPSPA-PGAVLLAGNQVFETSEFASHPLFSVAQGGLDLQQAYTVQ 213
Query: 229 GEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
+Y +P E+A Q GL +A + ++V G ++
Sbjct: 214 NQYGIPHSELAKLHQLSMQQGL---------------GPIAQATATQVLPAGIESSSQTA 258
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES-HKKMFHIQGCQEAVSLAQ 347
E+++ +D+ G +IG+ G+++ EIRQ+SGAQI I + +S + I G +++LAQ
Sbjct: 259 SQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRHVTITGSPISINLAQ 318
Query: 348 YLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
YLI C+E K +T +S P DL+ + +
Sbjct: 319 YLITSCLETAK-STAQSSSMSTPVDLNMSFT 348
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/388 (34%), Positives = 203/388 (52%), Gaps = 74/388 (19%)
Query: 7 GKIDEDT----LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
G +DE+ +T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+R
Sbjct: 101 GGLDEENELNVTLTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPER 156
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
I+T++G + + A+ + LE D + + S
Sbjct: 157 IITLTGPTNA----------------------IFKAFAMIIDKLEEDINSSMTNSTAASR 194
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PAT CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++
Sbjct: 195 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSV 254
Query: 182 SQAIYQICLVLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ---------------- 223
++ + QICLV++E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 255 TECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDL 313
Query: 224 ------AYTLHGEYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTS-LTPAALAAL 271
AY++ G++ + ++A ++Q H G GI S+S A+L
Sbjct: 314 EGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASL 373
Query: 272 SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
S + E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S
Sbjct: 374 DASTQTT-----------HELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSS 422
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ I G ++SLAQYLIN + +K
Sbjct: 423 GRQVTITGSAASISLAQYLINARLSSEK 450
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 198/377 (52%), Gaps = 58/377 (15%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDN 72
+L+T+R + E+ +IG G +++ R++SGAKI+I+DG+CP+RIVTV+G+ +
Sbjct: 10 SLLTVRMIMQG----KEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTTEC 65
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
+ A+ +C+ E+ N + P+ L+LV+PA
Sbjct: 66 ----------------------IHKAFTMICKKFEEDLQNTPTVPK---PPVTLRLVVPA 100
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ CGSLIGKGG KIK+IR+ +GA++QVAS+MLP STER VTV G D I+ I IC ++
Sbjct: 101 SQCGSLIGKGGSKIKEIRETTGASIQVASEMLPNSTERAVTVSGTADAITLCIQNICSIM 160
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE-----------YAVPVQEVAGK 241
+E KGA I Y PK + PVI +GGQAYT+ G+ +P E++
Sbjct: 161 LESP---PKGATIQYRPKPV-VPPVIFAGGQAYTVPGQMQGVQASEKERLGIPKMELSKL 216
Query: 242 K-----QPHPL-----AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
QP P+ L + G+ + AA + + ++ TE
Sbjct: 217 HQLSLGQPIPIIPCTSPQLIQATMPGLPHMA---AAYPRATNTVPQALPAQPQQQQTTTE 273
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ + +D+ GC+IG+ G ++ EIRQ+SGA I I E + + I G E + LAQYLI
Sbjct: 274 MAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGAPDRKVTITGTPETIGLAQYLI 333
Query: 351 NMCIELQKNNTTNTSDN 367
N +EL K T + S +
Sbjct: 334 NTSMELHKTLTLDPSSS 350
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 61/115 (53%), Gaps = 9/115 (7%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G +IG+GG KI +IR +SGA +++ S+ + +R VT+ G P+TI A Y
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKI-SNAEEGAPDRKVTITGTPETIGLAQY 331
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGK 241
LI ++++ K + T N P + S + H A+P+ ++A K
Sbjct: 332 -----LINTSMELHKTLTLDPSSSTQNTTPTLTS---VQSQHAPMAIPISQLAMK 378
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/355 (35%), Positives = 191/355 (53%), Gaps = 57/355 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL-QLKLVIPAT 133
+ A+ + LE+ + + +PL L+LV+PA+
Sbjct: 68 --------------------IFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + IC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKHICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------AYTLHGEYAVP------VQEV 238
E KG IPY PK ++ PVI +GGQ AYT+ G+YA+P + ++
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDKAYTIQGQYAIPQPDLTKLHQL 223
Query: 239 AGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDI 298
A ++ P+ G GI S+S A G D E+ + +D+
Sbjct: 224 AVQQSHFPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDL 273
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
GC+IG G+++ EI Q+SGA I I E S + I G ++SLAQYLIN+
Sbjct: 274 IGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTITGSAASISLAQYLINV 328
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 199/377 (52%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S P +G
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS--PEVKGYWAGL---------- 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 135/391 (34%), Positives = 203/391 (51%), Gaps = 76/391 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ES A+++I++G+CP+RI+T++GS D
Sbjct: 16 LTLRLLMHG----KEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDC-- 69
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCSPQPLQLKLVIPA 132
V A+ + LE+ + N + P P+ L+LVIPA
Sbjct: 70 --------------------VFRAFTMITHKLEEDLAALVANGTISTKP-PVTLRLVIPA 108
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ CGSLIGKGG KIK+IR+ +GA +QVA D+LP STER VT+ GN D++ Q + IC V+
Sbjct: 109 SQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSVIQCVKLICTVI 168
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGG------------------------QAYTLH 228
+E KGA IPY P A V+++G QAYTL
Sbjct: 169 LESP---PKGATIPYRPSPSPAA-VLIAGNQLFDASEFATHPMYSVAQGGLDLQQAYTLQ 224
Query: 229 GEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
+Y +P E LA L L ++ L P A A S V G D+
Sbjct: 225 NQYGIPHSE---------LAKLHQLSMQ----QGLNPIAQPA---STVIPAGMDSNSQTS 268
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQ 347
+ E+++ +D+ G +IG+ G+++ EIRQ+SGAQI I + + + + I G +++LAQ
Sbjct: 269 Q-ELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDRHVTITGTPVSINLAQ 327
Query: 348 YLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
YLI C+E K +T + P DL+ A +
Sbjct: 328 YLITSCLETAK-STAQAATLAAPVDLNMAFT 357
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 201/380 (52%), Gaps = 72/380 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 20 NVTLTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTN 75
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
+ A+ + LE D + + S P+ L+LV+
Sbjct: 76 A----------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVV 113
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PAT CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICL
Sbjct: 114 PATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICL 173
Query: 191 VLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYT 226
V++E Q +G V IPY+P ++ PVI +GGQ AY+
Sbjct: 174 VMLETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYS 232
Query: 227 LHGEYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK 281
+ G++ + ++A ++Q H G GI S+S VK G
Sbjct: 233 IQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYW 280
Query: 282 DTGDDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
+ D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 281 ASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITG 340
Query: 339 CQEAVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 341 SAASISLAQYLINARLSSEK 360
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 129/360 (35%), Positives = 190/360 (52%), Gaps = 43/360 (11%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQAYTLHGE------YAVPVQEVAGKKQPHP 246
E Q KG IPY PK ++ PVI +GGQ G + P + + P
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 226
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG-----DDFVET--EIVLTDDIA 299
L + G I LT A+ S +TG D +T E+ + +++
Sbjct: 227 LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLI 286
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
GC+IG+ G+ + EIRQ+SGAQI I E S + I G ++SLAQYLIN + +K
Sbjct: 287 GCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 346
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/380 (34%), Positives = 201/380 (52%), Gaps = 72/380 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 171 NVTLTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTN 226
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVI 130
+ A+ + LE D + + S P+ L+LV+
Sbjct: 227 A----------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVV 264
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
PAT CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICL
Sbjct: 265 PATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICL 324
Query: 191 VLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYT 226
V++E Q +G V IPY+P ++ PVI +GGQ AY+
Sbjct: 325 VMLETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYS 383
Query: 227 LHGEYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK 281
+ G++ + ++A ++Q H G GI S+S VK G
Sbjct: 384 IQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYW 431
Query: 282 DTGDDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
+ D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 432 ASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITG 491
Query: 339 CQEAVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 492 SAASISLAQYLINARLSSEK 511
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 13 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 66
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 67 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 106
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 107 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 166
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 167 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 225
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 226 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 273
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 274 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQITITGSAA 333
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 334 SISLAQYLINARLSSEK 350
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 23 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 76
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 77 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 116
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 117 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 176
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 177 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 235
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 236 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 283
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 284 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 343
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 344 SISLAQYLINARLSSEK 360
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 130/366 (35%), Positives = 185/366 (50%), Gaps = 87/366 (23%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
IVT++G D ++ + AY F ED + + S
Sbjct: 58 IVTITGPTD-----AIFKAF------------AMIAYKFE----EDITNSMSNSTATSKP 96
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 97 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 156
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
Q + QIC+V++E AYT+ G+YA+P
Sbjct: 157 QCVKQICVVMLE-----------------------------AYTIQGQYAIP-------- 179
Query: 243 QPHP-LAGLAVLGIEGIGSTSLTP--AALAALSGSRV-------------KSGGKDTGDD 286
HP L L L ++ T TP A G ++ +S G D
Sbjct: 180 --HPDLTKLHQLAMQ---QTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPP 234
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSL 345
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SL
Sbjct: 235 ASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 294
Query: 346 AQYLIN 351
AQYLIN
Sbjct: 295 AQYLIN 300
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 13 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 66
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 67 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 106
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 107 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 166
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 167 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 225
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 226 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 273
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 274 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 333
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 334 SISLAQYLINARLSSEK 350
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 32/230 (13%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 13 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 68
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS--PQP-LQL 126
++ + A+ +C+ E++ + ++ P+P + L
Sbjct: 69 TNS----------------------IFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITL 106
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVASDMLP STER VT+ G + I+Q IY
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSEAITQCIY 166
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP
Sbjct: 167 HICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH 213
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLA 346
E+ + +++ GC+IGK G+++ EIRQISGA I I E + I G +AVSLA
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLA 428
Query: 347 QYLINMCIELQKNN 360
QYLI+M +ELQK N
Sbjct: 429 QYLISMSVELQKAN 442
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD +S A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVSLA 428
Query: 185 IYQICL 190
Y I +
Sbjct: 429 QYLISM 434
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 191 bits (486), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 204/406 (50%), Gaps = 89/406 (21%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIV 64
GDG + +T+R L H E+ +IG G V+R+R+ES A+++I++G+CP+RI+
Sbjct: 8 GDGGLG--VTLTLRLLMHG----KEVGSIIGKKGETVKRIREESSARVNISEGSCPERII 61
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCSPQ 122
T++GS D+ V A+ + LE+ + N + P
Sbjct: 62 TITGSTDS----------------------VFRAFTMITYKLEEDLTALVANGTISSKP- 98
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LVIPA+ CGSLIGKGG KIK+IR+ +GA +QVA D+LP STER VT+ GN D++
Sbjct: 99 PVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQVAGDLLPNSTERGVTISGNQDSVI 158
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVI-------------------LSGG- 222
Q + IC V++E KGA IPY P A +I GG
Sbjct: 159 QCVKLICTVILESP---PKGATIPYRPSPSPAALLIAGNQVFEASEFAPHPLYSVAQGGL 215
Query: 223 ---QAYTLHGEYAVPVQEVAGKKQ------PHPLAGLAVLGIEGIGSTSLTPAALAALSG 273
QAYTL +Y +P E+A Q P+A A I G+ S S T
Sbjct: 216 DLQQAYTLQNQYGIPHSELAKLHQLSVQQGLSPIAQPASAVIPGMDSNSQT--------- 266
Query: 274 SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKK 332
E+++ +D+ G +IG+ G+++ EIRQ+SGAQI I + + + +
Sbjct: 267 ---------------SQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDGTSDR 311
Query: 333 MFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
I G +++LAQYLI C+E K +T + P DL+ A +
Sbjct: 312 HVTITGTPVSINLAQYLITSCLETAK-STAQAASMGSPVDLNMAFT 356
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/227 (46%), Positives = 144/227 (63%), Gaps = 25/227 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D + +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+GS
Sbjct: 10 DSNVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGS 65
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
T+++ + TL +C + C +D IN P P+ L+L+
Sbjct: 66 -----TNAI---FKAFTL-------ICKKFEEWCSQFQD--INSGGSGVPRP-PITLRLI 107
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G + I+Q IY IC
Sbjct: 108 VPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTGEAITQCIYHIC 167
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP
Sbjct: 168 TVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH 211
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
Query: 263 LTPAALAALSGSRVK-SGGKDTGDDFVET-EIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
L PAALAAL+GS+++ S ++ + +T E+ + +++ GC+IGK G+++ EIRQISGA
Sbjct: 292 LNPAALAALAGSQLRTSNSRNQQNSNQQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAM 351
Query: 321 INIHTGTESHK----KMFHIQGCQEAVSLAQYLINMCIELQ 357
I I + + I G +AV+LAQYLINM I ++
Sbjct: 352 IRISNCDDRESGVTDRTITISGNPDAVALAQYLINMRISME 392
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ D T+R +T+ GNPD ++ A
Sbjct: 322 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISGNPDAVALA 381
Query: 185 IYQICL 190
Y I +
Sbjct: 382 QYLINM 387
>gi|9931476|gb|AAG02185.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585575|gb|EAW65171.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585578|gb|EAW65174.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585579|gb|EAW65175.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
Length = 369
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 131/353 (37%), Positives = 186/353 (52%), Gaps = 61/353 (17%)
Query: 39 CIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTA 98
C L +S A+I+I++G+CP+RI T++GS TA
Sbjct: 4 CPALILYLQSSARITISEGSCPERITTITGS---------------------------TA 36
Query: 99 YNFMCRSLEDYHINRNRME------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
F S+ + ++ + N S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 37 AVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRET 96
Query: 153 SGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTM 212
+GA VQVA D+LP STER VTV G PD I + QIC V++E KGA IPY P ++
Sbjct: 97 TGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SL 152
Query: 213 NAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAAL 271
+ G V+LS Q +++ G+Y AV EV +Q L+ AV + S+ P
Sbjct: 153 SLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---LSSHAV----PFATPSVVP------ 199
Query: 272 SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
G D G E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E +
Sbjct: 200 --------GLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAG 251
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
++ I G +++LAQYLI C+E K+ + T + PADL A S +TA
Sbjct: 252 ERHVTITGSPVSIALAQYLITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 303
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 144/240 (60%), Gaps = 26/240 (10%)
Query: 1 MDGNGDGKI---DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
MDG + + D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG
Sbjct: 1 MDGMDNKPVLNDDPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY-HINRNRM 116
+CP+RIVTV+G T+S+ + TL +C + C D
Sbjct: 57 SCPERIVTVTGP-----TNSIFKAF---TL-------ICKKFEEWCSQFHDVPGSGAGGG 101
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G
Sbjct: 102 GGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISG 161
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
+ I+Q IY IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP
Sbjct: 162 TSEAITQCIYHICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH 218
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLA 346
E+ + +++ GC+IGK G+++ EIRQISGA I I E + I G +AV+LA
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 347 QYLINMCIELQKNN 360
QYLINM +ELQK N
Sbjct: 434 QYLINMSVELQKAN 447
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD ++ A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 185 IYQICL 190
Y I +
Sbjct: 434 QYLINM 439
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 141/230 (61%), Gaps = 32/230 (13%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 13 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGP 68
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMEN---CSPQPLQL 126
++ + A+ +C+ E++ + +++ P+ L
Sbjct: 69 TNS----------------------IFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITL 106
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G + I+Q IY
Sbjct: 107 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIY 166
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
IC V++E KGA IPY PK GP+IL+GGQAYT+ G YAVP
Sbjct: 167 HICCVMLESP---PKGATIPYRPKPQVGGPLILAGGQAYTIQGNYAVPAH 213
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLA 346
E+ + +++ GC+IGK G+++ EIRQISGA I I E + I G +AV+LA
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 347 QYLINMCIELQKNN 360
QYLI+M +ELQK N
Sbjct: 429 QYLISMSVELQKAN 442
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD ++ A
Sbjct: 369 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 428
Query: 185 IYQICL 190
Y I +
Sbjct: 429 QYLISM 434
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/240 (44%), Positives = 144/240 (60%), Gaps = 26/240 (10%)
Query: 1 MDGNGDGKI---DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
MDG + + D +T+R + E+ +IG G IV+R R+ESGAKI+I+DG
Sbjct: 1 MDGMDNKPVLNDDPSVTLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RIVTV+G T+S+ + TL +C + C D
Sbjct: 57 SCPERIVTVTGP-----TNSI---FKAFTL-------ICKKFEEWCSQFHDIQGGGAGGG 101
Query: 118 N-CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G
Sbjct: 102 GGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISG 161
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
+ I+Q IY IC V++E KGA IPY PK GPVIL+GGQAYT+ G YAVP
Sbjct: 162 TSEAITQCIYHICCVMLESP---PKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPAH 218
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Query: 263 LTPAALAALSGSRVKSGGKDTGDDFVET---EIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
L PAALAAL+GS++++ + E+ + +++ GC+IGK G+++ EIRQISGA
Sbjct: 343 LNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGA 402
Query: 320 QINIHTGTESH----KKMFHIQGCQEAVSLAQYLINM 352
I I E + I G +AV+LAQYLINM
Sbjct: 403 MIRISNCEEREGGATDRTITITGNPDAVALAQYLINM 439
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD ++ A
Sbjct: 374 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 433
Query: 185 IYQI 188
Y I
Sbjct: 434 QYLI 437
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/382 (34%), Positives = 198/382 (51%), Gaps = 75/382 (19%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D + E L +T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+R
Sbjct: 2 DAGVTESGLNVTLTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
I+T++G + + A+ + LE D + + S
Sbjct: 58 IITLTGPTNA----------------------IFKAFAMIIDKLEEDINSSMTNSTAASR 95
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PAT CGSLIGKGGCKIK+IR +GA VQVA DMLP STE+ +T+ G P ++
Sbjct: 96 PPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQVAGDMLPNSTEQAITIAGMPQSV 155
Query: 182 SQAIYQICLVLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ---------------- 223
++ + QICLV++E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 156 TECVKQICLVMLETISQSPQGRVMTIPYQPMPASS-PVICAGGQDRYSNTAGYPHATHDL 214
Query: 224 ------AYTLHGEYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS 272
AY++ G++ + +A ++Q H G GI S S
Sbjct: 215 EGPPLDAYSIQGQHTISPLHLANLNQVARQQSHFAMMHGGTGFAGIDSNS---------- 264
Query: 273 GSRVKSGGKDTGDDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
VK G + D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S
Sbjct: 265 -PEVK-GYWASLDASTQTTHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGS 322
Query: 330 HKKMFHIQGCQEAVSLAQYLIN 351
+ I G ++SLAQYLIN
Sbjct: 323 SGRQVTITGSAASISLAQYLIN 344
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 199/377 (52%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ G +IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGYIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 188 bits (477), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 146/231 (63%), Gaps = 33/231 (14%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D + +T+R + E+ +IG G IV+R R+ESGAKI+I+DG+CP+RIVTV+G
Sbjct: 10 DPNITLTIRLIMQG----KEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTG- 64
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRN---RMENCSPQPLQL 126
P + ++ A++ +C+ E++ ++ M P P+ L
Sbjct: 65 -------------PTNAIF--------KAFSLICKKFEEFQELQSGGGSMGIPKP-PITL 102
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++PA+ CGSLIGKGG KIK+IR+++GA++QVAS+MLP STER VT+ G + I+Q IY
Sbjct: 103 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQCIY 162
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQE 237
IC V++E KGA IPY PK AGPVIL+GGQAYT+ G YAVP +
Sbjct: 163 HICCVMLESP---PKGATIPYRPKPQVAGPVILAGGQAYTIQGNYAVPAHD 210
>gi|344276217|ref|XP_003409905.1| PREDICTED: poly(rC)-binding protein 4-like [Loxodonta africana]
Length = 362
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 129/347 (37%), Positives = 184/347 (53%), Gaps = 61/347 (17%)
Query: 45 RKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCR 104
R S A+I+I++G+CP+RI T++GS TA F
Sbjct: 3 RGRSSARITISEGSCPERITTITGS---------------------------TAAVFHAV 35
Query: 105 SLEDYHINRNRME------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ 158
S+ + ++ + N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQ
Sbjct: 36 SMIAFKLDEDLCAAPANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQ 95
Query: 159 VASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVI 218
VA D+LP STER VTV G PD I + QIC V++E KGA IPY P +++ G V+
Sbjct: 96 VAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVL 151
Query: 219 LSGGQAYTLHGEY-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVK 277
LS Q +++ G+Y AV EV +Q L+G V +P+ +A L
Sbjct: 152 LSANQGFSVQGQYGAVTPAEVTKLQQ---LSGHTV--------PFASPSVVAGL------ 194
Query: 278 SGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHI 336
D E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I
Sbjct: 195 ----DPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTI 250
Query: 337 QGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
G +++LAQYLI C+E K+ + T + PADL A S +TA
Sbjct: 251 TGSPVSIALAQYLITACLETAKSTSGGTPGS-APADLPAPFSPPLTA 296
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 128/364 (35%), Positives = 194/364 (53%), Gaps = 68/364 (18%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA--------------- 48
Query: 88 WVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ A+ + LE D + + S P+ L+LV+PAT CGSLIGKGGCKI
Sbjct: 49 -------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI 101
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV-- 204
K+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++E Q +G V
Sbjct: 102 KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT 161
Query: 205 IPYEPKTMNAGPVILSGGQ----------------------AYTLHGEYAVPVQEVA--- 239
IPY+P ++ PVI +GGQ AY++ G++ + ++A
Sbjct: 162 IPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLN 220
Query: 240 --GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET--EIVLT 295
++Q H G GI S+S VK G + D +T E+ +
Sbjct: 221 QVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASLDASTQTTHELTIP 268
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G ++SLAQYLIN +
Sbjct: 269 NNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARL 328
Query: 355 ELQK 358
+K
Sbjct: 329 SSEK 332
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 187 bits (476), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 200/395 (50%), Gaps = 81/395 (20%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D ++ E L +T+R L H E+ +IG G +R RKESGA+I+I++G CP+R
Sbjct: 2 DARVTESELNATLTIRLLMHR----KEVGSIIGKKGESPKRFRKESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
I+T++G + + A+ + LE D + + S
Sbjct: 58 IITLTGPTNA----------------------IFKAFVMIIDKLEEDINSSMTNSTAASR 95
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PA CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++
Sbjct: 96 PPVTLRLVVPAYQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSV 155
Query: 182 SQAIYQICLVLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ---------------- 223
++ + QICLV++E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 156 TECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRWGYAAGYPHAAGYP 214
Query: 224 ------------AYTLHGEYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPA 266
AY++ G++ V ++A ++Q H G GI S S
Sbjct: 215 HDTHYLEGPPLDAYSIQGQHTVSPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSNS---- 270
Query: 267 ALAALSGSRVKSGGKDTGDDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
VK G + D +T E + +++ GC+IG+ G+ + EIRQ+SGAQI I
Sbjct: 271 -------PEVK-GYWASLDASTQTTHEFTIPNNLIGCIIGRQGANINEIRQMSGAQIKIA 322
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E S + I G ++SLAQYLIN + +K
Sbjct: 323 NPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 357
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 172/313 (54%), Gaps = 47/313 (15%)
Query: 44 LRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMC 103
+R+ESGA+I+I++G CP+RI+T++G + + A+ +
Sbjct: 1 MREESGARINISEGNCPERIITLAG----------------------PTNAIFKAFAMII 38
Query: 104 RSL-EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD 162
L ED + S P+ L+LV+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA D
Sbjct: 39 DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGD 98
Query: 163 MLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV-VKGAVIPYEPKTMNAGPVILSG 221
MLP STER +T+ G P +I + + QIC+V++E Q KG IPY PK ++ PVI +G
Sbjct: 99 MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRPKP-SSSPVIFAG 157
Query: 222 GQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GG 280
GQ LH ++A ++ P+ G GI S+S VK G
Sbjct: 158 GQLTKLH--------QLAMQQSHFPMTH-GNTGFSGIESSS-----------PEVKGYWG 197
Query: 281 KDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGC 339
D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 198 LDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGS 257
Query: 340 QEAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 258 AASISLAQYLINV 270
>gi|281341834|gb|EFB17418.1| hypothetical protein PANDA_012445 [Ailuropoda melanoleuca]
Length = 320
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/351 (35%), Positives = 182/351 (51%), Gaps = 76/351 (21%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
V+++R+ESGA+I+I++G CP+RI+T++G + + A+
Sbjct: 6 VKKMREESGARINISEGNCPERIITLAG----------------------PTNAIFKAFA 43
Query: 101 FMCRSL-EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV 159
+ L ED + S P+ L+LV+PA+ CGSLIGKGGCKIK+IR++ GA VQV
Sbjct: 44 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIREV-GAQVQV 102
Query: 160 ASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVIL 219
A DMLP STER +T+ G P +I + + QIC+V++E KG IPY PK ++ PVI
Sbjct: 103 AGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESP---PKGVTIPYRPKP-SSSPVIF 158
Query: 220 SGGQ-------------------------------AYTLHGEYAVP------VQEVAGKK 242
+GGQ AYT+ G+YA+P + ++A ++
Sbjct: 159 AGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQ 218
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
P+ G GI S+S A G D E+ + +D+ GC+
Sbjct: 219 SHFPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIPNDLIGCI 268
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
IG+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 269 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 319
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 194/362 (53%), Gaps = 76/362 (20%)
Query: 34 IGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVD 93
+G G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 111 LGRKGTSVKRIREESGARINISEGNCPERIITLTGPTNA--------------------- 149
Query: 94 NVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
+ A+ + LE D + + S P+ L+LV+PAT CGSLIGKGGCKIK+IR+
Sbjct: 150 -IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRES 208
Query: 153 SGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV--IPYEPK 210
+GA VQVA DMLP STER +T+ G P ++++ + QICLV++E Q +G V IPY+P
Sbjct: 209 TGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPM 268
Query: 211 TMNAGPVILSGGQ----------------------AYTLHGEYAVPVQEVA-----GKKQ 243
++ PVI +GGQ AY++ G++ + ++A ++Q
Sbjct: 269 PASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQ 327
Query: 244 PHPLAGLAVL----GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET--EIVLTDD 297
H A+L G GI S+S VK G + D +T E+ + ++
Sbjct: 328 SH----FAMLHGGTGFAGIDSSS-----------PEVK-GYWASLDASTQTTHELTIPNN 371
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIEL 356
+ GC+IG+ G+ + EIRQ+SGAQI I E S + I G ++SLAQYLIN +
Sbjct: 372 LIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSS 431
Query: 357 QK 358
+K
Sbjct: 432 EK 433
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/377 (33%), Positives = 191/377 (50%), Gaps = 79/377 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL-QLKLVIPAT 133
+ A+ + LE+ + + +PL L+LV+PA+
Sbjct: 68 --------------------IFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + IC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKHICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 224 EAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 276
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG G+++ EI Q+SGA I I E S +
Sbjct: 277 ---GLDASAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVT 333
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 334 ITGSAASISLAQYLINV 350
>gi|17384400|emb|CAD13196.1| hnRNP-E2 protein copy b [Xenopus laevis]
Length = 251
Score = 184 bits (467), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 111/257 (43%), Positives = 155/257 (60%), Gaps = 22/257 (8%)
Query: 98 AYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN 156
A++ + LE D + S P+ L+LV+PA+ CGSLIGKGGCKIK+IR+ +GA
Sbjct: 3 AFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQ 62
Query: 157 VQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP 216
VQVA DMLP STER +T+ G P +I + + QIC+V++E KG IPY PK ++ P
Sbjct: 63 VQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESP---PKGVTIPYRPKP-SSSP 118
Query: 217 VILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
VI +GGQAYT+ G+YA+P QP L L L ++ S P + SG+
Sbjct: 119 VIFAGGQAYTIQGQYAIP--------QPD-LTKLHQLAMQ----QSHFP---MSHSGNTG 162
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
SGG D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S+ +
Sbjct: 163 FSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVT 222
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 223 ITGSTASISLAQYLINV 239
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 184 bits (466), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 193/375 (51%), Gaps = 77/375 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV----------VKGAVIPYE-----------PKTMNA--------GPVILSGGQA 224
E + Q +K ++ P + P T + GP + +A
Sbjct: 168 EVSPQAPPKLQCIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL----EA 223
Query: 225 YTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS 278
YT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 224 YTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA-------- 274
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQ 337
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I
Sbjct: 275 -GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Query: 338 GCQEAVSLAQYLINM 352
G ++SLAQYLIN+
Sbjct: 334 GSAASISLAQYLINV 348
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/228 (42%), Positives = 137/228 (60%), Gaps = 29/228 (12%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQE 237
LV++E +GA IPY PK GPVIL+ GQA+T+ G YAVP QE
Sbjct: 173 LVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTIQGNYAVPTQE 217
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 47/73 (64%), Gaps = 4/73 (5%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVS 344
+ E+ +++D+ GC+IGK G+++ EIRQISGA I I E + I G ++V+
Sbjct: 338 QHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVA 397
Query: 345 LAQYLINMCIELQ 357
LAQYLINM I ++
Sbjct: 398 LAQYLINMRISME 410
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
Q Q ++ + G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD
Sbjct: 335 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 394
Query: 180 TISQAIYQI 188
+++ A Y I
Sbjct: 395 SVALAQYLI 403
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 182 bits (461), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 135/388 (34%), Positives = 195/388 (50%), Gaps = 81/388 (20%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS T++V + ++ +D ED
Sbjct: 57 SCPERITTITGS-----TAAV---FHAVSMIAFKLD-------------EDLCAAPANGS 95
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G
Sbjct: 96 NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGV 155
Query: 178 PDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQ 236
PD I + QIC V++E +++ G+Y AV
Sbjct: 156 PDAIILCVRQICAVILE-----------------------------GFSVQGQYGAVTPA 186
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTD 296
EV +Q L+G AV S S+ P G D E ++ +
Sbjct: 187 EVTKLQQ---LSGHAV----PFASPSVVP--------------GLDPSTQTSSQEFLVPN 225
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E
Sbjct: 226 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 285
Query: 356 LQKNNTTNTSDNPEPADLDAAISAFMTA 383
K+ + T + PADL A S +TA
Sbjct: 286 TAKSTSGGTPGS-APADLPAPFSPPLTA 312
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 181 bits (460), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/340 (34%), Positives = 176/340 (51%), Gaps = 74/340 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
P + ++ A+ + LE D + S P+ L+LV+PA+
Sbjct: 64 --------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
E AYT+ G+YA+P ++ + H LA
Sbjct: 168 E-----------------------------AYTIQGQYAIPQPDLT---KLHQLA----- 190
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEI 313
+ + G+ S G D E+ + +D+ GC+IG+ G+++ EI
Sbjct: 191 ---------MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 241
Query: 314 RQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
RQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 242 RQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINV 281
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 181 bits (459), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 131/391 (33%), Positives = 197/391 (50%), Gaps = 76/391 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+RKESGA+I I +G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIRKESGARIKILEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL-QLKLVIPAT 133
+ A+ + LE+ IN + ++ + L L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIYKLEE-DINSSMTKSTAASRLVTLRLVVPAT 106
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 107 QCGSLIGKGGCKIKEIRKSTGAQVQVAGDMLPNSTERAITIAGVPQSVTKCVKQICLVML 166
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E +G V I Y+P + PV +GGQ AY++ G
Sbjct: 167 ETLSHSPQGKVKTILYQPMPSRS-PVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 225
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTS-LTPAALAALSGSRVKSGGKDT 283
++ + +A ++Q H G GI S+S A+L S
Sbjct: 226 QHTISPLNLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAS--------- 276
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEA 342
+ E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G +
Sbjct: 277 --TQITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAAS 334
Query: 343 VSLAQYLINMCIELQKN-----NTTNTSDNP 368
+SLAQYLI + +K N+ + DNP
Sbjct: 335 ISLAQYLIKARLSSEKGMGCSWNSVGSLDNP 365
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 181 bits (459), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 101/234 (43%), Positives = 139/234 (59%), Gaps = 36/234 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G D + A+ + E+ IN N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINSMSNSTATSK 95
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 96 P-PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDA 154
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 155 IIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIP 204
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 143/239 (59%), Gaps = 38/239 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 EAKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSTAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
I Q + QIC+V++E KGA IPY PK +A PVI +GGQAY++ G+YA+P +V
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPASA-PVIFAGGQAYSIQGQYAIPHPDV 208
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 143/240 (59%), Gaps = 38/240 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P +V+
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDVS 241
>gi|113931242|ref|NP_001039068.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89273953|emb|CAJ81328.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
Length = 362
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/281 (40%), Positives = 154/281 (54%), Gaps = 48/281 (17%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD I
Sbjct: 11 PVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAII 70
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------- 223
Q + QIC+V++E KGA IPY PK +GP+I +GGQ
Sbjct: 71 QCVKQICVVMLESP---PKGATIPYRPKPA-SGPIIFAGGQVRAETILASAGNHTVLAQP 126
Query: 224 ----AYTLHGEYAVPVQEVAGKKQPHP-LAGLAVLGIEGIGSTSLTPAALAALSGSRVKS 278
A+ + G+YA+ PHP L L L ++ T TP L +
Sbjct: 127 QPAPAFAIQGQYAI----------PHPDLTKLHQLAMQ---HTPFTP-----LGQTTPGF 168
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQ 337
G D E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I +E + ++ I
Sbjct: 169 PGLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGERQVTIT 228
Query: 338 GCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
G +SLAQYLIN +E+ K +T S P DL+ +S
Sbjct: 229 GSPANISLAQYLINASLEMAKLSTQTASVT-TPVDLNMNLS 268
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 178 bits (452), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/235 (42%), Positives = 141/235 (60%), Gaps = 38/235 (16%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 EAKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSTAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +G+ VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGSQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP 234
I Q + QIC+V++E KGA IPY PK +A PVI +GGQAY++ G+YA+P
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPASA-PVIFAGGQAYSIQGQYAIP 204
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 177 bits (450), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/370 (34%), Positives = 194/370 (52%), Gaps = 51/370 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D + E L +T+R L H E+ +IG V+R+R+ESGA+ SI++G CP+R
Sbjct: 2 DAAVTESGLNVTLTIRLLMHG----KEVGSIIGKNEESVKRIREESGARFSISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSP 121
I+T++G P ++ A+ M LE D + + S
Sbjct: 58 IITLTG--------------PTCAIF--------KAFAMMINKLEEDINSSMTNSTAASR 95
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PAT CGSLIGKGGCKIK+IR+ +GA VQV+ DMLP STE+ +TV P ++
Sbjct: 96 PPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVSGDMLPNSTEQAITVAVVPQSV 155
Query: 182 SQAIYQICLVLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ------AYTLHG--EY 231
++ + QICLV++E Q +G V IPY+P ++ PV +GGQ A H +
Sbjct: 156 TECVQQICLVMLETLPQCPQGRVMPIPYQPMPASS-PVTCAGGQDRGSDAAGYPHATRDL 214
Query: 232 AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSG-------SRVKSGGKDTG 284
VP + + H ++ L + + + A L +G S G + +
Sbjct: 215 GVPPLDACSTQGQHTISPLHLAKLNQVARQQSHIAMLHGGTGFAGIESSSPEVKGYRASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGVNINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLIN 351
++SLAQYLIN
Sbjct: 335 SISLAQYLIN 344
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 175 bits (443), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 138/230 (60%), Gaps = 37/230 (16%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G D
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDA---------------- 97
Query: 89 VTSVDNVCTAYNFMCRSLEDYHINRNRMENC---SPQPLQLKLVIPATHCGSLIGKGGCK 145
+ A+ + E+ IN M N S P+ L+LV+PA+ CGSLIGKGG K
Sbjct: 98 ------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 149
Query: 146 IKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
IK+IR+ +GA VQVA DMLP STER VT+ G PD I Q + QIC+V++E KGA I
Sbjct: 150 IKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESP---PKGATI 206
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQPHPLAG 249
PY PK + PVI +GGQAYT+ G+YA+P + ++A ++ P P G
Sbjct: 207 PYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG 255
>gi|390347463|ref|XP_792931.3| PREDICTED: poly(rC)-binding protein 3-like [Strongylocentrotus
purpuratus]
Length = 369
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 107/257 (41%), Positives = 148/257 (57%), Gaps = 21/257 (8%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+L++P + CGSLIGKGG KIKDIR+ + A++ VAS+MLP STER VT+ G P+ I+
Sbjct: 17 PVSLRLIVPTSQCGSLIGKGGSKIKDIRETTSASITVASEMLPSSTERAVTISGTPEAIT 76
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGG------------QAYTLHGE 230
+AIYQ+C V++E KGA IPY PK A P+I +GG QAY +HG
Sbjct: 77 KAIYQVCCVMLESP---PKGATIPYRPKPATA-PIIFAGGSVSMTEQHLHQQQAYAVHGN 132
Query: 231 YAVPVQEVAGKKQPHPLAGLAVLGIEGI-GSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
YA+ ++ K H LA I G T +PAAL + + G +
Sbjct: 133 YALAQPDLT--KLHHQLALHHQQTPYAIPGQTPFSPAALTQFAAQTAAPPPQVQGQATTQ 190
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
EI + + + GCVIG+ G+++ EIRQ+SGA I I E S + I G E+V++AQ
Sbjct: 191 -EITIPNHLIGCVIGRGGTKIQEIRQMSGANIKIANSQEGSTDRSVTITGSPESVAVAQC 249
Query: 349 LINMCIELQKNNTTNTS 365
LIN +EL K T + S
Sbjct: 250 LINTSLELAKGLTFDPS 266
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 133/211 (63%), Gaps = 23/211 (10%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
E+ +IG G +++ R++SGAKI+I+DG CP+RIVTV+GS +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTE---------------C 65
Query: 88 WVTSVDNVCTAYNFMCR---SLEDYHINRNR-MENCSPQPLQLKLVIPATHCGSLIGKGG 143
+ + +C + M S + +N + + +P P+ L+L++PA+ CGSLIGK G
Sbjct: 66 ILKAFSLICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAG 125
Query: 144 CKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
KI++IR+++GA+VQVAS+MLP STER VTV G D +++ IYQIC V++EC KGA
Sbjct: 126 SKIREIREITGASVQVASEMLPNSTERTVTVAGTADAVTKCIYQICCVMLECP---PKGA 182
Query: 204 VIPYEPKTMNAGPVILSGGQAYTLHGEYAVP 234
IPY PK PVI +GGQAYT+ G YA+P
Sbjct: 183 TIPYRPKPAMP-PVIFAGGQAYTVQGSYAIP 212
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E+ + +D+ GCVIGK G ++ EIRQ+SGA I I + E S ++ I G EA++LAQYL
Sbjct: 308 EMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQYL 367
Query: 350 INM-CIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSM 400
IN + L+K + ++ +P + ++F ASV+ E+ + HP S+
Sbjct: 368 INTRQVSLRKASRLQSNHRRDP----SVSASFGGASVS----ERQSRHPSSL 411
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G +IGKGG KI +IR LSGA ++++S S ER V++ G P+ I+ A Y
Sbjct: 308 EMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE-GSKERCVSISGTPEAINLAQY 366
Query: 187 QI 188
I
Sbjct: 367 LI 368
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L +++++ GS+IGK G IK R+ SGA + ++ P ERIVTV G+ + I +
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCP---ERIVTVTGSTECILK 68
Query: 184 AIYQICLVLIE 194
A IC E
Sbjct: 69 AFSLICAKFEE 79
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 175/352 (49%), Gaps = 67/352 (19%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG+
Sbjct: 19 DPSVTLTIRLIMQG----KEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGT 74
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + +A+ + + E++ N + ++L+
Sbjct: 75 TNA----------------------IFSAFTLITKKFEEWCSQFNDAGKIGKTQIPIRLI 112
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP STER VT+ G+ + I+Q IYQIC
Sbjct: 113 VPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSAEQITQCIYQIC 172
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LV++E + + + P A + A T G LA
Sbjct: 173 LVMLESCPR----STVAKNPLASLAALGLAGMNPAST------------GGINHTAALAA 216
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
LA GS++++ + E+ +++D+ GC+IGK G++
Sbjct: 217 LA---------------------GSQLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTK 255
Query: 310 LLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
+ EIRQISGA I I E + I G ++V+LAQYLINM I ++
Sbjct: 256 IAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINMRISME 307
>gi|307175339|gb|EFN65358.1| Poly(rC)-binding protein 3 [Camponotus floridanus]
Length = 547
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/201 (43%), Positives = 125/201 (62%), Gaps = 33/201 (16%)
Query: 44 LRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMC 103
++ +SGAKI+I+DG+CP+RIVTV+G ++ + A+ +C
Sbjct: 24 MQGKSGAKINISDGSCPERIVTVTGPTNS----------------------IFKAFTLIC 61
Query: 104 RSLEDYHINRNRMEN--------CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGA 155
+ E++ + M+ S P+ L+L++PA+ CGSLIGKGG KIK+IR+++GA
Sbjct: 62 KKFEEWCSQFHDMQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 121
Query: 156 NVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAG 215
++QVAS+MLP STER VT+ G + I+Q IY IC V++E KGA IPY PK G
Sbjct: 122 SIQVASEMLPNSTERAVTISGTSEAITQCIYHICCVMLESP---PKGATIPYRPKPQVGG 178
Query: 216 PVILSGGQAYTLHGEYAVPVQ 236
PVIL+GGQAYT+ G YAVP
Sbjct: 179 PVILAGGQAYTIQGNYAVPAH 199
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLA 346
E+ + +++ GC+IGK G+++ EIRQISGA I I E + I G +AV+LA
Sbjct: 355 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 414
Query: 347 QYLINMCIELQKNN 360
QYLINM +ELQK N
Sbjct: 415 QYLINMSVELQKAN 428
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD ++ A
Sbjct: 355 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGATDRTITITGNPDAVALA 414
Query: 185 IYQICL 190
Y I +
Sbjct: 415 QYLINM 420
>gi|328712758|ref|XP_003244898.1| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 221/438 (50%), Gaps = 78/438 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
T+R L +S E+ +IG G V+ +R +SGA++ I++G+ P+RIV +SG
Sbjct: 28 FTIRILLNS----REVGNVIGIRGETVKNIRSQSGARVLISNGSTPERIVIISG------ 77
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
+T+ + C A + +E++ N PL LKL++PA+
Sbjct: 78 ----------NTIAI------CRATELIGLKVEEFSERLNGNWIGPKTPLTLKLIVPASQ 121
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
CG +IGK G KI++IRD S A + V S+MLP STER+V++ G TIS +Y +C VL++
Sbjct: 122 CGFIIGKNGSKIREIRDSSRAAILVGSNMLPNSTERLVSITGTTGTISHCVYLVCNVLLD 181
Query: 195 CTLQVVKGAVIPYEP-KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
+ I Y P K ++ E ++++ G + PL LA L
Sbjct: 182 SPPPNCES--IAYHPCKEISV--------------FETCTVIKDL-GTEHNIPLTNLAAL 224
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGG------------KDTGDDFVETEIVLTDDIAGC 301
G + + PAAL AL+GS++++ K++ D T I + DD+ GC
Sbjct: 225 GSGTATNGGINPAALTALAGSQLRASNRLNNNVSGQQYDKNSNSDIDTTTISVPDDLIGC 284
Query: 302 VIGKAGSRLLEIRQISGAQINIH--TGT----ESHKKMFHIQGCQEAVSLAQYLINMCIE 355
+IG+ GS++ +IRQISGA ++I GT E + I G +E+VS+A+YLI M +E
Sbjct: 285 IIGRRGSKIAKIRQISGATVHIFRSQGTIENREKVDRRITITGNKESVSVAKYLIEMSVE 344
Query: 356 LQKNN--TTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVTLGGLSELLANI 413
LQK N N S P+ + +I+ T +V + L K P + +S L A I
Sbjct: 345 LQKANLGEVNLSTLPD----NGSITTSSTPTV-AQLFAKLDP-------VNIISSLYAYI 392
Query: 414 AASNVKST--VQTTGAYR 429
A + + +QTTG +R
Sbjct: 393 AIFGAEKSPPIQTTGVHR 410
>gi|195552915|ref|XP_002076565.1| GD17651 [Drosophila simulans]
gi|194202176|gb|EDX15752.1| GD17651 [Drosophila simulans]
Length = 213
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 120/191 (62%), Gaps = 25/191 (13%)
Query: 48 SGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE 107
SGAKI+I+DG+CP+RIVTVSG+ + + +A+ + + E
Sbjct: 1 SGAKINISDGSCPERIVTVSGTTNA----------------------IFSAFTLITKKFE 38
Query: 108 DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMS 167
++ N + + ++L++PA+ CGSLIGK G KIK+IR +G ++QVAS+MLP S
Sbjct: 39 EWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNS 98
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTL 227
TER VT+ G+ + I+Q IYQICLV++E +GA IPY PK GPVIL+ GQA+T+
Sbjct: 99 TERAVTLSGSAEQITQCIYQICLVMLESP---PRGATIPYRPKPQVTGPVILANGQAFTI 155
Query: 228 HGEYAVPVQEV 238
G YAVP QEV
Sbjct: 156 QGNYAVPTQEV 166
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 142/262 (54%), Gaps = 61/262 (23%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 58 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 93
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 94 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 153
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---------------- 223
I Q + QIC+V++E KGA IPY PK + PVI +GGQ
Sbjct: 154 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQVRADPLAASTANLSLL 209
Query: 224 -------AYTLHGEYAVPVQEV 238
AYT+ G+YA+P +V
Sbjct: 210 LQHPPLPAYTIQGQYAIPHPDV 231
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/339 (33%), Positives = 171/339 (50%), Gaps = 33/339 (9%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T R L H E+ +I G V+++R+ESGA+ SI+DG CP+RI+T++G
Sbjct: 14 LTSRLLMHG----KEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-YHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + LE+ + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STE +T+ G P ++ + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTEWAITIAGIPQSLIECVKQICVVML 167
Query: 194 ECTLQV----VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
E Q KG I Y PK ++ VI +GGQ G + +P
Sbjct: 168 ETLSQPPHPHPKGLTITYRPKP-SSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLE 226
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
L + + +L + G+ S G D E+ +++D+ GC+IG+ G++
Sbjct: 227 GPPLELTKLHQLALQQSHFPMTHGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAK 286
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQ 347
+ EIRQ+SGAQI E S + I G ++SL Q
Sbjct: 287 INEIRQMSGAQIKTANPVEGSTDRQVTITGSAASISLPQ 325
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 117/340 (34%), Positives = 168/340 (49%), Gaps = 43/340 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H EI +IG G V+R+R++S A+I+I++G+CP+RI T++GS D
Sbjct: 23 LTLRMLMHG----KEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDA-- 76
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
V A + + LE+ + P+ L+LVIPA+
Sbjct: 77 --------------------VFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQ 116
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
CGSLIGK G KI++IR+ +GA VQVA D+LP STER VTV G PDTI + QIC V++E
Sbjct: 117 CGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIHCVRQICAVILE 176
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLG 254
+P E T G G + + P+P G
Sbjct: 177 ----------VPTESPTQAWGAFPHQHGYLPPKMTLSLISWSPCTHQSPPNPAVGKHWHP 226
Query: 255 IEGIGSTSLTPAA--LAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
I + P L +LS G DT E ++ +D+ GC+IG+ GS++ E
Sbjct: 227 IMTDAYSYWRPTTPLLTSLS----LPPGLDTSSQNSSQEFLVPNDLIGCIIGRHGSKISE 282
Query: 313 IRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
IRQ+SGA I I TE S ++ I G ++++AQYLI
Sbjct: 283 IRQMSGAHIKIGNQTEGSSERHVTITGSPVSITVAQYLIT 322
>gi|344250764|gb|EGW06868.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 306
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/326 (33%), Positives = 166/326 (50%), Gaps = 29/326 (8%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
E+ +I G V+++R+ESGA+ SI+DG CP+RI+T++G
Sbjct: 4 KEVGSIIAKKGESVKKMREESGARTSISDGNCPERIITLAG------------------- 44
Query: 88 WVTSVDNVCTAYNFMCRSLED-YHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ + A+ + LE+ + S P+ L+LV+PA+ CGSLIGKGGCKI
Sbjct: 45 ---PTNAIFKAFAMIIDKLEEGISSSMTNSTAASRPPVALRLVVPASQCGSLIGKGGCKI 101
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV----VKG 202
K+IR+ +GA VQVA DMLP STE +T+ G P ++ + + QIC+V++E Q KG
Sbjct: 102 KEIRESTGAQVQVAGDMLPNSTEWAITIAGIPQSLIECVKQICVVMLETLSQPPHPHPKG 161
Query: 203 AVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTS 262
I Y PK ++ VI +GGQ G + +P L + + +
Sbjct: 162 LTITYRPKP-SSSLVIFAGGQDRYSTGSDSASFPHTTQSMCLNPDLEGPPLELTKLHQLA 220
Query: 263 LTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
L + G+ S G D E+ +++D+ GC+IG+ G+++ EIRQ+SGAQI
Sbjct: 221 LQQSHFPMTHGNTGFSAGLDASAQTTSHELTISNDLIGCIIGRQGAKINEIRQMSGAQIK 280
Query: 323 IHTGTE-SHKKMFHIQGCQEAVSLAQ 347
E S + I G ++SL Q
Sbjct: 281 TANPVEGSTDRQVTITGSAASISLPQ 306
>gi|47220208|emb|CAF98973.1| unnamed protein product [Tetraodon nigroviridis]
Length = 345
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 174/374 (46%), Gaps = 93/374 (24%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G
Sbjct: 16 LTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITG------ 65
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHIN--RNRMENCSPQPLQLKLVIPA 132
D + A+ + E+ IN N + P P+ L+LV+PA
Sbjct: 66 ----------------PTDTIFKAFAMIAYKFEEDIINSMSNSLATSKP-PVTLRLVVPA 108
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ CGSLIGKGG KIK++R+ E + + + IS I+ C+ +
Sbjct: 109 SQCGSLIGKGGSKIKEMRE----------------AELLCVIK---EGISSDIF-FCMCV 148
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQ--------------------------AYT 226
T KGA IPY PK + PVI SGGQ AYT
Sbjct: 149 KSVTASPPKGATIPYRPKPAST-PVIFSGGQVRAEPALQHRCYFHTVNANENRPVSSAYT 207
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSL---TPAALAALSGSR-----VKS 278
+ G YA+P P L L L ++ T L TPA A LS + V
Sbjct: 208 IQGPYAIP--------HPDQLTKLHQLAMQQTPFTPLGQTTPAFPAFLSQTSFLVAFVSD 259
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQ 337
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S ++ I
Sbjct: 260 PGLDATPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITIT 319
Query: 338 GCQEAVSLAQYLIN 351
G +SLAQYLIN
Sbjct: 320 GTPANISLAQYLIN 333
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 126/215 (58%), Gaps = 35/215 (16%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RIVT++G D
Sbjct: 13 NVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTD 68
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC---SPQPLQLKL 128
+ A+ + E+ IN M N S P+ L+L
Sbjct: 69 A----------------------IFKAFAMIAYKFEEDIINS--MSNSPATSKPPVTLRL 104
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
V+PA+ CGSLIGKGG KIK++R+ +GA VQVA DMLP STER VT+ G P+ I Q + QI
Sbjct: 105 VVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQI 164
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ 223
C+V++E KGA IPY PK + PVI SGGQ
Sbjct: 165 CVVMLESP---PKGATIPYRPKPAST-PVIFSGGQ 195
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 109/335 (32%), Positives = 173/335 (51%), Gaps = 48/335 (14%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E +IG GG ++ R++S A+I+I+DG+ P+RIVTV+G +D
Sbjct: 52 VEQKEAGRIIGKGGAKIKSFREQSTARINISDGSLPERIVTVNGPIDA------------ 99
Query: 85 HTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
VC A+ +C+ L ED+ I N + S ++ L+IP HC S+IGKGG
Sbjct: 100 ----------VCKAFKLICQKLDEDFRIINNSSK--SEPTIKFDLLIPVPHCRSIIGKGG 147
Query: 144 CKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
+K+IR+ +GA V +AS++LP S++R++T+ G+ IS+ I ++ +L E L G
Sbjct: 148 GTVKEIRESTGAQVSIASNVLPNSSDRVMTITGSSSAISKCIQRLSQLLSELPL----GQ 203
Query: 204 VIPYEPKTMNAGPVILSGGQAYTL----HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIG 259
+PY+PK N P GQ + L G + +P P P+ I I
Sbjct: 204 HVPYQPKPPNVPPTAFQNGQVHELTFAVPGPFPIPPHAQLPYGPPVPV-------ITQIA 256
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT--DDIAGCVIGKAGSRLLEIRQIS 317
S+ ++ + S + +GG F + +L D+ GC+IG+ G ++ EIRQIS
Sbjct: 257 PYSVDIPSIVTQNFSAMSNGG-----TFARSTQLLKIPHDLIGCIIGRGGVKINEIRQIS 311
Query: 318 GAQINIHTGT-ESHKKMFHIQGCQEAVSLAQYLIN 351
GA I I + ++ + I G E++S AQYLI+
Sbjct: 312 GANIKIASPNGDTTGRQVTISGTPESISAAQYLIS 346
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
K ++ G +IGKGG KIK R+ S A + ++ LP ERIVTV+G D + +A
Sbjct: 49 KGLVEQKEAGRIIGKGGAKIKSFREQSTARINISDGSLP---ERIVTVNGPIDAVCKAFK 105
Query: 187 QICLVLIE 194
IC L E
Sbjct: 106 LICQKLDE 113
>gi|9931474|gb|AAG02184.1|AF257770_1 RNA binding protein MCG10 [Homo sapiens]
gi|9931478|gb|AAG02186.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585569|gb|EAW65165.1| poly(rC) binding protein 4, isoform CRA_a [Homo sapiens]
gi|119585574|gb|EAW65170.1| poly(rC) binding protein 4, isoform CRA_a [Homo sapiens]
Length = 424
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 185/408 (45%), Gaps = 116/408 (28%)
Query: 39 CIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTA 98
C L +S A+I+I++G+CP+RI T++GS TA
Sbjct: 4 CPALILYLQSSARITISEGSCPERITTITGS---------------------------TA 36
Query: 99 YNFMCRSLEDYHINRNRME------NCSPQPLQLKLVIPATHCGSLIGKGGCKI---KDI 149
F S+ + ++ + N S P+ L+LVIPA+ CGSLIGK G KI +++
Sbjct: 37 AVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIREV 96
Query: 150 R----------------------------------------------------DLSGANV 157
R +GA V
Sbjct: 97 RGEIYHPQGIRGKGAVVRGVLGLWRPPHLESSEPGQPFSGLWEQPEVAPVLCLQTTGAQV 156
Query: 158 QVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPV 217
QVA D+LP STER VTV G PD I + QIC V++E KGA IPY P +++ G V
Sbjct: 157 QVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTV 212
Query: 218 ILSGGQAYTLHGEY-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
+LS Q +++ G+Y AV EV +Q L+ AV + S+ P
Sbjct: 213 LLSANQGFSVQGQYGAVTPAEVTKLQQ---LSSHAV----PFATPSVVP----------- 254
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D G E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++
Sbjct: 255 ---GLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVT 311
Query: 336 IQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I G +++LAQYLI C+E K+ + T + PADL A S +TA
Sbjct: 312 ITGSPVSIALAQYLITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 358
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 127/231 (54%), Gaps = 51/231 (22%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LV+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I
Sbjct: 15 PVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSII 74
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
+ + QIC+V++E KG IPY PK ++ PVI +GG AYT+ G+
Sbjct: 75 ECVKQICVVMLESP---PKGVTIPYRPKP-SSSPVIFAGG-AYTIQGQAI---------- 119
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
P P+ D E+ + +D+ GC+
Sbjct: 120 -PQPI----------------------------------DASAQTTSHELTIPNDLIGCI 144
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
IG+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+
Sbjct: 145 IGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSTASISLAQYLINV 195
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 28/190 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG--- 68
+T+R + +S + LIG GGC ++ +R+ +GA++ + P +R +T++G
Sbjct: 16 VTLRLVVPAS----QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQ 71
Query: 69 ----SVDNSSTSSVETGYPGHTLWV------TSVDNVCTAYNFMCRSLEDYHINRNRMEN 118
V +E+ G T+ + V AY +++ +
Sbjct: 72 SIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPI-------D 124
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
S Q +L IP G +IG+ G KI +IR +SGA +++A + + ST+R VT+ G+
Sbjct: 125 ASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGST 183
Query: 179 DTISQAIYQI 188
+IS A Y I
Sbjct: 184 ASISLAQYLI 193
>gi|90086375|dbj|BAE91740.1| unnamed protein product [Macaca fascicularis]
Length = 283
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 155/284 (54%), Gaps = 45/284 (15%)
Query: 107 EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM 166
ED + + S P+ L+LV+PAT CGSLIGKGGCKIK+IR+ +GA VQVA DMLP
Sbjct: 8 EDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPN 67
Query: 167 STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ- 223
STER +T+ G P ++++ + QICLV++E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 68 STERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASS-PVICAGGQD 126
Query: 224 ---------------------AYTLHGEYAVPVQEVA-----GKKQPHPLAGLAVLGIEG 257
AY++ G++ + ++A ++Q H G G
Sbjct: 127 RCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAG 186
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQ 315
I S+S VK G + D +T E+ + +++ GC+IG+ G+ + EIRQ
Sbjct: 187 IDSSS-----------PEVK-GYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQ 234
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+SGAQI I E S + I G ++SLAQYLIN + +K
Sbjct: 235 MSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEK 278
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/226 (41%), Positives = 132/226 (58%), Gaps = 34/226 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H EI +IG G V+R+R++S A+I+I++G+CP+RI T++GS D
Sbjct: 19 LTLRMLMHG----KEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDA-- 72
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
V A + + LE+ + P+ L+LVIPA+
Sbjct: 73 --------------------VFRAVSMIAFKLEE---DLGDGTAAGRTPVTLRLVIPASQ 109
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
CGSLIGK G KI++IR+ SGA VQVA D+LP STER VTV G PDTI Q + QIC V++E
Sbjct: 110 CGSLIGKAGTKIREIRESSGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICAVILE 169
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA-VPVQEVA 239
KGA IPY P ++ G ++LS Q +++ G+Y+ VP EV+
Sbjct: 170 SP---PKGATIPYHPG-LSLGTILLSANQGFSMQGQYSGVPPAEVS 211
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 168/323 (52%), Gaps = 71/323 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGK 305
D +T E+ + +++ GC+IG+
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGR 297
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 62/252 (24%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP 234
AYT+ G+YA+P
Sbjct: 224 EAYTIQGQYAIP 235
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 30/212 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 23 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 76
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 77 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 116
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 117 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 176
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ 223
E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 177 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQ 207
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 130/212 (61%), Gaps = 30/212 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
P + ++ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 64 --------PTNAIF--------KAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ 223
E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQ 198
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 127/218 (58%), Gaps = 33/218 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H EI +IG G V+R+R++S A+I+I++G+CP+RI T++GS D
Sbjct: 19 LTLRMLMHG----KEIGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTDA-- 72
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
V A + + LE+ + P+ L+LVIPA+
Sbjct: 73 --------------------VFRAVSMIAFKLEE---DLGDGTAAGRTPVTLRLVIPASQ 109
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
CGSLIGK G KI++IR+ SGA VQVA D+LP STER VTV G PDTI Q + QIC V++E
Sbjct: 110 CGSLIGKAGTKIREIRESSGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICAVILE 169
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA 232
KGA IPY P ++ G ++LS Q +++ G+Y+
Sbjct: 170 SP---PKGATIPYHPG-LSLGTILLSANQGFSMQGQYS 203
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 30/212 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ 223
E Q +G V IPY+P ++ PVI +GGQ
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQ 198
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 132/223 (59%), Gaps = 32/223 (14%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D + ED L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 DPGVIEDGLNVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSP 121
I+T++G P + ++ A+ + L ED + S
Sbjct: 58 IITLAG--------------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASR 95
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSI 155
Query: 182 SQAIYQICLVLIECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ 223
+ + QIC+V++E Q KG IPY PK ++ PVI +GGQ
Sbjct: 156 IECVKQICVVMLETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQ 197
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/252 (36%), Positives = 134/252 (53%), Gaps = 62/252 (24%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP 234
AYT+ G+YA+P
Sbjct: 224 EAYTIQGQYAIP 235
>gi|432857879|ref|XP_004068771.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 453
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 144/275 (52%), Gaps = 39/275 (14%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LVIPA+ CGSLIGKGG KIK+IR+ +GA VQVA D+LP STER VT+ G D I
Sbjct: 82 PVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQVAGDLLPNSTEREVTISGGQDAII 141
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT---------------- 226
Q + IC V++E KGA IPY P + G V+L G Q +
Sbjct: 142 QCVKLICTVILESP---PKGATIPYRP-SPTPGSVLLGGTQVFEASDFGSHPLFSMVQGG 197
Query: 227 --LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
L YA VQ G LA L L I+ ALS + V ++
Sbjct: 198 VDLQQTYA--VQSHYGLHHSE-LAKLHQLSIQQ-----------QALSAAHVLPASMESN 243
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES-HKKMFHIQGCQEAV 343
E ++ +D+ G +IG+ GS++ EIRQ+SGAQI I + +S + I G A+
Sbjct: 244 SQ-TSQEFIIPNDLIGSIIGRQGSKINEIRQVSGAQIKIGSQIDSTSDRHVTITGTPIAI 302
Query: 344 SLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
+LAQYLI C+E K +T +S P P DL + +
Sbjct: 303 NLAQYLITSCLETAK-STAQSSSMPSPVDLTMSFT 336
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/222 (40%), Positives = 131/222 (59%), Gaps = 34/222 (15%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
D + ED L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 2 DPGVIEDGLNVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPER 57
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSP 121
I+T++G P + ++ A+ + L ED + S
Sbjct: 58 IITLAG--------------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASR 95
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
P+ L+LV+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I
Sbjct: 96 PPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSI 155
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ 223
+ + QIC+V++E KG IPY PK ++ PVI +GGQ
Sbjct: 156 IECVKQICVVMLESP---PKGVTIPYRPKP-SSSPVIFAGGQ 193
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 136/243 (55%), Gaps = 39/243 (16%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+G + E L +T+R L H E+ +IG G V+++R+ESGA+I+I+DG+ P+R
Sbjct: 5 EGGVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISDGSSPER 60
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCS 120
IVT++G+ + + A+ + E+ + N
Sbjct: 61 IVTITGASEV----------------------IFKAFAMIAEKFEEDILASMINSTVTSR 98
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P P+ L+LV PA+ CGSLIGKGG KIK+IR+ +GA VQVA D+LP STER VT+ G P
Sbjct: 99 P-PVTLRLVFPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDLLPDSTERAVTISGTPHA 157
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPK-TMNAGPVILS---GGQAYTLHGEYAVPVQ 236
I+Q + IC V++E KGA IPY PK + G +L+ A+ + G++A+P Q
Sbjct: 158 ITQCVKHICTVMLESP---PKGATIPYRPKPSAGGGHTVLTQPHAATAFAIPGQFAIPPQ 214
Query: 237 EVA 239
+V+
Sbjct: 215 DVS 217
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 181/394 (45%), Gaps = 111/394 (28%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE-------------------- 129
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
+P KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 130 -----SPP---------------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQY 162
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 163 GAVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGTQTSSQ 201
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 202 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 261
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 262 ITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 294
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 181/394 (45%), Gaps = 111/394 (28%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE-------------------- 129
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
+P KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 130 -----SPP---------------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQY 162
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 163 GAVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGAQTSSQ 201
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 202 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 261
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 262 ITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 294
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 122/394 (30%), Positives = 181/394 (45%), Gaps = 111/394 (28%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE-------------------- 129
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
+P KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 130 -----SPP---------------------KGATIPYHP-SLSLGTVLLSTNQGFSVQGQY 162
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+G AV S S+ P G D G
Sbjct: 163 GAVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGTQTSSQ 201
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 202 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 261
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 262 ITACLETAKSTSGGTPSS-APTDLPAPFSPPLTA 294
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 146/262 (55%), Gaps = 39/262 (14%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R + H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDPGLEEEPELSITLTLRMIMHG----KEVGSIIGKKGETVKRIREQSCARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRM 116
+CP+RI T++GS TG V A + + L ED
Sbjct: 57 SCPERITTITGS----------TGA------------VFHAVSMIAFKLDEDLCTGPPNG 94
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
+ S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G
Sbjct: 95 GSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA-VPV 235
PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y V
Sbjct: 155 VPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGTVTP 210
Query: 236 QEVAGKKQ----PHPLAGLAVL 253
EV+ +Q P P A +V+
Sbjct: 211 AEVSKLQQLSGHPVPFASPSVV 232
>gi|402886179|ref|XP_003906515.1| PREDICTED: poly(rC)-binding protein 2 [Papio anubis]
Length = 340
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 113/377 (29%), Positives = 176/377 (46%), Gaps = 101/377 (26%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+++ A ++ + + +P T+SQ+
Sbjct: 108 QCGSLIGKGGCKIKEIREVTEAALK-----------PYLFLFFSPLTLSQS--------- 147
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
KG IPY PK ++ PVI +GGQ
Sbjct: 148 -----PPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 201
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 202 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 254
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 255 ---GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 311
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 312 ITGSAASISLAQYLINV 328
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 183/395 (46%), Gaps = 113/395 (28%)
Query: 1 MDGNGDGKIDEDT----LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD 56
M G+ DG ++E+ +T+R L H E+ +IG G V+R+R++S A+I+I++
Sbjct: 1 MSGS-DGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
G+CP+RI T++GS TA F S+ + ++ +
Sbjct: 56 GSCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLC 88
Query: 117 E------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 89 AAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------------- 129
Query: 171 IVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE 230
+P KGA IPY P +++ G V+LS Q +++ G+
Sbjct: 130 ------SPP---------------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQ 161
Query: 231 Y-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
Y AV EV +Q L+ AV + S+ P G D G
Sbjct: 162 YGAVTPAEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSS 200
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQY
Sbjct: 201 QEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQY 260
Query: 349 LINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
LI C+E K+ + T + PADL A S +TA
Sbjct: 261 LITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 294
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 183/395 (46%), Gaps = 113/395 (28%)
Query: 1 MDGNGDGKIDEDT----LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD 56
M G+ DG ++E+ +T+R L H E+ +IG G V+R+R++S A+I+I++
Sbjct: 1 MSGS-DGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
G+CP+RI T++GS TA F S+ + ++ +
Sbjct: 56 GSCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLC 88
Query: 117 E------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 89 AAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------------- 129
Query: 171 IVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE 230
+P KGA IPY P +++ G V+LS Q +++ G+
Sbjct: 130 ------SPP---------------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQ 161
Query: 231 Y-AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
Y AV EV +Q L+ AV + S+ P G D G
Sbjct: 162 YGAVTPTEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSS 200
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQY
Sbjct: 201 QEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQY 260
Query: 349 LINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
LI C+E K+ + T + PADL A S +TA
Sbjct: 261 LITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 294
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 147 bits (372), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 121/388 (31%), Positives = 179/388 (46%), Gaps = 99/388 (25%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS +V + + F ED
Sbjct: 57 SCPERITTITGST-------------------AAVFHAVSMIAFKLD--EDLCAAPTNGG 95
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +
Sbjct: 96 SVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE-------------------------S 130
Query: 178 PDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQ 236
P KGA IPY P +++ G V+LS Q +++ G+Y AV
Sbjct: 131 PP---------------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTSA 168
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTD 296
EV +Q L+G AV S S+ P G D G E ++ +
Sbjct: 169 EVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPGAQTSSQEFLVPN 207
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E
Sbjct: 208 DLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLE 267
Query: 356 LQKNNTTNTSDNPEPADLDAAISAFMTA 383
K+ + T + P DL A S +TA
Sbjct: 268 TAKSTSGGTPGS-TPTDLPAPFSPPLTA 294
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 33/198 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R L E+ +IG G ++++R+ESGAKI+I+DG+CP+RIVT++G
Sbjct: 72 VLTIRLLMQG----KEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITG----- 122
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPA 132
TL V + A+N +C E+ + + N P+P + +++++PA
Sbjct: 123 ------------TLGV-----IGKAFNMVCNKFEEDML---LLPNSVPKPPITMRVIVPA 162
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
T CGSLIGKGG KIKDIR+ +GA++QVAS+MLP STER VT+ G D I+ + Q+C +L
Sbjct: 163 TQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQIL 222
Query: 193 IECTLQVVKGAVIPYEPK 210
+E KG+ I Y PK
Sbjct: 223 LEAP---PKGSTITYRPK 237
>gi|348581995|ref|XP_003476762.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Cavia porcellus]
Length = 360
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 116/377 (30%), Positives = 174/377 (46%), Gaps = 108/377 (28%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +P
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRE-------------------------SPP--------- 132
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 133 ------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 176
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 177 SGHAV----PFASPSVVP--------------GLDPAAQTSSQEFLVPNDLIGCVIGRQG 218
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 219 SKISEIRQMSGAHIKIGNQAEGAGERHITITGSPVSIALAQYLITACLETAKSTSGGTPG 278
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL A S +TA
Sbjct: 279 S-APADLPAPFSPPLTA 294
>gi|126343878|ref|XP_001381277.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Monodelphis
domestica]
Length = 214
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 118/207 (57%), Gaps = 15/207 (7%)
Query: 153 SGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTM 212
+GA VQVA DMLP STER VT+ G PD I Q + QIC+V++E KGA IPY PK
Sbjct: 2 TGAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESP---PKGATIPYRPKPA 58
Query: 213 NAGPVILSGGQAYTLHGEYAVP-------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP 265
+ PVI +GGQAYT+ G+YA+P + ++A ++ P P G G +
Sbjct: 59 ST-PVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSS 117
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
L G +S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I
Sbjct: 118 EEAQNLMG---QSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 174
Query: 326 GTE-SHKKMFHIQGCQEAVSLAQYLIN 351
TE S ++ I G +SLAQYLIN
Sbjct: 175 ATEGSSERQITITGTPANISLAQYLIN 201
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 82 YPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
+PG L + S + A N M +S + SP +L IP G +IG+
Sbjct: 107 FPGEKLPLHSSEE---AQNLMGQS---------PGLDASPPASTHELTIPNDLIGCIIGR 154
Query: 142 GGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
G KI +IR +SGA +++A + S+ER +T+ G P IS A Y I
Sbjct: 155 QGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQYLI 200
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 33/198 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R L E+ +IG G ++++R+ESGAKI+I+DG+CP+RIVT++G
Sbjct: 71 VLTIRLLMQG----KEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITG----- 121
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPA 132
TL V + A+N +C E+ + + N P+P + +++++PA
Sbjct: 122 ------------TLGV-----IGKAFNMVCNKFEEDML---LLPNSVPKPPITMRVIVPA 161
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
T CGSLIGKGG KIKDIR+ +GA++QVAS+MLP STER VT+ G D I+ + Q+C +L
Sbjct: 162 TQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQIL 221
Query: 193 IECTLQVVKGAVIPYEPK 210
+E KG+ I Y PK
Sbjct: 222 LEAP---PKGSTITYRPK 236
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 33/198 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R L E+ +IG G ++++R+ESGAKI+I+DG+CP+RIVT++G
Sbjct: 75 VLTIRLLMQG----KEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITG----- 125
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPA 132
TL V + A+N +C E+ + + N P+P + +++++PA
Sbjct: 126 ------------TLGV-----IGKAFNMVCNKFEEDML---LLPNSVPKPPITMRVIVPA 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
T CGSLIGKGG KIKDIR+ +GA++QVAS+MLP STER VT+ G D I+ + Q+C +L
Sbjct: 166 TQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQIL 225
Query: 193 IECTLQVVKGAVIPYEPK 210
+E KG+ I Y PK
Sbjct: 226 LEAP---PKGSTITYRPK 240
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 128/232 (55%), Gaps = 44/232 (18%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 10 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 65
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 66 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 98
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 99 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 158
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ 223
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q
Sbjct: 159 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQ 206
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L++++ GS+IGK G +K IR+ S A + ++ P ERI T+ G+ +
Sbjct: 27 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 83
Query: 184 AIYQICLVLIE--CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
A+ I L E C G + P T+ +++ Q +L G+ ++E+
Sbjct: 84 AVSMIAFKLDEDLCAAP-ANGGNVSRPPVTLR---LVIPASQCGSLIGKAGTKIKEI 136
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 124/212 (58%), Gaps = 44/212 (20%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R L E+ +IG G ++++R+ESGAKI+I+DG+CP+RIVT++G
Sbjct: 73 VLTIRLLMQG----KEVGSIIGKKGDQIKKIREESGAKINISDGSCPERIVTITG----- 123
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPA 132
TL V + A+N +C E+ + + N P+P + +++++PA
Sbjct: 124 ------------TLGV-----IGKAFNMVCNKFEEDML---LLPNSVPKPPITMRVIVPA 163
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
T CGSLIGKGG KIKDIR+ +GA++QVAS+MLP STER VT+ G D I+ + Q+C +L
Sbjct: 164 TQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLCMTQVCQIL 223
Query: 193 IECTLQVV--------------KGAVIPYEPK 210
+E T + + KG+ I Y PK
Sbjct: 224 LEVTRKKLSTENKATFKFQAPPKGSTITYRPK 255
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 158/347 (45%), Gaps = 51/347 (14%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
+I +IG G +++ R+ES A I+I+DG+ P+RIV+V+G+ D
Sbjct: 36 KDIGSIIGKEGSTIKQFRQESNAHINISDGSTPERIVSVTGTKDA--------------- 80
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
V TA+ + + LED + N N +P P+ L+L++P + CGS+IGKGG KIK
Sbjct: 81 -------VVTAFALIGQKLED-ELKSNSKSNTTP-PVTLRLIVPGSQCGSIIGKGGAKIK 131
Query: 148 DIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPY 207
+IR++SGA+V VA + LP S+ER VT+ G P+ + I +C V+IE +G +PY
Sbjct: 132 EIREVSGASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFP---PRGHPMPY 188
Query: 208 EPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAA 267
P + Q + G Y + PH
Sbjct: 189 TPHKLQQQFGFYGPPQGFGYPGPYGM----------PHAFP------------NGFMAGR 226
Query: 268 LAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI-HTG 326
G + K + + G +IG+ GS + IRQ+SGA I I +
Sbjct: 227 GPYGGGRKGKGPPPPQPGPITSHTMTILKGAVGSIIGQKGSYITGIRQMSGASIKIGDSE 286
Query: 327 TESHKKMFHIQGCQEAVSLAQYLINMCIELQ-KNNTTNTSDNPEPAD 372
K+ I G EAV LAQ+LIN + K+ D P A+
Sbjct: 287 NGDDKREVLITGTAEAVGLAQFLINARLRQDGKSPVVTDKDKPHNAE 333
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGC 339
G+ + V I+ DI G +IGK GS + + RQ S A INI G+ + +++ + G
Sbjct: 20 GRGHSSNLVLKMIMQGKDI-GSIIGKEGSTIKQFRQESNAHINISDGS-TPERIVSVTGT 77
Query: 340 QEAVSLAQYLINMCI--ELQKNNTTNTS 365
++AV A LI + EL+ N+ +NT+
Sbjct: 78 KDAVVTAFALIGQKLEDELKSNSKSNTT 105
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L LK+++ GS+IGK G IK R S A++ ++ P ERIV+V G D +
Sbjct: 27 LVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGSTP---ERIVSVTGTKDAVVT 83
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
A I L + K P P T+ +I+ G Q ++ G+ ++E+
Sbjct: 84 AFALIGQKLEDELKSNSKSNTTP--PVTLR---LIVPGSQCGSIIGKGGAKIKEI 133
>gi|326935642|ref|XP_003213877.1| PREDICTED: poly(rC)-binding protein 2-like, partial [Meleagris
gallopavo]
Length = 168
Score = 142 bits (357), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/184 (42%), Positives = 114/184 (61%), Gaps = 27/184 (14%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
V+++R+ESGA+I+I++G CP+RI+T++G P + ++ A+
Sbjct: 11 VKKMREESGARINISEGNCPERIITLAG--------------PTNAIF--------KAFA 48
Query: 101 FMCRSL-EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV 159
+ L ED + S P+ L+LV+PA+ CGSLIGKGGCKIK+IR+ +GA VQV
Sbjct: 49 MIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 108
Query: 160 ASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVIL 219
A DMLP STER +T+ G P +I + + QIC+V++E KG IPY PK ++ PVI
Sbjct: 109 AGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESP---PKGVTIPYRPKP-SSSPVIF 164
Query: 220 SGGQ 223
+GGQ
Sbjct: 165 AGGQ 168
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 33/198 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R L E+ +IG G ++ +R SGAKI+I+DG+CP+RIVT++G+VD
Sbjct: 22 ILTIRLLMQG----KEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDT- 76
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPA 132
+ A++ +C ++ + + N P+P + ++L++PA
Sbjct: 77 ---------------------INKAFSMICNKFQE---DMQALPNSVPKPPITMRLIVPA 112
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
T CGSLIGKGG KIK+IR+ +GA++QVAS+MLP STER VT+ G+ D I + IC +L
Sbjct: 113 TQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADAIVLCMQHICHIL 172
Query: 193 IECTLQVVKGAVIPYEPK 210
+E KG +PY PK
Sbjct: 173 LEAP---PKGTTLPYRPK 187
>gi|334343559|ref|XP_003341817.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Monodelphis
domestica]
Length = 367
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 123/408 (30%), Positives = 183/408 (44%), Gaps = 103/408 (25%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R + H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDPGLEEEPELSITLTLRMIMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRM 116
+CP+RI T++GS V A + + L ED
Sbjct: 57 SCPERITTITGSTGA----------------------VFHAVSMIAFKLDEDLCTGPPNG 94
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
+ S P+ L+LVIPA+ CGSLIGK G KIK+IR+
Sbjct: 95 GSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRE------------------------- 129
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA-VPV 235
+P KGA IPY P +++ G V+LS Q +++ G+Y V
Sbjct: 130 SPP---------------------KGATIPYHP-SLSLGTVLLSANQGFSVQGQYGTVTP 167
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT 295
EV+ +Q L+G V S S+ P G D E ++
Sbjct: 168 AEVSKLQQ---LSGHPV----PFASPSVVP--------------GLDPSAQTSSQEFLVP 206
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+D+ GCVIG+ GS++ EIRQ+SGA I I E S ++ I G +++LAQYLI C+
Sbjct: 207 NDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGSGERHVTITGSPVSIALAQYLITACL 266
Query: 355 ELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVT 402
E K+ + T + ADL A S + S +L P PG + T
Sbjct: 267 ETAKSTSGGTPGSGT-ADLSAPFSPPLAPS--PALTALPAAPPGLLGT 311
>gi|47229298|emb|CAG04050.1| unnamed protein product [Tetraodon nigroviridis]
Length = 455
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 121/227 (53%), Gaps = 51/227 (22%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+ E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 49 LQEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTS-------------- 94
Query: 87 LWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ A++ + LE D + S P+ ++LV+PA+ CGSLIGKGGCK
Sbjct: 95 --------IFKAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCK 146
Query: 146 IKDIRDLS------------------------GANVQVASDMLPMSTERIVTVHGNPDTI 181
IK+IR++S GA VQVA DMLP STER +T+ G P +I
Sbjct: 147 IKEIREVSGVAPAGKGFRSLRCNPAAVSLQSAGAQVQVAGDMLPNSTERAITIAGTPQSI 206
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLH 228
+ + QIC+V++E KG IPY PK + PVI +GGQ H
Sbjct: 207 IECVKQICVVMLESP---PKGVTIPYRPKP-SGSPVIFAGGQVKCPH 249
>gi|198416446|ref|XP_002119674.1| PREDICTED: similar to rCG61051 [Ciona intestinalis]
Length = 465
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 172/381 (45%), Gaps = 72/381 (18%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISIT-DGACPDRIVTVSG 68
+ED +IT+R L I G + + R ESGA+I+I+ + + P+RIVT++G
Sbjct: 5 NEDMIITVRMLMIGKEIGGIIGK----AGTNIAKFRSESGARITISSEQSVPERIVTITG 60
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR-MENCSPQ--PLQ 125
G +V+ + H + N + NC+ P+
Sbjct: 61 ---------------GRGQIHKAVELIAG----------KMHSDINSGLSNCATNTVPVT 95
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++L++PA+ CGS+IGKGG KIK+IRD +G +QV S+MLP +ER VT+ G P TI I
Sbjct: 96 IRLIVPASQCGSIIGKGGVKIKEIRDTTGCAIQVQSEMLPNCSERTVTLSGAPSTILHCI 155
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
+C V+I+ K A +P++P N I G+ Y L G
Sbjct: 156 DMLCDVMIQYP---AKTATVPFKPDVGNP-TCIFHQGKTYMLQGXXXXXXXXXXXXXXXX 211
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK------DTGDDFVE---------- 289
LG G + P A SG+ + G D +D +
Sbjct: 212 XXYEF-TLGKSGTAA----PMIFARSSGNHQYTDGNCNHFTMDAAEDIEDLPCHSVNIEA 266
Query: 290 -----------TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH---TGTESHKKMFH 335
E+ + ++ GC+IGK GSR+ EIR +SGAQI I+ ES +
Sbjct: 267 NFPARLISCNTQELTVGNEFMGCIIGKGGSRIKEIRMLSGAQIQINKVEKEDESVDRKIT 326
Query: 336 IQGCQEAVSLAQYLINMCIEL 356
IQG EA+SLA YLI + + +
Sbjct: 327 IQGSAEAISLAYYLITLSVNM 347
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 117/198 (59%), Gaps = 33/198 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++T+R L E+ +IG G ++ +R SGAKI+I+DG+CP+RIVT++G+VD
Sbjct: 22 ILTIRLLMQG----KEVGSIIGKRGDHIKSIRDGSGAKINISDGSCPERIVTITGNVDT- 76
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPA 132
+ A++ +C ++ + + N P+P + ++L++PA
Sbjct: 77 ---------------------INKAFSMICNKFQE---DMQALPNSVPKPPITMRLIVPA 112
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
T CGSLIGKGG KIK+IR+ +GA++QVAS+MLP STER VT+ G+ D I + IC +L
Sbjct: 113 TQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADAIVLCMQHICHIL 172
Query: 193 IECTLQVVKGAVIPYEPK 210
+E KG +PY PK
Sbjct: 173 LEAP---PKGTTLPYRPK 187
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 108/186 (58%), Gaps = 26/186 (13%)
Query: 26 NVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGH 85
++ E+ +IG G V+++R+ESGA+I+I++G+ P+RIVT++G+ +
Sbjct: 4 HLQEVGSIIGKKGETVKKIREESGARINISEGSSPERIVTITGATEA------------- 50
Query: 86 TLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
+ + + + E D + + S P+ L+LV P + CGSLIGKGG
Sbjct: 51 ---------IFRTFAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGS 101
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
KIK+IR+ +GA VQVA DMLP STER VT+ G P I+Q + IC V++E KGA
Sbjct: 102 KIKEIRETTGAQVQVAGDMLPDSTERAVTISGTPQAITQCVRHICSVMLESP---PKGAT 158
Query: 205 IPYEPK 210
IPY PK
Sbjct: 159 IPYRPK 164
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 24/128 (18%)
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
G +IGK G + +IR+ SGA+INI G+ S +++ I G EA+ +I E
Sbjct: 9 GSIIGKKGETVKKIREESGARINISEGS-SPERIVTITGATEAIFRTFAMIAQKFE---- 63
Query: 360 NTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVTLGGLSELLANIAASNVK 419
D++AA+S NS++ KP P +V G L S +K
Sbjct: 64 -----------EDINAAMS-------NSNVTSKP-PVTLRLVFPGSQCGSLIGKGGSKIK 104
Query: 420 STVQTTGA 427
+TTGA
Sbjct: 105 EIRETTGA 112
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 134 bits (337), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 112/185 (60%), Gaps = 27/185 (14%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSV 70
++ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 1 KNVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG-- 54
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLV 129
P + ++ A+ + L ED + S P+ L+LV
Sbjct: 55 ------------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLV 94
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+PA+ CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC
Sbjct: 95 VPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQIC 154
Query: 190 LVLIE 194
+V++E
Sbjct: 155 VVMLE 159
>gi|360042755|emb|CCD78165.1| putative poly(rc) binding protien [Schistosoma mansoni]
Length = 862
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 28/195 (14%)
Query: 35 GPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDN 94
G G VR+ R+ESGA+I+I+DG+ P+RIVT++G+ +
Sbjct: 190 GKRGENVRKYREESGARINISDGSSPERIVTITGTTEQ---------------------- 227
Query: 95 VCTAYNFMCRSLED-YHINRNRM--ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
+ A+ M R ED + RM E + P+ L+L++P CGS+IGKGG KIKD+R+
Sbjct: 228 IYIAFTLMSRKFEDDFTQGLLRMGDETANCPPVTLRLLVPVAQCGSIIGKGGSKIKDVRE 287
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
L+GA++QVAS+ LP STER VT+ G D+IS+ I +C + +EC KG VI Y PK
Sbjct: 288 LTGASIQVASEALPTSTERTVTISGTADSISKCIRLLCDIFLECP---NKGPVILYRPKP 344
Query: 212 MNAGPVILSGGQAYT 226
+ P ++ ++
Sbjct: 345 VIGNPGLICPATTFS 359
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
P++ + G + L GL L I I L P +L +T + + E++
Sbjct: 625 PIKSIRGLQNTASLLGLPSLSINTI----LNPQQQNSLFSL------ANTEESIIVREMI 674
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYLINM 352
+++D+ GC+IG+ G+ + EIR S AQI I + K + + G ++V+LAQ+LIN
Sbjct: 675 ISNDVIGCIIGRGGTTINEIRNASKAQIKISNCEDGAKERKITVSGKLDSVNLAQFLINS 734
Query: 353 CIELQK 358
I + +
Sbjct: 735 SIAIHR 740
>gi|256073934|ref|XP_002573282.1| poly(rc) binding protien [Schistosoma mansoni]
Length = 862
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 112/195 (57%), Gaps = 28/195 (14%)
Query: 35 GPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDN 94
G G VR+ R+ESGA+I+I+DG+ P+RIVT++G+ +
Sbjct: 190 GKRGENVRKYREESGARINISDGSSPERIVTITGTTEQ---------------------- 227
Query: 95 VCTAYNFMCRSLED-YHINRNRM--ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
+ A+ M R ED + RM E + P+ L+L++P CGS+IGKGG KIKD+R+
Sbjct: 228 IYIAFTLMSRKFEDDFTQGLLRMGDETANCPPVTLRLLVPVAQCGSIIGKGGSKIKDVRE 287
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
L+GA++QVAS+ LP STER VT+ G D+IS+ I +C + +EC KG VI Y PK
Sbjct: 288 LTGASIQVASEALPTSTERTVTISGTADSISKCIRLLCDIFLECP---NKGPVILYRPKP 344
Query: 212 MNAGPVILSGGQAYT 226
+ P ++ ++
Sbjct: 345 VIGNPGLICPATTFS 359
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
P++ + G + L GL L I I L P +L +T + + E++
Sbjct: 625 PIKSIRGLQNTASLLGLPSLSINTI----LNPQQQNSLFSL------ANTEESIIVREMI 674
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYLINM 352
+++D+ GC+IG+ G+ + EIR S AQI I + K + + G ++V+LAQ+LIN
Sbjct: 675 ISNDVIGCIIGRGGTTINEIRNASKAQIKISNCEDGAKERKITVSGKLDSVNLAQFLINS 734
Query: 353 CIELQK 358
I + +
Sbjct: 735 SIAIHR 740
>gi|339242773|ref|XP_003377312.1| poly(rC)-binding protein 3 [Trichinella spiralis]
gi|316973900|gb|EFV57443.1| poly(rC)-binding protein 3 [Trichinella spiralis]
Length = 410
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 70/164 (42%), Positives = 105/164 (64%), Gaps = 29/164 (17%)
Query: 47 ESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL 106
+S AKI+I+DG CP+RIVT++GSV ++D TA+ +C+
Sbjct: 57 KSMAKINISDGTCPERIVTITGSVQ-------------------AID---TAFKMICKKF 94
Query: 107 EDYHINRNRMENCSPQP-LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP 165
E+ ++ ++ + P+P + +L++PAT CG LIG+GG KIKDIR+ +GA++QVAS+MLP
Sbjct: 95 EE---DQQQIPDSVPKPPITFRLIVPATQCGCLIGRGGSKIKDIREATGASIQVASEMLP 151
Query: 166 MSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
STER VT+ G + I Q + QICL+L+E KGA++PY P
Sbjct: 152 NSTERAVTLSGTAEAIIQCMNQICLILLESP---PKGAIVPYRP 192
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 115/192 (59%), Gaps = 31/192 (16%)
Query: 22 HSSVNV--NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVE 79
HSS+ E+ +IG G ++ +R +SGAKI+I+DG+CP+RIVT++GS
Sbjct: 3 HSSIWFVHKEVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGS---------- 52
Query: 80 TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPATHCGSL 138
TG + A+ +C L+ + + N P+P + ++L++PAT CG +
Sbjct: 53 TG------------TINKAFIMICAKLQQ---DLQALPNSIPKPPITMRLIVPATQCGCI 97
Query: 139 IGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
IGKGG KIK+IR+ +GA++QVAS+MLP STER VT+ G+ D+I + IC +L+E
Sbjct: 98 IGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSADSIVDCMRNICQILLEAP-- 155
Query: 199 VVKGAVIPYEPK 210
KG +PY PK
Sbjct: 156 -AKGNTLPYRPK 166
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 102/176 (57%), Gaps = 26/176 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H EI +IG G V+R+R++S A+I+I++G+CP+RI T++GS D
Sbjct: 23 LTLRMLMHG----KEIGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGSTDA-- 76
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
V A + + LE+ + P+ L+LVIPA+
Sbjct: 77 --------------------VFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQ 116
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
CGSLIGK G KI++IR+ +GA VQVA D+LP STER VTV G PDTI Q + QICL
Sbjct: 117 CGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICL 172
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L++++ GS+IGK G +K IR+ S A + ++ P ERI T+ G+ D + +
Sbjct: 23 LTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTITGSTDAVFR 79
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQE------ 237
A+ I L E G P T+ +++ Q +L G+ ++E
Sbjct: 80 AVSMIAFKLEEDLGAGGDGVSAGRAPVTLR---LVIPASQCGSLIGKAGAKIREIRESTG 136
Query: 238 ----VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
VAG P+ + + G+ T + L D E +
Sbjct: 137 AQVQVAGDLLPNSTE--RAVTVSGVPDTIIQCVRQICL----------DPSSQSSSQEFL 184
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ GS++ EIRQ+SGA I I TE S ++ I G +++LAQYLI
Sbjct: 185 VPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHVTITGTPVSITLAQYLIT 243
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 43/191 (22%)
Query: 1 MDGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP 60
+ GDG +T+R + +S + LIG G +R +R+ +GA++ + P
Sbjct: 92 LGAGGDGVSAGRAPVTLRLVIPAS----QCGSLIGKAGAKIREIRESTGAQVQVAGDLLP 147
Query: 61 ---DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+R VTVSG D + V +C
Sbjct: 148 NSTERAVTVSGVPDT---------------IIQCVRQICL-------------------- 172
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S Q + ++P G +IG+ G KI +IR +SGA++++ + S+ER VT+ G
Sbjct: 173 DPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHVTITGT 231
Query: 178 PDTISQAIYQI 188
P +I+ A Y I
Sbjct: 232 PVSITLAQYLI 242
>gi|224163407|ref|XP_002198626.1| PREDICTED: poly(rC)-binding protein 2-like [Taeniopygia guttata]
Length = 282
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 117/208 (56%), Gaps = 14/208 (6%)
Query: 146 IKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
I + + +GA VQVA DMLP STER +T+ G P +I + + QIC+V++E KG I
Sbjct: 76 IDKLEESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESP---PKGVTI 132
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP 265
PY PK ++ PVI +GGQAYT+ G+YA+P +V+ Q L VL I S +
Sbjct: 133 PYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDVSFYLQ------LLVLKIHPF-PPSPSK 184
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
L A S S + T +L + GC+IG+ G+++ EIRQ+SGAQI I
Sbjct: 185 NFLRAFSARLTPSLSSPFPPEL--TPSLLPSQLIGCIIGRQGAKINEIRQMSGAQIKIAN 242
Query: 326 GTE-SHKKMFHIQGCQEAVSLAQYLINM 352
E S + I G ++SLAQYLIN+
Sbjct: 243 PVEGSTDRQVTITGSAASISLAQYLINV 270
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 4/60 (6%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 11 NVTLTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTN 66
Score = 45.1 bits (105), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 120 SPQPLQL-KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
SP P +L ++P+ G +IG+ G KI +IR +SGA +++A+ + ST+R VT+ G+
Sbjct: 200 SPFPPELTPSLLPSQLIGCIIGRQGAKINEIRQMSGAQIKIANP-VEGSTDRQVTITGSA 258
Query: 179 DTISQAIYQICLVL 192
+IS A Y I + L
Sbjct: 259 ASISLAQYLINVRL 272
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 110/183 (60%), Gaps = 29/183 (15%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
E+ +IG G ++ +R +SGAKI+I+DG+CP+RIVT++GS+
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGT---------------- 44
Query: 89 VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPATHCGSLIGKGGCKIK 147
+ A+ +C L+ + + N P+P + ++L++PAT CG +IGKGG KIK
Sbjct: 45 ------INKAFGMICAKLQQ---DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIK 95
Query: 148 DIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPY 207
+IR+ +GA++QVAS+MLP STER VT+ G+ D+I + IC +L+E KG +PY
Sbjct: 96 EIREATGASIQVASEMLPSSTERAVTISGSADSIVDCMRNICQILLEAP---PKGNTLPY 152
Query: 208 EPK 210
PK
Sbjct: 153 RPK 155
>gi|119585581|gb|EAW65177.1| poly(rC) binding protein 4, isoform CRA_f [Homo sapiens]
Length = 244
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 114/204 (55%), Gaps = 42/204 (20%)
Query: 1 MDGNGDGKIDED----TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD 56
M G+ DG ++E+ +T+R L H E+ +IG G V+R+R++S A+I+I++
Sbjct: 1 MSGS-DGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISE 55
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
G+CP+RI T++GS TA F S+ + ++ +
Sbjct: 56 GSCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLC 88
Query: 117 E------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 89 AAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTER 148
Query: 171 IVTVHGNPDTISQAIYQICLVLIE 194
VTV G PD I + QIC V++E
Sbjct: 149 AVTVSGVPDAIILCVRQICAVILE 172
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L++++ GS+IGK G +K IR+ S A + ++ P ERI T+ G+ +
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 184 AIYQICLVLIE--CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
A+ I L E C G + P T+ +++ Q +L G+ ++E+
Sbjct: 75 AVSMIAFKLDEDLCAAP-ANGGNVSRPPVTLR---LVIPASQCGSLIGKAGTKIKEI 127
>gi|149018652|gb|EDL77293.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018654|gb|EDL77295.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018655|gb|EDL77296.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018656|gb|EDL77297.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018658|gb|EDL77299.1| rCG25644, isoform CRA_a [Rattus norvegicus]
gi|149018659|gb|EDL77300.1| rCG25644, isoform CRA_a [Rattus norvegicus]
Length = 183
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 37/186 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIE 194
C V++E
Sbjct: 167 CAVILE 172
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L++++ GS+IGK G +K IR+ S A + ++ P ERI T+ G+ +
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 184 AIYQICLVLIE--CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
A+ I L E C G + P T+ +++ Q +L G+ ++E+
Sbjct: 75 AVSMIAFKLDEDLCAAP-ANGGSVSRPPVTLR---LVIPASQCGSLIGKAGTKIKEI 127
>gi|395835433|ref|XP_003790684.1| PREDICTED: poly(rC)-binding protein 2-like [Otolemur garnettii]
Length = 414
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/311 (30%), Positives = 142/311 (45%), Gaps = 83/311 (26%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGA---------------------------- 155
L ++L++ GS+IGK G +K +R+ SGA
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFKAFS 73
Query: 156 ---NVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTM 212
VQVA DMLP STER +T+ G P +I + + QIC+V++E KG IPY PK
Sbjct: 74 TGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESP---PKGVTIPYRPKP- 129
Query: 213 NAGPVILSGGQ-------------------------------AYTLHGEYAVP------V 235
++ PVI +GGQ AYT+ G+YA+P +
Sbjct: 130 SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKL 189
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT 295
++A ++ P+ G GI S+S A G D E+ +
Sbjct: 190 HQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA---------GLDASAQTTSHELTIP 239
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G ++SLAQYLIN+ +
Sbjct: 240 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITGSAASISLAQYLINVSL 299
Query: 355 ELQKNNTTNTS 365
E K ++ S
Sbjct: 300 ENAKPSSQAAS 310
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%), Gaps = 4/57 (7%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTN 66
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/381 (30%), Positives = 176/381 (46%), Gaps = 76/381 (19%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ T +T+R + S E +IG GG V LR+E+G K ++
Sbjct: 34 DGEPAPKTDEEYAQTQLTLRAIVSS----KEAGVIIGKGGKNVADLREETGVKAGVSKVV 89
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T+SG + + AY+ + RSL +
Sbjct: 90 QGVYDRVLTISGGCEA----------------------ISRAYSVVARSLLEGAPTMGMG 127
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++N P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 128 GVIQNNGTHPI--KLLISHNQMGTIIGRQGLKIKYIQDVSGVRMVAQKEMLPQSTERIVE 185
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEY 231
V G P+ I +A+++IC L++ Q G V+ Y P +T G +SGG +Y
Sbjct: 186 VQGTPEGIQRAVWEICKCLVD-DWQRGTGTVL-YNPVVRTQGVGAPGISGGSSY------ 237
Query: 232 AVPVQEVAGKKQPHPLAGLAVL------GIEGIGSTSLT------PAALAALSGSRVKSG 279
+Q+ A P G V G GS T PAA R
Sbjct: 238 ---MQDRA------PYGGSRVTRTGNGADFSGGGSRPYTRRSDSDPAA-------RGPPT 281
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQ 337
+ G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I
Sbjct: 282 HDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIM 341
Query: 338 GCQEAVSLAQYLINMCIELQK 358
G +A A +L+ +E +K
Sbjct: 342 GSAKANETALFLLYENLEAEK 362
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 105/186 (56%), Gaps = 37/186 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIE 194
C V++E
Sbjct: 167 CAVILE 172
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 9/117 (7%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L++++ GS+IGK G +K IR+ S A + ++ P ERI T+ G+ +
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCP---ERITTITGSTAAVFH 74
Query: 184 AIYQICLVLIE--CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
A+ I L E C G + P T+ +++ Q +L G+ ++E+
Sbjct: 75 AVSMIAFKLDEDLCAAP-ANGGSVSRPPVTLR---LVIPASQCGSLIGKAGTKIKEI 127
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 171/379 (45%), Gaps = 54/379 (14%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG + DE+ T +T+R + S E +IG GG V LR E+G K ++
Sbjct: 34 DGEPAPRTDEEYSQTTLTLRAIVSS----KEAGVIIGKGGQNVANLRDETGVKAGVSKVV 89
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
DR++T++G D V AY + RSL + +
Sbjct: 90 QGVHDRVLTITGGCDA----------------------VSKAYAAVARSLLEGAPSVGMG 127
Query: 117 ENCSPQPLQ-LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVH 175
S LKL+I G++IG+ G KIK I+D+SG + +MLP STER+V V
Sbjct: 128 GVISANGTHPLKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQ 187
Query: 176 GNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV 235
G P+ I +A+++IC L++ Q G V+ Y P ++ G A GE P
Sbjct: 188 GTPEGIERAVWEICKCLVD-DWQRGTGTVL-YNP--------VVRGPGAPVSGGERNYPQ 237
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT----GDDFVETE 291
+ G + A S++ A S S S G T G++
Sbjct: 238 ERSYGSSRVTRTGNGADF------SSNSGGRAYNRRSDSDAASRGPPTHDENGEEIQTQN 291
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+AGS++ EIR+ SGA+I+I G ES ++MF I G +A A YL
Sbjct: 292 ISIPADMVGCIIGRAGSKISEIRKQSGARISIAKGPHDESGERMFTIMGSAKANETALYL 351
Query: 350 INMCIELQKNNTTNTSDNP 368
+ +E +K + + P
Sbjct: 352 LYENLEAEKTRRSQQALEP 370
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 175/374 (46%), Gaps = 62/374 (16%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K D++ T +T+R + S E +IG GG V LR+E+G K ++
Sbjct: 34 DGEPAPKTDQEYAQTQLTLRAIVSS----KEAGVIIGKGGKNVADLREETGVKAGVSKVV 89
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + RSL +
Sbjct: 90 QGVYDRVLTITGGCEA----------------------ISRAYAAVARSLLEGAPTMGMG 127
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++N P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 128 GVIQNNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 185
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEY 231
V G P+ I +A+++IC L++ Q G V+ Y P +T G +SGG Y
Sbjct: 186 VQGTPEGIQRAVWEICKCLVD-DWQRGTGTVL-YNPVVRTQGVGAPGISGGSGY------ 237
Query: 232 AVPVQEVAGKKQPHPLAGLAVLGI-EGIGSTSLTPAALAALSGSRVKSGGKDT----GDD 286
VQ+ A P G V G ++ P + S S + G T G++
Sbjct: 238 ---VQDRA------PYGGSRVTRTGNGADFSNGGPRSYNRRSDSDPSNRGPPTHDENGEE 288
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVS 344
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 289 IQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTSKANE 348
Query: 345 LAQYLINMCIELQK 358
A +L+ +E +K
Sbjct: 349 TALFLLYENLEAEK 362
>gi|336469496|gb|EGO57658.1| hypothetical protein NEUTE1DRAFT_116898 [Neurospora tetrasperma
FGSC 2508]
gi|350290860|gb|EGZ72074.1| hypothetical protein NEUTE2DRAFT_144709 [Neurospora tetrasperma
FGSC 2509]
Length = 371
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/379 (29%), Positives = 171/379 (45%), Gaps = 55/379 (14%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG + DE+ T +T+R + S E +IG GG V LR E+G K ++
Sbjct: 34 DGEPAPRTDEEYAQTTLTLRAIVSS----KEAGVIIGKGGQNVANLRDETGVKAGVSKVV 89
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
DR++T++G D V AY + RSL + +
Sbjct: 90 QGVHDRVLTITGGCDA----------------------VSKAYAVVARSLLEGAPSVGMG 127
Query: 117 ENCSPQPLQ-LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVH 175
S +KL+I G++IG+ G KIK I+D+SG + +MLP STER+V V
Sbjct: 128 GVISANGTHPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQ 187
Query: 176 GNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV 235
G P+ I +A+++IC L++ Q G V+ PV+ GGQ L G+ P
Sbjct: 188 GTPEGIQRAVWEICKCLVD-DWQRGTGTVL--------YNPVVRGGGQP--LGGDRNYPQ 236
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT----GDDFVETE 291
+ G + + G S++ S S S G T G++
Sbjct: 237 ERSYGSSR------VTRTGNGADFSSNSGGRPYNRRSDSDAASRGPPTHDENGEELQTQN 290
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+ G+++ EIR+ SGA+I+I G ES ++MF I G +A A YL
Sbjct: 291 ISIPADMVGCIIGRQGTKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYL 350
Query: 350 INMCIELQKNNTTNTSDNP 368
+ +E +K + + P
Sbjct: 351 LYENLEAEKTRRSQQAQEP 369
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 121 bits (304), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 173/394 (43%), Gaps = 75/394 (19%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 103 DESNWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ PL
Sbjct: 158 SGPQDA----------------------VAKAFGLIIRTLNNEPLDAASTAQSKTYPL-- 193
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + + G D + A Y
Sbjct: 194 RLLIPHILIGSIIGKGGTRIREIQDASGARLNASDACLPLSTERSLVILGVADAVHIATY 253
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---PVILS-- 220
+ + L+E + G V+PY P+ P
Sbjct: 254 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRH 313
Query: 221 -GGQAYTLHGEYAVPVQEVAGKKQPHPLA------GLAVLGIEGIGSTSLTPAALAALSG 273
GQA G Y VP + G+ P P+A G G G TP +
Sbjct: 314 HPGQARAGAGAYGVPY--LHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQ 371
Query: 274 SR------VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
R GG G + +I + +D+ G +IGK G+++ EIR +SG+ I I+
Sbjct: 372 PRGGPTPAAPVGGAMPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQ 430
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
E S++++ I G QE +A Y++ +E +K+
Sbjct: 431 ENSNERLVTITGTQECNQMALYMLYSRLESEKHR 464
>gi|85109816|ref|XP_963102.1| hypothetical protein NCU06251 [Neurospora crassa OR74A]
gi|28924753|gb|EAA33866.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 371
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 170/379 (44%), Gaps = 55/379 (14%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG + DE+ T +T+R + S E +IG GG V LR E+G K ++
Sbjct: 34 DGEPAPRTDEEYAQTTLTLRAIVSS----KEAGVIIGKGGQNVANLRDETGVKAGVSKVV 89
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
DR++T++G D V AY + RSL + +
Sbjct: 90 QGVHDRVLTITGGCDA----------------------VSKAYAVVARSLLEGAPSVGMG 127
Query: 117 ENCSPQPLQ-LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVH 175
S +KL+I G++IG+ G KIK I+D+SG + +MLP STER+V V
Sbjct: 128 GVISANGTHPIKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERVVEVQ 187
Query: 176 GNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV 235
G P+ I +A+++IC L++ Q G V+ PV+ GGQ L G+ P
Sbjct: 188 GTPEGIQRAVWEICKCLVD-DWQRGTGTVL--------YNPVVRGGGQP--LGGDRNYPQ 236
Query: 236 QEVAGKKQPHPLAGLAVL----GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
+ G + A G S + AA SR + G++
Sbjct: 237 ERSYGSSRVTRTGNGADFSSNSGGRPYNRRSDSDAA------SRGPPTHDENGEEIQTQN 290
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+ GS++ EIR+ SGA+I+I G ES ++MF I G +A A YL
Sbjct: 291 ISIPADMVGCIIGRQGSKISEIRKASGARISIAKGPHDESGERMFTIMGSAKANETALYL 350
Query: 350 INMCIELQKNNTTNTSDNP 368
+ +E +K + + P
Sbjct: 351 LYENLEAEKTRRSQQALEP 369
>gi|170060296|ref|XP_001865738.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167878802|gb|EDS42185.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 188
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/148 (43%), Positives = 97/148 (65%), Gaps = 21/148 (14%)
Query: 47 ESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL 106
+SGAKI+I+DG+CP+RIVTVSGS S++ Y TL + + C
Sbjct: 4 KSGAKINISDGSCPERIVTVSGS-----RSAI---YKAFTL-------ITKKFEEWCSQF 48
Query: 107 EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM 166
+D + + + + ++L++PA+ CGSLIGKGG KIK+IR+++G ++QVAS+MLP
Sbjct: 49 QDNTNAQGKTQ------IPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQVASEMLPN 102
Query: 167 STERIVTVHGNPDTISQAIYQICLVLIE 194
STER VT+ G+ D+I+Q IY IC V++E
Sbjct: 103 STERAVTLSGSADSITQCIYHICCVMLE 130
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 168/384 (43%), Gaps = 75/384 (19%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 103 DESNWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ PL
Sbjct: 158 SGPQDA----------------------VAKAFGLIIRTLNNEPLDAASTAQSKTYPL-- 193
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + + G D + A Y
Sbjct: 194 RLLIPHILIGSIIGKGGTRIREIQDASGARLNASDACLPLSTERSLVILGVADAVHIATY 253
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---PVILS-- 220
+ + L+E + G V+PY P+ P
Sbjct: 254 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRH 313
Query: 221 -GGQAYTLHGEYAVPVQEVAGKKQPHPLA------GLAVLGIEGIGSTSLTPAALAALSG 273
GQA G Y VP + G+ P P+A G G G TP +
Sbjct: 314 HPGQARAGAGAYGVPY--LHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQ 371
Query: 274 SR------VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
R GG G + +I + +D+ G +IGK G+++ EIR +SG+ I I+
Sbjct: 372 PRGGPTPAAPVGGAMPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQ 430
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLI 350
E S++++ I G QE +A Y++
Sbjct: 431 ENSNERLVTITGTQECNQMALYML 454
>gi|358252903|dbj|GAA50475.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 859
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 100/183 (54%), Gaps = 41/183 (22%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
E+ +IG G V++ R+ESGA+I+I+DG+ P+RIVT++G+ +
Sbjct: 210 EVGSIIGKRGENVKKYREESGARINISDGSSPERIVTITGTTEQ---------------- 253
Query: 89 VTSVDNVCTAYNFMCRSLED-YHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+ A+ M + ED + RM AT CGS+IGKGG +IK
Sbjct: 254 ------ISVAFTLMSQKFEDDFTQGLLRM---------------ATQCGSIIGKGGSRIK 292
Query: 148 DIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPY 207
++R+L+GA++QVAS+ LP STER VT+ G IS+ + +C + ++ KG VIPY
Sbjct: 293 EVRELTGASIQVASEALPASTERTVTISGAAKAISKCVRHLCDIFVDSP---AKGPVIPY 349
Query: 208 EPK 210
PK
Sbjct: 350 RPK 352
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQE 341
T ++ V E+++++++ GC+IG+ G+ + EIR IS AQI I + K + + G +
Sbjct: 668 TTEEPVTRELIISNELIGCIIGRGGTTVNEIRNISKAQIKISNCEDGAKERKITLSGPMQ 727
Query: 342 AVSLAQYLINMCI 354
AV+LAQ+LIN I
Sbjct: 728 AVNLAQFLINNSI 740
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L ++L++ GS+IGK G +K R+ SGA + ++ P ERIVT+ G + IS
Sbjct: 200 LIVRLLMSGKEVGSIIGKRGENVKKYREESGARINISDGSSP---ERIVTITGTTEQISV 256
Query: 184 AI 185
A
Sbjct: 257 AF 258
>gi|156051102|ref|XP_001591512.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980]
gi|154704736|gb|EDO04475.1| hypothetical protein SS1G_06958 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 371
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/377 (28%), Positives = 170/377 (45%), Gaps = 63/377 (16%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ + +T+R + S E +IG GG V LR E+G K ++ DR
Sbjct: 40 KTDEEYAESQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDR 95
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++T+SG D+ + AY+ + ++L + + N
Sbjct: 96 VLTISGGCDS----------------------ISRAYSIVAKALLEGAPQMGMGGVVSNN 133
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV V GNP+
Sbjct: 134 GTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGNPE 191
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEYAVPVQE 237
I +A+++IC L++ + G V+ Y P +T G +S G EY
Sbjct: 192 GIQKAVWEICKCLVDDWARGT-GTVL-YNPVVRTQTGGSGGMSQGNLGGTGREYGSSRVM 249
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG----KDTGDDFVETEIV 293
G G + P + S S G + G++ I
Sbjct: 250 RTGN---------------GADFSEGAPRSYNRRSDSDAAQRGPPTHDENGEELQTQNIS 294
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLI- 350
+ D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+
Sbjct: 295 IPSDMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMFTIMGTAKANDSALYLLY 354
Query: 351 -NMCIELQKNNTTNTSD 366
N+ E Q+ + N +
Sbjct: 355 ENLEAEKQRRSQGNAQE 371
>gi|58266068|ref|XP_570190.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134110914|ref|XP_775921.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258587|gb|EAL21274.1| hypothetical protein CNBD3280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226423|gb|AAW42883.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 365
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSV 78
S V+ E +IG G + +R +G K ++ DR+++V+G ++
Sbjct: 33 LRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEG------ 86
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL----QLKLVIPATH 134
V +AY + R L + ++ + + P P+ ++L+I
Sbjct: 87 ----------------VASAYAEVARLLLETPLSDSSL---PPPPVGSFTSIRLLISHNL 127
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G++IG+ G KIK I+D+SGA + + +MLP STER+V V G+ D I A+ +I L+E
Sbjct: 128 MGTVIGRSGLKIKQIQDMSGARMVASKEMLPQSTERVVEVQGSVDAIKTAVLEIGKCLLE 187
Query: 195 CTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
+GA + Y P V+ G A + G G ++ AG
Sbjct: 188 ---DWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTG-------STGGIRRTSVAAGFGGY 237
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGK--DTGDDFVETE-IVLTDDIAGCVIGKAGSRL 310
+ S + + + +SG R S G + D + T+ I + D+ GC+IG+ GS++
Sbjct: 238 SGDRRPSRGGSISGPSGVSGERRPSEGPQVNLNDPNLRTQNISIPSDMVGCIIGRGGSKI 297
Query: 311 LEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
EIR++SG++I+I E+ ++MF IQG EA A L+ +E +K N S++
Sbjct: 298 TEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLLYSQLESEKERRVNGSNSE 357
Query: 369 EPADLDAA 376
PA D A
Sbjct: 358 VPASADFA 365
>gi|405120191|gb|AFR94962.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 365
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 172/368 (46%), Gaps = 47/368 (12%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSV 78
S V+ E +IG G + +R +G K ++ DR+++V+G ++
Sbjct: 33 LRSLVSTKEAGIIIGKSGATIATIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEG------ 86
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL----QLKLVIPATH 134
V +AY + R L + ++ + + P P+ ++L+I
Sbjct: 87 ----------------VASAYAEVARLLLETPLSDSSL---PPPPVGSFTSIRLLISHNL 127
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G++IG+ G KIK I+D+SGA + + +MLP STER+V V G+ D I A+ +I L+E
Sbjct: 128 MGTVIGRSGLKIKQIQDMSGARMVASKEMLPQSTERVVEVQGSVDAIKTAVLEIGKCLLE 187
Query: 195 CTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
+GA + Y P V+ G A + G G ++ AG
Sbjct: 188 ---DWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTG-------STGGIRRTSVAAGFGGY 237
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGK--DTGDDFVETE-IVLTDDIAGCVIGKAGSRL 310
+ S + + + +SG R S G + D + T+ I + D+ GC+IG+ GS++
Sbjct: 238 SGDRRPSRGGSISGPSGVSGERRPSEGPQVNLNDPNLRTQNISIPSDMVGCIIGRGGSKI 297
Query: 311 LEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
EIR++SG++I+I E+ ++MF IQG EA A L+ +E +K N S++
Sbjct: 298 TEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLLYSQLESEKERRVNGSNSE 357
Query: 369 EPADLDAA 376
PA D A
Sbjct: 358 VPASTDFA 365
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 140/311 (45%), Gaps = 72/311 (23%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG G V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 110 IHMRCL----IVTQDASIIIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 165
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D ++ + + + +K +IP
Sbjct: 166 ----------------------VSKAFGLIVRRINDEPFDKPSVPGS--RAVTIKFMIPN 201
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 202 SRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNIL 261
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
IE ++ Y P + + G VP+ + QPH
Sbjct: 262 IEANERMPSYQNSSYRPSSTSR--------SRAPYQGSSYVPIGHASALLQPH------- 306
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
A G+++++ +I + +D+ GC+IGK GS++ E
Sbjct: 307 ----------------APPPGAQLQT-----------QQIYIPNDLVGCIIGKGGSKINE 339
Query: 313 IRQISGAQINI 323
IR +S +QI I
Sbjct: 340 IRHVSASQIKI 350
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 51/223 (22%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ ++ SGA+++ ++G P +R+++VSG D
Sbjct: 193 VTIKFMIPNS----RMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 248
Query: 72 NSSTSSVETGYPGHTL-----WVTSVDNVCTAYNFMCRSLEDY---------HINRNRME 117
+ T Y G+ L + S N + RS Y H +
Sbjct: 249 ---AIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQP 305
Query: 118 NCSPQPLQLK---LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST------ 168
+ P QL+ + IP G +IGKGG KI +IR +S + +++ M P +
Sbjct: 306 HAPPPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKI---MEPGAVGVGMNG 362
Query: 169 ----------ERIVTVHGNPDTISQAIYQICLVLIECTLQVVK 201
ER+V + G P+ I QI + L+ L+ K
Sbjct: 363 QPAPAAAHEGERLVVITGAPNNI-----QIAVQLLYSRLEQEK 400
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK G+++ EI+ SGA++N G S +++ + G +
Sbjct: 189 GSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 248
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTSDNPEPADLDAAISAFMTASV-----NSSLIEKPTP 395
A+ +A Y I N+ IE + + + + P+ + + + +S S+L++ P
Sbjct: 249 AIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPHAP 308
Query: 396 HPGSMV 401
PG+ +
Sbjct: 309 PPGAQL 314
>gi|346324545|gb|EGX94142.1| KH domain RNA-binding protein [Cordyceps militaris CM01]
Length = 420
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 109/385 (28%), Positives = 171/385 (44%), Gaps = 56/385 (14%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + V+ E +IG GG V LR E+G K ++
Sbjct: 31 DGEPAPKTDEEYAQAQLTLRAI----VSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 87 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPAMGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 125 GVVQGNGTHPI--KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHG-- 229
V G P+ I +A+++IC L++ Q G V+ Y P +T ++ G
Sbjct: 183 VQGTPEGIQRALWEICKCLVD-DWQRGTGTVL-YNPVVRTQAGTTGSTGSTGSFAATGNT 240
Query: 230 --EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
EY+ P G G G S + AA SR + G++
Sbjct: 241 RAEYSTPRVMRTGNGSDFSNGG----GSRPFSRRSDSDAA------SRGPPTHDENGEEI 290
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSL 345
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 291 QTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANES 350
Query: 346 AQYLINMCIELQKNNTTNTSDNPEP 370
A +L+ +E +K + D EP
Sbjct: 351 ALFLLYENLEAEKMRRSQLQDTDEP 375
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 171/367 (46%), Gaps = 54/367 (14%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ T +T+R + S E +IG GG V LR E+G K ++ DR
Sbjct: 37 KTDEEYAQTQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDR 92
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++T++G D + AY + R+L + ++
Sbjct: 93 VLTITGGCDA----------------------ISKAYAVVARALLEGVPTMGMGGILQGN 130
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ KL+I G++IG+GG KIK I+D+SG + D+LP STERIV V G P+
Sbjct: 131 GTHPI--KLLISHNQMGTVIGRGGLKIKHIQDVSGVRMVAQKDILPQSTERIVEVQGTPE 188
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEYAVPVQE 237
I +A+++IC L++ Q G V+ Y P +T P + SG A T + Y
Sbjct: 189 GIQKAVWEICKCLVD-DWQRGTGTVL-YNPVVRTQGTSPTLGSGSIAPTSN--YN----- 239
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT----GDDFVETEIV 293
+G + + + + G S + S S + G T G++ I
Sbjct: 240 -SGGRSEYGNSRVTRTGNGADFSNGASSRPNNRRSDSDAAARGPPTHDEQGNEIQTQNIS 298
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLIN 351
+ D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A +L+
Sbjct: 299 IPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETALFLLY 358
Query: 352 MCIELQK 358
+E +K
Sbjct: 359 ENLEAEK 365
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 171/379 (45%), Gaps = 67/379 (17%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ + +T+R + S E +IG GG V LR E+G K ++ DR
Sbjct: 40 KTDEEYAESQLTLRAIVSSK----EAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDR 95
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++T+SG D+ + AY+ + ++L + + N
Sbjct: 96 VLTISGGCDS----------------------ISRAYSIVAKALLEGAPQMGMGGVVSNN 133
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ KL+I G++IG+ G KIK I+D SG + +MLP STERIV V GNP+
Sbjct: 134 GTHPI--KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGNPE 191
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP----KTMNAGPVILSGGQAYTLHGEYAVPV 235
I +AI++IC L++ + G V+ Y P +T N+G +S G EY
Sbjct: 192 GIQKAIWEICKCLVDDWARGT-GTVL-YNPMVRTQTGNSGG--MSQGNVGGTGREYGSSR 247
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG----KDTGDDFVETE 291
G G + P + S S G + G++
Sbjct: 248 VMRTGN---------------GADFSESAPRSYNRRSESDAAQRGPPTHDENGEELQTQN 292
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A YL
Sbjct: 293 ISIPADMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMFTIMGTAKANDSALYL 352
Query: 350 I--NMCIELQKNNTTNTSD 366
+ N+ E Q+ + N +
Sbjct: 353 LYENLEAEKQRRSQGNAQE 371
>gi|407917412|gb|EKG10721.1| K-like protein [Macrophomina phaseolina MS6]
Length = 488
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 176/397 (44%), Gaps = 76/397 (19%)
Query: 7 GKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRI 63
G DE + +R + S+ E + +IG GG V ++R+ SGAK +++D GA +RI
Sbjct: 124 GHQDESNWLHVRAIISSA----EAATVIGKGGENVTQIRRMSGAKCTVSDYSRGAV-ERI 178
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+TVSG VD V A+ + R+L + +N P
Sbjct: 179 LTVSGLVDA----------------------VAKAFGLIIRTLNNEDLNSPSTPQSKTYP 216
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L +L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D +
Sbjct: 217 L--RLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVVLGVADAVHI 274
Query: 184 AIYQICLVLIECTLQVVKGA---------------------VIPYEPKTMNA--GPV--- 217
A Y + L+E + G V+PY P+ GP
Sbjct: 275 ATYYVGSTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQPAGGQWGPPDTF 334
Query: 218 ---------ILSGGQAYTLHGEYA----VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
+ G +HG+Y P+ AG + H G + G+ +
Sbjct: 335 HRKGPQAQRTPAAGYGAPMHGQYPQQPQAPLHYGAGSPR-HAYTGAGPHQPQQYGAPHVA 393
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
+ A ++ G G + +I + +D+ G +IGK G+++ EIRQ+SG+ I I+
Sbjct: 394 QPSHAGQPAQPMQ--GMMPGQPMTQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKIN 450
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+ S++++ I G QE +A Y++ +E +K+
Sbjct: 451 EPQDNSNERLVTITGTQECNQMALYMLYSRLESEKHR 487
>gi|400593892|gb|EJP61786.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 373
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 167/379 (44%), Gaps = 51/379 (13%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + V+ E +IG GG V LR E+G K ++
Sbjct: 30 DGEPAPKTDEEYAQAQLTLRAI----VSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV 85
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 86 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPAMGMG 123
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 124 GILQGNGTHPI--KLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 181
Query: 174 VHGNPDTISQAIYQICLVLIE----CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG 229
V G P+ I +A+++IC L++ T V+ V+ +P T S G
Sbjct: 182 VQGTPEGIQRALWEICKCLVDDWQRGTGTVLYNPVVRTQPGTTGGTGSTGSFGATGNGRA 241
Query: 230 EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
EY+ P G G G T + + SR + G++
Sbjct: 242 EYSSPRVMRTGNGSDFSNGG---------GGTRPFSRRSDSDAASRGPPTHDENGEEIQT 292
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQ 347
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A
Sbjct: 293 QNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESAL 352
Query: 348 YLINMCIELQKNNTTNTSD 366
+L+ +E +K + D
Sbjct: 353 FLLYENLEAEKMRRSQLQD 371
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 108/374 (28%), Positives = 169/374 (45%), Gaps = 57/374 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G + ++
Sbjct: 30 DGGPAPKTDEEYAQAQLTVRAIVSSK----EAGVIIGKGGKNVADLRDETGVRAGVSKVV 85
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 86 QGVHDRVLTITGGCDA----------------------ISKAYAIVARALLEGAPTLGMG 123
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G KIK I+D+SG + DMLP S ER+V
Sbjct: 124 GVVQSNGTHPI--KLLISHNQMGTIIGREGLKIKHIQDVSGVRMVAQKDMLPQSNERVVE 181
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAG-PVILSGGQAYTLHGE 230
V G P+ I +A+++IC LI+ Q G V+ Y P +T G P + +GG Y G
Sbjct: 182 VQGTPEGIQRAVWEICKCLID-DWQRATGTVL-YNPAVRTQPGGAPPLTTGGPGYNSTG- 238
Query: 231 YAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT----GDD 286
G P G + S TP S S + G T G++
Sbjct: 239 -------ARGDYGSSPRVTRTGNGAD--FSNGSTPRLYNRRSDSDAANRGPPTHDENGEE 289
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVS 344
I + ++ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 290 IQTQNISIPANMVGCIIGRAGSKISEIRKASGARISIAKAPHDETGERMFTIMGSAKANE 349
Query: 345 LAQYLINMCIELQK 358
A +L+ +E +K
Sbjct: 350 SALFLLYENLEAEK 363
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 79/314 (25%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 64 IHMRCL----IVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 119
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 120 ----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIPN 155
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 156 SRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTIL 215
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---AYTLHGEYAVPVQEVAGKKQPHPLAG 249
IE ++ + Y P + P G Y+ H Y P
Sbjct: 216 IEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP--------------- 260
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
+ +I + +D+ GC+IGK GS+
Sbjct: 261 -------------------------------HNPPQQLQTQQIYIPNDLVGCIIGKGGSK 289
Query: 310 LLEIRQISGAQINI 323
+ EIR +S +QI I
Sbjct: 290 INEIRHMSASQIKI 303
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 47/218 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ ++ SGAK++ ++G P +R+++V+G D
Sbjct: 147 VTIKFMIPNS----RMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVAD 202
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-----------------YHINRN 114
+ T Y G T+ + + + + + N R +H
Sbjct: 203 ---AIHIATYYIG-TILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYG 258
Query: 115 RMENCSPQPLQLK-LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST----- 168
N PQ LQ + + IP G +IGKGG KI +IR +S + +++ M P +T
Sbjct: 259 PPHNP-PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKI---MEPGATGLGPN 314
Query: 169 --------ERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
ER+V + G P I A+ Q+ +E Q
Sbjct: 315 GAPGGSEGERLVVITGQPANIQMAV-QLLYHRLEQEKQ 351
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 143 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVAD 202
Query: 342 AVSLAQYLIN-MCIELQKN--NTTNTSDNP 368
A+ +A Y I + IE Q+ +T+N++ P
Sbjct: 203 AIHIATYYIGTILIEAQERMPSTSNSTYRP 232
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 133/314 (42%), Gaps = 79/314 (25%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 64 IHMRCL----IVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 119
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 120 ----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIPN 155
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 156 SRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADAIHIATYYIGTIL 215
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQ---AYTLHGEYAVPVQEVAGKKQPHPLAG 249
IE ++ + Y P + P G Y+ H Y P
Sbjct: 216 IEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP--------------- 260
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
+ +I + +D+ GC+IGK GS+
Sbjct: 261 -------------------------------HNPPQQLQTQQIYIPNDLVGCIIGKGGSK 289
Query: 310 LLEIRQISGAQINI 323
+ EIR +S +QI I
Sbjct: 290 INEIRHMSASQIKI 303
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 47/218 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ ++ SGAK++ ++G P +R+++V+G D
Sbjct: 147 VTIKFMIPNS----RMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVAD 202
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-----------------YHINRN 114
+ T Y G T+ + + + + + N R +H
Sbjct: 203 ---AIHIATYYIG-TILIEAQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYG 258
Query: 115 RMENCSPQPLQLK-LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST----- 168
N PQ LQ + + IP G +IGKGG KI +IR +S + +++ M P +T
Sbjct: 259 PPHNP-PQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKI---MEPGATGLGPN 314
Query: 169 --------ERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
ER+V + G P I A+ Q+ +E Q
Sbjct: 315 GAPGGSEGERLVVITGQPANIQMAV-QLLYHRLEQEKQ 351
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 143 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVAD 202
Query: 342 AVSLAQYLIN-MCIELQKN--NTTNTSDNP 368
A+ +A Y I + IE Q+ +T+N++ P
Sbjct: 203 AIHIATYYIGTILIEAQERMPSTSNSTYRP 232
>gi|322707130|gb|EFY98709.1| KH domain RNA-binding protein [Metarhizium anisopliae ARSEF 23]
Length = 368
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/371 (29%), Positives = 169/371 (45%), Gaps = 57/371 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 31 DGEPAPKTDEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 87 QGVHDRVLTITGECDA----------------------ISRAYAIVARALLEGAPAMGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 125 GIVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTM-NAGPVILSGGQAYTLHG--- 229
V G PD I +A+++IC L++ Q G V+ Y P AG L G Y G
Sbjct: 183 VQGTPDGIQRAVWEICKCLVD-DWQRGTGTVL-YNPVVRTQAGSGSL--GSNYNNGGGRS 238
Query: 230 EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
+Y P G A + G+ S + AA SR + G++
Sbjct: 239 DYGSPRVMRTGNG-----ADFSNGGVRPFSRRSDSDAA------SRGPPTHDENGEEIQT 287
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQ 347
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A
Sbjct: 288 QNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESAL 347
Query: 348 YLINMCIELQK 358
+L+ +E +K
Sbjct: 348 FLLYENLEAEK 358
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/319 (28%), Positives = 151/319 (47%), Gaps = 46/319 (14%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
++RLR E A +++ D P+R++T++ + +N S E + +D
Sbjct: 52 IKRLRSEFDANLTVPDSQTPERVLTLTATTENISNCLREI--------IPRLDE------ 97
Query: 101 FMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
+ ED H R + + ++K+++ +H G++IG+GG +IK++R+ +GA ++V
Sbjct: 98 ----NREDDHDRRGKKADRPDS--EMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVF 151
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS 220
S P STERIV ++G + I I I VL E +KG V PY+P M P I+S
Sbjct: 152 SRCAPQSTERIVLLNGEVEKIIDCINIIIDVLKEIP---IKGPVRPYDP--MYYDPDIIS 206
Query: 221 GGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG 280
Y + V G+ + + G + S P SG R G
Sbjct: 207 DYGGYVPDRNFISRV----GRGRDYGFGGSVI--------PSRYPGRDDRYSGMRDMIGR 254
Query: 281 KDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-----KMFH 335
T++ + D++ G +IGK GSR+ +R+ SGAQI + E H+ ++
Sbjct: 255 YSPIPAMQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIEV----EPHRDNGGDRIIT 310
Query: 336 IQGCQEAVSLAQYLINMCI 354
I G +E + AQYL+ C+
Sbjct: 311 ISGTREQIQAAQYLLQQCV 329
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/372 (29%), Positives = 172/372 (46%), Gaps = 56/372 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 30 DGEPAPKTDEEYAQAQLTVRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 85
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + R+L + +
Sbjct: 86 QGVHDRVLTITGGCEG----------------------ISKAYAVVARALLEGAPSMGMG 123
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+ N P+ KL+I G++IG+ G KIK I+D+SG + +MLP STER+V
Sbjct: 124 GVVSNNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERVVE 181
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVIL-SGGQAY--TLH 228
V G P+ I +A+++IC LI+ Q G V+ Y P +T AG + S G Y +
Sbjct: 182 VQGTPEGIQRAVWEICKCLID-DWQRGTGTVL-YNPVVRTQPAGATQMGSSGAGYGTSNR 239
Query: 229 GEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
G+Y+ G A + G S + AA +R + G++
Sbjct: 240 GDYSSSRVTRTGNG-----ADFSNGGGRSYNRRSDSDAA------NRGPPTHDENGEEIQ 288
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLA 346
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A
Sbjct: 289 TQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANETA 348
Query: 347 QYLINMCIELQK 358
+L+ +E +K
Sbjct: 349 LFLLYENLEAEK 360
>gi|402593291|gb|EJW87218.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 359
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 74/332 (22%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
++RLR E A +++ D P+RI T+ V +V+NV +
Sbjct: 61 IKRLRSEYDANVTVPDSQTPERIATI----------------------VATVENVLSIVT 98
Query: 101 FMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
+ L+D + E S +P++L++++ ++H G++IG+ G KIK++++ G ++V
Sbjct: 99 EIIPKLDDRTLQSR--EGDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVF 156
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYE------------ 208
+ P STER+V++ G PD I + I +L E +KG PYE
Sbjct: 157 AQCPPQSTERVVSIKGAPDKILACVNHIMNMLKEIP---IKGVTKPYESMFYDPSYSSEY 213
Query: 209 ----PKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
P GP+I G A T +G Y Q G + P L+
Sbjct: 214 GGYPPDRNYRGPMI-RGPMAVTSYGNYGRSFQRQIGGRGP------------------LS 254
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
AL G T++ + +++ G +IGK G R+ +R+ SGAQI +
Sbjct: 255 AVALPPYMGPEES------------TQVTIPNELGGTIIGKGGERINRVREESGAQIVVG 302
Query: 325 TGTESHKKMFHIQGCQEAVSLAQYLINMCIEL 356
ES +++ I G A+ AQYL+ + L
Sbjct: 303 PQQESGERIITITGTSTAIQTAQYLLQQWLVL 334
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 93/233 (39%), Gaps = 51/233 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP----DRIVT 65
D + I +R L HSS +IG G ++ +++E G ++ + CP +R+V+
Sbjct: 115 DSNRPIELRVLVHSS----HAGAVIGRQGSKIKEMKEELGVQMKVF-AQCPPQSTERVVS 169
Query: 66 VSGSVD------------------------------NSSTSSVETGYPGHTLWVTSVDN- 94
+ G+ D + S SS GYP + +
Sbjct: 170 IKGAPDKILACVNHIMNMLKEIPIKGVTKPYESMFYDPSYSSEYGGYPPDRNYRGPMIRG 229
Query: 95 --VCTAYNFMCRSLEDYHINRNRMENCSPQPL-----QLKLVIPATHCGSLIGKGGCKIK 147
T+Y RS + R + + P ++ IP G++IGKGG +I
Sbjct: 230 PMAVTSYGNYGRSFQRQIGGRGPLSAVALPPYMGPEESTQVTIPNELGGTIIGKGGERIN 289
Query: 148 DIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY--QICLVLIECTLQ 198
+R+ SGA + V S ERI+T+ G I A Y Q LVL+ L+
Sbjct: 290 RVREESGAQIVVGPQQ--ESGERIITITGTSTAIQTAQYLLQQWLVLVSLGLK 340
>gi|393907134|gb|EFO25357.2| hypothetical protein LOAG_03127 [Loa loa]
Length = 341
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 78/330 (23%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
++RLR E A +++ D P+RI T+ V +++NV
Sbjct: 61 IKRLRSEYDANVTVPDSQTPERIATI----------------------VATIENVLAIVT 98
Query: 101 FMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
+ L+D E S +P++L++++ ++H G++IG+ G KIK++++ G ++V
Sbjct: 99 EIIPKLDDSR------EGDSNRPIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVF 152
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYE------------ 208
+ P STER+V++ G PD I + I +L E +KG PYE
Sbjct: 153 AQCPPQSTERVVSIKGAPDKIIACVNHIMNMLKEIP---IKGVTKPYESMFYDPSYSAEY 209
Query: 209 ----PKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
P GP+I G A T +G Y G+ P + G L+
Sbjct: 210 GGYPPDRNYRGPMI-RGPMAMTSYGNY--------GRNFPRQIGGRG----------PLS 250
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
AL G T++ + +++ G +IGK G R+ +R+ SGAQI +
Sbjct: 251 AVALPPYMGPEES------------TQVTIPNELGGTIIGKGGERINRVREESGAQIVVG 298
Query: 325 TGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
ES +++ I G A+ AQYL+ C+
Sbjct: 299 PQQESGERIITITGTSTAIQTAQYLLQQCV 328
>gi|116180584|ref|XP_001220141.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88185217|gb|EAQ92685.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 485
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 172/414 (41%), Gaps = 100/414 (24%)
Query: 3 GNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GAC 59
G G DE I +R + S E + +IG GG V ++R+ SGAK +++D GA
Sbjct: 113 GPPPGAHDETAWIHVRAVISSP----EAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAV 168
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
+RI+TVSG VD V A+ + R+L + + ++
Sbjct: 169 -ERILTVSGIVDA----------------------VAKAFGLIIRTLNNEPLGEPSSQHS 205
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
PL +L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D
Sbjct: 206 KTYPL--RLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVAD 263
Query: 180 TISQAIYQICLVLIECTLQVVKGA---------------------VIPYEPKT------- 211
+ A Y + L+E + GA VIPY P+
Sbjct: 264 AVHIATYYVGSTLLEQLNERFGGASASAYATRSGGPAGAVPGGMQVIPYNPQPAGGNFGN 323
Query: 212 ---------------MNAGPVILSGGQAYTLHGEYAVPVQEVAGKK----------QPHP 246
M G + H A P+ QPHP
Sbjct: 324 RDNYHRGRPDPRAHHMPPQAYPPQYGHPHQPHPNPAAPMPYGGHAAAGGYGAGPHVQPHP 383
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
AG A P A G + G G + +I + +D+ G +IGK
Sbjct: 384 -AGPA------------GPHGPAGPHGQPMPGGAAVPGGPLTQ-QIYIPNDMVGAIIGKG 429
Query: 307 GSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
G ++ EIRQISG+ I I+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 430 GQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLESEKH 483
>gi|340914749|gb|EGS18090.1| putative pab1-binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 484
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 175/401 (43%), Gaps = 89/401 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGA+ +++D GA +RI+TV
Sbjct: 120 DETSWIHIRAVISSP----EAATIIGKGGENVTKIRQMSGARCTVSDYQKGAV-ERILTV 174
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + +N ++ PL
Sbjct: 175 SGIVDA----------------------VAKAFGLIIRTLNNEPLNEPSNQHSKTYPL-- 210
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 211 RLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 270
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKT-------------- 211
+ L+E + GA VIPY P+
Sbjct: 271 YVGSTLLEQLNERFGGAAASAYATRSGGPVGAVPGGMQVIPYNPQPAGGHYGNRDAYYRA 330
Query: 212 --------MNAGPVILSGGQ-AYTLHGEYAVPVQEVAGKKQPHPLAGLAV---LGIEGIG 259
M P G A+ +H A+P+ A P AG + +G
Sbjct: 331 RPDPRAHHMPPPPYAQPYGHPAHPVHPAAAMPMHYGAT-----PAAGYGPAPHVQPPHVG 385
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
PAA + G + +I + +D+ G +IGK G ++ EIRQISG+
Sbjct: 386 H----PAAHPHVGPHGQPVAGAHMPGQTITQQIYIPNDMVGAIIGKGGQKINEIRQISGS 441
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I I+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 442 VIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLENEKH 482
>gi|322698395|gb|EFY90165.1| KH domain RNA-binding protein [Metarhizium acridum CQMa 102]
Length = 367
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 169/376 (44%), Gaps = 68/376 (18%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 31 DGEPAPKTDEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-------- 108
DR++T++G D + AY + R+L +
Sbjct: 87 QGVHDRVLTITGECDA----------------------ISRAYAIVARALLEGAPAMGMG 124
Query: 109 --YHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM 166
N + + + +KL+I G++IG+ G KIK I+D+SG + +MLP
Sbjct: 125 GIVQSNGTHLSSTA-----IKLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQ 179
Query: 167 STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTM-NAGPVILSGGQAY 225
STERIV V G PD I +A+++IC L++ Q G V+ Y P AG L G Y
Sbjct: 180 STERIVEVQGTPDGIQRAVWEICKCLVD-DWQRGTGTVL-YNPVVRTQAGSGGL--GSNY 235
Query: 226 TLHG---EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
G +Y P G A + G+ S + AA SR +
Sbjct: 236 NNGGGRSDYGSPRVMRTGNG-----ADFSNGGVRPFSRRSDSDAA------SRGPPTHDE 284
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEA 342
G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I ++ ++MF I G +A
Sbjct: 285 NGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI---AKTGERMFTIMGTAKA 341
Query: 343 VSLAQYLINMCIELQK 358
A +L+ +E +K
Sbjct: 342 NESALFLLYENLEAEK 357
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 68/311 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 101 IHMRCL----IVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 156
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D ++ + + + +K +IP
Sbjct: 157 ----------------------VSKAFGLIVRRINDEPFDKPSVPGS--RAVTIKFMIPN 192
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 193 SRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGVADAIHIATYYIGNIL 252
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
IE ++ Y P + + P + G +Y YA A P+
Sbjct: 253 IEANERMPSSNHSTYRPTSQSRRPPYM--GSSYVPG--YAPAAAAAATAHNPY------- 301
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
+GG + +I + +D+ GC+IGK G+++ E
Sbjct: 302 -------------------------AGGPPS--QLQTQQIYIPNDLVGCIIGKGGAKINE 334
Query: 313 IRQISGAQINI 323
IR +S +QI I
Sbjct: 335 IRHMSASQIKI 345
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK G+++ EI+ SGA++N G S +++ + G +
Sbjct: 180 GSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGVAD 239
Query: 342 AVSLAQYLI-NMCIE 355
A+ +A Y I N+ IE
Sbjct: 240 AIHIATYYIGNILIE 254
>gi|321257616|ref|XP_003193652.1| cytoplasm protein [Cryptococcus gattii WM276]
gi|317460122|gb|ADV21865.1| Cytoplasm protein, putative [Cryptococcus gattii WM276]
Length = 367
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 49/370 (13%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSV 78
S V+ E +IG G + +R +G K ++ DR+++V+G ++
Sbjct: 33 LRSLVSTKEAGIIIGKSGATIAAIRDSTGVKAGVSKVVQGVQDRVLSVTGDLEG------ 86
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL----QLKLVIPATH 134
V +AY + R L + ++ + + P P+ ++L+I
Sbjct: 87 ----------------VASAYAEVARLLLETPLSDSSLP---PPPVGSFTSIRLLISHNL 127
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G++IG+ G KIK I+D+SGA + + +MLP STER+V V G+ D I A+ +I L+E
Sbjct: 128 MGTVIGRSGLKIKQIQDMSGARMVASKEMLPQSTERVVEVQGSVDAIKTAVLEIGKCLLE 187
Query: 195 CTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL 253
+GA + Y P V+ G A + G G ++ AG
Sbjct: 188 ---DWDRGAGTVLYHPGAAGDAGVLAGGLGAQAVTG-------STGGIRRTSVAAGFGGY 237
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGK--DTGDDFVETE-IVLTDDIAGCVI--GKAGS 308
+ S + + + +SG R S G + D + T+ I + D+ GC+I G+ GS
Sbjct: 238 SGDRRPSRGGSISGPSGVSGERKPSEGPQVNLNDPNLRTQNISIPSDMVGCIIISGRGGS 297
Query: 309 RLLEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
++ EIR++SG++I+I E+ ++MF IQG EA A L+ +E +K N S
Sbjct: 298 KITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEATERALMLLYSQLESEKERRVNGSG 357
Query: 367 NPEPADLDAA 376
+ PA D A
Sbjct: 358 SEAPASADFA 367
>gi|312370956|gb|EFR19248.1| hypothetical protein AND_22817 [Anopheles darlingi]
Length = 463
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 99/184 (53%), Gaps = 25/184 (13%)
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGS 260
KGA IPY PK GPVI++ GQAYT+ G YAVP QE P ++G GI G+
Sbjct: 53 KGATIPYRPKPQVNGPVIVANGQAYTIQGNYAVPAQETC-TVFPLAISGGLHAGISGLAD 111
Query: 261 T--------------SLTP---AALAALSGSRVKSGGKDTGDDFVET---EIVLTDDIAG 300
L P LAAL+GS++++ V++ E+ + +D+ G
Sbjct: 112 PLLKGTHLQGAIPPHHLQPIPDVTLAALAGSQLRTNTNRNVATQVQSQSHEMTVPNDLIG 171
Query: 301 CVIGKAGSRLLEIRQISGAQINIHTGTESHK----KMFHIQGCQEAVSLAQYLINMCIEL 356
C+IGK G+++ EIRQISGA I I E + I G ++V+LAQYLINM +EL
Sbjct: 172 CIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMSVEL 231
Query: 357 QKNN 360
QK N
Sbjct: 232 QKAN 235
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 112 NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTE 169
N NR Q ++ +P G +IGKGG KI +IR +SGA +++++ + +T+
Sbjct: 147 NTNRNVATQVQSQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTD 206
Query: 170 RIVTVHGNPDTISQAIYQICL 190
R +T+ GNPD+++ A Y I +
Sbjct: 207 RTITITGNPDSVALAQYLINM 227
>gi|390597786|gb|EIN07185.1| hypothetical protein PUNSTDRAFT_53562 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 160/371 (43%), Gaps = 87/371 (23%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 54 IHMRCL----IVTQDASIIIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGPLDA 109
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 110 ----------------------VSKAFGLIVRRINDEPFDSASVPGS--RAVTIKFMIPN 145
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I++ SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 146 SRMGSVIGKGGSKIKEIQEASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNIL 205
Query: 193 IECTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
IE + A P +GG +Y V G P+P
Sbjct: 206 IEANERQPHAANSSYRPSSYSRRPPYPATGGSSY------------VPGYTNPYP----- 248
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
P AAL+ ++++ +I + +D+ GC+IGK G+++
Sbjct: 249 -------------PPTAAALAHGQLQT-----------QQIYIPNDLVGCIIGKGGAKIN 284
Query: 312 EIRQISGAQINIH--------------TGTESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
EIR +S +QI I G+E ++++ I G + +A L+ +E +
Sbjct: 285 EIRHMSASQIKIMEPGATGQAGADGAPAGSE-NERLVVITGAPANIQMAVQLLYSRLEQE 343
Query: 358 KNNTTNTSDNP 368
K P
Sbjct: 344 KQKQLRAQQQP 354
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/374 (28%), Positives = 170/374 (45%), Gaps = 59/374 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + V+ E +IG GG V LR E+G K ++
Sbjct: 32 DGEPAPKTDEEYAQAQLTLRAI----VSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV 87
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 88 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPAMGMG 125
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G KIK I+D SG + +MLP STERIV
Sbjct: 126 GIVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVE 183
Query: 174 VHGNPDTISQAIYQICLVLIE----CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTL-- 227
V G P+ I +A+++IC L++ T V+ V+ +P + + + SGG Y+
Sbjct: 184 VQGTPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQPASSTS---VGSGGAGYSQGS 240
Query: 228 -HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDD 286
EY P G A + S + AA+ R + G++
Sbjct: 241 GRSEYGSPRVMRTGNG-----ADFSNGSSRPYNRRSDSDAAI------RGPPTHDENGEE 289
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVS 344
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 290 IQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANE 349
Query: 345 LAQYLINMCIELQK 358
A +L+ +E +K
Sbjct: 350 SALFLLYENLEAEK 363
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 168/389 (43%), Gaps = 78/389 (20%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIV 64
++DE + +R +S E + +IG GG V ++R+ SGAK +++D GA +RI+
Sbjct: 120 QVDETNWLHLRACIGTS----EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAV-ERIL 174
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMENCSPQ 122
TVSG VD V A+ + R+L ED P
Sbjct: 175 TVSGQVDA----------------------VSKAFGLIVRTLNQEDLEAPSTSTSKAYP- 211
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
++L+IP GS+IGK G +I++I++ S A + + +LP S ER + V G D +
Sbjct: 212 ---MRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPNSGERSLVVLGVADAVH 268
Query: 183 QAIYQICLVLIECTLQVVKG-AVIPYE----------PKTMNAGPVI--LSGGQAY---- 225
A+Y + L+E + G A Y P M+ P + +GGQ
Sbjct: 269 IAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYQQPNN 328
Query: 226 ---------TLHGEY-AVPVQEVAGKKQPHPLA------GLAVLGIEGIGSTSLTPAALA 269
HG Y A P + P P G G G P
Sbjct: 329 FRRQEPQRTPAHGGYGAAPHMQPGAPVHPSPYGQPQMPYGAGSPGRAHYGGPPQQPGPYG 388
Query: 270 ALSGSRVKSGGKDT-------GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
A G+ V GG G + +I + +D+ G +IGK G+++ EIRQ+SG+ I
Sbjct: 389 APQGAPVPHGGPPNQPPVSMPGQPLTQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIK 447
Query: 323 IHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I+ T+ S++++ I G QE +A Y++
Sbjct: 448 INEPTDNSNERLVTITGTQECNQMALYML 476
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 103/380 (27%), Positives = 166/380 (43%), Gaps = 64/380 (16%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
+ DED + +T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 39 RTDEDYAQSPLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDR 94
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
++TV+G++D V AY + ++L D
Sbjct: 95 VLTVTGNLDG----------------------VAKAYAMVAQTLVDSPPGAIPTTPMGTH 132
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ +L+I G++IG+ G KIK I+D+SG + +MLP STERIV V G+ D I
Sbjct: 133 PV--RLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGSADGIR 190
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMN-------AGPVILSGGQA--------YTL 227
QAI++I L++ Q G ++ Y P + + P ++S G A +T
Sbjct: 191 QAIWEIGKCLVD-DWQRGTGTIL-YNPAVRSNTSHGTGSSPSVISNGGAGTSGPTDRFTN 248
Query: 228 HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
PV+ G P G S + PA + G++
Sbjct: 249 ERPNRGPVRTGNGTDFSEPSPSFPRRGHSDSTSRASAPAP------------NTENGEEL 296
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSL 345
I + D+ GC+IG+ GS++ EIR+ SGA+I+I ++ ++MF I G ++
Sbjct: 297 QTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDDTGERMFTIVGSPQSNEK 356
Query: 346 AQYLINMCIELQKNNTTNTS 365
A YL+ +E +K + S
Sbjct: 357 ALYLLYENLEAEKTRRSQGS 376
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/320 (30%), Positives = 145/320 (45%), Gaps = 85/320 (26%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSV 70
+ I MRCL + + S +IG GG V +R++S AK+ +++ P+RI+ VSG++
Sbjct: 105 STIHMRCL----IVTQDASIIIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGAL 160
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP--QPLQLKL 128
D V A+ + R IN M P + + +K
Sbjct: 161 DA----------------------VSKAFGLIVR-----RINDEPMGPSVPGSRAVTIKF 193
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+IP + GS+IGKGG KIK+I++ SGA + + MLP STERI++V G D I A Y I
Sbjct: 194 IIPHSRMGSVIGKGGAKIKEIQEASGARLNASEGMLPGSTERILSVTGVADAIHIATYYI 253
Query: 189 CLVLIECTLQVVKGAV-IPYE----PKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ 243
+LI+ Q GAV + Y P+ N + GQ Y G+Y P
Sbjct: 254 GNILIQQ--QEAHGAVGLSYRQSRPPRAFNETMGGGAPGQQY-FPGQYQSP--------- 301
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
+ PAA V SG T +I + +D+ GC+I
Sbjct: 302 -------------------MMPAA--------VPSGPLQT------QQIYIPNDLVGCII 328
Query: 304 GKAGSRLLEIRQISGAQINI 323
GK G+++ EIRQ S +QI I
Sbjct: 329 GKGGAKINEIRQTSQSQIKI 348
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ G VIGK G+++ EI++ SGA++N G S +++ + G +
Sbjct: 185 GSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASEGMLPGSTERILSVTGVAD 244
Query: 342 AVSLAQYLI-NMCIELQK 358
A+ +A Y I N+ I+ Q+
Sbjct: 245 AIHIATYYIGNILIQQQE 262
>gi|367043886|ref|XP_003652323.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
gi|346999585|gb|AEO65987.1| hypothetical protein THITE_2113686 [Thielavia terrestris NRRL 8126]
Length = 482
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 170/397 (42%), Gaps = 81/397 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 118 DETAWIHIRAVISSP----EAATVIGKGGENVSKIRQMSGAKCTVSDYQKGAV-ERILTV 172
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + +N ++ PL
Sbjct: 173 SGIVDA----------------------VAKAFGLIIRTLNNEPLNEPSNQHSKTYPL-- 208
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 209 RLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 268
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ L+E + G V+PY P+ G +
Sbjct: 269 YVGSTLLEQLNERFGGPAASAYATRSGGPAGTVPGGMQVVPYNPQPAGGN----YGNRDN 324
Query: 226 TLHGE-----YAVPVQEVAGKK-QPHPLAGLAVLGIEGIGSTSLT--------------- 264
G Y +P Q A PHP + + +
Sbjct: 325 YYRGRQDPRAYHMPPQSYAPPYGHPHPAIPNPAVPMPYGAHAAGGYGAGPHVPVHHAGPA 384
Query: 265 -PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
P A G + G G + +I + +D+ G +IGK G ++ EIRQISG+ I I
Sbjct: 385 GPHGHAGPHGQPMPGGAGMPGAPLTQ-QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI 443
Query: 324 HTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 444 NEPQDNSNERLVTITGTEECNRIALYMLYSRLESEKH 480
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 169/372 (45%), Gaps = 57/372 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ T +T+R + S E +IG GG V LR E+G K ++
Sbjct: 34 DGEPAPKTDEEYAQTQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 89
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + R+L +
Sbjct: 90 QGVYDRVLTITGGCEA----------------------ISRAYAVVARALLEGAPTIGMG 127
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 128 GVVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 185
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAV 233
V G P+ I +AI++IC L++ Q G V+ Y P G G A + G
Sbjct: 186 VQGTPEGIQRAIWEICKCLVD-DWQRGAGTVL-YNPVVRTQG-----AGAAPGVTGTTNF 238
Query: 234 PVQEVAGKKQPHPLAGLAVLGI-EGIGSTSLTPAALAALSGSRVKSGGKDT----GDDFV 288
VQ+ A P G V G ++ P S S + G T G++
Sbjct: 239 -VQDRA------PYGGSRVTRTGNGADFSNGGPRPYNRRSDSDAAARGPPTHDENGEEIQ 291
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLA 346
I + D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A
Sbjct: 292 TQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDETGERMFTIMGSAKANERA 351
Query: 347 QYLINMCIELQK 358
+L+ +E +K
Sbjct: 352 LFLLYENLEAEK 363
>gi|403174064|ref|XP_003333074.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170814|gb|EFP88655.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 365
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 174/386 (45%), Gaps = 64/386 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D + +T+R L V+ E +IG GG V +R+++G K ++ DRI +VS
Sbjct: 16 DPASNVTLRAL----VSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVS 71
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-- 125
G ++ V AY + + I +N + P
Sbjct: 72 GGLEG----------------------VSKAYAIVAEA-----ILQNPLAATDPALTVPP 104
Query: 126 -------LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G P
Sbjct: 105 PTATTTIIRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGAP 164
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA-GP-----------VILSGGQAYT 226
D I AI++I L++ + G V+ Y+P + A GP Q ++
Sbjct: 165 DAIRVAIHEIGKCLMD-DWERAHGTVL-YQPGALGAEGPSAAYPGGVLAGGFGGANQGFS 222
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDD 286
+ P+ G +PL+G A ST++ + GS S + D
Sbjct: 223 NGRRSSAPL----GNANGNPLSGGARRA-SNYNSTNIENPPHRSREGSLGASLPPASTDQ 277
Query: 287 FVETE-IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAV 343
+ T+ I + D+ GC+IGK G+++ EIR++SG++I+I ES ++MF I G EA
Sbjct: 278 VLRTQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIAKTPHDESGERMFTIIGSPEAN 337
Query: 344 SLAQYLINMCIELQKNNTTNTSDNPE 369
A +L+ +E +K NT E
Sbjct: 338 EKALFLLYNQLESEKERRVNTVQEEE 363
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 171/369 (46%), Gaps = 51/369 (13%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 121 DESGWIHVRSVITSA----EAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAV-ERILTV 175
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + PL
Sbjct: 176 SGVVDA----------------------VAKAFGLIIRTLNNEPLEAPSDSTSKTYPL-- 211
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 212 RLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDSYLPLSTERSLVVLGVADAVHIATY 271
Query: 187 QICLVLIECTLQVVKG-AVIPYEPKTMNAGPVILSGGQAYTLHGEY----AVPVQEVAGK 241
+ L E + G A Y ++ V+ +T+ + +P+ G
Sbjct: 272 YVGSTLFEQLTERFGGPAASAYASRSGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGH 331
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPA--ALAALSGSRVKSG----GKDTGDDFVETEIVLT 295
P AV G G+G A A+ G+ G G G + +I +
Sbjct: 332 ASP------AVGGYGGVGPQQPQQAGHAVPQPHGATGPQGQPMPGAIPGQPLTQ-QIFIP 384
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+D+ G +IGK G+++ EIRQ+SG+ I I+ + S++++ I G E +A Y++ +
Sbjct: 385 NDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQMALYMLYSRL 444
Query: 355 ELQKNNTTN 363
E +++ ++
Sbjct: 445 ESERHRASS 453
>gi|358367184|dbj|GAA83803.1| KH domain RNA binding protein [Aspergillus kawachii IFO 4308]
Length = 468
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 173/412 (41%), Gaps = 108/412 (26%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 103 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D + A+ + R+L + ++ PL
Sbjct: 158 SGPQDAA----------------------AKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 193
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + + G D + A Y
Sbjct: 194 RLLIPHILIGSIIGKGGSRIREIQDASGARLNASDACLPLSTERSLVILGVADAVHIATY 253
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ + L+E + G V+PY P+
Sbjct: 254 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAG------------ 301
Query: 226 TLHGEYAVPVQEVAGKKQPHP----LAGLAVLGIEG-------------IGSTSLTPAAL 268
G+Y P + + PHP G V ++G G+T TP A
Sbjct: 302 ---GQYGHP--DTFKRHHPHPNRGAAGGYGVPYLQGPAAQTPVAQPSMPYGATPHTPYAG 356
Query: 269 AALSGSRVKS-------------------GGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
A GG G + +I + +D+ G +IGK G++
Sbjct: 357 AGPHQPAPYGAPQAAAAQARGGPTPAAPVGGVMPGQPLTQ-QIYIPNDMVGAIIGKGGAK 415
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+ EIR +SG+ I I+ E S++++ I G QE +A Y++ +E +K+
Sbjct: 416 INEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYMLYSRLESEKHR 467
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 172/402 (42%), Gaps = 110/402 (27%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 107 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 161
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ PL
Sbjct: 162 SGPQDA----------------------VAKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 197
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + + G D++ A Y
Sbjct: 198 RLLIPHILIGSIIGKGGSRIREIQEASGARLNASDACLPLSTERSLVILGVADSVHIATY 257
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ + L+E + G V+PY P+
Sbjct: 258 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAG------------ 305
Query: 226 TLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGI-------------------GSTSLTPA 266
G+Y P E + PHP A G G+ G+T TP
Sbjct: 306 ---GQYGHP--ETFKRHHPHP--NRAAAGAYGVPYLHGQPAPAPVAQPALHYGATPHTPY 358
Query: 267 ALAA-----------LSGSR------VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
A A + SR +GG G + +I + +D+ G +IGK G++
Sbjct: 359 AGAGPHQPAPYGAPQPAQSRGAPTPATPAGGVMPGQPLTQ-QIYIPNDMVGAIIGKGGAK 417
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ EIR +SG+ I I+ E S++++ I G QE +A Y++
Sbjct: 418 INEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML 459
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 47/354 (13%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACP 60
N + ++DE + +R +S E + +IG GG V ++R+ SGAK +++D GA
Sbjct: 115 NQNQQVDETNWLHVRACIGTS----EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAV- 169
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMEN 118
+RI+TVSG VD V A+ + R+L ED
Sbjct: 170 ERILTVSGQVDA----------------------VSKAFGLIVRTLNQEDLETPSTSTSK 207
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P ++L+IP GS+IGK G +I++I++ S A + + +LP S ER + V G
Sbjct: 208 AYP----MRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPNSGERSLIVLGVA 263
Query: 179 DTISQAIYQICLVLIECTLQVVKG-AVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQE 237
D + A+Y + L+E + G A Y ++ A V+ G + + VP
Sbjct: 264 DAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGG-----MSVQPYVPQPA 318
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDD 297
AG P G A G + A A + V G G + +I + +D
Sbjct: 319 GAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAV---GAMPGQPLTQ-QIFIPND 374
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ G +IGK G+++ EIRQ+SG+ I I+ T+ S++++ I G QE +A Y++
Sbjct: 375 MVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQECNQMALYML 428
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 175/401 (43%), Gaps = 92/401 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 114 DESSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 168
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + + PL
Sbjct: 169 SGIVDA----------------------VAKAFGLIIRTLNNEPLTEASTASSKTYPL-- 204
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 205 RLLIPHILIGSIIGKGGSRIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 264
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ L+E + G V+PY P+ P G+A
Sbjct: 265 YVGSTLLEQLNERFGGPAASAYATRSGAPVGSIPGGMQVVPYSPQ-----PASGHYGRAE 319
Query: 226 TL-------------------------HGEYAVPVQEVAGKKQPHPLA-GLAVLGIEGIG 259
HG A+P+Q AG+ P A G A ++
Sbjct: 320 NYGRHQERRPHHMPPAPYPQPYAHGAPHGTPAMPMQYGAGQ----PAAYGAAAPHVQPHM 375
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
+ P A A G + +G + +I + +D+ G +IGK G ++ EIRQ+SG+
Sbjct: 376 APHTGPQAHGAPQGQPMHAG---MPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGS 432
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I I+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 433 VIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLESEKH 473
>gi|310790849|gb|EFQ26382.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 471
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 171/408 (41%), Gaps = 103/408 (25%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 107 DERDWIHIRAVISSP----EAATIIGKGGENVSNIRKMSGAKCTVSDYQKGAV-ERILTV 161
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + + PL
Sbjct: 162 SGVVDAA----------------------AKAFGLIIRTLNNEPLAEPSSAQSKTYPL-- 197
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 198 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 257
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---------- 215
+ L+E G V+PY P+ G
Sbjct: 258 YVGSTLLEQLNDRFGGPAASAYATRSGGPAGVVPGGMQVVPYCPQPTTGGNYGNRENYNR 317
Query: 216 -----------PVILSGGQAYTLHGEYAVPVQEV------------AGKKQPHPLAGLAV 252
P G Q Y H P + A QPH AG AV
Sbjct: 318 RHDARAQHPGLPAAPYGAQPYPPHAAQPNPAMPIHYGAAQAGGYGAAAPMQPH--AGAAV 375
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
+ G+ P AA++G+ + +I + +D+ G +IGK G ++ E
Sbjct: 376 P--QPHGAHPAQPMHGAAVAGAPLTQ------------QIYIPNDMVGAIIGKGGQKINE 421
Query: 313 IRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
IRQISG+ I I+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 422 IRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLESEKH 469
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 161/367 (43%), Gaps = 62/367 (16%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ T +T+R L V+ E +IG GG V LR+E+G K ++
Sbjct: 35 DGEPAPKTDEEYAQTQLTLRAL----VSSKEAGVIIGKGGQNVANLREETGVKAGVSKVV 90
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D V AY + R+L + +
Sbjct: 91 QGVYDRVLTITGGCDA----------------------VSRAYAVVARALLEGAPAVSMG 128
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G +IK I+D+SG + +MLP STERIV
Sbjct: 129 GVVQHNGTHPI--KLLISHNQMGTIIGRQGQRIKYIQDVSGVRMVAQKEMLPQSTERIVE 186
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAV 233
V G P+ I +A+++IC L++ Q G V Y P Q H Y
Sbjct: 187 VQGTPEGIQRAVWEICKCLVD-DWQRGTGTVF-YNPAVRT---------QVGGFHDRYGS 235
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
V G G S + G R + G++ I
Sbjct: 236 RVLRTGNGAD-------FSNGSRSYGRRSDSEG------GPRGPPTHDENGEEIQTQNIS 282
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLIN 351
+ D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A +L+
Sbjct: 283 IPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANETALFLLY 342
Query: 352 MCIELQK 358
+E +K
Sbjct: 343 ENLEAEK 349
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 175/403 (43%), Gaps = 90/403 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 113 DESSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 167
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + ++ + PL
Sbjct: 168 SGIVDA----------------------VAKAFGLIIRTLNNEPLSEASTASSKTYPL-- 203
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 204 RLLIPHILIGSIIGKGGSRIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 263
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ L+E + G V+PY P+ P G+A
Sbjct: 264 YVGSTLLEQLNERFGGPGASAYATRSGAPVGSIPGGMQVVPYSPQ-----PASGHYGRAE 318
Query: 226 TL-------------------------HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGS 260
HG A+P+Q AG+ + G A ++ +
Sbjct: 319 NYGRHQERRPHHMPPAPYPQPYAHGAPHGAPAIPMQYGAGQPAAY---GAAAPHVQPHMA 375
Query: 261 TSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
P A A G + +G + +I + +D+ G +IGK G ++ EIRQ+SG+
Sbjct: 376 PHTGPQAHGAPQGQPMHAG---MPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSV 432
Query: 321 INIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTT 362
I I+ + S++++ I G +E +A Y++ + +N +T
Sbjct: 433 IKINEPQDNSNERLVTITGTEECNRMALYMLYSRLGETQNRST 475
>gi|380478963|emb|CCF43298.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 469
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 111/407 (27%), Positives = 172/407 (42%), Gaps = 102/407 (25%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 106 DERDWIHIRAVISSP----EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAV-ERILTV 160
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + + PL
Sbjct: 161 SGVVDAA----------------------AKAFGLIIRTLNNEPLAEPSSAQSKTYPL-- 196
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 197 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 256
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPK--TMNAG-------- 215
+ L+E G V+PY P+ T N G
Sbjct: 257 YVGSTLLEQLNDRFGGPAASAYATRSGGPAGVVPGGMQVVPYSPQPTTGNYGNRENYNRR 316
Query: 216 ----------PVILSGGQAYTLHGEYAVPVQEV------------AGKKQPHPLAGLAVL 253
P G Q Y H P + A QPH AG AV
Sbjct: 317 HDARAQHHGLPAAPYGAQPYPPHAAQPNPAMPIHYGAAQAGGYGAAAPMQPH--AGAAVP 374
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEI 313
+ G+ P A++G+ + +I + +D+ G +IGK G ++ EI
Sbjct: 375 --QPHGAHPAQPIHGGAVAGAPLTQ------------QIYIPNDMVGAIIGKGGQKINEI 420
Query: 314 RQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
RQISG+ I I+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 421 RQISGSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLESEKH 467
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 172/398 (43%), Gaps = 84/398 (21%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVT 65
+DE I +R L S+ E + +IG GG V ++R+ S AK ++ T GA +RI+T
Sbjct: 97 VDESNWIHVRALITSA----EAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAV-ERILT 151
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
VSG VD V A+ + R++ ++ +N PL
Sbjct: 152 VSGGVDA----------------------VAKAFGLIIRTINSEPLSSASTQNSKTFPL- 188
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + V G D + A
Sbjct: 189 -RLLIPHILIGSIIGKGGMRIREIQDASGARLNASDSCLPLSTERSLMVVGVADAVHIAT 247
Query: 186 YQICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQA 224
Y + L+E + G V+PY P+ P + G
Sbjct: 248 YYVATTLVEQLTERFGGPAASAYASRSGGPAGAVPGGMQVVPYTPQ-----PAFGNYGHP 302
Query: 225 --YTLHGEYA----------------VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPA 266
Y H A PVQ+ A H A G G T
Sbjct: 303 DNYRRHNNQAQRTPANPYGIPYLHGQPPVQQPAAPI--HYADPSAQPAYSGAGPHQPTVP 360
Query: 267 ALAALSGSRVKSGGKDT----GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
A +G + G G + +I + +D+ G +IGK G+++ EIRQ+SG+ I
Sbjct: 361 HHGAHTGPAAQGHGNMAAMIPGAPLTQ-QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIK 419
Query: 323 IHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I+ + S++++ I G QE +A Y++ +E +K+
Sbjct: 420 INEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKH 457
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 170/398 (42%), Gaps = 85/398 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 99 DESSWIHIRAVISS----QEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 153
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 154 SGPQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 189
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 190 RLLIPHILIGSIIGKGGVRIREIQEASGARLNASDACLPLSTERSLVVLGVADAVHIATY 249
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 250 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP--------AGGQYG 301
Query: 224 ----AYTLHGEYAVPVQEVAGKKQPH------------PL---AGLAVLGIEGIGSTSLT 264
A + + P G PH PL G A G G
Sbjct: 302 HPDSARRHYPQNNRPGPGPYGAPYPHGGPAAQAPVTQPPLHYGGGAARAPYAGAGPHQPA 361
Query: 265 P--AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
P A A G+ + + +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 362 PYGAPHAQPHGASTQPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIK 421
Query: 323 IHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I+ E S++++ I G QE +A Y++ +E +K+
Sbjct: 422 INEPQENSNERLVTITGTQECNQMALYMLYARLESEKH 459
>gi|392595587|gb|EIW84910.1| hypothetical protein CONPUDRAFT_117160 [Coniophora puteana
RWD-64-598 SS2]
Length = 378
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 138/312 (44%), Gaps = 50/312 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
+I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 57 MIHMRCL----IVTQDASIIIGKGGTHVNEIREKSGARVVVSESIPGNPERILNVSGPLD 112
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + +K +IP
Sbjct: 113 A----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIP 148
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGK G KIK+I+D SGA + + MLP STER+++V G D I A Y I +
Sbjct: 149 NSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNI 208
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
LIE ++ Y P + P YT G VP G P AG
Sbjct: 209 LIEANERLPSSGNSSYRPSSYTRRP-------PYT--GSSYVP-----GYSSSQPYAGGP 254
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
G GG + +I + +D+ GC+IGK GS++
Sbjct: 255 GG------PGGPGGPPGPPGPGGPGGPGGPNPPQQLQTQQIYIPNDLVGCIIGKGGSKIN 308
Query: 312 EIRQISGAQINI 323
EIR +S +QI I
Sbjct: 309 EIRHMSASQIKI 320
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 137 GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 196
Query: 342 AVSLAQYLI-NMCIELQKN--NTTNTSDNP 368
A+ +A Y I N+ IE + ++ N+S P
Sbjct: 197 AIHIATYYIGNILIEANERLPSSGNSSYRP 226
>gi|425778068|gb|EKV16213.1| hypothetical protein PDIP_37280 [Penicillium digitatum Pd1]
gi|425780605|gb|EKV18611.1| hypothetical protein PDIG_09250 [Penicillium digitatum PHI26]
Length = 496
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 169/396 (42%), Gaps = 96/396 (24%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + + +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 105 DESSWVHIRAVISSP----EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 159
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D + A+ + R+L + + PL
Sbjct: 160 SGPQDAA----------------------AKAFGLIIRTLNNEPLEAASTAQSKTYPL-- 195
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 196 RLLIPHILIGSIIGKGGSRIREIQEASGARLNASDACLPLSTERSLVILGVADAVHIATY 255
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---PVIL--- 219
+ + L+E + G V+PY P+ P
Sbjct: 256 YVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPETFKRH 315
Query: 220 ------SGGQAY---TLHGEYA-VPVQEV--------------AGKKQPHPLAGLAVLGI 255
+GG AY LHG+ A PV + AG QP P G
Sbjct: 316 HPHPNRAGGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPT 375
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
G G + A++ G + +I + +D+ G +IGK G+++ EIR
Sbjct: 376 PGRGPPTAPAPVGASMPGQPLTQ------------QIYIPNDMVGAIIGKGGAKINEIRH 423
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+SG+ I I+ E S++++ I G E +A Y++
Sbjct: 424 LSGSVIKINEPQESSNERLVTITGTAECNQMALYML 459
>gi|255932595|ref|XP_002557854.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582473|emb|CAP80658.1| Pc12g10310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 105/396 (26%), Positives = 169/396 (42%), Gaps = 96/396 (24%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + + +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 102 DESSWVHIRAVISSP----EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 156
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D + A+ + R+L + + PL
Sbjct: 157 SGPQDAA----------------------AKAFGLIIRTLNNEPLEAASTAQSKTYPL-- 192
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 193 RLLIPHILIGSIIGKGGSRIREIQEASGARLNASDACLPLSTERSLVILGVADAVHIATY 252
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---PVIL--- 219
+ + L+E + G V+PY P+ P
Sbjct: 253 YVAVTLVEQLSERYGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGHPDTFKRH 312
Query: 220 ------SGGQAY---TLHGEYA-VPVQEV--------------AGKKQPHPLAGLAVLGI 255
+GG AY LHG+ A PV + AG QP P G
Sbjct: 313 HPHPNRAGGGAYGVPYLHGQPAPAPVPQTPMHFPAAPQAPYGGAGPHQPAPFVGGPQQPT 372
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
G G + AA+ G + +I + +D+ G +IGK G+++ EIR
Sbjct: 373 PGRGPPTAPAPVGAAMPGQPLTQ------------QIYIPNDMVGAIIGKGGAKINEIRH 420
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+SG+ I I+ E S++++ I G E +A Y++
Sbjct: 421 LSGSVIKINEPQESSNERLVTITGTAECNQMALYML 456
>gi|453080702|gb|EMF08752.1| hypothetical protein SEPMUDRAFT_151698 [Mycosphaerella populorum
SO2202]
Length = 518
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 109/393 (27%), Positives = 171/393 (43%), Gaps = 90/393 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVTV 66
DE + +R + S+ E + +IG GG V ++RK +GAK ++ T GA +R++TV
Sbjct: 147 DESQWLHVRAIISSA----EAATVIGKGGENVSQIRKLAGAKCTVSEYTRGAV-ERVLTV 201
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS-PQP-- 123
SG VD V A+ + R+L N+ +E S PQ
Sbjct: 202 SGQVDA----------------------VAKAFGLIIRTL-----NQEPLEEPSTPQSKT 234
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L+L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D +
Sbjct: 235 YPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHI 294
Query: 184 AIYQICLVLIECTLQVVKGA---------------------VIPYEPKTMNA-------- 214
A Y + L+E G V+PY P+
Sbjct: 295 ATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVVPYVPQNTGGQVGQPDNN 354
Query: 215 ---------GPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP 265
GP + G A ++HG+ P Q VA H AG G G P
Sbjct: 355 RRHNGPPSRGPPVPYG--APSMHGQSPYPQQPVAPV---HYGAGSPRAPYAGAGPHQAHP 409
Query: 266 AALAALSGSRVKSG-------GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
AA +G G G + +I + +D+ G +IGK G+++ EIRQ+SG
Sbjct: 410 YGHAAPQPGPGHAGPPQQPVQGVGPGQPITQ-QIFIPNDMVGAIIGKGGAKINEIRQLSG 468
Query: 319 AQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ I I+ + +++++ I G QE +A Y++
Sbjct: 469 SVIKINEPQDNNNERLVTITGTQECNQMALYML 501
>gi|19075184|ref|NP_587684.1| RNA-binding protein [Schizosaccharomyces pombe 972h-]
gi|74626925|sp|O74919.1|RNC1_SCHPO RecName: Full=RNA-binding protein rnc1; AltName: Full=RNA-binding
protein that suppresses calcineurin deletion 1
gi|3702642|emb|CAA21234.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces pombe]
Length = 398
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 54/358 (15%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVT 65
+D+ T T + + ++ E +IG G V LR + K +T A P DR++T
Sbjct: 84 MDDATYATQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTK-AVPNVHDRVLT 142
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
+SG ++N V AY F+ N + + + P +
Sbjct: 143 ISGPLEN----------------------VVRAYRFIIDIFAKNSTNPDGTPSDANTPRK 180
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L+I + GS+IG+ G +IK I+D + + DMLP STER V +HG D + AI
Sbjct: 181 LRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAI 240
Query: 186 YQICLVLIECTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
++I LI+ +GA + Y P + P+ A Q+V+ P
Sbjct: 241 WEIGKCLID---DWERGAGTVFYNPVSRLTQPLPSLASTASP---------QQVSPPAAP 288
Query: 245 HPLAGLAVL-GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
+G A+ G+ + L +V I + D+ GC+I
Sbjct: 289 STTSGEAIPENFVSYGAQVFPATQMPFLQQPKVTQN------------ISIPADMVGCII 336
Query: 304 GKAGSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
G+ GS++ EIR+ SG++I+I E+ ++MF I G E A +L+ +E++K+
Sbjct: 337 GRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLLYQQLEMEKD 394
>gi|350592221|ref|XP_003359061.2| PREDICTED: poly(rC)-binding protein 3-like [Sus scrofa]
Length = 347
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 117/254 (46%), Gaps = 80/254 (31%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 37 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 92
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
IVT++G D + A+ + E++
Sbjct: 93 IVTITG----------------------PTDAIFKAFAMIAYKFEEF------------- 117
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
+ G +++ D+ LP STER VT+ G PD I
Sbjct: 118 ----------------LQSTGAQVQVAGDM-----------LPNSTERAVTISGTPDAII 150
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP-------V 235
Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P +
Sbjct: 151 QCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQLTKL 206
Query: 236 QEVAGKKQPHPLAG 249
++A ++ P P G
Sbjct: 207 HQLAMQQTPFPPLG 220
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 164/369 (44%), Gaps = 80/369 (21%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 46 SMLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 101
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + +SL + ++N P+ +
Sbjct: 102 QGT----------------------AKAYGMVAKSLLEGAPQVGMGGIIQNNGTHPV--R 137
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 138 LLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 197
Query: 188 ICLVLIECTLQVVKGAVIPYEPKT--------MNA---GPVILSGGQAYTLHGEYA-VPV 235
I LI+ Q G V+ Y P MN+ GP GG++Y G A
Sbjct: 198 IGKCLID-DWQRGTGTVL-YNPAVRANVGGGQMNSSFLGPNPNYGGRSYNRTGNGADFSD 255
Query: 236 QEVAGKKQPH----PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
Q +G + H P G+ ++ + G++
Sbjct: 256 QPSSGYNRRHNSDAPNRGIPLV---------------------------TEDGEEVQTQN 288
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+ GS++ EIR+ SGA+I+I + E+ ++MF I G +A A YL
Sbjct: 289 ISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKASHDETGERMFTIMGSAQANEKALYL 348
Query: 350 INMCIELQK 358
+ +E +K
Sbjct: 349 LYENLEAEK 357
>gi|313229517|emb|CBY18332.1| unnamed protein product [Oikopleura dioica]
Length = 488
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 177/397 (44%), Gaps = 75/397 (18%)
Query: 2 DGNGDGKIDEDTL-ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP 60
D + ++ +DT+ +T+R LF N++ LIG G + ++R+ESG ++ I
Sbjct: 9 DNSQQDELGDDTICVTIRLLFKG----NQVGTLIGRKGSKIMQIREESGCEVKIKGNEKD 64
Query: 61 -DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
+RIV+VSGS + + + G F+ L D R
Sbjct: 65 IERIVSVSGSPAGVTRAIGKVG------------------EFVEADLNDGLTGRT----- 101
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ P+ L +++P CGS+IGKGG +IK+IR+ +G NV++A+++LP STE+++T++G P
Sbjct: 102 TKIPVTLHMIVPTGQCGSIIGKGGFRIKEIREKTGCNVKIANELLPASTEKLITLYGEPR 161
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I Q + IC V+IE + + PY P + PV G +Y P A
Sbjct: 162 VIQQCVGSICQVMIE---EGQERKCTPYTPASYGPSPVFGMEGMPRNA-SQYPPPPAGNA 217
Query: 240 GKKQPHPLAGLA------------------------------VLG--IEGIGSTSLT--- 264
+ P+P +G + G G G++S
Sbjct: 218 PPQYPYPHSGHSGAPPSAPPTQPGYPPNWAPGHPPMPNPPAPAYGQVYPGYGASSYPNPS 277
Query: 265 -PAAL---AALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
PA + L +VK K + +E + T G VIG+ GSR+ E+R +S
Sbjct: 278 DPAFILRDTNLDHFKVKLATKILSEGVLEVHVDKT--CMGAVIGRGGSRIGEVRMLSTHD 335
Query: 321 INIH-TGTESHKKMFHIQGCQEAVSLAQYLINMCIEL 356
I IH +S + I G + + A L+++C+ +
Sbjct: 336 IKIHEVDGDSTFRRITISGDKNHIDKAVLLLHVCVNV 372
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 137/313 (43%), Gaps = 78/313 (24%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++S A++ +++ P+RI+ VSG +D
Sbjct: 120 IHMRCL----IVTQDASIIIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGPLDA 175
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D ++ + + + +K +IP
Sbjct: 176 ----------------------VSKAFGLIVRRINDEPFDKPSVPGS--RAVTIKFMIPN 211
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 212 SRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNIL 271
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
IE ++ P N+ Y P + ++P P V
Sbjct: 272 IEANERL---------PSYNNS---------------SYYRP---SSNSRRPPPNGSSYV 304
Query: 253 LGIEGI--GSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
G GS+ P L +I + +D+ GC+IGK GS++
Sbjct: 305 PGYSNTYPGSSHGPPQQLQT-------------------QQIYIPNDLVGCIIGKGGSKI 345
Query: 311 LEIRQISGAQINI 323
EIR +S + I I
Sbjct: 346 NEIRHMSASNIKI 358
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 48/219 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ ++ SGA+++ ++G P +R+++VSG D
Sbjct: 203 VTIKFMIPNS----RMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 258
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS----------- 120
+ T Y G+ L + +YN + R S
Sbjct: 259 ---AIHIATYYIGNILI--EANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPG 313
Query: 121 -----PQPLQLK-LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST------ 168
PQ LQ + + IP G +IGKGG KI +IR +S +N+++ M P +
Sbjct: 314 SSHGPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKI---MEPGAVGVGMNG 370
Query: 169 ---------ERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
ER+V + G P I A+ Q+ +E Q
Sbjct: 371 APAPAGGEGERLVVITGQPANIQMAV-QLLYHRLEQEKQ 408
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK G+++ EI+ SGA++N G S +++ + G +
Sbjct: 199 GSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 258
Query: 342 AVSLAQYLI-NMCIE 355
A+ +A Y I N+ IE
Sbjct: 259 AIHIATYYIGNILIE 273
>gi|310792993|gb|EFQ28454.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 384
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 173/391 (44%), Gaps = 60/391 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG + DE+ +T+R + S E +IG G V LR E+G K ++
Sbjct: 31 DGEPAPRTDEEYAMAQLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + V AY + ++L + +
Sbjct: 87 QGVHDRVLTITGGCQS----------------------VAEAYAIVAKALLEGAPSMGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++N P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 125 GVVQNNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIE----CTLQVVKGAVIPYEPKTMNAG-----PVILSGGQA 224
V G P+ I AI++IC L++ T V+ V+ +P T + P SGG
Sbjct: 183 VQGTPEGIKGAIWEICKCLVDDWQRGTGTVLYNPVVRTQPGTTSTAGSGSTPNYSSGGGR 242
Query: 225 YTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT- 283
+ +Y+ P G A + + S S S G T
Sbjct: 243 SS---DYSAPRVMRTGNG-----ADFSASNTNNNNNNGGGGRPYGRRSDSDAASRGPPTH 294
Query: 284 ---GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQG 338
G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 295 DENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDDTGERMFTIMG 354
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNPE 369
+A A +L+ +E +K T+ +PE
Sbjct: 355 TAKANESALFLLYENLEAEKMR-RQTATSPE 384
>gi|350631260|gb|EHA19631.1| hypothetical protein ASPNIDRAFT_52961 [Aspergillus niger ATCC 1015]
Length = 462
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 168/402 (41%), Gaps = 108/402 (26%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 103 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D + A+ + R+L + ++ PL
Sbjct: 158 SGPQDAA----------------------AKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 193
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + + G D + A Y
Sbjct: 194 RLLIPHILIGSIIGKGGSRIREIQDASGARLNASDACLPLSTERSLVILGVADAVHIATY 253
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ + L+E + G V+PY P+
Sbjct: 254 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAG------------ 301
Query: 226 TLHGEYAVPVQEVAGKKQPHP----LAGLAVLGIEG-------------IGSTSLTPAAL 268
G+Y P + + PHP G V ++G G+T TP A
Sbjct: 302 ---GQYGHP--DTFKRHHPHPNRGAAGGYGVPYLQGPAAQTPVAQPSMPYGATPHTPYAG 356
Query: 269 AALSGSRVKS-------------------GGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
A GG G + +I + +D+ G +IGK G++
Sbjct: 357 AGPHQPAPYGAPQAAAAQARGGPTPAAPVGGVMPGQPLTQ-QIYIPNDMVGAIIGKGGAK 415
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ EIR +SG+ I I+ E S++++ I G QE +A Y++
Sbjct: 416 INEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML 457
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 167/384 (43%), Gaps = 82/384 (21%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K +ED + +T+R + V+ E +IG G V LR+E+G K ++ DR
Sbjct: 36 KTEEDYAQSQLTLRAI----VSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDR 91
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G + + AY+ + + L + ++N
Sbjct: 92 VLTVTGPLSG----------------------IAKAYSLVAKGLLEGAPQVGMGGVVQNN 129
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ +L+I G++IG+ G KIK I+D+SG + +MLP STERIV V G P+
Sbjct: 130 GTHPI--RLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPE 187
Query: 180 TISQAIYQICLVLIE--------------CTLQVVKGAVIPYEPKTMNAGPVILSGGQAY 225
I +A+++I L++ +QV G + P + AG + GG++Y
Sbjct: 188 GIDKAVWEIGKCLVDDWQRGTGTVLYNPAVRVQVGSGPLPPAVGGGLPAGNNYIGGGRSY 247
Query: 226 TLHGEYAVPVQEVAGKKQPH--PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT 283
G A E G + + P G+ ++ +
Sbjct: 248 NRTGNGA-DFSESRGYTRGNDLPRGGIPMV---------------------------TED 279
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G++ I + D+ GC+IG+ GS++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 280 GEEVQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAS 339
Query: 342 AVSLAQYLINMCIELQKNNTTNTS 365
A A YL+ +E +K S
Sbjct: 340 ANERALYLLYENLEAEKGRRQQVS 363
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 160/363 (44%), Gaps = 59/363 (16%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVS 67
E+ + + V E +IG G V LR ++G + ++ P DR++TV+
Sbjct: 33 EEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK-VVPGVHDRVLTVT 91
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--SPQPLQ 125
G++ TG + AY + SL M SP
Sbjct: 92 GAL---------TG-------------IADAYGLVADSLVKGAPQMG-MGGVVGSPNTHP 128
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +++
Sbjct: 129 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQKSV 188
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
++I LI+ Q G V+ Y P V + GG ++G A PV G +
Sbjct: 189 WEIGKCLIDDE-QRGYGTVL-YSPA------VRVQGGAPPAING--ASPVGFGGGAPRSF 238
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT--------GDDFVETEIVLTDD 297
G G ++S P ++GG D G+D I + D
Sbjct: 239 ARTGNGADFTSGAPASSYPPR----------RNGGSDAGPPPVVEDGEDIQTQNISIPAD 288
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIE 355
+ GC+IG+ GS++ EIR+ SGA+I+I ES ++MF I G A A YL+ +E
Sbjct: 289 MVGCIIGRGGSKISEIRKSSGARISIAKAPHDESGERMFTITGGPSANEKALYLLYENLE 348
Query: 356 LQK 358
+K
Sbjct: 349 AEK 351
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 170/404 (42%), Gaps = 84/404 (20%)
Query: 3 GNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GAC 59
G G DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA
Sbjct: 121 GQSHGTQDETGFIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAV 176
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
+RI+TVSG D V A+ + R+L + ++
Sbjct: 177 -ERILTVSGPQDA----------------------VAKAFGLIIRTLNNEPLDSPSTAQS 213
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
PL +L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D
Sbjct: 214 KTYPL--RLLIPHILIGSIIGKSGVRIREIQEHSGARLNASDSCLPLSTERSLVILGVAD 271
Query: 180 TISQAIYQICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVI 218
+ A Y + L+E + G V+PY P+
Sbjct: 272 AVHIATYYVAATLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP------- 324
Query: 219 LSGGQ-----AYTLHGE---------YAVPVQEVAGK-----KQPHPLAGLAVLGIEGIG 259
+GGQ ++ H Y VP G +QP G G G
Sbjct: 325 -AGGQYGHPDSFKRHHPQANRAMSTGYGVPYMHGPGPSPHGMQQPIHYNASPRQGYTGAG 383
Query: 260 STSLTPAALAALS---GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
P G+ + G + +I + +D+ G +IGK G+++ EIR +
Sbjct: 384 PHQPAPYGAPQPPHSHGTPAQPMGAPVAGGPLTQQIFIPNDMVGAIIGKGGAKINEIRHL 443
Query: 317 SGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
SG+ I I+ + S++++ I G QE +A Y++ +E +K+
Sbjct: 444 SGSVIKINEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKH 487
>gi|302692864|ref|XP_003036111.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
gi|300109807|gb|EFJ01209.1| hypothetical protein SCHCODRAFT_74754 [Schizophyllum commune H4-8]
Length = 282
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 136/313 (43%), Gaps = 91/313 (29%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
+I MRCL + + S +IG G V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 1 MIHMRCL----IVTQDASIIIGRAGAHVNEIREKSGARVVVSESIPGNPERILNVSGPLD 56
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + +K +IP
Sbjct: 57 A----------------------VSKAFGLIVRRINDEPFDVPSLPGS--RAVTIKFMIP 92
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y + +
Sbjct: 93 NSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNI 152
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
LIE ++ A Y P P+ P+P
Sbjct: 153 LIEAQERMPSTANASYRPGNPTRRPI-----------------------TNAPYP----- 184
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET-EIVLTDDIAGCVIGKAGSRL 310
GST +V+T +I + +D+ GC+IGK GS++
Sbjct: 185 -------GST-------------------------YVQTQQIYIPNDLVGCIIGKGGSKI 212
Query: 311 LEIRQISGAQINI 323
EIR +S +QI I
Sbjct: 213 NEIRHMSASQIKI 225
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 30/189 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ ++ SGA+++ ++G P +R+++V+G D
Sbjct: 85 VTIKFMIPNS----RMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-----LQL 126
+ T Y G+ L + + + + + N S + R + N +P P
Sbjct: 141 ---AIHIATYYVGNIL-IEAQERMPSTANA---SYRPGNPTRRPITN-APYPGSTYVQTQ 192
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ------VASDMLPMST----ERIVTVHG 176
++ IP G +IGKGG KI +IR +S + ++ VA+ M + ER+V + G
Sbjct: 193 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVATGMPAGAAGSEGERLVVITG 252
Query: 177 NPDTISQAI 185
P I A+
Sbjct: 253 QPANIQMAV 261
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 81 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 342 AVSLAQYLI-NMCIELQKN--NTTNTSDNP 368
A+ +A Y + N+ IE Q+ +T N S P
Sbjct: 141 AIHIATYYVGNILIEAQERMPSTANASYRP 170
>gi|242764737|ref|XP_002340835.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
gi|218724031|gb|EED23448.1| KH domain RNA binding protein [Talaromyces stipitatus ATCC 10500]
Length = 461
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 105/398 (26%), Positives = 169/398 (42%), Gaps = 85/398 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + IG GG V ++R+ SG+K +++D GA +RI+TV
Sbjct: 99 DESSWIHIRAVISS----QEAATCIGKGGENVSKIRQLSGSKCTVSDYSRGAV-ERILTV 153
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 154 SGPQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 189
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 190 RLLIPHILIGSIIGKGGVRIREIQEASGARLNASDACLPLSTERSLVVLGVADAVHIATY 249
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 250 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP--------AGGQYG 301
Query: 224 ---AYTLH---------GEYAVP-------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
+ H G Y P Q + H G A G G
Sbjct: 302 HPDSVRRHYPQNNRPGPGPYGAPYAHGGPAAQAPVAQPPLHYGGGAARAPYAGAGPHQPA 361
Query: 265 P--AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
P A A G+ + + +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 362 PYGAPHAQPHGAGAQPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIK 421
Query: 323 IHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I+ E S++++ I G QE +A Y++ +E +K+
Sbjct: 422 INEPQENSNERLVTITGTQECNQMALYMLYARLESEKH 459
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 173/401 (43%), Gaps = 104/401 (25%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTVS 67
E+ +I S V + + +IG GG V +R S A+++I+D GA +RI+TV
Sbjct: 71 EEGMIAGNISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAA-ERILTVV 129
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-- 125
G V V AY + + I N + + P+Q
Sbjct: 130 GPVSA----------------------VAKAYALVAEKI----IEENTLAEDNKGPIQQD 163
Query: 126 --LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+K++I A GS+IGK G I+ I++ SGA V + LP+STER+VT+HG PD I Q
Sbjct: 164 VTIKILILANRMGSIIGKSGSVIRSIQETSGAKVSAQEEPLPLSTERVVTIHGTPDAIEQ 223
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAY------------- 225
A+ +I +L++ G + Y+P A P S G + Y
Sbjct: 224 AVKKIGDILVDQPNH--HGNYMLYKP-IAGAAPHTSSSNHGNGHRNYRRSNDNNNAASHA 280
Query: 226 ---------------------TLHGEYAVPVQE---VAGKKQPHPL---AGLAVLGIEGI 258
+++G Y P G++ +PL GL+ L + G
Sbjct: 281 MPTAAAAAMMGYSGMLPMGNMSMNGFYYPPTNYPGGSGGRQGDYPLPMMPGLSNLSMMG- 339
Query: 259 GSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
G +++ PA + ++ E+V GC+IGK G ++ EIRQ SG
Sbjct: 340 GLSNMMPATQSQ--------------QIYIPNEMV------GCIIGKGGMKINEIRQTSG 379
Query: 319 AQINI-HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ I I T+SH+++ I G E+ +A YL+ +E ++
Sbjct: 380 SHIKIADPSTDSHERLITITGTPESNQMALYLLYSRLEAEQ 420
>gi|392597310|gb|EIW86632.1| cytoplasmic protein [Coniophora puteana RWD-64-598 SS2]
Length = 328
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 162/351 (46%), Gaps = 66/351 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
DTL T+R L V+ E +IG G V LR ++G K ++ +R++TV GS
Sbjct: 24 DTL-TLRAL----VSTKEAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVGGS 78
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
V+ V AY + L + + M + SP ++L+
Sbjct: 79 VEA----------------------VAKAYTLIIAQLVESNPTSVSMSSPSPH-TSIRLL 115
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D++G + A DMLP STERIV V G P++I +AI +I
Sbjct: 116 ISHNLMGTIIGRNGLKIKAIQDVTGVRMVAAKDMLPQSTERIVEVQGAPESIGRAIEEIG 175
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
L+E + + G V+ Y P T V + +G K+ + AG
Sbjct: 176 KCLLEDWERGL-GTVL-YHPGT-----------------------VDDRSGSKRTNGYAG 210
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
G S A LS S +S + I + D+ GC+IG++G++
Sbjct: 211 ---------GRRSNGDTAREQLSPSSPQSPTSSPQTNLRTQNISIPSDMVGCIIGRSGTK 261
Query: 310 LLEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 262 ITEIRRLSGSKISIAKVPHDETGERMFTIIGTPEANEKALFLLYNQLESEK 312
>gi|170578788|ref|XP_001894545.1| KH domain containing protein [Brugia malayi]
gi|158598797|gb|EDP36609.1| KH domain containing protein [Brugia malayi]
Length = 377
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 141/322 (43%), Gaps = 74/322 (22%)
Query: 50 AKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY 109
A +++ D P+RI T+ +V+N E + +D+ R+L+
Sbjct: 102 ANVTVPDSQTPERIATIVATVENVLAIVTEI--------IPKLDD---------RTLQSR 144
Query: 110 HINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE 169
+ NR P++L++++ ++H G++IG+ G KIK++++ G ++V + P STE
Sbjct: 145 ESDLNR-------PIELRVLVHSSHAGAVIGRQGSKIKEMKEELGVQMKVFAQCPPQSTE 197
Query: 170 RIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYE----------------PKTMN 213
R+V++ G PD I + I +L E +KG PYE P
Sbjct: 198 RVVSIKGAPDKILACVNHIMNMLKEIP---IKGVTKPYESMFYDPSYSSEYGGYPPDRNY 254
Query: 214 AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSG 273
GP+I G A T +G Y Q G + P L+ AL G
Sbjct: 255 RGPMI-RGPMAVTSYGNYGRSFQRQIGGRGP------------------LSAVALPPYMG 295
Query: 274 SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM 333
T++ + +++ G +IGK G R+ +R+ SGAQI + ES +++
Sbjct: 296 PEES------------TQVTIPNELGGTIIGKGGERINRVREESGAQIVVGPQQESGERI 343
Query: 334 FHIQGCQEAVSLAQYLINMCIE 355
I G A+ AQYL+ C+
Sbjct: 344 ITITGTSTAIQTAQYLLQQCVR 365
>gi|159129031|gb|EDP54145.1| KH domain RNA binding protein [Aspergillus fumigatus A1163]
Length = 464
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 169/402 (42%), Gaps = 110/402 (27%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 107 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 161
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ PL
Sbjct: 162 SGPQDA----------------------VAKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 197
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+S+ER + + G D++ A Y
Sbjct: 198 RLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDSCLPLSSERSLVILGVADSVHIATY 257
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ + L+E + G V+PY P+
Sbjct: 258 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAG------------ 305
Query: 226 TLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGI--------------------------- 258
G+Y P E + PHP A G G+
Sbjct: 306 ---GQYGHP--EHFKRHHPHP--NRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPY 358
Query: 259 -GSTSLTPAALAALSGSRVKS--------GGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
G+ PA A ++ + GG G + +I + +D+ G +IGK G++
Sbjct: 359 AGAGPHQPAPYGAPQPAQARGAPTPATPVGGVMPGQPLTQ-QIYIPNDMVGAIIGKGGAK 417
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ EIR +SG+ I I+ E S++++ I G QE +A Y++
Sbjct: 418 INEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML 459
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 46/353 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R + S E +IG GG V LR E+G K ++ DR++T++G D
Sbjct: 47 LTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDA 102
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLKLV 129
+ AY + R+L + +++ P+ KL+
Sbjct: 103 ----------------------ISRAYAIVARALLEGAPAMGMGGVVQSNGTHPI--KLL 138
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +AI++IC
Sbjct: 139 ISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEIC 198
Query: 190 LVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
L++ Q G V+ Y P +T + SGG + + + G +
Sbjct: 199 KCLVD-DWQRGTGTVL-YNPVVRTQPSSGGNTSGGAGFNQGSGRS----DYGGSPRVMRT 252
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
A + + AAL G + G++ I + D+ GC+IG+AG
Sbjct: 253 GNGADFSNGSSRPYNRRSDSDAALRGPPTHD---ENGEEIQTQNISIPADMVGCIIGRAG 309
Query: 308 SRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
S++ EIR+ SGA+I+I E+ ++MF I G +A A +L+ +E +K
Sbjct: 310 SKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEK 362
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 76/361 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MR L +S + S +IG G + +R+ S A+++I++ + P+RI+TVSG++D
Sbjct: 85 IVMRALIITS----DASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALDA 140
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D ++ + + ++ +IP
Sbjct: 141 ----------------------VSKAFGLLVRRINDEPFDQPSLPGS--RAASIRFIIPN 176
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ G++IG+ G KIK+I++ SGA + MLP STERI+++ G D + A+Y + L
Sbjct: 177 SRMGAIIGRQGSKIKEIQEASGARLHAGETMLPGSTERILSITGVADALHIAVYYVGATL 236
Query: 193 IECTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
+E +G+ +PY P +N +A T + G P A +
Sbjct: 237 LE---HPDRGSNNLPYRPAAVN---------RALT---------PSLVGSPLNSPSASML 275
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
L S + +P ALA+ V + G T +I + +D+ GC+IGK G ++
Sbjct: 276 AL------SATNSPKALAS-----VLTPGLQT------QQIFIPNDLVGCIIGKGGQKIN 318
Query: 312 EIRQISGAQINIH-------TGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNT 364
EIRQ+S + I I G +++ I G + +A L+ +E +K ++
Sbjct: 319 EIRQLSASHIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQEKMRLAHS 378
Query: 365 S 365
S
Sbjct: 379 S 379
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
+P P+ ++ +I + +IGK G I +IR+LS A + + S+ +P + ERI+TV G
Sbjct: 80 STPGPIVMRALIITSDASVIIGKQGRHINEIRELSNARLNI-SESIPSNPERILTVSGAL 138
Query: 179 DTISQAI 185
D +S+A
Sbjct: 139 DAVSKAF 145
>gi|119480179|ref|XP_001260118.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
gi|119408272|gb|EAW18221.1| KH domain RNA binding protein [Neosartorya fischeri NRRL 181]
Length = 464
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 169/402 (42%), Gaps = 110/402 (27%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 107 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 161
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ PL
Sbjct: 162 SGPQDA----------------------VAKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 197
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+S+ER + + G D++ A Y
Sbjct: 198 RLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDSCLPLSSERSLVILGVADSVHIATY 257
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ + L+E + G V+PY P+
Sbjct: 258 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAG------------ 305
Query: 226 TLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGI--------------------------- 258
G+Y P E + PHP A G G+
Sbjct: 306 ---GQYGHP--EHFKRHHPHP--NRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPY 358
Query: 259 -GSTSLTPAALAALSGSRVKS--------GGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
G+ PA A ++ + GG G + +I + +D+ G +IGK G++
Sbjct: 359 AGAGPHQPAPYGAPQPAQARGAPTPATPVGGVMPGQPLTQ-QIYIPNDMVGAIIGKGGAK 417
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ EIR +SG+ I I+ E S++++ I G QE +A Y++
Sbjct: 418 INEIRHLSGSVIKINEPQENSNERLVTITGTQECNQMALYML 459
>gi|70989551|ref|XP_749625.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
gi|66847256|gb|EAL87587.1| KH domain RNA binding protein [Aspergillus fumigatus Af293]
Length = 464
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 170/393 (43%), Gaps = 92/393 (23%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 107 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 161
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ PL
Sbjct: 162 SGPQDA----------------------VAKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 197
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+S+ER + + G D++ A Y
Sbjct: 198 RLLIPHLLIGSIIGKGGSRIREIQEASGARLNASDSCLPLSSERSLVILGVADSVHIATY 257
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQA- 224
+ + L+E + G V+PY P+ +GGQ
Sbjct: 258 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQP--------AGGQYG 309
Query: 225 ----YTLH---------GEYAVPV------------QEVAGKKQPH-PLAGLAVLGIEGI 258
+ H G Y VP + PH P AG
Sbjct: 310 HPEHFKRHHHHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGAAPHAPYAGAGPHQPAPY 369
Query: 259 GSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
G+ A A + V GG G + +I + +D+ G +IGK G+++ EIR +SG
Sbjct: 370 GAPQPAQARGAPTPATPV--GGVMPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRHLSG 426
Query: 319 AQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ I I+ E S++++ I G QE +A Y++
Sbjct: 427 SVIKINEPQENSNERLVTITGTQECNQMALYML 459
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 175/405 (43%), Gaps = 96/405 (23%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 121 DETAWIHIRAVISSP----EAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAV-ERILTV 175
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + ++ + PL
Sbjct: 176 SGIVDA----------------------VAKAFGLIIRTLNNEPLSDASSAHSKTYPL-- 211
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+S+ER + V G D + A Y
Sbjct: 212 RLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSSERSLVVMGVADAVHIATY 271
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTM------------- 212
+ L+E G V+PY P+
Sbjct: 272 YVGSTLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNFGNRENYGRR 331
Query: 213 ---NAGPV----ILSGGQAYTLHGEY----AVPVQEVA------GKKQPHPLAGLAVLGI 255
AGPV + Q Y H + AVPV A QP P G A +
Sbjct: 332 PDPRAGPVPQGAAVPYAQHYNPHAAHQPTPAVPVHYGAQGGAYGAHVQP-PHVGHAGPQV 390
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
G + + G++ + +I + +D+ G +IGK G+++ EIRQ
Sbjct: 391 HGAPHQQPMHSQMPGPGGAQ-----------SLTQQIYIPNDMVGAIIGKGGTKINEIRQ 439
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
ISG+ I I+ + S++++ I G +E +A Y++ +E +K+
Sbjct: 440 ISGSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLESEKH 484
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 178/405 (43%), Gaps = 85/405 (20%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACP 60
N + ++DE + +R +S E + +IG GG V ++R+ SGAK +++D GA
Sbjct: 118 NSNQQVDETNWLHVRACIGTS----EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAV- 172
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMEN 118
+RI+TVSG VD V A+ + R+L ED
Sbjct: 173 ERILTVSGQVDA----------------------VSKAFGLIVRTLNQEDLETPSTSTSK 210
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P ++L+IP GS+IGK G +I++I++ S A + + +LP S ER + V G
Sbjct: 211 AYP----MRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPNSGERSLIVLGVA 266
Query: 179 DTISQAIYQICLVLIECTLQVVKG-AVIPYEPKTMNAGPVILSGG--QAYTLH---GEYA 232
D + A+Y + L+E + G A Y ++ A V+ G Q Y G+Y+
Sbjct: 267 DAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYS 326
Query: 233 VPV----QEVAGKKQPHPLAGLAVLGIEG-------IGSTSLTPAALAALSGSRVKSGGK 281
P QE A + H G + G G ++ A S SR GG
Sbjct: 327 HPQNFRRQEPAQRTPAH--GGYGAPHMHGQPPQQSPYGHPNM---PYGAASPSRGPYGGP 381
Query: 282 DTGDDF--------------------------VETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
+ + +I + +D+ G +IGK G+++ EIRQ
Sbjct: 382 AAPTPYGAHPAAAPVAHGAAPHAPVGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQ 441
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
+SG+ I I+ T+ S++++ I G QE +A Y++ +E +K+
Sbjct: 442 LSGSVIKINEPTDNSNERLVTITGTQECNQMALYMLYSRLESEKH 486
>gi|452837822|gb|EME39763.1| hypothetical protein DOTSEDRAFT_74610 [Dothistroma septosporum
NZE10]
Length = 490
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 173/401 (43%), Gaps = 108/401 (26%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVTV 66
DE + + +R + S+ E + +IG GG V ++R+ +GAK ++ T GA +RI+TV
Sbjct: 121 DESSWLHVRAIISSA----EAATVIGKGGENVTQIRRMAGAKCTVSEYTRGAV-ERILTV 175
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L +++ PL
Sbjct: 176 SGLVDA----------------------VAKAFGLIIRTLNQEPLDQPSTPQSKTYPL-- 211
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 212 RLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIATY 271
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---------- 215
+ L+E + G V+PY P+ +AG
Sbjct: 272 YVGSTLVEQLTERFGGPAASNYAGRHGGPQGVVPGGMQVVPYVPQ--HAGGQMGHPDYNR 329
Query: 216 ----------PVILSGGQAYTLHGEYAVPVQEV---------------AGKKQPHPLAGL 250
P GGQ Y + G+ +P Q+ AG +QP P
Sbjct: 330 NKQHAQPQRTPAQPYGGQQY-MQGQTPLPPQQAPMGYGAGSPRAPYVGAGPQQPQPYGHA 388
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
A P A A ++ G G + +I + +D+ G +IGK G+++
Sbjct: 389 A-------------PQAHAGPPQQPMQ--GMVPGQPITQ-QIFIPNDMVGAIIGKGGAKI 432
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
EIRQ+SG+ I I+ + +++++ I G QE +A Y++
Sbjct: 433 NEIRQLSGSVIKINEPQDNNNERLVTITGTQECNQMALYML 473
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 138/313 (44%), Gaps = 61/313 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG G V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 63 IHMRCL----IVTQDASIIIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVSGPLDA 118
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D ++ + + + +K +IP
Sbjct: 119 ----------------------VSKAFGLIVRRINDEPFDKPSVPGS--RAVTIKFMIPN 154
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I++ SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 155 SRMGSVIGKGGTKIKEIQEASGARLNASETMLPGSTERLLSVSGVADAIHIATYYIGNIL 214
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
IE ++ Y P + A A P G+ P +G
Sbjct: 215 IEANERMPTTNNSSYRPSSYQA---------------SSAPPSSTPRGRP---PYSG--- 253
Query: 253 LGIEGIGSTSLTPAALA--ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
+S P + + + +I + +D+ GC+IGK G+++
Sbjct: 254 --------SSYVPGGYGQNPYAPAAPAAPAPGPPSQLQTQQIYIPNDLVGCIIGKGGAKI 305
Query: 311 LEIRQISGAQINI 323
EIR +S +QI I
Sbjct: 306 NEIRHMSASQIKI 318
>gi|358379880|gb|EHK17559.1| hypothetical protein TRIVIDRAFT_231881 [Trichoderma virens Gv29-8]
Length = 477
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 172/410 (41%), Gaps = 102/410 (24%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 111 DESSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 165
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + +N + PL
Sbjct: 166 SGIVDA----------------------VAKAFGLIIRTLNNEPLNEASTASSKTYPL-- 201
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 202 RLLIPHILIGSIIGKGGSRIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 261
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ L+E + G V+PY P+ P G+A
Sbjct: 262 YVGSTLLEQLNERFGGPAASAYATRSGAPVGSIPGGMQVVPYSPQ-----PASGHYGRAE 316
Query: 226 TL-------------------------HGEYAVPVQ-------EVAGKKQPHPLAGLAVL 253
HG A+P+Q G PH +A
Sbjct: 317 NYGRHQERRPHHMPPAPYPQPYPHGAPHGAPAIPMQYGAGQPAAAYGAAAPHVQPHMA-- 374
Query: 254 GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEI 313
P A G + +G TG + +I + +D+ G +IGK G ++ EI
Sbjct: 375 -------PHTGPQPHGAPQGQPMHAGMPGTGP--ITQQIYIPNDMVGAIIGKGGQKINEI 425
Query: 314 RQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTT 362
RQ+SG+ I I+ + S++++ I G +E +A Y++ + +N +T
Sbjct: 426 RQMSGSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLGETQNRST 475
>gi|429858530|gb|ELA33346.1| kh domain rna-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 377
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/356 (27%), Positives = 157/356 (44%), Gaps = 49/356 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R + S E +IG G V LR E+G K ++ DR++T++G +
Sbjct: 49 LTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGEIQA 104
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLKLV 129
+ AY + ++L + ++N P+ KL+
Sbjct: 105 ----------------------ISKAYAIVAQALLEGAPAMGMGGVVQNNGTHPI--KLL 140
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D+SG + +MLP STERIV V G PD I A+++IC
Sbjct: 141 ISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVEVQGTPDGIKAAVWEIC 200
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL-- 247
L++ Q G V+ Y P N P S + A P +
Sbjct: 201 KCLVD-DWQRGTGTVL-YNPVVRNQ-PGTTSSTIGGGSGSYSSTGGGRSAEYSSPRVMRT 257
Query: 248 ---AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
A + G S + AA SR + G++ I + D+ GC+IG
Sbjct: 258 GNGADFSNGATRPYGRRSDSDAA------SRGPPTHDENGEEIQTQNISIPADMVGCIIG 311
Query: 305 KAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+AGS++ EIR+ SGA+I+I E+ ++MF I G +A A +L+ +E +K
Sbjct: 312 RAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALFLLYENLEAEK 367
>gi|396482778|ref|XP_003841545.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
gi|312218120|emb|CBX98066.1| similar to KH domain RNA binding protein [Leptosphaeria maculans
JN3]
Length = 488
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 174/401 (43%), Gaps = 84/401 (20%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIV 64
++DE + +R +S E + +IG GG V ++R+ SGAK +++D GA +RI+
Sbjct: 121 QVDETNWLHVRACIGTS----EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAV-ERIL 175
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMENCSPQ 122
TVSG VD V A+ + R+L ED P
Sbjct: 176 TVSGQVDA----------------------VSKAFGLIVRTLNQEDLETPSTSTSKAYP- 212
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
++L+IP GS+IGK G +I++I++ S A + + +LP S ER + V G D +
Sbjct: 213 ---MRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPNSGERSLVVLGVADAVH 269
Query: 183 QAIYQICLVLIECTLQVVKG-AVIPYE----------PKTMNAGPVI--LSGGQAYT--- 226
A+Y + L+E + G A Y P M+ P + +GGQ Y+
Sbjct: 270 IAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGGQ-YSHPQ 328
Query: 227 -----------LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT----PAALAAL 271
HG Y QP P + G GS PAA +
Sbjct: 329 NFRREPTQRTPAHGGYGAAHMHGGQPPQPSPYGHPNMP--YGAGSPGRAPYGGPAAPTSY 386
Query: 272 SGSRVKSG------------GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
G + G G + +I + +D+ G +IGK G+++ EIRQ+SG+
Sbjct: 387 GGHHAAAPVAHGSTPMQPAVGSMPGQPLTQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGS 445
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I I+ T+ S++++ I G QE +A Y++ +E +K+
Sbjct: 446 MIKINEPTDNSNERLVTITGTQECNQMALYMLYSRLESEKH 486
>gi|430813652|emb|CCJ29027.1| unnamed protein product [Pneumocystis jirovecii]
Length = 383
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/377 (27%), Positives = 167/377 (44%), Gaps = 74/377 (19%)
Query: 1 MDGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
DG G G+ + + +T+R L V+ E +IG G V LR +G K ++
Sbjct: 55 FDGEGRGEEYDGYGGSQVTLRAL----VSTKEAGIIIGRQGKNVAELRGANGIKAGVSK- 109
Query: 58 ACP---DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR- 113
P DR++T+SGS+D V AY + ++ D I
Sbjct: 110 VVPNIHDRVLTISGSLDG----------------------VSKAYAAIAQAFIDNPIGHS 147
Query: 114 -NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIV 172
N + S ++L+I G++IG+ G KIK I+DLSGA + ++LP STERIV
Sbjct: 148 TNHASSSSEPQSSIRLLISHNMMGTIIGRQGLKIKHIQDLSGARMIAFKEILPQSTERIV 207
Query: 173 TVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTM--------NAGPVILSGGQA 224
V G +I AI++I LI+ + + + Y P + G ILSG Q
Sbjct: 208 EVQGVVSSIQTAIWEIGKCLIDDWERGI--GTVFYNPSLRLSSTLVPGHQGNSILSGAQ- 264
Query: 225 YTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
P + ++Q S+ + + L + S + +
Sbjct: 265 ---------PGHYLQYQRQ----------------SSQMNYSRLGNMP-SHFQEPLDTSN 298
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEA 342
D I + D+ GC+IG+ GS++ EIR+ISG++I+I E+ ++MF IQG +
Sbjct: 299 QDIRVQNISIPSDMVGCIIGRGGSKISEIRRISGSKISIAKAPHDETGERMFTIQGTASS 358
Query: 343 VSLAQYLINMCIELQKN 359
A Y++ +E +KN
Sbjct: 359 NEKALYMLFQTLEAEKN 375
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 178/405 (43%), Gaps = 84/405 (20%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACP 60
N + ++DE + +R +S E + +IG GG V ++R+ SGAK +++D GA
Sbjct: 118 NSNQQVDETNWLHIRACIGTS----EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAV- 172
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMEN 118
+RI+TVSG VD V A+ + R+L ED
Sbjct: 173 ERILTVSGQVDA----------------------VSKAFGLIVRTLNQEDLETPSTSTSK 210
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P ++L+IP GS+IGK G +I++I++ S A + + +LP S ER + V G
Sbjct: 211 AYP----MRLLIPHILIGSIIGKAGVRIREIQEASNAKLNASDTLLPNSGERSLIVLGVA 266
Query: 179 DTISQAIYQICLVLIECTLQVVKG-AVIPYEPKTMNAGPVILSGG--QAYTLH---GEYA 232
D + A+Y + L+E + G A Y ++ A V+ G Q Y G+Y+
Sbjct: 267 DAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGGQYS 326
Query: 233 VPV----QEVAGKKQPHPLAGLAVLGIEG-------IGSTSLTPAALAALSGSRVKSGGK 281
P QE A + H G + G G ++ A S SR GG
Sbjct: 327 HPQNFRRQEPAQRTPAH-GGGYGAPHMHGQPPQQSPYGHPNM---PYGAASPSRGPYGGP 382
Query: 282 DTGDDF--------------------------VETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
+ + +I + +D+ G +IGK G+++ EIRQ
Sbjct: 383 AAPTPYGAHPAAAPVAHGAAPHAPVGSIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQ 442
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
+SG+ I I+ T+ S++++ I G QE +A Y++ +E +K+
Sbjct: 443 LSGSVIKINEPTDNSNERLVTITGTQECNQMALYMLYSRLESEKH 487
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 158/360 (43%), Gaps = 55/360 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVS 67
E+ + + V E +IG G V LR+++G + ++ P DR++TV+
Sbjct: 34 EEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSK-VVPGVHDRVLTVT 92
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPL 124
G++ TG + AY + SL + N + P+
Sbjct: 93 GAL---------TG-------------IADAYGLVADSLVKGAPQMGMGGVVGNPNTHPI 130
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+L+I G++IG+ G KIK I+D SG + +MLP STERIV V G PD I +A
Sbjct: 131 --RLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPDGIQKA 188
Query: 185 IYQI--CLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
+++I CLV E Q G V+ Y P + GP L+G A PV AG
Sbjct: 189 VWEIGKCLVDDE---QRGYGTVL-YSPAVRVQGGGP---------PLNGTGA-PVGPGAG 234
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAG 300
P G T PA + + G+D I + D+ G
Sbjct: 235 YGAPRSYNRTG----NGADFTGAAPAPYSPRRQEGPLPTTNEDGEDIQTQNISIPADMVG 290
Query: 301 CVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
C+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G A A YL+ +E +K
Sbjct: 291 CIIGRGGSKISEIRKSSGARISIAKAPHDETGERMFTITGGSAANEKALYLLYENLEAEK 350
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 170/398 (42%), Gaps = 82/398 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ S AK +++D GA +RI+TV
Sbjct: 120 DETAWIHVRSVISSP----EAATIIGKGGENVSKIREMSNAKCTVSDYQKGAV-ERILTV 174
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + N + L
Sbjct: 175 SGVVDA----------------------VAKAFGLIIRTLNNEPLAE--PSNTHSKTYPL 210
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 211 RLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 270
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKT------------MN 213
+ L+E + G V+PY P+ N
Sbjct: 271 YVGSTLLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVPYVPQPAGGNFGNRDYYQRN 330
Query: 214 AGPVILSGGQAYTLHG----EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP--AA 267
GP + HG +Y P QP+P + G + P A
Sbjct: 331 RGP------DPRSHHGMPPSQYPAPYG-APHPAQPNPAVPMHYGAHAAGGYGAAAPHVAP 383
Query: 268 LAALSGSRVKSGGKD---TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
+G + G + +I + +D+ G +IGK G ++ EIRQISG+ I I+
Sbjct: 384 HVGHAGPAPHAAGPHGAPVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKIN 443
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNT 361
+ S++++ I G +E +A YL+ +E +K+ +
Sbjct: 444 EPQDNSNERLVTITGTEECNRMALYLLYQRLESEKHRS 481
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 157/356 (44%), Gaps = 76/356 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+ +R L V+ + +IG GG V LR+ +G K ++ +R++T++GS +
Sbjct: 1 MALRAL----VSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGSPEG 56
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC----SPQPLQLKL 128
+ AY + L ++ +P + ++L
Sbjct: 57 ----------------------IAKAYQHIIAQLVSASAGSPELDASVVATNPHTM-IRL 93
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
++ G++IG+GG KIK I+D SGA + DMLP STER+V VHG PD I +AIY+I
Sbjct: 94 LVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGRAIYEI 153
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
L+E +E N G V+ HP A
Sbjct: 154 SKSLLE-----------DWE---RNTGTVLY-------------------------HPQA 174
Query: 249 GLAVLGIEGIGSTS-LTPAALAALSGSRVKSGGKDTGDDFVETE-IVLTDDIAGCVIGKA 306
A ST+ +P A +G + T + + T+ I + D+ GC+IG+
Sbjct: 175 AEASGAAARRPSTNGFSPGARRRAISPTPSAGSQSTPNALIRTQNISIPSDMVGCIIGRG 234
Query: 307 GSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
G+++ EIR++SG++I+I E+ ++MF I G EA A YL+ +E +K
Sbjct: 235 GTKITEIRRLSGSKISIAKAPHDETGERMFTIVGSPEANEKALYLLYNQLESEKER 290
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 177/390 (45%), Gaps = 70/390 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S+ E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 114 DESSWIHIRAVISSA----EAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAV-ERILTV 168
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L +++ PL
Sbjct: 169 SGVVDAA----------------------AKAFGLIIRTLNGEPLDQPSTPQSRTYPL-- 204
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L++P GS+IGKGG +I++I++ SGA + + LP+STER V V G D + A Y
Sbjct: 205 RLLVPHVLIGSIIGKGGVRIREIQEQSGARLNASDACLPLSTERSVVVLGVADAVHIATY 264
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPV-ILSGGQAYTLH------GEYAVP----V 235
+ L+E + G T + GP ++ GG + G Y P
Sbjct: 265 YVASTLLEQLTERFGGPTASAY-ATRSGGPAGVIPGGMQVVPYVPQPAGGNYGHPDNVRH 323
Query: 236 QEVAGKKQPHPLAGLAVLGIEGI--GSTSL----TPAA----LAALSGSRVKSGGKDT-- 283
++ ++ P G G G S+ +PAA +A +V GG +
Sbjct: 324 NDIRSRQTPAAQYGQPYAQGPGPQQGGASMHYGGSPAAGYGGVAPQQPQQVGHGGPASHA 383
Query: 284 ------------GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
G + +I + +D+ G +IGK G+++ EIRQ+SG+ I I+ + S+
Sbjct: 384 GPPAQPMQGVVPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSN 442
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+++ I G E +A Y++ +E +K+
Sbjct: 443 ERLVTITGTAECNQMALYMLYSRLESEKHR 472
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 171/405 (42%), Gaps = 83/405 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ S AK +++D GA +RI+TV
Sbjct: 120 DETAWIHVRSVISSP----EAATIIGKGGENVSKIREMSNAKCTVSDYQKGAV-ERILTV 174
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + N + L
Sbjct: 175 SGVVDA----------------------VAKAFGLIIRTLNNEPLAE--PSNTHSKTYPL 210
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 211 RLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 270
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKT------------MN 213
+ L+E + G V+PY P+ N
Sbjct: 271 YVGSTLLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVPYVPQPAGGNFGNRDYYQRN 330
Query: 214 AGPVILSGGQAYTLHG----EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP--AA 267
GP + HG +Y P QP+P + G + P A
Sbjct: 331 RGP------DPRSHHGMPPSQYPAPYG-APHPAQPNPAVPMHYGAHAAGGYGAAAPHVAP 383
Query: 268 LAALSGSRVKSGGKD---TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
+G + G + +I + +D+ G +IGK G ++ EIRQISG+ I I+
Sbjct: 384 HVGHAGPAPHAAGPHGAPVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKIN 443
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLINMCI-ELQKNNTTNTSDN 367
+ S++++ I G +E +A YL+ + ELQ N + N
Sbjct: 444 EPQDNSNERLVTITGTEECNRMALYLLYQRLGELQNNGRDSQQPN 488
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 171/354 (48%), Gaps = 54/354 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSG 68
+D+L T+R L V+ + +IG G V LR+++G K ++ +R++TVSG
Sbjct: 22 QDSL-TLRAL----VSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSG 76
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
SVD +V Y TL +T + A + S H + ++L
Sbjct: 77 SVD-----AVAKAY---TLIITQLVTASPASPVVS-SPSTVHTS-------------IRL 114
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I G++IG+ G KIK I+D SGA + + +MLP STERIV V G P+ I +A+ +I
Sbjct: 115 LISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLPQSTERIVEVQGAPEAIGRAVEEI 174
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
L+E + + G V+ + P T++ SGG G Y+ Q A ++
Sbjct: 175 GKCLLEDWERGL-GTVL-FHPGTVDD----RSGGNRR--QGSYSASPQYGAQRRA----- 221
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
G G+ + A+ + S + S + I + D+ GC+IG++G+
Sbjct: 222 -------NGDGNVRARASPPASPTHSPISS---QPPANLRTQNISIPSDMVGCIIGRSGT 271
Query: 309 RLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 272 KITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEKER 325
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 171/354 (48%), Gaps = 54/354 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSG 68
+D+L T+R L V+ + +IG G V LR+++G K ++ +R++TVSG
Sbjct: 22 QDSL-TLRAL----VSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSG 76
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
SVD +V Y TL +T + A + S H + ++L
Sbjct: 77 SVD-----AVAKAY---TLIITQLVTASPASPVVS-SPSTIHTS-------------IRL 114
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I G++IG+ G KIK I+D SGA + + +MLP STERIV V G P+ I +A+ +I
Sbjct: 115 LISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLPQSTERIVEVQGAPEAIGRAVEEI 174
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
L+E + + G V+ + P T++ SGG G Y+ Q A ++
Sbjct: 175 GKCLLEDWERGL-GTVL-FHPGTVDD----RSGGNRR--QGSYSASPQYGAQRRA----- 221
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
G G+ + A+ + S + S + I + D+ GC+IG++G+
Sbjct: 222 -------NGDGNVRARASPPASPTHSPISS---QPPANLRTQNISIPSDMVGCIIGRSGT 271
Query: 309 RLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 272 KITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEKER 325
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 160/361 (44%), Gaps = 50/361 (13%)
Query: 8 KIDEDTLI---TMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K +ED + T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 35 KTEEDYAVAELTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDR 90
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G + + + AY + + L + + N
Sbjct: 91 VLTVTGQLRS----------------------LARAYAIVAKGLLEGAPQMGMGGIVSNN 128
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 129 GTHPI--RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 186
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
I +AI++I L++ Q G V+ Y P + LSG Q + Q A
Sbjct: 187 GIEKAIWEIGKCLLD-DWQRGTGTVL-YNPAVRAS----LSGSQPLNSNPPAGNGYQNNA 240
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
+Q + A S + A G+R + G++ I + D+
Sbjct: 241 NSRQYNRTGNGADFSDGSYNRRSNSDA------GNRGYPQVTEDGEEIQTQNISIPADMV 294
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
GC+IG+ G+++ EIR+ SGA+I+I E+ ++MF I G +A A YL+ +E +
Sbjct: 295 GCIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 354
Query: 358 K 358
K
Sbjct: 355 K 355
>gi|342880804|gb|EGU81822.1| hypothetical protein FOXB_07617 [Fusarium oxysporum Fo5176]
Length = 372
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 104/373 (27%), Positives = 167/373 (44%), Gaps = 57/373 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 31 DGEPAPKTDEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 87 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPAMGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G KIK I+D SG + +MLP STERIV
Sbjct: 125 GVVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIE----CTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTL 227
V G P+ I +AI++IC L++ T V+ V+ +P +G S G +
Sbjct: 183 VQGTPEGIQRAIWEICKCLVDDWQRGTGTVLYNPVVRTQPSGSGNASGGAGFSQGSGRSD 242
Query: 228 HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
+G ++ G A + S + AAL R + G++
Sbjct: 243 YGGSPRVMRTGNG-------ADFSNGNSRPYNRRSDSDAAL------RGPPTHDENGEEI 289
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSL 345
I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 290 QTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANES 349
Query: 346 AQYLINMCIELQK 358
A +L+ +E +K
Sbjct: 350 ALFLLYENLEAEK 362
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 67/355 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
DTL T+R L V+ + +IG GG V LR ++G K ++ P DR++T+SG
Sbjct: 26 DTL-TLRAL----VSTKDAGVIIGKGGKNVADLRDQTGVKAGVSK-VVPGVHDRVLTISG 79
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
SVD V AY + L + + + S L+L
Sbjct: 80 SVDR----------------------VAKAYGLIVAQLVASNPT-SPISASSSTHTSLRL 116
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I G++IG+GG +IK I+D SGA + + DMLP STER+V VHG+ + I +A+ I
Sbjct: 117 LISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVHGSVEAIERAVDDI 176
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLH-GEYAVPVQEVAGKKQPHPL 247
L+E + + G V+ + P AG + Y+ + G Y G +Q +
Sbjct: 177 GKSLLEDWERGL-GTVL-FHP---GAGDERSGSSRRYSENRGSY-------GGSRQSNGR 224
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
G GS S + + R ++ I + D+ GC+IG+ G
Sbjct: 225 PGSP-------GSPSRQAPSSPQPTNLRTQN-------------ISIPSDMVGCIIGRGG 264
Query: 308 SRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
S++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 265 SKITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEKER 319
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P L L+ ++ G +IGKGG + D+RD +G V S ++P +R++T+ G+
Sbjct: 23 AGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGV-SKVVPGVHDRVLTISGSV 81
Query: 179 DTISQAIYQICLVLI 193
D +++A I L+
Sbjct: 82 DRVAKAYGLIVAQLV 96
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 166/365 (45%), Gaps = 53/365 (14%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRI 63
+G DE L ++R L V+ E LIG GG + +R ++ K ++ DR+
Sbjct: 17 NGHSDEPQL-SLRAL----VSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRV 71
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+VSG+VD+ V A+ + R L + ++ + + P P
Sbjct: 72 FSVSGAVDH----------------------VAAAFAEVARLLLETPLSDS---SLPPPP 106
Query: 124 L----QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ ++L+I G++IG+ G KIK I+D SGA + + +MLP STER+V + G+ +
Sbjct: 107 VGAFTSVRLLISHNLMGTVIGRSGAKIKQIQDESGARMVASKEMLPQSTERVVEIQGSVE 166
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEV 238
I A+ +I L+E + G V+ Y P V+ G A T+ G + V
Sbjct: 167 AIKTAVLEIGKCLME-DWERNTGTVL-YHPGAAGDAGVLAGGLGAQTVTGGLGGIRRSSV 224
Query: 239 AGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE-IVLTDD 297
A G G S P+ A RV D + T+ I + D
Sbjct: 225 A-----------PSFGFGGERRMSGRPSISAPSETRRVSDAPPMVNDPNLRTQNISIPSD 273
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIE 355
+ GC+IG+ G+++ EIR++SG++I+I E+ ++MF I G +A A L+ +E
Sbjct: 274 MVGCIIGRGGTKITEIRRLSGSRISIAKAPHDETGERMFTIVGTADATERALMLLYSQLE 333
Query: 356 LQKNN 360
+K
Sbjct: 334 SEKER 338
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI--NIHTGTESHKKMFHIQGCQEAVS 344
F ++++ ++ G VIG++G+++ +I+ SGA++ + +S +++ IQG EA+
Sbjct: 110 FTSVRLLISHNLMGTVIGRSGAKIKQIQDESGARMVASKEMLPQSTERVVEIQGSVEAIK 169
Query: 345 LAQYLINMCI--ELQKNNTT 362
A I C+ + ++N T
Sbjct: 170 TAVLEIGKCLMEDWERNTGT 189
>gi|225563195|gb|EEH11474.1| KH domain RNA binding protein [Ajellomyces capsulatus G186AR]
gi|240275775|gb|EER39288.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 495
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 171/400 (42%), Gaps = 86/400 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 132 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 186
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 187 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 222
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLVILGVADAVHIATY 282
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 283 YVAVTLVEQLTERFGGPAASAYATRSGGAAGVVPGGMQVVPYVPQP--------AGGQYG 334
Query: 224 ---AYTLH----------GEYAVP-VQEVAGKKQ-PHPLAGLAVLGIEGI-GSTSLTPAA 267
+ H G Y VP V G+ Q PH G G+ PA
Sbjct: 335 HPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAP 394
Query: 268 LAALSGSRVKSG------GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
A + V G G V +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 395 YGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVI 454
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
I+ + S++++ I G E +A Y++ +E +K+
Sbjct: 455 KINEPQDNSNERLVTITGTPECNQMALYMLYSRLESEKHR 494
>gi|429859891|gb|ELA34647.1| kh domain rna binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 471
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 170/391 (43%), Gaps = 71/391 (18%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 109 DERDWIHIRAVISSP----EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAV-ERILTV 163
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + + PL
Sbjct: 164 SGVVDAA----------------------AKAFGLIIRTLNNEPLAEPSSAQSKTYPL-- 199
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 200 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 259
Query: 187 QICLVLIECTLQVVKGA---------------------VIPY--EPKTMNAG------PV 217
+ L+E G V+PY +P T N G
Sbjct: 260 YVGSTLLEQLNDRFGGPAASAYATRSGGPAGVVPGGMQVVPYCPQPTTGNYGNRENYNRR 319
Query: 218 ILSGGQAYTLHGEYAVPV--QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSG-- 273
+ Q + YA P A P+ A + + P A AA+
Sbjct: 320 HDARAQHHLPAAPYAQPYPGHHAAQPNPAMPIHYGAAQAGGYGAAAPMQPHAGAAVPQPH 379
Query: 274 ----SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
++ GG G + +I + +D+ G +IGK G ++ EIRQISG+ I I+ +
Sbjct: 380 GAHPAQPMHGGAMPGAPLTQ-QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDN 438
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
S++++ I G +E +A Y++ +E +K+
Sbjct: 439 SNERLVTITGTEECNRMALYMLYSRLESEKH 469
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 162/363 (44%), Gaps = 67/363 (18%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
GD + T I+MR L +S + S +IG G + +R +S A+++I++ P+R
Sbjct: 103 GDSSETQATQISMRTLIVTS----DASIIIGKSGKHINEIRDKSNARLNISEIIPGNPER 158
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
I+TVSG +D V A+ + R + D ++ + +
Sbjct: 159 ILTVSGPLDA----------------------VSKAFGLIVRRINDEPFDQPSVPGS--K 194
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
+ ++ ++P + GS+IGK G KIK+I++ SGA + MLP STER++++ G D +
Sbjct: 195 SVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGVADAVH 254
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
A+Y + +L+E Q +PY P +GG + A P A +
Sbjct: 255 IAVYYVGTILLEH--QDRNANNLPYRP---------TAGGPSTRPPAPGANP---YAAPQ 300
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
QP G G+ + A GS+ + +I + +D+ GC+
Sbjct: 301 QPF---GYGAPAPPFGGAPAGAGGAPQLPPGSQTQ-------------QIFIPNDLVGCI 344
Query: 303 IGKAGSRLLEIRQISGAQINI-------HTGTESHKKMFHIQGCQEAVSLAQYLINMCIE 355
IGK GS++ EIR +S + I I G ++++ I G + +A L+ +E
Sbjct: 345 IGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLE 404
Query: 356 LQK 358
+K
Sbjct: 405 QEK 407
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 177/392 (45%), Gaps = 59/392 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K +E+ +T+R + V+ E +IG GG V LR E+G K ++
Sbjct: 31 DGEPAPKTEEEYAQAQLTLRAI----VSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + ++L + +
Sbjct: 87 QGVHDRVLTITGGCEA----------------------ISRAYAIVAQALLEGAPSLGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 125 GVPQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTM-NAGPVILSGGQAYTLHG- 229
V G PD I AI++I L++ Q G V+ Y P +T + P + +Y G
Sbjct: 183 VQGTPDGIRAAIWEISKCLVD-DWQRGTGTVL-YNPVVRTQPGSTPAVGGTSPSYPSTGG 240
Query: 230 ----EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGD 285
EY+ P G A G G + + + + SR + G+
Sbjct: 241 GRSQEYSSPRVLRTGNG--------ADFSSNGGGQRPYSRRS-DSDAASRGPPTHDENGE 291
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAV 343
+ I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 292 ELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTSKAN 351
Query: 344 SLAQYLI--NMCIELQKNNTTNTSDNPEPADL 373
A +L+ N+ E + + TS+ +DL
Sbjct: 352 ESALFLLYENLEAEKMRRSQAQTSEAISRSDL 383
>gi|258574629|ref|XP_002541496.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237901762|gb|EEP76163.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 491
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 168/396 (42%), Gaps = 85/396 (21%)
Query: 3 GNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GAC 59
G G DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA
Sbjct: 120 GQSHGTQDETGFIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAV 175
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
+RI+TVSG D V A+ + R+L + ++
Sbjct: 176 -ERILTVSGPQDA----------------------VAKAFGLIIRTLNNEPLDAPSTAQS 212
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
PL +L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D
Sbjct: 213 KTYPL--RLLIPHILIGSIIGKSGVRIREIQEHSGARLNASDSCLPLSTERSLVILGVAD 270
Query: 180 TISQAIYQICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVI 218
+ A Y + L+E + G V+PY P+
Sbjct: 271 AVHIATYYVAATLVEQLTERFGGPAASAYATRSGGPAGVIPGGMQVVPYVPQP------- 323
Query: 219 LSGGQ-----AYTLHGE---------YAVPVQEVAGKKQPH----PLAGLAVLGIEGIGS 260
+GGQ ++ H Y +P + PH P+ A G+
Sbjct: 324 -AGGQYGHPDSFKRHHPQANRAMSTGYGMPYMQGGPGPSPHAMQQPIHYNASPRQGYTGA 382
Query: 261 TSLTPAALAALS-----GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
PA A G+ + G + +I + +D+ G +IGK G+++ EIR
Sbjct: 383 GPHQPAPYGAPQPPHSHGTPAQPMGAPVAGGPLTQQIFIPNDMVGAIIGKGGAKINEIRH 442
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+SG+ I I+ + S++++ I G QE +A Y++
Sbjct: 443 LSGSVIKINEPQDNSNERLVTITGTQECNQMALYML 478
>gi|261195190|ref|XP_002623999.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239587871|gb|EEQ70514.1| KH domain RNA binding protein [Ajellomyces dermatitidis SLH14081]
gi|239610640|gb|EEQ87627.1| KH domain RNA binding protein [Ajellomyces dermatitidis ER-3]
gi|327348926|gb|EGE77783.1| KH domain RNA binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 496
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 174/401 (43%), Gaps = 88/401 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 133 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 187
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 188 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 223
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 224 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLVILGVADAVHIATY 283
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 284 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYIPQP--------AGGQYG 335
Query: 224 ---AYTLH----------GEYAVP-VQEVAGKKQ-PHPLAGLAVLGIEGI-GSTSLTPAA 267
+ H G Y VP V G+ Q PH G G+ PA
Sbjct: 336 HPDTFKRHQPQANRAVSTGGYGVPYVHGQPGQPQMPHQALHYGSSSRPGYTGAGPHQPAP 395
Query: 268 LAALSGSRVK-------SGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
A ++V +GG G V +I + +D+ G +IGK G+++ EIR +SG+
Sbjct: 396 YGAPQPTQVHGAPTAQPAGGVVPGAP-VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSV 454
Query: 321 INIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
I I+ + S++++ I G E +A Y++ +E +K+
Sbjct: 455 IKINEPQDNSNERLVTITGTPECNQMALYMLYSRLESEKHR 495
>gi|157116844|ref|XP_001652871.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108883399|gb|EAT47624.1| AAEL001245-PA, partial [Aedes aegypti]
Length = 190
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 96/186 (51%), Gaps = 34/186 (18%)
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG-KKQPHPLAGLAVL------ 253
KGA IPY PK GPVI++ GQAYT+ G YAVP QEV G K P L
Sbjct: 4 KGATIPYRPKPQMNGPVIVANGQAYTIQGNYAVPAQEVGGLAKNPLAGLAALGLAGAIPT 63
Query: 254 ---GIEGIGS-TSLTP----------------AALAALSGSRVKSGGKDTGDDFVET--- 290
G+ G+ L+P ALAAL+GS++++ V++
Sbjct: 64 NTGGLNPTGNFVELSPIYLHHPHSSPPSSVSPVALAALAGSQLRTNNNRNVQSQVQSQSH 123
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK----KMFHIQGCQEAVSLA 346
E+ + +D+ GC+IGK G+++ EIRQISGA I I E + I G ++V+LA
Sbjct: 124 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALA 183
Query: 347 QYLINM 352
QYLINM
Sbjct: 184 QYLINM 189
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 112 NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTE 169
N NR Q ++ +P G +IGKGG KI +IR +SGA +++++ + +T+
Sbjct: 109 NNNRNVQSQVQSQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTD 168
Query: 170 RIVTVHGNPDTISQAIYQICL 190
R +T+ GNPD+++ A Y I +
Sbjct: 169 RTITITGNPDSVALAQYLINM 189
>gi|395334662|gb|EJF67038.1| cytoplasmic protein [Dichomitus squalens LYAD-421 SS1]
Length = 327
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 167/353 (47%), Gaps = 69/353 (19%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
D +T+R L V+ + +IG G V LR+++G K ++ +R++TV+GS
Sbjct: 26 DDSLTLRAL----VSTKDAGVIIGKAGKNVAELREQTGVKAGVSKVIPGVHERVLTVTGS 81
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
V+ V AY+ + L + + N S ++L+
Sbjct: 82 VEG----------------------VAKAYSLIVSQLVSANPSSPVTSNSSSPTTAIRLL 119
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I GS+IG+ G KIK I+D SGA + + DMLP STERIV V G+ ++I +AI +I
Sbjct: 120 ISHNLMGSVIGRNGLKIKAIQDSSGARMVASKDMLPQSTERIVEVQGSSESIGRAIEEIG 179
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
L+E + V G V+ + P T + E +G++ HP
Sbjct: 180 RCLLEDWERGV-GTVL-FHPGTGD-----------------------ERSGRR-THPTGR 213
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
A +G G TS +P + ++ G+ +++ I + D+ GC+IG+ G++
Sbjct: 214 RA--NGDGRGRTSPSPNSPSSPQGTNLRT-----------QNISIPSDMVGCIIGRNGTK 260
Query: 310 LLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 261 ITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALFLLYNQLESEKER 313
>gi|378731796|gb|EHY58255.1| hypothetical protein HMPREF1120_06267 [Exophiala dermatitidis
NIH/UT8656]
Length = 492
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 170/405 (41%), Gaps = 96/405 (23%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++RK SGAK +++D GA +RI+TV
Sbjct: 129 DETNWIHIRAVISSA----EAATCIGKGGENVTQIRKLSGAKCTVSDYSRGAV-ERILTV 183
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SGS + V A+ + R+L + ++ PL
Sbjct: 184 SGSQEA----------------------VSKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 219
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 220 RLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVVLGVADAVHIATY 279
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 280 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVIPGGMQVVPYVPQP--------AGGQYG 331
Query: 224 ---AYTLHGEYAVPVQEVA----GKKQPH--------------------PLAGLAVLGIE 256
Y H +P Q G Q H P G AV +
Sbjct: 332 HPDTYKRHN--TLPPQRAPAQPYGAPQVHGAAPQPYAPYPQPYAATPRTPSYGAAVP--Q 387
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
G P G + G + +I + +D+ G +IGK G+++ EIR +
Sbjct: 388 PAGPYGQVPPQPVVPHGQPAQPAHGMPGQPITQ-QIFIPNDMVGAIIGKGGAKINEIRHL 446
Query: 317 SGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
SG+ I I+ + S++++ I G QE +A Y++ +E +K+
Sbjct: 447 SGSVIKINEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKHR 491
>gi|119195161|ref|XP_001248184.1| hypothetical protein CIMG_01955 [Coccidioides immitis RS]
gi|303310665|ref|XP_003065344.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105006|gb|EER23199.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|392862573|gb|EAS36772.2| KH domain RNA-binding protein [Coccidioides immitis RS]
Length = 366
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 158/358 (44%), Gaps = 58/358 (16%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + V+ E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 46 SMLTLRAI----VSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 101
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + +SL + ++N P+ +
Sbjct: 102 QGT----------------------AKAYGMVAKSLLEGAPQMGMGGIIQNNGTHPV--R 137
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 138 LLISHNQMGTIIGRNGLKIKCIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 197
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTM-NAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
I LI+ Q G V+ Y P N G +++ + P P+
Sbjct: 198 IGKCLID-DWQRGTGTVL-YNPAVRANVG--------GASMNSAFVGP--------NPNT 239
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG----KDTGDDFVETEIVLTDDIAGCV 302
+G S P S + G + G++ I + D+ GC+
Sbjct: 240 YSGRPYNRTGNGADFSDHPGTYNRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCI 299
Query: 303 IGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+ +E +K
Sbjct: 300 IGRGGSKISEIRRSSGARISIAKAAHDETGERMFTIMGSAQANEKALYLLYENLEAEK 357
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 80 TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLI 139
TG PGH + + ++N + S + I E + L L+ ++ G +I
Sbjct: 10 TGAPGHE------EGLSESFNRVNLSEQGEDITPKTEEEYAQSMLTLRAIVSTKEAGVII 63
Query: 140 GKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV 199
GK G + D+RD +G V S ++ +R++TV G ++A + L+E Q+
Sbjct: 64 GKAGKNVADLRDETGVKAGV-SKVVQGVHDRVLTVTGPLQGTAKAYGMVAKSLLEGAPQM 122
Query: 200 VKGAVI 205
G +I
Sbjct: 123 GMGGII 128
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 162/377 (42%), Gaps = 65/377 (17%)
Query: 1 MDGNGD-GKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--G 57
MDG G+ E+ + + V+ E +IG G V LR E+G + ++
Sbjct: 26 MDGEGEVAPRTEEEYAESQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQ 85
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRN--- 114
DR+++V+GS+ + AY + L +
Sbjct: 86 GVHDRVLSVTGSLSG----------------------ISKAYGLAAKGLLEGAPAMGMGG 123
Query: 115 --RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIV 172
R + P ++L+I G++IG+ G KIK I+D SG + +MLP STERIV
Sbjct: 124 VIRTDGTHP----IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIV 179
Query: 173 TVHGNPDTISQAIYQICLVLIECTLQ----VVKGAVIPYEPKTMNAGPVILSGGQAYTLH 228
V G+P I +A+++I LI+ + V+ V+ +P AGP LS G
Sbjct: 180 EVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPVVRVQP---GAGPGPLSNGG----- 231
Query: 229 GEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK-----DT 283
+ P + G+ G S +P A + SGS S +
Sbjct: 232 ---SAPSGSMGGRSYNRTGHGADF---------SDSPPAFSRRSGSDAASRPPPPTHTED 279
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G++ I + D+ GC+IG+ G+++ EIR+ S A+I+I ++ ++MF I G
Sbjct: 280 GEEMQTQNISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKAPHDDTGERMFTITGSAS 339
Query: 342 AVSLAQYLINMCIELQK 358
A A YL+ +E +K
Sbjct: 340 ANEKALYLLYENLEAEK 356
>gi|389641821|ref|XP_003718543.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
gi|351641096|gb|EHA48959.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae 70-15]
Length = 483
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 169/391 (43%), Gaps = 71/391 (18%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ S AK +++D GA +RI+TV
Sbjct: 121 DESAWIHIRAVISSP----EAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAV-ERILTV 175
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + ++ + PL
Sbjct: 176 SGIVDA----------------------VAKAFGLIIRTLNNEPLSEPSSAHSKTYPL-- 211
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+S+ER + V G D + A Y
Sbjct: 212 RLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSSERSLVVMGVADAVHIATY 271
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTM--NAGPVILSGGQ 223
+ L+E G V+PY P+ N G G +
Sbjct: 272 YVGSTLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRR 331
Query: 224 AYTLHGEY------AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVK 277
G+ Q QP+P A G + + PA +G +V
Sbjct: 332 PDPRAGQMPPPAAHPYAPQNPYAPHQPNP-AVPPHYGAQAGAYGAHVPAPHVGHAGPQVH 390
Query: 278 SGGKD--------TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
G + +I + +D+ G +IGK G ++ EIRQ+SG+ I I+ +
Sbjct: 391 GAPHQPMHGQMPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDN 450
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
S++++ I G +E +A Y++ +E +K+
Sbjct: 451 SNERLVTITGTEECNRMALYMLYSRLESEKH 481
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 165/377 (43%), Gaps = 66/377 (17%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA 58
DG K DE+ T +T+R + S E +IG G V LR E+G K ++
Sbjct: 42 DGEPAPKTDEEYAQTQMTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSK-V 96
Query: 59 CP---DRIVTVSGSVDNSS------TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY 109
P DR++T++G + S S++ G P + N
Sbjct: 97 VPGVYDRVLTITGGCEAISKAYAKVASALMEGAPAMGMGGVVAAN--------------- 141
Query: 110 HINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE 169
P +KL+I G++IG+ G KIK I+D+SG + +MLP STE
Sbjct: 142 --------GTHP----IKLLISHNQMGTVIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTE 189
Query: 170 RIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG 229
R+V V G P+ I +A ++IC L++ Q +G V+ Y P + +
Sbjct: 190 RVVEVQGTPEGIQRATWEICKCLVD-DWQRGQGTVL-YNPVVRTGTGAGAPAMGGASSY- 246
Query: 230 EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGS--TSLTPAALAALSGSRVKSGGKDT---- 283
QE A P G + + G G+ ++ P S S G T
Sbjct: 247 -----PQERA------PYGGSSRVTRTGNGADFSNGGPRQYNRRSDSDAAQRGPPTHDEN 295
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I ++ ++MF I G +
Sbjct: 296 GEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAK 355
Query: 342 AVSLAQYLINMCIELQK 358
A A YL+ +E +K
Sbjct: 356 ANETALYLLYENLEAEK 372
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 156/351 (44%), Gaps = 47/351 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R + S E +IG G V LR E+G K ++ DR++TV+G + +
Sbjct: 47 LTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRS 102
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLKLV 129
+ AY + + L + + N P+ +L+
Sbjct: 103 ----------------------LARAYAIVAKGLLEGAPQMGMGGIVSNNGTHPV--RLL 138
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +AI++I
Sbjct: 139 ISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWEIG 198
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
L++ Q G V+ Y P + LSG Q + Q +Q +
Sbjct: 199 KCLLD-DWQRGTGTVL-YNPAVRAS----LSGSQPLNNNPPAGNGYQNNTSSRQYNRTGN 252
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
A G S + A G+R + G++ I + D+ GC+IG+ G++
Sbjct: 253 GADFSDGGYNRRSNSDA------GNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGTK 306
Query: 310 LLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ EIR+ SGA+I+I E+ ++MF I G +A A YL+ +E +K
Sbjct: 307 ITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEK 357
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 158/367 (43%), Gaps = 80/367 (21%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 41 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPL 96
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + + L + + N P+ +
Sbjct: 97 QGT----------------------ARAYALVAKGLLEGAPQMGMGGVVSNNGTHPV--R 132
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 133 LLISHNQMGTIIGRSGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 192
Query: 188 ICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
I LI+ Q G ++ Y P ++ PV + G Y+ +P
Sbjct: 193 IGKCLID-DWQRGTGTIL-YNPAVRASVGTAPVNQNVGNGYS---------------SRP 235
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT-----------GDDFVETEIV 293
+ G A + SG + DT G++ I
Sbjct: 236 YNRTG--------------NGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNIS 281
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLIN 351
+ D+ GC+IG+AGS++ EIR+ SGA+I+I ++ ++MF I G +A A YL+
Sbjct: 282 IPADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALYLLY 341
Query: 352 MCIELQK 358
+E +K
Sbjct: 342 ENLEAEK 348
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 108 DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMS 167
D I E + L L+ ++ + G +IGK G + D+RD +G V S ++P
Sbjct: 27 DMDITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVPGV 85
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
+R++TV G ++A + L+E Q+ G V+
Sbjct: 86 HDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGVV 123
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 164/379 (43%), Gaps = 56/379 (14%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG ++RLR + A ++I D + P+R++ +S + + T V P
Sbjct: 295 AVIGKGGENIKRLRSQYCASVNIPDSSTPERVLNISCANVATLTDCVSDLIP-------- 346
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
L+D PQ ++++++ + G++IG+ G KIK++RD
Sbjct: 347 -------------RLDD--------GKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRD 385
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
++GA ++V S+ P+STER++ G+ + I AI + + C +KG Y+
Sbjct: 386 ITGAGIRVYSECAPLSTERVIQFSGDKEKIVNAIRHVKEI---CEETPIKGVERLYDANN 442
Query: 212 MNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG----LAVLGIEGIGSTSLTPAA 267
+ + GG + + +G P A V I + + +P +
Sbjct: 443 YDMSYALDYGGYTTDRNWRSNSTTRRSSGIHSSSPAASTPHFTGVNEISPMQALGYSPMS 502
Query: 268 LAALSGSRVKSGGKDTGDDFVET-EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
L A ++ + T ++ + ++ G +IGK G R+ IR+ SGAQI +
Sbjct: 503 LYA--------------ENLIATVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPP 548
Query: 327 T-ESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEP-ADLDAAISAFMTAS 384
T +S +++ I G + L QYL+ CI + + T+ S E A ++ + F
Sbjct: 549 TPDSDERIITISGTTSQIKLGQYLLQQCIPCPETHYTDMSGGVEQTASVETLVEVFCCVF 608
Query: 385 VNSSLIEKPTPHPGSMVTL 403
V + PH + L
Sbjct: 609 V---FFAESVPHAQLLARL 624
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 132/312 (42%), Gaps = 93/312 (29%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
+I MRCL + + S +IG G V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 1 MIHMRCL----IVTQDASIIIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGPLD 56
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + +K +IP
Sbjct: 57 A----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIP 92
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGK G KIK+I+D SGA + + MLP STER+++V G D I A Y + +
Sbjct: 93 NSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYVGNI 152
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
LIEC ++ Y P P PL+G
Sbjct: 153 LIECQERMPSSTNSSYRPSNRAPRP-----------------------------PLSG-- 181
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
G+ S T +I + +D+ GC+IGK GS++
Sbjct: 182 -------GAQSYT-------------------------QQIYIPNDLVGCIIGKGGSKIN 209
Query: 312 EIRQISGAQINI 323
EIR +S +QI I
Sbjct: 210 EIRHMSASQIKI 221
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 44/183 (24%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
+ + +IG G ++ ++ SGA+++ ++G P +R+++V+G D + T Y G
Sbjct: 94 SRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD---AIHIATYYVG 150
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRN-RMENCSPQP--------LQLKLVIPATHC 135
+ L C+ N + R N +P+P ++ IP
Sbjct: 151 NIL-------------IECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLV 197
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLPMST-------------ERIVTVHGNPDTIS 182
G +IGKGG KI +IR +S + +++ M P T ER+V + G P I
Sbjct: 198 GCIIGKGGSKINEIRHMSASQIKI---MEPGVTPPGMSGPAGGTENERLVIITGQPHNIQ 254
Query: 183 QAI 185
A+
Sbjct: 255 MAV 257
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G +IGK G+++ EI+ SGA++N G S +++ + G +
Sbjct: 81 GSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTSDNPEPAD 372
A+ +A Y + N+ IE Q+ ++T+ + P++
Sbjct: 141 AIHIATYYVGNILIECQERMPSSTNSSYRPSN 172
>gi|213410260|ref|XP_002175900.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
gi|212003947|gb|EEB09607.1| RNA-binding protein that suppresses calcineurin deletion Rnc1
[Schizosaccharomyces japonicus yFS275]
Length = 381
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 146/343 (42%), Gaps = 65/343 (18%)
Query: 7 GKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRI 63
G +D+ T + + ++ E +IG G V LR + K IT A P DR+
Sbjct: 74 GLMDDAAYATQQLTLRALLSTREAGIIIGKSGKNVAELRSTTNVKAGITK-AVPNVHDRV 132
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+T+SGS++N V AY F+ N N P
Sbjct: 133 LTISGSLEN----------------------VVRAYRFIIDIFAKNSTNANGTPVDPHAP 170
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+L+L+I + GS+IG+ G +IK I+D + + DMLP STER V VHG + +
Sbjct: 171 RKLRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEVHGTVENLHA 230
Query: 184 AIYQICLVLIECTLQVVKGA-VIPYEP--KTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
AI++I LI+ +GA + Y P + P + + +A + A+P + G
Sbjct: 231 AIWEIGKCLID---DWERGAGTVFYNPVSRLTQPFPTVATSPRAVSQQMTPAIPSPMMDG 287
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAG 300
P+ PAA + I + D+ G
Sbjct: 288 GAAPY----------------FFPPAA---------------PQQPRITQNISIPADMVG 316
Query: 301 CVIGKAGSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQE 341
C+IG+AGS++ EIR+ SG++I+I E+ ++MF I G E
Sbjct: 317 CIIGRAGSKISEIRRSSGSKISIAKEPHDETGERMFTITGTHE 359
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 172/398 (43%), Gaps = 79/398 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+MR L + + S +IG G V +R++SGA+++I++ P+RI+ V G++D
Sbjct: 88 ISMRAL----IVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALDA 143
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 144 ----------------------VSKAFGLIVRRINDEPFDVASVPGS--RAVTIKFIIPN 179
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IG+GG KIK+I+D SGA + + MLP STERI++V G D I A+Y I +L
Sbjct: 180 SRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADAIHIAVYYIGTIL 239
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
+E Y+ + N GP ++ G Y ++QP +A
Sbjct: 240 LE------------YQER--NPGP--------HSGIGTY---------RQQPQGMA---- 264
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
AA + +G +GG + +I + + + G +IGKAGS++ E
Sbjct: 265 -------------AAQPSFTGVAPGAGGASAPGSQTQ-QIFIPNSLVGAIIGKAGSKINE 310
Query: 313 IRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPAD 372
IR S QI + + + + V++ +N+ I +Q ++ + A
Sbjct: 311 IRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQPVNINIAVQMLYHRLEAEKAKAAG 370
Query: 373 LDAAISAFMTASVNSSLIEKPTPHPGSMVTLGGLSELL 410
+ A T +VN K P + G L EL+
Sbjct: 371 MGGGQPAVATVNVNEIPCAKRASQPSASTGHGDLCELV 408
>gi|315050398|ref|XP_003174573.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
gi|311339888|gb|EFQ99090.1| Poly(rC)-binding protein 3 [Arthroderma gypseum CBS 118893]
Length = 489
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 163/387 (42%), Gaps = 80/387 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + +R + S+ E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 126 DETGWVHIRAVISSA----EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 180
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 181 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 216
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVILGVADAVHIATY 276
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ + L+E + G V+PY P+ P G
Sbjct: 277 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQ-----PAGGQYGHPD 331
Query: 226 TLH-----------GEYAVPVQEVAGKKQPHPLAGLAV-----LGIEGIGSTSLTP-AAL 268
TL G Y VP + P L G G G P A
Sbjct: 332 TLRRNNPQANRAAPGGYGVPYMQQPAPHPHAPQPSLHYGASPRAGYTGAGPHQPAPYGAP 391
Query: 269 AALSGSRVKSGGKDTG----DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
G V G G + +I + +D+ G +IGK G+++ EIRQ+SG+ I I+
Sbjct: 392 QPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKIN 451
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ S++++ I G QE +A Y++
Sbjct: 452 EPQDNSNERLVTITGTQECNQMALYML 478
>gi|340522569|gb|EGR52802.1| predicted protein [Trichoderma reesei QM6a]
Length = 369
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 166/379 (43%), Gaps = 54/379 (14%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 31 DGELAPKTDEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHI--NR 113
DR++T++G D + AY + R+L E +
Sbjct: 87 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPVVGMG 124
Query: 114 NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++N P+ KL+I G++IG+ G KIK I+D+SG + DMLP STERIV
Sbjct: 125 GVVQNNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKDMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLHGE 230
V G P+ I +AI++I L++ Q G V+ Y P + + G +
Sbjct: 183 VQGTPEGIQRAIWEISKCLVD-DWQRGTGTVL-YNPVVRTQSSGSGSLGGSGYGNGSGRD 240
Query: 231 YAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
Y P G A + G S + AA +R + G++
Sbjct: 241 YGSPRVMRTGNG-----ADFSNGGSRPFSRRSDSDAA------TRGPPTHDENGEEIQTQ 289
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQY 348
I + D+ GC+IG+ GS++ +IR+ SGA+I+I E+ ++MF I G +A A +
Sbjct: 290 NISIPADMVGCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALF 349
Query: 349 LINMCIELQKNNTTNTSDN 367
L+ +E +K + D
Sbjct: 350 LLYENLEAEKMRRSQMQDQ 368
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 156/365 (42%), Gaps = 42/365 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D+ T + R L ++NE + ++G GG + R+++ S A++++++ P+R++TV
Sbjct: 75 DDPTYVHFRML----CSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVR 130
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
G + V A+ + R++ D N+ + + LK
Sbjct: 131 GPAEY----------------------VAKAFGLITRAIMDEPFNQ--ASTVESKQINLK 166
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+ P T G +IGK G + ++I D S A ++ + +LP ST+RI+ + G D I A Y
Sbjct: 167 LLFPHTIIGYIIGKRGARFREIEDNSAAALKASDQILPASTDRILHITGVADAIHIATYY 226
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE-YAVPVQEVAGKKQPHP 246
+ +IE + K Y P N + G + +G Y V +V P
Sbjct: 227 VAQTVIEHKQHLAKAVF--YNPANCNQPSTPVGGNASRMAYGNGYPPQVMQVPAPIMQSP 284
Query: 247 LAGLAVLGIEG--IGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
G V G I + A + + +SG + D ++ + G VIG
Sbjct: 285 YMGQPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMHI-----GLVIG 339
Query: 305 KAGSRLLEIRQISG--AQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTT 362
K G L +IR I+G ++N + +K+ + A+ A LIN IE +K
Sbjct: 340 KGGKNLKDIRTITGCYVKVNDEVPGATERKLTLMSTSPFAIQQAIMLINNKIENEKQRQR 399
Query: 363 NTSDN 367
N D+
Sbjct: 400 NHRDD 404
Score = 38.1 bits (87), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 111 INRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
+ +R N P + +++ +++GKGG I I+++S A V V S+ L ER
Sbjct: 67 VTHHRPTNDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNV-SENLKGIPER 125
Query: 171 IVTVHGNPDTISQAIYQICLVLIE 194
++TV G + +++A I +++
Sbjct: 126 VITVRGPAEYVAKAFGLITRAIMD 149
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 100/372 (26%), Positives = 163/372 (43%), Gaps = 58/372 (15%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ ++T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 38 KTDEEYAQAILTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDR 93
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G++ AY+ + + L + ++N
Sbjct: 94 VLTVTGALQG----------------------CARAYSIVAKGLLEGAPQVGMGGVVQNN 131
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 132 GTHPI--RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 189
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTM----NAGPVILSGGQAYTLHGEYAVPV 235
I +A+++I LI+ Q G V+ Y P +G + +G + +G
Sbjct: 190 GIEKAVWEIGKCLID-DWQRGTGTVL-YNPAVRVSIGGSGQLNHNGDRTGGSYGGGRSYN 247
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT 295
+ G P G G G+ +L D G++ I +
Sbjct: 248 RTGNGADFSEPSGGYNRRGSGDNGNRNLPLVT--------------DDGEEVQTQNISIP 293
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMC 353
D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+
Sbjct: 294 ADMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYEN 353
Query: 354 IELQKNNTTNTS 365
+E +K + S
Sbjct: 354 LEAEKMRRSQQS 365
>gi|380479025|emb|CCF43264.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 384
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 106/390 (27%), Positives = 168/390 (43%), Gaps = 59/390 (15%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG + DE+ +T+R + S E +IG G V LR E+G K ++
Sbjct: 32 DGEPAPRTDEEYAQAQLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVV 87
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + V AY+ + R+L + +
Sbjct: 88 QGVHDRVLTITGGCQS----------------------VSEAYSIVARALLEGAPSLGMG 125
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++N P+ KL+I G++IG+ G KIK I+D SG + +MLP STERIV
Sbjct: 126 GVVQNNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVE 183
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVI--------PYEPKTMNAGPVILSGGQAY 225
V G P+ I A+++IC L++ Q G V+ P T S G
Sbjct: 184 VQGTPEGIKGAVWEICKCLVD-DWQRGTGTVLYNPAVRTQPGTTSTTGGSTATFSSGGGR 242
Query: 226 TLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT-- 283
+ +Y+ P G A + G S S S G T
Sbjct: 243 S--NDYSAPRVMRTGNG-----ADFSTNSNSNNGGGGGGGRPYGRRSDSDAASRGPPTHD 295
Query: 284 --GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 296 ENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGT 355
Query: 340 QEAVSLAQYLINMCIELQKNNTTNTSDNPE 369
+A A +L+ +E +K T+ +PE
Sbjct: 356 AKANESALFLLYENLEAEKMR-RQTATSPE 384
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 171/390 (43%), Gaps = 56/390 (14%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--AC 59
D + + D + M CL V S ++G G + R++ E+ A+I+I++
Sbjct: 56 DHDSPDNVPSDVHLRMLCL------VKHASLIVGHKGATISRIKSETSARINISNNIRGV 109
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIV V G+ D+ V AY + R+L + H N + E+
Sbjct: 110 PERIVYVRGTCDD----------------------VAKAYGMIVRALLEEHGNEDNGEDI 147
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ + L+IP G +IGK G ++++I DLS A + + + L +S +RI+T++G PD
Sbjct: 148 E---ISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPD 204
Query: 180 TISQAIYQICLVLIECTLQVVKGAV---IPYEPKTMNAGPVILSGGQAYTL----HGEYA 232
I A + I L+ ++ + V I Y+P N+ V++ Q T+ + +Y
Sbjct: 205 AIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS--VLIDHSQPNTIFHQRNHQYH 262
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV-------------KSG 279
+ ++ K + +L + T+ + A A + V +
Sbjct: 263 PSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAP 322
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G +FV+ EI + + G VIGK G + +++ +G I I E S ++ I+G
Sbjct: 323 GNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG 382
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
A A LI+ IE+ ++N +P
Sbjct: 383 TFMASQAAIMLISNKIEIDRSNAERKRRSP 412
>gi|389751124|gb|EIM92197.1| hypothetical protein STEHIDRAFT_89021 [Stereum hirsutum FP-91666
SS1]
Length = 339
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 162/352 (46%), Gaps = 62/352 (17%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVD 71
++T+R L V+ + +IG G V LR ++G K ++ +R++TV+G+VD
Sbjct: 28 VLTLRAL----VSTKDAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVTGAVD 83
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ V AY + L + + + + S ++L+I
Sbjct: 84 S----------------------VAKAYALIIAQLVEANPASPSVSSSSGSHTSIRLLIS 121
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
G++IG+ G KIK I+D SGA + + DMLP STER+V V G+P++I +AI +I
Sbjct: 122 HNLMGTIIGRNGLKIKAIQDGSGARMVASKDMLPQSTERVVDVQGSPESIGRAIEEIGRC 181
Query: 192 LIECTLQVVKGAVIPYEPKTMN---AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
L+E + + G V+ Y P + G + +G +A+ G Y +G++
Sbjct: 182 LLEDWERGL-GTVL-YHPGVADERSGGSMGGAGRRAHNYSGSY-------SGRRSN---- 228
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
G ST T + I + D+ GC+IG+ G+
Sbjct: 229 -------AGEMSTRATSPPSPESPSQAA---------NLRTQNISIPSDMVGCIIGRGGT 272
Query: 309 RLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 273 KITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFLLYNQLESEK 324
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 171/390 (43%), Gaps = 56/390 (14%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--AC 59
D + + D + M CL V S ++G G + R++ E+ A+I+I++
Sbjct: 56 DHDSPDNVPSDVHLRMLCL------VKHASLIVGHKGATISRIKSETSARINISNNIRGV 109
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIV V G+ D+ V AY + R+L + H N + E+
Sbjct: 110 PERIVYVRGTCDD----------------------VAKAYGMIVRALLEEHGNEDNGEDI 147
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ + L+IP G +IGK G ++++I DLS A + + + L +S +RI+T++G PD
Sbjct: 148 E---ISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPD 204
Query: 180 TISQAIYQICLVLIECTLQVVKGAV---IPYEPKTMNAGPVILSGGQAYTL----HGEYA 232
I A + I L+ ++ + V I Y+P N+ V++ Q T+ + +Y
Sbjct: 205 AIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS--VLIDHSQPNTIFHQRNHQYH 262
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV-------------KSG 279
+ ++ K + +L + T+ + A A + V +
Sbjct: 263 PSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAP 322
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G +FV+ EI + + G VIGK G + +++ +G I I E S ++ I+G
Sbjct: 323 GNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG 382
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
A A LI+ IE+ ++N +P
Sbjct: 383 TFMASQAAIMLISNKIEIDRSNAERKRRSP 412
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/374 (26%), Positives = 156/374 (41%), Gaps = 67/374 (17%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DR 62
DG E+ + + V E +IG G V LR ++G + ++ P DR
Sbjct: 5 DGPRTEEEYAQAQITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSK-VVPGVHDR 63
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G + TG + AY + L + N
Sbjct: 64 VLTVTGPL---------TG-------------ISEAYGLVADGLVKGAPQMGMGGVVANP 101
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV + G PD
Sbjct: 102 NTHPI--RLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEIQGTPD 159
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
+ +A+++I LI+ Q + Y P A + G P
Sbjct: 160 GVQKAVWEIGKCLIDD--QERGYGTVLYSP--------------AVRVQGAAPTPAMNGT 203
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT--------GDDFVETE 291
G P G G+ + + A R +G DT G+D
Sbjct: 204 GYGAPR--------GYNRTGNGADFTGSGAPY--QRRSTGPSDTGPPPAVEDGEDIQTQN 253
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+ GS++ EIR+ SGA+I+I ++ ++MF I G Q A A YL
Sbjct: 254 ISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDDTGERMFTITGGQTANEKALYL 313
Query: 350 INMCIELQKNNTTN 363
+ +E +K +N
Sbjct: 314 LYENLEAEKMRRSN 327
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 162/367 (44%), Gaps = 61/367 (16%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G
Sbjct: 40 SMLTLRAIVSS----KEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTG-- 93
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
P H AY + + L + + N P+ +
Sbjct: 94 ------------PLH--------GTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPV--R 131
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 132 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 191
Query: 188 ICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
I LI+ Q G ++ Y P ++ +G + G Y G +
Sbjct: 192 IGKCLID-DWQRGTGTIL-YNPAVRASVGSGSTNTNMGNGY--------------GSRPY 235
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
+ A + G +S + A R +D GD+ I + D+ GC+IG
Sbjct: 236 NRTGNGADFSDQSGGYSSRRSNSDAG----RFPMVAED-GDEIQTQNISIPADMVGCIIG 290
Query: 305 KAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTT 362
+AGS++ EIR+ SGA+I+I E+ ++MF I G A A YL+ +E +K T
Sbjct: 291 RAGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEK--TR 348
Query: 363 NTSDNPE 369
+ PE
Sbjct: 349 RSQQPPE 355
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
E + L L+ ++ + G +IGK G + D+RD +G V S ++P +R++TV G
Sbjct: 35 EEYAQSMLTLRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGV-SKVVPGVHDRVLTVTG 93
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVI 205
++A + L+E Q+ G ++
Sbjct: 94 PLHGTARAYALVAKGLLEGAPQMGMGGIV 122
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 79/311 (25%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+MR L + + S +IG G V +R++SGA+++I++ P+RI+ V G++D
Sbjct: 88 ISMRAL----IVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALDA 143
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 144 ----------------------VSKAFGLIVRRINDEPFDVASVPGS--RAVTIKFIIPN 179
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IG+GG KIK+I+D SGA + + MLP STERI++V G D I A+Y I +L
Sbjct: 180 SRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADAIHIAVYYIGTIL 239
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
+E Y+ + N GP ++ G Y ++QP +A
Sbjct: 240 LE------------YQER--NPGP--------HSGIGTY---------RQQPQGMA---- 264
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
AA + +G +GG + +I + + + G +IGKAGS++ E
Sbjct: 265 -------------AAQPSFTGVAPGAGGASAPGSQTQ-QIFIPNSLVGAIIGKAGSKINE 310
Query: 313 IRQISGAQINI 323
IR S QI +
Sbjct: 311 IRAQSQCQIRV 321
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 20/102 (19%)
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
P +A++ GSR V + ++ + G VIG+ GS++ EI+ SGA++N
Sbjct: 159 PFDVASVPGSRA-----------VTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLN-- 205
Query: 325 TGTE-----SHKKMFHIQGCQEAVSLAQYLI-NMCIELQKNN 360
+E S +++ + G +A+ +A Y I + +E Q+ N
Sbjct: 206 -ASEVMLPGSTERILSVSGVADAIHIAVYYIGTILLEYQERN 246
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 171/390 (43%), Gaps = 56/390 (14%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--AC 59
D + + D + M CL V S ++G G + R++ E+ A+I+I++
Sbjct: 56 DHDSPDNVPSDVHLRMLCL------VKHASLIVGHKGATISRIKSETSARINISNNIRGV 109
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIV V G+ D+ V AY + R+L + H N + E+
Sbjct: 110 PERIVYVRGTCDD----------------------VAKAYGMIVRALLEEHGNEDNGEDI 147
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ + L+IP G +IGK G ++++I DLS A + + + L +S +RI+T++G PD
Sbjct: 148 E---ISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPD 204
Query: 180 TISQAIYQICLVLIECTLQVVKGAV---IPYEPKTMNAGPVILSGGQAYTL----HGEYA 232
I A + I L+ ++ + V I Y+P N+ V++ Q T+ + +Y
Sbjct: 205 AIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS--VLIDHSQPNTIFHQRNHQYH 262
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV-------------KSG 279
+ ++ K + +L + T+ + A A + V +
Sbjct: 263 PSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAP 322
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G +FV+ EI + + G VIGK G + +++ +G I I E S ++ I+G
Sbjct: 323 GNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG 382
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
A A LI+ IE+ ++N +P
Sbjct: 383 TFMASQAAIMLISNKIEIDRSNAERKRRSP 412
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 165/383 (43%), Gaps = 94/383 (24%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ +++T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 38 KTDEEYAQSMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDR 93
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
++TV+G + +S AY+ + +SL + +PQ
Sbjct: 94 VLTVTGPLQGTSK----------------------AYSIVAKSLLE----------GAPQ 121
Query: 123 -----------PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
++L+I G++IG+ G KIK I+D SG + +MLP STERI
Sbjct: 122 MGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERI 181
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLH 228
V V G P+ I +AI++I LI+ Q G V+ Y P ++ +GP S + +
Sbjct: 182 VEVQGTPEGIEKAIWEIGKCLID-DWQRGTGTVL-YNPAVRASVGSGPGQASAAGSNPSY 239
Query: 229 GEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT----- 283
G G + + G A + GS + G D
Sbjct: 240 G----------GNSRSYNRTG--------------NGADFSDHPGSYGRRGNNDNPNRGI 275
Query: 284 ------GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFH 335
G++ I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF
Sbjct: 276 PLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFT 335
Query: 336 IQGCQEAVSLAQYLINMCIELQK 358
I G +A A YL+ +E +K
Sbjct: 336 IMGSAQANEKALYLLYENLEAEK 358
>gi|302655788|ref|XP_003019678.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
gi|291183415|gb|EFE39033.1| hypothetical protein TRV_06307 [Trichophyton verrucosum HKI 0517]
Length = 483
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 163/390 (41%), Gaps = 86/390 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + +R + S+ E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 126 DETGWVHIRAVISSA----EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 180
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 181 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 216
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVILGVADAVHIATY 276
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQA- 224
+ + L+E + G V+PY P+ +GGQ
Sbjct: 277 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP--------AGGQYG 328
Query: 225 -------------YTLHGEYAVPVQEVAGKKQPHPLAGLAV-----LGIEGIGSTSLTP- 265
G Y VP + P L G G G P
Sbjct: 329 HPDSLRRNNPQANRAAPGGYGVPYMQQPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPY 388
Query: 266 AALAALSGSRVKSGGKDTG----DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
A L G V G G + +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 389 GAPQPLHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 448
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I+ + S++++ I G QE +A Y++
Sbjct: 449 KINEPQDNSNERLVTITGTQECNQMALYML 478
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 165/390 (42%), Gaps = 86/390 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 132 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 186
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 187 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 222
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLVILGVADAVHIATY 282
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 283 YVAVTLVEQLTERFGGPAASAYATRSGGAAGVVPGGMQVVPYVPQP--------AGGQYG 334
Query: 224 ---AYTLH----------GEYAVP-VQEVAGKKQ-PHP---LAGLAVLGIEGIGSTSLTP 265
+ H G Y VP V G+ Q PH + G G G P
Sbjct: 335 HPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAP 394
Query: 266 AALAALS----GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
+ G + G V +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 395 YGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVI 454
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I+ + S++++ I G E +A Y++
Sbjct: 455 KINEPQDNSNERLVTITGTPECNQMALYML 484
>gi|296812925|ref|XP_002846800.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
gi|238842056|gb|EEQ31718.1| KH domain RNA binding protein [Arthroderma otae CBS 113480]
Length = 477
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 159/390 (40%), Gaps = 96/390 (24%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
DE + +R + S+ E + +IG GG V ++R+ SGAK +++D
Sbjct: 126 DETGWVHIRAVISSA----EAATVIGKGGENVSQIRRLSGAKCTVSD------------- 168
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+V+ + TA+ + R+L + + PL +L+
Sbjct: 169 -----------------YSRGAVERILTAFGLIIRTLNNEPLEAPSTAQSKTYPL--RLL 209
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y +
Sbjct: 210 IPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVILGVADAVHIATYYVA 269
Query: 190 LVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQA---- 224
+ L+E + G V+PY P+ +GGQ
Sbjct: 270 VTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP--------AGGQYGHPD 321
Query: 225 ----------YTLHGEYAVPVQEVAGKKQPHPLAGLAVL--------GIEGIGSTSLTP- 265
G Y VP + G PHP A L G G G P
Sbjct: 322 SLRRNNPQANRATPGGYGVPYMQQPG---PHPHAPQPSLHYGASPRQGYTGAGPHQPAPY 378
Query: 266 AALAALSGSRVKSGGKDTG----DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
A G V G G + +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 379 GAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 438
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I+ + S++++ I G QE +A Y++
Sbjct: 439 KINEPQDNSNERLVTITGTQECNQMALYML 468
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 167/399 (41%), Gaps = 74/399 (18%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--AC 59
D + + D + M CL V S ++G G + R++ E+ A+I+I++
Sbjct: 56 DHDSPDNVPSDVHLRMLCL------VKHASLIVGHKGATISRIKSETSARINISNNIRGV 109
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIV V G+ D+ V AY + R+L + H N + E+
Sbjct: 110 PERIVYVRGTCDD----------------------VAKAYGMIVRALLEEHGNEDNGEDI 147
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ + L+IP G +IGK G ++++I DLS A + + + L +S +RI+T++G PD
Sbjct: 148 E---ISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPD 204
Query: 180 TISQAIYQICLVLIECTLQVVKGAV---IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQ 236
I A + I L+ ++ + V I Y+P N+ V++ Q T+ +
Sbjct: 205 AIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS--VLIDHSQPNTIFHQR----- 257
Query: 237 EVAGKKQPHPLAGLAVLGIEG---IGSTSLTPAA----------------------LAAL 271
Q HP L I ST L+ A + L
Sbjct: 258 ----NHQYHPSDKLLSYKPNKNLPISSTXLSMATPQYTTASVANATAFQPNFVIPNVTVL 313
Query: 272 SGSRVKSG-GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-S 329
G + G +FV+ EI + + G VIGK G + +++ +G I I E S
Sbjct: 314 DGPVISPAPGNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGS 373
Query: 330 HKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
++ I+G A A LI+ IE+ ++N +P
Sbjct: 374 SERRLTIRGTFMASQAAIMLISNKIEIDRSNAERKRRSP 412
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 173/395 (43%), Gaps = 82/395 (20%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACP 60
N + ++DE + +R +S E + +IG GG V ++R+ SGAK +++D GA
Sbjct: 119 NHNQQVDETNWLHVRACIGTS----EAATIIGKGGENVTQIRRLSGAKCTVSDYSRGAV- 173
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMEN 118
+RI+TVSG VD V A+ + R+L ED
Sbjct: 174 ERILTVSGQVDA----------------------VSKAFGLIVRTLNQEDLETPSTSTSK 211
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P ++L+IP GS+IGK G +I++I++ S A + + +LP S ER + V G
Sbjct: 212 AYP----MRLLIPHILIGSIIGKAGIRIREIQEASNAKLNASDTLLPNSGERSLIVLGVA 267
Query: 179 DTISQAIYQICLVLIECTLQVVKG-AVIPYE----------PKTMNAGPVI--LSGGQAY 225
D + A+Y + L+E + G A Y P M+ P + +GGQ Y
Sbjct: 268 DAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGGQ-Y 326
Query: 226 T---------------LHGEYAVPVQEVAGKKQP---HPL----AGLAVLGIEGIGSTSL 263
+ HG Y P +Q HP AG G G G +
Sbjct: 327 SHPQNFRRQEPPQRTPAHGGYGAPHMHGQPPQQSPYGHPNMPYGAGSPSRGPYG-GPAAP 385
Query: 264 TPAALAALSGSRVKSG-------GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
TP + G G G + +I + +D+ G +IGK G+++ EIRQ+
Sbjct: 386 TPYGAHPAAAPVAHGGAAPHAAVGAMPGQPLTQ-QIFIPNDMVGAIIGKGGAKINEIRQL 444
Query: 317 SGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
SG+ I I+ T+ S++++ I G QE +A Y++
Sbjct: 445 SGSVIKINEPTDNSNERLVTITGTQECNQMALYML 479
>gi|296418898|ref|XP_002839062.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635056|emb|CAZ83253.1| unnamed protein product [Tuber melanosporum]
Length = 354
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 170/399 (42%), Gaps = 103/399 (25%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTVSGSVDNS 73
MR + S+ E + +IG GG V ++R+ + AK +++D GA +RI+TVSG+VD
Sbjct: 1 MRAVITSA----EAATVIGKGGENVTQIRRMAEAKCTVSDYQRGAG-ERILTVSGAVDA- 54
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP--LQLKLVIP 131
V A+ + R+L N E SPQ L+L++P
Sbjct: 55 ---------------------VAKAFGLIIRTLN----NEPLEEASSPQSKTYPLRLLVP 89
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
GS+IGK G +I++I++ SGA + + LP+STER + V G D + A Y I
Sbjct: 90 HILIGSIIGKSGGRIREIQEASGARLNASGSCLPLSTERSLVVLGVADAVHIATYYIANT 149
Query: 192 LIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAYTLHGE 230
L+E + G V+PY+P+ LHG
Sbjct: 150 LVEQLTERFGGPAASAYATRSGGPAGPMPGGMQVVPYQPQ---------------PLHGS 194
Query: 231 YAVP--VQEVAGKKQPHPLAGLAVLGIEGIGSTSLT--------PAALAALSGSRVKSGG 280
Y P + Q P + + G + P A +A SG+ G
Sbjct: 195 YGNPDTYKRHNNNAQRTPNNPYGIPYLHGPAPAPVPQAPIHYADPQAASAYSGAGPHQPG 254
Query: 281 KD-------------------TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
+ G + +I + +D+ G +IGK G+++ EIRQ+SG+ I
Sbjct: 255 QAGAGPTPQQGPAPNPMANMLPGQPLTQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGSVI 313
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
I+ + S++++ I G QE +A Y++ +E +K+
Sbjct: 314 KINEPQDNSNERLVTITGTQECNQMALYMLYSRLESEKH 352
>gi|443924046|gb|ELU43123.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 386
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 176/372 (47%), Gaps = 57/372 (15%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVS 67
D DTL T+R L V E +IG GG V LR+++G K ++ +R+++VS
Sbjct: 38 DSDTL-TLRAL----VTTKEAGVIIGKGGKNVADLREQTGVKAGVSKVVQGVNERVLSVS 92
Query: 68 GSVDNSSTSSVETGYPG-----HTLWVTSV-DNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G+V++ + + P +TL +T + + ++ H +
Sbjct: 93 GTVEDVAKARYSLHRPAILHFAYTLIITQLLQSAPSSPGAPPPPPSSTHTS--------- 143
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
L+L+I G++IG+GG KIK I+D SGA + + +MLP STER+V V G+ ++I
Sbjct: 144 ----LRLLISHNLMGTIIGRGGLKIKAIQDNSGARMVASKEMLPQSTERVVEVQGSSESI 199
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV--- 238
+AI +I L+E + + G V+ + A P L G A G +A
Sbjct: 200 GRAIAEIGRCLLEDWERGL-GTVLYHPGPGTGADP--LGGTGARRNSGAFAPSTSTTPRR 256
Query: 239 ---------AGKKQPHPLAGLA-VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
+G ++G++ V+G S S P+ + R ++
Sbjct: 257 ISSAADNVYSGASNRRSVSGISQVVGNNSPPSRSPPPSQTPPAAALRTQN---------- 306
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLA 346
I + D+ GC+IG+AGS++ EIR++SG++I+I E+ ++MF I G +A A
Sbjct: 307 ---ISIPSDMVGCIIGRAGSKITEIRRLSGSKISIAKTPHDETGERMFTIVGTPDANEKA 363
Query: 347 QYLINMCIELQK 358
+L+ +E +K
Sbjct: 364 LFLLYNQLESEK 375
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 164/389 (42%), Gaps = 89/389 (22%)
Query: 1 MDGNGD--GKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISIT 55
MDG G+ + +E+ +T+R + V+ E +IG G V LR E+G + ++
Sbjct: 26 MDGEGEVIPRTEEEYAEAQLTLRAI----VSSKEAGVIIGKAGKNVADLRDETGVRAGVS 81
Query: 56 D--GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR 113
DR+++V+GS+ + AY + L +
Sbjct: 82 KVVQGVHDRVLSVTGSLSG----------------------ISKAYGLAAKGLLEGAPAM 119
Query: 114 N-----RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST 168
R + P ++L+I G++IG+ G KIK I+D SG + +MLP ST
Sbjct: 120 GMGGVIRTDGTHP----IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQST 175
Query: 169 ERIVTVHGNPDTISQAIYQI--CL----------VLIECTLQVVKGAVIPYEPKTMNAGP 216
ER+V V G+P I +A+++I CL VL ++V G V P + P
Sbjct: 176 ERVVEVQGSPAGIEKAVWEIGKCLIDDHERGYGTVLYNPAVRVQPG-VGPGPAANGGSAP 234
Query: 217 VILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
GG++Y G A S +P A + SGS
Sbjct: 235 AGGMGGRSYNRTGHGA---------------------------DFSDSPPAFSRRSGSDA 267
Query: 277 KSGGK-----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TES 329
S + G++ I + D+ GC+IG+ GS++ EIR+ S A+I+I ++
Sbjct: 268 ASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKAPHDDT 327
Query: 330 HKKMFHIQGCQEAVSLAQYLINMCIELQK 358
++MF I G A A YL+ +E +K
Sbjct: 328 GERMFTITGSASANEKALYLLYENLEAEK 356
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 86/149 (57%), Gaps = 27/149 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 26 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 75
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
P + ++ A+ + L ED + S P+ L+LV+PA+
Sbjct: 76 --------PTNAIF--------KAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 119
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASD 162
CGSLIGKGGCKIK+IR+ +GA VQVA D
Sbjct: 120 QCGSLIGKGGCKIKEIRESTGAQVQVAGD 148
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L ++L++ GS+IGK G +K +R+ SGA + ++ P ERI+T+ G + I +
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCP---ERIITLAGPTNAIFK 82
Query: 184 AIYQI 188
A I
Sbjct: 83 AFAMI 87
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 162/367 (44%), Gaps = 78/367 (21%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + V+ E +IG G V LR E+G K ++ DR++TV+G++
Sbjct: 225 SMLTLRAI----VSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGAL 280
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + + L + + N P+ +
Sbjct: 281 SGT----------------------ARAYALVAKGLLEGAPQMGMGGIVSNNGTHPI--R 316
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +AI++
Sbjct: 317 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWE 376
Query: 188 ICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
I LI+ Q G ++ Y P ++ +G + +GG + + + +P
Sbjct: 377 IGKCLID-DWQRGTGTIL-YNPAVRSSVGSGSIQHNGGNSDSYN-------------SRP 421
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT-----------GDDFVETEIV 293
+ G A + SG + DT G++ I
Sbjct: 422 YNRTG--------------NGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNIS 467
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLIN 351
+ D+ GC+IG+ G+++ EIR+ SGA+I+I E+ ++MF I G +A A YL+
Sbjct: 468 IPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLY 527
Query: 352 MCIELQK 358
+E +K
Sbjct: 528 ENLEAEK 534
>gi|440636503|gb|ELR06422.1| hypothetical protein GMDG_02138 [Geomyces destructans 20631-21]
Length = 365
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 159/372 (42%), Gaps = 63/372 (16%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GAC 59
DG K +ED I L + V+ E +IG G V LR E+G K ++
Sbjct: 32 DGEPAPKTEEDYAIAQLTL-RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGV 90
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---M 116
DRI+T++G D + AY + ++L + +
Sbjct: 91 HDRILTITGGCDA----------------------ISKAYAIVAKALLEGAPMMGMGGLV 128
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
P+ KL+I G++IG+ G KIK I+D SG + +MLP STERIV V G
Sbjct: 129 STTGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQG 186
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEP----KTMNAGPVILSGGQAYTLHGEYA 232
P+ I +AI+++C LI+ + G V+ Y P +T I + G+ EY+
Sbjct: 187 TPEGIQKAIWEMCKCLID-DWERGTGTVL-YNPVVRTQTGGGQGGIRNEGR------EYS 238
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG----KDTGDDFV 288
P G G + P S G + G++
Sbjct: 239 SPRVMRTGN---------------GADFSQEAPRTFNRRSDGETAGRGVPTHDENGEEIQ 283
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLA 346
I + D+ GC+IG+ GS++ EIR+ SGA+I+I ++ ++MF I G +A A
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGSAKANETA 343
Query: 347 QYLINMCIELQK 358
YL+ +E +K
Sbjct: 344 LYLLYENLEGEK 355
>gi|315055291|ref|XP_003177020.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
gi|311338866|gb|EFQ98068.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
Length = 367
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 164/375 (43%), Gaps = 91/375 (24%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 46 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 101
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-------- 122
+S AY+ + +SL + +PQ
Sbjct: 102 QGTSK----------------------AYSIVAKSLLE----------GAPQMGMGGVVQ 129
Query: 123 ---PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 130 NNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 189
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLHGEYAVPVQ 236
I +AI++I LI+ Q G V+ Y P ++ +GP GQ
Sbjct: 190 GIEKAIWEIGKCLID-DWQRGTGTVL-YNPAVRASVGSGP-----GQG------------ 230
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT-----------GD 285
VAG +P G + G+ A + GS + G D G+
Sbjct: 231 PVAGS---NPSYGGSSRSYNRTGNG----ADFSDHPGSYNRRGNNDNPNRGIPLVTEDGE 283
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAV 343
+ I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF I G +A
Sbjct: 284 EVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQAN 343
Query: 344 SLAQYLINMCIELQK 358
A YL+ +E +K
Sbjct: 344 EKALYLLYENLEAEK 358
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 161/374 (43%), Gaps = 76/374 (20%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ + +T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 34 KTDEEYAQSTLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDR 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G + + AY + + L + N
Sbjct: 90 VLTVTGPLQGT----------------------AKAYAIVAKGLLEGAPQLGMGGVASNN 127
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 128 GTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILS----------GGQAYT 226
I +A+++I LI+ Q G V+ Y P ++ GP+ S GG++Y
Sbjct: 186 GIEKAVWEIGKCLID-DWQRGTGTVL-YNPAVRASVGGGPLNNSLGSGASTGGYGGRSYN 243
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDD 286
G A + G + + A GI + + G++
Sbjct: 244 RTGNGADFSDQTGGYNR-RSNSDAASRGIPLV----------------------TEDGEE 280
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVS 344
I + D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G A
Sbjct: 281 VQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANE 340
Query: 345 LAQYLINMCIELQK 358
A YL+ +E +K
Sbjct: 341 KALYLLYENLEAEK 354
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 157/351 (44%), Gaps = 49/351 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T+R + S E +IG G V LR ++G + ++ P DR++TV+G++
Sbjct: 41 LTLRAIVTS----KEAGVIIGKAGQNVADLRDKTGVRAGVSK-VVPGVHDRVLTVTGAL- 94
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--SPQPLQLKLV 129
TG + AY + SL + + M +P ++L+
Sbjct: 95 --------TG-------------ISDAYGLVADSLVK-GVPQMGMGGVVGNPNTHPIRLL 132
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ + +A+++I
Sbjct: 133 ISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGVQKAVWEIG 192
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
LI+ Q G V+ Y P + G A L+G A G + + G
Sbjct: 193 KCLIDDE-QRGYGTVL-YSPAVR-----VQGGAPAPPLNGTGA-----SYGAPRSYNRTG 240
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
G +S P G + G+D I + D+ GC+IG+ GS+
Sbjct: 241 NGADFTGGQSPSSYPPRRNGPSDGGPPPR--PEDGEDIQTQNISIPADMVGCIIGRGGSK 298
Query: 310 LLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ EIR+ SGA+I+I E+ ++MF I G A A YL+ +E +K
Sbjct: 299 ISEIRKSSGARISIAKAPHDETGERMFTITGGPAANEKALYLLYENLEAEK 349
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 165/381 (43%), Gaps = 78/381 (20%)
Query: 3 GNGDG--KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD- 56
G DG K +E+ + +T+R + S E +IG G V LR E+G K ++
Sbjct: 27 GEADGPPKTEEEYAQSTLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKV 82
Query: 57 -GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR 115
DR++TV+G + + AY + + L +
Sbjct: 83 VQGVHDRVLTVTGPLQGT----------------------AKAYAIVAKGLLEGAPQLGM 120
Query: 116 ---MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIV 172
+ N P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV
Sbjct: 121 GGVVSNTGTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIV 178
Query: 173 TVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILS--------- 220
V G P+ I +A+++I LI+ Q G V+ Y P ++ GP+ S
Sbjct: 179 EVQGTPEGIEKAVWEIGKCLID-DWQRGTGTVL-YNPAVRASVGGGPMNNSLGSGTAAGG 236
Query: 221 -GGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
GG++Y G A + G + + A GI +
Sbjct: 237 YGGRSYNRTGNGADFSDQTGGYNR-RSNSDAANRGIPLV--------------------- 274
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQ 337
+ G++ I + D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I
Sbjct: 275 -TEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKAPHDETGERMFTIM 333
Query: 338 GCQEAVSLAQYLINMCIELQK 358
G A A YL+ +E +K
Sbjct: 334 GSAAANEKALYLLYENLEAEK 354
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 161/363 (44%), Gaps = 67/363 (18%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
GD + T I+MR L +S + S +IG G + +R +S A+++I++ P+R
Sbjct: 537 GDSSETQATQISMRTLIVTS----DASIIIGKSGKHINEIRDKSNARLNISEIIPGNPER 592
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
I+TVSG +D V A+ + R + D + + +
Sbjct: 593 ILTVSGPLDA----------------------VSKAFGLIVRRINDEPFDLASVPGS--K 628
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
+ ++ ++P + GS+IGK G KIK+I++ SGA + MLP STER++++ G D +
Sbjct: 629 SVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGVADAVH 688
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
A+Y + +L+E + +PY P GP +G YA P +
Sbjct: 689 IAVYYVGSILLEHPDRNANN--LPYRPTA--GGPSTRAGAAGAN---PYAAP-------Q 734
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
QP G G+ + A GS+ + +I + +D+ GC+
Sbjct: 735 QPF---GYGAPAAGFGGAPAGAGGAPQLPPGSQTQ-------------QIFIPNDLVGCI 778
Query: 303 IGKAGSRLLEIRQISGAQINI-------HTGTESHKKMFHIQGCQEAVSLAQYLINMCIE 355
IGK GS++ EIR +S + I I G ++++ I G + +A L+ +E
Sbjct: 779 IGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPPNIQMAVSLLYQRLE 838
Query: 356 LQK 358
+K
Sbjct: 839 QEK 841
>gi|406866225|gb|EKD19265.1| KH domain RNA binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 545
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 166/393 (42%), Gaps = 83/393 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 115 DESGWIHIRAVITSA----EAATVIGKGGENVSSIRKMSGAKCTVSDYQKGAV-ERILTV 169
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + + PL
Sbjct: 170 SGVVDAA----------------------AKAFGLIIRTLNNEPLEAPSSAQSKTYPL-- 205
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 206 RLLIPHILIGSIIGKGGVRIREIQEASGARLNASDSCLPLSTERSLVVLGVADAVHIATY 265
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQAY 225
+ L E + G V+PY P+ G +
Sbjct: 266 YVGSTLFEQLSERFGGPAASAYASRSGGPAGVVPGGMQVVPYVPQPAGGN----FGHPDH 321
Query: 226 TLHGE--YAVPVQEVAGKKQPHP---------------LAGLAVL--GIEGIGSTSLTPA 266
H E + P Q G QP+ G V+ G G G A
Sbjct: 322 RRHQERPHQTPSQ---GYNQPYSGHGQPQPQQPGNPMHYGGSPVVQGGYGGTGPQQPHQA 378
Query: 267 ALAAL---SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ +G GG + +I + +D+ G +IGK G+++ EIRQ+SG+ I I
Sbjct: 379 HMGGPGPHAGPIPPQGGPVVPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI 438
Query: 324 HTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
+ + S++++ I G E +A Y++ +E
Sbjct: 439 NEPQDNSNERLVTITGTAECNQMALYMLYSRLE 471
>gi|403418461|emb|CCM05161.1| predicted protein [Fibroporia radiculosa]
Length = 326
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 160/353 (45%), Gaps = 74/353 (20%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
DTL T+R L V+ + +IG G V LR +G K ++ P +R++TVSG
Sbjct: 26 DTL-TLRAL----VSTKDAGVIIGKAGKNVADLRDHTGVKAGVSK-VVPGVHERVLTVSG 79
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
SV+ V AY + L + + N P ++L
Sbjct: 80 SVEG----------------------VAKAYALIVSQLVSANPSSPVSPNSPPPNTAIRL 117
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I GS+IG+ G KIK I+D SGA + + DMLP STERIV V G+ ++I +AI +I
Sbjct: 118 LISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGSSESIGRAIEEI 177
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
L+E +E G V+ G E +G++ + A
Sbjct: 178 GRCLLE-----------DWE---RGQGTVLFHPGSG-----------DERSGRRSSN--A 210
Query: 249 GLAVLGIEGIGSTSLTP-AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
G G G TS +P A L + R ++ I + D+ GC+IG+ G
Sbjct: 211 SRRYNGDAGRGRTSPSPNAPLQQPTNLRTQN-------------ISIPSDMVGCIIGRNG 257
Query: 308 SRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 258 TKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALFLLYNQLESEK 310
>gi|358055492|dbj|GAA98612.1| hypothetical protein E5Q_05299 [Mixia osmundae IAM 14324]
Length = 549
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 166/392 (42%), Gaps = 79/392 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDN 72
+T+R L + + S +IG GG ++ +R+++G K+ +++ P+RI+ VSG +D
Sbjct: 188 VTLRAL----IVTQDASIIIGKGGQSIKEIREKAGVKVLVSESIPNNPERILNVSGLLDG 243
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + ++ ++P
Sbjct: 244 ----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIRFIVPN 279
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
GS+IGK G KIK+I+D SGA +Q MLP STERI+++ G D I A+Y +L
Sbjct: 280 HRMGSIIGKQGAKIKEIQDASGARLQATESMLPGSTERILSISGVADAIHIAVYYTGAIL 339
Query: 193 IECTLQVVKGAVIPYEP---------KTMNAGPVILSGG---QAYTLHGEY--AVPVQEV 238
E + + V PY P G +GG A H Y A P+
Sbjct: 340 AEHSDRAVNN--TPYRPGLPPTSYGPPPPRPGSGPSAGGYYPPAPPHHDPYRVAAPMVNP 397
Query: 239 AGKKQPH------------------PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG 280
G P+ P A ++G+ P A A + S + G
Sbjct: 398 TGYHDPYRGMGGPPAAMAPPQHGQAPQQHFAAPPVQGM------PPAQAQATTSAMPFGP 451
Query: 281 KDTGDDFV----ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-----SHK 331
V ++ + +++ G +IGK G ++ E+R SGA I I +E + +
Sbjct: 452 PPVATGPVGPNQTQQVYIPNELVGPIIGKGGLKINELRNNSGAHIKIMEPSEGGLNPNGE 511
Query: 332 KMFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
++ ++ G + +A ++ +E +K N N
Sbjct: 512 RLVNVSGQPANIQMAVQMLYQRLEQEKANKMN 543
>gi|440469758|gb|ELQ38855.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482264|gb|ELQ62771.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 490
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 164/382 (42%), Gaps = 71/382 (18%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ S AK +++D GA +RI+TV
Sbjct: 121 DESAWIHIRAVISSP----EAATIIGKGGENVSKIRQMSSAKCTVSDYQKGAV-ERILTV 175
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + ++ + PL
Sbjct: 176 SGIVDA----------------------VAKAFGLIIRTLNNEPLSEPSSAHSKTYPL-- 211
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+S+ER + V G D + A Y
Sbjct: 212 RLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSSERSLVVMGVADAVHIATY 271
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTM--NAGPVILSGGQ 223
+ L+E G V+PY P+ N G G +
Sbjct: 272 YVGSTLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNYGNRDNYGRR 331
Query: 224 AYTLHGEY------AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVK 277
G+ Q QP+P A G + + PA +G +V
Sbjct: 332 PDPRAGQMPPPAAHPYAPQNPYAPHQPNP-AVPPHYGAQAGAYGAHVPAPHVGHAGPQVH 390
Query: 278 SGGKD--------TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
G + +I + +D+ G +IGK G ++ EIRQ+SG+ I I+ +
Sbjct: 391 GAPHQPMHGQMPGPGGASLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDN 450
Query: 329 SHKKMFHIQGCQEAVSLAQYLI 350
S++++ I G +E +A Y++
Sbjct: 451 SNERLVTITGTEECNRMALYML 472
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 170/397 (42%), Gaps = 88/397 (22%)
Query: 1 MDGNGD--GKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISIT 55
MDG G+ + +E+ +T+R + V+ E +IG G V LR E+G + ++
Sbjct: 26 MDGEGEVVPRTEEEYAEAQLTLRAI----VSSKEAGVIIGKAGKNVADLRDETGVRAGVS 81
Query: 56 D--GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR 113
DR+++V+GS+ + AY + L +
Sbjct: 82 KVVQGVHDRVLSVTGSLSG----------------------ISKAYGLAAKGLLEGAPAM 119
Query: 114 N-----RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST 168
R + P ++L+I G++IG+ G KIK I+D SG + +MLP ST
Sbjct: 120 GMGGVIRTDGTHP----IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQST 175
Query: 169 ERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLH 228
ERIV V G+P I +A+++I LI+ + G V+ Y P
Sbjct: 176 ERIVEVQGSPAGIEKAVWEIGKCLID-DHERGYGTVL-YNP------------------- 214
Query: 229 GEYAVPVQEVAGKKQPHPLA--GLAVLGIEGIGST----------SLTPAALAALSGSRV 276
AV VQ G P P A G A G G G + S +P A + SGS
Sbjct: 215 ---AVRVQPGVG---PGPAANGGSAPAGGMGGGRSYNRTGHGADFSDSPPAFSRRSGSDA 268
Query: 277 KSGGK-----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TES 329
S + G++ I + D+ GC+IG+ GS++ EIR+ S A+I+I ++
Sbjct: 269 ASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKAPHDDT 328
Query: 330 HKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
++MF I G A A YL+ +E +K + +
Sbjct: 329 GERMFTITGSASANEKALYLLYENLEAEKMRRSQAQE 365
>gi|358387038|gb|EHK24633.1| hypothetical protein TRIVIDRAFT_54511 [Trichoderma virens Gv29-8]
Length = 369
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 165/380 (43%), Gaps = 56/380 (14%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 31 DGELAPKTDEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 87 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPAVGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 125 GVIQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQICLVLIE----CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG 229
V G P+ I +AI++I L++ T V+ V+ +P + G
Sbjct: 183 VQGTPEGIQRAIWEISKCLVDDWQRGTGTVLYNPVVRTQPSGSGSLGGSGY---NGGGRG 239
Query: 230 EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
+Y P G A + G S + AA +R + G++
Sbjct: 240 DYGSPRVMRTGNG-----ADFSNGGSRPFSRRSDSDAA------NRGPPTHDENGEEIQT 288
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQ 347
I + D+ GC+IG+ GS++ +IR+ SGA+I+I E+ ++MF I G +A A
Sbjct: 289 QNISIPADMVGCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANESAL 348
Query: 348 YLINMCIELQKNNTTNTSDN 367
+L+ +E +K + D
Sbjct: 349 FLLYENLEAEKMRRSQMQDQ 368
>gi|398389867|ref|XP_003848394.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
gi|339468269|gb|EGP83370.1| hypothetical protein MYCGRDRAFT_111290 [Zymoseptoria tritici
IPO323]
Length = 879
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 165/387 (42%), Gaps = 79/387 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVTV 66
DE + + +R + S+ E + +IG GG V ++RK +GAK ++ T GA +RI+TV
Sbjct: 130 DESSWLHVRAIISSA----EAATVIGKGGENVTQIRKMAGAKCTVSEYTRGAV-ERILTV 184
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L +++ PL
Sbjct: 185 SGLVDA----------------------VAKAFGLIIRTLNQEPLDQPSTPQSKTYPL-- 220
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 221 RLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIATY 280
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPK--------------- 210
+ L+E GA V+PY P+
Sbjct: 281 YVGSTLVEQLTDRFGGAAASNYAGRHGGPQGVVPGGMQVVPYVPQHTGGQMGHPENFRKP 340
Query: 211 -TMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALA 269
+ GQ Y +HG+ P Q AG G G P A A
Sbjct: 341 QGPPQRGPPNAYGQPY-MHGQ--PPQQHPQAAAHYGGGAGSPRAPYVGAGPQQPQPYAHA 397
Query: 270 ALSGSRV-----KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
A S G G + +I + +D+ G +IGK G+++ EIRQ+SG+ I I+
Sbjct: 398 APQASHAGPPQQPMQGMVPGQPITQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKIN 456
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLI 350
+ +++++ I G QE +A Y++
Sbjct: 457 EPQDNNNERLVTITGTQECNQMALYML 483
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 156/364 (42%), Gaps = 57/364 (15%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVD 71
++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 47 VLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGGLQ 102
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLKL 128
AY+ + + L + ++N P+ +L
Sbjct: 103 G----------------------CARAYSIVAKGLLEGAPQVGMGGVVQNNGTHPI--RL 138
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++I
Sbjct: 139 LISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWEI 198
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
LI+ Q G V+ Y P + GG H G +
Sbjct: 199 GKCLID-DWQRGTGTVL-YNPAVR-----VSVGGSGQPSHN----------GDRTGGSYG 241
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK-----DTGDDFVETEIVLTDDIAGCVI 303
G G G+ P+ GS + D G++ I + D+ GC+I
Sbjct: 242 GGRSYNRTGNGADFSEPSGGYNRRGSGDNANRSIPMVTDDGEEVQTQNISIPADMVGCII 301
Query: 304 GKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNT 361
G+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+ +E +K
Sbjct: 302 GRGGSKISEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEKMRR 361
Query: 362 TNTS 365
+ S
Sbjct: 362 SQQS 365
>gi|326469510|gb|EGD93519.1| KH domain RNA binding protein [Trichophyton tonsurans CBS 112818]
gi|326478964|gb|EGE02974.1| KH domain RNA binding protein [Trichophyton equinum CBS 127.97]
Length = 483
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 162/390 (41%), Gaps = 86/390 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + +R + S+ E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 126 DETGWVHIRAVISSA----EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 180
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 181 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 216
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVILGVADAVHIATY 276
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQA- 224
+ + L+E + G V+PY P+ +GGQ
Sbjct: 277 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP--------AGGQYG 328
Query: 225 -------------YTLHGEYAVPVQEVAGKKQPHPLAGLAV-----LGIEGIGSTSLTP- 265
G Y VP + P L G G G P
Sbjct: 329 HPDSLRRNNPQANRAAPGGYGVPYMQQPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPY 388
Query: 266 AALAALSGSRVKSGGKDTG----DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
A G V G G + +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 389 GAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 448
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I+ + S++++ I G QE +A Y++
Sbjct: 449 KINEPQDNSNERLVTITGTQECNQMALYML 478
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 105/403 (26%), Positives = 167/403 (41%), Gaps = 89/403 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ S AK +++D GA +RI+TV
Sbjct: 112 DETSWIHIRAVISSP----EAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAV-ERILTV 166
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + N + L
Sbjct: 167 SGVVDA----------------------VAKAFGLIIRTLNNEPLGE--PSNAHSKTYPL 202
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 203 RLLIPHILIGSIIGKGGSRIKEIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 262
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPK------------TMN 213
+ L+E + G V+PY P+ +
Sbjct: 263 YVGSTLLEQLNERFGGPAASAYAARGGGPVGVVPGGMQVVPYLPQPAGGSYGRTENYSRR 322
Query: 214 AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH--------------PLAGLAVLGIEGIG 259
P Q Y Y P+ G P P A G G
Sbjct: 323 QDPRAQLPPQGYG--APYGAPIAHGPGPAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHG 380
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
+ P A G +G T ++ ++V G +IGK G ++ EIRQ+SG+
Sbjct: 381 PHAGQPPH-AGPGGHPAMAGAPLTQQIYIPNDMV------GAIIGKGGQKINEIRQVSGS 433
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNT 361
I I+ + S++++ I G +E +A Y++ +E +K+ T
Sbjct: 434 VIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLESEKHRT 476
>gi|302509454|ref|XP_003016687.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|327303250|ref|XP_003236317.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
gi|291180257|gb|EFE36042.1| hypothetical protein ARB_04979 [Arthroderma benhamiae CBS 112371]
gi|326461659|gb|EGD87112.1| KH domain RNA binding protein [Trichophyton rubrum CBS 118892]
Length = 483
Score = 98.6 bits (244), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 162/390 (41%), Gaps = 86/390 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + +R + S+ E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 126 DETGWVHIRAVISSA----EAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 180
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 181 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 216
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 217 RLLIPHILIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERSLVILGVADAVHIATY 276
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQA- 224
+ + L+E + G V+PY P+ +GGQ
Sbjct: 277 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQP--------AGGQYG 328
Query: 225 -------------YTLHGEYAVPVQEVAGKKQPHPLAGLAV-----LGIEGIGSTSLTP- 265
G Y VP + P L G G G P
Sbjct: 329 HPDSLRRNNPQANRAAPGGYGVPYMQQPAPHPHAPQPSLHYGASPRTGYTGAGPHQPAPY 388
Query: 266 AALAALSGSRVKSGGKDTG----DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
A G V G G + +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 389 GAPQPPHGGHVPPNGPPMGAAVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVI 448
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I+ + S++++ I G QE +A Y++
Sbjct: 449 KINEPQDNSNERLVTITGTQECNQMALYML 478
>gi|226289821|gb|EEH45305.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 364
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 47/353 (13%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 43 SMLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 98
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + +SL + + N P+ +
Sbjct: 99 QGA----------------------AKAYAIVAKSLLEGAPQLGMGGVVSNNGTHPV--R 134
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 135 LLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 194
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
I LI+ Q G V+ Y P V S G A ++ + +
Sbjct: 195 IGKCLID-DWQRGTGTVL-YNP------AVRASVGGA-PINNSLGSGGSSGGYGGRSYNR 245
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
G + G S + AA G + + + G++ I + D+ GC+IG+ G
Sbjct: 246 TGNGADFSDQTGGYSRRSNSDAANRGIPLVT---EDGEEVQTQNISIPSDMVGCIIGRGG 302
Query: 308 SRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
S++ EIR++SGA+I+I E+ ++MF I G A A YL+ +E +K
Sbjct: 303 SKISEIRRVSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEK 355
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 50/328 (15%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG GG ++RLR E A ++I D P+RIVT+ V +
Sbjct: 119 VIGKGGESIKRLRAECDATLTIPDSQTPERIVTI----------------------VAEI 156
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQ-PLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
DNV N + L++ R+ + S + +L+L++ +H G++IG+GG +IK++R+
Sbjct: 157 DNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELRE 216
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
+ ++V S P STER++ + G P+ I + I +L E +KG PYE
Sbjct: 217 ETSTQLKVYSQCCPQSTERVIQIIGVPEKIIACVILIINMLKEIP---IKGPSRPYESMF 273
Query: 212 MNAGPVILSGG----QAYTLHGEYAVPVQEVAGKKQPH-PLAGLAVLGIEGIGSTSLTPA 266
+ V GG + Y G + P P G + G+G + PA
Sbjct: 274 YDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRFPYGGRGM----GMGVSPFPPA 329
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
+ T++ + +++ G +IGK G R+ IR+ SGA I +
Sbjct: 330 PFGGPMQT---------------TQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQ 374
Query: 327 TESHKKMFHIQGCQEAVSLAQYLINMCI 354
+ +++ I G + AQYL+ C+
Sbjct: 375 QPNSERIITISGSHAQIQTAQYLLQQCV 402
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+L+L++P+ G++IGKGG IK +R A + + P ERIVT+ D + +
Sbjct: 106 ELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP---ERIVTIVAEIDNVIRC 162
Query: 185 IYQICLVLIEC 195
+ +I L EC
Sbjct: 163 VNEIIPRLDEC 173
>gi|328850348|gb|EGF99514.1| hypothetical protein MELLADRAFT_73383 [Melampsora larici-populina
98AG31]
Length = 383
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 170/378 (44%), Gaps = 56/378 (14%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D + +T+R L V+ E +IG GG V +R+++G K ++ DR+++VS
Sbjct: 32 DPTSNVTLRSL----VSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRVLSVS 87
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ----- 122
G ++ V AY+ + + I +N + P
Sbjct: 88 GGLEG----------------------VSKAYSIVADA-----ILQNPLAATDPSLTVPP 120
Query: 123 ----PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
+++++ GS+IG+ G KIK+I+D+SG + + +MLP STER+V V G+P
Sbjct: 121 PTATTTAIRVLVSHNLMGSIIGRQGSKIKEIQDISGVRMVASKEMLPQSTERVVEVQGSP 180
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GGQAYTLHGEYAVPVQ 236
+ I AI++I L+E + G V+ Y+P + V + GG G
Sbjct: 181 EAIRVAIHEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYG 238
Query: 237 EVAGKKQPH--PLAGLAVLGIEGIGSTSLTPAALAALSGSRVK-----SGGKDTGDDFVE 289
++ P G + G + T + +G R + S D +
Sbjct: 239 NGGARRAGSGVPSGGHMAGDLPGRRPHNGTYHSNGNENGHRSRENSLASAPAPVADRLLR 298
Query: 290 TE-IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLA 346
T+ I + D+ GC+IGK G+++ EIR++SG++I+I ++ ++MF I G EA A
Sbjct: 299 TQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITGSSEANEKA 358
Query: 347 QYLINMCIELQKNNTTNT 364
+L+ +E +K T
Sbjct: 359 LFLLYNQLESEKERRVGT 376
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 144/336 (42%), Gaps = 82/336 (24%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG G +R++R ESGA I+++ +RI+ + G TSS
Sbjct: 20 IIGKEGRNIRQMRDESGANINVSGSTGVERILNIKG------TSS--------------- 58
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
V +A + L++ N N P+ L+L++P + CG LIGKGG +IK+IR+
Sbjct: 59 -EVKSAVRMVAEKLQEILSGSN---NEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREA 114
Query: 153 SGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP-YEPKT 211
SGA + + S+ LP S+ER VT+ G+P+ + I +I + E + P P++
Sbjct: 115 SGATITIPSETLPGSSERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRS 174
Query: 212 MNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAAL 271
M PH L+ + S L+ L+
Sbjct: 175 MG------------------------------PHQLS---------VMSGQLSFTGLSRR 195
Query: 272 SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK 331
S E ++ L ++ G +IGK G + EIRQ SGA +++ + ++
Sbjct: 196 S----------------EQKVRLPSNVIGSLIGKGGCHINEIRQFSGATVHVEESKKDNR 239
Query: 332 KM-FHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
I G EAVS A +LIN I + + N +
Sbjct: 240 MSDVIIAGTPEAVSCATFLINARISAGRQASRNRRE 275
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 95/183 (51%), Gaps = 30/183 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 112 IHMRCL----IVTQDASIIIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGPLDA 167
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D ++ + + + +K +IP
Sbjct: 168 ----------------------VSKAFGLIVRRINDEPFDKPSVPGS--RAVTIKFMIPN 203
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 204 SRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADAIHIATYYIGNIL 263
Query: 193 IEC 195
IE
Sbjct: 264 IEA 266
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 90/224 (40%), Gaps = 63/224 (28%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ ++ SGA+++ ++G P +R+++VSG D
Sbjct: 195 VTIKFMIPNS----RMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 250
Query: 72 NSSTSSVETGYPGHTL-----WVTSVDN-----------------------------VCT 97
+ T Y G+ L + S +N V
Sbjct: 251 ---AIHIATYYIGNILIEANERMPSYNNSSYRPSSYSRRPPYSGGGGGGGGGGGSSYVPG 307
Query: 98 AYNFMCRSLEDYHINRNRMENCSPQPLQLK-LVIPATHCGSLIGKGGCKIKDIRDLSGAN 156
A Y + PQ LQ + + IP G +IGKGG KI +IR +S +
Sbjct: 308 AAAGAGAGAGGYSNPYQAPQGGPPQQLQTQQIFIPNDLVGCIIGKGGAKINEIRHMSASQ 367
Query: 157 VQVASDMLPMST---------------ERIVTVHGNPDTISQAI 185
+++ M P +T ER+V + G P I A+
Sbjct: 368 IKI---MEPGATAVGMNGAPAPAGGEGERLVVITGQPANIQMAV 408
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK G+++ EI+ SGA++N G S +++ + G +
Sbjct: 191 GSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 250
Query: 342 AVSLAQYLI-NMCIE 355
A+ +A Y I N+ IE
Sbjct: 251 AIHIATYYIGNILIE 265
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+I + +D+ GC+IGK G+++ EIR +S +QI I
Sbjct: 338 QIFIPNDLVGCIIGKGGAKINEIRHMSASQIKI 370
>gi|225681071|gb|EEH19355.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 495
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 171/403 (42%), Gaps = 92/403 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 132 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 186
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 187 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 222
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLIILGVADAVHIATY 282
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 283 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYIPQP--------AGGQYG 334
Query: 224 ---AYTLH----------GEYAVPVQEVAGKKQPHPLAGL-----AVLGIEGIGSTSLTP 265
+ H G Y VP + P L + G G G P
Sbjct: 335 HPDTFKRHQPQGTRAVSTGGYGVPYVHGQPGQPQMPQQALHYGASSRPGYTGAGPHQ--P 392
Query: 266 AALAALSGSRVKS-------GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
+ A S+V GG G V +I + +D+ G +IGK G+++ EIR +SG
Sbjct: 393 SPYGAPQPSQVHGAPSSQPVGGVVPGAP-VTQQIFIPNDMVGAIIGKGGAKINEIRHLSG 451
Query: 319 AQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+ I I+ + S++++ I G E +A Y++ +E +K+
Sbjct: 452 SVIKINEPQDNSNERLVTITGTPECNQMALYMLYSRLESEKHR 494
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 158/361 (43%), Gaps = 64/361 (17%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGS 69
+++T+R + S E +IG G V LR E+G K ++ P DR++TV+G
Sbjct: 42 SMLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSK-VVPGVHDRVLTVTGP 96
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQL 126
+ + AY + + L + + N P+
Sbjct: 97 LQGT----------------------ARAYALVAKGLLEGAPQMGMGGIVNNNGTHPV-- 132
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A++
Sbjct: 133 RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVW 192
Query: 187 QICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ 243
+I LI+ Q G ++ Y P ++ G I + A + +
Sbjct: 193 EIGKCLID-DWQRGTGTIL-YNPAVRASVGTGSSINTNTTASNGY------------NSR 238
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG----KDTGDDFVETEIVLTDDIA 299
P+ G G + A + S + G + G++ I + D+
Sbjct: 239 PYNRTG------NGADFSDGQSAGYSRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMV 292
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+ +E +
Sbjct: 293 GCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAE 352
Query: 358 K 358
K
Sbjct: 353 K 353
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 108 DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMS 167
D I E + L L+ ++ + G +IGK G + D+RD +G V S ++P
Sbjct: 28 DMDITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVPGV 86
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
+R++TV G ++A + L+E Q+ G ++
Sbjct: 87 HDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGIV 124
>gi|299753134|ref|XP_001833083.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|298410159|gb|EAU88772.2| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 382
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 30/197 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 84 IHMRCL----IVTQDASIIIGKGGAHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 139
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 140 ----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIPN 175
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGK GCKIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 176 SRMGSVIGKAGCKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNIL 235
Query: 193 IECTLQVVKGAVIPYEP 209
IE ++ Y P
Sbjct: 236 IEANERLPSSNGSSYRP 252
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 93/199 (46%), Gaps = 33/199 (16%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
+ + +IG GC ++ ++ SGA+++ ++G P +R+++V+G D + T Y G
Sbjct: 176 SRMGSVIGKAGCKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD---AIHIATYYIG 232
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS------------------PQPLQL 126
+ L + + + + ++ R + + +R + + PQ LQ
Sbjct: 233 NIL-IEANERLPSSNGSSYRPMAGSSASSSRRHHYTGSSYVPGPYPGYPPPHNPPQQLQT 291
Query: 127 K-LVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-----ASDMLPMST-ERIVTVHGNPD 179
+ + IP G +IG+GG KI +IR +S + +++ S P ER+V + GNP
Sbjct: 292 QEIFIPNGLVGCIIGRGGSKINEIRHMSASQIKIMEPGAGSGGRPAPEGERLVVITGNPP 351
Query: 180 TISQAIYQICLVLIECTLQ 198
+ AI Q+ +E Q
Sbjct: 352 NVQMAI-QLLYTRLEQEKQ 369
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGKAG ++ EI+ SGA++N G S +++ + G +
Sbjct: 163 GSRAVTIKFMIPNSRMGSVIGKAGCKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 222
Query: 342 AVSLAQYLI-NMCIE 355
A+ +A Y I N+ IE
Sbjct: 223 AIHIATYYIGNILIE 237
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 155/365 (42%), Gaps = 58/365 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVS 67
+D + + V E +IG G V LR ++G + ++ P DR++TV+
Sbjct: 35 DDEYAQSQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK-VVPGVHDRVLTVT 93
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFM--CRSLEDYHINRNRMENCSPQPLQ 125
G ++ + AY + C + +P
Sbjct: 94 GILNG----------------------IADAYGLVADCLVKGAPQMGIGGSVAAAPNTHP 131
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G PD I +A+
Sbjct: 132 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGTPDGIQKAV 191
Query: 186 YQI--CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ 243
++I CLV E Q G V+ Y P G G A L+G E G
Sbjct: 192 WEIGKCLVDDE---QRGYGTVL-YSPSVRVGG-----GAPAAPLNG-----TGESRGYNA 237
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK--------DTGDDFVETEIVLT 295
P G TS PA+ + GG + G+D I +
Sbjct: 238 PRSYNRTG----NGADFTSGAPASYPPRRNGASEGGGGGSGPPPRVEEGEDIQTQNISIP 293
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMC 353
D+ GC+IG+ GS++ EIR+ SGA+I+I ++ ++MF I G +A A YL+
Sbjct: 294 ADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDDTGERMFTITGGPQANEKALYLLYEN 353
Query: 354 IELQK 358
+E +K
Sbjct: 354 LEQEK 358
>gi|344232044|gb|EGV63923.1| hypothetical protein CANTEDRAFT_104592 [Candida tenuis ATCC 10573]
Length = 408
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 159/361 (44%), Gaps = 64/361 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
+ LI R L S E CLIG G ++ +R+E+ K I+ +RI+TVSG+
Sbjct: 94 NALINYRLLISS----KESGCLIGQSGSVINSIRQETDTKAGISKLLAHTQERILTVSGT 149
Query: 70 VDNSSTSSVETGYPGHTLWVTS---VDNVCTA-YNFMCRSLEDY-HINRNRM---ENCSP 121
+DN S + Y L D TA M S+E+Y H ++ +N +
Sbjct: 150 LDNCSKA---ISYFSQALIEAQQHEADAASTASAGPMPSSVEEYPHFPLRQLSIHKNIAG 206
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN-PDT 180
L+L+IP + G++IG G +I+ I+ + G ++ + LP S ER+V + G+ P+
Sbjct: 207 HSTVLRLLIPNSQMGTIIGAKGARIQRIQQVFGVSMIASKSFLPGSNERLVELQGSVPE- 265
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
+Y V+ C ++ G V G +Y + V VA
Sbjct: 266 ----LYAALRVISRCLIEDFGGVV-----------------GTSYYVPRPRRPDVPVVA- 303
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAG 300
P P++ A G +S +PA L V T + + DI G
Sbjct: 304 ---PLPVSAPAAPGTGPASDSSSSPARL-------------------VTTSMAFSKDIVG 341
Query: 301 CVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
+IGK+GSR+ +R+ISGA I I E S +++F I G AV A+ L+ +E ++
Sbjct: 342 ALIGKSGSRIQGVRKISGAIIGISDELEGSSERIFTISGSTYAVDKAKALLKHNLEREQQ 401
Query: 360 N 360
Sbjct: 402 R 402
>gi|226292229|gb|EEH47649.1| Poly(rC)-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 495
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 169/401 (42%), Gaps = 88/401 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 132 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 186
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 187 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 222
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLIILGVADAVHIATY 282
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 283 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYIPQP--------AGGQYG 334
Query: 224 ---AYTLH----------GEYAVPVQEVAGKKQPHPLAGL-----AVLGIEGIGSTSLTP 265
+ H G Y VP + P L + G G G +P
Sbjct: 335 HPDTFKRHQPQGTRAVSTGGYGVPYVHGQPGQPQMPQQALHYGASSRPGYTGAGPHQPSP 394
Query: 266 AALAALSG-----SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
S S GG G V +I + +D+ G +IGK G+++ EIR +SG+
Sbjct: 395 YGAPQQSQVHGAPSSQPVGGVVPGAP-VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSV 453
Query: 321 INIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
I I+ + S++++ I G E +A Y++ +E +K+
Sbjct: 454 IKINEPQDNSNERLVTITGTPECNQMALYMLYSRLESEKHR 494
>gi|452978145|gb|EME77909.1| hypothetical protein MYCFIDRAFT_63821 [Pseudocercospora fijiensis
CIRAD86]
Length = 480
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 169/392 (43%), Gaps = 91/392 (23%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVTV 66
DE + +R + S+ E + +IG GG V ++R+ +GAK ++ T GA +RI+TV
Sbjct: 112 DESNWLHVRAIISSA----EAATVIGKGGENVTQIRRLAGAKCTVSEYTRGAV-ERILTV 166
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS-PQP-- 123
SG VD V A+ + R+L N+ +E S PQ
Sbjct: 167 SGHVDA----------------------VAKAFGLIIRTL-----NQEPLEQASTPQSKT 199
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L+L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D +
Sbjct: 200 YPLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHI 259
Query: 184 AIYQICLVLIECTLQVVKGA---------------------VIPYEP------------- 209
A Y + L+E G V+PY P
Sbjct: 260 ATYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVVPYVPQNTGGQMGHPDNF 319
Query: 210 -KTMNAGPVILSG--GQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPA 266
K N P + GQ Y +HG+ + G A +G+ P
Sbjct: 320 RKHSNGPPRTPANPYGQPY-MHGQPPQQHPQQPMHY------GAASPRAPYVGAGPQQPQ 372
Query: 267 ALAALSGSRVKSG-------GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
+ S+ +G G G + +I + +D+ G +IGK G+++ EIRQ+SG+
Sbjct: 373 PYGHAAPSQAHAGPPQQPVQGMVPGQPITQ-QIFIPNDMVGAIIGKGGAKINEIRQLSGS 431
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I I+ + +++++ I G QE +A Y++
Sbjct: 432 VIKINEPQDNNNERLVTITGTQECNQMALYML 463
>gi|449303999|gb|EMD00007.1| hypothetical protein BAUCODRAFT_359485 [Baudoinia compniacensis
UAMH 10762]
Length = 471
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 162/373 (43%), Gaps = 91/373 (24%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVTV 66
DE + MR + S+ E + IG GG V ++R+ +GAK ++ T GA +RI+TV
Sbjct: 141 DETGWLHMRAIISSA----EAATTIGKGGENVSQIRRLAGAKCTVSEYTRGAV-ERILTV 195
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP--L 124
SG VD V A+ + R+L + E +PQ
Sbjct: 196 SGHVDA----------------------VAKAFGLIIRTLNQEPLE----EPSTPQSKTY 229
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L+IP GS+IGK G +I++I++ SGA + + LP+STER + V G D + A
Sbjct: 230 PLRLLIPHILIGSIIGKQGVRIREIQEASGARLNASESCLPLSTERSLVVLGVADAVHIA 289
Query: 185 IYQICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ 223
Y + L+E G V+PY P+ +GGQ
Sbjct: 290 TYYVGSTLVEQLTDRFGGPAASNYAGRHGGPQGVVPGGMQVVPYVPQN--------AGGQ 341
Query: 224 -----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS 278
+Y H A P Q + P P G G+ P G
Sbjct: 342 MGHPDSYRKH---APPQQ-----RTPAP-------GPYGMPYMHGQPPQQQPQQGMPGMV 386
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQ 337
G+ + +I + +D+ G +IGK G+++ EIRQ+SG+ I I+ + +++++ I
Sbjct: 387 PGQP-----ITQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNNNERLVTIT 441
Query: 338 GCQEAVSLAQYLI 350
G QE +A Y++
Sbjct: 442 GTQECNQMALYML 454
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 156/367 (42%), Gaps = 77/367 (20%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGS 69
+++T+R + S E +IG G V LR E+G K ++ P DR++TV+G
Sbjct: 36 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSK-VVPGVHDRVLTVTGP 90
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQL 126
+ + AY + + L + + N P+
Sbjct: 91 LQGT----------------------ARAYALVAKGLLEGAPQMGMGGIVNNNGTHPV-- 126
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A++
Sbjct: 127 RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVW 186
Query: 187 QICLVLIECTLQVVKGAVIPYEPK---------TMNAGPVILSGGQAYTLHGEYAVPVQE 237
+I LI+ Q G ++ Y P +MN V G Y+
Sbjct: 187 EIGKCLID-DWQRGTGTIL-YNPAVRASVGGSTSMNTSSV----GNGYS----------- 229
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG----KDTGDDFVETEIV 293
+P+ G G + S + G + G++ I
Sbjct: 230 ----SRPYNRTG------NGADFSDGQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNIS 279
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLIN 351
+ D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+
Sbjct: 280 IPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLY 339
Query: 352 MCIELQK 358
+E +K
Sbjct: 340 ENLEAEK 346
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 108 DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMS 167
D + E + L L+ ++ + G +IGK G + D+RD +G V S ++P
Sbjct: 22 DMEVTPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVPGV 80
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
+R++TV G ++A + L+E Q+ G ++
Sbjct: 81 HDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGIV 118
>gi|170586586|ref|XP_001898060.1| KH domain containing protein [Brugia malayi]
gi|158594455|gb|EDP33039.1| KH domain containing protein [Brugia malayi]
Length = 451
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 63/322 (19%)
Query: 50 AKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY 109
A +++ D P+R++T++ + +N + E + +D + ED
Sbjct: 165 ANLTVPDSQTPERVLTLTATTENIANCLREI--------IPRLDE----------NREDD 206
Query: 110 HINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE 169
H RM+ ++K+++ +H G++IG+GG +IK++R+ +GA ++V S P STE
Sbjct: 207 H--DRRMKKADRSDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTE 264
Query: 170 RIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG 229
RIV ++G + I I I VL E +KG V PY+P M P I+S Y
Sbjct: 265 RIVLLNGEVEKIIDCINIIIDVLKEIP---IKGPVRPYDP--MYYDPDIISDYGGYVPDR 319
Query: 230 EYAVPVQEVAGKKQPHPLAGLAVLGIEG-----------IGSTSLTPAALAALSGSRVKS 278
+ + V + +G+ G +G S P A+ ++V++
Sbjct: 320 NF---ISRVGRGRDFGFSSGIIPSRYPGRDDRYGGMRDMMGRYSPIP----AMQTTQVET 372
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-----KM 333
T++ + D++ G +IGK GSR+ +R+ SGAQI + E H+ ++
Sbjct: 373 -----------TDVTIPDELGGAIIGKGGSRINRVREESGAQIEV----EPHRDNGGDRI 417
Query: 334 FHIQGCQEAVSLAQYLINMCIE 355
I G +E + AQYL+ C+
Sbjct: 418 ITISGTREQIQAAQYLLQQCVR 439
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 156/376 (41%), Gaps = 94/376 (25%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 41 SMLTLRAIVSSK----EAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPL 96
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ + AY + + L + + N P+ +
Sbjct: 97 NGT----------------------ARAYALVAKGLLEGAPQMGMGGIVSNNGTHPV--R 132
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 133 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 192
Query: 188 ICLVLIECTLQVVKGAVIPYEP------------KTMNAGPVILSGGQAYTLHGEYAVPV 235
I LI+ Q G ++ Y P TMN S G Y
Sbjct: 193 IGKCLID-DWQRGTGTIL-YNPAVRASVGTTPSTSTMNQ-----SVGNGY---------- 235
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT-----------G 284
+P+ G A + SG + DT G
Sbjct: 236 -----NSRPYNRTG--------------NGADFSDQSGGYGRRSNPDTSNRGYPLVTEDG 276
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEA 342
++ I + D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A
Sbjct: 277 EEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQA 336
Query: 343 VSLAQYLINMCIELQK 358
A YL+ +E +K
Sbjct: 337 NEKALYLLYENLEAEK 352
>gi|225682425|gb|EEH20709.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 364
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 157/353 (44%), Gaps = 47/353 (13%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 43 SMLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 98
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + +SL + + N P+ +
Sbjct: 99 QGA----------------------AKAYAIVAKSLLEGAPQLGMGGVVSNNGTHPV--R 134
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 135 LLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 194
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
I LI+ Q G V+ Y P V S G A ++ + +
Sbjct: 195 IGKCLID-DWQRGTGTVL-YNP------AVRASVGGA-PINNSLGSGGSSGGYGGRSYNR 245
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
G + G S + AA G + + + G++ I + D+ GC+IG+ G
Sbjct: 246 TGNGADFSDQTGGYSRRSNSDAANRGIPLVT---EDGEEVQTQNISIPSDMVGCIIGRGG 302
Query: 308 SRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
S++ EIR+ SGA+I+I E+ ++MF I G A A YL+ +E +K
Sbjct: 303 SKISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEK 355
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 84/366 (22%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R + V+ E +IG G V LR E+G + ++ DR++TV+G++
Sbjct: 45 LTLRAI----VSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGALSG 100
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCS-PQPLQLKLV 129
+ AY+ + + L + + + N S P+ +L+
Sbjct: 101 ----------------------ISKAYHLVAKGLLEGAPSVGMGGVINTSGTHPV--RLL 136
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D SG + +MLP STERIV + G P+ I +A ++I
Sbjct: 137 ISHNQMGTIIGRAGLKIKQIQDASGVRMVAQKEMLPQSTERIVEIQGTPEGIEKATWEIG 196
Query: 190 LVLIECTLQVVKGAVIPYEP----KTMNAGPVI--LSGGQAY--TLHGE-------YAVP 234
LI+ + G V+ Y P + GPV +G ++Y T HG Y+
Sbjct: 197 KCLID-DHERGYGTVL-YNPAVRVQAGTTGPVTNGFTGNRSYNRTGHGNDFSDSPTYSRR 254
Query: 235 VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVL 294
A + P P + G++ I +
Sbjct: 255 SGSDAASRPPMPTT--------------------------------TEDGEEIQTQNISI 282
Query: 295 TDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINM 352
D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G + A YL+
Sbjct: 283 PSDMVGCIIGRGGSKISEIRKSSGARISIAKAPHDETGERMFTIMGSPSSNEKALYLLYE 342
Query: 353 CIELQK 358
+E +K
Sbjct: 343 NLEAEK 348
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 8/149 (5%)
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
VD+V ++ + + I R E Q L L+ ++ + G +IGK G + ++RD
Sbjct: 14 VDDVSQSFQHLSTTDSGEPIPRTEEEYAQAQ-LTLRAIVSSKEAGVIIGKAGQNVANLRD 72
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
+G V S ++P +R++TV G IS+A + + L+E V G VI T
Sbjct: 73 ETGVRAGV-SKVVPGVHDRVLTVTGALSGISKAYHLVAKGLLEGAPSVGMGGVI----NT 127
Query: 212 MNAGPV--ILSGGQAYTLHGEYAVPVQEV 238
PV ++S Q T+ G + ++++
Sbjct: 128 SGTHPVRLLISHNQMGTIIGRAGLKIKQI 156
>gi|295660901|ref|XP_002791006.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280933|gb|EEH36499.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 364
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 157/353 (44%), Gaps = 47/353 (13%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 43 SMLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 98
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ AY + +SL + + N P+ +
Sbjct: 99 QGA----------------------AKAYAIVAKSLLEGAPQLGMGGVVSNNGTHPV--R 134
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 135 LLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 194
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
I LI+ Q G V+ Y P V S G A ++ + +
Sbjct: 195 IGKCLID-DWQRGTGTVL-YNP------AVRASVGGA-PINNSLGSGASSGGYGGRSYNR 245
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
G + G S + AA G + + + G++ I + D+ GC+IG+ G
Sbjct: 246 TGNGADFSDQTGGYSRRSNSDAANRGIPLVT---EDGEEVQTQNISIPSDMVGCIIGRGG 302
Query: 308 SRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
S++ EIR+ SGA+I+I E+ ++MF I G A A YL+ +E +K
Sbjct: 303 SKISEIRRSSGARISIAKAPHDETGERMFTIMGSAAANEKALYLLYENLEAEK 355
>gi|295673384|ref|XP_002797238.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282610|gb|EEH38176.1| Poly(rC)-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 495
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 167/415 (40%), Gaps = 116/415 (27%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 132 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 186
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 187 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 222
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLIILGVADAVHIATY 282
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 283 YVAVTLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYIPQP--------AGGQYG 334
Query: 224 ---AYTLH----------GEYAVPVQEV------------------------AGKKQPHP 246
+ H G Y VP AG QP P
Sbjct: 335 HPDTFKRHQPQGTRAVSTGGYGVPYVHGQPGQPQMPQQALHYGASSRPGYTGAGPHQPSP 394
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
+ G S+ GG G + +I + +D+ G +IGK
Sbjct: 395 YGAPQPGQVHGAPSSQPV--------------GGVVPGAPVTQ-QIFIPNDMVGAIIGKG 439
Query: 307 GSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
G+++ EIR +SG+ I I+ + S++++ I G E +A Y++ +E +K+
Sbjct: 440 GAKINEIRHLSGSVIKINEPQDNSNERLVTITGTPECNQMALYMLYSRLESEKHR 494
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 143/326 (43%), Gaps = 44/326 (13%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG ++RLR E A ++I D P+RIVT+ V
Sbjct: 51 AVIGKGGESIKRLRAECDATLTIPDSQTPERIVTI----------------------VAE 88
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-PLQLKLVIPATHCGSLIGKGGCKIKDIR 150
+DNV N + L++ R+ + S + +L+L++ +H G++IG+GG +IK++R
Sbjct: 89 IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELR 148
Query: 151 DLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQ--VVKGAVIPYE 208
+ + ++V S P STER++ + G P+ I C++LI L+ +KG PYE
Sbjct: 149 EETSTQLKVYSQCCPQSTERVIQIIGVPEKII-----ACVILIINMLKEIPIKGPSRPYE 203
Query: 209 PKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAAL 268
+ V GG + P + G P P A G G+G
Sbjct: 204 SMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLP-PRAPRFPYGGRGMGMGVSPFPPA 262
Query: 269 AALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE 328
+ T++ + +++ G +IGK G R+ IR+ SGA I +
Sbjct: 263 PFGGPMQT-------------TQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQP 309
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCI 354
+ +++ I G + AQYL+ I
Sbjct: 310 NSERIITISGSHAQIQTAQYLLQQWI 335
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+L+L++P+ G++IGKGG IK +R A + + P ERIVT+ D + +
Sbjct: 39 ELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP---ERIVTIVAEIDNVIRC 95
Query: 185 IYQICLVLIEC 195
+ +I L EC
Sbjct: 96 VNEIIPRLDEC 106
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 156/365 (42%), Gaps = 72/365 (19%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 41 SMLTLRAIVSSK----EAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPL 96
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+ + AY + + L + + N P+ +
Sbjct: 97 NGT----------------------ARAYALVAKGLLEGAPQMGMGGIVSNNGTHPV--R 132
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 133 LLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 192
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTM-NAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
I LI+ Q G ++ Y P + G + ++ Y +P+
Sbjct: 193 IGKCLID-DWQRGTGTIL-YNPAVRASVGTTTSTSTMNQSVGNGY---------NSRPYN 241
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT-----------GDDFVETEIVLT 295
G A + SG + DT G++ I +
Sbjct: 242 RTG--------------NGADFSDQSGGYGRRSNPDTSNRGYPLVTEDGEEIQTQNISIP 287
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMC 353
D+ GC+IG+ GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+
Sbjct: 288 ADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYEN 347
Query: 354 IELQK 358
+E +K
Sbjct: 348 LEAEK 352
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
E + L L+ ++ + G +IGK G + D+RD +G V S ++P +R++TV G
Sbjct: 36 EEYAQSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGV-SKVVPGVHDRVLTVTG 94
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVI 205
+ ++A + L+E Q+ G ++
Sbjct: 95 PLNGTARAYALVAKGLLEGAPQMGMGGIV 123
>gi|169622886|ref|XP_001804851.1| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
gi|160704873|gb|EAT77860.2| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
Length = 357
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 154/364 (42%), Gaps = 73/364 (20%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
D+ +T+R + S E +IG G V LR E+G + ++ DR+++V+GS
Sbjct: 42 DSQLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGS 97
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRN-----RMENCSPQPL 124
+ + AY + + L D R + + L
Sbjct: 98 LSG----------------------ISKAYGLVAKGLLDGAPAMGMGGVVRTDGTHQRKL 135
Query: 125 ---QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G+P +I
Sbjct: 136 TVTAIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPSSI 195
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGK 241
+AI++I LI+ + G V+ Y P + ++Y G
Sbjct: 196 EKAIWEIGKCLID-DHERGYGTVL-YNPAGGATAGGMGG--RSYNRTG------------ 239
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-----GKDTGDDFVETEIVLTD 296
G + P + + SGS S + G + I +
Sbjct: 240 --------------NGADFSDSAPTSYSRRSGSDAASRPPPPTHDEDGVELQTQNISIPS 285
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCI 354
D+ GC+IG+ GS++ EIR+ SGA+I+I ++ ++MF I G A A YL+ +
Sbjct: 286 DMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTITGSATANEKALYLLYENL 345
Query: 355 ELQK 358
E +K
Sbjct: 346 EAEK 349
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 26/247 (10%)
Query: 114 NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
RM+ ++K+++ +H G++IG+GG +IK++R+ +GA ++V S P STERIV
Sbjct: 36 RRMKKTDRCDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTERIVL 95
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAV 233
++G + I I I VL E +KG V PY+P M P I+S Y +
Sbjct: 96 LNGEVEKIIDCINIIIDVLKEIP---IKGPVRPYDP--MYYDPDIISDYGGYVPDRNFIS 150
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
V G+ + + + S P G R G T++
Sbjct: 151 RV----GRGRDFGFSSGII--------PSRYPGRDDRYGGMRDMMGRYSPIPAMQTTQVT 198
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-----KMFHIQGCQEAVSLAQY 348
+ D++ G +IGK GSR+ +R+ SGAQI + E H+ ++ I G +E + AQY
Sbjct: 199 IPDELGGAIIGKGGSRINRVREESGAQIEV----EPHRDNGGDRIITISGTREQIQAAQY 254
Query: 349 LINMCIE 355
L+ C+
Sbjct: 255 LLQQCVR 261
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 47/236 (19%)
Query: 1 MDGNGDGKIDEDTLITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITDGA 58
+D N D D T RC V V+E +IG GG ++ LR+++GA++ +
Sbjct: 26 LDENRDDDHDRRMKKTDRCDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRC 85
Query: 59 CP---DRIVTVSGSVDNSSTS---------------------------SVETGYPGHTLW 88
P +RIV ++G V+ + + Y G+
Sbjct: 86 APQSTERIVLLNGEVEKIIDCINIIIDVLKEIPIKGPVRPYDPMYYDPDIISDYGGYVPD 145
Query: 89 VTSVDNVCTAYNFMCRS----------LEDYHINRNRMENCSPQPLQ--LKLVIPATHCG 136
+ V +F S + Y R+ M SP P ++ IP G
Sbjct: 146 RNFISRVGRGRDFGFSSGIIPSRYPGRDDRYGGMRDMMGRYSPIPAMQTTQVTIPDELGG 205
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY--QICL 190
++IGKGG +I +R+ SGA ++V +RI+T+ G + I A Y Q C+
Sbjct: 206 AIIGKGGSRINRVREESGAQIEVEPHR-DNGGDRIITISGTREQIQAAQYLLQQCV 260
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 68/355 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R L V+ + +IG G V LR+++G K ++ +R++TV+GSV+
Sbjct: 28 LTLRAL----VSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIAGVHERVLTVTGSVEA 83
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQ 125
V AYN + L N + P
Sbjct: 84 ----------------------VAKAYNLIISQLVS--------SNPAAPPASSSNVHTS 113
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++L+I G++IG+ G KIK I+D SGA + + +MLP STER+V V G+P+ I +A+
Sbjct: 114 IRLLISHNLMGTIIGRNGLKIKAIQDNSGARMVASKEMLPQSTERVVEVQGSPEAIGRAV 173
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
+I L+E + + G V+ + P + GGQ Y+ G ++P+
Sbjct: 174 EEIGKCLLEDWERGL-GTVL-FHPGPHDDRSRSNRGGQ-------YSGSYPTGGGSRRPN 224
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
S A + + S + I + D+ GC+IG+
Sbjct: 225 --------------GDSANRARAPSPGSPQSPSSSNPPATNLRTQNISIPSDMVGCIIGR 270
Query: 306 AGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+G+++ EIR++SG++I+I ++ ++MF I G EA A +L+ +E +K
Sbjct: 271 SGTKITEIRRLSGSKISIAKAPHDDTGERMFTIVGTPEANEKALFLLYNQLESEK 325
>gi|302926012|ref|XP_003054209.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
gi|256735150|gb|EEU48496.1| hypothetical protein NECHADRAFT_30745 [Nectria haematococca mpVI
77-13-4]
Length = 472
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 172/416 (41%), Gaps = 109/416 (26%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVT 65
+DE T I +R + S E + +IG GG V +RK S A+ +++D GA +RI+T
Sbjct: 106 LDETTWIHIRAVISSP----EAATVIGKGGENVSNIRKLSNARCTVSDYQKGAV-ERILT 160
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
VSG VD V A+ + R+L + +N + + PL
Sbjct: 161 VSGIVDA----------------------VAKAFGLIIRTLNNEPLNESSTSSSKTYPL- 197
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A
Sbjct: 198 -RLLIPHILIGSIIGKGGARIREIQEASGARLNASDACLPMSSERSLVVMGVADAVHIAT 256
Query: 186 YQICLVLIE-----------CTLQVVKGA----------VIPYEPKTMNAGPVILSGGQA 224
Y + L+E GA V+PY P+ + G+
Sbjct: 257 YYVGSTLLEQLNDRFGGPAASAYATRSGAPAGSIPGGMQVVPYCPQPASGH---YGRGEN 313
Query: 225 YTLHGEY-----------------------AVPVQEVAGKK----------QPH--PLAG 249
Y H + A+P+ + QPH P AG
Sbjct: 314 YARHNDRRSHHMPPAPYPQQYPHAAAQANPAMPMHYGGAQGGGAYGAAPHVQPHMPPHAG 373
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
G G+ P A GG T ++ ++V G +IGK G +
Sbjct: 374 PQAHG----GAPQAQPMGAAI-------PGGPITQQIYIPNDMV------GAIIGKGGQK 416
Query: 310 LLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNT 364
+ EIRQ+S + I I+ + S++++ I G +E +A Y++ + +N T N
Sbjct: 417 INEIRQMSNSVIKINEPQDNSNERLVTITGTEECNRMALYMLYSRLGEVQNRTGNN 472
>gi|170087462|ref|XP_001874954.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650154|gb|EDR14395.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 339
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 98/197 (49%), Gaps = 30/197 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 57 IHMRCL----IVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 112
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 113 ----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIPN 148
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGK G KIK+I+D SGA + + MLP STER+++V G D I A Y I +L
Sbjct: 149 SRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNIL 208
Query: 193 IECTLQVVKGAVIPYEP 209
IE ++ A Y P
Sbjct: 209 IEAQERMPSSANSTYRP 225
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 136 GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 195
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTSDNPEPA 371
A+ +A Y I N+ IE Q+ ++ + P+
Sbjct: 196 AIHIATYYIGNILIEAQERMPSSANSTYRPS 226
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 30/190 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG G ++ ++ SGA+++ ++G P +R+++V+G D
Sbjct: 140 VTIKFMIPNS----RMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 195
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCR-SLEDYHINRNRMENCSPQPLQLKLVI 130
+ T Y G+ L + + + + ++ N R S + Q ++ I
Sbjct: 196 ---AIHIATYYIGNIL-IEAQERMPSSANSTYRPSRYASNPYPPPHNPPPQQLQTQQIYI 251
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST---------------ERIVTVH 175
P G +IGKGG KI +IR +S + +++ M P + ER+V +
Sbjct: 252 PNDLVGCIIGKGGSKINEIRHMSASQIKI---MEPGAVGVGMNGAPAPAGGEGERLVVIT 308
Query: 176 GNPDTISQAI 185
G P I A+
Sbjct: 309 GQPANIQMAV 318
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
I + +D+ GC+IGK GS++ EIR +S +QI I
Sbjct: 249 IYIPNDLVGCIIGKGGSKINEIRHMSASQIKI 280
>gi|322698027|gb|EFY89801.1| hypothetical protein MAC_04233 [Metarhizium acridum CQMa 102]
Length = 456
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/389 (25%), Positives = 164/389 (42%), Gaps = 76/389 (19%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 103 DETSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG A+ + R+L + + + PL
Sbjct: 158 SG----------------------------IAFGLIIRTLNNEPLGEASTASSKTYPL-- 187
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 188 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 247
Query: 187 QICLVLIECTLQVVKG-AVIPYEPKTMNAGPVILSGGQ--AYTLH---GEYAVPVQEVAG 240
+ L+E + G A Y ++ I G Q Y+ G Y P E G
Sbjct: 248 YVGSTLLEQLNERFGGPAASAYATRSGAPAGSIPGGMQVVPYSPQPASGHYGRP--ENYG 305
Query: 241 KKQ---PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE-------- 289
+ Q H + A + PA G + GG +
Sbjct: 306 RHQDRRAHHMPPAAYPPHYPHNAAPPNPAMPMQYGGQQAAYGGAPHATQHMPPHVGPQPH 365
Query: 290 ------------------TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
+I + +D+ G +IGK G ++ EIRQ+SG+ I I+ + S+
Sbjct: 366 GGPQGPPMQHGMPGGPLTQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSN 425
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIELQKN 359
+++ I G +E +A Y++ +E +K+
Sbjct: 426 ERLVTITGTEECNRMALYMLYSRLESEKH 454
>gi|115399196|ref|XP_001215187.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192070|gb|EAU33770.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 459
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 178/402 (44%), Gaps = 91/402 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 97 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 151
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ P L
Sbjct: 152 SG----------------------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYP--L 187
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 188 RLLIPHILIGSIIGKGGGRIREIQEASGARLNASDACLPLSTERSLVILGVADAVHIATY 247
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 248 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQP--------AGGQYG 299
Query: 224 ---AYTLH---------GEYAVPVQEVAGKKQPHPLA------GLAVLGIEGIG--STSL 263
+ H G Y VP + G+ P P+A G A G G +
Sbjct: 300 HPDTFKRHHPHPNRGAAGAYGVPY--LHGQAAPTPVAQPAMHYGAAPTPYAGAGPHQPAP 357
Query: 264 TPAALAALSGSRVK----SGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
P + G +GG G + +I + +D+ G +IGK G+++ EIR +SG+
Sbjct: 358 YPPQVPQPRGGPTPVAPVAGGAMPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRHLSGS 416
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
I I+ E S++++ I G QE +A Y++ +E +K+
Sbjct: 417 VIKINEPQENSNERLVTITGTQECNQMALYMLYSRLESEKHR 458
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 152/354 (42%), Gaps = 51/354 (14%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGS 69
+++T+R + S E +IG G V LR E+G K ++ P DR++TV+G
Sbjct: 41 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSK-VVPGVHDRVLTVTGP 95
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQL 126
+ + AY + + L + + N P+
Sbjct: 96 LQGT----------------------ARAYALVAKGLLEGAPQMGMGGIVNNNGTHPV-- 131
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A++
Sbjct: 132 RLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVW 191
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
+I LI+ Q G ++ Y P + S + +G + P G
Sbjct: 192 EIGKCLID-DWQRGTGTIL-YNPAVRASVGGSTSMNTSSVGNGYNSRPYNRT-GNGADFS 248
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
G TS L G +++ I + D+ GC+IG+
Sbjct: 249 DGQSGGYGRRSNPDTSNRGYPLVTEDGEEIQT-----------QNISIPADMVGCIIGRG 297
Query: 307 GSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
GS++ EIR+ SGA+I+I E+ ++MF I G +A A YL+ +E +K
Sbjct: 298 GSKITEIRRSSGARISIAKAPHDETGERMFTIMGSAQANEKALYLLYENLEAEK 351
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 1/98 (1%)
Query: 108 DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMS 167
D I E + L L+ ++ + G +IGK G + D+RD +G V S ++P
Sbjct: 27 DMEITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVPGV 85
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
+R++TV G ++A + L+E Q+ G ++
Sbjct: 86 HDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGIV 123
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 132/312 (42%), Gaps = 76/312 (24%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MR L + + S +IG GG V +R++SGA+I++++ P+RI+ V+G +D
Sbjct: 122 IHMRAL----IVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGPLDA 177
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 178 ----------------------VAKAFGLIVRQINDEPFEQPSVPGS--RAVTIKFIIPN 213
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ G+LIGK G KIK+I++ SGA + + +LP STER++ V G D I A Y + L
Sbjct: 214 SRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVADAIHIATYYVGNSL 273
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
+N+ P S H Y K+Q P+A
Sbjct: 274 -------------------LNSHPSYSS------THASY---------KQQRRPMA---- 295
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE-IVLTDDIAGCVIGKAGSRLL 311
ST+ P + +T+ + +D+ G +IGK G+++
Sbjct: 296 -------STTYYPPNTPVSNYGYPGPAAAPAPVSLQQTQNFYIPNDLVGSIIGKGGAKIN 348
Query: 312 EIRQISGAQINI 323
EIR +SG QI I
Sbjct: 349 EIRHVSGCQIKI 360
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 39/214 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + LIG G ++ +++ SGAK+ ++G P +R++ VSG D
Sbjct: 205 VTIKFIIPNS----RMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVAD 260
Query: 72 NSSTSSVETGYPGHTLWVT--SVDNVCTAYNFMCRSLED--YHINRNRMEN--------- 118
+ T Y G++L + S + +Y R + Y+ + N
Sbjct: 261 ---AIHIATYYVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPNTPVSNYGYPGPAAA 317
Query: 119 ---CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----------ASDMLP 165
S Q Q IP GS+IGKGG KI +IR +SG +++ + + P
Sbjct: 318 PAPVSLQQTQ-NFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQP 376
Query: 166 MS-TERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
MS TER+VT+ G I A+ Q+ IE Q
Sbjct: 377 MSETERMVTITGGIANIQMAV-QLLASRIEQEKQ 409
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 112 NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N + PQ + ++ +I +IGKGG + +IR+ SGA + V S+ +P + ERI
Sbjct: 110 NEDGTREPPPQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITV-SESIPGNPERI 168
Query: 172 VTVHGNPDTISQAI 185
+ V G D +++A
Sbjct: 169 LNVTGPLDAVAKAF 182
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G +IGKAGS++ EI++ SGA+++ G S +++ ++ G +
Sbjct: 201 GSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVAD 260
Query: 342 AVSLAQYLI 350
A+ +A Y +
Sbjct: 261 AIHIATYYV 269
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 152/363 (41%), Gaps = 85/363 (23%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 132 DESGWIHIRAVISSA----EAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 186
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + + PL
Sbjct: 187 SGMQDA----------------------VAKAFGLIIRTLNNEPLEAPSTAQSKTYPL-- 222
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGK G +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 223 RLLIPHLLIGSIIGKSGVRIREIQEASGARLNASDSCLPLSTERTLVILGVADAVHIATY 282
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 283 YVAVTLVEQLTERFGGPAASAYATRSGGAAGVVPGGMQVVPYVPQP--------AGGQYG 334
Query: 224 ---AYTLH----------GEYAVP-VQEVAGKKQ-PHPLAGLAVLGIEGI-GSTSLTPAA 267
+ H G Y VP V G+ Q PH G G+ PA
Sbjct: 335 HPDTFKRHQPPGNRVVSTGGYGVPYVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAP 394
Query: 268 LAALSGSRVKSG------GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
A + V G G V +I + +D+ G +IGK G+++ EIR +SG+ I
Sbjct: 395 YGAPQPAPVHGGPSAQPAGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVI 454
Query: 322 NIH 324
I+
Sbjct: 455 KIN 457
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV 174
P+ ++ IP G++IGKGG KI +IR LSG+ +++ ++ S ER+VT+
Sbjct: 420 PVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKI-NEPQDNSNERLVTI 470
>gi|393247644|gb|EJD55151.1| hypothetical protein AURDEDRAFT_50272, partial [Auricularia
delicata TFB-10046 SS5]
Length = 313
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 151/354 (42%), Gaps = 72/354 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T+R L V + +IG G V +R +G K ++ P +R++T++GSVD
Sbjct: 1 LTLRAL----VTTKDAGVIIGKAGKNVADIRDHTGVKAGVSK-VVPGVHERVLTITGSVD 55
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V AY + L + + + P L+L+I
Sbjct: 56 G----------------------VAKAYTLIITQLLSASTSSPTISSPPPTQTALRLLIS 93
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
GS+IG+ G KIK I+D SGA + + DMLP STERIV V G + I +AI +I
Sbjct: 94 HNLMGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGTAEAIGRAIEEIGKC 153
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTL-HGEYAVPVQEVAGKKQPHPLAGL 250
L+E +E GQ L H + V ++ P
Sbjct: 154 LLE-----------DWER------------GQGTVLFHPGHGVDDGRSPSRRSP------ 184
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKD--TGDDFVETEIVLTDDIAGCVIGKAGS 308
ST +P+ + S + + ++ I + D+ GC+IG+ G+
Sbjct: 185 --------ASTFTSPSGMGRSSPVPSSPQSVNSASANNLRTQNISIPSDMVGCIIGRQGT 236
Query: 309 RLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 237 KITEIRRLSGSKISIAKTPHDETGERMFTIVGTPEANEKALFLLYNQLESEKER 290
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 169/384 (44%), Gaps = 90/384 (23%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R L V+ E +IG GG + +R+ + K ++ DR+++VSG +
Sbjct: 19 LTLRSL----VSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPEA 74
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ----LKL 128
+ AY + R L + ++ + M P P+ ++L
Sbjct: 75 IAA----------------------AYAEVARLLLETPLSDSSM---PPPPVNQFTSIRL 109
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I G++IG+ G KIK I+D+SGA + + +MLP STER+V V G D I AI++I
Sbjct: 110 LISHNLMGTVIGRAGVKIKQIQDMSGARMVASKEMLPQSTERVVEVQGAQDAIKTAIFEI 169
Query: 189 CLVLIECTLQVVKGAVIPYEPKTM-NAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
L+E + + Y P +AG +L+GG L
Sbjct: 170 AKCLLEDWER--NTGTVQYHPGAAGDAG--VLAGG------------------------L 201
Query: 248 AGLAVLG-IEGIGSTSLTPAALAAL------SGSRVKSG---GKDTGDD--FVETEIVLT 295
AV G GI TS+ + S RV G G +G + E++ VL
Sbjct: 202 GAQAVTGPTGGIRRTSMGGFGSGSPGPNFNNSDRRVSRGSISGGTSGQERRVSESQPVLN 261
Query: 296 D------------DIAGCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQGCQE 341
D D+ GC+IG+ G+++ EIR++SG++I+I E+ ++MF I G E
Sbjct: 262 DPNLRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAKVPHDETGERMFTIVGTAE 321
Query: 342 AVSLAQYLINMCIELQKNNTTNTS 365
+ A L+ +E +K N S
Sbjct: 322 STERALMLLYSQLESEKERRVNQS 345
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI--NIHTGTESHKKMFHIQGCQEA 342
+ F ++++ ++ G VIG+AG ++ +I+ +SGA++ + +S +++ +QG Q+A
Sbjct: 102 NQFTSIRLLISHNLMGTVIGRAGVKIKQIQDMSGARMVASKEMLPQSTERVVEVQGAQDA 161
Query: 343 VSLAQYLINMC-IELQKNNTTNTSDNPEPADLDAAISA 379
+ A + I C +E + NT +P A DA + A
Sbjct: 162 IKTAIFEIAKCLLEDWERNTGTVQYHPGAAG-DAGVLA 198
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
SP+ L L+ ++ G +IGKGG I +IR ++ V S ++P +R+++V G+P
Sbjct: 14 ASPEELTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGV-SKVVPGVQDRVLSVSGDP 72
Query: 179 DTISQAIYQICLVLIECTL 197
+ I+ A ++ +L+E L
Sbjct: 73 EAIAAAYAEVARLLLETPL 91
>gi|328851244|gb|EGG00400.1| hypothetical protein MELLADRAFT_39696 [Melampsora larici-populina
98AG31]
Length = 420
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 97/183 (53%), Gaps = 32/183 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
I MR L + + S +IG GG + +R++SGA+ +I++ A P +RI++V G +D
Sbjct: 90 IQMRAL----IVTQDASIIIGKGGRHINEIREKSGARATISE-AVPGNAERILSVGGPLD 144
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + ++ V+P
Sbjct: 145 A----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIRFVVP 180
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGK G KIK+I+D+SGA VQ + MLP STER+++V G D + A+Y + ++
Sbjct: 181 NSRMGSVIGKAGSKIKEIQDMSGARVQASEAMLPGSTERVLSVSGVADAVHIAVYYVGMI 240
Query: 192 LIE 194
L+E
Sbjct: 241 LVE 243
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
Q +Q++ +I +IGKGG I +IR+ SGA + S+ +P + ERI++V G D +
Sbjct: 88 QTIQMRALIVTQDASIIIGKGGRHINEIREKSGARATI-SEAVPGNAERILSVGGPLDAV 146
Query: 182 SQAI 185
S+A
Sbjct: 147 SKAF 150
>gi|336367212|gb|EGN95557.1| hypothetical protein SERLA73DRAFT_186638 [Serpula lacrymans var.
lacrymans S7.3]
Length = 370
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
+I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 67 MIHMRCL----IVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD 122
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + +K +IP
Sbjct: 123 A----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIP 158
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGK G KIK+I+D SGA + + MLP STER+++V G D I A Y I +
Sbjct: 159 NSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNI 218
Query: 192 LIEC 195
LIE
Sbjct: 219 LIEA 222
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 147 GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 206
Query: 342 AVSLAQYLI-NMCIELQK 358
A+ +A Y I N+ IE Q+
Sbjct: 207 AIHIATYYIGNILIEAQE 224
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+I + +D+ GC+IGK GS++ EIR +S +QI I
Sbjct: 277 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKI 309
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 83/204 (40%), Gaps = 40/204 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG G ++ ++ SGA+++ ++G P +R+++V+G D
Sbjct: 151 VTIKFMIPNS----RMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 206
Query: 72 NSSTSSVETGYPGHTL-------------WVTSVDNVCTAYNFMCRSL-----EDYHINR 113
+ T Y G+ L N + S + +
Sbjct: 207 ---AIHIATYYIGNILIEAQERMPSSSHSSYRPSSNPSRRAPYQGSSYVPGYSQPFGSGP 263
Query: 114 NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ--------VASDMLP 165
N Q ++ IP G +IGKGG KI +IR +S + ++ V + P
Sbjct: 264 PPPHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAP 323
Query: 166 MST----ERIVTVHGNPDTISQAI 185
T ER+V + G P I A+
Sbjct: 324 APTGGEGERLVVITGQPANIQMAV 347
>gi|47223151|emb|CAG11286.1| unnamed protein product [Tetraodon nigroviridis]
Length = 414
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 137/317 (43%), Gaps = 81/317 (25%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+LVIPA+ CGSLIGKGG KIK+IR+ I+ HG+
Sbjct: 60 PVTLRLVIPASQCGSLIGKGGAKIKEIRE---------------ECPLILIEHGS----- 99
Query: 183 QAIYQICLVLIECTLQV---VKGAVIPYEPKTMNAGPVI------------------LSG 221
V +C Q +GA IPY P A +I G
Sbjct: 100 --------VRTDCISQFKVPPQGATIPYRPSPSPAAVLIGNQLFDASEFASHPMYSVTQG 151
Query: 222 G----QAYTLHGEYAVPVQEVAGKKQP------HPLAGLAVLGIEGIGSTSLTPAALAAL 271
G QAYTL +Y +P E+A Q +PLA A I G+ S S T L
Sbjct: 152 GLDLQQAYTLQNQYGIPHSELAKLHQLSMQQGLNPLAQPASAVIPGMDSNSQTSQELLIP 211
Query: 272 SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
+ + + + G +IG+ G+++ EIRQ+SGAQI I + + +
Sbjct: 212 NDPKRLTRFAPAPPQLI-----------GSIIGRQGTKINEIRQVSGAQIKIGSQLDGTS 260
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLI 390
+ I G +++LAQYLI C+E K +T + P DL+ A + + + +
Sbjct: 261 DRHVTITGTPVSINLAQYLITSCLETAK-STAQAATLAAPVDLNMAFTQPASPAAS---- 315
Query: 391 EKPTPHPGSMVTLGGLS 407
PTP ++ T+G L+
Sbjct: 316 --PTP---TLATMGALT 327
>gi|393236643|gb|EJD44191.1| eukaryotic type KH-domain (KH-domain type I) [Auricularia delicata
TFB-10046 SS5]
Length = 450
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 95/185 (51%), Gaps = 30/185 (16%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSV 70
+I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +
Sbjct: 95 AMIHMRCL----IVTQDASIIIGKGGAHVNEIREKSGARVVVSESIPGNPERILNVSGPL 150
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
D V A+ + R + D + + + + +K +I
Sbjct: 151 DA----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMI 186
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
P + GS+IGKGG KIK+I++ SGA + + +LP STER+++V G D I A Y I
Sbjct: 187 PNSRMGSVIGKGGVKIKEIQEASGARLNASEGVLPGSTERVLSVAGVADAIHIATYYIGN 246
Query: 191 VLIEC 195
+L+E
Sbjct: 247 ILLEA 251
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK G ++ EI++ SGA++N G S +++ + G +
Sbjct: 176 GSRAVTIKFMIPNSRMGSVIGKGGVKIKEIQEASGARLNASEGVLPGSTERVLSVAGVAD 235
Query: 342 AVSLAQYLI-NMCIELQKN---NTTNTSDNPEPA 371
A+ +A Y I N+ +E Q + ++ + S P PA
Sbjct: 236 AIHIATYYIGNILLEAQAHGGPHSNHASYRPAPA 269
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI-------HTGTESHKKMFHIQGCQEAV 343
+I + +D+ GC+IGK GS++ EIR +S + I I G ++++ I G +
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 344 SLAQYLINMCIELQK 358
+A L+ +E +K
Sbjct: 426 QMAVSLLYQRLEQEK 440
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ-----VASDMLPMSTERIVTVHGNPDTI 181
++ IP G +IGKGG KI +IR LS + ++ VA D ER+VT+ G P I
Sbjct: 366 QIFIPNDLVGCIIGKGGSKINEIRHLSASAIKIMEPGVAGDAGGGPNERLVTITGAPHNI 425
Query: 182 SQAI---YQ 187
A+ YQ
Sbjct: 426 QMAVSLLYQ 434
>gi|336379931|gb|EGO21085.1| hypothetical protein SERLADRAFT_398361 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 94/184 (51%), Gaps = 30/184 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
+I MRCL + + S +IG GG V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 1 MIHMRCL----IVTQDASIIIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD 56
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + +K +IP
Sbjct: 57 A----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIP 92
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGK G KIK+I+D SGA + + MLP STER+++V G D I A Y I +
Sbjct: 93 NSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNI 152
Query: 192 LIEC 195
LIE
Sbjct: 153 LIEA 156
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 81 GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 342 AVSLAQYLI-NMCIELQKN 359
A+ +A Y I N+ IE Q+
Sbjct: 141 AIHIATYYIGNILIEAQER 159
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+I + +D+ GC+IGK GS++ EIR +S +QI I
Sbjct: 211 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKI 243
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 77/191 (40%), Gaps = 36/191 (18%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
+ + +IG G ++ ++ SGA+++ ++G P +R+++V+G D + T Y G
Sbjct: 94 SRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD---AIHIATYYIG 150
Query: 85 HTL-------------WVTSVDNVCTAYNFMCRSL-----EDYHINRNRMENCSPQPLQL 126
+ L N + S + + N Q
Sbjct: 151 NILIEAQERMPSSSHSSYRPSSNPSRRAPYQGSSYVPGYSQPFGSGPPPPHNPPQQLQTQ 210
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ--------VASDMLPMST----ERIVTV 174
++ IP G +IGKGG KI +IR +S + ++ V + P T ER+V +
Sbjct: 211 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAVGVGMNGAPAPTGGEGERLVVI 270
Query: 175 HGNPDTISQAI 185
G P I A+
Sbjct: 271 TGQPANIQMAV 281
>gi|238487586|ref|XP_002375031.1| KH domain RNA binding protein [Aspergillus flavus NRRL3357]
gi|317143475|ref|XP_001819500.2| KH domain RNA binding protein [Aspergillus oryzae RIB40]
gi|220699910|gb|EED56249.1| KH domain RNA binding protein [Aspergillus flavus NRRL3357]
Length = 468
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 172/402 (42%), Gaps = 91/402 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 106 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 160
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ P L
Sbjct: 161 SG----------------------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYP--L 196
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 197 RLLIPHILIGSIIGKGGGRIREIQEASGARLNASDACLPLSTERSLVILGVADAVHIATY 256
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 257 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQP--------AGGQYG 308
Query: 224 ---AYTLH---------GEYAVPVQEVAGKKQ------------PHPLAGLAVLGIEGIG 259
+ H G Y VP P P AG G
Sbjct: 309 HPDTFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPAMHYGGAPQPYAGAGPHQPAPYG 368
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
+ PA + V GG G + +I + +D+ G +IGK G+++ EIR +SG+
Sbjct: 369 APQAAPARGGPTPVAPV--GGAMPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRHLSGS 425
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
I I+ E S++++ I G QE +A Y++ +E +K+
Sbjct: 426 VIKINEPQENSNERLVTITGTQECNQMALYMLYSRLESEKHR 467
>gi|330917577|ref|XP_003297863.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
gi|311329164|gb|EFQ93994.1| hypothetical protein PTT_08419 [Pyrenophora teres f. teres 0-1]
Length = 371
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 159/373 (42%), Gaps = 61/373 (16%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
++ +T+R + V+ E +IG G V LR E+G + ++ DR+++V+GS
Sbjct: 42 ESQLTLRAI----VSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGS 97
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRN-----RMENCSPQPL 124
+ + AY + L + R + P
Sbjct: 98 LSG----------------------ISKAYGLAAKGLLEGAPAMGMGGVIRTDGTHP--- 132
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G+P I +A
Sbjct: 133 -IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPAGIEKA 191
Query: 185 IYQICLVLIECTLQ----VVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAG 240
+++I LI+ + V+ V+ +P GP+ GG + +
Sbjct: 192 VWEIGKCLIDDHERGYGTVLYNPVVRVQPGA-GPGPLSNGGGAPSGGGSGGGGGMGGRSY 250
Query: 241 KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-----GKDTGDDFVETEIVLT 295
+ H S +P A + SGS S + G++ I +
Sbjct: 251 NRTGHG------------ADFSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIP 298
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMC 353
D+ GC+IG+ G+++ EIR+ S A+I+I ++ ++MF I G A A YL+
Sbjct: 299 SDMVGCIIGRGGTKISEIRKTSNARISIAKAPHDDTGERMFTITGSASANEKALYLLYEN 358
Query: 354 IELQKNNTTNTSD 366
+E +K + +
Sbjct: 359 LEAEKMRRSQAQE 371
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 157/344 (45%), Gaps = 40/344 (11%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ I +IG GG IVR L+ ESGA +S+ C +R+++++ S ++E+ Y
Sbjct: 318 DRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITAS------ENIESRYSPA 371
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V V RS+ D I + + + P+ +LV+P+ G ++GKGG
Sbjct: 372 QKAVVLV---------FSRSV-DVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVI 421
Query: 146 IKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVK 201
I +IR ++G N+++ +SD +P ++ IV + G + A+Y + L + V
Sbjct: 422 ISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFLVPY 481
Query: 202 GAVIPYEPKTMNAGPVILSGGQAYTLHG----------EYAVPVQEVAGKKQPHPLAGLA 251
G V P + + PV S G ++ H +++ G P L+G++
Sbjct: 482 GRVRDTAP-LVRSTPVGTSHG-SFMQHSTAQSSDDLGLSHSLDSPSSPGLWPPQSLSGIS 539
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
I G + SG ++ SG K EIV+ DD+ V G+ G+ L
Sbjct: 540 SRAISDAGR-----GLPSHRSGVQLGSGNKTAIVTNTTVEIVVPDDVISLVYGENGTNLT 594
Query: 312 EIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+RQISGA++ +H ++ ++ I G + AQ L++ I
Sbjct: 595 RLRQISGAKVIVHEPDPITNDRLIVISGTPDETQAAQSLLHAFI 638
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 36/316 (11%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDN 72
+ R L H+S I +IG G ++++L++ +G KI + + PDR+VTV GS
Sbjct: 58 VAFRMLCHAS----RIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPAL 113
Query: 73 SSTSSVE--TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
+S +E +G G + + R LE + +L+
Sbjct: 114 TSRVFLEQNSGASGEEVEASKAQE--GLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLA 171
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQ 187
GS+IGKGG ++ IR SG ++V +D LP ++ ++ + G+ I +A+
Sbjct: 172 DVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLA 231
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
+ L +C P E +T+ ++ LH ++ + V L
Sbjct: 232 VSRRLQDCP---------PSEKRTVRPAEAVIHE-TLPDLHMDHILQRNSVLPI-----L 276
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+ + GI S S+ L + + V +I+ +D G VIGK G
Sbjct: 277 PSSSNIFASGIHSLSIDADMLPPVD--------TNVAQQDVVFKILCANDRIGGVIGKGG 328
Query: 308 SRLLEIRQISGAQINI 323
+ + ++ SGA +++
Sbjct: 329 TIVRALQNESGATVSV 344
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 30/182 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+MR L + + S +IG GG V +R++S A++++++ P+RI+ VSG +D
Sbjct: 80 ISMRSL----IVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDA 135
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 136 ----------------------VAKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFIIPN 171
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I++ SGA + + MLP STER+++V G D + A+Y I +L
Sbjct: 172 SRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTIL 231
Query: 193 IE 194
+E
Sbjct: 232 LE 233
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 88/192 (45%), Gaps = 40/192 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ +++ SGA+++ ++ P +R+++VSG D
Sbjct: 163 VTIKFIIPNS----RMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVAD 218
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYN--FMCRSLEDYHINRNR-----MENCSPQPL 124
+ V + + Y + + Y +++R P +
Sbjct: 219 ------------AVHIAVYYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPPPGM 266
Query: 125 QLK-LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST----------ERIVT 173
Q + + IP G++IG+GG KI +IR S ++V P +T ER+VT
Sbjct: 267 QTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTD---PGTTVPGGAAANPEERLVT 323
Query: 174 VHGNPDTISQAI 185
+ G PD I+ A+
Sbjct: 324 ITGYPDNINAAV 335
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI++ SGA++N S +++ + G +
Sbjct: 159 GSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVAD 218
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTS 365
AV +A Y I + +E Q N +
Sbjct: 219 AVHIAVYYIGTILLEYQDRYPANAT 243
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
PQ + ++ +I +IG+GG + +IR+ S A V V S+ +P + ERI+ V G D
Sbjct: 77 PQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTV-SESIPGNPERILNVSGPLDA 135
Query: 181 ISQAI 185
+++A
Sbjct: 136 VAKAF 140
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 30/182 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+MR L + + S +IG GG V +R++S A++++++ P+RI+ VSG +D
Sbjct: 80 ISMRSL----IVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDA 135
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 136 ----------------------VAKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFIIPN 171
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I++ SGA + + MLP STER+++V G D + A+Y I +L
Sbjct: 172 SRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTIL 231
Query: 193 IE 194
+E
Sbjct: 232 LE 233
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 24/184 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ +++ SGA+++ ++ P +R+++VSG D
Sbjct: 163 VTIKFIIPNS----RMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVAD 218
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ G T+ + D + + + N P ++ IP
Sbjct: 219 AVHIAVYYIG----TILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPPPGMQTQQIFIP 274
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST----------ERIVTVHGNPDTI 181
G++IG+GG KI +IR S ++V P +T ER+VT+ G PD I
Sbjct: 275 NALVGAIIGRGGSKINEIRSQSSCQIRVTD---PGTTVPGGAAANPEERLVTITGYPDNI 331
Query: 182 SQAI 185
+ A+
Sbjct: 332 NAAV 335
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI++ SGA++N S +++ + G +
Sbjct: 159 GSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVAD 218
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTS 365
AV +A Y I + +E Q +N +
Sbjct: 219 AVHIAVYYIGTILLEYQDRYPSNAT 243
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
PQ + ++ +I +IG+GG + +IR+ S A V V S+ +P + ERI+ V G D
Sbjct: 77 PQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTV-SESIPGNPERILNVSGPLDA 135
Query: 181 ISQAI 185
+++A
Sbjct: 136 VAKAF 140
>gi|367019960|ref|XP_003659265.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
gi|347006532|gb|AEO54020.1| hypothetical protein MYCTH_2296066 [Myceliophthora thermophila ATCC
42464]
Length = 482
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 102/205 (49%), Gaps = 32/205 (15%)
Query: 3 GNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GAC 59
G G DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA
Sbjct: 111 GPPPGAHDETSWIHVRAVISSP----EAATIIGKGGENVSKIRQMSGAKCTVSDYQKGAV 166
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
+RI+TVSG VD V A+ + R+L + +N ++
Sbjct: 167 -ERILTVSGIVDA----------------------VAKAFGLIIRTLNNEPLNEPSSQHS 203
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
PL +L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D
Sbjct: 204 KTYPL--RLLIPHILIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVAD 261
Query: 180 TISQAIYQICLVLIECTLQVVKGAV 204
+ A Y + L+E + GA
Sbjct: 262 AVHIATYYVGSTLLEQLNERFGGAA 286
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQISG+ I I+ + S++++ I G +E +A Y+
Sbjct: 411 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYM 470
Query: 350 INMCIELQKN 359
+ +E +K+
Sbjct: 471 LYSRLESEKH 480
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
PL ++ IP G++IGKGG KI +IR +SG+ +++ ++ S ER+VT+ G +
Sbjct: 407 PLTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTEECNR 465
Query: 183 QAIYQICLVL 192
A+Y + L
Sbjct: 466 MALYMLYSRL 475
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 30/182 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+MR L + + S +IG GG V +R++S A++++++ P+RI+ VSG +D
Sbjct: 80 ISMRSL----IVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLDA 135
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R + D + + + + +K +IP
Sbjct: 136 ----------------------VAKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFIIPN 171
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IGKGG KIK+I++ SGA + + MLP STER+++V G D + A+Y I +L
Sbjct: 172 SRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADAVHIAVYYIGTIL 231
Query: 193 IE 194
+E
Sbjct: 232 LE 233
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 24/184 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG GG ++ +++ SGA+++ ++ P +R+++VSG D
Sbjct: 163 VTIKFIIPNS----RMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVAD 218
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ G T+ + D R + N P ++ IP
Sbjct: 219 AVHIAVYYIG----TILLEYQDRYPANATGSYRQSQSRGPPPNSNAPPPPGMQTQQIFIP 274
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST----------ERIVTVHGNPDTI 181
G++IG+GG KI +IR S ++V P +T ER+VT+ G PD I
Sbjct: 275 NALVGAIIGRGGSKINEIRSQSSCQIRVTD---PGTTVPGGAAANPEERLVTITGYPDNI 331
Query: 182 SQAI 185
+ A+
Sbjct: 332 NAAV 335
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI++ SGA++N S +++ + G +
Sbjct: 159 GSRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVAD 218
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTS 365
AV +A Y I + +E Q N +
Sbjct: 219 AVHIAVYYIGTILLEYQDRYPANAT 243
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
PQ + ++ +I +IG+GG + +IR+ S A V V S+ +P + ERI+ V G D
Sbjct: 77 PQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTV-SESIPGNPERILNVSGPLDA 135
Query: 181 ISQAI 185
+++A
Sbjct: 136 VAKAF 140
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 159/340 (46%), Gaps = 46/340 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ + +IG GG IVR L+ ESGA IS+ C DR+VT++ S + ST S P
Sbjct: 122 DRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYS-----PAQ 176
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-LQLKLVIPATHCGSLIGKGGC 144
V +S+E + + +P + +LV+P+ G L+GKGG
Sbjct: 177 KAVVL----------VFSKSVE-AGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGA 225
Query: 145 KIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTISQAIYQICLVL---IECTL 197
+ ++R +GAN++V +D +PM +++V + G + AI+ L + +
Sbjct: 226 IVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLFVST 285
Query: 198 QVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEG 257
Q GA +++++ +L+GGQ TL +++ + G + P +AG+ G G
Sbjct: 286 QNSGGA------RSLSS---VLAGGQP-TLAISHSLNRHSLPGLQAPQTVAGINSRGTNG 335
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQIS 317
+ + ++ G + SG K +IV+ DD+ G V G+ GS L +RQIS
Sbjct: 336 V-----SRGLISRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQIS 390
Query: 318 GAQINIHT---GTESHKKMFHIQGCQEAVSLAQYLINMCI 354
GA++ +H GT + I G + AQ L+ I
Sbjct: 391 GAKVIVHEPRPGTS--DRTIIISGTPDETRAAQSLLQAFI 428
>gi|322708646|gb|EFZ00223.1| hypothetical protein MAA_04000 [Metarhizium anisopliae ARSEF 23]
Length = 456
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 163/393 (41%), Gaps = 84/393 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 103 DETSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG A+ + R+L + + + PL
Sbjct: 158 SG----------------------------IAFGLIIRTLNNEPLGEASTASSKTYPL-- 187
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 188 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 247
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAG---PVILSGG 222
+ L+E + G V+PY P+ + P
Sbjct: 248 YVGSTLLEQLNERFGGPAASAYATRSGAPAGSIPGGMQVVPYSPQPASGHYGRPENYGRH 307
Query: 223 QAYTLH--GEYAVPVQEVAGKKQPHPLAGLAVLGIEGI--GSTSLT--------PAALAA 270
Q H P P+P + G + G+ T P
Sbjct: 308 QDRRAHHMPPATYPPHYPHNAAPPNPAMPMQYGGQQAAYGGAPHATQHMPPHVGPQPHGG 367
Query: 271 LSGSRVKSG---GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
G ++ G G T F+ ++V G +IGK G ++ EIRQISG+ I I+
Sbjct: 368 PQGPPMQHGMPGGPLTQQIFIPNDMV------GAIIGKGGQKINEIRQISGSVIKINEPQ 421
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
+ S++++ I G +E +A Y++ +E +K+
Sbjct: 422 DNSNERLVTITGTEECNRMALYMLYSRLESEKH 454
>gi|380800003|gb|AFE71877.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 151
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGS 260
KG IPY PK ++ PVI +GGQAYT+ G+YA+P ++ + H LA
Sbjct: 5 KGVTIPYRPKP-SSSPVIFAGGQAYTIQGQYAIPQPDLT---KLHQLA------------ 48
Query: 261 TSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
+ + G+ S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQ
Sbjct: 49 --MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 106
Query: 321 INIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
I I E S + I G ++SLAQYLIN+
Sbjct: 107 IKIANPVEGSTDRQVTITGSAASISLAQYLINV 139
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S Q +L IP G +IG+ G KI +IR +SGA +++A + + ST+R VT+ G+
Sbjct: 68 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGS 126
Query: 178 PDTISQAIYQICLVL 192
+IS A Y I + L
Sbjct: 127 AASISLAQYLINVRL 141
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 93/183 (50%), Gaps = 30/183 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I MRCL + + S +IG G V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 69 IHMRCL----IVTQDASIIIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA 124
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V ++ + R + D + + + + +K +IP
Sbjct: 125 ----------------------VSKSFGLIVRRINDEPFDTPSVPGS--RAVTIKFIIPH 160
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ GS+IG+GG KIK+I+D SGA + + MLP STERI++V G D I A Y + +L
Sbjct: 161 SRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVADAIHIATYYVGNIL 220
Query: 193 IEC 195
IE
Sbjct: 221 IEA 223
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 85/206 (41%), Gaps = 40/206 (19%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
+ + +IG GG ++ ++ SGAK++ ++G P +RI++VSG D + T Y G
Sbjct: 161 SRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVAD---AIHIATYYVG 217
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL-------------------- 124
+ L + ++ R +R +P P
Sbjct: 218 NILIEAAERQPHSSSTSTYRPSG----TSSRGPRYAPTPTYSGYYGYPPPPAPAPYPPGP 273
Query: 125 --QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDML--PMST------ERIVTV 174
++ IP G +IGKGG KI +IR LS + +++ + P T ER+V +
Sbjct: 274 PQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGNPNERLVII 333
Query: 175 HGNPDTISQAIYQICLVLIECTLQVV 200
G P I A+ + V L +V
Sbjct: 334 TGQPQNIQMAVNLLYHVSFRDLLNLV 359
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+I + +D+ GC+IGK GS++ EIR +S +QI I
Sbjct: 278 QIYIPNDLVGCIIGKGGSKINEIRSLSASQIRI 310
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V + ++ G VIG+ GS++ EI+ SGA++N G S +++ + G +
Sbjct: 148 GSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVAD 207
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTS 365
A+ +A Y + N+ IE + ++S
Sbjct: 208 AIHIATYYVGNILIEAAERQPHSSS 232
>gi|347842448|emb|CCD57020.1| similar to KH domain RNA binding protein [Botryotinia fuckeliana]
Length = 488
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 168/398 (42%), Gaps = 74/398 (18%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 121 DESGWIHVRSVITSA----EAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAV-ERILTV 175
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + PL
Sbjct: 176 SGVVDA----------------------VAKAFGLIIRTLNNEPLEAPSDSTSKTYPL-- 211
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 212 RLLIPHILIGSIIGKGGVRIKEIQEASGARLNASDSYLPLSTERSLVVLGVADAVHIATY 271
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTM--NAGPV----IL 219
+ L E + G V+PY P+ N G
Sbjct: 272 YVGSTLFEQLTERFGGPAASAYASRSGGPAGVVPGGMQVVPYVPQPAGGNYGHPDNHRRS 331
Query: 220 SGGQAYTLHGEYAVPVQE-------VAGKKQPHPLAGLAVLGIEGIGSTSLTPA--ALAA 270
G +T YA P + A A AV G G+G A A+
Sbjct: 332 DRGSHHTPGNSYAQPYGQGQAPHQQPAAAAHYGGHASPAVGGYGGVGPQQPQQAGHAVPQ 391
Query: 271 LSGSRVKSG----GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
G+ G G G + + D + + GK G+++ EIRQ+SG+ I I+
Sbjct: 392 PHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAII-GKGGAKINEIRQLSGSVIKINEP 450
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
+ S++++ I G E +A Y++ +E +++ ++
Sbjct: 451 QDNSNERLVTITGTAECNQMALYMLYSRLESERHRASS 488
>gi|355709452|gb|AES03596.1| poly binding protein 3 [Mustela putorius furo]
Length = 103
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 11/100 (11%)
Query: 157 VQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP 216
VQVA DMLP STER VT+ G PD I Q + QIC+V++E KGA IPY PK + P
Sbjct: 1 VQVAGDMLPNSTERAVTISGTPDAIIQCVRQICVVMLESP---PKGATIPYRPKPAST-P 56
Query: 217 VILSGGQAYTLHGEYAVP-------VQEVAGKKQPHPLAG 249
VI +GGQAYT+ G+YA+P + ++A ++ P P G
Sbjct: 57 VIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLG 96
>gi|83767359|dbj|BAE57498.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864064|gb|EIT73362.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 482
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 170/400 (42%), Gaps = 91/400 (22%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 106 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 160
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D V A+ + R+L + ++ P L
Sbjct: 161 SG----------------------PQDAVAKAFGLIIRTLNNEPLDAPSTAQSKTYP--L 196
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + + G D + A Y
Sbjct: 197 RLLIPHILIGSIIGKGGGRIREIQEASGARLNASDACLPLSTERSLVILGVADAVHIATY 256
Query: 187 QICLVLIECTLQVVKGA---------------------VIPYEPKTMNAGPVILSGGQ-- 223
+ + L+E + G V+PY P+ +GGQ
Sbjct: 257 YVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQP--------AGGQYG 308
Query: 224 ---AYTLH---------GEYAVPVQEVAGKKQ------------PHPLAGLAVLGIEGIG 259
+ H G Y VP P P AG G
Sbjct: 309 HPDTFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPAMHYGGAPQPYAGAGPHQPAPYG 368
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
+ PA + V GG G + +I + +D+ G +IGK G+++ EIR +SG+
Sbjct: 369 APQAAPARGGPTPVAPV--GGAMPGQPLTQ-QIYIPNDMVGAIIGKGGAKINEIRHLSGS 425
Query: 320 QINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I I+ E S++++ I G QE +A Y++ + Q+
Sbjct: 426 VIKINEPQENSNERLVTITGTQECNQMALYMLYSRLGFQQ 465
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 147/355 (41%), Gaps = 86/355 (24%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 44 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 99
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 100 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 149
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 150 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 206
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGK 241
+ I +I L LI + +KG PY+P + + Y +G + + + G+
Sbjct: 207 VECI-KIILDLI--SESPIKGRAQPYDPNFYD---------ETYD-YGGFTMMFDDRRGR 253
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGC 301
P+ G +D+AG
Sbjct: 254 PVGFPMRG---------------------------------------------REDLAGS 268
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
+IGK G R+ +IR SGA I I E S ++ I G Q+ + AQYL+ ++
Sbjct: 269 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 323
>gi|396493434|ref|XP_003844034.1| hypothetical protein LEMA_P016850.1 [Leptosphaeria maculans JN3]
gi|312220614|emb|CBY00555.1| hypothetical protein LEMA_P016850.1 [Leptosphaeria maculans JN3]
Length = 245
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 117/250 (46%), Gaps = 44/250 (17%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G+P I +AI
Sbjct: 15 IRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPGGIEKAI 74
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
++I LI+ + G V+ Y P AV VQ AG
Sbjct: 75 WEIGKCLID-DHERGYGTVL-YNP----------------------AVRVQPGAGAG--- 107
Query: 246 PLAGLAVLGIE---------GIGST-SLTPAALAALSGSRVKSG-----GKDTGDDFVET 290
PL+ G G G+ S P A SGS S + G++
Sbjct: 108 PLSNGGPAGGLGGGRSYNRTGHGADFSDAPPAFTRRSGSDAASRPPPPTHTEDGEEMQTQ 167
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQY 348
I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF I G A A Y
Sbjct: 168 NISIPSDMVGCIIGRGGTKISEIRKTSGARISIAKAPHDDTGERMFTITGSASANEKALY 227
Query: 349 LINMCIELQK 358
L+ +E +K
Sbjct: 228 LLYENLEAEK 237
>gi|354542879|emb|CCE39597.1| hypothetical protein CPAR2_600100 [Candida parapsilosis]
Length = 607
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 34/189 (17%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E S ++G GG + LR+++ KI I++ P+RI+TV G+ +N
Sbjct: 220 VKEASTVVGKGGAKINHLREKAQVKIQISENLKDVPERIITVKGTAEN------------ 267
Query: 85 HTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
V A+ + R++ ED N N Q LKL+IP G +IG
Sbjct: 268 ----------VAKAFGLIVRTILGEPEDEPANLNS------QQYNLKLLIPNVIIGHIIG 311
Query: 141 KGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
K G K ++I + S A ++ A LP ST+R+++V G D I A+Y I V+IE +
Sbjct: 312 KQGLKFREIEENSAAKLKAAESPLPHSTDRVLSVLGVADAIHIAVYFIGEVVIEHKDVLK 371
Query: 201 KGAVIPYEP 209
+G VI Y P
Sbjct: 372 RGKVILYNP 380
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 105 SLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDML 164
SL+D+ P + ++ P +++GKGG KI +R+ + +Q++ ++
Sbjct: 201 SLQDFE--------SDPSYVSFRMYCPVKEASTVVGKGGAKINHLREKAQVKIQISENLK 252
Query: 165 PMSTERIVTVHGNPDTISQAIYQICLVLI 193
+ ERI+TV G + +++A I ++
Sbjct: 253 DV-PERIITVKGTAENVAKAFGLIVRTIL 280
>gi|331232797|ref|XP_003329060.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308050|gb|EFP84641.1| hypothetical protein PGTG_10800 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 378
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 98/183 (53%), Gaps = 32/183 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
I MR L + + S +IG GG + +R++SGA+ +I++ A P +RI++V+G +D
Sbjct: 106 IQMRAL----IVTQDASIIIGKGGRHINEVREKSGARATISE-AVPGNAERILSVAGPLD 160
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V A+ + R + D + + + + ++ ++P
Sbjct: 161 A----------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIRFIVP 196
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IGK G KIK+I+D+SGA VQ + +LP STER++++ G D + A+Y + ++
Sbjct: 197 NSRMGSVIGKAGSKIKEIQDMSGARVQASEALLPGSTERVLSISGVADAVHIAVYYVGMI 256
Query: 192 LIE 194
L++
Sbjct: 257 LVD 259
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQE 341
G V ++ + G VIGKAGS++ EI+ +SGA++ S +++ I G +
Sbjct: 185 GSRAVTIRFIVPNSRMGSVIGKAGSKIKEIQDMSGARVQASEALLPGSTERVLSISGVAD 244
Query: 342 AVSLAQYLINM-CIELQKNNTTNTSDNP 368
AV +A Y + M ++ Q+ NTS P
Sbjct: 245 AVHIAVYYVGMILVDNQERMPANTSYRP 272
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
Q +Q++ +I +IGKGG I ++R+ SGA + S+ +P + ERI++V G D +
Sbjct: 104 QTIQMRALIVTQDASIIIGKGGRHINEVREKSGARATI-SEAVPGNAERILSVAGPLDAV 162
Query: 182 SQAI 185
S+A
Sbjct: 163 SKAF 166
>gi|389748653|gb|EIM89830.1| hypothetical protein STEHIDRAFT_118925 [Stereum hirsutum FP-91666
SS1]
Length = 304
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 91/181 (50%), Gaps = 30/181 (16%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSS 74
MRCL + + S +IG G V +R++SGA++ +++ P+RI+ VSG +D
Sbjct: 1 MRCL----IVTQDASIIIGKAGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLDA-- 54
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
V A+ + R + D + + + + +K +IP +
Sbjct: 55 --------------------VSKAFGLIVRRINDEPFDVPSVPGS--RAVTIKFMIPNSR 92
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
GS+IGK G KIK+I+D SGA + + MLP STER+++V G D I A Y I +LIE
Sbjct: 93 MGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVADAIHIATYYIGNILIE 152
Query: 195 C 195
Sbjct: 153 A 153
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK GS++ EI+ SGA++N G S +++ + G +
Sbjct: 78 GSRAVTIKFMIPNSRMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 137
Query: 342 AVSLAQYLI-NMCIELQK 358
A+ +A Y I N+ IE Q+
Sbjct: 138 AIHIATYYIGNILIEAQE 155
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 88/206 (42%), Gaps = 42/206 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T++ + +S + +IG G ++ ++ SGA+++ ++G P +R+++V+G D
Sbjct: 82 VTIKFMIPNS----RMGSVIGKQGSKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 137
Query: 72 NSSTSSVETGYPGHTL-----WVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQPL 124
+ T Y G+ L + S ++Y RS ++ + + S +
Sbjct: 138 ---AIHIATYYIGNILIEAQERMPSAGTAMSSYRPSNRSTTRSTPYVGSSYVPGYSNPYV 194
Query: 125 QL---------------KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD------- 162
Q ++ IP G +IGKGG KI +IR +S + +++
Sbjct: 195 QTAPPAPGNPPPQIQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGAGAGGV 254
Query: 163 ---MLPMSTERIVTVHGNPDTISQAI 185
P ER+V + G P I A+
Sbjct: 255 NPAPAPGEGERLVVITGPPANIQMAV 280
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+I + +D+ GC+IGK GS++ EIR +S +QI I
Sbjct: 212 QIYIPNDLVGCIIGKGGSKINEIRHMSASQIKI 244
>gi|448538474|ref|XP_003871504.1| Pbp2 RNA binding protein [Candida orthopsilosis Co 90-125]
gi|380355861|emb|CCG25380.1| Pbp2 RNA binding protein [Candida orthopsilosis]
Length = 579
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 91/189 (48%), Gaps = 34/189 (17%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E S ++G G + LR+++ KI I+D P+RI+TV G+ +N
Sbjct: 199 VKEASTVVGKQGAKINHLREKADVKIQISDNLRGVPERIITVRGTAEN------------ 246
Query: 85 HTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
V A+ + R++ ED N S Q LKL++P G +IG
Sbjct: 247 ----------VARAFGLIVRTILGEPEDVPAN------LSSQQYNLKLLVPNAIIGYIIG 290
Query: 141 KGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
K G K ++I + S A ++ A LP ST+R+++V G D I A+Y I V+IE +
Sbjct: 291 KQGLKFREIEENSAAKLKAAEQPLPHSTDRVLSVLGVADAIHIAVYFIAEVVIEHKDVLK 350
Query: 201 KGAVIPYEP 209
KG VI Y P
Sbjct: 351 KGRVILYNP 359
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P + ++ P +++GK G KI +R+ + +Q+ SD L ERI+TV G
Sbjct: 186 SDPSYVSFRMYCPVKEASTVVGKQGAKINHLREKADVKIQI-SDNLRGVPERIITVRGTA 244
Query: 179 DTISQAIYQICLVLI 193
+ +++A I ++
Sbjct: 245 ENVARAFGLIVRTIL 259
>gi|149236583|ref|XP_001524169.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452545|gb|EDK46801.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 733
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 113/248 (45%), Gaps = 41/248 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D+ + I++R + V E S ++G G + LR+++ +I +++ P+RIVTV
Sbjct: 329 DDASFISVRII----CPVKEASTIVGKQGSKINHLREKANVRIQVSENIRDVPERIVTVR 384
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
G+ +N + AY + R++ + N + Q LK
Sbjct: 385 GTPEN----------------------IARAYGLIVRTI--LSEPEDEPANINSQQYTLK 420
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+IP G LIGK G K ++I + S A ++ A LP ST+R+++V G D I A+Y
Sbjct: 421 LLIPHALIGFLIGKQGSKFREIEENSAAKLKAAEQPLPYSTDRVLSVSGVGDAIHIAVYY 480
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
+ L+L + + K VI Y P N P GG A LH P + P
Sbjct: 481 LSLLLNDHQDVLKKHKVILYNP--ANYRP---EGGHANDLHQHQRPP------RYHQQPP 529
Query: 248 AGLAVLGI 255
+GL+ G+
Sbjct: 530 SGLSQYGM 537
>gi|388579892|gb|EIM20211.1| hypothetical protein WALSEDRAFT_33458 [Wallemia sebi CBS 633.66]
Length = 349
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 160/360 (44%), Gaps = 61/360 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D++ +T+R L ++ + S +IG GG + ++R+ SG K+ VSGS
Sbjct: 33 DDNPYLTVRSL----IDTRDASIIIGKGGQNIAKIRETSGIKL------------VVSGS 76
Query: 70 VDNSSTSSVETGYPGHTLWVT-SVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
+ N+ P L T +D V A+ + R++ D N+ + + + LK
Sbjct: 77 IPNN---------PERLLTATGQLDAVSKAFGLVVRTINDEDFNQPSLPGS--KAVTLKF 125
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IP G +IG+ G KIK+I++ SGA + + +LP STER++++ G D + AIY +
Sbjct: 126 AIPNMKMGFIIGRAGAKIKEIQEASGAKISTSDYVLPNSTERVLSIDGVADAVHIAIYHV 185
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
++L + T +P + + G Q+Y Y P A
Sbjct: 186 GMILADQT-------AVPSKER----GDRRRVQNQSYGDTSSYGSPAPYAAAP------- 227
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGD--DFVETEIVLTDDIAGCVIGKA 306
V G+ ++++ A A L G+ GG T + +I + +++ G +IGK
Sbjct: 228 --PVYGMLPTYASTVPGPAPAQLGGA-PPFGGYPTLPVAETTSQKIYVPNNLVGGLIGKG 284
Query: 307 GSRLLEIRQISGAQINI-------HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
GS++ +IR S I I T S +++ I G + +A INM E+ N
Sbjct: 285 GSKINQIRYTSQCSIKILEPGEGEQTEGPSIERLVLISGPASGIQIA---INMLSEVSNN 341
>gi|195348691|ref|XP_002040881.1| GM22416 [Drosophila sechellia]
gi|194122391|gb|EDW44434.1| GM22416 [Drosophila sechellia]
Length = 302
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 122/268 (45%), Gaps = 46/268 (17%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L ++L++ GS+IGK G + R+ SGA + ++ P ERIVTV G + I
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTVSGTTNAIFS 80
Query: 184 AIYQICLVLIECTLQV---------VKGAVIPY----------------EPKTMNAGPVI 218
A I E ++V V IP EP+ P +
Sbjct: 81 AFTLITKKFEEVCVRVCSQFNDVGKVGKTQIPIRLIVPGQSMWNCLMAPEPQRRRCTPNL 140
Query: 219 LSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE-----GIGSTSLTPAALAALSG 273
+ T VP+ E K LA L + G+ GI T AALAAL+G
Sbjct: 141 IQSNPFRTF-----VPLCEQVAKNPLASLAALGLAGMNPASTGGINHT----AALAALAG 191
Query: 274 SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH--- 330
S++++ + E+ +++D+ GC+IGK G+++ EIRQISGA I I E
Sbjct: 192 SQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGN 251
Query: 331 -KKMFHIQGCQEAVSLAQYLINMCIELQ 357
+ I G ++V+LAQYLINM I ++
Sbjct: 252 TDRTITISGNPDSVALAQYLINMRISME 279
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 54/99 (54%), Gaps = 15/99 (15%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGS 69
D +T+R + E+ +IG G IV R R+ESGAKI+I+DG+CP+RIVTVSG
Sbjct: 19 DPSVTLTIRLIMQGK----EVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSG- 73
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED 108
+T+++ + + TL + VC +C D
Sbjct: 74 ----TTNAIFSAF---TLITKKFEEVCVR---VCSQFND 102
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
Q Q ++ + G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD
Sbjct: 204 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 263
Query: 180 TISQAIYQI 188
+++ A Y I
Sbjct: 264 SVALAQYLI 272
>gi|402221820|gb|EJU01888.1| hypothetical protein DACRYDRAFT_22325 [Dacryopinax sp. DJM-731 SS1]
Length = 355
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 160/359 (44%), Gaps = 54/359 (15%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSV 70
++T+R L V+ + +IG G V LR+ +G K ++ P +R+++V+G V
Sbjct: 27 ILTLRAL----VSTKDAGIIIGKAGRNVADLRESTGVKAGVSK-VVPGVHERVLSVTGPV 81
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL------EDYHINRNRMENCSPQPL 124
+ V AY + L L
Sbjct: 82 EA----------------------VAKAYTLIASQLLSPPAPPSPPQTPPPSPPNQASTL 119
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L+I G+LIG+ G KIK I+D SG + A +MLP STER+V V G+ ++I +A
Sbjct: 120 TLRLLISHNLMGTLIGRSGLKIKSIQDASGVRMVAAKEMLPQSTERVVEVIGDAESIGRA 179
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
+ ++ L+E + V G V+ Y P + + HG V + G+
Sbjct: 180 VEEVGRCLVEDWERGV-GTVL-YHPGAAVDPSLAMQ-------HGASHVSPRRTNGQAPA 230
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE-IVLTDDIAGCVI 303
+G + IG T AA S S + G+ + T+ I + D+ GC+I
Sbjct: 231 FGTSGRR----QSIGQQ--TSLPAAAASVLAPASPTSNAGNQPIRTQNISIPSDMVGCII 284
Query: 304 GKAGSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
G+ G+++ EIR++SG++I+I E+ ++MF I G E+ A +L+ +E +K
Sbjct: 285 GRGGAKITEIRRLSGSKISIAKQPHDETGERMFTITGTGESNEKALFLLYNQLEGEKER 343
>gi|170592745|ref|XP_001901125.1| KH domain containing protein [Brugia malayi]
gi|158591192|gb|EDP29805.1| KH domain containing protein [Brugia malayi]
Length = 354
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 75/351 (21%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVT 65
DGK + L+T R +IG G V+ ++ E A +S+ D P+R+V
Sbjct: 64 DGKYELRLLVTSRGA----------GAIIGKKGESVKNIQTECDATVSVPDSQTPERVVQ 113
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
+ V +V+NV + +++ H N+NR +
Sbjct: 114 L----------------------VAAVENVVKCVEMIIARIDEVHDNQNRDS-------E 144
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
LK+++ +H G++IG+GG +IK++R+ +G +++V S+ P STERI+ ++G P+ I
Sbjct: 145 LKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTERIIQINGKPEKIV--- 201
Query: 186 YQICLVLIECTLQV--VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ 243
CLV I TL+ +KG PYE ++ P++ + EY + +G+
Sbjct: 202 --ACLVTIINTLKEIPIKGPSRPYE--SIFFDPMVAN---------EYGGYAGDHSGR-- 246
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
GI G G P G +T ++ + +++ G +I
Sbjct: 247 ----------GIRGYGPRGRIPLPSYGSVPPAYDDGPLET------AQVTVPNELGGTII 290
Query: 304 GKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
G+ G R+ IR SGA I I + +++ I G + +AQ+L+ C+
Sbjct: 291 GRGGERIRRIRDESGAHIKIEEEDPNGERIITISGTPSQIEMAQFLLQQCV 341
>gi|171687621|ref|XP_001908751.1| hypothetical protein [Podospora anserina S mat+]
gi|170943772|emb|CAP69424.1| unnamed protein product [Podospora anserina S mat+]
Length = 500
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 33/216 (15%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 130 DETAWIHIRAVISSP----EAATIIGKGGENVSKIRQSSGAKCTVSDYQKGAV-ERILTV 184
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + ++ ++ PL
Sbjct: 185 SGVVDAA----------------------AKAFGLIIRTLNNEPLSEPSNQHSKTYPL-- 220
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP S+ER + V G D + A Y
Sbjct: 221 RLLIPHVLIGSIIGKGGSRIKEIQEASGARLNASDSCLPASSERSLVVTGVADAVHIATY 280
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGG 222
+ L+E + GA T + GP ++GG
Sbjct: 281 YVGSTLLEQLNERFGGAAASAY-ATRSGGPAAVTGG 315
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQISG+ I I+ + S++++ I G E +A Y+
Sbjct: 429 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTDECNKMALYM 488
Query: 350 INMCIELQKN 359
+ +E +K+
Sbjct: 489 LYTRLENEKH 498
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ ++ IP G++IGKGG KI +IR +SG+ +++ ++ S ER+VT+ G +
Sbjct: 425 PMTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTDECNK 483
Query: 183 QAIYQICLVL 192
A+Y + L
Sbjct: 484 MALYMLYTRL 493
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
G +IGK GSR+ EI++ SGA++N S ++ + G +AV +A Y + + Q
Sbjct: 230 GSIIGKGGSRIKEIQEASGARLNASDSCLPASSERSLVVTGVADAVHIATYYVGSTLLEQ 289
Query: 358 KN 359
N
Sbjct: 290 LN 291
>gi|408389667|gb|EKJ69103.1| hypothetical protein FPSE_10721 [Fusarium pseudograminearum CS3096]
Length = 474
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 108 DETSWIHVRAVISSP----EAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAV-ERILTV 162
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + +N + + PL
Sbjct: 163 SGIVDA----------------------VAKAFGLIIRTLNNEPLNESSTASSKTYPL-- 198
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LPMS+ER + V G D + A Y
Sbjct: 199 RLLIPHILIGSIIGKGGARIREIQDASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 258
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 259 YVGSTLLE 266
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
+ +I + +D+ G +IGK G ++ EIRQ+S + I I+ + S++++ I G +E +A
Sbjct: 397 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNSNERLVTITGTEECNRMA 456
Query: 347 QYLINMCI-ELQKNNTTN 363
Y++ + E+Q ++TN
Sbjct: 457 LYMLYSRLGEVQNKSSTN 474
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ ++ IP G++IGKGG KI +IR +S + +++ ++ S ER+VT+ G +
Sbjct: 396 PITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKI-NEPQDNSNERLVTITGTEECNR 454
Query: 183 QAIYQICLVLIEC 195
A+Y + L E
Sbjct: 455 MALYMLYSRLGEV 467
>gi|388854780|emb|CCF51673.1| related to PBP2-PAB1 binding protein [Ustilago hordei]
Length = 446
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 98/192 (51%), Gaps = 30/192 (15%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
GD + T I+MR L +S + S +IG G + +R +S A+++I++ P+R
Sbjct: 130 GDSSETQATQISMRTLIVTS----DASIIIGKSGKHINEIRDKSNARLNISEIIPGNPER 185
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
I+TVSG +D V A+ + R + D ++ + +
Sbjct: 186 ILTVSGPLDA----------------------VSKAFGLIVRRINDEPFDQPSVPGS--K 221
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
+ ++ ++P + GS+IGK G KIK+I++ SGA + MLP STER++++ G D +
Sbjct: 222 SVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGVADAVH 281
Query: 183 QAIYQICLVLIE 194
A+Y + +L+E
Sbjct: 282 IAVYYVGTILLE 293
>gi|255732373|ref|XP_002551110.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131396|gb|EER30956.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 576
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 34/210 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D+ T ++ R V E S ++G G + LR+++ +I+++D P+RIVTV
Sbjct: 174 DDPTFVSFRMY----CPVKEASAIVGKKGETISHLREKAAVRITVSDNLKGVPERIVTVK 229
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-- 125
G +N V A+ + R + +N E S LQ
Sbjct: 230 GPAEN----------------------VARAFGLITRVI----LNEPEDEPASINSLQYN 263
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
LKL+IP G +IGK G K ++I + S A ++ A LP ST+R+++V G D I A+
Sbjct: 264 LKLLIPHPLIGFIIGKSGLKFREIEENSAAKLKAAETPLPYSTDRVLSVMGVGDAIHIAV 323
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAG 215
Y I V++E + K +I Y P+ G
Sbjct: 324 YYISQVILEHQEVLKKNKIILYNPENNRYG 353
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 146/351 (41%), Gaps = 69/351 (19%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG GG + +L+KE+GA I + S + YPG T V V
Sbjct: 55 IIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCLV 93
Query: 93 DNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGSL 138
A N F+ + + + E + PQ Q KL++P + G +
Sbjct: 94 QGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 153
Query: 139 IGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECTL 197
IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 154 IGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED-- 211
Query: 198 QVVKGAVIPYEPKTMN------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
P +N AGPV S YA P + A
Sbjct: 212 --------PQSSSCLNISYANVAGPVANSN----PTGSPYASPADVLPAAAAASAAAASG 259
Query: 252 VLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
+LG G+ PAAL A SG+ D + V EI + +++ G ++GK G L+
Sbjct: 260 LLGPAGLAGVGAFPAALPAFSGT-------DLAKELV--EIAVPENLVGAILGKGGKTLV 310
Query: 312 EIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E ++++GA+I I E + + I G A AQYLI+ + ++
Sbjct: 311 EYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQ 361
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 101
>gi|46108346|ref|XP_381231.1| hypothetical protein FG01055.1 [Gibberella zeae PH-1]
Length = 448
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 94/188 (50%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 108 DETSWIHVRAVISSP----EAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAV-ERILTV 162
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + +N + PL
Sbjct: 163 SGIVDA----------------------VAKAFGLIIRTLNNEPLNEPSTASSKTYPL-- 198
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LPMS+ER + V G D + A Y
Sbjct: 199 RLLIPHILIGSIIGKGGARIREIQDASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 258
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 259 YVGSTLLE 266
>gi|170084019|ref|XP_001873233.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650785|gb|EDR15025.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 318
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 159/352 (45%), Gaps = 54/352 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R L V+ + +IG G V LR+++G K ++ +R++TV+G V+
Sbjct: 1 LTLRAL----VSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVTGPVEA 56
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ--LKLVI 130
V AY + L + + + SP L ++L+I
Sbjct: 57 ----------------------VAKAYTLIISQLVISNPSSPVTPSSSPSSLHTSIRLLI 94
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
G++IG+ G KIK I+D SGA + + +MLP STER+V V G+P+ I +A+ +I
Sbjct: 95 SHNLMGTIIGRSGLKIKAIQDGSGARMVASKEMLPQSTERVVEVQGSPEAIGRAVEEIGK 154
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
L+E + + G V+ + P T + SGG HG P A
Sbjct: 155 CLLEDWERGL-GTVL-FNPGTGDD----RSGGNRRGGHGYSGSYSGSRRSNGDAAPRART 208
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
G + P + A+ T + I + D+ GC+IG++G+++
Sbjct: 209 PPPG------SPTQPQSPAS----------SQTAANLRTQNISIPSDMVGCIIGRSGTKI 252
Query: 311 LEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
EIR++SG++I+I ++ ++MF I G EA A +L+ +E +K
Sbjct: 253 TEIRRLSGSKISIAKTPHDDTGERMFTIVGTPEANEKALFLLYNQLESEKER 304
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 152/374 (40%), Gaps = 88/374 (23%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPG 84
V+ +IG GG ++RLR E A + + D P+R+ TV
Sbjct: 56 VSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTV------------------ 97
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
T +V N+ + + R LED R+ P ++++++ +H G+LIG+ G
Sbjct: 98 -TADEKTVLNILK--DVLPR-LEDNFSERD--------PCEVRMLVHQSHAGALIGRNGS 145
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
KIK++R+ A +++ + P ST+R++ G + I ++ L E +KG+
Sbjct: 146 KIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIP---IKGSA 202
Query: 205 IP------YEPKTM-----------------NAGP-------------------VILSGG 222
P Y+P + N GP + GG
Sbjct: 203 TPYLPAFNYDPSNISDYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGG 262
Query: 223 QAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
Q G++ Q+ G P P+ G A + + P + + G
Sbjct: 263 QRSFEAGDF----QQFRGG--PGPVPGYA------MSAPGYPPQQGQFGAPNNAGYGYGP 310
Query: 283 TGDDFVET-EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQE 341
G V T ++ + D+ G +IG+ G R+ IRQ SGAQI + +++ I+G ++
Sbjct: 311 GGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQ 370
Query: 342 AVSLAQYLINMCIE 355
+ AQYL+ C+
Sbjct: 371 QIHSAQYLLQQCVR 384
>gi|302414660|ref|XP_003005162.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261356231|gb|EEY18659.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 478
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 110 DETAWIHIRAVISSP----EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAV-ERILTV 164
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD S A+ + R+L + ++ PL
Sbjct: 165 SGVVDAS----------------------AKAFGLIIRTLNNEPLDEPSSAQSKTYPL-- 200
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMSTER + V G D + A Y
Sbjct: 201 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSTERSLVVMGVADAVHIATY 260
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 261 YVGSTLLE 268
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
QPL ++ IP G++IGKGG KI +IR +SG+ +++ ++ S ER+VT+ G +T
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTDETN 459
Query: 182 SQAIYQICLVL 192
A+Y + L
Sbjct: 460 RMALYMLYSRL 470
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQISG+ I I+ + S++++ I G E +A Y+
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTDETNRMALYM 465
Query: 350 I 350
+
Sbjct: 466 L 466
>gi|134079139|emb|CAK45951.1| unnamed protein product [Aspergillus niger]
Length = 421
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 103 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D + A+ + R+L + ++ PL
Sbjct: 158 SGPQDAA----------------------AKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 193
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + + G D + A Y
Sbjct: 194 RLLIPHILIGSIIGKGGSRIREIQDASGARLNASDACLPLSTERSLVILGVADAVHIATY 253
Query: 187 QICLVLIE 194
+ + L+E
Sbjct: 254 YVAVTLVE 261
>gi|346979418|gb|EGY22870.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 477
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 110 DETAWIHIRAVISSP----EAATVIGKGGENVSNIRKMSGAKCTVSDYQKGAV-ERILTV 164
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD S A+ + R+L + ++ PL
Sbjct: 165 SGVVDAS----------------------AKAFGLIIRTLNNEPLDEPSSAQSKTYPL-- 200
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMSTER + V G D + A Y
Sbjct: 201 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSTERSLVVMGVADAVHIATY 260
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 261 YVGSTLLE 268
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
QPL ++ IP G++IGKGG KI +IR +SG+ +++ ++ S ER+VT+ G +T
Sbjct: 401 QPLTQQIFIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTDETN 459
Query: 182 SQAIYQICLVL 192
A+Y + L
Sbjct: 460 RMALYMLYSRL 470
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQISG+ I I+ + S++++ I G E +A Y+
Sbjct: 406 QIFIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTDETNRMALYM 465
Query: 350 INMCIELQKN 359
+ +E +K+
Sbjct: 466 LYSRLESEKH 475
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/373 (23%), Positives = 152/373 (40%), Gaps = 88/373 (23%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPG 84
V+ +IG GG ++RLR E A + + D P+R+ TV
Sbjct: 39 VSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTV------------------ 80
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
T +V N+ + + R LED R+ P ++++++ +H G+LIG+ G
Sbjct: 81 -TADEKTVLNILK--DVLPR-LEDNFSERD--------PCEVRMLVHQSHAGALIGRNGS 128
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
KIK++R+ A +++ + P ST+R++ G + I ++ L E +KG+
Sbjct: 129 KIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIP---IKGSA 185
Query: 205 IP------YEPKTM-----------------NAGP-------------------VILSGG 222
P Y+P + N GP + GG
Sbjct: 186 TPYLPAFNYDPSNISDYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGG 245
Query: 223 QAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKD 282
Q G++ Q+ G P P+ G A + + P + + G
Sbjct: 246 QRSFEAGDF----QQFRGG--PGPVPGYA------MSAPGYPPQQGQFGAPNNAGYGYGP 293
Query: 283 TGDDFVET-EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQE 341
G V T ++ + D+ G +IG+ G R+ IRQ SGAQI + +++ I+G ++
Sbjct: 294 GGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQ 353
Query: 342 AVSLAQYLINMCI 354
+ AQYL+ C+
Sbjct: 354 QIHSAQYLLQQCV 366
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 162/386 (41%), Gaps = 72/386 (18%)
Query: 8 KIDEDTL-ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIV 64
+I++D + + M CL V + S ++GPGG + R+++E+ +I+++D P+R++
Sbjct: 50 EINKDYIHLRMLCL------VKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVI 103
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL 124
+ G ++ V + + R++ + ++ + L
Sbjct: 104 FIRGRCED----------------------VAKVFGMVVRAINGETDGESSEQSAT---L 138
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L ++IP G +IG+ G ++++I +LS A + LPMS +RI+ V G D I A
Sbjct: 139 TLNILIPHHMMGCVIGRQGSRLREIEELSAAKLMAGPQTLPMSNDRILCVSGVADAIHIA 198
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
Y + ++ I Y P +++ V+++ H + GKK+
Sbjct: 199 TYYVGQTILNHKATFASKKCIFYLPSLLHS--VLVNSYGVSLQHQQQHQYRPGENGKKRL 256
Query: 245 H-----PLAGLAVLGI--------------EGIGSTSLTPAALAALSGSRVKSGGKDTGD 285
H P G A G+ + + + ++ PA LS
Sbjct: 257 HRYSASPDFGYAYPGVPSAPHMAVHNVRVADTLAAATIPPALAPQLS------------- 303
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE--SHKKMFHIQGCQEAV 343
++ E+ + D+ G VIGK G + I++ +G I I E S +K+ I+G
Sbjct: 304 -LIQQEVYIDDNYVGNVIGKGGKHINSIKETTGCSIQIDDHVEGCSERKIL-IRGTPIGS 361
Query: 344 SLAQYLINMCIELQKNNTTNTSDNPE 369
A LIN IE+ + N + D E
Sbjct: 362 QTAILLINNKIEMDRRNKQSIGDKLE 387
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 175/414 (42%), Gaps = 83/414 (20%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--AC 59
D NG G EDT+ C V + +IG GG I +++R E+ A + I + C
Sbjct: 9 DNNGAGL--EDTVYRYLC------PVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGC 60
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCR--------SLEDYHI 111
+R+VT+ ++ T+ +E D VC A++ + + ++
Sbjct: 61 DERVVTIYS--NSEETNRIED----------DEDFVCPAFDALFKVHDMIVAEEFDNDGD 108
Query: 112 NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP-----M 166
N E Q + +++++P+ G LIGKGG I+ +R+ + A ++V +D LP +
Sbjct: 109 YDNGDEYSERQTVTVRMLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVINDNLPICALAL 168
Query: 167 STERIVTVHGNPDTISQAIYQICLVLIE--CTLQ---VVKGAVIPYEPKTMNAGPVILSG 221
S + ++ + G+P + +A+YQ+ +L + Q + + + ++P + P I S
Sbjct: 169 SHDELLQIIGDPSAVREALYQVAFLLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITSS 228
Query: 222 GQAYTLHGE----------YAVPVQEVAGK--------KQPHPLAG-------------- 249
+ Y+ + + P + V G Q +G
Sbjct: 229 HKNYSAPRDAADARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDD 288
Query: 250 ---LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
+ + E S T A L + GKD+ D + T +++ GC+IGK
Sbjct: 289 DCIIFISAKEFFEDQSPTVNAALRLQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKG 348
Query: 307 GSRLLEIRQISGAQINIHTGTE------SHKKMFHIQGCQEAV--SLAQYLINM 352
G+ + E+R ++ A I I G + +++M I G +A +L Q ++ +
Sbjct: 349 GALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRL 402
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 40/195 (20%)
Query: 33 LIGPGGCIVRRLRKESGAKISI------TDGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GGC + + R+ESGA I + D C I+ +S
Sbjct: 258 VIGKGGCFINQTRQESGATIKVHTPETDEDDDC---IIFISAK----------------E 298
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ V A R E ++ S + +++IP++ G LIGKGG I
Sbjct: 299 FFEDQSPTVNAALRLQTRCSEKVG------KDSSDSAISTRVLIPSSQVGCLIGKGGALI 352
Query: 147 KDIRDLSGANVQVAS----DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKG 202
++R ++ AN+++ + E +V + G+ D +A+ Q+ L L + +G
Sbjct: 353 SEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANVFDMDRG 412
Query: 203 AVI-----PYEPKTM 212
V+ PY +T+
Sbjct: 413 LVLLPTFFPYISQTI 427
>gi|312085525|ref|XP_003144713.1| hypothetical protein LOAG_09137 [Loa loa]
Length = 327
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 148/325 (45%), Gaps = 65/325 (20%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG G V+ ++ E A +S+ D P+R+V + V +
Sbjct: 53 AIIGKKGESVKNIQAECDATVSVPDSQTPERVVQL----------------------VAT 90
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
V+NV + +++ H N++R +LK+++ +H G++IG+GG +IK++R+
Sbjct: 91 VENVVRCVEMIIARIDEVHDNQDRDS-------ELKVLVHQSHAGAVIGRGGSRIKELRE 143
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV--VKGAVIPYEP 209
+G +++V S+ P STERI+ ++G P+ I CLV I TL+ +KG PYE
Sbjct: 144 ENGVDLKVYSECCPQSTERIIQINGKPEKIV-----ACLVTIISTLKEIPIKGPSRPYE- 197
Query: 210 KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALA 269
++ PV+ + EY + G+ G+ G G S P
Sbjct: 198 -SIFFDPVVAN---------EYGGYAGDHGGR------------GMRGYGPRSRIPLPPY 235
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES 329
G +T ++ + +++ G +IG+ G R+ IR SGA I I +
Sbjct: 236 GPVPPAYDDGPLET------AQVTVPNELGGTIIGRGGERIRRIRDESGAHIKIEEEDPN 289
Query: 330 HKKMFHIQGCQEAVSLAQYLINMCI 354
+++ I G + +AQ+L+ C+
Sbjct: 290 GERIITISGTPSQIEMAQFLLQQCV 314
>gi|342880970|gb|EGU81981.1| hypothetical protein FOXB_07505 [Fusarium oxysporum Fo5176]
Length = 471
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 106 DETSWIHIRAVISSP----EAATVIGKGGENVSNIRKLSNAKCTVSDYQKGAV-ERILTV 160
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + +N + + PL
Sbjct: 161 SGIVDA----------------------VAKAFGLIIRTLNNEPLNESSTASSKTYPL-- 196
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 197 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 256
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 257 YVGSTLLE 264
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ ++ IP G++IGKGG KI +IR +S + +++ ++ S ER+VT+ G +
Sbjct: 393 PITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKI-NEPQDNSNERLVTITGTEECNR 451
Query: 183 QAIYQICLVLIEC 195
A+Y + L E
Sbjct: 452 MALYMLYSRLGEV 464
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
+ +I + +D+ G +IGK G ++ EIRQ+S + I I+ + S++++ I G +E +A
Sbjct: 394 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSNSVIKINEPQDNSNERLVTITGTEECNRMA 453
Query: 347 QYLI 350
Y++
Sbjct: 454 LYML 457
>gi|317032830|ref|XP_001394456.2| KH domain RNA binding protein [Aspergillus niger CBS 513.88]
Length = 444
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V ++R+ SGAK +++D GA +RI+TV
Sbjct: 103 DESSWIHIRAVISS----QEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAV-ERILTV 157
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG D + A+ + R+L + ++ PL
Sbjct: 158 SGPQDAA----------------------AKAFGLIIRTLNNEPLDAPSTAQSKTYPL-- 193
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I+D SGA + + LP+STER + + G D + A Y
Sbjct: 194 RLLIPHILIGSIIGKGGSRIREIQDASGARLNASDACLPLSTERSLVILGVADAVHIATY 253
Query: 187 QICLVLIE 194
+ + L+E
Sbjct: 254 YVAVTLVE 261
>gi|156030905|ref|XP_001584778.1| hypothetical protein SS1G_14233 [Sclerotinia sclerotiorum 1980]
gi|154700624|gb|EDO00363.1| hypothetical protein SS1G_14233 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 487
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S+ E + +IG GG V +RK SGAK +++D GA +RI+TV
Sbjct: 122 DESGWIHVRSVITSA----EAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAV-ERILTV 176
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + N PL
Sbjct: 177 SGVVDA----------------------VAKAFGLIIRTLNNEPLEAPSDSNSKTYPL-- 212
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 213 RLLIPHILIGSIIGKGGVRIREIQEASGARLNASDSYLPLSTERSLVVLGVADAVHIATY 272
Query: 187 QICLVLIE 194
+ L E
Sbjct: 273 YVGSTLFE 280
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
QPL ++ IP G++IGKGG KI +IR LSG+ +++ ++ S ER+VT+ G +
Sbjct: 409 QPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI-NEPQDNSNERLVTITGTAECN 467
Query: 182 SQAIYQICLVL 192
A+Y + L
Sbjct: 468 QMALYMLYSRL 478
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G+++ EIRQ+SG+ I I+ + S++++ I G E +A Y+
Sbjct: 414 QIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLVTITGTAECNQMALYM 473
Query: 350 INMCIELQKNNTTN 363
+ +E +++ ++
Sbjct: 474 LYSRLENERHRASS 487
>gi|388582172|gb|EIM22478.1| eukaryotic type KH-domain (KH-domain type I) [Wallemia sebi CBS
633.66]
Length = 319
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 158/361 (43%), Gaps = 79/361 (21%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVS 67
DE +T+R L V+ E +IG GG V LR+ +G K ++ +R+++++
Sbjct: 16 DEIDTLTLRAL----VSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHERVLSIT 71
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-- 125
GS TS++ A++ + +++ D +N S PLQ
Sbjct: 72 GS-----TSAI-----------------ADAFSIIAQTILDNPLN------PSTAPLQSP 103
Query: 126 ------LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
++L+I G++IG+ G KIK I+D SG + + ++LP STERIV V G +
Sbjct: 104 PSATTAIRLLISHNLMGTVIGRQGIKIKQIQDTSGVRMVASKELLPQSTERIVEVQGTVE 163
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
+I AI I L+E G ++ Y P N + S ++ +V
Sbjct: 164 SIHIAINDIAKCLLE-DWDRYSGTIL-YTPAPPNEHSLFNSSFNNSSIRSINSV------ 215
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA 299
++P + SL +AL R D I + D+
Sbjct: 216 --RRP-----------DNFNMQSLN----SALPQPR----------DVRTQHISIPSDMV 248
Query: 300 GCVIGKAGSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
G +IG+AGSR+ EIR++S A+I I E+ +++F I G EA A L+ +E +
Sbjct: 249 GPIIGRAGSRISEIRRLSTAKIIIAKQPHDETGERLFTIIGTPEANEKALILLYSQLENE 308
Query: 358 K 358
K
Sbjct: 309 K 309
>gi|45198501|ref|NP_985530.1| AFL018Cp [Ashbya gossypii ATCC 10895]
gi|44984452|gb|AAS53354.1| AFL018Cp [Ashbya gossypii ATCC 10895]
gi|374108759|gb|AEY97665.1| FAFL018Cp [Ashbya gossypii FDAG1]
Length = 392
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 154/372 (41%), Gaps = 44/372 (11%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDR 62
G +I + + M CL V + S ++G G + R++ E+G +I++++ P+R
Sbjct: 40 GAARISDYIHMRMLCL------VKDASMVVGHKGERISRIKLETGTRINVSENIKNVPER 93
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
+V + GS +N V A+ + R++ D +R N
Sbjct: 94 VVFLRGSCEN----------------------VAKAFGKISRAIND---EDDRESNDRSL 128
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
PL + L++P G +IGK G ++++I DLS A + LP+S +R++ + G D I
Sbjct: 129 PLTVNLLVPHHLMGYVIGKQGSRLREIEDLSAARLVAGPQQLPLSNDRVLCITGVADAIH 188
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTM------NAGPVILSGGQAYTLHGEYAVPVQ 236
A Y + ++ C + I Y+P M N G I G+ A +
Sbjct: 189 IATYYVGQTILSCEPKYRARKTIFYQPSAMHSVLVNNYGIAIQHQQHHQYHPGDKAKRSR 248
Query: 237 EV---AGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-GKDTGDDFVETEI 292
A P+ + + L + SL A AL R+ G T V EI
Sbjct: 249 SRMSPALPPTPNEVVFHSYLPLGAPVPGSLAVANNLALPHVRIVEGINPQTRITSVVQEI 308
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ + + G VIG+ G + +I++ +G I I ++ I G A +IN
Sbjct: 309 FIEELMVGNVIGRGGKNITQIKESTGCSIQIADPVPGKDERKLTIIGTPIGNQTAVMMIN 368
Query: 352 MCIELQKNNTTN 363
I++ K N N
Sbjct: 369 NKIDIDKRNQHN 380
>gi|392578180|gb|EIW71308.1| hypothetical protein TREMEDRAFT_42752 [Tremella mesenterica DSM
1558]
Length = 299
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 30/180 (16%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSS 74
MRCL + + S +IG GG V +R+ S A++++++ P+RI+ VSG +D
Sbjct: 1 MRCL----IVTQDASIIIGKGGAHVNDIRERSHARVTVSESIPGNPERILNVSGPLDA-- 54
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
V A+ + R + D + + + + +K +IP +
Sbjct: 55 --------------------VAKAFGLIVRRINDEPFDVASVPGS--RAVTIKFIIPNSR 92
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
GS+IGK G KIK+I++ SGA + + MLP STER+++ G D I A+Y I +L+E
Sbjct: 93 MGSVIGKQGAKIKEIQEASGARLNASESMLPGSTERVLSCSGVADAIHIAVYYIGTILLE 152
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 121 PQPLQLK-LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST-------ERIV 172
P +Q++ + IP + G++IGKGG KI +IR S ++V P ER+V
Sbjct: 208 PPGMQMQQIFIPNSLVGAIIGKGGAKINEIRTQSQCQIRVTDPGTPAGPGQPVNPDERLV 267
Query: 173 TVHGNPDTISQAI 185
T+ G P I+ A+
Sbjct: 268 TIQGLPQNINIAV 280
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQE 341
G V + ++ + G VIGK G+++ EI++ SGA++N S +++ G +
Sbjct: 78 GSRAVTIKFIIPNSRMGSVIGKQGAKIKEIQEASGARLNASESMLPGSTERVLSCSGVAD 137
Query: 342 AVSLAQYLI-NMCIELQKNNTTNTS 365
A+ +A Y I + +E Q+ N +TS
Sbjct: 138 AIHIAVYYIGTILLEYQERNPGSTS 162
>gi|50292201|ref|XP_448533.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527845|emb|CAG61494.1| unnamed protein product [Candida glabrata]
Length = 460
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 171/394 (43%), Gaps = 60/394 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSG 68
+D + M CL V + S ++GP G + +L++++ KI+++ P+R++ V G
Sbjct: 79 QDISLRMLCL------VKQASIIVGPKGESINKLKEQTSTKINVSPNIRGVPERVIHVKG 132
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
S +N V + + D+ A + N + E+ + L L L
Sbjct: 133 SCEN-----VGKAFGKIARIIIEKDSKNNANQSSSSLDSEASQNSSDAEDTT---LILNL 184
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I GS+IGKGG ++++I + S A + + + L MS +RI+++ G PD I A Y +
Sbjct: 185 LISHALMGSVIGKGGSQLREIEERSAAKLYASPNQLMMSNDRILSITGVPDAIHIATYYV 244
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT-----LHGEYAVPVQEV----- 238
L+ C ++ + I Y+P M + G Q Y +H +Y P+ +
Sbjct: 245 AQSLLNCREELKQRKSIFYQPSQMGSALPNSYGAQMYNKFPHQMHHQYH-PMDKYNTPRN 303
Query: 239 -AGKKQPHPLAGLA---VLGIEG---------------IGSTSLTPAALAALSGSRVKSG 279
+ P P + LA I G I TS A+ + + +R
Sbjct: 304 KKSHRLPRPQSMLANNVPPSINGHAFHDEYMNRPESGQIHYTSANVASAPSFTPTRNIPN 363
Query: 280 GK--DTGDDF---------VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE 328
+ D ++ V+ +I + ++ G +IGK G + +++ +G I I E
Sbjct: 364 VRIVDNPENNMAYSNPIAPVKQDIYIDENFVGNIIGKEGKHINSVKESTGCAIFIDNRIE 423
Query: 329 --SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
S +K+ I+G A+ A LI+ IE+ + N
Sbjct: 424 GVSERKLT-IKGTYMALQAAIMLISNKIEIDRAN 456
>gi|401626761|gb|EJS44683.1| pbp2p [Saccharomyces arboricola H-6]
Length = 416
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 167/377 (44%), Gaps = 56/377 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+ M CL V S ++G G + +++ E+ A+I++++ P+RIV V G+ D+
Sbjct: 72 LRMLCL------VKHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRGTCDD 125
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V AY+ + R+L + H N ++ E+ + + L+IP
Sbjct: 126 ----------------------VAKAYSMIVRALLEEHENEDQEEDIE---VTINLLIPH 160
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G +IGK G ++++I DLS A + + + L +S +RI+T+ G PD I A + I L
Sbjct: 161 HLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTISGVPDAIHIATFYIGQTL 220
Query: 193 IECTLQVVKGAV---IPYEPKTMNAGPVILSGGQA----YTLHGEYAVPVQEVAGKKQPH 245
+ ++ + + I Y+P N+ V++ Q + + +Y ++++G+
Sbjct: 221 LNFQMESPQKKLKRSIFYQPTQFNS--VLIDHSQPNAILHQRNHQYHPNDKQLSGRPNRK 278
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAA------------LSGSRVKSG-GKDTGDDFVETEI 292
L + T+ + A A L GS V SG + V+ EI
Sbjct: 279 FSVSSTFLNMAPPQYTTASVANATAFQPNFVIPNVRILDGSVVNSGISNHLSMNLVQQEI 338
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ ++ G VIGK G + +++ +G I I E + ++ I+G A A LI+
Sbjct: 339 FIDENFVGNVIGKDGKHINSVKESTGCSIIIQDPVECASERRLSIRGTFMASQAAIMLIS 398
Query: 352 MCIELQKNNTTNTSDNP 368
IE+ + N P
Sbjct: 399 NKIEIDRLNAERKRRMP 415
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 155/362 (42%), Gaps = 56/362 (15%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ I +IG GG IVR L+ ESGA +S+ C +R+++++ S ++E+ Y
Sbjct: 313 DRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISITAS------ENIESRYSPA 366
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V V RS+ D I + + + P+ +LV+P+ G ++GKGG
Sbjct: 367 QKAVVLV---------FSRSV-DVAIEKWQESSSKGSPVVARLVVPSNQVGCVLGKGGVI 416
Query: 146 IKDIRDLSGANVQ-VASDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV- 200
I +IR ++G N++ ++SD +P ++ IV + G + A+Y + L + V
Sbjct: 417 ISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDNLFSSVL 476
Query: 201 ------KGAVIPYEPKTMNAGPV-----ILSGGQAYTLHGEY----------------AV 233
G P+T G V ++ T HG + ++
Sbjct: 477 SNSGTRNGGGTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQSSDDLGLSHSL 536
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
G P L+G++ I G + SG ++ SG K EIV
Sbjct: 537 DSPSSPGLWPPQSLSGISSRAISDAGR-----GLPSHRSGVQLGSGNKTAIVTNTTVEIV 591
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ DD+ V G+ G+ L +RQISGA++ +H + ++ I G + AQ L++
Sbjct: 592 VPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIVISGTPDETQAAQSLLHA 651
Query: 353 CI 354
I
Sbjct: 652 FI 653
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 131/316 (41%), Gaps = 36/316 (11%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDN 72
+ R L H+S I +IG G ++++L++ +G KI + + PDR+VTV GS
Sbjct: 53 VAFRMLCHAS----RIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPAL 108
Query: 73 SSTSSVE--TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
+S +E +G G + + R LE + +L+
Sbjct: 109 TSRVFLEQNSGASGEEVEASKAQE--GLLKVFERILEVAAEIEGVEVGAEVGVVYCRLLA 166
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQ 187
GS+IGKGG ++ IR SG ++V +D LP ++ ++ + G+ I +A+
Sbjct: 167 DVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDKLPACAGPSDEMIEIEGDVWAIKKALLA 226
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
+ L +C P E +T+ ++ LH ++ + V L
Sbjct: 227 VSRRLQDCP---------PSEKRTVRPAEAVIHE-TLPDLHMDHILQRNSVLPI-----L 271
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+ + GI S S+ L + + V +I+ +D G VIGK G
Sbjct: 272 PSSSNIFASGIHSLSIDADMLPPVD--------TNVAQQDVVFKILCANDRIGGVIGKGG 323
Query: 308 SRLLEIRQISGAQINI 323
+ + ++ SGA +++
Sbjct: 324 TIVRALQNESGATVSV 339
>gi|296420990|ref|XP_002840050.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636260|emb|CAZ84241.1| unnamed protein product [Tuber melanosporum]
Length = 386
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 102/216 (47%), Gaps = 27/216 (12%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GAC 59
DG+ +G E+ + V+ E +IG G V LR+E+G K ++
Sbjct: 35 DGDHEGARTEEEYAQSPLTLRAIVSSKEAGVIIGKAGKNVADLREETGVKAGVSKVVTGI 94
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
PDR++TV+G +D V AY + ++L D +
Sbjct: 95 PDRVLTVTGPLDG----------------------VAKAYAMVSQTLLDSPPS-TIGGGP 131
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P P L+L+I G++IG+ G KIK I+D+SG + A +MLP STER+V V G+P+
Sbjct: 132 PPGPGTLRLLISHNQMGTIIGRQGLKIKHIQDVSGTRMTAAKEMLPQSTERVVDVAGDPE 191
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAG 215
I AI++I L++ Q G V+ Y P + G
Sbjct: 192 AIRTAIWEIGKCLVD-DWQRGTGTVL-YNPAVRSPG 225
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGC 339
D G++ I + D+ GC+IG+ G+++ +IR+ SGA+I+I ++ ++MF I G
Sbjct: 294 DDGEEIQTQNISIPADMVGCIIGRGGTKIQDIRRSSGARISIAKTPHGDTGERMFTIMGS 353
Query: 340 QEAVSLAQYLINMCIELQKNNTTN 363
+ A YL+ +E +K +N
Sbjct: 354 ASSNEKALYLLYENLEAEKLRRSN 377
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IPA G +IG+GG KI+DIR SGA + +A + ER+ T+ G+ + +A+Y
Sbjct: 304 ISIPADMVGCIIGRGGTKIQDIRRSSGARISIAKTPHGDTGERMFTIMGSASSNEKALY 362
>gi|400603119|gb|EJP70717.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 464
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 102 DETSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 156
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + + PL
Sbjct: 157 SGIVDA----------------------VAKAFGLIIRTLNNEALTETSTASSKTYPL-- 192
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 193 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 252
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 253 YVGSTLLE 260
Score = 46.2 bits (108), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ ++ IP G++IGKGG KI +IR LSG+ +++ ++ S ER+VTV G +
Sbjct: 389 PMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKI-NEPQDNSNERLVTVTGTEECNR 447
Query: 183 QAIY 186
A+Y
Sbjct: 448 MALY 451
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQ+SG+ I I+ + S++++ + G +E +A YL
Sbjct: 393 QIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNSNERLVTVTGTEECNRMALYL 452
Query: 350 INMCIELQKN 359
+ ++ +K+
Sbjct: 453 LYSRLDSEKH 462
>gi|328774304|gb|EGF84341.1| hypothetical protein BATDEDRAFT_8525 [Batrachochytrium
dendrobatidis JAM81]
Length = 343
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 160/367 (43%), Gaps = 78/367 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+T+R L V+ E +IG GG V +R+ + K+ ++ + +RI+TV G + N
Sbjct: 13 MTLRSL----VSTKEAGVVIGKGGASVANVRQIASVKVGVSKVVPSVSERILTVVGPLPN 68
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED--YHINRNRMENCSPQPLQLKLVI 130
V AY + ++L + I N + + + ++L++
Sbjct: 69 ----------------------VAKAYALIAKNLLESTQTITSNGNLDSTEESTAIRLLV 106
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
GS+IGK G KI++I++ SGA + V+ +M+P STER+V ++G D I AIY I +
Sbjct: 107 AHQLIGSIIGKAGAKIREIQEASGAKIVVSKEMMPQSTERVVEIYGLVDAIHIAIYHIGV 166
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
+ + +IPY+P+ + + P +
Sbjct: 167 CMKSDNERA--AGIIPYDPQN---------------------------SLRYDSSPFSSS 197
Query: 251 AVLGI-EGIGSTSLTPA---------------ALAALSGSRVKSGGKDTGDDFVETEIVL 294
A++ G SLT A ++ A+SGS + ++ V+
Sbjct: 198 AIISTSRSTGRNSLTNAIGRRHSSNNSSVSSNSIRAMSGSTFGGAPASSTENPDTRTCVM 257
Query: 295 T--DDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
T D+ GC++GK GS + +IR++SGA++++ + + I G EA A L+
Sbjct: 258 TVQSDMIGCLMGKGGSHITQIRRLSGAKLHVAEQVSGRNDREITIVGTDEANRKAMSLLY 317
Query: 352 MCIELQK 358
+E +K
Sbjct: 318 NKLEAEK 324
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 145/339 (42%), Gaps = 43/339 (12%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ + +IG GG IVR L+ ESGA IS C DR+VT++ S N +
Sbjct: 279 DRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTITASEQNPESRYSPAQKAVV 338
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
++ SV+ M E Y + +LV+P+ G L+GKGG
Sbjct: 339 LVFSKSVEAGVEKGLDMGSKKESY--------------VTAQLVVPSNQVGCLLGKGGAI 384
Query: 146 IKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVK 201
+ ++R +GAN++V +D +P +++V + G + AIY L +
Sbjct: 385 VSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNLFV--- 441
Query: 202 GAVIPYEPKTMNAGPV-----ILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE 256
T N+G +LSGG+ T+ ++ + G + P +AG+
Sbjct: 442 --------STQNSGGARSLSSVLSGGKP-TVAVSLSLNRHSLPGLQAPQTVAGINSRVTN 492
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
G+ S LT + G + SG K +I + DD+ G V G+ GS L +RQI
Sbjct: 493 GV-SRGLT----SQKGGLELVSGSKTAIVTNTTVQIAVPDDVIGSVYGENGSNLARLRQI 547
Query: 317 SGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
SGA++ +H + + I G + AQ L+ I
Sbjct: 548 SGAKVIVHEPRPGTSDRTIIISGTPDETRAAQSLLQAFI 586
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 50/322 (15%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSV 70
T +T R L H+S + +IG G +++ L++ +GAKI I D PDR++ VS
Sbjct: 23 THVTFRLLCHAS----RVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPA 78
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVC-TAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+S V T + D V A + D R+ +C +L+
Sbjct: 79 A-ASDGEVSTA---QVALLKVFDRVLDVAAETAGTEVGD------RVVSC-------RLL 121
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST---ERIVTVHGNPDTISQAIY 186
+ G++IGK G ++ IR +G ++V ++ LP T + IV V G ++ +A+
Sbjct: 122 ADTSQVGAVIGKAGKVVEKIRMDTGCKIRVLNEGLPACTAPSDEIVEVEGQLTSVKKALV 181
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAY-TLHGEY-AVPVQEVAG---K 241
+ L +C P +T ++G + Y + E +VP++ +
Sbjct: 182 AVSGCLQDC----------PPPDRTK------MTGSRHYEVVRSETCSVPLESLTNLHID 225
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGC 301
++ + L+ L G+ S P A + +RV + V I+ ++D G
Sbjct: 226 RRLQRSSTLSTLSNRSNGNASGAPKLSAEV--NRVSALDPKALQQEVTFRIICSNDRVGA 283
Query: 302 VIGKAGSRLLEIRQISGAQINI 323
VIGK GS + ++ SGA I+
Sbjct: 284 VIGKGGSIVRALQNESGAIISF 305
>gi|50545305|ref|XP_500190.1| YALI0A18161p [Yarrowia lipolytica]
gi|49646055|emb|CAG84122.1| YALI0A18161p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/356 (23%), Positives = 151/356 (42%), Gaps = 54/356 (15%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVS 67
D+ T + +R L V+ E +IG G V LR + K +T PDRI++V+
Sbjct: 62 DDTTQLVLRAL----VSTKEAGVIIGKDGATVAGLRDAAKVKAGVTKSVAGIPDRILSVA 117
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP---L 124
G+ V A +L + + + P P
Sbjct: 118 GTAAG----------------------VSRAIGLAAAALVAHPPSGYVLNLVPPGPQGTT 155
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
++L+IP GS++GKGG +IK I+ G + + LP S+ERIV + G P + A
Sbjct: 156 TVRLLIPHQRMGSILGKGGVRIKAIQAKYGVRIVASKHRLPHSSERIVEIQGEPLALQTA 215
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
+Y + L+E + + V Y P+++ E ++ ++E K+
Sbjct: 216 VYTVVQCLLEEKDKSI--LVAYYNPRSL-----------------EGSMTLREDPEDKEY 256
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
AG +G T A + G ++ + D V++ I+ AG +IG
Sbjct: 257 VSFAGYRGRHQDGGSDTDTDREATVSDHGGDAEA--LSSSDACVQSTIIPA-SFAGYIIG 313
Query: 305 KAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+ G + E+R+ SGA I+I + E + + ++G + AV+LA ++ ++ ++
Sbjct: 314 RRGDNIRELRKRSGAAISISSEYERERTLL-MRGSEAAVALAMSMLQQQMDEERER 368
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 102/229 (44%), Gaps = 32/229 (13%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D+ T I +R V E S ++G G + LR+++ +I++++ P+RIV V
Sbjct: 155 DDPTFIQLRMY----CPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVK 210
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRS-LEDYHINRNRMENCSPQPLQL 126
G +N V A+ + R LE+ + + + Q L
Sbjct: 211 GPAEN----------------------VARAFGLITRVILEEP---EDEPASINSQQYNL 245
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
KL+IP G +IGK G K ++I + S A ++ A + LP ST+R+++V G D I A+Y
Sbjct: 246 KLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENALPYSTDRVLSVMGVGDAIHIAVY 305
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV 235
I V++E + K V+ Y P L G Q Y P+
Sbjct: 306 YIAQVMLEHKEVLKKHKVVLYNPANYQPTDQSLGGRQRQPPSNSYNNPM 354
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 114 NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA-SDMLPMSTERIV 172
N + P +QL++ P +++G+ G I +R+ ANV++ S+ L ERIV
Sbjct: 150 NHRDRDDPTFIQLRMYCPVKEASTIVGRKGETINHLRE--KANVRITVSENLKGVPERIV 207
Query: 173 TVHGNPDTISQAIYQICLVLIE 194
V G + +++A I V++E
Sbjct: 208 AVKGPAENVARAFGLITRVILE 229
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 153/362 (42%), Gaps = 57/362 (15%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ + +IG GG IVR L+ E+GA ISI C DR++T++ S + S S P
Sbjct: 320 DRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPESRYS-----PAQ 374
Query: 86 TLWVTSVDNVCTAYNFMCRSLE-------DYHINRNRMENCSPQPLQLKLVIPATHCGSL 138
V RS+E D +N+ + ++LV+P++ G L
Sbjct: 375 KAAVL----------VFSRSIEVGFEKELDSGLNKGST-------VTVRLVVPSSQVGCL 417
Query: 139 IGKGGCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIE 194
IGKGG + +IR +GAN+++ +D +P +++V + G ++ A+Y L +
Sbjct: 418 IGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRD 477
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE--------------YAVPVQEVA- 239
+ + ++ Q + HG +A + +
Sbjct: 478 NLFVSTQNSAGTRSLSSLRVDTSPYGIQQDFVPHGSQLPATTSHCLSRHTFAQGIDHLGL 537
Query: 240 GKKQPHPLA-GLAV--LGIEGIGSTSLTPAALAALS---GSRVKSGGKDTGDDFVETEIV 293
+ HP + GL L + GI S S+ +L S G + SG K EIV
Sbjct: 538 SRNLDHPSSPGLWTRNLDLAGINSRSINDFSLGLTSRKGGLELVSGSKSAIVTNTTVEIV 597
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINM 352
+ DD CV G+ G L+ +RQISGA++ IH + ++ I G + AQ L+
Sbjct: 598 VPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTSDRIIVISGTPDETQAAQSLLQA 657
Query: 353 CI 354
I
Sbjct: 658 FI 659
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 16/182 (8%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSV 78
F N + I +IG G +++ L++ +GAKI I D PDR++ V D + + V
Sbjct: 47 FRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIA--DAALSCKV 104
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME--NCSPQPLQLKLVIPATHCG 136
L V V A + + + ME + + + +LV + G
Sbjct: 105 -------LLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAG 157
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLI 193
S+IGKGG ++ I+ +G ++V +D LP+ +++ ++ + G ++ +A+ + L
Sbjct: 158 SVIGKGGKVVERIKKETGCKIRVLTDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQ 217
Query: 194 EC 195
+C
Sbjct: 218 DC 219
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 31/145 (21%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TD-----GA 58
D +++ + +T+R + SS ++ CLIG GG IV +RK +GA I I TD +
Sbjct: 394 DSGLNKGSTVTVRLVVPSS----QVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCAS 449
Query: 59 CPDRIVTVSGSVDNSSTSSVE-TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
D++V +SG + + TG L+V++ ++ T RSL +
Sbjct: 450 DNDQVVQISGEFSSVQDALYNATGRLRDNLFVSTQNSAGT------RSLSSLRV------ 497
Query: 118 NCSPQPLQLKLV-----IPAT--HC 135
+ SP +Q V +PAT HC
Sbjct: 498 DTSPYGIQQDFVPHGSQLPATTSHC 522
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 102/217 (47%), Gaps = 34/217 (15%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSG 68
+D+ + +T R L S N+ +IG GG ++RLR E A ++I D + PDR++ +
Sbjct: 3 VDDQSQVTFRLLVSS----NKAGGVIGKGGQNIKRLRSEYNATVNIPDSSGPDRVLQI-- 56
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
V NS + ++ + + D P L +
Sbjct: 57 -VANSRENGLDI-----------IKELIPLIREEVSPFSDGE--------ADPYTTTLSV 96
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
++ + G++IG+GG KIK++R + V+V + LP STER V ++G PD + AI +I
Sbjct: 97 LVQTSQVGAIIGRGGSKIKELRQSTETKVKVLQECLPYSTERRVQINGAPDAVLLAIGEI 156
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAY 225
+ C+ +KG+V+ Y+P + SGG +
Sbjct: 157 ---YVTCSEAPIKGSVLLYDPSQQDP-----SGGYGW 185
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQY 348
T++ + +D+ G VIG+ G R+ IR S A+I I E+ ++ I+G QE VS AQ+
Sbjct: 268 TQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITIRGTQEQVSHAQF 327
Query: 349 LINMCIE 355
L+ CI+
Sbjct: 328 LLQNCIQ 334
>gi|448085571|ref|XP_004195892.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359377314|emb|CCE85697.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 151/391 (38%), Gaps = 88/391 (22%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E S ++G G + +R ++ +I++++ P+RI++V G +N
Sbjct: 136 VKEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAEN------------ 183
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQLKLVIPATHCGS 137
V A+ + R++ +E +P LKL++P G
Sbjct: 184 ----------VAKAFGLIARTI---------LEEPEDEPASILSRQYNLKLLVPHPMVGF 224
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTL 197
+IGK G K ++I D S A ++ A LP ST+RI+++ G D I AIY I V+IE
Sbjct: 225 IIGKQGVKFREIEDSSAAKLKAAEQPLPYSTDRILSITGVGDAIHIAIYYISQVMIEHKD 284
Query: 198 QVVKGAVIPYEPKTMNAGP--------------VILSGGQAYTLHGEYAVPVQEVAGKKQ 243
+ K V+ Y P + + + A T+ V KQ
Sbjct: 285 CLKKNKVVYYNPANYHHNNMNMMNVSMMQPNTNMYMGTANALTMQALKDVSNPYAHQVKQ 344
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSR-------------------VKSGGKDTG 284
P+ + + S +P++ AL V+ GGK
Sbjct: 345 PYNFQMMFQPSVHPQHQFSASPSSPMALPAQTQYTDEHGNNVIGDVIVQPPVQVGGK--T 402
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG-AQINIHTGTE-----------SHKK 332
D F + V +I G VIGK G + +IR+ SG + I ++ +
Sbjct: 403 DKFYQDVFVANANI-GSVIGKGGHNIKQIRENSGCTYVKIEPDQRQSIMLGGGRGLTNIR 461
Query: 333 MFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
+ G +++ +A YLIN I K N
Sbjct: 462 KLTLTGSLQSIQIAIYLINSRIGTDKERNAN 492
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 111 INRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
++ +R + P + ++ P +++GK G KI IRD + + V S+ L ER
Sbjct: 115 VSNHREKESDPTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINV-SENLKNVPER 173
Query: 171 IVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE 230
I++V G + +++A I ++E EP+ A ILS + Y L +
Sbjct: 174 IISVRGPAENVAKAFGLIARTILE-------------EPEDEPAS--ILS--RQYNL--K 214
Query: 231 YAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGS 274
V PHP+ G ++G +G+ + ++ A L +
Sbjct: 215 LLV----------PHPMVGF-IIGKQGVKFREIEDSSAAKLKAA 247
>gi|448081636|ref|XP_004194937.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359376359|emb|CCE86941.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 140/354 (39%), Gaps = 79/354 (22%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVTVSGSVD 71
LI R L V+ E CLIG G ++ +R E+ K IS +RI+TVSG++D
Sbjct: 73 LINYRVL----VSAKESGCLIGQNGAVIDSIRAETNTKAGISKLQPGSHERILTVSGTLD 128
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP------LQ 125
NS+ + Y L V N YN+ ++ SP P
Sbjct: 129 NSAKA---LSYFAQALCNARVANTLN-YNYFP------------LKQLSPVPCIDEETTI 172
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L+IP G+LIG G +I+ I+ + ++ + L S ER+V + G D + A+
Sbjct: 173 LRLLIPNAQMGTLIGSKGIRIQQIQSMYNISMIASKAFLQGSNERLVELQGTVDNLYDAL 232
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
I LIE +V Y PK +A L+G
Sbjct: 233 RVISRCLIEDFSSIV--GTNYYVPKGSSANNGNLNG------------------------ 266
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
P + G+ S++ L +D+ G +IGK
Sbjct: 267 PTRRDSSGSSRRYGNLSVSTTTL------------------------TFPNDVVGALIGK 302
Query: 306 AGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYLINMCIELQK 358
GSR+ +R+ISGA I I E+ ++F I G A+ A+ L+ ++ K
Sbjct: 303 NGSRIQGVRKISGATITISNEVENQSDRVFTITGPSHAIEKAKSLLYHNLQRAK 356
>gi|448086121|ref|XP_004196024.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
gi|359377446|emb|CCE85829.1| Piso0_005464 [Millerozyma farinosa CBS 7064]
Length = 362
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 141/354 (39%), Gaps = 79/354 (22%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVTVSGSVD 71
LI R L V+ E CLIG G ++ +R E+ K IS +RI+TVSG++D
Sbjct: 73 LINYRVL----VSAKESGCLIGQNGAVIDSIRAETNTKAGISKLQPGSHERILTVSGTLD 128
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP------LQ 125
NS+ + Y L V N YN+ ++ SP P
Sbjct: 129 NSAKA---LSYFAQALCNARVANTLN-YNYFP------------LKQLSPVPCIDEETTI 172
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L+IP G+LIG G +I+ I+ + ++ + L S ER+V + G D + A+
Sbjct: 173 LRLLIPNAQMGTLIGSKGIRIQQIQSMYNISMIASKAFLQGSNERLVELQGTVDNLYDAL 232
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
I LIE +V Y PK +A L+ G +
Sbjct: 233 RVISRCLIEDFSSIV--GTHYYVPKGSSANNGNLN-------------------GLTRRD 271
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
G + + +T+LT +D+ G +IGK
Sbjct: 272 SSGSSRRYGNQNVSTTTLT-----------------------------FPNDVVGALIGK 302
Query: 306 AGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYLINMCIELQK 358
GSR+ +R+ISGA I I E+ ++F I G A+ A+ L+ ++ K
Sbjct: 303 NGSRIQGVRKISGATITISNEVENQSDRVFTITGPSHAIEKAKSLLYHNLQRAK 356
>gi|346322193|gb|EGX91792.1| KH domain RNA binding protein [Cordyceps militaris CM01]
Length = 464
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S E + +IG GG V +RK S AK +++D GA +RI+TV
Sbjct: 102 DETSWIHIRAVISSP----EAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAV-ERILTV 156
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + + + PL
Sbjct: 157 SGIVDAA----------------------AKAFGLIIRTLNNEPLTETSTASSKTYPL-- 192
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LPMS+ER + V G D + A Y
Sbjct: 193 RLLIPHILIGSIIGKGGARIREIQEASGARLNASDSCLPMSSERSLVVMGVADAVHIATY 252
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 253 YVGSTLLE 260
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQ+SG+ I I+ + S++++ + G +E +A YL
Sbjct: 393 QIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKINEPQDNSNERLVTVTGTEECNRMALYL 452
Query: 350 INMCIELQKN 359
+ ++ +K+
Sbjct: 453 LYARLDSEKH 462
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ ++ IP G++IGKGG KI +IR LSG+ +++ ++ S ER+VTV G +
Sbjct: 389 PMTQQIYIPNDMVGAIIGKGGQKINEIRQLSGSVIKI-NEPQDNSNERLVTVTGTEECNR 447
Query: 183 QAIYQICLVL 192
A+Y + L
Sbjct: 448 MALYLLYARL 457
>gi|448081084|ref|XP_004194801.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359376223|emb|CCE86805.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 151/391 (38%), Gaps = 88/391 (22%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E S ++G G + +R ++ +I++++ P+RI++V G +N
Sbjct: 136 VKEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAEN------------ 183
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQLKLVIPATHCGS 137
V A+ + R++ +E +P LKL++P G
Sbjct: 184 ----------VAKAFGLIARTI---------LEEPEDEPASILSRQYNLKLLVPHPMVGF 224
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTL 197
+IGK G K ++I D S A ++ A LP ST+RI+++ G D I AIY I V+IE
Sbjct: 225 IIGKQGVKFREIEDSSAAKLKAAEQPLPYSTDRILSITGVGDAIHIAIYYISQVMIEHKD 284
Query: 198 QVVKGAVIPYEPKTMNAGP--------------VILSGGQAYTLHGEYAVPVQEVAGKKQ 243
+ K V+ Y P + + + A T+ V KQ
Sbjct: 285 CLKKNKVVYYNPANYHHNNMNMMNVSMMQPNTNMYMGTANALTMQALKDVSNPYAHQVKQ 344
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSR-------------------VKSGGKDTG 284
P+ + + S +P++ A+ V+ GGK
Sbjct: 345 PYNFQMMFQPSVHPQHQFSASPSSPMAMPAQTQYTDEHGNNVIGDVIVQPPVQVGGK--T 402
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG-AQINIHTGTE-----------SHKK 332
D F + V +I G VIGK G + +IR+ SG + I ++ +
Sbjct: 403 DKFYQDVFVANANI-GSVIGKGGHNIKQIRENSGCTYVKIEPDQRQSIMLGGGRGLTNIR 461
Query: 333 MFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
+ G +++ +A YLIN I K N
Sbjct: 462 KLTLTGSLQSIQIAIYLINQRIGTDKERNAN 492
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 31/164 (18%)
Query: 111 INRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
++ +R + P + ++ P +++GK G KI IRD + + V S+ L ER
Sbjct: 115 VSNHREKESDPTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINV-SENLKNVPER 173
Query: 171 IVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGE 230
I++V G + +++A I ++E EP+ A ILS + Y L +
Sbjct: 174 IISVRGPAENVAKAFGLIARTILE-------------EPEDEPAS--ILS--RQYNL--K 214
Query: 231 YAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGS 274
V PHP+ G ++G +G+ + ++ A L +
Sbjct: 215 LLV----------PHPMVGF-IIGKQGVKFREIEDSSAAKLKAA 247
>gi|402592326|gb|EJW86255.1| hypothetical protein WUBG_02833 [Wuchereria bancrofti]
Length = 313
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 46/205 (22%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVT 65
DGK + L+T R +IG G V+ ++ E A +S+ D P+R+V
Sbjct: 37 DGKYELRLLVTSRGA----------GAIIGKKGESVKNIQTECDATVSVPDSQTPERVVQ 86
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
+ V +V+NV + +++ H N++R +
Sbjct: 87 L----------------------VAAVENVVKCVEMIIARIDEVHDNQDRDS-------E 117
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
LK+++ +H G++IG+GG +IK++R+ +G +++V S+ P STERI+ ++G P+ I
Sbjct: 118 LKVLVHQSHAGAVIGRGGSRIKELREENGVDLKVYSECCPQSTERIIQINGKPEKIV--- 174
Query: 186 YQICLVLIECTLQV--VKGAVIPYE 208
CLV I TL+ +KG PYE
Sbjct: 175 --ACLVTIINTLKEIPIKGPSRPYE 197
>gi|361132042|gb|EHL03657.1| putative Poly(rC)-binding protein 2 [Glarea lozoyensis 74030]
Length = 481
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 95/188 (50%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE + I +R + S+ E + +IG GG V +RK SGAK ++++ GA +RI+TV
Sbjct: 114 DESSWIHIRAVITSA----EAATVIGKGGENVSLIRKMSGAKCTVSEYQKGAV-ERILTV 168
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD + A+ + R+L + +++ PL
Sbjct: 169 SGVVDAA----------------------AKAFGLIIRTLNNEELDKASSAESRTYPL-- 204
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +I++I++ SGA + + LP+STER + V G D + A Y
Sbjct: 205 RLLIPHILIGSIIGKGGMRIREIQEASGARLNASDACLPLSTERSLVVLGVADAVHIATY 264
Query: 187 QICLVLIE 194
+ L E
Sbjct: 265 YVGSTLFE 272
>gi|336265613|ref|XP_003347577.1| hypothetical protein SMAC_04885 [Sordaria macrospora k-hell]
gi|380096444|emb|CCC06492.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 469
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 93/188 (49%), Gaps = 32/188 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
DE I +R + S E + +IG GG V ++R+ S AK +++D GA +RI+TV
Sbjct: 120 DETAWIHVRSVISSP----EAATIIGKGGENVSKIREMSNAKCTVSDYQKGAV-ERILTV 174
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
SG VD V A+ + R+L + + N + L
Sbjct: 175 SGVVDA----------------------VAKAFGLIIRTLNNEPLAE--PSNTHSKTYPL 210
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L+IP GS+IGKGG +IK+I++ SGA + + LP+STER + V G D + A Y
Sbjct: 211 RLLIPHVLIGSIIGKGGARIKEIQEASGARLNASDSCLPLSTERSLVVMGVADAVHIATY 270
Query: 187 QICLVLIE 194
+ L+E
Sbjct: 271 YVGSTLLE 278
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
+I + +D+ G +IGK G ++ EIRQISG+ I I+ + S++++ I G +E +A YL
Sbjct: 390 QIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDNSNERLVTITGTEECNRMALYL 449
Query: 350 INMCI-ELQKN 359
+ + ELQ N
Sbjct: 450 LYQRLGELQNN 460
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L ++ IP G++IGKGG KI +IR +SG+ +++ ++ S ER+VT+ G +
Sbjct: 387 LTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKI-NEPQDNSNERLVTITGTEECNRM 445
Query: 184 AIYQICLVLIE 194
A+Y + L E
Sbjct: 446 ALYLLYQRLGE 456
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 106/232 (45%), Gaps = 37/232 (15%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D+ T I +R V E S ++G G + LR+++ +I++++ P+RIV V
Sbjct: 155 DDPTFIQLRMY----CPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVK 210
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRS-LEDYHINRNRMENCSPQPLQL 126
G +N V A+ + R LE+ + + + Q L
Sbjct: 211 GPAEN----------------------VARAFGLITRVILEEP---EDEPASITSQQYNL 245
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
KL+IP G +IGK G K ++I + S A ++ A + LP ST+R+++V G D I A+Y
Sbjct: 246 KLLIPHPMIGFIIGKQGLKFREIEENSAAKLKAAENPLPYSTDRVLSVMGVGDAIHIAVY 305
Query: 187 QICLVLIECTLQVVKGAVIPYEPKTMNAGPVI---LSGGQAYTLHGEYAVPV 235
I V++E + K V+ Y P N P L G Q + + Y P+
Sbjct: 306 YIAQVMLEHKEVLKKNKVVLYNP--ANYQPTDHQNLGGRQRHPPNNSYNNPM 355
Score = 38.1 bits (87), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 114 NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA-SDMLPMSTERIV 172
N + P +QL++ P +++G+ G I +R+ ANV++ S+ L ERIV
Sbjct: 150 NHRDRDDPTFIQLRMYCPVKEASTIVGRKGETINHLRE--KANVRITVSENLKGVPERIV 207
Query: 173 TVHGNPDTISQAIYQICLVLIE 194
V G + +++A I V++E
Sbjct: 208 AVKGPAENVARAFGLITRVILE 229
>gi|320580877|gb|EFW95099.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 689
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 144/371 (38%), Gaps = 100/371 (26%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+LIT R L V+ E +IG G + R+R+++ K ++ C DRI+TV+G V
Sbjct: 384 SLITYRML----VSRREAGAIIGKNGDNITRIREQTNVKAGVSKVIEGCIDRILTVTGIV 439
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTA------------YNFMCRSLEDYHINRNRMEN 118
DN + V+ + ++V V +A YNF ++
Sbjct: 440 DNVPRALVQFA---KAVTDSNVQTVASASANGTDPTSLITYNFFP------------LKP 484
Query: 119 CSPQP----------LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST 168
P P L L+L+IP + G+LIGKGG +IK I++ + + D L ST
Sbjct: 485 LCPTPAASDPFYAETLSLRLLIPHSQMGTLIGKGGSRIKSIQETYNIKMVASKDYLRNST 544
Query: 169 ERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLH 228
ERIV V G + +A+ I L+ VV A I Y P
Sbjct: 545 ERIVEVQGAKTNLVEALNTISRCLLSDYHGVV--ATIYYTP------------------- 583
Query: 229 GEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
+QP G + +G GS D +
Sbjct: 584 -----------SPRQPPYKGGSKLDPQQGTGS------------------------DKEI 608
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT-GTESHKKMFHIQGCQEAVSLAQ 347
+ + G +IGK GSR+ EIR+ SG INI E ++ F + G +V A
Sbjct: 609 SEKTSFPGEFVGALIGKKGSRIQEIRRTSGCTINIDAEDNEQGQREFTLTGTTLSVDRAL 668
Query: 348 YLINMCIELQK 358
+ C E +K
Sbjct: 669 SSLYSCFEKEK 679
>gi|346473549|gb|AEO36619.1| hypothetical protein [Amblyomma maculatum]
Length = 320
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 36/201 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+ +R L S +IG GG + LRKE A IS+ D P+RI+++
Sbjct: 39 VDVRFLLQS----RNAGAIIGKGGTNINSLRKEFKASISVPDCPGPERILSI-------- 86
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQPLQLKLVIPA 132
V +D + + L+D+ H +N +++L++
Sbjct: 87 --------------VADLDTLGDILLNIIPKLDDFAQHTGQNGGSES-----EMRLLMHQ 127
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H G +IG+ GC+IK++R+ +GAN++V P STERIV V G+P + I QIC ++
Sbjct: 128 SHAGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGSPAVVVDCIKQICDII 187
Query: 193 IECTLQVVKGAVIPYEPKTMN 213
+ +KG PY+P +
Sbjct: 188 ---GVAPIKGLNKPYDPHNFD 205
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
E +++ AGC+IG+AG R+ E+R+ +GA I +H
Sbjct: 120 EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVH 155
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 153/340 (45%), Gaps = 72/340 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG V + +SGA+I ++ DRI+ V+GS++
Sbjct: 59 SVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSINE-------------- 104
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ TA N + + L + N ++ + Q ++LV+P + CG +IGKGG I
Sbjct: 105 --------ILTAANLILQKLLSEAEDNNDVDEKTSQ---VRLVLPNSVCGGIIGKGGATI 153
Query: 147 KDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K + S A+++++S +LP ++R+VT+ G T+ Q + I L+ V K A
Sbjct: 154 KSFVEHSQASIKLSSQDQILPGVSDRLVTITG---TLEQQLRAIFLI-------VSKLAE 203
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP----HPLAGLAVLGIEGIGS 260
P + NA P+ +GG + G + G P P G +V G+ +
Sbjct: 204 DPNYAQYANA-PLSYTGGSVAGIQG--------IPGGYTPVGYGLPNYGSSVYGVNARNN 254
Query: 261 TSLTPAALAALSG------SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIR 314
L A L A+ V SG ++ + DD G ++G+AG +L+I+
Sbjct: 255 KGLM-APLVAMRSPLPIGVPLVASGA------LTSVKMAVPDDRVGVIVGRAGRTILDIQ 307
Query: 315 QISGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLI 350
Q+SGA+I I + ++ + I G +AV A++++
Sbjct: 308 QVSGAKIKISDRGDFISGTNDRQVTISGPIDAVQHARHML 347
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 93/177 (52%), Gaps = 29/177 (16%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG GG ++RLR + AK+SI D P+RI+ + +V
Sbjct: 49 VIGKGGENIKRLRVDYDAKVSIPDCNGPERIIKIG---------------------TRNV 87
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
DN + S+ + ++++ N +++++ +H G++IG+ G KIK++R+
Sbjct: 88 DNAIDCIKDIIPSVGEKKHSQDQQNNSF-----IRIMVHQSHAGAIIGRAGFKIKELREK 142
Query: 153 SGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
+GA+ +V ++ P ST+R+V + G+PD I++A ++ + CT VKG V Y+P
Sbjct: 143 TGAHFKVYTETCPKSTDRVVQLTGSPDVIAKAAREVYEI---CTETAVKGPVQDYDP 196
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYL 349
++ + +D+AG +IG+ G R+ IR SGAQI I K ++ I G Q ++ A++L
Sbjct: 372 QVTIPNDLAGSIIGRGGQRIKRIRMQSGAQIKIDDPLSGAKDRIITITGTQHDIAHAKFL 431
Query: 350 INMCIELQKN 359
+ ++ +N
Sbjct: 432 LQNSVKEYQN 441
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IG+GG +IK IR SGA +++ D L + +RI+T+ G I+ A +
Sbjct: 372 QVTIPNDLAGSIIGRGGQRIKRIRMQSGAQIKI-DDPLSGAKDRIITITGTQHDIAHAKF 430
>gi|344300282|gb|EGW30622.1| hypothetical protein SPAPADRAFT_63451 [Spathaspora passalidarum
NRRL Y-27907]
Length = 374
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 151/358 (42%), Gaps = 68/358 (18%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRI 63
+ K + D +I +R L V+ E CLIG G ++ +R E+ K IS +RI
Sbjct: 72 NDKSNGDAVINVRVL----VSAKEAGCLIGQNGKVIDGIRDETNTKAGISRLQPGSHERI 127
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+TVSG +DN + + Y L D+ YN+ L+ N +EN +
Sbjct: 128 LTVSGKLDNCAKA---LSYFAQALC----DSTIETYNYF--PLKQLSANPC-IEN---ET 174
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L+L++P G+LIG G +I+ I+ ++ + LP S ER+V + G + +
Sbjct: 175 TILRLLVPNAQMGTLIGSKGLRIQQIQSNYHISMIASKSFLPGSNERLVELQGTVNDLYD 234
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ 243
A+ I LIE + G Y P+ H +Y
Sbjct: 235 ALRIIARCLIEDISAL--GNTNYYVPRGH---------------HSQYN----------- 266
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
V G+ ST+ T A S + + T + +DI G +I
Sbjct: 267 -------GVNTTNGVSSTTPTNGRNFARKSSHIAT-----------TSLSFPNDIVGALI 308
Query: 304 GKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI--NMCIELQK 358
GK GSR+ +R++SGA I I E ++++F I G AV A+ L+ N+ E Q+
Sbjct: 309 GKNGSRIQGVRKVSGATIGISEEVEGKNERIFTISGSPHAVEKAKGLLYHNLQREEQR 366
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 157/362 (43%), Gaps = 62/362 (17%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTV-S 67
EDT+ C +I +IG GG I ++LR E+ +KI I++ C +R+VT+ S
Sbjct: 41 EDTVFRYLC------PTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYS 94
Query: 68 GSVD-NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
GS + N S + + P D V M LED+ Q + +
Sbjct: 95 GSEETNVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDH------------QQITV 142
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTIS 182
++++P+ G +IGKGG I+++R +GA ++V +S+ LP ++++ ++ + G +
Sbjct: 143 RMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVK 202
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
+A+YQ+ L + + + + P I G AG
Sbjct: 203 KALYQVAARLHDNPSR---------SQHQLLSSPSIFRSG----------------AGFV 237
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
PH AG V+G+ TSL + S R KS + +F + T+++ G V
Sbjct: 238 NPH--AGTQVMGV-----TSLMGPYASYKSDGRSKS---SSVKEFAVRLVCPTENV-GAV 286
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTT 362
IGK G + ++RQ SGA I + + +EA I+ + LQ ++
Sbjct: 287 IGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSE 346
Query: 363 NT 364
T
Sbjct: 347 KT 348
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG I+++LR+ESGA I + A D I+ VS + + E P
Sbjct: 283 VGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVS------AKEAFEDQSP---- 332
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+ RS E + L +L++P++ G LIGKGG I
Sbjct: 333 ------TIDATMRLQPRSSEKTE------KESGDAILTTRLLVPSSRVGCLIGKGGSIIN 380
Query: 148 DIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
++R+ + A+++V S + LP + +V + G+ + + A+ Q+ + L T + ++G+
Sbjct: 381 EMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLMRLRANTFE-MEGS 439
Query: 204 VIPYEP 209
+ P
Sbjct: 440 FPAFSP 445
>gi|294655167|ref|XP_457273.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
gi|199429743|emb|CAG85274.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
Length = 486
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 157/411 (38%), Gaps = 100/411 (24%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
+F V E S ++G G + +R ++ +I++++ P+RIV+V G +N
Sbjct: 110 VMFRMYCPVKEASTVVGKKGEKINHIRDKANVRINVSENLKNVPERIVSVRGPAEN---- 165
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQLKLV 129
V A+ + R++ +E +P LKL+
Sbjct: 166 ------------------VARAFGLITRTI---------LEEPEDEPASMLSRQYNLKLL 198
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP G +IGK G K ++I + S A ++ A LP ST+RI+++ G D I AIY I
Sbjct: 199 IPHPMVGYIIGKQGVKFREIEENSAAKLKAAEQPLPYSTDRILSITGVGDAIHIAIYYIS 258
Query: 190 LVLIECTLQVVKGAVIPYEPKTM---------------------NAGPVILSGGQAYTLH 228
V+IE + K V+ Y P N+ + + G +
Sbjct: 259 QVVIEHKDCLKKNKVVFYNPANYHHTNVNNNMNNNMVNMSMMPSNSNMMAMGGANPLAMQ 318
Query: 229 G-----EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS----------- 272
G + A P + KQP+ + I TPA ++++
Sbjct: 319 GMASMKDNANPYTQQP--KQPYNFQMMFQPSIHPQHQYVATPAPTSSMTLPPQNQYTDEH 376
Query: 273 -----GSRVKSGGKDTG---DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG-AQINI 323
G + S G D F E V +I G VIGK G+ + +IR+ SG + I
Sbjct: 377 GNNMIGDVITSPPVQVGSTTDKFNEDVFVANANI-GSVIGKGGNNIKQIRENSGCTYVKI 435
Query: 324 HTGTE-----------SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
++ + + G +++ +A YLIN I K N
Sbjct: 436 EPDQRQSLMLGGGKGLTNIRKLTLTGSLQSIQMAIYLINQRIGADKERNAN 486
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 111 INRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
++ +R + P + ++ P +++GK G KI IRD + + V S+ L ER
Sbjct: 97 VSNHREKERDPTYVMFRMYCPVKEASTVVGKKGEKINHIRDKANVRINV-SENLKNVPER 155
Query: 171 IVTVHGNPDTISQAIYQIC-LVLIECTLQVVKGAVIPYEPKTMNAGPVI--LSGGQAYTL 227
IV+V G + +++A I +L E + Y K + P++ + G Q
Sbjct: 156 IVSVRGPAENVARAFGLITRTILEEPEDEPASMLSRQYNLKLLIPHPMVGYIIGKQGVKF 215
Query: 228 HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIG 259
++ +QP P + +L I G+G
Sbjct: 216 REIEENSAAKLKAAEQPLPYSTDRILSITGVG 247
>gi|71019141|ref|XP_759801.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
gi|46099599|gb|EAK84832.1| hypothetical protein UM03654.1 [Ustilago maydis 521]
Length = 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 35/194 (18%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVT 65
ID + + +R L V+ E +IG GG V LR+++G K ++ P DR+++
Sbjct: 46 IDPNATLQLRAL----VSTKEAGIIIGKGGANVAELREQTGVKAGVSK-VVPGVHDRVLS 100
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP---- 121
V+G++ + A+ + +++ + +N + SP
Sbjct: 101 VTGTLVG----------------------ISDAFALIAKTILENPLNAPVQADGSPAEAA 138
Query: 122 -QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
Q ++L+I G++IG+ G KIK I+DLSGA + + +MLP STER+V V G+ D
Sbjct: 139 AQTTSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASKEMLPQSTERVVEVQGSVDA 198
Query: 181 ISQAIYQICLVLIE 194
I AI++I L E
Sbjct: 199 IRVAIHEIAKCLAE 212
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IGK GS++ EIR++SG++I+I E+ ++MF IQG EA A YL
Sbjct: 337 ISIPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEANEKALYL 396
Query: 350 INMCIELQK 358
+ +E++K
Sbjct: 397 LYNQLEIEK 405
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
IP+ G +IGKGG KI +IR LSG+ + +A + ER+ T+ G P+ +A+Y
Sbjct: 339 IPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEANEKALY 395
>gi|388855866|emb|CCF50441.1| related to poly(rC)-binding protein 3 [Ustilago hordei]
Length = 440
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 97/195 (49%), Gaps = 35/195 (17%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIV 64
++D D + +R L V+ E +IG GG V LR+++G K ++ P DR++
Sbjct: 36 ELDPDATLLVRAL----VSTKEAGIIIGKGGANVAELREQTGVKAGVSK-VVPGVHDRVL 90
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP--- 121
+V+G++ + A+ + +++ + +N + +P
Sbjct: 91 SVTGTLVG----------------------ISDAFALIAKTILENPLNAPVQADGTPAQA 128
Query: 122 --QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
Q ++L+I G++IG+ G KIK I+DLSGA + + +MLP STER+V V G+ D
Sbjct: 129 AAQTSSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASKEMLPQSTERVVEVQGSVD 188
Query: 180 TISQAIYQICLVLIE 194
I A++QI L E
Sbjct: 189 AIRVAVHQIARCLAE 203
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IGK GS++ EIR++SG++I+I E+ ++MF IQG EA A +L
Sbjct: 348 ISIPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEANEKALFL 407
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
+ +E +K + P D D +A TA
Sbjct: 408 LYNQLETEKERRQKQTSTVNP-DEDTQAAAASTA 440
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
IP+ G +IGKGG KI +IR LSG+ + +A + ER+ T+ G P+ +A++
Sbjct: 350 IPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEANEKALF 406
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 159/357 (44%), Gaps = 91/357 (25%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DR+ +SGS+ +
Sbjct: 28 SVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLAD-------------- 73
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
V TA+ + + I + ++ + +Q+KL++P T CG++IGKGG I
Sbjct: 74 --------VLTAFQLIISKI----IKDDNQDDT--KSIQVKLLVPKTVCGAIIGKGGSNI 119
Query: 147 KDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K + S A+++++S +LP +RIVT+ GN D I +A+ I L E +
Sbjct: 120 KKFVEDSQASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEES-------- 171
Query: 205 IPYEPKTMNAGPVILSGGQ--AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTS 262
Y T + P++ G + ++ + Y H GL L G G
Sbjct: 172 -SYTETT--STPLVYPGTRPTSFIVRCVY-------------HASPGLQNLRRNGPGP-P 214
Query: 263 LTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
+ A + AL+ S I + D+ G ++G+AG L E++Q SGA+I
Sbjct: 215 MPVAYVGALTSS---------------VTIGIPDEHIGFILGRAGKTLQELQQSSGAKIK 259
Query: 323 IH------TGTESHKKMFHIQGCQEAVSLAQYLINMCIE------LQKNNTTNTSDN 367
+ TGTE ++K+ I G EA+ AQ+L+ ++ +++NT ++N
Sbjct: 260 VSDRGDFVTGTE-YRKVTMI-GSGEAIQAAQFLLTQKVQQSLASDYERDNTKQPNNN 314
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGN 177
L+ ++ T GS+IGKGG I D + SGA +Q++ + P +++R+ + G+
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
>gi|313224203|emb|CBY43618.1| unnamed protein product [Oikopleura dioica]
Length = 331
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 152/351 (43%), Gaps = 68/351 (19%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D +T+R L +N + S +IG ++ LR+++ I+++ R++T++
Sbjct: 5 DIDLTLRFL----MNQKQASQIIGRNASNIKNLREQTECNITLSSREHEKRLLTIAAK-- 58
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ S++T V+ + + A N +Y ++ P+ L LVIP
Sbjct: 59 --KSISMKT--------VSRLGEILEAEN------NEYG------KSTKLVPITLTLVIP 96
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
CG +IGKGG +KD+R SGA + +++D LP S ER + GN +++QAI + +
Sbjct: 97 KNICGMIIGKGGEALKDLRVKSGAQINMSADCLPKSDERTCQITGNNISVTQAIDLLIGI 156
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
+I+ + KG G + + +E AG+ +
Sbjct: 157 MIKAAIDESKGE---------------FKGTPSAEIRAYDPKNAEEPAGRSEK------- 194
Query: 252 VLGIEGIGSTSLTPAALAALSGSR-----VKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
L A A ++ ++ ++ + D E+ + + G +IGK
Sbjct: 195 --------DDKLMQMATAFMTANQMINPTLEYSPIEINDQL--QELRVPNQHMGAIIGKG 244
Query: 307 GSRLLEIRQISGAQINIHTGTESHK---KMFHIQGCQEAVSLAQYLINMCI 354
G R+ EIR +SG I++ K + ++G ++ +++A YL+N I
Sbjct: 245 GKRIGEIRMMSGCNIHVERSDADSKYGMRRLTLKGTKQQITMAAYLVNQTI 295
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+ +R L S +IG GG + LRKE A IS+ D P+RI+++ +D
Sbjct: 38 VDVRFLLQS----RNAGAIIGKGGSNINSLRKEFKASISVPDCPGPERILSIVADLDTLG 93
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
+ + +D+ + H +N +++L++ +H
Sbjct: 94 EILLNI--------IPKLDDRSMQFA--------QHTGQNGGSES-----EMRLLMHQSH 132
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G +IG+ GC+IK++R+ +GAN++V P STERIV V G+P + I QIC ++
Sbjct: 133 AGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGSPSVVVDCIKQICDIV-- 190
Query: 195 CTLQVVKGAVIPYEPKTMN 213
+ +KG PY+P +
Sbjct: 191 -GVAPIKGLNKPYDPHNFD 208
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
E +++ AGC+IG+AG R+ E+R+ +GA I +H
Sbjct: 123 EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVH 158
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 41/208 (19%)
Query: 3 GNGDG-KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
G GDG K+D +R L S +IG GG + RLR + A +++ D + P+
Sbjct: 41 GGGDGPKVD------LRILLQSK----NAGAIIGKGGNNIHRLRTQYNATVTVPDCSGPE 90
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
RI+TV T++ ET L V V LE+Y ++ +C
Sbjct: 91 RILTV--------TTNQETAL-SCLLDVIPV-------------LEEYQQYKDLDFDC-- 126
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
++++++ + G++IG+ G KIK++R+ +GAN++V S++ P STER+V ++G+P+ +
Sbjct: 127 ---EMRMLVHQSQAGAIIGRAGFKIKELREQTGANIKVYSEVCPNSTERVVQMNGSPEVV 183
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I VL + +KG V Y+P
Sbjct: 184 INCMRMILDVLNQTP---IKGPVQLYDP 208
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +I IR+ SGA +++ + LP S +RI+T+ G P+ I A Y
Sbjct: 358 QVTIPKDLAGSIIGKGGSRIGQIREDSGALIKI-DEPLPGSNDRIITIKGTPEQIQNAQY 416
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSL 345
F T++ + D+AG +IGK GSR+ +IR+ SGA I I S+ ++ I+G E +
Sbjct: 354 FTTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSNDRIITIKGTPEQIQN 413
Query: 346 AQYLI 350
AQYL+
Sbjct: 414 AQYLL 418
>gi|343424730|emb|CBQ68268.1| related to poly(rC)-binding protein 3 [Sporisorium reilianum SRZ2]
Length = 436
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 109/220 (49%), Gaps = 38/220 (17%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVT 65
ID + + +R L V+ E +IG GG V LR+++G K ++ P DR+++
Sbjct: 41 IDPNATLLVRAL----VSTKEAGIIIGKGGANVADLREQTGVKAGVSK-VVPGVHDRVLS 95
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP---- 121
V+G++ + A+ + +++ + +N + SP
Sbjct: 96 VTGTLVG----------------------IADAFALIAKTILENPLNTPVQADGSPAESA 133
Query: 122 -QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
Q ++L+I G++IG+ G KIK I+DLSGA + + +MLP STER+V V G+ D+
Sbjct: 134 AQSTSVRLLISHNLMGTVIGRQGLKIKHIQDLSGARMVASKEMLPQSTERVVEVQGSVDS 193
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS 220
I AI++I L E + V+ Y+P + GP IL+
Sbjct: 194 IRVAIHEIVKCLAEDWDRSQN--VVLYQPGQGD-GPGILA 230
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IGK GS++ EIR++SG++I+I E+ ++MF IQG EA A +L
Sbjct: 333 ISIPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEANEKALFL 392
Query: 350 INMCIELQK 358
+ +E +K
Sbjct: 393 LYNQLETEK 401
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
IP+ G +IGKGG KI +IR LSG+ + +A + ER+ T+ G P+ +A++
Sbjct: 335 IPSDMVGCIIGKGGSKITEIRRLSGSRISIAKVPHDETGERMFTIQGTPEANEKALF 391
>gi|156372967|ref|XP_001629306.1| predicted protein [Nematostella vectensis]
gi|156216303|gb|EDO37243.1| predicted protein [Nematostella vectensis]
Length = 419
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 97/201 (48%), Gaps = 40/201 (19%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSG 68
+D + T+R L S + +IG GG +RRLR E A +++ D +R++T++
Sbjct: 47 VDSNAPTTLRILIQSK----DAGGIIGKGGTNIRRLRTEYNAVVNVPDTNSNERVLTITA 102
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
++ E V + V + ++++
Sbjct: 103 PRQSALDILAEV--------VPKIGEVQYGH-------------------------EIQM 129
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
++ + GS+IG+ G KIK+IR+ SGANV+V +D LP STER+VT+ G+ +TI + + +
Sbjct: 130 LVQRSQVGSIIGRAGYKIKEIREGSGANVKVFADCLPNSTERVVTMSGSAETIVKCVENV 189
Query: 189 CLVLIECTLQVVKGAVIPYEP 209
+ + L KG VI ++P
Sbjct: 190 LVAIANAPL---KGQVILFDP 207
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR+ A +++ D LP S +RI+T+ GN + I+ A Y
Sbjct: 347 QVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKI-DDPLPGSNDRIITITGNQEQINHAQY 405
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 278 SGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHI 336
SGG G D T++ + D+AG +IGK G R+ IR A I I S+ ++ I
Sbjct: 334 SGGNTAGGDQTSTQVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKIDDPLPGSNDRIITI 393
Query: 337 QGCQEAVSLAQYLINMCIE 355
G QE ++ AQYL+ +
Sbjct: 394 TGNQEQINHAQYLLQQSVR 412
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 40/202 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+ +R L S +IG GG ++RLR + A +++ D + P+R++TV
Sbjct: 26 VELRILLQSK----NAGAIIGKGGANIKRLRSDYNATVTVPDSSGPERVLTVGA------ 75
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCR---SLEDYHINRNRMENCSPQPLQLKLVIP 131
N+ TA + SLEDY ++ C +++ +I
Sbjct: 76 -------------------NLGTALEILLDVIPSLEDYKRFKDLEFEC-----EMRWLIH 111
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG+GG KIK++RD +GA ++V S P S+ERIV + G P + ++ I +
Sbjct: 112 QSQAGCVIGRGGNKIKELRDETGAQIKVYSQCAPQSSERIVQLTGKPRVVVNSLATIFDL 171
Query: 192 LIECTLQVVKGAVIPYEPKTMN 213
L KG PY+P +
Sbjct: 172 LQTAP---PKGFNNPYDPNNFD 190
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
T++ + D+AG +IGK GSR+ +IRQ SGA INI + S ++ I G Q+ + AQY
Sbjct: 326 TQVSIPKDLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQIQNAQY 385
Query: 349 LINMCIE 355
L+ M ++
Sbjct: 386 LLQMSVK 392
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ IR SGA + + M S +RI+T+ G+ D I A Y
Sbjct: 327 QVSIPKDLAGAIIGKGGSRIRQIRQESGAGINIDEPM-QGSQDRIITITGSQDQIQNAQY 385
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVD 71
+IG GG +R++R+ESGA I+I + DRI+T++GS D
Sbjct: 337 AIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQD 378
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 102 MCRSLE------DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGA 155
M RSLE D + + R E + ++L++++ + + G++IGKGG IK +R A
Sbjct: 1 MKRSLEEDNTIGDVPLKKTRGEGPN---VELRILLQSKNAGAIIGKGGANIKRLRSDYNA 57
Query: 156 NVQVASDMLPMSTERIVTVHGN 177
V V P ER++TV N
Sbjct: 58 TVTVPDSSGP---ERVLTVGAN 76
>gi|260814700|ref|XP_002602052.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
gi|229287357|gb|EEN58064.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
Length = 499
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 97/197 (49%), Gaps = 34/197 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+ +R L S +IG G ++RLR E A +++ D P+RI+T+S ++ +
Sbjct: 43 VDLRILLQSK----NAGAIIGKQGLNIKRLRSEYKATVTVPDCTGPERILTISADLNTA- 97
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQPLQLKLVIPA 132
C + LEDY H ++ N + +L++++
Sbjct: 98 ---------------------CACLLDIIPVLEDYQKHYQEHKDLNFN---CELRMLVHQ 133
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ G +IG+ G KIK++R+ + AN++V S+ +P STER+V + G P+ AI +I +L
Sbjct: 134 SQAGCIIGRAGFKIKELREQTEANIKVYSECMPGSTERVVALTGKPEKCVGAIKKIIELL 193
Query: 193 IECTLQVVKGAVIPYEP 209
+ +KG IPY+P
Sbjct: 194 QKAP---IKGQNIPYDP 207
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IG+GG +I+ IR+ S A +++ + LP ST+RI+T+ G+ D I A +
Sbjct: 411 QVTIPKELAGSIIGRGGSRIRTIRERSEAQIKI-DEPLPGSTDRIITISGDNDQIRNAQF 469
Query: 187 QICLVLIECTLQVVKGAVIPY 207
L+ C++ + + + Y
Sbjct: 470 ---LLQESCSVNLGRTFAVRY 487
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G TG + T++ + ++AG +IG+ GSR+ IR+ S AQI I S ++ I G
Sbjct: 400 GFGTGGNITSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQIKIDEPLPGSTDRIITISG 459
Query: 339 CQEAVSLAQYLIN 351
+ + AQ+L+
Sbjct: 460 DNDQIRNAQFLLQ 472
>gi|358342308|dbj|GAA49803.1| poly(rC)-binding protein 2/3/4 [Clonorchis sinensis]
Length = 528
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 62/93 (66%), Gaps = 5/93 (5%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
P+ L+L++P HCGSLIGKGG +IK +R +GA +QVAS+ LP S++R +T+ G+ ++
Sbjct: 39 PITLRLLVPTIHCGSLIGKGGKRIKFLRQSTGAAIQVASESLPNSSDRTITITGSARAVA 98
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAG 215
++ +CL TL+ + G P+ P +M++
Sbjct: 99 LCVHHVCLK----TLRFIYG-YYPFSPPSMSSA 126
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQ 347
+ E+ + +D+ GC+IG+ G+++ EIRQ S A I I +G E+ ++ I G AV AQ
Sbjct: 255 KAEMYIPNDLVGCIIGRGGNKINEIRQTSQANIKISSGEENLCERRITITGSFPAVQKAQ 314
Query: 348 YLINMCIELQKN----NTTNTSDNPEPAD 372
+IN +EL K+ NT S P+D
Sbjct: 315 TMINNSVELHKHLLALNTAMNSVYVNPSD 343
>gi|366993026|ref|XP_003676278.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
gi|342302144|emb|CCC69917.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 166/396 (41%), Gaps = 64/396 (16%)
Query: 6 DGKIDEDTL-ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDR 62
+ K ED + + M C +V E S ++GP G + +++K++ +I++++ P+R
Sbjct: 67 EEKFPEDNVHLRMLC------SVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPER 120
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
I+ V G+ DN V Y + + + F ++ S +
Sbjct: 121 IIYVRGACDN-----VANAYLNIAKAIRKNEGII----FQGPEEDEKDREEGSQSKSSDE 171
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
+ + L+I G +IGK G ++K+I S + + D L S +RI+T+ G PD I
Sbjct: 172 LVTIHLLISHHLIGYIIGKHGSRLKEIEQTSSCKLYASPDQLFSSNDRILTITGFPDAIQ 231
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA---------- 232
+A I +++C K I Y+P + G LS +Y + +
Sbjct: 232 KATRCIGQTILDCHESTSKKRAIFYQP---SIGYSALSNSSSYYGYNNQSQRFYQFNKYN 288
Query: 233 -----------------VPVQ--EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSG 273
PVQ +V + P+ + +TS TP + L
Sbjct: 289 SYRSRRAPRSPPVMMIPTPVQPIQVTNQTLKQPVYTAETVA----NATSFTPNFV--LPN 342
Query: 274 SRV------KSG-GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
R+ +SG +D+ V+ EI + ++ G +IG+ G + I++ +G I I
Sbjct: 343 VRIVNTIISQSGNNQDSQLMSVQREIYINEEFVGNIIGREGRNINSIKETTGCSIFIDDP 402
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNT 361
E S+++ I+G Q A LI+ IE+ + N+
Sbjct: 403 VEGSYERKLVIKGTQMGSQAAIMLISNKIEMDRMNS 438
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 145/358 (40%), Gaps = 69/358 (19%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 19 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 57
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 58 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 117
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 118 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED- 176
Query: 197 LQVVKGAVIPYEPKTMN------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
P +N AGPV S YA P + A
Sbjct: 177 ---------PQSSSCLNISYANVAGPVANSN----PTGSPYASPADVLPAAAAASAAAAS 223
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE------TEIVLTDDIAGCVIG 304
+LG G+ PA +G+ +GG T + EI + +++ G ++G
Sbjct: 224 GLLGPAGLAGVGAFPAXXXXXAGA---AGGFLTAEKLAAESAKELVEIAVPENLVGAILG 280
Query: 305 KAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
K G L+E ++++GA+I I E + + I G A AQYLI+ + ++
Sbjct: 281 KGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQ 338
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 66
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 158/355 (44%), Gaps = 87/355 (24%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DR+ +SGS+ +
Sbjct: 28 SVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGSLAD-------------- 73
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
V TA+ + + I + ++ + +Q+KL++P T CG++IGKGG I
Sbjct: 74 --------VLTAFQLIISKI----IKDDNQDDT--KSIQVKLLVPKTVCGAIIGKGGSNI 119
Query: 147 KDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K + S A+++++S +LP +RIVT+ GN D I +A+ I L E +
Sbjct: 120 KKFVEDSQASIKLSSQDQLLPGVIDRIVTIGGNVDQIIKAVTLILTKLTEES-------- 171
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
Y T + P++ G G V+ V H GL L G G +
Sbjct: 172 -SYTETT--STPLVYPG------TGPTPFIVRCVY-----HASPGLQNLRRNGPGP-PMP 216
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
A + AL+ S I + D+ G ++G+AG L E++Q SGA+I +
Sbjct: 217 VAYVGALTSS---------------VTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKVS 261
Query: 325 ------TGTESHKKMFHIQGCQEAVSLAQYLINMCIE------LQKNNTTNTSDN 367
TGTE ++K+ I G EA+ AQ+L+ ++ +++NT ++N
Sbjct: 262 DRGDFVTGTE-YRKVTMI-GSGEAIQAAQFLLTQKVQQSLASDYERDNTKQPNNN 314
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGN 177
L+ ++ T GS+IGKGG I D + SGA +Q++ + P +++R+ + G+
Sbjct: 17 LRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
>gi|150864547|ref|XP_001383407.2| PAB1 binding protein [Scheffersomyces stipitis CBS 6054]
gi|149385803|gb|ABN65378.2| PAB1 binding protein [Scheffersomyces stipitis CBS 6054]
Length = 500
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 26/185 (14%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E SC++G G + +R+++ +I++++ P+RI++V G +N
Sbjct: 113 VKEASCIVGKKGEKINHIREKASVRINVSENLKNVPERIISVRGPAEN------------ 160
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
V A+ + R++ D + + Q LK+++P G +IGK G
Sbjct: 161 ----------VARAFGLITRTILDE--PEDEPASMISQQYNLKILVPHPMIGFIIGKQGS 208
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K ++I + S A ++ A LP ST+RI+++ G D I AIY I V++E + K +
Sbjct: 209 KFREIEENSAAKLKAAEQPLPYSTDRILSITGVGDAIHIAIYYISQVMLEHKDCLKKNKI 268
Query: 205 IPYEP 209
I Y P
Sbjct: 269 IYYNP 273
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 4/152 (2%)
Query: 111 INRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTER 170
I+ +R + P + +++ P ++GK G KI IR+ + + V S+ L ER
Sbjct: 92 ISNHRERDSDPTYVSIRMYCPVKEASCIVGKKGEKINHIREKASVRINV-SENLKNVPER 150
Query: 171 IVTVHGNPDTISQAIYQIC-LVLIECTLQVVKGAVIPYEPKTMNAGPVI--LSGGQAYTL 227
I++V G + +++A I +L E + Y K + P+I + G Q
Sbjct: 151 IISVRGPAENVARAFGLITRTILDEPEDEPASMISQQYNLKILVPHPMIGFIIGKQGSKF 210
Query: 228 HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIG 259
++ +QP P + +L I G+G
Sbjct: 211 REIEENSAAKLKAAEQPLPYSTDRILSITGVG 242
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 157/362 (43%), Gaps = 62/362 (17%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTV-S 67
EDT+ C +I +IG GG I ++LR E+ +KI I++ C +R+VT+ S
Sbjct: 41 EDTVFRYLC------PTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYS 94
Query: 68 GSVD-NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
GS + N S + + P D V M LED+ Q + +
Sbjct: 95 GSEETNVSEDTGDLISPAQDALFRVHDRVLAEDLRMDEDLEDH------------QQITV 142
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTIS 182
++++P+ G +IGKGG I+++R +GA ++V +S+ LP ++++ ++ + G +
Sbjct: 143 RMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVK 202
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKK 242
+A+YQ+ L + + + + P I G AG
Sbjct: 203 KALYQVAARLHDNPSR---------SQHQLLSSPSIFRSG----------------AGLV 237
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
PH AG V+G+ TSL + S R +S + +F + T+++ G V
Sbjct: 238 NPH--AGTQVMGV-----TSLMGPYASYKSDGRSRS---SSVKEFAVRLVCPTENV-GAV 286
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTT 362
IGK G + ++RQ SGA I + + +EA I+ + LQ ++
Sbjct: 287 IGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSE 346
Query: 363 NT 364
T
Sbjct: 347 KT 348
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 29/186 (15%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG I+++LR+ESGA I + A D I+ VS + + E P
Sbjct: 283 VGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVS------AKEAFEDQSP---- 332
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+ RS E + L +L++P++ G LIGKGG I
Sbjct: 333 ------TIDATMRLQPRSSEKTE------KESGDAILTTRLLVPSSRVGCLIGKGGSIIN 380
Query: 148 DIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
++R+ + A+++V S + LP + +V + G+ + + A+ Q+ + L T + ++G+
Sbjct: 381 EMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAANALLQVLMRLRANTFE-MEGS 439
Query: 204 VIPYEP 209
+ P
Sbjct: 440 FPAFSP 445
>gi|325087770|gb|EGC41080.1| KH domain RNA-binding protein [Ajellomyces capsulatus H88]
Length = 321
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 138/331 (41%), Gaps = 74/331 (22%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ + +T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 34 KTDEEYAQSTLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDR 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G + + AY + + L + N
Sbjct: 90 VLTVTGPLQGT----------------------AKAYAIVAKGLLEGAPQLGMGGVASNN 127
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 128 GTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP---KTMNAGPVILS----------GGQAYT 226
I +A+++I LI+ Q G V+ Y P ++ GP S GG++Y
Sbjct: 186 GIEKAVWEIGKCLID-DWQRGTGTVL-YNPAVRASVGGGPPNNSLGSGASTGGYGGRSYN 243
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDD 286
G A + G + ++ T + ++ + G++
Sbjct: 244 RTGNGADFSDQTGGYNRRS--------------NSDATSRGIPLVT---------EDGEE 280
Query: 287 FVETEIVLTDDIAGCVIGKAGSRLLEIRQIS 317
I + D+ GC+IG+ GS++ EIR+ S
Sbjct: 281 VQTQNISIPSDMVGCIIGRGGSKISEIRRSS 311
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 141/308 (45%), Gaps = 38/308 (12%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I++ LR+ESGAKI I D A P +R++ +S S D + G G+
Sbjct: 13 KIGSVIGKGGSIIKTLRQESGAKIKIAD-AIPGVDERVILIS-STDRGNDRG--RGKDGN 68
Query: 86 TLWVT-SVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
+ +T + + + + + +E I+ + E Q + +L++P G L+GKGG
Sbjct: 69 SEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIGCLLGKGGK 128
Query: 145 KIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
I+ +R +GA ++V D LP + T+ +V V G+ T+ +A L+ I LQ
Sbjct: 129 IIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKA-----LLFISARLQEN 183
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGK-----KQPHPLAGLAVLGI 255
P Q+Y VPV + K K + GL +
Sbjct: 184 PPRDRP----------------QSYAAPAPAFVPVTDYLAKDSYRSKGTGHVFGLGPEPL 227
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
EG T + +R G+D+G++ + ++ D G VIGK GS + +R+
Sbjct: 228 EGRSWTISSGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRK 287
Query: 316 ISGAQINI 323
+GA+I I
Sbjct: 288 DTGARIKI 295
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 30/168 (17%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
++I +IG GG I+ LRK++GA+I I + A P +R++ VS ++E PG
Sbjct: 269 DKIGSVIGKGGSIIHNLRKDTGARIKIAN-AVPGSDERVIIVS---------ALE--LPG 316
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
D+ A M + M + +L++P G L+GKGG
Sbjct: 317 --------DSFSPALEAMIQVQSRITAE---MGGDKDGIITTRLLVPTNQIGCLLGKGGS 365
Query: 145 KIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQI 188
I+D+R + AN++V D LP + T+ +V + G+ +A++Q+
Sbjct: 366 IIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQV 413
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 64/202 (31%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG------ACP-DRIVTVSGSV---------- 70
N+I CL+G GG I+ ++R+ +GA+I + A P D +V VSG V
Sbjct: 117 NQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFI 176
Query: 71 ---------------------------DNSSTSSVETGYPGHTL-----------WVTSV 92
D + S + GH W S
Sbjct: 177 SARLQENPPRDRPQSYAAPAPAFVPVTDYLAKDSYRSKGTGHVFGLGPEPLEGRSWTISS 236
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
N+ RS E R+ EN L +L+ P+ GS+IGKGG I ++R
Sbjct: 237 GNLSLDRQDNRRSKE----GRDSGEN----ELVFRLLCPSDKIGSVIGKGGSIIHNLRKD 288
Query: 153 SGANVQVASDMLPMSTERIVTV 174
+GA +++A + +P S ER++ V
Sbjct: 289 TGARIKIA-NAVPGSDERVIIV 309
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 93/244 (38%), Gaps = 75/244 (30%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV----HGNPDTI 181
+++ PA GS+IGKGG IK +R SGA +++A D +P ER++ + GN
Sbjct: 5 FRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIA-DAIPGVDERVILISSTDRGN---- 59
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGK 241
G+ + E P QE K
Sbjct: 60 --------------------------------------DRGRGKDGNSEELTPAQEALFK 81
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGC 301
+A + GI+G S ++ V T +++ ++ GC
Sbjct: 82 VHARIIADVETSGIDG--------------------SDQEEEPSQQVVTRLLVPNNQIGC 121
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTE------SHKKMFHIQGCQEAVSLAQYLINMCIE 355
++GK G + ++RQ +GAQI + + ++ + G + +L + L+ +
Sbjct: 122 LLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSG--DVSTLKKALLFISAR 179
Query: 356 LQKN 359
LQ+N
Sbjct: 180 LQEN 183
>gi|393218460|gb|EJD03948.1| hypothetical protein FOMMEDRAFT_140050 [Fomitiporia mediterranea
MF3/22]
Length = 347
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 31/183 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
+T+R L V+ + +IG GG V LR E+G K ++ P +R++TVSG V+
Sbjct: 37 LTLRAL----VSTKDAGVIIGKGGKNVADLRDETGVKAGVSK-VVPGVHERVLTVSGDVE 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V AY + L D P ++L+I
Sbjct: 92 K----------------------VAKAYRLIIAQLIDASPPSP-TTTSPPSNTSIRLLIS 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
G++IG+GG KIK I+D SGA + + DMLP STERIV V G+ D I AI QI
Sbjct: 129 HNLMGTIIGRGGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGSADAIGLAIEQIGKC 188
Query: 192 LIE 194
L+E
Sbjct: 189 LLE 191
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+ G+++ EIR++SG++I+I E+ ++MF I G +A A +L
Sbjct: 265 ISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHDETGERMFTIVGTPQANEKALFL 324
Query: 350 INMCIELQKNNTTNTSDNPE 369
+ +E +K E
Sbjct: 325 LYNQLESEKERRVGREAQQE 344
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
IP+ G +IG+GG KI +IR LSG+ + +A + ER+ T+ G P +A++
Sbjct: 267 IPSDMVGCIIGRGGTKITEIRRLSGSKISIAKTPHDETGERMFTIVGTPQANEKALF 323
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 109 YHINRNRMENCS---PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP 165
+++ + C + L L+ ++ G +IGKGG + D+RD +G V S ++P
Sbjct: 19 FYLRSTSLRFCRGPIKETLTLRALVSTKDAGVIIGKGGKNVADLRDETGVKAGV-SKVVP 77
Query: 166 MSTERIVTVHGNPDTISQAIYQICLVLIEC 195
ER++TV G+ + +++A I LI+
Sbjct: 78 GVHERVLTVSGDVEKVAKAYRLIIAQLIDA 107
>gi|408395856|gb|EKJ75028.1| hypothetical protein FPSE_04740 [Fusarium pseudograminearum CS3096]
Length = 372
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 94/200 (47%), Gaps = 35/200 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R + S E +IG GG V LR E+G K ++ DR++T++G D
Sbjct: 47 LTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDA 102
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLKLV 129
+ AY + R+L + +++ P+ KL+
Sbjct: 103 ----------------------ISRAYAIVARALLEGAPAMGMGGVVQSNGTHPI--KLL 138
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +AI++IC
Sbjct: 139 ISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAIWEIC 198
Query: 190 LVLIECTLQVVKGAVIPYEP 209
L++ Q G V+ Y P
Sbjct: 199 KCLVD-DWQRGTGTVL-YNP 216
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G
Sbjct: 284 ENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGT 343
Query: 340 QEAVSLAQYLINMCIELQK 358
+A A +L+ +E +K
Sbjct: 344 AKANESALFLLYENLEAEK 362
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IPA G +IG+ G KI +IR SGA + +A + ER+ T+ G A++
Sbjct: 294 ISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALF 352
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 34/180 (18%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG ++RLR++ A +++ D P+R++T+ ++ T+
Sbjct: 91 AIIGKGGSNIKRLRQDYKASVTVPDSTSPERVLTIGANLG------------------TA 132
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
++ V + LEDY +N +C +++L++ + G +IG+ G KIK++R+
Sbjct: 133 LECVLD----IIPKLEDYKNYKNNDFDC-----EMRLLVHQSQAGCIIGRAGFKIKELRE 183
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV--KGAVIPYEP 209
+GA ++V S P STER+V + G P + C+ I LQ KG PY+P
Sbjct: 184 RTGAQIKVYSQCCPESTERVVAIGGKPKIVVD-----CIETIHDLLQTAPPKGPNQPYDP 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
T++ + D+AG +IGK G+R+ EIR+ S AQI I G S+ ++ I G E + AQ+
Sbjct: 473 TQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITITGTHEQIQSAQF 532
Query: 349 LI 350
L+
Sbjct: 533 LL 534
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I++IR S A + V + LP S +RI+T+ G + I A +
Sbjct: 474 QVTIPKDLAGAIIGKGGARIQEIRRQSNAQI-VIDEGLPGSNDRIITITGTHEQIQSAQF 532
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 159/338 (47%), Gaps = 36/338 (10%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSG 68
+D ++ R L S V + +IG G ++ +R+E+ A+I + D C +R++T+
Sbjct: 39 DDLVVVYRILCPSGV----MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFC 94
Query: 69 SV-DNSSTSSVETGYPGHTLWVTSV-DNVCTAYNFMCRSL----EDYHINRNRMENCSPQ 122
SV + +E +++ + S D + ++ + SL E+ I+R+ + C
Sbjct: 95 SVTEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIREC--- 151
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDML-------PMSTERIVTVH 175
+L++P++ C ++IGK G IK IR + ANV+V S + M + IV +
Sbjct: 152 ----RLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLIS 207
Query: 176 GNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYTLHGEYAV 233
G +++ +A++ + ++ +V IP + + + A +I S Y G Y
Sbjct: 208 GESESVKKALFAVSAIM----YKVSPREQIPLDTTVQEVPASIIIPSDLSIYPQGGLY-- 261
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-GKDTGDDFVETEI 292
P Q+ + + + + L +G G ++ P + + S V G G + + + ++
Sbjct: 262 PNQDPIFQHGANVSSFIGTLP-QGYGESAANPMPVFSASALPVVHGFGGSSKSEKLVIKV 320
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH 330
+ + G VIGK GS + IRQ SG+ I ++ +H
Sbjct: 321 ICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANH 358
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 146/353 (41%), Gaps = 63/353 (17%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGAC---PDRIVTVSGSVDNSSTSSVETGYPG 84
++I +IG GG ++ +R+ SG+ I + D D ++TV+ + S+
Sbjct: 325 SKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSM------ 378
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
++E + + ++ + + ++++L++P+ G +IGK G
Sbjct: 379 --------------------AVEAVLLLQEKINDEDEEKVKMQLLVPSKVIGCIIGKSGS 418
Query: 145 KIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
I +IR + AN+ ++ + P + +V + G + A+ QI L L + L+
Sbjct: 419 IISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDR 478
Query: 201 K-GAVIPYEPKTMNAGPVILSGGQAYT---LHGEYAVPVQEVAG---KKQPHPLAGLAVL 253
+ G+ +P + S G + T L + V +VA ++P + +++L
Sbjct: 479 EIGS--RNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSML 536
Query: 254 ----GIEGIGSTSL-------TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
G+ G GS + + + L G +S E+ + + G V
Sbjct: 537 PSSGGLYGYGSFPVGNNSYGSKSSYSSNLYGGLPQS---------TTMEVRIPANAVGKV 587
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCI 354
+G+ G L IR+ISGA I I SH ++ I G E A+ L I
Sbjct: 588 MGRGGGNLDNIRRISGAMIEISDSKNSHGGRIALISGTPEQKRTAENLFQAFI 640
>gi|344231257|gb|EGV63139.1| hypothetical protein CANTEDRAFT_93908 [Candida tenuis ATCC 10573]
Length = 562
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 26/185 (14%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E ++G G + +R + K+ ++D P+RIVTV GS +N
Sbjct: 149 VKEAGLIVGKKGEQINHIRDRANVKVFVSDNIKGVPERIVTVRGSAEN------------ 196
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
V A+ R++ D + N S L+L+IP G +IGK G
Sbjct: 197 ----------VAKAFGLAVRAILDEPEDEASSINSSS--YDLRLLIPHPLVGYIIGKQGS 244
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K ++I + S A ++ A LP ST+RI+ ++G D I A+Y + V++E + K +
Sbjct: 245 KFREIEENSAAKLKAAETPLPYSTDRILLINGVSDAIHIAVYYVAQVVLEHKDALSKQKI 304
Query: 205 IPYEP 209
+ Y P
Sbjct: 305 VFYNP 309
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 115 RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPMSTERIVT 173
+ E P + ++ P G ++GK G +I IRD ANV+V SD + ERIVT
Sbjct: 132 QREKEDPTVVSFRMYCPVKEAGLIVGKKGEQINHIRDR--ANVKVFVSDNIKGVPERIVT 189
Query: 174 VHGNPDTISQAI 185
V G+ + +++A
Sbjct: 190 VRGSAENVAKAF 201
>gi|406866101|gb|EKD19141.1| KH domain RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 372
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 99/216 (45%), Gaps = 38/216 (17%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ + +T+R + S E +IG G V LR E+GAK ++
Sbjct: 33 DGEPLPKTDEEYGESQLTLRAIVSSK----EAGVIIGKAGKNVADLRDETGAKAGVSKVV 88
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + R+L +
Sbjct: 89 QGVHDRVLTIAGGCEA----------------------ISKAYAIVARALLEGAPQMGMG 126
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+ P+ KL+I G++IG+ G KIK I+D SG + +MLP STERIV
Sbjct: 127 GVVSTSGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDASGVRMVAQKEMLPQSTERIVE 184
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ G P+ I +AI++IC LI+ Q G V+ Y P
Sbjct: 185 IQGTPEGIQKAIWEICKCLID-DWQRGTGTVL-YNP 218
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G+++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 284 ENGEEYQTQNISIPSDMVGCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGT 343
Query: 340 QEAVSLAQYLINMCIELQK 358
+A A YL+ +E +K
Sbjct: 344 TKANEAALYLLYENLEAEK 362
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IG+ G KI +IR SGA + +A + ER+ T+ G A+Y
Sbjct: 294 ISIPSDMVGCIIGRAGSKISEIRKSSGARISIAKAPHDDTGERMFTIMGTTKANEAALY 352
>gi|328768620|gb|EGF78666.1| hypothetical protein BATDEDRAFT_26534 [Batrachochytrium
dendrobatidis JAM81]
Length = 493
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 94/190 (49%), Gaps = 37/190 (19%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVS 67
E I MR L ++ E +IG GG V +R +G++++++ G P DR+VTV
Sbjct: 119 ESRPIRMRSL----ISPKEAGVVIGKGGSHVVEIRDTTGSRVTVS-GQVPGVFDRVVTVL 173
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQP--L 124
G+ + + AY + L H N +N PQ +
Sbjct: 174 GAAEANGR----------------------AYMMISTKLAGQQHDN----QNTDPQSRTV 207
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L++P + G +IG+ G +IK+I+++SG V D LP STER+VTV G P + A
Sbjct: 208 TLRLLVPQSRIGYIIGRQGVRIKEIQEVSGCRVLAQGDPLPNSTERVVTVIGTPSCLEIA 267
Query: 185 IYQICLVLIE 194
+ +ICL++ E
Sbjct: 268 VTRICLLVGE 277
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGGCKI ++R SG V++ D P R++T+ G D +S+A +
Sbjct: 419 QITIPDECVGAIIGKGGCKINEVRISSGCQVKIG-DPQPGQRRRVITLTGTADAVSKAQF 477
Query: 187 QICLVLIECTLQ 198
+ L +E Q
Sbjct: 478 -MLLARVEQESQ 488
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 279 GGKDTGDDFVETE-IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHI 336
GG D + E I + D+ G +IGK G ++ E+R SG Q+ I +++ +
Sbjct: 406 GGVGASDGVTKVEQITIPDECVGAIIGKGGCKINEVRISSGCQVKIGDPQPGQRRRVITL 465
Query: 337 QGCQEAVSLAQYLINMCIELQKNN 360
G +AVS AQ+++ +E + N
Sbjct: 466 TGTADAVSKAQFMLLARVEQESQN 489
>gi|393908932|gb|EFO19357.2| hypothetical protein LOAG_09137 [Loa loa]
Length = 265
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 128/269 (47%), Gaps = 43/269 (15%)
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
V +V+NV + +++ H N++R +LK+++ +H G++IG+GG +IK
Sbjct: 25 LVATVENVVRCVEMIIARIDEVHDNQDRDS-------ELKVLVHQSHAGAVIGRGGSRIK 77
Query: 148 DIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV--VKGAVI 205
++R+ +G +++V S+ P STERI+ ++G P+ I CLV I TL+ +KG
Sbjct: 78 ELREENGVDLKVYSECCPQSTERIIQINGKPEKIVA-----CLVTIISTLKEIPIKGPSR 132
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP 265
PYE ++ PV+ + EY + G+ G+ G G S P
Sbjct: 133 PYE--SIFFDPVVAN---------EYGGYAGDHGGR------------GMRGYGPRSRIP 169
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
G +T ++ + +++ G +IG+ G R+ IR SGA I I
Sbjct: 170 LPPYGPVPPAYDDGPLET------AQVTVPNELGGTIIGRGGERIRRIRDESGAHIKIEE 223
Query: 326 GTESHKKMFHIQGCQEAVSLAQYLINMCI 354
+ +++ I G + +AQ+L+ C+
Sbjct: 224 EDPNGERIITISGTPSQIEMAQFLLQQCV 252
>gi|449551271|gb|EMD42235.1| hypothetical protein CERSUDRAFT_110766 [Ceriporiopsis subvermispora
B]
Length = 324
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 89/189 (47%), Gaps = 36/189 (19%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
+ ++T+R L V+ + +IG G V LR +G K ++ +R++TVSGS
Sbjct: 25 NEVLTLRAL----VSTKDAGVIIGKAGKNVADLRDHTGVKAGVSKVIPGVHERVLTVSGS 80
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP----QPLQ 125
V+ V AY + L + N SP Q
Sbjct: 81 VEG----------------------VAKAYALIVSQL----VAANPSSPVSPTVPSQQTA 114
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++L+I GS+IG+ G KIK I+D SGA + + DMLP STERIV V G D+I +AI
Sbjct: 115 IRLLISHNLMGSVIGRNGLKIKAIQDASGARMVASKDMLPQSTERIVEVQGASDSIGRAI 174
Query: 186 YQICLVLIE 194
+I L+E
Sbjct: 175 EEIGRCLLE 183
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 121/294 (41%), Gaps = 59/294 (20%)
Query: 120 SPQP-----LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV 174
SP P L L+ ++ G +IGK G + D+RD +G V S ++P ER++TV
Sbjct: 19 SPSPVGNEVLTLRALVSTKDAGVIIGKAGKNVADLRDHTGVKAGV-SKVIPGVHERVLTV 77
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSG---GQAYTLHGEY 231
G+ + +++A I L+ V P P A +++S G +G
Sbjct: 78 SGSVEGVAKAYALIVSQLVAANPS---SPVSPTVPSQQTAIRLLISHNLMGSVIGRNGLK 134
Query: 232 AVPVQEVAGKKQ-------PHPLA------------GLAVLGI---------EGIGSTSL 263
+Q+ +G + P G A+ I G+G+
Sbjct: 135 IKAIQDASGARMVASKDMLPQSTERIVEVQGASDSIGRAIEEIGRCLLEDWERGLGTVLF 194
Query: 264 TPAALAALSGSRVKSGGKDTGD-----------------DFVETEIVLTDDIAGCVIGKA 306
P + S SG + GD + I + D+ GC+IG+
Sbjct: 195 HPGSGEDRSRRSGNSGRRTNGDVRGRTSPSPHSPSSQPTNLRTQNISIPSDMVGCIIGRN 254
Query: 307 GSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
G+++ EIR++SG++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 255 GTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALFLLYNQLESEK 308
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 147/364 (40%), Gaps = 72/364 (19%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E S +IG G ++ LR+++ A+I +++ +RI++V G +N
Sbjct: 210 VKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPAEN------------ 257
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQLKLVIPATHCGS 137
V A+ + R++ +E +P LK++IP G
Sbjct: 258 ----------VAKAFGLITRAI---------LEEPEDEPASIMSRQYNLKVLIPHPMVGY 298
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTL 197
+IGKGG K ++I + S A ++ A LP ST+R+++V G D I AIY I V+IE
Sbjct: 299 IIGKGGSKFREIEENSAAKLKAAEQPLPNSTDRVLSVLGVGDAIHIAIYYISQVIIEHKD 358
Query: 198 QVVKGAVIPYEP-------KTMNAGPVILSGGQAY----TLHGEYAVPVQEVAGKKQPHP 246
+ K ++ Y P TM P G + G P Q ++Q P
Sbjct: 359 ILKKHKIVYYTPGNNQLMNNTMGLIPNNTYGNTGIIGNDPIQG--GAPFQHNY-QRQFQP 415
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG---DDFVETEIVLTDDIAGCVI 303
A + + S T + G + S G D F E V +I G VI
Sbjct: 416 SAPSHNQITTPVPTQSYTDEHGNTMIGDVITSVPVPAGTGTDKFSEDVFVANTNI-GSVI 474
Query: 304 GKAGSRLLEIRQISGAQINIHTGTESHK-------------KMFHIQGCQEAVSLAQYLI 350
GK G+ + +IR+ SG + + H+ + + G ++ A YLI
Sbjct: 475 GKGGNNIKQIRESSGCSY-VKIEPDQHQTIMLGRGRGLTSIRKLTLTGSINSIQTAIYLI 533
Query: 351 NMCI 354
N I
Sbjct: 534 NQRI 537
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 100 NFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV 159
++ R + ++ R P + ++ P +IGK G I +R+ + A +QV
Sbjct: 182 DYTSRPMANHQAERE----SDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQV 237
Query: 160 ASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE---------CTLQVVKGAVIPYEPK 210
+ ++ + ERI++V G + +++A I ++E + Q +IP+
Sbjct: 238 SENIKDVQ-ERIISVKGPAENVAKAFGLITRAILEEPEDEPASIMSRQYNLKVLIPHP-- 294
Query: 211 TMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIG 259
G +I GG + E + ++ +QP P + VL + G+G
Sbjct: 295 --MVGYIIGKGGSKFREIEENS--AAKLKAAEQPLPNSTDRVLSVLGVG 339
>gi|401838485|gb|EJT42099.1| PBP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 416
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 166/378 (43%), Gaps = 58/378 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+ M CL V S ++G G + R++ E+ A+I++++ P+RI+ V G+ D+
Sbjct: 72 LRMLCL------VKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTCDD 125
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V AY + R+L + H N + E+ + + L+IP
Sbjct: 126 ----------------------VAKAYGMIVRALLEEHENESEEEDIE---VSINLLIPH 160
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G +IGK G ++++I DLS A + + + L +S +RI+T++G PD I A + + L
Sbjct: 161 HLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPDAIHIATFYVGQTL 220
Query: 193 ----IECTLQVVKGAVIPYEPKTMNAGPVILSGGQA----YTLHGEYAVPVQEVAGKKQP 244
IE + +K ++ Y+P N+ V+L Q+ + + +Y + ++ +
Sbjct: 221 LNFQIESPQKKLKRSIF-YQPTQFNS--VLLDHSQSNAVLHQRNHQYHPNDKLLSCRPNR 277
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK-------DTGD------DFVETE 291
+L + T+ + A A + V + D G + + E
Sbjct: 278 KFSVSSTLLSMAPPQYTTASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLSMNLFQQE 337
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I + ++ G VIGK G + +++ +G I + E S ++ I+G A A LI
Sbjct: 338 IFIDENFVGNVIGKDGKHINSVKESTGCSIIVQDSVEGSSERRLSIRGTFMASQAAIMLI 397
Query: 351 NMCIELQKNNTTNTSDNP 368
+ IE+ + N +P
Sbjct: 398 SNKIEIDRLNAERKRRSP 415
>gi|321455064|gb|EFX66209.1| hypothetical protein DAPPUDRAFT_332423 [Daphnia pulex]
Length = 384
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 152/380 (40%), Gaps = 80/380 (21%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L +S V +IG GG + +LR E+ A I + D P+RI+T+ G++D
Sbjct: 35 LRLLVYSKV----AGSIIGKGGSNISKLRTENHATILLPDCPGPERILTIQGNLD----- 85
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
+V NV N + E I R +L++ + G
Sbjct: 86 --------------AVINVLQ--NVLPSLEEVSKIRGERTGRVGDS--DARLLVHQSQIG 127
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IG+GG K+K++R+ +G + V S P ST+RIV + G P + I QI ++ E
Sbjct: 128 CIIGRGGAKVKELRESTGTRITVYSVCCPRSTDRIVQILGKPSDCGECIKQIIALVKESQ 187
Query: 197 LQVVKGAVIPYEPKTMNAG-----------------------PVILSGGQAYTLHGEYAV 233
VKG + Y P + + + G E +
Sbjct: 188 ---VKGPIDQYNPYNYDESFAQEYGGYGEGGVLVGMGAGGGGGGMRNPGGPRGPERELKI 244
Query: 234 P--VQEVAGKKQPHPLAGLAVLGIE-GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
P V++V P PL+ G G L P +L + G V+ G G + +
Sbjct: 245 PTLVRDV-----PRPLSPPRHRGYRAGSYERDLPPPSLMGV-GQPVRGG---PGGMYHDE 295
Query: 291 EIVLTDD--------------IAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
I DD +AG +IGK G+R+ +IR SGA I I S +++
Sbjct: 296 RIFREDDRGHTETTQVSIPKDLAGAIIGKGGARIRKIRGDSGASITIDEPRPGSTERIIT 355
Query: 336 IQGCQEAVSLAQYLINMCIE 355
I G + AQYL+ +
Sbjct: 356 ISGSSHQIWKAQYLLQQSVR 375
>gi|12239354|gb|AAG49443.1|AF141340_1 LYST-interacting protein LIP4 [Homo sapiens]
Length = 276
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D G E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G
Sbjct: 77 GLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITG 136
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
+++LAQYLI C+E K+ + T + PADL A S +TA
Sbjct: 137 SPVSIALAQYLITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 180
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ ++P G +IG+ G KI +IR +SGA++++ + + ER VT+ G+P +I+ A Y
Sbjct: 88 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAE-GAGERHVTITGSPVSIALAQY 146
Query: 187 QICLVL 192
I L
Sbjct: 147 LITACL 152
>gi|170060300|ref|XP_001865740.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167878804|gb|EDS42187.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 294
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 263 LTPAALAALSGSRVKSGGKDTGDDFVET---------EIVLTDDIAGCVIGKAGSRLLEI 313
L P ALAAL+GS++++ E+ + +D+ GC+IGK G+++ EI
Sbjct: 32 LNPTALAALAGSQLRTNNNRNAAVAQAAAAQVQSQSHEMTVPNDLIGCIIGKGGTKIAEI 91
Query: 314 RQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
RQISGA I I E + + I G ++V+LAQYLINM +ELQK N
Sbjct: 92 RQISGAMIRISNCEERDSGNTDRTITITGNPDSVALAQYLINMSVELQKAN 142
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD+++ A
Sbjct: 69 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSGNTDRTITITGNPDSVALA 128
Query: 185 IYQICL 190
Y I +
Sbjct: 129 QYLINM 134
>gi|365761950|gb|EHN03570.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 165/378 (43%), Gaps = 58/378 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+ M CL V S ++G G + R++ E+ A+I++++ P+RI+ V G+ D+
Sbjct: 72 LRMLCL------VKHASLIVGHKGATISRIKSETSARINVSNNIRGVPERIIYVRGTCDD 125
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V AY + R+L + H N + E+ + + L+IP
Sbjct: 126 ----------------------VAKAYGMIVRALLEEHENESEEEDIE---VSINLLIPH 160
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G +IGK G ++++I DLS A + + + L +S +RI+T+ G PD I A + + L
Sbjct: 161 HLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTISGVPDAIHIATFYVGQTL 220
Query: 193 ----IECTLQVVKGAVIPYEPKTMNAGPVILSGGQA----YTLHGEYAVPVQEVAGKKQP 244
IE + +K ++ Y+P N+ V+L Q+ + + +Y + ++ +
Sbjct: 221 LNFQIESPQKKLKRSIF-YQPTQFNS--VLLDHSQSNAVLHQRNHQYHPNDKLLSCRPNR 277
Query: 245 HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGK-------DTGD------DFVETE 291
+L + T+ + A A + V + D G + + E
Sbjct: 278 KFSVSSTLLSMAPPQYTTASVANATAFHPNFVIPNVRILDAPVIDQGPSNHLSMNLFQQE 337
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I + ++ G VIGK G + +++ +G I + E S ++ I+G A A LI
Sbjct: 338 IFIDENFVGNVIGKDGKHINSVKESTGCSIIVQDSAEGSSERRLSIRGTFMASQAAIMLI 397
Query: 351 NMCIELQKNNTTNTSDNP 368
+ IE+ + N +P
Sbjct: 398 SNKIEIDRLNAERKRRSP 415
>gi|406608142|emb|CCH40576.1| Poly(rC)-binding protein 2 [Wickerhamomyces ciferrii]
Length = 457
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 158/413 (38%), Gaps = 88/413 (21%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDR 62
K+ +D T + R L V E + ++G GG + +++ SG +I++++ +R
Sbjct: 77 KVHQDGDPTYVHFRML----CQVKEAALVVGKGGEKISHIKEVSGTRINVSENIRGVTER 132
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
++ V G +N V A+ M R++ D N
Sbjct: 133 VIHVRGPAEN----------------------VAKAFGLMTRAILDEE--ENVPSTVDSH 168
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
L+L+IP G +IGK G K K+I + S A + +S +P ST+R +T+ G D+I
Sbjct: 169 HFALQLLIPHQVIGYVIGKQGGKFKEIEENSAAKLNASSHSMPFSTDRCLTIAGVADSIH 228
Query: 183 QAIYQICLVLIECTLQVVKGAVIPYEPKT--------------------------MNAGP 216
A Y + ++ KG VI Y+P + P
Sbjct: 229 IATYYVAQTVLTHKPN-FKGKVIFYDPGQQHQHHQQQQQQHLNLPQHHLQHHQPGLPPNP 287
Query: 217 VILSG----GQAYTLHGEYAVPVQEVA---------GKKQPHPLAGLAVLGIEGIGSTSL 263
++ +G GQ + A GK Q P + V +
Sbjct: 288 LLFNGMMNFGQLPQFDQRQLLQFNNFARPQHNRNHNGKFQQRPPFSMNV---------PI 338
Query: 264 TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
P L S S G G + EI + ++ G VIGK+G + I+ SG++I I
Sbjct: 339 NPLTLPLAS-----STGGVGGSPQITQEIFIPNEYVGNVIGKSGKNIKLIKDTSGSKIQI 393
Query: 324 -HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDA 375
ES ++ + G A +LIN IE K + + + P + ++
Sbjct: 394 ADPNPESKERKITLVGTSAGNQTAIFLINNRIESDKRSNEAKAKSAAPQNHES 446
>gi|449667206|ref|XP_002160219.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Hydra
magnipapillata]
Length = 393
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 103/224 (45%), Gaps = 38/224 (16%)
Query: 3 GNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
G G K+ D+ +T+R L S +IG GG ++RLR E A +++ D +R
Sbjct: 16 GGGAKKMRGDS-VTLRFLLMSK----HAGGIIGKGGQTIKRLRSEYSATVNVPDSNSSER 70
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
+++++ S +N A +C L +H ++ Q
Sbjct: 71 VLSIAASQEN-------------------------AIKILCECLPLFHEPPYQVSGGGSQ 105
Query: 123 ----PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
++ ++ ++ G +IG+ G KIK++R+ + ANV+V + LP STER+V + G
Sbjct: 106 NQKNEFEVDFLVHSSQVGGIIGRSGFKIKELREQTNANVKVFQECLPNSTERVVALGGGE 165
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIPYEP-KTMNAGPVILSG 221
I A+ +I ++ E +KG + Y+P + N G SG
Sbjct: 166 AEIVDALKKILEIMQESP---IKGNIALYDPSQEWNGGQDNYSG 206
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT-GTESHKKMFHIQGCQEAVS 344
D T++ + +D+AG +IG+ G R+ IRQ SGA I I G + ++ I G Q+ +
Sbjct: 313 DIQTTQVTIPNDLAGAIIGRGGERIRNIRQRSGADIKIQDPGEGKNDRVITITGTQDQIQ 372
Query: 345 LAQYLINMCIE 355
Q+L+ +
Sbjct: 373 YGQFLMQQSVR 383
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IG+GG +I++IR SGA++++ D +R++T+ G D I +
Sbjct: 318 QVTIPNDLAGAIIGRGGERIRNIRQRSGADIKI-QDPGEGKNDRVITITGTQDQIQYGQF 376
>gi|312096639|ref|XP_003148731.1| hypothetical protein LOAG_13173 [Loa loa]
Length = 101
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 26/125 (20%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
E+ +IG G ++ +R +SGAKI+I+DG+CP+RIVT++GS TG
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGS----------TG------- 43
Query: 89 VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-PLQLKLVIPATHCGSLIGKGGCKIK 147
+ A+ +C L+ + + N P+ P+ ++L++PAT CG +IGKGG KIK
Sbjct: 44 -----TINKAFIMICAKLQQ---DLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIK 95
Query: 148 DIRDL 152
+IR++
Sbjct: 96 EIREV 100
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIEC 195
GS+IGK G IK IRD SGA + ++ P ERIVT+ G+ TI++A IC L +
Sbjct: 3 GSIIGKRGDHIKLIRDQSGAKINISDGSCP---ERIVTITGSTGTINKAFIMICAKLQQ- 58
Query: 196 TLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV 238
LQ + + IP P TM +I+ Q + G+ ++E+
Sbjct: 59 DLQALPNS-IPKPPITMR---LIVPATQCGCIIGKGGSKIKEI 97
>gi|361123942|gb|EHK96076.1| putative RNA-binding protein rnc1 [Glarea lozoyensis 74030]
Length = 376
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 38/216 (17%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ + +T+R + S E +IG GG V LR E+G K ++
Sbjct: 36 DGEPLPKTDEEYAESQLTLRAIVSSK----EAGVIIGKGGKNVADLRDETGCKAGVSKVV 91
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + ++L +
Sbjct: 92 QGVHDRVLTIAGGCEA----------------------ISKAYAIVAKALLEGAPQMGMG 129
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
+ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 130 GVVAQSGSHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 187
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
V G P+ I +A+++IC L++ Q G V+ Y P
Sbjct: 188 VQGTPEGIQKAVWEICKCLVD-DWQRGTGTVL-YNP 221
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+AGS++ EIR+ SGA+I+I E+ ++MF I G
Sbjct: 288 ENGEELQTQNISIPSDMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMFTIMGS 347
Query: 340 QEAVSLAQYLINMCIELQK 358
Q+A A YL+ +E +K
Sbjct: 348 QKANETALYLLYENLEAEK 366
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IG+ G KI +IR SGA + +A + ER+ T+ G+ A+Y
Sbjct: 298 ISIPSDMVGCIIGRAGSKISEIRKTSGARISIAKSPHDETGERMFTIMGSQKANETALY 356
>gi|3402264|emb|CAA63936.1| heterogeneous nuclear ribonucleoprotein [Sus scrofa]
Length = 135
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 76/147 (51%), Gaps = 31/147 (21%)
Query: 213 NAGPVILSGGQAYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPA 266
++ PVI +GGQAYT+ G+YA+P + ++A ++ P+ G+T +
Sbjct: 1 SSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH---------GNTGFS-- 49
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I
Sbjct: 50 -------------GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 96
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINM 352
E S + I G ++SLAQYLIN+
Sbjct: 97 VEGSTDRQVTITGSAASISLAQYLINV 123
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S Q +L IP G +IG+ G KI +IR +SGA +++A + + ST+R VT+ G+
Sbjct: 52 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGS 110
Query: 178 PDTISQAIYQICLVL 192
+IS A Y I + L
Sbjct: 111 AASISLAQYLINVRL 125
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 42/217 (19%)
Query: 7 GKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIV 64
G+ + TLI MR L V+ E +IG G V +R+++ K ++ +R++
Sbjct: 136 GQAEAPTLI-MRAL----VSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVL 190
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP- 123
TV+G + V A+ +C+++ D N + + N SP
Sbjct: 191 TVTGQISG----------------------VARAFGLICQTIMD---NSSGIPNDSPSTY 225
Query: 124 -------LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
L L+L+I + G +IGK G KIK I+ SG + + ++LP STER+V + G
Sbjct: 226 TGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMAASKELLPQSTERLVEISG 285
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
P+ + +A+ +I L+E + V I + P +N
Sbjct: 286 RPEQVEKAVAEIAKALVEDEAKAV--GTIAFHPANLN 320
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IGK G ++ +IR+ SG++I+I E+ ++MF I G + A +L
Sbjct: 443 ISIPSDMVGCIIGKGGQKINDIRKSSGSKISIAKTAHDETGERMFTITGTAQNNETALFL 502
Query: 350 INMCIELQKNN 360
+ +E +K
Sbjct: 503 LYGQLENEKER 513
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IGKGG KI DIR SG+ + +A + ER+ T+ G A++
Sbjct: 443 ISIPSDMVGCIIGKGGQKINDIRKSSGSKISIAKTAHDETGERMFTITGTAQNNETALF 501
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 24 SVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA---CPDRIVTVSGSVDNSSTS 76
S+ + + C+IG GG + +RK SG+KISI A +R+ T++G+ N+ T+
Sbjct: 444 SIPSDMVGCIIGKGGQKINDIRKSSGSKISIAKTAHDETGERMFTITGTAQNNETA 499
>gi|193785510|dbj|BAG50876.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D G E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G
Sbjct: 74 GLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITG 133
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
+++LAQYLI C+E K+ + T + PADL A S +TA
Sbjct: 134 SPVSIALAQYLITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 177
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIV 172
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+++ Q++S +P +T +V
Sbjct: 19 NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIREVTKLQ-QLSSHAVPFATPSVV 72
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ ++P G +IG+ G KI +IR +SGA++++ + + ER VT+ G+P +I+ A Y
Sbjct: 85 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIG-NQAEGAGERHVTITGSPVSIALAQY 143
Query: 187 QI--CL 190
I CL
Sbjct: 144 LITACL 149
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 40/198 (20%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTSSV 78
F V E S +IG G ++ LR+++ A+I +++ +RI+ V G +N
Sbjct: 204 FRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPAEN------ 257
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQLKLVIP 131
V A+ + R++ +E +P LK++IP
Sbjct: 258 ----------------VAKAFGLITRAI---------LEEPEDEPASIMSRQYNLKVLIP 292
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
G +IGKGG K ++I + S A ++ A LP ST+R+++V G D I AIY I V
Sbjct: 293 HPMVGYIIGKGGSKFREIEENSAAKLKAAEQPLPNSTDRVLSVLGVGDAIHIAIYYISQV 352
Query: 192 LIECTLQVVKGAVIPYEP 209
+IE + K ++ Y P
Sbjct: 353 IIEHKDILKKHKIVYYTP 370
>gi|390355846|ref|XP_003728637.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Strongylocentrotus purpuratus]
Length = 345
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 29/195 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T R L S N+ LI GG ++RLR + A +SI D + PDR++ + + +
Sbjct: 9 VTFRLLVSS----NKAGGLIAKGGQNIKRLRSDYNATVSIPDSSGPDRVLQIVANSKENG 64
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
+E P + R E + + C+ L +++ +
Sbjct: 65 LDIIEELIP------------------LIRE-EVSPFSDGEADPCT---TTLSVLVQTSQ 102
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G++IG+ G KIK++R+ + V+V + LP STE +V ++G PD + AI +I +
Sbjct: 103 VGAIIGRAGIKIKELRESTKTKVKVFQECLPCSTESLVQINGTPDAVLLAIGEI---YVT 159
Query: 195 CTLQVVKGAVIPYEP 209
C+ +KG+V+ Y+P
Sbjct: 160 CSEAPIKGSVLLYDP 174
>gi|430812290|emb|CCJ30285.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 341
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 132/306 (43%), Gaps = 62/306 (20%)
Query: 44 LRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMC 103
L++++GA+I +T+ V GSV+ T G P +V A++ +
Sbjct: 14 LQEKTGARIFLTEN--------VLGSVERILTC---IGTP---------KSVAKAFSLVL 53
Query: 104 RSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM 163
R L ++ + N P+ +++L IP LIGK G +I +I+ +S A++ + +
Sbjct: 54 RLLHSEDLDSVLISNDKPR--RVRLAIPHIFIEPLIGKHGSRINEIQKISRAHITASDSL 111
Query: 164 LPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ 223
LP+STER + ++G D I AI+ + + LI+ + Y P +M+ G + Q
Sbjct: 112 LPLSTERTLVIYGTEDAIYAAIFHVSITLIQQADHITNLQTCLYNPLSMHGGYGHPATFQ 171
Query: 224 AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT 283
+L+ P P+ +A A+ + +S TPA A++ ++ + +
Sbjct: 172 KVSLNDTMITPA-------NPYGIAPNAITQ-QNYQISSYTPADPQAVAAYNIQQQNQAS 223
Query: 284 GDDF--------------------------------VETEIVLTDDIAGCVIGKAGSRLL 311
+ +I + +D+ G +IGK G+++
Sbjct: 224 SHTTKQGQSQQLQQQTQQTQQTQQTQQSSQAAPGQPITQQIFIPNDMVGAIIGKGGTKIN 283
Query: 312 EIRQIS 317
EIRQ+S
Sbjct: 284 EIRQLS 289
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 35/193 (18%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L S V +IG GG + +LR + A I++ D P+R++T+S
Sbjct: 23 VRLLIPSKV----AGSIIGKGGQNITKLRSQYKASITVPDCPGPERMLTLS--------- 69
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
+ +D +C + +LE+ N E L L+++I + G
Sbjct: 70 -------------SDLDTICNIVTDVVPNLEENGGRVNGNE------LDLRMMIHQSQAG 110
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGK G KIK++R+ +GA +++ S++ P ST+RI+ + G P +I +I + LI+
Sbjct: 111 CVIGKAGYKIKELREKTGARIKIFSNVAPQSTDRIIQIVGEPSKCVDSIREI-ITLIKSN 169
Query: 197 LQVVKGAVIPYEP 209
+KG V PY+P
Sbjct: 170 --PIKGIVNPYDP 180
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMF 334
++GG+ G++ + +++ AGCVIGKAG ++ E+R+ +GA+I I + +S ++
Sbjct: 88 ENGGRVNGNEL-DLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKIFSNVAPQSTDRII 146
Query: 335 HIQG 338
I G
Sbjct: 147 QIVG 150
>gi|410074879|ref|XP_003955022.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
gi|372461604|emb|CCF55887.1| hypothetical protein KAFR_0A04520 [Kazachstania africana CBS 2517]
Length = 469
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 167/401 (41%), Gaps = 71/401 (17%)
Query: 10 DEDT---LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIV 64
D++T ++ M CL V E S ++GP G + +++K++ +I+++ P+R++
Sbjct: 90 DQNTNSIILRMLCL------VKEASLIVGPKGETISKMKKDTNCRINVSKNIKGVPERVI 143
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE---------DYHINRNR 115
V GS DN + + L V + T YN ++ E + IN N
Sbjct: 144 YVKGSCDNVAKA--------FGLLVRILSQKKTFYNGSSQNQERESQTDLDENNGINANE 195
Query: 116 M---ENCSP---QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE 169
+ E SP P L L+IP G +IGK G ++K+I +LS A + + L S +
Sbjct: 196 IKLTEKKSPILYYPATLHLLIPHHLMGYVIGKHGSRLKEIEELSSAKLIASPHQLLPSND 255
Query: 170 RIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVI-LSGGQAYTLH 228
RI+ + G PD I A + I + + I Y+P GPV + G Y+
Sbjct: 256 RILRITGVPDAIHIATFYIAQTFMGFKDVLRTNKAIFYQP-----GPVYTVLGTNNYSQV 310
Query: 229 GEYAVPVQE----------VAGKKQPHPLAGLAVL----GIEGIGSTSL----TPAALAA 270
+P+++ + + P A L + I S L TP ++A
Sbjct: 311 A--VLPLRQNNYHYMNRYNNNYRHRRSPKASLMAMVPSPTIPQYTSNELQVTYTPESVAN 368
Query: 271 LSG----------SRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQ 320
+ V++ VE EI + + G +IGK G + I++ +G
Sbjct: 369 ATSFVPKFTIPHVRIVENTMASQPMALVEQEIYINSNYVGNIIGKEGKHITSIKETTGCS 428
Query: 321 INIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
I I + E S ++ I+G A +I+ IE+ N
Sbjct: 429 IFIDSPVEGSKERKITIKGSAMGTQAAIMIISNKIEVDTTN 469
>gi|242021848|ref|XP_002431355.1| heterogeneous nuclear ribonucleoprotein, putative [Pediculus
humanus corporis]
gi|212516623|gb|EEB18617.1| heterogeneous nuclear ribonucleoprotein, putative [Pediculus
humanus corporis]
Length = 126
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 73/118 (61%), Gaps = 10/118 (8%)
Query: 245 HPLAGLAVLGIEGIGSTS---LTPAALAALSGSRVKSGG---KDTGDDFVETEIVLTDDI 298
+PLAGLA LG+ + +T+ L PAALAAL+GS++++ G+ E+ + +++
Sbjct: 8 NPLAGLAALGLPALNTTNTGGLNPAALAALAGSQLRTNNPSRNQQGNSQQTHEMTVPNEL 67
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLAQYLINM 352
GC+IGK G+++ EIRQ+SGA I I E + I G EAV+LAQYLINM
Sbjct: 68 IGCIIGKGGTKIAEIRQLSGAMIRISNSEEREGGNTDRTITIAGNPEAVALAQYLINM 125
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQA 184
++ +P G +IGKGG KI +IR LSGA +++++ + +T+R +T+ GNP+ ++ A
Sbjct: 60 EMTVPNELIGCIIGKGGTKIAEIRQLSGAMIRISNSEEREGGNTDRTITIAGNPEAVALA 119
Query: 185 IYQICL 190
Y I +
Sbjct: 120 QYLINM 125
>gi|409051686|gb|EKM61162.1| hypothetical protein PHACADRAFT_247591 [Phanerochaete carnosa
HHB-10118-sp]
Length = 326
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 84/183 (45%), Gaps = 28/183 (15%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVD 71
++T+R L V+ + +IG G V LR+ + K ++ +R++TV+GSV+
Sbjct: 27 VLTLRSL----VSTKDAGVIIGKAGKNVAELREATAVKAGVSKVIPGVHERVLTVTGSVE 82
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V AY + L S ++L+I
Sbjct: 83 G----------------------VAKAYAMIVNQLSSTSATSPVSPTPSSSQSSIRLLIS 120
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
GS+IG+ G KIK I+D SGA + +MLP STERIV VHG+ ++I +AI I
Sbjct: 121 HNLMGSVIGRSGLKIKAIQDSSGARMFAQKEMLPQSTERIVEVHGSAESIGRAIEDIGRA 180
Query: 192 LIE 194
L+E
Sbjct: 181 LLE 183
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG+ G+++ EIR++SG++I+I E+ ++MF I G EA A +L
Sbjct: 242 ISIPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALFL 301
Query: 350 INMCIELQKNN 360
+ +E +K
Sbjct: 302 LYNQLESEKER 312
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
IP+ G +IG+ G KI +IR LSG+ + +A + + ER+ T+ G P+ +A++
Sbjct: 244 IPSDMVGCIIGRNGTKITEIRRLSGSKISIAKEPHDETGERMFTIVGTPEANEKALF 300
>gi|353243541|emb|CCA75070.1| related to poly(rC)-binding protein 3 [Piriformospora indica DSM
11827]
Length = 631
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSG 68
+DTL T+R L V + +IG G V LR+++G K ++ +R+++V+G
Sbjct: 275 QDTL-TLRAL----VGTKDAGIIIGKAGKNVADLREQTGVKAGVSKVVAGVHERVLSVTG 329
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
SV V AY + + L + ++L
Sbjct: 330 SVQG----------------------VAKAYTTILQQLVTSSPSSTTAPANPSNHTIIRL 367
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
+I G++IG+ G KIK+I+D SGA + DMLP STERIV V G+P+ I +AI +I
Sbjct: 368 LISHNLMGTIIGRNGLKIKNIQDSSGARMVAQKDMLPQSTERIVEVQGSPEAIGKAIEEI 427
Query: 189 CLVLIE 194
L+E
Sbjct: 428 GKCLLE 433
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGCQ 340
+G I + D+ GC+IG+AG+++ EIR++SG++I+I G E+ ++MF I G
Sbjct: 538 SGQPLRTQSISIPSDMVGCIIGRAGTKITEIRRLSGSKISIAKGPHDETGERMFTIVGTP 597
Query: 341 EAVSLAQYLINMCIELQK 358
E+ A YL+ +E +K
Sbjct: 598 ESNEKALYLLYNQLESEK 615
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 120 SPQPLQLKLV-IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
S QPL+ + + IP+ G +IG+ G KI +IR LSG+ + +A + ER+ T+ G P
Sbjct: 538 SGQPLRTQSISIPSDMVGCIIGRAGTKITEIRRLSGSKISIAKGPHDETGERMFTIVGTP 597
Query: 179 DTISQAIY 186
++ +A+Y
Sbjct: 598 ESNEKALY 605
>gi|336376793|gb|EGO05128.1| hypothetical protein SERLA73DRAFT_174106 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389739|gb|EGO30882.1| hypothetical protein SERLADRAFT_455154 [Serpula lacrymans var.
lacrymans S7.9]
Length = 335
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 28/182 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+++R L V+ E +IG G V LR+++G K ++ +R++ +SGSV+
Sbjct: 30 LSLRAL----VSTKEAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLAISGSVEA 85
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V AY + L + S ++L+I
Sbjct: 86 ----------------------VAKAYTIITSQLVTSSSSLVSSPPPSLSHTVIRLLISH 123
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G++IG+ G KIK I+D+SGA + + DMLP STERIV V G P+ I +AI +I L
Sbjct: 124 NLMGTIIGRSGLKIKAIQDVSGARMVASKDMLPQSTERIVEVQGTPEAIGRAIEEIGRCL 183
Query: 193 IE 194
+E
Sbjct: 184 LE 185
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEAVSLAQYL 349
I + D+ GC+IG++GS++ EIR++SG++I+I E+ ++MF I G EA A +L
Sbjct: 254 ISIPSDMVGCIIGRSGSKITEIRRLSGSKISIAKAPHDETGERMFTIVGTPEANEKALFL 313
Query: 350 INMCIELQKNN 360
+ +E +K
Sbjct: 314 LYNQLESEKER 324
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 122 QPLQLK---LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
QP L+ + IP+ G +IG+ G KI +IR LSG+ + +A + ER+ T+ G P
Sbjct: 245 QPANLRTQNISIPSDMVGCIIGRSGSKITEIRRLSGSKISIAKAPHDETGERMFTIVGTP 304
Query: 179 DTISQAIY 186
+ +A++
Sbjct: 305 EANEKALF 312
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTIS 182
PL L+ ++ G +IGK G + D+R+ +G V S ++P ER++ + G+ + ++
Sbjct: 29 PLSLRALVSTKEAGVIIGKAGKNVADLREQTGVKAGV-SKVIPGVHERVLAISGSVEAVA 87
Query: 183 QA 184
+A
Sbjct: 88 KA 89
>gi|385305943|gb|EIF49885.1| kh domain rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 541
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 156/399 (39%), Gaps = 82/399 (20%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
D+ T + R L ++E + ++G GG ++++++ S A+I+++D P+R+++V
Sbjct: 151 DDPTYVHFRML----CTISEAATVVGKGGETIKKIKELSNARINVSDNLKGVPERVISVR 206
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
G + V A+ + R +N + Q L+
Sbjct: 207 GPAEY----------------------VAKAFGLIVRMQLGEPLNV--PSSLESQQYNLR 242
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+ P T G +IGK G + ++I + S A ++ +LP ST+R++ ++G D I A Y
Sbjct: 243 LLFPHTIMGYIIGKKGSRFREIEESSAAALKANDQILPASTDRVLNINGVADAIHIATYY 302
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTM----------------------------------- 212
I +IE Q+ K I Y P
Sbjct: 303 IAQTVIEHKQQMSK--AIYYNPANFAQPTIPLVNSSARRFQHRMMGDFRGGRMGRQFGPQ 360
Query: 213 -NAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLG---------IEGIGSTS 262
GP++ Q ++G+ + Q A + P G + +G + G
Sbjct: 361 PGFGPMMGMPSQMMGMYGQMS--PQGNANGQSPESGDGQSNMGRIPGGKPPQMGGYFPPQ 418
Query: 263 LTPAALAALSGSRVKSGGKDTG-DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG--A 319
P A S ++ TG D + +I + G +IG+ G L +IRQ +G
Sbjct: 419 YAPQFNPAAVASNTRAETVTTGADGKLNQDIFVPQKHIGLIIGRGGRNLKDIRQQTGCYV 478
Query: 320 QINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+IN + +K+ + + A LIN IE +K
Sbjct: 479 KINDEVPGSTERKLTLMSNNMYGIQNALLLINNKIENEK 517
>gi|358398587|gb|EHK47938.1| hypothetical protein TRIATDRAFT_47313 [Trichoderma atroviride IMI
206040]
Length = 369
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 38/216 (17%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K DE+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 30 DGELAPKTDEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 85
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G D + AY + R+L +
Sbjct: 86 QGVHDRVLTITGGCDA----------------------ISRAYAIVARALLEGAPAVGMG 123
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++ P+ KL+I G++IG+ G KIK I+D SG + +MLP STER+V
Sbjct: 124 GIVQGNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDTSGVRMVAQKEMLPQSTERVVE 181
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
V G P+ I +AI++I L++ Q G V+ Y P
Sbjct: 182 VQGTPEGIQRAIWEISKCLVD-DWQRGTGTVL-YNP 215
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+ GS++ +IR+ SGA+I+I E+ ++MF I G
Sbjct: 281 ENGEEIQTQNISIPADMVGCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGT 340
Query: 340 QEAVSLAQYLINMCIELQKNNTTNTSDN 367
+A A +L+ +E +K + D
Sbjct: 341 AKANESALFLLYENLEAEKMRRSQMQDQ 368
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
IPA G +IG+GG KI DIR SGA + +A + ER+ T+ G A++
Sbjct: 293 IPADMVGCIIGRGGSKISDIRKTSGARISIAKAPHDETGERMFTIMGTAKANESALF 349
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
I +R L S V +IG GG + RLR + A +++ D P+RI+T+ S DN+
Sbjct: 25 IELRVLIPSKV----AGSIIGKGGFNISRLRTDYNATVTVPDCPGPERILTIISSNDNAL 80
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
E + ++++ + + + + E + +++++ +
Sbjct: 81 KVLGEV--------MGNLEDGGSRFKRGGAGGGQGNNDNQGGET----DVDVRMLVHQSQ 128
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G +IGKGG K+K++R+ +G+ +++ + PMST+R+V + G P+T S + ++ +L
Sbjct: 129 AGCIIGKGGLKVKELREKTGSRIKIYTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKT 188
Query: 195 CTLQVVKGAVIPYEPKTMN 213
VKGA PY+P +
Sbjct: 189 AP---VKGAEDPYDPNNFD 204
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 262 SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
S+ P A+ A +G G T++ + D+AG +IGKAG+R+ IRQ SGA I
Sbjct: 329 SMPPPAMGAGAGKPAAFNG--------STQVTIPKDLAGAIIGKAGARIRRIRQDSGAGI 380
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I TE S +++ I G + +AQYL+ C++ QK
Sbjct: 381 TIGEPTEGSDERIITINGTDSQIQMAQYLLQQCVQAQK 418
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
+T + +R L H S + C+IG GG V+ LR+++G++I I CP DR+V ++G
Sbjct: 115 ETDVDVRMLVHQS----QAGCIIGKGGLKVKELREKTGSRIKIYTSCCPMSTDRVVQITG 170
Query: 69 SVDNSS 74
+ S
Sbjct: 171 KPNTCS 176
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGK G +I+ IR SGA + + + S ERI+T++G I A Y
Sbjct: 350 QVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIG-EPTEGSDERIITINGTDSQIQMAQY 408
Query: 187 --QICL 190
Q C+
Sbjct: 409 LLQQCV 414
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 99/199 (49%), Gaps = 19/199 (9%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
I +R L S V +IG GG + RLR + A +++ D P+RI+T+ S DN+
Sbjct: 23 IELRVLIPSKV----AGSIIGKGGFNISRLRTDYNATVTVPDCPGPERILTIISSNDNAL 78
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
E + ++++ + + + + E + +++++ +
Sbjct: 79 KVLGEV--------MGNLEDGGSRFKRGGAGGGQGNNDNQGGET----DVDVRMLVHQSQ 126
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G +IGKGG K+K++R+ +G+ +++ + PMST+R+V + G P+T S + ++ +L
Sbjct: 127 AGCIIGKGGLKVKELREKTGSRIKIYTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKT 186
Query: 195 CTLQVVKGAVIPYEPKTMN 213
VKGA PY+P +
Sbjct: 187 AP---VKGAEDPYDPNNFD 202
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 262 SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
S+ P A+ A +G G T++ + D+AG +IGKAG+R+ IRQ SGA I
Sbjct: 327 SMPPPAMGAGAGKPAAFNG--------STQVTIPKDLAGAIIGKAGARIRRIRQDSGAGI 378
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I TE S +++ I G + +AQYL+ C++ QK
Sbjct: 379 TIGEPTEGSDERIITINGTDSQIQMAQYLLQQCVQAQK 416
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 7/66 (10%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
+T + +R L H S + C+IG GG V+ LR+++G++I I CP DR+V ++G
Sbjct: 113 ETDVDVRMLVHQS----QAGCIIGKGGLKVKELREKTGSRIKIYTSCCPMSTDRVVQITG 168
Query: 69 SVDNSS 74
+ S
Sbjct: 169 KPNTCS 174
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGK G +I+ IR SGA + + + S ERI+T++G I A Y
Sbjct: 348 QVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIG-EPTEGSDERIITINGTDSQIQMAQY 406
Query: 187 --QICL 190
Q C+
Sbjct: 407 LLQQCV 412
>gi|320034805|gb|EFW16748.1| KH domain RNA-binding protein [Coccidioides posadasii str.
Silveira]
Length = 345
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 35/202 (17%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + V+ E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 46 SMLTLRAI----VSTKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 101
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
++ AY + +SL + ++N P+ +
Sbjct: 102 QGTAK----------------------AYGMVAKSLLEGAPQMGMGGIIQNNGTHPV--R 137
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +A+++
Sbjct: 138 LLISHNQMGTIIGRNGLKIKCIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAVWE 197
Query: 188 ICLVLIECTLQVVKGAVIPYEP 209
I LI+ Q G V+ Y P
Sbjct: 198 IGKCLID-DWQRGTGTVL-YNP 217
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Query: 80 TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLI 139
TG PGH + + ++N + S + I E + L L+ ++ G +I
Sbjct: 10 TGAPGHE------EGLSESFNRVNLSEQGEDITPKTEEEYAQSMLTLRAIVSTKEAGVII 63
Query: 140 GKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQV 199
GK G + D+RD +G V S ++ +R++TV G ++A + L+E Q+
Sbjct: 64 GKAGKNVADLRDETGVKAGV-SKVVQGVHDRVLTVTGPLQGTAKAYGMVAKSLLEGAPQM 122
Query: 200 VKGAVI 205
G +I
Sbjct: 123 GMGGII 128
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 159/381 (41%), Gaps = 53/381 (13%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPD 61
N KI+ D L+ R L ++ + +IG G ++ +R + AKI + D C
Sbjct: 27 NNGEKINRDELVIYRIL----CPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQ 82
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRS-LEDYHINRNRMENCS 120
R++T+ SV ++ + D + Y+ + S E+ I+R+ + C
Sbjct: 83 RVITIYCSVKEKKEEEIDFMKSETEPLCCAQDALLKVYDAIVASDEENIKIDRDDKKECL 142
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-------MLPMSTERIVT 173
L++P++ SLIGK G IK IR + A+V+V S + M + IV
Sbjct: 143 -------LLVPSSQSFSLIGKAGENIKRIRSTTRASVKVVSKDVSDPSHVCAMDYDNIVV 195
Query: 174 VHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA-GPVILS---GGQAYTLHG 229
+ G P+++ +A++ + +L ++ IP + + +I+S Y G
Sbjct: 196 ISGEPESVKKALFAVSAIL----YKINPREHIPLDSTGQDVPASIIVSSDLSNSVYPQTG 251
Query: 230 EYAVP---VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GGKDTGD 285
Y+ +Q+ AG P L+V +G T+ P + A S GG
Sbjct: 252 FYSNQDHILQQRAG--VPSYFNALSVSNFQGYAETAANPMPVFASSLPVTHGFGGSSRSK 309
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH---------------TGTESH 330
+ V + +I VIGK GS + IR+ SG+ I ++ T TES
Sbjct: 310 ELVLKVLCPLSNITR-VIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATESP 368
Query: 331 KKMFHIQGCQEAVSLAQYLIN 351
M + EAV L Q IN
Sbjct: 369 DDMKSM--AVEAVLLLQEYIN 387
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 134/343 (39%), Gaps = 74/343 (21%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDR----IVTVSGSVDNSSTSSVET 80
++ I+ +IG GG ++R+R+ SG+ I + D C D IVT + S D+ + +VE
Sbjct: 319 LSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA 378
Query: 81 GYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
L L++Y IN E ++++L + + G +IG
Sbjct: 379 -----VLL-----------------LQEY-INDEDAEK-----VKMQLFVSSKDIGCVIG 410
Query: 141 KGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
K G I +IR + AN+ ++ + +V V G ++ AI QI L L E L
Sbjct: 411 KSGSVINEIRKRTNANICISKG----KKDDLVEVAGEISSVRNAIIQIVLRLREDVLGDR 466
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGS 260
+P + SG AG P ++ + G G GS
Sbjct: 467 DSVAASRKPPARTDNYSLFSGSSN--------------AGYTLPSFMSSASSSGFHGYGS 512
Query: 261 T--------SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
S++P + L S EI++ + V+GK G L
Sbjct: 513 FPAGDNVFGSVSPYSFGRLPSSSA-------------LEILIPANAMSKVMGKGGGNLEN 559
Query: 313 IRQISGAQINI-HTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
IR+ISGA I I + T + + G E + A+ L+ I
Sbjct: 560 IRRISGAMIEISDSKTSQGDHIALLSGTLEQMRCAENLVQAFI 602
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 147/348 (42%), Gaps = 60/348 (17%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTSSVETGYPGH 85
++I +IG G ++ +RKESGA++ + D + I+TVS +
Sbjct: 321 DKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSST---------------- 364
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ D+V +A ++E + + ++ + + + L+L++P G LIGKGG
Sbjct: 365 ----EATDDVKSA------AVEAVLLLQAKINDETEDRMHLRLLVPGNVIGCLIGKGGSI 414
Query: 146 IKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKG 202
I D+R+ S A + ++ P S++ +V V G D + A+ QI L L E L+ G
Sbjct: 415 INDMRNKSKAIIHISKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLREDVLKDSVG 474
Query: 203 ----------AVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
V EP + ++ P+ A + + P++ H G
Sbjct: 475 RQNSGKDGKLTVATTEPVSSSSFPM-----PALLPYSQQITPLR--------HDQRGEVE 521
Query: 253 LGIEGIGSTSL----TP-AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
G +SL +P A+ G R K G + E+ + V+GK G
Sbjct: 522 RGSNVFPRSSLYHGYSPREAVDDGFGVRSSYTSKPYGRRVPDMEMFIPSSGLSKVMGKHG 581
Query: 308 SRLLEIRQISGAQINI-HTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
+ L IR+ISGA I I + + H + HI G E A+ LI I
Sbjct: 582 TNLDNIRKISGADIEILESKSSRHDHVAHIFGTPEQWQSAENLIKAFI 629
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 135/316 (42%), Gaps = 39/316 (12%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
I +IG GG ++ +R+++ AK+ + D R++ V V + + +
Sbjct: 49 IGSVIGKGGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVMLSDI----NAD 104
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+ VC A N + + + D + + + S + +++PA+ S+IGK G IK
Sbjct: 105 DDDDREPVCAAQNALLK-VHDAIVGALAVTDDSDDK-EANILVPASQAASVIGKSGSVIK 162
Query: 148 DIRDLSGANVQVA----SDML---PMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
+R +S + ++V SD+ MS + V + G+ + +A++ + ++ +C +
Sbjct: 163 KLRSVSKSFIKVKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSK-- 220
Query: 201 KGAVIPYEPKTMNAGPVILSGGQ--AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGI 258
IP E P I+ + Y Y+V A HP L++LG
Sbjct: 221 --ENIPLETSIDELPPTIILPSELPVYPASSLYSV---SDASMPSGHP--SLSILGATSR 273
Query: 259 GS--TSLT---------PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
GS T P + + + K +G+ + +V D G VIGKAG
Sbjct: 274 GSHVPDFTVPIDTHGGLPIYQSMVPAVPTYNTPKCSGELLL--RVVCPGDKIGLVIGKAG 331
Query: 308 SRLLEIRQISGAQINI 323
+ IR+ SGA++++
Sbjct: 332 MTIKNIRKESGARVDV 347
>gi|365990261|ref|XP_003671960.1| hypothetical protein NDAI_0I01480 [Naumovozyma dairenensis CBS 421]
gi|343770734|emb|CCD26717.1| hypothetical protein NDAI_0I01480 [Naumovozyma dairenensis CBS 421]
Length = 459
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 165/383 (43%), Gaps = 49/383 (12%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
L+ +R L V + S ++G G + R++ E+ +I++++ P+R++ + GS +
Sbjct: 81 LVFLRLL----CTVKQASLIVGHRGETISRIKNETSTRINVSENIRGVPERVIYIKGSCE 136
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
N++ + G + T+ + TA N D + +++ P + + +
Sbjct: 137 NAAKAC---GQIARVISTTNDKSTTTASN----DGTDNEPSSVVVDDDKPSKVLTTINLL 189
Query: 132 ATH--CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
+H G +IGK G ++K+I DLS A + + D L S +RI+TV G PD I A + +
Sbjct: 190 LSHHLIGYIIGKHGLRLKEIEDLSAAKLSASRDQLVPSNDRILTVTGVPDAIHIATFYMG 249
Query: 190 LVLIECTLQVVKGAVIPYEPKTM-----NAGPVILSGGQA---YTLH--GEYAVPVQEVA 239
L+ C K I Y+P M N+ GGQ Y H +Y + +
Sbjct: 250 QTLLNCKEVSKKKRGIFYQPTPMYSALPNSSYNSSFGGQPQRFYQYHSNNKYNGYRTKRS 309
Query: 240 GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG--------KDTGDDF---- 287
G++ P+ ++V I +TP + + S + + F
Sbjct: 310 GRQ---PVMMMSVESPIPIQQPLMTPVMYTTANAANATSFTPSFSIPHVRTVDNSFPNMS 366
Query: 288 --------VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
V+ EI + ++ G +IGK G + I++ +G I I E + ++ I+G
Sbjct: 367 VPSSHLPSVKREIYIDENYVGNIIGKEGKHINSIKETTGCSIIIDDSVEGATERKLTIRG 426
Query: 339 CQEAVSLAQYLINMCIELQKNNT 361
A LI+ IEL + +T
Sbjct: 427 TGMGSQAAIMLISNKIELDRIST 449
>gi|392571215|gb|EIW64387.1| cytoplasmic protein [Trametes versicolor FP-101664 SS1]
Length = 325
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 88/182 (48%), Gaps = 28/182 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+T+R L V+ + +IG G V LR ++G K ++ +R++TV+G+V+
Sbjct: 28 LTLRAL----VSTKDAGVIIGKAGKNVAELRDQTGVKAGVSKVIPGVHERVLTVTGTVEG 83
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V AY+ + L + M S ++L+I
Sbjct: 84 ----------------------VAKAYSLIVSQLVSASPSSPTMSPTSSPTTAIRLLISH 121
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
GS+IG+ G KIK I+D SGA + + DMLP STERIV V G+ ++I +AI +I L
Sbjct: 122 NLMGSVIGRNGLKIKAIQDSSGARMVASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCL 181
Query: 193 IE 194
+E
Sbjct: 182 LE 183
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 115/283 (40%), Gaps = 49/283 (17%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+ ++ G +IGK G + ++RD +G V S ++P ER++TV G + +++
Sbjct: 28 LTLRALVSTKDAGVIIGKAGKNVAELRDQTGVKAGV-SKVIPGVHERVLTVTGTVEGVAK 86
Query: 184 AIYQICLVLIECTLQV--------------------VKGAVIPYEPKTMNA-----GPVI 218
A I L+ + + G+VI + A G +
Sbjct: 87 AYSLIVSQLVSASPSSPTMSPTSSPTTAIRLLISHNLMGSVIGRNGLKIKAIQDSSGARM 146
Query: 219 LSGGQAYTLHGEYAVPVQ---EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
++ E V VQ E G+ L G+G+ P A SG R
Sbjct: 147 VASKDMLPQSTERIVEVQGSSESIGRAIEEIGRCLLEDWERGVGTVLFHPGAGEERSGRR 206
Query: 276 VKSGGKDTGDDFVET------------------EIVLTDDIAGCVIGKAGSRLLEIRQIS 317
+ + D T I + D+ GC+IG+ G+++ EIR++S
Sbjct: 207 THPTNRRSNGDVRRTSPSPSSPSSSPPTNLRTQNISIPSDMVGCIIGRNGTKITEIRRLS 266
Query: 318 GAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
G++I+I E+ ++MF I G EA A +L+ +E +K
Sbjct: 267 GSKISIAKEPHDETGERMFTIVGTPEANEKALFLLYNQLESEK 309
>gi|326470883|gb|EGD94892.1| KH domain RNA-binding protein [Trichophyton tonsurans CBS 112818]
gi|326478447|gb|EGE02457.1| KH domain RNA-binding protein [Trichophyton equinum CBS 127.97]
Length = 367
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 49/195 (25%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 46 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 101
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-------- 122
+S AY+ + +SL + +PQ
Sbjct: 102 QGTSK----------------------AYSIVAKSLLE----------GAPQMGMGGVVQ 129
Query: 123 ---PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 130 NNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 189
Query: 180 TISQAIYQICLVLIE 194
I +AI++I LI+
Sbjct: 190 GIEKAIWEIGKCLID 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 280 EDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGS 339
Query: 340 QEAVSLAQYLINMCIELQK 358
+A A YL+ +E +K
Sbjct: 340 AQANEKALYLLYENLEAEK 358
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IG+GG KI +IR SGA + +A + ER+ T+ G+ +A+Y
Sbjct: 290 ISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALY 348
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+ ++ + G +IGK G + D+RD +G V S ++ +R++TV G S+
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVQGVHDRVLTVTGPLQGTSK 106
Query: 184 AIYQICLVLIECTLQVVKGAVI 205
A + L+E Q+ G V+
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVV 128
>gi|302654659|ref|XP_003019130.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
gi|291182834|gb|EFE38485.1| hypothetical protein TRV_06814 [Trichophyton verrucosum HKI 0517]
Length = 379
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 49/195 (25%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 58 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 113
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-------- 122
+S AY+ + +SL + +PQ
Sbjct: 114 QGTSK----------------------AYSIVAKSLLE----------GAPQMGMGGVVQ 141
Query: 123 ---PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 142 NNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 201
Query: 180 TISQAIYQICLVLIE 194
I +AI++I LI+
Sbjct: 202 GIEKAIWEIGKCLID 216
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 292 EDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGS 351
Query: 340 QEAVSLAQYLINMCIELQK 358
+A A YL+ +E +K
Sbjct: 352 AQANEKALYLLYENLEAEK 370
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IG+GG KI +IR SGA + +A + ER+ T+ G+ +A+Y
Sbjct: 302 ISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALY 360
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+ ++ + G +IGK G + D+RD +G V S ++ +R++TV G S+
Sbjct: 60 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVQGVHDRVLTVTGPLQGTSK 118
Query: 184 AIYQICLVLIECTLQVVKGAVI 205
A + L+E Q+ G V+
Sbjct: 119 AYSIVAKSLLEGAPQMGMGGVV 140
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 38/345 (11%)
Query: 6 DGKID--EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPD 61
+ KID +D ++ R L S V + +IG G ++ +R+E+ A+I + D C +
Sbjct: 33 EKKIDNKDDLVVVYRILCPSGV----MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSE 88
Query: 62 RIVTVSGSV-DNSSTSSVETGYPGHTLWVTSVDN-VCTAYNFMCRSL----EDYHINRNR 115
R++T+ SV + +E +++ + S + ++ + SL E+ I+R+
Sbjct: 89 RVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDD 148
Query: 116 MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDML-------PMST 168
C +L++P++ C +IGK G IK+IR + ANV+V S + M
Sbjct: 149 FREC-------RLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDF 201
Query: 169 ERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYT 226
+ IV + G +++ +A++ + ++ +V IP + + + A +I S Y
Sbjct: 202 DNIVMISGETESVKKALFAVSAIM----YKVSPREQIPLDTTVQEVPASIIIPSDLSIYP 257
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-GKDTGD 285
G Y P Q+ + + + + L +G G + P + + S V G G +
Sbjct: 258 QAGLY--PSQDSIFQHGANVSSFIGTLP-QGYGENAANPVPVFSASALPVVHGFGGSSRS 314
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH 330
+ + +++ + G VIGK G + IRQ SG+ I ++ +H
Sbjct: 315 EKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNH 359
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK------KMFH 335
D +D V+ +++++ + GC+IGK+GS + EIR+ + A I+I G + K ++
Sbjct: 393 DEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVE 452
Query: 336 IQGCQEAV--SLAQYLINMCIELQKNNTTNTSDNP 368
I G V +L Q ++ + ++ ++ T + + P
Sbjct: 453 ISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQP 487
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 159/345 (46%), Gaps = 38/345 (11%)
Query: 6 DGKID--EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPD 61
+ KID +D ++ R L S V + +IG G ++ +R+E+ A+I + D C +
Sbjct: 33 EKKIDNKDDLVVVYRILCPSGV----MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSE 88
Query: 62 RIVTVSGSV-DNSSTSSVETGYPGHTLWVTSVDN-VCTAYNFMCRSL----EDYHINRNR 115
R++T+ SV + +E +++ + S + ++ + SL E+ I+R+
Sbjct: 89 RVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDD 148
Query: 116 MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDML-------PMST 168
C +L++P++ C +IGK G IK+IR + ANV+V S + M
Sbjct: 149 FREC-------RLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDF 201
Query: 169 ERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYT 226
+ IV + G +++ +A++ + ++ +V IP + + + A +I S Y
Sbjct: 202 DNIVMISGETESVKKALFAVSAIM----YKVSPREQIPLDTTVQEVPASIIIPSDLSIYP 257
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-GKDTGD 285
G Y P Q+ + + + + L +G G + P + + S V G G +
Sbjct: 258 QAGLY--PSQDSIFQHGANVSSFIGTLP-QGYGENAANPVPVFSASALPVVHGFGGSSRS 314
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH 330
+ + +++ + G VIGK G + IRQ SG+ I ++ +H
Sbjct: 315 EKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNH 359
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 52/97 (53%), Gaps = 12/97 (12%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK------KMFH 335
D +D V+ +++++ + GC+IGK+GS + EIR+ + A I+I G + K ++
Sbjct: 393 DEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVE 452
Query: 336 IQGCQEAVSLAQYLINMCIELQ----KNNTTNTSDNP 368
I G E ++ LI + + L+ ++ T + + P
Sbjct: 453 ISG--EVSNVRDALIQIVLRLRDDVLRDRETGSRNQP 487
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 140/353 (39%), Gaps = 63/353 (17%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGAC---PDRIVTVSGSVDNSSTSSVETGYPG 84
++I +IG GG ++ +R+ SG+ I + D D ++TV+ + S+
Sbjct: 326 SKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM------ 379
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
++E + + ++ + ++++L++ + G +IGK G
Sbjct: 380 --------------------AVEAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGS 419
Query: 145 KIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
I +IR + A++ ++ + P + +V + G + A+ QI L L + L+
Sbjct: 420 IISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLR-- 477
Query: 201 KGAVIPYEPKTMNAGPV-----------ILSGGQAYTLHGEYAVP-VQEVAGKKQPHPLA 248
E + N P + G A +VP V V ++P +
Sbjct: 478 -----DRETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGS 532
Query: 249 GLAVL----GIEGIGSTSL--TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
+++L GI G GS + T + S + G + E+ + + G V
Sbjct: 533 SMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQS----TTMEVRIPANAVGKV 588
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCI 354
+G+ G L IR+ISGA I I SH ++ I G E A+ L I
Sbjct: 589 MGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFI 641
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 49/195 (25%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + S E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 46 SMLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 101
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-------- 122
+S AY+ + +SL + +PQ
Sbjct: 102 QGTSK----------------------AYSIVAKSLLE----------GAPQMGMGGVVQ 129
Query: 123 ---PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
++L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 130 NNGTHSVRLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 189
Query: 180 TISQAIYQICLVLIE 194
I +AI++I LI+
Sbjct: 190 GIEKAIWEIGKCLID 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 280 EDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGS 339
Query: 340 QEAVSLAQYLINMCIELQK 358
+A A YL+ +E +K
Sbjct: 340 AQANEKALYLLYENLEAEK 358
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IG+GG KI +IR SGA + +A + ER+ T+ G+ +A+Y
Sbjct: 290 ISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALY 348
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+ ++ + G +IGK G + D+RD +G V S ++ +R++TV G S+
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVQGVHDRVLTVTGPLQGTSK 106
Query: 184 AIYQICLVLIECTLQVVKGAVI 205
A + L+E Q+ G V+
Sbjct: 107 AYSIVAKSLLEGAPQMGMGGVV 128
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPG 84
V E + ++G G + +R+++ +I +++ P+R+++V GS ++
Sbjct: 122 VKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAED------------ 169
Query: 85 HTLWVTSVDNVCTAYNFMCRS-LEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
V A+ + R+ LE+ + + + + LKL++P G +IGK G
Sbjct: 170 ----------VARAFGLITRAILEE---PEDEPASITSKQYNLKLLVPHPMVGYIIGKSG 216
Query: 144 CKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
K ++I + S A ++ A LP ST+R+++V G D I A+Y IC V++ + K
Sbjct: 217 SKFREIEENSAAKLKAAEQALPYSTDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHK 276
Query: 204 VIPYEPKTM 212
+I Y P
Sbjct: 277 IIYYNPSNF 285
>gi|354542956|emb|CCE39674.1| hypothetical protein CPAR2_600900 [Candida parapsilosis]
Length = 375
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 96/214 (44%), Gaps = 32/214 (14%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRI 63
D + D LI R L V+ E CLIG G ++ +R+E+ K I+ +RI
Sbjct: 100 DDNTNADALINYRVL----VSAKEAGCLIGQNGKVIDSIREETNTKAGISRLIAGTHERI 155
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+TVSG +D+ + + Y L +S++ YN+ ++ S P
Sbjct: 156 LTVSGKLDDCAKA---LSYFAQALLGSSIET----YNYFP------------LKQLSSTP 196
Query: 124 ------LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
L+L+IP + G+LIG G +I+ I+ G ++ + LP S ER+V + G
Sbjct: 197 CVEHETTILRLLIPNSQMGTLIGAKGARIQQIQHNFGISMIASKSFLPGSNERLVELQGT 256
Query: 178 PDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
D + A+ I LIE V G Y PK+
Sbjct: 257 VDDLYDALRIISRCLIEDFSSSV-GTTTYYVPKS 289
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 118/278 (42%), Gaps = 62/278 (22%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++++ A G LIG+ G I IR+ + + S ++ + ERI+TV G D ++
Sbjct: 109 INYRVLVSAKEAGCLIGQNGKVIDSIREETNTKAGI-SRLIAGTHERILTVSGKLDDCAK 167
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEP-KTMNAGP----------VILSGGQAYTLHGEYA 232
A+ L+ +++ Y P K +++ P +++ Q TL G
Sbjct: 168 ALSYFAQALLGSSIETYN-----YFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGAKG 222
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAA---LAALSGS--------RVKSGGK 281
+Q++ GI I S S P + L L G+ R+ S +
Sbjct: 223 ARIQQIQHN-----------FGISMIASKSFLPGSNERLVELQGTVDDLYDALRIIS--R 269
Query: 282 DTGDDFVET--------------------EIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
+DF + I +D+ G +IGK GSR+ +R++SGA I
Sbjct: 270 CLIEDFSSSVGTTTYYVPKSHQSTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMI 329
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I E S +++F I G Q+AV A+ L+ +E ++
Sbjct: 330 GIGEAVEGSDERVFTITGTQQAVEKAKSLLYHNLEREE 367
>gi|363749247|ref|XP_003644841.1| hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888474|gb|AET38024.1| Hypothetical protein Ecym_2278 [Eremothecium cymbalariae
DBVPG#7215]
Length = 398
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 133/327 (40%), Gaps = 49/327 (14%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDN 72
+ M CL V S ++G G + R+++++ +I+++D P+R+V + GS ++
Sbjct: 50 MRMLCL------VKHASMVVGAKGERISRIKEDTKTRINVSDNIKNVPERVVYLRGSCED 103
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R++ D +R N PL + L+IP
Sbjct: 104 ----------------------VAKAFGKISRAIND---EDDRESNERSLPLTVNLLIPH 138
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G +IGK G ++++I DLS A + LPMS +R++ + G D I A Y + +
Sbjct: 139 HLMGYVIGKQGSRLREIEDLSAARLVAGPQQLPMSNDRVLCITGVADAIHIATYYVGQTI 198
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ-------PH 245
+ C + I Y+P +++ V G P ++ K P
Sbjct: 199 LTCEPKYKNKKTIFYQPNPLHSVLVNNYGIAIQHQQHHQYHPGDKIKRSKSRMSPVLPPT 258
Query: 246 PLAGL--------AVLGIEGIGSTSLTPAALAALSGSR-VKSGGKDTGDDFVETEIVLTD 296
P + V+ I GST + L R V+ V EI + D
Sbjct: 259 PNEMMLQPSHNNGGVIPIGPSGSTISNSTSAVVLPHVRIVEIMNPQPQVTPVVQEIFIED 318
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINI 323
+ G VIGK G + +I+ +G I I
Sbjct: 319 SMVGNVIGKGGKSIAQIKGSTGCSIQI 345
>gi|195592300|ref|XP_002085873.1| GD15007 [Drosophila simulans]
gi|194197882|gb|EDX11458.1| GD15007 [Drosophila simulans]
Length = 180
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AALAAL+GS++++ + E+ +++D+ GC+IGK G+++ EIRQISGA I I
Sbjct: 62 AALAALAGSQLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 121
Query: 326 GTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
E + I G ++V+LAQYLINM I ++
Sbjct: 122 CEEREGGNTDRTITISGNPDSVALAQYLINMRISME 157
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
Q Q ++ + G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD
Sbjct: 82 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 141
Query: 180 TISQAIYQICL 190
+++ A Y I +
Sbjct: 142 SVALAQYLINM 152
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 170/402 (42%), Gaps = 88/402 (21%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSGSVDNSSTSSVETG---- 81
+I +IG GG IV++LR E+ AKI I T C +R+VT+ G D T++VE G
Sbjct: 51 RKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDE--TNAVEGGGNYV 108
Query: 82 YPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
P D V ED+H +++ + KL++P+ G +IGK
Sbjct: 109 SPAQDALFKVHDRVVA---------EDFHGDQDDDGGQQ---VTAKLLVPSDQIGCVIGK 156
Query: 142 GGCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIEC-- 195
GG +++IR +GA +++ D LPM S++ +V + G+ + +A+YQI L +
Sbjct: 157 GGSIVQNIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPS 216
Query: 196 -TLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLG 254
+ ++ AV P G +I G A P+ G+A L
Sbjct: 217 RSQHLLTSAVSGVYPA---GGSLIGPGAGA---------------------PIVGIAPL- 251
Query: 255 IEGIGSTSLTPAALAALSGSRVKSGGKD--TGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
+GS + S +D + +F + T +I G VIGK G + +
Sbjct: 252 ---VGSYGGYKGDTGDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGG-VIGKGGMIINQ 307
Query: 313 IRQISGAQINIHTGTESHKKMFHIQG--CQEAVSLAQYL-------INMCIELQKNNTTN 363
IRQ SGA I + + T I+G C A+S ++ I + LQ +
Sbjct: 308 IRQDSGATIKVDSST--------IEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCS-- 357
Query: 364 TSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVTLGG 405
E + D+ I +F T + PT G ++ GG
Sbjct: 358 -----EKVERDSGIISFTTR------LLVPTTRIGCLIGKGG 388
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWV 89
I +IG GG I+ ++R++SGA I + T+ G + S+ E
Sbjct: 294 IGGVIGKGGMIINQIRQDSGATIKVDSS-------TIEGDECLIAISTKEF------FEE 340
Query: 90 TSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDI 149
T + A R E + + +L++P T G LIGKGG I D+
Sbjct: 341 TFSPTIEAAVRLQPRCSEKVERDSGIIS------FTTRLLVPTTRIGCLIGKGGSIITDM 394
Query: 150 RDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA-- 203
R L+ AN+++ S + LP + +V + G+ D A+ + L + L +GA
Sbjct: 395 RRLTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHV-LTRLRANLFDREGALS 453
Query: 204 ----VIPYEPKTMNAGPVILSGGQAYTLHGE 230
V+PY P + + + G+ HG
Sbjct: 454 AFLPVLPYLPVSADGSDGLNYDGRDGKRHGR 484
>gi|302406408|ref|XP_003001040.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
gi|261360298|gb|EEY22726.1| Poly(rC)-binding protein [Verticillium albo-atrum VaMs.102]
Length = 359
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 2 DGNGDGKIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD-- 56
DG K +E+ +T+R + S E +IG GG V LR E+G K ++
Sbjct: 31 DGEPAPKTEEEYAQAQLTLRAIVSS----KEAGVIIGKGGKNVADLRDETGVKAGVSKVV 86
Query: 57 GACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR- 115
DR++T++G + + AY + ++L + +
Sbjct: 87 QGVHDRVLTITGGCEA----------------------ISRAYAIVAQALLEGAPSLGMG 124
Query: 116 --MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT 173
++ P+ KL+I G++IG+ G KIK I+D+SG + +MLP STERIV
Sbjct: 125 GVPQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHIQDVSGVRMVAQKEMLPQSTERIVE 182
Query: 174 VHGNPDTISQAIYQI--CLV 191
V G PD I AI++I CLV
Sbjct: 183 VQGTPDGIRAAIWEISKCLV 202
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 59/117 (50%), Gaps = 7/117 (5%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+ ++ + G +IGKGG + D+RD +G V S ++ +R++T+ G + IS+
Sbjct: 47 LTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGV-SKVVQGVHDRVLTITGGCEAISR 105
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPV--ILSGGQAYTLHGEYAVPVQEV 238
A + L+E + G V P++ P+ ++S Q T+ G + ++ +
Sbjct: 106 AYAIVAQALLEGAPSLGMGGV----PQSNGTHPIKLLISHNQMGTIIGRQGLKIKHI 158
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 65/372 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+ M CL + S ++G G V R++ E+ +I+++D +R++ V G +
Sbjct: 69 LRMLCLMKQA------SKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKCEE 122
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + R++ + + N PL + L+IP
Sbjct: 123 ----------------------VARAFGKIVRAINN---ESDDDSNERSLPLVVNLLIPH 157
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G +IG+ G ++ +I DLS A + + LPMS +RI+++ G D I A Y I +
Sbjct: 158 HFMGCIIGRQGSRLHEIEDLSAARLMASPQQLPMSNDRILSLTGVADAIHIATYYIGQTI 217
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHG-----------EYAVPVQEVAGK 241
+E ++ + Y P M++ V+++ Q Y ++ P QE
Sbjct: 218 LENESKLKNKKSVFYHPGPMHS--VLVNNYQMYMIYSGGAPTNPQDITPMVAPHQE---H 272
Query: 242 KQPHPLAGLAV-------LGIEGIG-STSLTPAALAALSGSRVK-----SGGKDTGDDFV 288
Q HP+ + + IG SL P S VK + +
Sbjct: 273 HQYHPMDKKTMNRRTKPPVSKYPIGPQQSLQPYTDMVDSCKHVKIISQLQQSPISPHLVL 332
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE--SHKKMFHIQGCQEAVSLA 346
E+ + + G VIGK G + +I+Q +G I I+ E +K+ I G A A
Sbjct: 333 PQEVFIDNKFVGNVIGKGGKNIQQIKQSTGCMIKINDPVEGLDERKLVLI-GTPLATQTA 391
Query: 347 QYLINMCIELQK 358
+IN I++ K
Sbjct: 392 IMMINNRIDMDK 403
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 92/346 (26%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 46 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 84
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 144
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 145 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE-- 202
Query: 197 LQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE 256
+P++ + L+ YA VAG V
Sbjct: 203 -----------DPQSSSC------------LNISYA----NVAG----------PVANSN 225
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
GS +PA LAA S + EI + +++ G ++GK G L+E +++
Sbjct: 226 PTGSPYASPADLAAESAKEL-------------VEIAVPENLVGAILGKGGKTLVEYQEL 272
Query: 317 SGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+GA+I I E + + I G A AQYLI+ + ++
Sbjct: 273 TGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQ 318
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 93
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 111/239 (46%), Gaps = 43/239 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D + +R L S +IG GG ++ LR + A +S+ D + P+RI++++ ++
Sbjct: 45 DQCVELRLLLQS----KNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGPERILSINADIE 100
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ ++ + + +LE+Y + + +C +L++++
Sbjct: 101 -------------------TIGDILSK---IVPTLEEYQHYKGKDFDC-----ELRMLVH 133
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++R+ + +++ + P ST+R+V + G PD + + I I +
Sbjct: 134 QSQAGSIIGVKGVKIKELRESTQTTIKLFQECCPHSTDRVVLLGGKPDRVVECIKIIMGL 193
Query: 192 LIECTLQVVKGAVIPYEP----KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
L E VKG PY+P +T + G + + G +P G+ PHP
Sbjct: 194 LSESP---VKGRAQPYDPNFYDETYDYGGFTM----MFDERGRRGMPFGP-RGRGGPHP 244
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 344 DLGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 403
Query: 341 EAVSLAQYLI-NMC 353
+ + AQYL+ N C
Sbjct: 404 DQIQNAQYLLQNSC 417
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 353 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 411
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 107 EDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM 166
E+ R+R + Q ++L+L++ + + G++IGKGG IK +R A+V V P
Sbjct: 34 EEQAFKRSRNND---QCVELRLLLQSKNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGP- 89
Query: 167 STERIVTVHGNPDTISQAIYQICLVLIE 194
ERI++++ + +TI + +I L E
Sbjct: 90 --ERILSINADIETIGDILSKIVPTLEE 115
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 141/340 (41%), Gaps = 47/340 (13%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDR---IVTVSGS--VDNSSTSSVETGYP 83
+I +IG GG ++ +R+ESGA+I + D A DR I+T++ + +D+ +++VE
Sbjct: 320 KIGLVIGRGGATIKNIRQESGARIDV-DDAKNDREESIITITSTEAIDDVKSAAVE---- 374
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
A + + DY +R + L+L++P G LIG+GG
Sbjct: 375 --------------AVLLLQAKINDYEDDR----------MNLRLLVPNKVIGCLIGRGG 410
Query: 144 CKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL-QV 199
+ D+R + AN+ ++ P S++ +V V G D + A+ QI L L E L +
Sbjct: 411 SIVNDMRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREDVLKES 470
Query: 200 VKGAVIPYEPKTMNAGPVILSGGQ----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGI 255
V+ + K A L G A H P+ + L
Sbjct: 471 VESQNSDRDGKLTVATSDSLYGSSLSLPALLPHNPQIAPLSYDRRGESERALEVFPRTSS 530
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
G S +T L K+ + D E+ + V+GK G+ L IR+
Sbjct: 531 YGYSSMQVTDDGYGGLPSYTSKAYEEHLPRD----EMTIPASGLSKVMGKRGTNLDNIRK 586
Query: 316 ISGAQIN-IHTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
ISGA I I + + H + +I G E A+ LI I
Sbjct: 587 ISGAHIEIIESKSSRHDHIAYISGTSEQRQSAENLIKAFI 626
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 144/342 (42%), Gaps = 60/342 (17%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
+ D L+ R L S+ I +IG G ++ +R+++ AK+ + D R++ V
Sbjct: 36 NNDGLVLYRILCPDSL----IGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILV- 90
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDN---VCTAYNFMCR---SLEDYHINRNRMENCSP 121
Y H VD+ VC A + + R ++ D ++RNR ++
Sbjct: 91 ------------YCYVKHRDLDAEVDDNEPVCAAQDALLRVHNAIVDT-LHRNRRDSDKK 137
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-------ASDMLPMSTERIVTV 174
+ +++PA+ ++IGK G IK +R S A ++V A+ MS + V +
Sbjct: 138 NTEEANILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQI 197
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP--VILSGGQAYTLHGEYA 232
G + + +A++ + ++ + + IP E P +I S Y Y+
Sbjct: 198 TGGAEAVKKALFGVSTIIYKHPSK----ENIPLETSIPEPTPSIIIPSELPVYPASNFYS 253
Query: 233 VPVQEVAGKKQPHPLAGLAVLG-----------IEGIGSTSLTPAALAALSGSRVKSGGK 281
P + HP L++LG + G + P+ L + S K
Sbjct: 254 APDAAIPSV---HP--SLSILGSTHHVPELALPADDHGRLPIYPSILPVIP---TYSAPK 305
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+G+ +E ++ G VIG+ G+ + IRQ SGA+I++
Sbjct: 306 CSGE--LEFRVLCPSGKIGLVIGRGGATIKNIRQESGARIDV 345
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP------DRIV 64
ED + +R L + V I CLIG GG IV +RK++ A I I+ G P D +V
Sbjct: 387 EDDRMNLRLLVPNKV----IGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELV 442
Query: 65 TVSGSVD 71
VSG D
Sbjct: 443 EVSGEAD 449
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 147/358 (41%), Gaps = 97/358 (27%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ VSG +D+
Sbjct: 48 SVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDD-------------- 93
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
V A + L I + P+ ++++LV+P + CGS+IGKGG I
Sbjct: 94 --------VLKAVELIIAKLLS-EIPAEDGDEAEPR-MRVRLVVPNSACGSIIGKGGSII 143
Query: 147 KDIRDLSGANVQVASDMLPMS------TERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
K + S A ++++ P+ T+R+VTV G T+ + ++ I L+L + T
Sbjct: 144 KSFIEESHAGIKIS----PLDTKFFGLTDRLVTVTG---TLEEQMHAIDLILSKLTDD-- 194
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGS 260
P+ +TM+A P AG+ G +GI
Sbjct: 195 -----PHYSQTMHA-----------------------------PFSYAGVFFSGFDGIQY 220
Query: 261 TSLTP-AALAAL-------SGSRVKSGGKDTGDDFVET-EIVLTDDIAGCVIGKAGSRLL 311
+ P A AA +G+ VK + DD + I + D+ G V+G+ G ++
Sbjct: 221 ACVLPYVATAAYNSMNHGPNGAAVKF--QHNKDDITNSVTIGVADEHIGLVVGRGGRNIM 278
Query: 312 EIRQISGAQINIH------TGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
EI Q SGA++ I +GT K I G Q A+ A+ +I + T+
Sbjct: 279 EISQTSGARLKISDRGDFMSGTTDRK--ITITGSQRAIRAAEDMIMQKVSYASERETD 334
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
+P + ++ GS+IGKGG I D + SGA +Q++ + P +++RI+ V G D
Sbjct: 33 KPTYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGID 92
Query: 180 TISQAIYQICLVLI 193
+ +A+ I L+
Sbjct: 93 DVLKAVELIIAKLL 106
>gi|195161145|ref|XP_002021430.1| GL24805 [Drosophila persimilis]
gi|194118543|gb|EDW40586.1| GL24805 [Drosophila persimilis]
Length = 180
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
A LAAL+GS++++ E+ ++DD+ GC+IGK G+++ EIRQISGA I I
Sbjct: 62 AGLAALAGSQLRTANAANRAQQQRHEMTVSDDLIGCIIGKGGTKIAEIRQISGAMIRISN 121
Query: 326 GTESH----KKMFHIQGCQEAVSLAQYLINMCIELQ 357
E + I G ++V+LAQYLINM I ++
Sbjct: 122 CEEREGGNTDRTITISGNPDSVALAQYLINMRISME 157
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICL 190
G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD+++ A Y I +
Sbjct: 96 GCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALAQYLINM 152
>gi|387915114|gb|AFK11166.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 436
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 115/240 (47%), Gaps = 33/240 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D + +R L S +IG GG ++ LR + A +S+ D + P+RI++++
Sbjct: 45 DQCVELRLLLQS----KNAGAVIGKGGKNIKSLRTDYNASVSVPDSSGPERILSIN---- 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNV-CTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
+ +ET + + +++ V C ++ + S + Y + + +C +L++++
Sbjct: 97 ----ADIETIGDILSKIIPTLEEVRCVHFHHLQESYQHY---KGKDFDC-----ELRMLV 144
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
+ GS+IG G KIK++R+ + +++ + P ST+R+V + G PD + + I I
Sbjct: 145 HQSQAGSIIGVKGVKIKELRESTQTTIKLFQECCPHSTDRVVLLGGKPDRVVECIKIIMG 204
Query: 191 VLIECTLQVVKGAVIPYEP----KTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
+L E VKG PY+P +T + G + + G +P G+ PHP
Sbjct: 205 LLSESP---VKGRAQPYDPNFYDETYDYGGFTM----MFDERGRRGMPFGP-RGRGGPHP 256
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
+ T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q+ + A
Sbjct: 362 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNA 421
Query: 347 QYLI-NMC 353
QYL+ N C
Sbjct: 422 QYLLQNSC 429
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 365 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 423
>gi|254580581|ref|XP_002496276.1| ZYRO0C14674p [Zygosaccharomyces rouxii]
gi|238939167|emb|CAR27343.1| ZYRO0C14674p [Zygosaccharomyces rouxii]
Length = 434
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 158/388 (40%), Gaps = 60/388 (15%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--C 59
+G+ + + M CL V + S ++G G + R++ + +I++++
Sbjct: 73 EGDARDQRSRQAHLRMLCL------VKQASMIVGHKGETISRIKSMTNTRINVSENVRGV 126
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+R+V V GS +N V A+ + R+L D N ++
Sbjct: 127 PERVVYVRGSCEN----------------------VARAFGMIVRTLNDRGSGNND-KSF 163
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P + L+I G +IGK G ++K++ +LS A + + L MS +RI+T+ G D
Sbjct: 164 DDIPTTINLLISHHLMGVVIGKHGSRLKEVEELSAARLTAMPEQLMMSNDRILTIEGVAD 223
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQ-----AYTLHGEYAVP 234
+ A + + ++ C I Y+P + + V+L+GG ++ H +Y
Sbjct: 224 ALHIATFYVAQTILTCKDAFKFKKAIFYQPSPLYS--VLLNGGMSPMVYSHQQHHQYHPA 281
Query: 235 VQEVAGKKQPH-------PLAGLA----------VLGIEGIGSTSLTPAALAALSGSRVK 277
+ GK+ P P AG V+ +T+ + R+
Sbjct: 282 DKYRNGKRLPRSGVMFMVPAAGTTPQTVPQRPTPVMYTAANAATAPAFTPNFMIPNVRII 341
Query: 278 SGGKDT----GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKK 332
G T V+ EI + ++ G +IGK G + I++ +G I I + ++
Sbjct: 342 DGPVATPVAQTMAIVQQEIYIDENFVGNIIGKDGKHINSIKESTGCSIFIDDPVSGALER 401
Query: 333 MFHIQGCQEAVSLAQYLINMCIELQKNN 360
++G A LI+ IE+ K N
Sbjct: 402 KLTVRGTSMGSQAAIMLISNKIEIDKIN 429
>gi|426219907|ref|XP_004004159.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Ovis aries]
Length = 439
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 358 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 418 DQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 314 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 373
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|190347114|gb|EDK39328.2| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 142/363 (39%), Gaps = 86/363 (23%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVTVSGSVD 71
LI R L V+ E CLIG G ++ +R+E+ K IS +RI+TVSG++D
Sbjct: 59 LINYRVL----VSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQPGSHERILTVSGTLD 114
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP----QPLQLK 127
+++ + Y L + + T F + L + +P + L+
Sbjct: 115 DAARA---LSYFAQALCNANTETFSTYSYFPLKQL-----------SSTPCVEGETTILR 160
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+IP G+LIG G +I+ I+ ++ + LP S ER+V + G + + +
Sbjct: 161 LLIPNAQMGTLIGSKGVRIQQIQANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRV 220
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
I LIE +V + Y P+ GG G ++ P
Sbjct: 221 ISRCLIEDFSSIVTTSY--YIPR----------GGNTTKYRG---------TDRRSSSP- 258
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
GI +T P ++I G +IGK G
Sbjct: 259 ---------GISTTLYFP------------------------------NEIVGALIGKNG 279
Query: 308 SRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
SR+ +R++SGA I I + ++ F I G AV A+ L+ +E ++ ++
Sbjct: 280 SRIQGVRKVSGASIGISEEVDGKTEREFTISGSSHAVEKAKDLLYHNLEREEQRRAEAAN 339
Query: 367 NPE 369
E
Sbjct: 340 TAE 342
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 139/338 (41%), Gaps = 57/338 (16%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGA-----CPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG G + ++ SGAK+ ++ + DRIV +SG V+
Sbjct: 49 SVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVET-------------- 94
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
V +A + + N R+ + + + +VIPA CG +IGKGG KI
Sbjct: 95 --------VLSAAKMVISEMY-RDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKI 145
Query: 147 KDIRDLSGANVQVASD---MLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
+R+ + A +Q+ + +P ERIVT+ G A+ +I ++ E
Sbjct: 146 NSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHLIHED-------G 198
Query: 204 VIPYEPKTMNAGPVILSG---GQAYTLHGEYAVPVQEVA----GKKQPHPLAGLAVLGIE 256
I YE N G + G GQ Y G +P+Q A G + P + + +
Sbjct: 199 NIRYENLGTNYGMSGMMGKGLGQGY---GMGMMPMQGAAAMYGGMQMPMGMD----MASQ 251
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
G+G P + + G T D ++ +TDD G ++GK G L E +
Sbjct: 252 GMGMAPGMPGVVPGQEYWGMSQHGLGT-DMHTVLKLSITDDAVGPLLGKGGCNLKEYISV 310
Query: 317 SGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLI 350
SGA I + + ++ + IQG AV AQ L+
Sbjct: 311 SGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV 348
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTI 181
+ LK++I GS+IGK G I I+D SGA V+V+ S+ P + +RIV + G +T+
Sbjct: 36 MALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVETV 95
Query: 182 SQA 184
A
Sbjct: 96 LSA 98
>gi|406607447|emb|CCH41238.1| Insulin-like growth factor 2 mRNA-binding protein 2
[Wickerhamomyces ciferrii]
Length = 329
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 15/176 (8%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVTVSGSVDNSSTSSV 78
F V+V E +IG G ++ +R ++G K +S CPDRI+TV+G +D+++ +
Sbjct: 38 FRILVSVKEAGIVIGKNGSVIADIRDQTGVKAGVSRVVQGCPDRILTVTGPLDSTAQA-- 95
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSL 138
G L + +D Y + R L E + L+L+IP G++
Sbjct: 96 -LGMIAKALATSPLDETIFQYFPLKRLLPPGE------EGST----SLRLLIPNAQMGTI 144
Query: 139 IGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
IG+ G +IK +++ + + D L STER+V + G P+ I A I LIE
Sbjct: 145 IGRQGARIKTLQENYDVRLVASKDFLQNSTERLVELQGLPEKIEIASKIIARCLIE 200
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINIHT-GTESHKKMFHIQGCQEAVSLAQYLINMCIEL 356
GC+IGKAGSR+ EIR++SGAQI I + +++++ F + G ++V A + +E
Sbjct: 256 FVGCLIGKAGSRIQEIRKVSGAQITIASEDDDNNERSFTLVGSNKSVDKALSFLQQNLEK 315
Query: 357 QKNN 360
+K
Sbjct: 316 EKER 319
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
P+ G LIGK G +I++IR +SGA + +AS+ + ER T+ G+ ++ +A+
Sbjct: 252 FPSQFVGCLIGKAGSRIQEIRKVSGAQITIASED-DDNNERSFTLVGSNKSVDKAL 306
>gi|119583084|gb|EAW62680.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_f [Homo
sapiens]
Length = 440
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
+ + +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 345 SYYSYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEP 402
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ ++
Sbjct: 403 LEGSEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
V S D + S+++T P W + + +++ Y R + +
Sbjct: 313 VGFSADETWDSAIDTWSPSE--WQMAYEPQVEYHSYYS-----YAGGRGSYGDLGGPIIT 365
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A
Sbjct: 366 TQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQ 424
Query: 186 Y 186
Y
Sbjct: 425 Y 425
>gi|74198765|dbj|BAE30613.1| unnamed protein product [Mus musculus]
Length = 450
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 348 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 405
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 406 SEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|354500002|ref|XP_003512092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Cricetulus griseus]
Length = 440
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 348 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 405
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 406 SEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 314 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 373
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|354500004|ref|XP_003512093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 4
[Cricetulus griseus]
Length = 439
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 358 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 418 DQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 314 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 373
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|62088704|dbj|BAD92799.1| heterogeneous nuclear ribonucleoprotein K isoform a variant [Homo
sapiens]
Length = 442
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 42 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 93
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 94 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 130
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 131 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 189
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 190 LI--SESPIKGRAQPYDP 205
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 350 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 407
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 408 SEDRIITITGTQDQIQNAQYLLQNSVK 434
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 316 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 375
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 376 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 427
>gi|168277712|dbj|BAG10834.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|184186906|gb|ACC69193.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
Length = 440
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 348 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 405
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 406 SEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 314 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 373
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 159/345 (46%), Gaps = 38/345 (11%)
Query: 6 DGKID--EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPD 61
+ KID +D ++ R L S V + +IG G ++ +R+E+ A+I + D C +
Sbjct: 33 EKKIDNKDDLVVVYRILCPSGV----MGSVIGKSGKVINLIRQETRARIKVVDPFPGCSE 88
Query: 62 RIVTVSGSV-DNSSTSSVETGYPGHTLWVTSVDN-VCTAYNFMCRSL----EDYHINRNR 115
R++T+ SV + +E +++ + S + ++ + SL E+ I+R+
Sbjct: 89 RVITIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDD 148
Query: 116 MENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASD---MLPMST 168
C +L++P++ C +IGK G IK+IR + ANV+V ASD M
Sbjct: 149 FREC-------RLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDF 201
Query: 169 ERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP--KTMNAGPVILSGGQAYT 226
+ IV + G +++ +A++ + ++ +V IP + + + A +I S Y
Sbjct: 202 DNIVMISGETESVKKALFAVSAIM----YKVSPREQIPLDTTVQEVPASIIIPSDLSIYP 257
Query: 227 LHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG-GKDTGD 285
G Y P Q+ + + + + L +G G + P + + S V G G +
Sbjct: 258 QAGLY--PSQDSIFQHGANVSSFIGTLP-QGYGENAANPLPVFSASALPVVHGFGGSSRS 314
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH 330
+ + +++ G VIGK G + IRQ SG+ I ++ +H
Sbjct: 315 EKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNH 359
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 141/353 (39%), Gaps = 63/353 (17%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGAC---PDRIVTVSGSVDNSSTSSVETGYPG 84
++I +IG GG ++ +R+ SG+ I + D D ++TV+ + S+
Sbjct: 326 SKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM------ 379
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
++E + + ++ + ++++L++ + G +IGK G
Sbjct: 380 --------------------AVEAVLLLQEKINDEDEDKVKMQLLVSSKVIGCIIGKSGS 419
Query: 145 KIKDIRDLSGANVQVAS-DMLPMSTE---RIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
I +IR + A++ ++ + P S + +V + G + A+ QI L L + L+
Sbjct: 420 IISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLR-- 477
Query: 201 KGAVIPYEPKTMNAGPV-----------ILSGGQAYTLHGEYAVP-VQEVAGKKQPHPLA 248
E + N P + G A +VP V V ++P +
Sbjct: 478 -----DRETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFDRRPETGS 532
Query: 249 GLAVL----GIEGIGSTSL--TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
+++L GI G GS + T + S + G + E+ + + G V
Sbjct: 533 SMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQS----TTMEVRIPANAVGKV 588
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCI 354
+G+ G L IR+ISGA I I SH ++ I G E A+ L I
Sbjct: 589 MGRGGGNLDNIRRISGAMIEISDSKNSHGGRVALISGTSEQKRTAENLFQAFI 641
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK------KMFH 335
D +D V+ +++++ + GC+IGK+GS + EIR+ + A I+I G + K ++
Sbjct: 393 DEDEDKVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKSADPNDELVE 452
Query: 336 IQGCQEAV--SLAQYLINMCIELQKNNTTNTSDNP 368
I G V +L Q ++ + ++ ++ T + + P
Sbjct: 453 ISGEVSNVRDALIQIVLRLRDDVLRDRETGSRNQP 487
>gi|332236655|ref|XP_003267515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Nomascus leucogenys]
gi|332832094|ref|XP_001154460.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 8 [Pan
troglodytes]
gi|338719652|ref|XP_003364039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475607|ref|XP_003809225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5 [Pan
paniscus]
gi|402897763|ref|XP_003911914.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Papio anubis]
gi|410978219|ref|XP_003995493.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Felis catus]
gi|426362137|ref|XP_004048237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Gorilla gorilla gorilla]
gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus]
gi|26353476|dbj|BAC40368.1| unnamed protein product [Mus musculus]
gi|194374597|dbj|BAG62413.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 358 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 417
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 418 DQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 314 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 373
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 374 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|74225344|dbj|BAE31602.1| unnamed protein product [Mus musculus]
Length = 459
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 348 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 405
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 406 SEDRIITITGTQDQIQNAQYLLQNSVK 432
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 367 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 425
>gi|427797377|gb|JAA64140.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp, partial
[Rhipicephalus pulchellus]
Length = 303
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+++L++ +H G +IG+ GC+IK++R+ +GAN++V P STERIV V G+P +
Sbjct: 92 EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGSPSVVVDC 151
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMN 213
I QIC ++ + +KG PY+P +
Sbjct: 152 IKQICDIV---GVAPIKGLNKPYDPHNFD 177
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 7/56 (12%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGS 69
MR L H S C+IG GC ++ LR+ +GA I + CP +RIV V+GS
Sbjct: 93 MRLLMHQS----HAGCIIGRAGCRIKELRESTGANIKVHGSCCPGSTERIVKVTGS 144
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 25/36 (69%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
E +++ AGC+IG+AG R+ E+R+ +GA I +H
Sbjct: 92 EMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVH 127
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 33/187 (17%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
+++T+R + V+ E +IG G V LR E+G K ++ DR++TV+G +
Sbjct: 210 SMLTLRAI----VSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPL 265
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLK 127
+S AY+ + +SL + ++N ++
Sbjct: 266 QGTSK----------------------AYSIVAKSLLEGAPQMGMGGVVQNNGTH--SVR 301
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+ I +AI++
Sbjct: 302 LLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIWE 361
Query: 188 ICLVLIE 194
I LI+
Sbjct: 362 IGKCLID 368
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT--ESHKKMFHIQGC 339
+ G++ I + D+ GC+IG+ G+++ EIR+ SGA+I+I ++ ++MF I G
Sbjct: 444 EDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGS 503
Query: 340 QEAVSLAQYLINMCIELQK 358
+A A YL+ +E +K
Sbjct: 504 AQANEKALYLLYENLEAEK 522
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ IP+ G +IG+GG KI +IR SGA + +A + ER+ T+ G+ +A+Y
Sbjct: 454 ISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKAPHDDTGERMFTIMGSAQANEKALY 512
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+ ++ + G +IGK G + D+RD +G V S ++ +R++TV G S+
Sbjct: 212 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGV-SKVVQGVHDRVLTVTGPLQGTSK 270
Query: 184 AIYQICLVLIECTLQVVKGAVI 205
A + L+E Q+ G V+
Sbjct: 271 AYSIVAKSLLEGAPQMGMGGVV 292
>gi|156844703|ref|XP_001645413.1| hypothetical protein Kpol_534p35 [Vanderwaltozyma polyspora DSM
70294]
gi|156116075|gb|EDO17555.1| hypothetical protein Kpol_534p35 [Vanderwaltozyma polyspora DSM
70294]
Length = 482
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 165/407 (40%), Gaps = 78/407 (19%)
Query: 7 GKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIV 64
G D + M CL V E S ++G G + +++ + +I++++ + P+R++
Sbjct: 95 GTCDRSVYLRMLCL------VKEASLVVGHKGERISKIKNVTSTRINVSENSRDIPERVI 148
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTA------YNFMCRSLEDYHINRNRMEN 118
+ GS N S L V S+ N A YN +D+ +N +
Sbjct: 149 HIRGSPQNVSK--------AFALIVRSITNSKHAKASNDPYN--NGDNDDFMTTKNSI-- 196
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
P+ + L+IP G +IGK G K+ +I +LS A + + L S +RI+T+ G
Sbjct: 197 ----PITINLLIPHFLMGYIIGKHGSKLHEIEELSAAKLSASPQQLLSSNDRILTITGIE 252
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIP--YEPKTMNAGPVILSGGQAYTL------HGE 230
D+I A++ IC + + + P Y+P M + V+L+ TL H +
Sbjct: 253 DSIQTAVFHICKTISSNINETQRNNRRPIFYQPNPMYS--VLLNNYPNMTLNFAHQQHHQ 310
Query: 231 Y------------------------AV--PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
Y AV P+ ++G Q H AG ++ I T+
Sbjct: 311 YHPTDKYPTNRGKKRVPQLRASMLVAVPQPISNISGVPQ-HNNAGADLMTNTPIIYTTAN 369
Query: 265 PAALAALSGS------RV----KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIR 314
A + + + RV S + T V EI + + G VIGK G + I+
Sbjct: 370 VANAPSFTPNYGIPSVRVIESKSSNLQQTPLAMVTQEIYIDESFVGNVIGKDGKHINSIK 429
Query: 315 QISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNN 360
+G I I + ++ I+G A A LI+ IE K N
Sbjct: 430 SSTGCSIFIDNPVSGALERKLTIRGTSMASQAAIMLISNKIETDKMN 476
>gi|45361501|ref|NP_989327.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
gi|39794355|gb|AAH64170.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 37 DMMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 92
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ + +LE+Y + +C +L+L+I
Sbjct: 93 T----------------------IGEILKKIIPTLEEYQHFKGNDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I I +
Sbjct: 126 QSLAGGIIGVKGAKIKELREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKVILDL 185
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E VKG PY+P
Sbjct: 186 ISESP---VKGRSQPYDP 200
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 315 DIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 374
Query: 341 EAVSLAQYLINMCIE 355
+ + AQ+L+ ++
Sbjct: 375 DQIQNAQFLLQNSVK 389
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A +
Sbjct: 324 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQNAQF 382
>gi|154794977|gb|ABS86521.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 250
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 28 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 87
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 88 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 145
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 146 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 205
Query: 300 ----GCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQG 338
GC+IGK G+++ EIR++SG++I+I ++ ++MF I G
Sbjct: 206 ADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITG 250
>gi|367008424|ref|XP_003678712.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
gi|359746369|emb|CCE89501.1| hypothetical protein TDEL_0A01690 [Torulaspora delbrueckii]
Length = 430
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 153/374 (40%), Gaps = 61/374 (16%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+ M CL V + S ++G G + +++ + +I+++D P+R+V V GS +N
Sbjct: 85 LRMLCL------VKQASMIVGHKGENISKIKAVTSTRINVSDNVRGVPERVVYVRGSCEN 138
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
V A+ + RS+ D H N + L +I
Sbjct: 139 ----------------------VAKAFGMIVRSINDRHGEEGYDGNSIMSTINL--LISH 174
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
G +IGK G ++++I +LS A + + L MS +RI+++ G D I A + I +
Sbjct: 175 HLMGCIIGKHGSRLREIEELSAARLSASPQQLIMSNDRILSITGVADAIHIATFYIGQTI 234
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPV--ILSGGQAYTLHGEYA---VPVQEVAGKKQPHPL 247
++C I Y+P + + V GG ++ H +Y AGK+ P
Sbjct: 235 MKCKEAFKSKKAIFYQPSPVYSVLVNGASHGGYSHQKHHQYHPNDKYTNSRAGKRVVRP- 293
Query: 248 AGLAV------LGIEGIGS------------TSLTPAALAALSGSRVKSGGKDTGDDF-- 287
A +A L E GS TS TP+ + R+
Sbjct: 294 AMMATTPTAQPLPQENNGSQVTYTAAAAANATSFTPS--FTIPNVRIIDEPAPPAQTMAI 351
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLA 346
+E E+ + ++ G +IGK G + I++ +G I I E S ++ ++G A
Sbjct: 352 IEQEVYIDENYVGNIIGKEGKHINSIKEATGCSIYIADPVEGSLERRLTVKGTSMGSQAA 411
Query: 347 QYLINMCIELQKNN 360
LI+ IE+ + N
Sbjct: 412 IMLISNKIEIDRAN 425
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 58/381 (15%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
KI+ D L+ R L ++ + +IG G ++ +R + AKI + D C R++T
Sbjct: 29 KINRDELVVYRIL----CPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVIT 84
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED----YHINRNRMENCSP 121
+ SV T L D + Y+ + S E+ +++R+ + C
Sbjct: 85 IYCSVKEKQEEIGFTKSENEPLCCAQ-DALLKVYDAIVASDEENNTKTNVDRDDNKEC-- 141
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-------MLPMSTERIVTV 174
+L++P + SLIGK G IK IR + A+V+V S + M + +V +
Sbjct: 142 -----RLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVI 196
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN--AGPVILS---GGQAYTLHG 229
G P+++ QA++ + ++ ++ IP + + + A VI+ Y G
Sbjct: 197 SGEPESVKQALFAVSAIM----YKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTG 252
Query: 230 EYAVP---VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GGKDTGD 285
Y+ +Q+ AG P L+V +G T+ P + A S GG +
Sbjct: 253 FYSNQDHILQQGAG--VPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSE 310
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH---------------TGTESH 330
+ V + +I VIGK GS + IR+ SG+ I ++ T TES
Sbjct: 311 ELVFKVLCPLCNIMR-VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESP 369
Query: 331 KKMFHIQGCQEAVSLAQYLIN 351
M + EAV L Q IN
Sbjct: 370 DDMKSM--AVEAVLLLQEYIN 388
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDG--ACPDR----IVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG ++R+R+ SG+ I + D C D IVT + S D+ + +VE
Sbjct: 326 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA-----V 380
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
L L++Y IN EN ++++L++ + G +IGK G I
Sbjct: 381 LL-----------------LQEY-INDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVI 417
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP 206
+IR + AN+ ++ + +V V G ++ A+ QI L L E L K +V
Sbjct: 418 NEIRKRTNANICISKG----KKDDLVEVSGEVSSVRDALIQIVLRLREDVLG-DKDSVAT 472
Query: 207 YEPKTMNAGPVILSGGQ--AYTL 227
+P LSG YTL
Sbjct: 473 RKPPARTDNCSFLSGSSNAGYTL 495
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQE 341
D + V+ +++++ + GCVIGK+GS + EIR+ + A I I G + + + G E
Sbjct: 389 DEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKKDD--LVEVSG--E 444
Query: 342 AVSLAQYLINMCIELQKN---NTTNTSDNPEPADLDAAISAFMTASVNS 387
S+ LI + + L+++ + + + PA D +F++ S N+
Sbjct: 445 VSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNC--SFLSGSSNA 491
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 137/337 (40%), Gaps = 53/337 (15%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG G +R LR+ A+I+I+D + P+RI+++ +D
Sbjct: 34 VIGKSGENIRNLRRMFMARINISDNSGPERILSLEADLD--------------------- 72
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------------LQLKLVIPATHCGSLI 139
T + + LE +ME C P P + L++++ + G+LI
Sbjct: 73 ----TILEILTQCLE-------KMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALI 121
Query: 140 GKGGCKIKDIRDLSGANV-QVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
G+GG +I D+R+ V +V + P ST+RIV + G I I I ++ C
Sbjct: 122 GRGGGRINDLREKCDLRVLKVYQTVCPDSTDRIVQLVG---AIPLVIDCIGKIVDMCKET 178
Query: 199 VVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGI 258
V+ + Y+ + + GG A G +P L A E
Sbjct: 179 PVREPKVNYDAQNYDHAAANHYGGWAQNAIRPNNNLTTRSLGFSRPGFLKHQASYKNEHY 238
Query: 259 GSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
+ P + S ++ D D+ EI L + G +IG GSR+ ++R SG
Sbjct: 239 DYS--YPNNYREMDTS-FRNSHYDEQDNNEVQEIRLPHKVVGAIIGPGGSRIQQVRMDSG 295
Query: 319 AQINIHTGTES-HKKMFHIQGCQEAVSLAQYLINMCI 354
A I I + + +++ I G + V A +IN C+
Sbjct: 296 AHITISSPDRNPQERVVTISGNTQDVKRAFSMINECL 332
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 46/74 (62%), Gaps = 5/74 (6%)
Query: 122 QP-LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
QP ++L+ +IP+ GS+IGK G I+++R + A + ++ + P ERI+++ + DT
Sbjct: 17 QPCIELRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNSGP---ERILSLEADLDT 73
Query: 181 ISQAIYQICLVLIE 194
I + + Q CL +E
Sbjct: 74 ILEILTQ-CLEKME 86
>gi|427795265|gb|JAA63084.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 228
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQEAVSLAQYL 349
E+ + +D+ GC+IGK GS++ EIRQ+SGA I I E K + I G EA++LAQYL
Sbjct: 54 EMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYL 113
Query: 350 INMCIELQKNNTTNTS 365
IN +EL KN T + S
Sbjct: 114 INTSMELHKNLTLDLS 129
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G +IGKGG KI +IR LSGA +++ S+ S +R VT+ G P+ I+ A Y
Sbjct: 54 EMTIPNDLIGCIIGKGGSKINEIRQLSGATIKI-SNSEEGSKDRTVTISGTPEAINLAQY 112
Query: 187 QI 188
I
Sbjct: 113 LI 114
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 58/381 (15%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
KI+ D L+ R L ++ + +IG G ++ +R + AKI + D C R++T
Sbjct: 29 KINRDELVVYRIL----CPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVIT 84
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED----YHINRNRMENCSP 121
+ SV T L D + Y+ + S E+ +++R+ + C
Sbjct: 85 IYCSVKEKQEEIGFTKSENEPLCCAQ-DALLKVYDAIVASDEENNTKTNVDRDDNKEC-- 141
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-------MLPMSTERIVTV 174
+L++P + SLIGK G IK IR + A+V+V S + M + +V +
Sbjct: 142 -----RLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVI 196
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN--AGPVILS---GGQAYTLHG 229
G P+++ QA++ + ++ ++ IP + + + A VI+ Y G
Sbjct: 197 SGEPESVKQALFAVSAIM----YKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTG 252
Query: 230 EYAVP---VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GGKDTGD 285
Y+ +Q+ AG P L+V +G T+ P + A S GG +
Sbjct: 253 FYSNQDHILQQGAG--VPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSE 310
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH---------------TGTESH 330
+ V + +I VIGK GS + IR+ SG+ I ++ T TES
Sbjct: 311 ELVFKVLCPLCNIMR-VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESP 369
Query: 331 KKMFHIQGCQEAVSLAQYLIN 351
M + EAV L Q IN
Sbjct: 370 DDMKSM--AVEAVLLLQEYIN 388
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 136/330 (41%), Gaps = 60/330 (18%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDG--ACPDR----IVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG ++R+R+ SG+ I + D C D IVT + S D+ + +VE
Sbjct: 326 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA-----V 380
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
L L++Y IN EN ++++L++ + G +IGK G I
Sbjct: 381 LL-----------------LQEY-INDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVI 417
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP 206
+IR + AN+ ++ + +V V G ++ A+ QI L L E L K +V
Sbjct: 418 NEIRKRTNANICISKG----KKDDLVEVSGEVSSVRDALIQIVLRLREDVLGD-KDSVAT 472
Query: 207 YEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA-VLGIEGIGSTSLTP 265
+P LSG AG P ++ +A G G GS P
Sbjct: 473 RKPPARTDNCSFLSGSSN--------------AGYTLPSFMSSMASTSGFHGYGSF---P 515
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
A L + S G+ +E I++ V+GK G L IR+ISGA I I
Sbjct: 516 AGDNVLGSTGPYSYGRLPSSSALE--ILIPAHAMSKVMGKGGGNLENIRRISGAMIEISA 573
Query: 326 GTESH-KKMFHIQGCQEAVSLAQYLINMCI 354
SH + + G E + A+ L+ +
Sbjct: 574 SKTSHGDHIALLSGTLEQMRCAENLVQAFV 603
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQE 341
D + V+ +++++ + GCVIGK+GS + EIR+ + A I I G KK ++ E
Sbjct: 389 DEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKG----KKDDLVEVSGE 444
Query: 342 AVSLAQYLINMCIELQKN---NTTNTSDNPEPADLDAAISAFMTASVNS 387
S+ LI + + L+++ + + + PA D +F++ S N+
Sbjct: 445 VSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNC--SFLSGSSNA 491
>gi|312071663|ref|XP_003138712.1| hypothetical protein LOAG_03127 [Loa loa]
Length = 201
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 50/223 (22%)
Query: 149 IRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYE 208
+++ G ++V + P STER+V++ G PD I + I +L E +KG PYE
Sbjct: 1 MKEELGVQMKVFAQCPPQSTERVVSIKGAPDKIIACVNHIMNMLKEIP---IKGVTKPYE 57
Query: 209 ----------------PKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
P GP+I G A T +G Y G+ P + G
Sbjct: 58 SMFYDPSYSAEYGGYPPDRNYRGPMI-RGPMAMTSYGNY--------GRNFPRQIGGRG- 107
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
L+ AL G T++ + +++ G +IGK G R+
Sbjct: 108 ---------PLSAVALPPYMGPEES------------TQVTIPNELGGTIIGKGGERINR 146
Query: 313 IRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIE 355
+R+ SGAQI + ES +++ I G A+ AQYL+ C+
Sbjct: 147 VREESGAQIVVGPQQESGERIITITGTSTAIQTAQYLLQQCVR 189
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I +R+ SGA + V S ERI+T+ G I A Y
Sbjct: 125 QVTIPNELGGTIIGKGGERINRVREESGAQIVVGPQQ--ESGERIITITGTSTAIQTAQY 182
Query: 187 QICLVLIECTLQVVKG 202
+L +C Q V G
Sbjct: 183 ----LLQQCVRQSVAG 194
>gi|147903924|ref|NP_001080563.1| heterogeneous nuclear ribonucleoprotein K [Xenopus laevis]
gi|27882469|gb|AAH44711.1| Hnrpk protein [Xenopus laevis]
Length = 399
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 37 DLMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSMSADIE 92
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ + +LE+Y + +C +L+L+I
Sbjct: 93 T----------------------IGEILKKIIPTLEEYQHFKGNDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I I +
Sbjct: 126 QSLAGGIIGVKGAKIKELREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKVILDL 185
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E VKG PY+P
Sbjct: 186 ISESP---VKGRTQPYDP 200
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G V T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 315 DIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 374
Query: 341 EAVSLAQYLINMCIE 355
+ + AQ+L+ ++
Sbjct: 375 DQIQNAQFLLQNSVK 389
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A +
Sbjct: 324 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQNAQF 382
>gi|154794979|gb|ABS86522.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154794985|gb|ABS86525.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 234
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 12 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 71
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 72 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 129
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 130 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 189
Query: 300 ----GCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQG 338
GC+IGK G+++ EIR++SG++I+I ++ ++MF I G
Sbjct: 190 ADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITG 234
>gi|154794987|gb|ABS86526.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 226
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 14/225 (6%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 4 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 63
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 64 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 121
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 122 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 181
Query: 300 ----GCVIGKAGSRLLEIRQISGAQINIHT--GTESHKKMFHIQG 338
GC+IGK G+++ EIR++SG++I+I ++ ++MF I G
Sbjct: 182 ADMVGCIIGKGGAKINEIRRMSGSRISIAKTPHDDTGERMFTITG 226
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 55/262 (20%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++VS +D
Sbjct: 41 DEMVELRVLLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADID 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
T+ + + T + S D+ +C +L+L+I
Sbjct: 97 --------------TIGEILLKIIPTLEEYQHYSGTDF--------DC-----ELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V V G P+ + + I I +
Sbjct: 130 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVVECIKVILEL 189
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
+ E +KG PY+P + + Y +G + + +E + P+ G
Sbjct: 190 IAEAP---IKGRAQPYDPNFYD---------ETYD-YGGFTMMYEERGRR----PMGGFP 232
Query: 252 VLGIEGI-------GSTSLTPA 266
+ G G GS S+ P+
Sbjct: 233 MRGRGGFDRMPPGRGSRSVPPS 254
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 276 VKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
+SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I E S
Sbjct: 340 FQSGGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE 399
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIE 355
++ I G Q+ + AQYL+ ++
Sbjct: 400 DRIITITGTQDQIQNAQYLLQNSVK 424
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 359 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 417
>gi|89272931|emb|CAJ83219.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 376
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 14 DMMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 65
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 66 ------------------ADIETIGEILKKIIPTLEEYQHFKGNDFDC-----ELRLLIH 102
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I I +
Sbjct: 103 QSLAGGIIGVKGAKIKELREKTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECIKVILDL 162
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E VKG PY+P
Sbjct: 163 ISESP---VKGRSQPYDP 177
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 292 DIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 351
Query: 341 EAVSLAQYLINMCIE 355
+ + AQ+L+ ++
Sbjct: 352 DQIQNAQFLLQNSVK 366
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A +
Sbjct: 301 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQNAQF 359
>gi|363744462|ref|XP_425032.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Gallus gallus]
Length = 430
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 92 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 129 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 187
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 188 LI--SESPIKGRAQPYDP 203
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 338 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 395
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 396 SEDRIITITGTQDQIQNAQYLLQNSVK 422
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 357 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 415
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++VS +D
Sbjct: 41 DEMVELRVLLQSK----NAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADID 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
G L + +LE+Y +C +L+L+I
Sbjct: 97 TI----------GEILLK------------IIPTLEEYQHYNGIDFDC-----ELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V V G PD + + I I +
Sbjct: 130 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLVGGKPDRVVECIKVILDL 189
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E +KG PY+P
Sbjct: 190 VSEAP---IKGRAQPYDP 204
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 276 VKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
+SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I E S
Sbjct: 342 FQSGGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE 401
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIE 355
++ I G Q+ + AQYL+ ++
Sbjct: 402 DRIITINGTQDQIQNAQYLLQNSVK 426
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T++G D I A Y
Sbjct: 361 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITINGTQDQIQNAQY 419
>gi|125660102|gb|ABN49279.1| IP17411p [Drosophila melanogaster]
Length = 300
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH----KKMFHIQGCQEAVSLA 346
E+ +++D+ GC+IGK G+++ EIRQISGA I I E + I G ++V+LA
Sbjct: 48 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPDSVALA 107
Query: 347 QYLINMCIELQKNN 360
QYLINM +ELQK N
Sbjct: 108 QYLINMSVELQKAN 121
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 54/96 (56%), Gaps = 7/96 (7%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
Q Q ++ + G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD
Sbjct: 43 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 102
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAG 215
+++ A Y LI ++++ K ++ N G
Sbjct: 103 SVALAQY-----LINMSVELQKANLLEQAQSQQNGG 133
>gi|363744460|ref|XP_003643054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Gallus gallus]
Length = 426
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 185 LI--SESPIKGRAQPYDP 200
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 345 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 404
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 405 DQIQNAQYLLQNSVK 419
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 354 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 412
>gi|149236405|ref|XP_001524080.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452456|gb|EDK46712.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRI 63
D K + D LI R L V+ E CLIG G ++ +R E+ K IS +RI
Sbjct: 115 DDKSNADALINYRVL----VSAKEAGCLIGQNGGVIDSIRNETNTKAGISRLTPGTHERI 170
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+TVSG +D+S+ + Y L D+ YN+ ++ S P
Sbjct: 171 LTVSGKLDDSAKA---LSYFAQALC----DSAIELYNYFP------------LKQLSSTP 211
Query: 124 ------LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
++L+IP + G+LIG G +I+ I+ G ++ + LP S ER+V + G
Sbjct: 212 CVEGETTIIRLLIPNSQMGTLIGSKGARIQQIQQSFGVSMIASKLFLPGSNERLVELQGT 271
Query: 178 PDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
D + ++ I LIE V G Y P++
Sbjct: 272 VDDLYDSLRVISRCLIEDFSSSV-GTTTYYVPRS 304
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 62/278 (22%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++++ A G LIG+ G I IR+ + + S + P + ERI+TV G D ++
Sbjct: 124 INYRVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGI-SRLTPGTHERILTVSGKLDDSAK 182
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEP-KTMNAGP----------VILSGGQAYTLHGEYA 232
A+ L + +++ Y P K +++ P +++ Q TL G
Sbjct: 183 ALSYFAQALCDSAIELYN-----YFPLKQLSSTPCVEGETTIIRLLIPNSQMGTLIGSKG 237
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAA---LAALSGS--------RVKSGGK 281
+Q++ G+ I S P + L L G+ RV S +
Sbjct: 238 ARIQQIQQS-----------FGVSMIASKLFLPGSNERLVELQGTVDDLYDSLRVIS--R 284
Query: 282 DTGDDFVET--------------------EIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
+DF + I +D+ G +IGK GSR+ +R++SGA I
Sbjct: 285 CLIEDFSSSVGTTTYYVPRSHQMTRKSTATINFPNDMVGALIGKNGSRIQGVRKVSGAMI 344
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I + S +++F I G Q+AV A+ L+ +E ++
Sbjct: 345 GISEAEDGSDERVFTITGTQQAVEKAKGLLYHNLEREE 382
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 55/262 (20%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++VS +D
Sbjct: 41 DEMVELRVLLRS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVSADID 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
T+ + + T + S D+ +C +L+L+I
Sbjct: 97 --------------TIGEILLKIIPTLEEYQHYSGTDF--------DC-----ELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V V G P+ + + I I +
Sbjct: 130 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVVECIKVILEL 189
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
+ E +KG PY+P + + Y +G + + +E + P+ G
Sbjct: 190 IAEAP---IKGRAQPYDPNFYD---------ETYD-YGGFTMMYEERGRR----PMGGFP 232
Query: 252 VLGIEGI-------GSTSLTPA 266
+ G G GS S+ P+
Sbjct: 233 MRGRGGFDRMPPGRGSRSVPPS 254
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 276 VKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
+SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I E S
Sbjct: 340 FQSGGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE 399
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIE 355
++ I G Q+ + AQYL+ ++
Sbjct: 400 DRIITITGTQDQIQNAQYLLQNSVK 424
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 359 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 417
>gi|240281620|gb|EER45123.1| KH domain RNA-binding protein [Ajellomyces capsulatus H143]
Length = 275
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 95/210 (45%), Gaps = 38/210 (18%)
Query: 8 KIDED---TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
K DE+ + +T+R + S E +IG G V LR E+G K ++ DR
Sbjct: 34 KTDEEYAQSTLTLRAIVSS----KEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDR 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENC 119
++TV+G + ++ AY + + L + N
Sbjct: 90 VLTVTGPLQGTAK----------------------AYAIVAKGLLEGAPQLGMGGVASNN 127
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P+ +L+I G++IG+ G KIK I+D SG + +MLP STERIV V G P+
Sbjct: 128 GTHPV--RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPE 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEP 209
I +A+++I LI+ Q G V+ Y P
Sbjct: 186 GIEKAVWEIGKCLID-DWQRGTGTVL-YNP 213
>gi|449272169|gb|EMC82214.1| Heterogeneous nuclear ribonucleoprotein K [Columba livia]
Length = 422
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 185 LI--SESPIKGRAQPYDP 200
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+ +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 346 DLGGPIITTQVTIPKDLNLSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 405
Query: 341 EAVSLAQYLIN 351
+ + AQYL+
Sbjct: 406 DQIQNAQYLLQ 416
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP S+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 355 QVTIPKDLNLSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 413
>gi|197260143|gb|ACH56617.1| poly (rC) binding protein 2-like protein [Ambystoma mexicanum]
Length = 139
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 38/115 (33%)
Query: 154 GANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
GA VQVA DMLP STER +T+ G P +I + + QIC+V++E KG IPY PK +
Sbjct: 1 GAQVQVAGDMLPNSTERAITIAGIPASIIECVKQICVVMLESP---PKGVTIPYRPKPSS 57
Query: 214 AGPVILSGGQ----------------------------------AYTLHGEYAVP 234
A PVI +GGQ AYT+ G+YA+P
Sbjct: 58 A-PVIFAGGQVSRQAGGHACETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIP 111
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 34/345 (9%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ + +IG GG IV+ L+ E+GA IS+ C +R++T++ S + S S
Sbjct: 229 DRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS-------- 280
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ + V +N RS+E I + P+ +LV+P+ G L+GKGG
Sbjct: 281 ----PAQNGVILVFN---RSIE-AGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTI 332
Query: 146 IKDIRDLSGANVQ-VASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL--QV 199
I ++R SGA ++ + SD +P +++V + G + +Y I L + +
Sbjct: 333 ISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT 392
Query: 200 VKGAVIPYEPKTMNAGPV-ILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV-LGIEG 257
+ GA I P + ++ LH V + L + ++
Sbjct: 393 LNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDH 452
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDF-------VETEIVLTDDIAGCVIGKAGSRL 310
S L P+ R GG + G EIV+ +++ G V G+ G+ L
Sbjct: 453 PTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNL 512
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+R+ISGA++ +H + ++ I G + AQ L+ I
Sbjct: 513 ARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 557
>gi|448533092|ref|XP_003870552.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis Co 90-125]
gi|380354907|emb|CCG24423.1| hypothetical protein CORT_0F01960 [Candida orthopsilosis]
Length = 384
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 95/214 (44%), Gaps = 32/214 (14%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRI 63
D + D LI R L V+ E CLIG G ++ +R+E+ K I+ +RI
Sbjct: 109 DDNSNADALINYRVL----VSAKEAGCLIGQNGKVIDSIREETNTKAGISRLIAGTHERI 164
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+TVSG +D+ + + Y L +S++ YN+ ++ S P
Sbjct: 165 LTVSGKLDDCAKA---LSYFAQALLGSSIE----TYNYFP------------LKQLSSTP 205
Query: 124 ------LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
L+L+IP + G+LIG G +I+ I+ ++ + LP S ER+V + G
Sbjct: 206 CVEHETTILRLLIPNSQMGTLIGARGARIQQIQHNFAISMIASKSFLPGSNERLVELQGT 265
Query: 178 PDTISQAIYQICLVLIECTLQVVKGAVIPYEPKT 211
D + A+ I LIE V G Y PK+
Sbjct: 266 VDDLYDALRIISRCLIEDFSSSV-GTTTYYVPKS 298
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 119/278 (42%), Gaps = 62/278 (22%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++++ A G LIG+ G I IR+ + + S ++ + ERI+TV G D ++
Sbjct: 118 INYRVLVSAKEAGCLIGQNGKVIDSIREETNTKAGI-SRLIAGTHERILTVSGKLDDCAK 176
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEP-KTMNAGP----------VILSGGQAYTLHGEYA 232
A+ L+ +++ Y P K +++ P +++ Q TL G
Sbjct: 177 ALSYFAQALLGSSIETYN-----YFPLKQLSSTPCVEHETTILRLLIPNSQMGTLIGARG 231
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAA---LAALSGS--------RVKSGGK 281
+Q++ H A I I S S P + L L G+ R+ S +
Sbjct: 232 ARIQQI-----QHNFA------ISMIASKSFLPGSNERLVELQGTVDDLYDALRIIS--R 278
Query: 282 DTGDDFVET--------------------EIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
+DF + I +D+ G +IGK GSR+ +R++SGA I
Sbjct: 279 CLIEDFSSSVGTTTYYVPKSHQLTRKSTATISFPNDMVGALIGKNGSRIQGVRKVSGAMI 338
Query: 322 NIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I E S +++F I G Q+AV A+ L+ +E ++
Sbjct: 339 GIGEAVEGSDERVFTITGTQQAVEKAKSLLYHNLEREE 376
>gi|326927785|ref|XP_003210069.1| PREDICTED: poly(rC)-binding protein 4-like [Meleagris gallopavo]
Length = 268
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D+ E ++ +D+ GC+IG+ GS++ EIRQ+SGA I I TE S ++ I G
Sbjct: 71 GLDSNSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHITITG 130
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPTPHPG 398
+++LAQYLI C+E K +T+ P DL S + +++L P P
Sbjct: 131 SPVSITLAQYLITTCLETAK-STSQVPLGPGSVDLGVGFSQPLAPGSSAALPAVPATPPA 189
Query: 399 SMVTLGGLS 407
+ T LS
Sbjct: 190 LLGTPYALS 198
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ ++P G +IG+ G KI +IR +SGA++++ + S+ER +T+ G+P +I+ A Y
Sbjct: 82 EFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHITITGSPVSITLAQY 140
Query: 187 QI--CLVLIECTLQVVKGAVIPYEPKTMNAGPVI---LSGGQAYTLHGEYAVPVQEVAGK 241
I CL + T QV P P +++ G L+ G + L AVP A
Sbjct: 141 LITTCLETAKSTSQV------PLGPGSVDLGVGFSQPLAPGSSAALP---AVPATPPALL 191
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSG 273
P+ L+ +G++ + +L+P++ A +G
Sbjct: 192 GTPYALSLSNFIGLKPLSFLALSPSSAAGANG 223
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 43/197 (21%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L S V +IG GG + +LR E A +++ D P+RI+TV+ +D
Sbjct: 25 IRLLIPSKV----AGSIIGKGGHNISKLRTEHNASVTVPDCPGPERILTVAADLDT---- 76
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
L V S + +LED + +++++ + G
Sbjct: 77 ---------MLRVVSE---------ILPNLEDV--------------IDIRMLVHQSQAG 104
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG KIK++R+ +GA +++ S+ P ST+RIV ++G + AI + C+ L++ +
Sbjct: 105 CIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQINGKGNLCVDAIRE-CMELLKTS 163
Query: 197 LQVVKGAVIPYEPKTMN 213
+KG PY+P +
Sbjct: 164 --PIKGMNNPYDPHNFD 178
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ IR SGA + + + LP S +RI+T+ G P+ I A Y
Sbjct: 294 QVTIPKDLAGAIIGKGGSRIRKIRMESGAAITI-DEPLPGSNDRIITISGTPNQIQMAQY 352
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQ 337
GG G + T++ + D+AG +IGK GSR+ +IR SGA I I S+ ++ I
Sbjct: 282 GGPPLGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITIS 341
Query: 338 GCQEAVSLAQYLI 350
G + +AQYL+
Sbjct: 342 GTPNQIQMAQYLL 354
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG--TESHKKMFHIQGCQEA 342
+D ++ +++ AGC+IGK G ++ E+R+ +GA+I I++ +S ++ I G
Sbjct: 89 EDVIDIRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQING---K 145
Query: 343 VSLAQYLINMCIELQKNNTTNTSDNP-EPADLDAAIS 378
+L I C+EL K + +NP +P + D S
Sbjct: 146 GNLCVDAIRECMELLKTSPIKGMNNPYDPHNFDEYFS 182
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
+ +I +R L H S + C+IG GG ++ LR+++GA+I I CP DRIV ++G
Sbjct: 89 EDVIDIRMLVHQS----QAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQING 144
Query: 69 S 69
Sbjct: 145 K 145
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+++L+IP+ GS+IGKGG I +R A+V V P ERI+TV + DT+ +
Sbjct: 24 EIRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDCPGP---ERILTVAADLDTMLRV 80
Query: 185 IYQI 188
+ +I
Sbjct: 81 VSEI 84
>gi|473912|gb|AAA21731.1| phosphoprotein [Mus cookii]
Length = 464
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVEVLNYPHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I T G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQTLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVD-NVCTAYNFMCRSLEDYHINRNRMENCSPQPL 124
V S D + S++ET P W + + + Y++ Y R + +
Sbjct: 337 VGFSADETWDSAIETWSPSE--WQMAYEPQGGSGYDY------SYAGGRGSYGDLGGPII 388
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 IY 186
Y
Sbjct: 448 QY 449
>gi|357123010|ref|XP_003563206.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 311
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 139/332 (41%), Gaps = 79/332 (23%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
E C+IG G IV+ + +SGA+I+I S + +PG T
Sbjct: 37 EAGCIIGKAGSIVKSMESQSGARINI---------------------SRHDQLFPGTTSR 75
Query: 89 VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK----LVIPATHCGSLIGKGGC 144
V V + +N + ++E + R+ Q + K LV+P+ CG+LIGKGG
Sbjct: 76 VVLVSGL---FNQLMDAME---LILERLVYQGDQVIDSKATIALVVPSVCCGALIGKGGA 129
Query: 145 KIKDIRDLSGANVQVA-SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
+K I + A ++++ D +R+VT+ G+ D +AI+ I L+E L
Sbjct: 130 TLKAITQKASAGIKISPQDNSYGLHDRLVTITGSLDNQLRAIFLILSKLLEDVL------ 183
Query: 204 VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP-HPLAGLAVLGIEGIGSTS 262
Y++P+ + + P P+ V E +G
Sbjct: 184 ---------------------------YSIPIARIVFSRYPASPVEYENVGSDEHVGRYQ 216
Query: 263 LTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
P + V+S K+ G +++ I + D+ G VIG+AG + EI Q+SGA I
Sbjct: 217 NKP-------NTPVRSPDKNDGQEYL--TIAIADEHIGAVIGRAGRSINEITQVSGACIR 267
Query: 323 IHTG----TESHKKMFHIQGCQEAVSLAQYLI 350
I ++ + I G EA+ A+ +I
Sbjct: 268 ISAKGDFIADTCDREVVISGTPEAIQAAEAMI 299
>gi|146416151|ref|XP_001484045.1| hypothetical protein PGUG_03426 [Meyerozyma guilliermondii ATCC
6260]
Length = 342
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 141/360 (39%), Gaps = 80/360 (22%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVTVSGSVD 71
LI R L V+ E CLIG G ++ +R+E+ K IS +RI+TVSG++D
Sbjct: 59 LINYRVL----VSAKEAGCLIGQNGQVIDSIRQETNTKAGISRLQPGSHERILTVSGTLD 114
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC-SPQPLQLKLVI 130
+++ + Y L + + T F + L + C + L+L+I
Sbjct: 115 DAARA---LSYFAQALCNANTETFSTYSYFPLKQLS--------LTPCVEGETTILRLLI 163
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
P G+LIG G +I+ I+ ++ + LP S ER+V + G + + + I
Sbjct: 164 PNAQMGTLIGSKGVRIQQIQANFHISMIASKSFLPGSNERLVELQGTVNDLYDTLRVISR 223
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
LIE +V + Y P+ GG G ++ P
Sbjct: 224 CLIEDFSSIVTTSY--YIPR----------GGNTTKYRG---------TDRRSSLP---- 258
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRL 310
GI +T P EIV G +IGK GSR+
Sbjct: 259 ------GISTTLYFP------------------------NEIV------GALIGKNGSRI 282
Query: 311 LEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPE 369
+R++SGA I I + ++ F I G AV A+ L+ +E ++ ++ E
Sbjct: 283 QGVRKVSGASIGISEEVDGKTEREFTISGSSHAVEKAKDLLYHNLEREEQRRAEAANTAE 342
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 41/339 (12%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
KI+ D L+ R L ++ + +IG G ++ +R + AKI + D C R++T
Sbjct: 337 KINRDELVVYRIL----CPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVIT 392
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED----YHINRNRMENCSP 121
+ SV T L D + Y+ + S E+ +++R+ + C
Sbjct: 393 IYCSVKEKQEEIGFTKSENEPLCCAQ-DALLKVYDAIVASDEENNTKTNVDRDDNKEC-- 449
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-------MLPMSTERIVTV 174
+L++P + SLIGK G IK IR + A+V+V S + M + +V +
Sbjct: 450 -----RLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVI 504
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN--AGPVILS---GGQAYTLHG 229
G P+++ QA++ + ++ ++ IP + + + A VI+ Y G
Sbjct: 505 SGEPESVKQALFAVSAIM----YKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTG 560
Query: 230 EYAVP---VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GGKDTGD 285
Y+ +Q+ AG P L+V +G T+ P + A S GG +
Sbjct: 561 FYSNQDHILQQGAG--VPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSE 618
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
+ V + +I VIGK GS + IR+ SG+ I ++
Sbjct: 619 ELVFKVLCPLCNIMR-VIGKGGSTIKRIREASGSCIEVN 656
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 19/199 (9%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVT 90
+IG GG ++R+R+ SG+ I + D C D + + + T + +++
Sbjct: 634 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATEILFCCLSTPF----VFMQ 689
Query: 91 SVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIR 150
S D++ + L++Y IN EN ++++L++ + G +IGK G I +IR
Sbjct: 690 SPDDMKSMAVEAVLLLQEY-INDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVINEIR 743
Query: 151 DLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPK 210
+ AN+ ++ + +V V G ++ A+ QI L L E L K +V +P
Sbjct: 744 KRTNANICISKG----KKDDLVEVSGEVSSVRDALIQIVLRLREDVLG-DKDSVATRKPP 798
Query: 211 TMNAGPVILSGGQ--AYTL 227
LSG YTL
Sbjct: 799 ARTDNCSFLSGSSNAGYTL 817
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQE 341
D + V+ +++++ + GCVIGK+GS + EIR+ + A I I G KK ++ E
Sbjct: 711 DEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKG----KKDDLVEVSGE 766
Query: 342 AVSLAQYLINMCIELQKN---NTTNTSDNPEPADLDAAISAFMTASVNS 387
S+ LI + + L+++ + + + PA D +F++ S N+
Sbjct: 767 VSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNC--SFLSGSSNA 813
>gi|387018122|gb|AFJ51179.1| Heterogeneous nuclear ribonucleoprotein K-like [Crotalus
adamanteus]
Length = 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P S++R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSSDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 185 LI--SESPIKGRAQPYDP 200
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 264 TPAALAALSGSRVK-SGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
TP SG +GG+ D G + T++ + D+AG +IGK G R+ +IR SG
Sbjct: 321 TPEMFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESG 380
Query: 319 AQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
A I I E S ++ I G Q+ + AQYL+ ++
Sbjct: 381 ASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 418
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 89 VTSVDNVCTAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
V++ D++ T F S DY R + + ++ IP GS+IGKGG +I
Sbjct: 313 VSACDDIETPEMFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRI 372
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
K IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 373 KQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 411
>gi|327263405|ref|XP_003216510.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Anolis
carolinensis]
Length = 425
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P S++R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSSDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 185 LI--SESPIKGRAQPYDP 200
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 264 TPAALAALSGSRVK-SGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISG 318
TP SG +GG+ D G + T++ + D+AG +IGK G R+ +IR SG
Sbjct: 321 TPEMFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESG 380
Query: 319 AQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
A I I E S ++ I G Q+ + AQYL+ ++
Sbjct: 381 ASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 418
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 353 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 411
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 95/346 (27%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 18 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 56
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 57 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 116
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 117 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE-- 174
Query: 197 LQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE 256
+P++ + L+ YA VAG P+A
Sbjct: 175 -----------DPQSSSC------------LNISYA----NVAG-----PVANS------ 196
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
T LT LAA S + EI + +++ G ++GK G L+E +++
Sbjct: 197 --NPTGLTAEKLAAESAKEL-------------VEIAVPENLVGAILGKGGKTLVEYQEL 241
Query: 317 SGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+GA+I I E + + I G A AQYLI+ + ++
Sbjct: 242 TGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQ 287
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 65
>gi|71897277|ref|NP_001026556.1| heterogeneous nuclear ribonucleoprotein K [Gallus gallus]
gi|75571241|sp|Q5ZIQ3.1|HNRPK_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|53135051|emb|CAG32390.1| hypothetical protein RCJMB04_24e23 [Gallus gallus]
Length = 427
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADTETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 185 LI--SESPIKGRAQPYDP 200
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 346 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 405
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 406 DQIQNAQYLLQNSVK 420
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 413
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 87/346 (25%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 46 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 84
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 144
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 145 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQE-- 202
Query: 197 LQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE 256
+P++ + L+ YA VAG P+A
Sbjct: 203 -----------DPQSSSC------------LNISYA----NVAG-----PVANSNPTAAA 230
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
G LT LAA S + EI + +++ G ++GK G L+E +++
Sbjct: 231 GAAGGFLTAEKLAAESAKEL-------------VEIAVPENLVGAILGKGGKTLVEYQEL 277
Query: 317 SGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+GA+I I E + + I G A AQYLI+ + ++
Sbjct: 278 TGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQ 323
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 93
>gi|440905354|gb|ELR55741.1| Heterogeneous nuclear ribonucleoprotein K [Bos grunniens mutus]
Length = 464
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +I SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIHHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK I SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIHHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 350 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 407
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 408 SEDRIITITGTQDQIQNAQYLLQNSVK 434
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 369 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 427
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 34/345 (9%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ + +IG GG IV+ L+ E+GA IS+ C +R++T++ S + S S
Sbjct: 245 DRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYS-------- 296
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ + V +N RS+E I + P+ +LV+P+ G L+GKGG
Sbjct: 297 ----PAQNGVILVFN---RSIE-AGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTI 348
Query: 146 IKDIRDLSGANVQ-VASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL--QV 199
I ++R SGA ++ + SD +P +++V + G + +Y I L + +
Sbjct: 349 ISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT 408
Query: 200 VKGAVIPYEPKTMNAGPV-ILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL-GIEG 257
+ GA I P + ++ LH V + L + ++
Sbjct: 409 LNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDH 468
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDF-------VETEIVLTDDIAGCVIGKAGSRL 310
S L P+ R GG + G EIV+ +++ G V G+ G+ L
Sbjct: 469 PTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNL 528
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+R+ISGA++ +H + ++ I G + AQ L+ I
Sbjct: 529 ARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 573
>gi|77736071|ref|NP_001029734.1| heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|426219903|ref|XP_004004157.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Ovis aries]
gi|426219905|ref|XP_004004158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ovis aries]
gi|426224282|ref|XP_004006301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
gi|426256846|ref|XP_004022048.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Ovis aries]
gi|108860777|sp|Q3T0D0.1|HNRPK_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|74354615|gb|AAI02451.1| Heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|296484523|tpg|DAA26638.1| TPA: heterogeneous nuclear ribonucleoprotein K [Bos taurus]
Length = 464
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|313151207|ref|NP_998159.2| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 429
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++VS
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNATVSVPDSSGPERILSVS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ V + +LE+Y ++ +C +L+L+I
Sbjct: 92 ------------------ADIPTVAEILLKIIPTLEEYQHHKGVDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++RD + +++ + P ST+R+V V G + + Q I + +
Sbjct: 129 QSLAGSIIGLKGAKIKELRDSTQTTIKLFQECCPQSTDRVVLVGGKAERVVQCIKTMLEL 188
Query: 192 LIECTLQVVKGAVIPYEP 209
++E +KG Y+P
Sbjct: 189 IVEAP---IKGRAQQYDP 203
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 274 SRVKSGGKDTGDD--FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
S +SGG+ + D + T++ + D+AG +IGK G R+ +IR SGA I I + S
Sbjct: 338 SSYQSGGRSSYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLQGSE 397
Query: 331 KKMFHIQGCQEAVSLAQYLI 350
++ I G Q+ + AQYL+
Sbjct: 398 DRIITITGTQDQIQNAQYLL 417
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 357 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLQGSEDRIITITGTQDQIQNAQY 415
>gi|32451938|gb|AAH54653.1| Heterogeneous nuclear ribonucleoprotein K [Danio rerio]
gi|182890942|gb|AAI65841.1| Hnrnpk protein [Danio rerio]
Length = 420
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++VS
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKDIKALRTDYNATVSVPDSSGPERILSVS---- 91
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ V + +LE+Y ++ +C +L+L+I
Sbjct: 92 ------------------ADIPTVAEILLKIIPTLEEYQHHKGVDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++RD + +++ + P ST+R+V V G + + Q I + +
Sbjct: 129 QSLAGSIIGLKGAKIKELRDSTQTTIKLFQECCPQSTDRVVLVGGKAERVVQCIKTMLEL 188
Query: 192 LIECTLQVVKGAVIPYEP 209
++E +KG Y+P
Sbjct: 189 IVEAP---IKGRAQQYDP 203
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A+Y
Sbjct: 345 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLQGSEDRIITITGTQDQIQNALY 403
Query: 187 QICLVLIECTLQVV 200
Q V C+L +V
Sbjct: 404 QPPTV---CSLILV 414
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 279 GGKDTGDD--FVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
GG+ + D + T++ + D+AG +IGK G R+ +IR SGA I I + S ++
Sbjct: 331 GGRSSYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLQGSEDRIIT 390
Query: 336 IQGCQEAVSLAQY 348
I G Q+ + A Y
Sbjct: 391 ITGTQDQIQNALY 403
>gi|426256848|ref|XP_004022049.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Ovis aries]
Length = 466
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Query: 187 QICLVLIECTLQVVK 201
L++ +++ VK
Sbjct: 450 -----LLQNSVKHVK 459
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 145/345 (42%), Gaps = 34/345 (9%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ + +IG GG IV+ L+ E+GA IS+ C +R++T++ S + S
Sbjct: 308 DRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESR---------- 357
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ + + V +N RS+E I + P+ +LV+P+ G L+GKGG
Sbjct: 358 --YSPAQNGVILVFN---RSIE-AGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTI 411
Query: 146 IKDIRDLSGANVQ-VASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL--QV 199
I ++R SGA ++ + SD +P +++V + G + +Y I L + +
Sbjct: 412 ISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPSKT 471
Query: 200 VKGAVIPYEPKTMNAGPV-ILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL-GIEG 257
+ GA I P + ++ LH V + L + ++
Sbjct: 472 LNGAGIRSSSAMNEISPYGRVRDPASFGLHSSVGVSPSFSRHTTLTQSMDHLGLSHSLDH 531
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDF-------VETEIVLTDDIAGCVIGKAGSRL 310
S L P+ R GG + G EIV+ +++ G V G+ G+ L
Sbjct: 532 PTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNL 591
Query: 311 LEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
+R+ISGA++ +H + ++ I G + AQ L+ I
Sbjct: 592 ARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQAAQSLLQAFI 636
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 85/339 (25%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--------------ACP 60
+ R L H+S I +IG G IV++L+ ++GA+I + D A
Sbjct: 51 VAFRLLCHAS----RIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASV 106
Query: 61 DRIVTVSGSVDNSSTSSVETGYPG---HTLWVTSV-DNVCTAYNFMCRSLEDYHINRNRM 116
+R + + GS + S+ + L V +V D V CR L +
Sbjct: 107 NRRIALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAE-------- 158
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPM---STERIV 172
+ GS+IGKGG ++ IR SG+ ++V ++ LP ST+ +V
Sbjct: 159 ---------------TSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMV 203
Query: 173 TVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYA 232
+ G+ + +A+ + L +C P KT L GG+
Sbjct: 204 EIEGDVLAVKKALVAVSRRLQDC----------PNVDKTK------LIGGR--------- 238
Query: 233 VPVQEVAGKKQPHPLAGL-----AVLGIEGIGSTSLTPAALA---ALSGSRVKSGGKDTG 284
P++ V + P P L +VL I S +++ A+ + +++ R+ + T
Sbjct: 239 -PLEVVPQQSLPDPRVDLFQQRGSVL--PPIPSNTISYASGSRPLSINTERISTLDPKTS 295
Query: 285 DDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
V +I+ ++D G VIGK G+ + ++ +GA I++
Sbjct: 296 QQEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISV 334
>gi|392513715|ref|NP_001254774.1| heterogeneous nuclear ribonucleoprotein K [Sus scrofa]
Length = 463
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 140/340 (41%), Gaps = 45/340 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
++I +IG GG ++ +RKESGA I + D A DR ++ +T V++
Sbjct: 322 DKIGLVIGKGGMTIKSIRKESGANIDVDD-AKNDREESIITVTSTEATDDVKSA------ 374
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+V+ V + +ED + ++L++P G LIGKGG +
Sbjct: 375 ---AVEAVLLLQAKINDGIEDR--------------MHIRLLVPGNVIGCLIGKGGSIVN 417
Query: 148 DIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
D+R+ S A + ++ P S++ +V V G D + A+ QI L L E L+
Sbjct: 418 DMRNKSKAIIHISKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVLK----DS 473
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA---------GLAVLGI 255
+ + + I Y+ +++P + +Q PL+ GL V
Sbjct: 474 VERQNSDKDGKRTIAITEPMYS--SNFSMPAL-LPSTRQVSPLSYDQRGEVERGLDVYPR 530
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
S A G+ K G + E+++ VIGK G+ L IR+
Sbjct: 531 SSSYRYSSLQAVDDGY-GAHSSYTSKSYGGRRPDIEMIIPASGLSKVIGKRGTNLDNIRK 589
Query: 316 ISGAQIN-IHTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
ISGA I I + + H + HI G E A+ LI I
Sbjct: 590 ISGADIEIIESKSSRHDHVAHISGTPEQRQSAENLIRAFI 629
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 135/336 (40%), Gaps = 47/336 (13%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGS 69
D L+ R L V I +IG G ++ +R+++ AK+ + D R++ V
Sbjct: 36 DELVVYRILCPDKV----IGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCH 91
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRS----LEDYHINRNRMENCSPQPLQ 125
V + T + VC A N + + +E IN + + +
Sbjct: 92 VHHRDL----THRDIDVDDDDDREPVCAAQNALLKVHDAIVEALAINSDSDDE------E 141
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-------ASDMLPMSTERIVTVHGNP 178
+++PA+ S+IGK G IK +R +S ++++V + MS + V + G+
Sbjct: 142 ANILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDA 201
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP--VILSGGQAYTLHGEYAV--- 233
+ +A++ + ++ + + +IP E P +I S Y Y++
Sbjct: 202 RAVKKALFAVSAIIYKSPSK----EIIPLETSVQELPPSIIIPSELPVYPASNFYSLSDG 257
Query: 234 ------PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
P + G PH ++ + + L P + + S K +GD
Sbjct: 258 AMPSGHPSLPILG--APHHVSRIPEFTVPADAHGRL-PIYQSMVPAIPTYSTPKGSGDLL 314
Query: 288 VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ +V D G VIGK G + IR+ SGA I++
Sbjct: 315 L--RVVCPGDKIGLVIGKGGMTIKSIRKESGANIDV 348
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV---HGNPDT 180
L L++V P G +IGKGG IK IR SGAN+ V D E I+TV D
Sbjct: 313 LLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDV-DDAKNDREESIITVTSTEATDDV 371
Query: 181 ISQAIYQICLV 191
S A+ + L+
Sbjct: 372 KSAAVEAVLLL 382
>gi|432109005|gb|ELK33475.1| Heterogeneous nuclear ribonucleoprotein K [Myotis davidii]
Length = 438
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
V D +AG +IGK G R+ +IR SGA I I E S ++ I G Q+ + AQYL+
Sbjct: 367 VALDMLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ 426
Query: 352 MCIE 355
++
Sbjct: 427 NSVK 430
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 373 AGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 423
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 138/330 (41%), Gaps = 39/330 (11%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGS 69
D LI R L V I +IG G ++ +R+E+ AK+ + D DR++T+
Sbjct: 34 DELIVYRILCPDEV----IGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCY 89
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE---DYHINRNRMENCSPQPLQL 126
V ++ + G + D + + + S+ D R + C
Sbjct: 90 VKEKEDVEIDDEFAGKEPLCAAQDALLKVHVAIANSIAAIGDSEKKRKDRDEC------- 142
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDML------PMSTERIVTVHGNPD 179
++++P++ ++IGK G IK +R + AN++V A D M + V + G +
Sbjct: 143 QILVPSSQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESE 202
Query: 180 TISQAIYQICLVLIECTLQ--VVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQE 237
+ +A++ + ++ + + + +P P ++ +I S Y G Y
Sbjct: 203 AVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSI----IIPSDVPVYPPGGLYPASDPI 258
Query: 238 VAGKKQPHPLAGLAVLGIEGIG----STSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
V + P + V ++G S + +AL +SG G ++ + +
Sbjct: 259 VTPRAVPQIIGATNVPDLQGYADAGNSWPMYSSALPVVSGV-----GASRSEELIIRMLC 313
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+D I G VIGK GS + +RQ SGA I +
Sbjct: 314 PSDKI-GRVIGKGGSTIKSMRQASGAHIEV 342
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 146/362 (40%), Gaps = 62/362 (17%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSV 70
E+ +I M C ++I +IG GG ++ +R+ SGA I + D
Sbjct: 305 EELIIRMLC------PSDKIGRVIGKGGSTIKSMRQASGAHIEVDDS------------- 345
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
+ + + +T+ + + + ++E + + ++ + + ++L++
Sbjct: 346 --------KANFDECLIIITTTE---SPSDLKSMAVEAVLLMQGKINDEDDTTVSIRLLV 394
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQ 187
P+ G +IGK G I +IR + A+V+++ P + + +V V G+ D + A+ Q
Sbjct: 395 PSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVGGSVDCVRDALIQ 454
Query: 188 ICLVLIECTLQ--------------VVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAV 233
I L L + L+ + G+ P M++ P + + Y E
Sbjct: 455 IILRLRDDVLRERDTGHNPSIGAESLYPGSAGLSLPSMMHSVPPV-AAPMVYDHRAESGA 513
Query: 234 PVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+ ++ P+ G +G G GS S L GG +++
Sbjct: 514 GLGMLS-PSSPYGGYGSLPMGDNGYGSMSSYATKL---------YGGLPPPSTL---DML 560
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINM 352
+ + G V+GK G+ + IR+ISGA I I + ++ I G E A+ LI
Sbjct: 561 IPANAVGKVLGKGGANIANIRKISGASIEISDNKSARGDRIALISGTPEQKRAAENLIQA 620
Query: 353 CI 354
I
Sbjct: 621 FI 622
>gi|380812326|gb|AFE78037.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
Length = 459
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 377 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 436
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 437 DQIQNAQYLLQNSVK 451
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 386 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 444
>gi|119583083|gb|EAW62679.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_e [Homo
sapiens]
Length = 464
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
+ + +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 369 SYYSYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEP 426
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ ++
Sbjct: 427 LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
V S D + S+++T P W + + +++ Y R + +
Sbjct: 337 VGFSADETWDSAIDTWSPSE--WQMAYEPQVEYHSYYS-----YAGGRGSYGDLGGPIIT 389
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A
Sbjct: 390 TQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 186 Y 186
Y
Sbjct: 449 Y 449
>gi|334333295|ref|XP_003341704.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
Length = 470
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHI--NRNRMENCSPQP 123
V S D + S+++T P W + + + F S DY R +
Sbjct: 337 VGFSADETWDSAIDTWSPSE--WQMAYEPQVEYHEFTGGSGYDYSYAGGRGSYGDLGGPI 394
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I
Sbjct: 395 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQN 453
Query: 184 AIY 186
A Y
Sbjct: 454 AQY 456
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 379 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 436
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 437 SEDRIITITGTQDQIQNAQYLLQNSVK 463
>gi|345329393|ref|XP_001506808.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ornithorhynchus anatinus]
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|119583080|gb|EAW62676.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Homo
sapiens]
Length = 462
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 371 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 428
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 429 SEDRIITITGTQDQIQNAQYLLQNSVK 455
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 9/121 (7%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
V S D + S+++T P W + + +N+ Y R + +
Sbjct: 337 VGFSADETWDSAIDTWSPSE--WQMAYEPQVEYHNY------SYAGGRGSYGDLGGPIIT 388
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A
Sbjct: 389 TQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQ 447
Query: 186 Y 186
Y
Sbjct: 448 Y 448
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++V+ S+D
Sbjct: 41 DEMVELRVLLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASID 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
T+ + + T + S D+ +C +L+L+I
Sbjct: 97 --------------TIGEILLKIIPTLEEYQHYSGIDF--------DC-----ELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V V G P+ + + I I +
Sbjct: 130 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVVECIKVILEL 189
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E +KG PY+P
Sbjct: 190 VSEAP---IKGRAQPYDP 204
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 272 SGSRVKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
S +SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 334 SWDHFQSGGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPL 393
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ +
Sbjct: 394 EGSEDRIITITGTQDQIQNAQYLLQNSVR 422
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 357 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 415
>gi|126330639|ref|XP_001363707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
gi|395515329|ref|XP_003761858.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Sarcophilus
harrisii]
Length = 471
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHI--NRNRMENCSPQP 123
V S D + S+++T P W + + + F S DY R +
Sbjct: 337 VGFSADETWDSAIDTWSPSE--WQMAYEPQVEYHEFTGGSGYDYSYAGGRGSYGDLGGPI 394
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I
Sbjct: 395 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQN 453
Query: 184 AIY 186
A Y
Sbjct: 454 AQY 456
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 379 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 436
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 437 SEDRIITITGTQDQIQNAQYLLQNSVK 463
>gi|61369343|gb|AAX43320.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
Length = 465
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|354500000|ref|XP_003512091.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Cricetulus griseus]
Length = 463
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|74177637|dbj|BAE38921.1| unnamed protein product [Mus musculus]
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLKSDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|354499998|ref|XP_003512090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Cricetulus griseus]
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens]
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|281337729|gb|EFB13313.1| hypothetical protein PANDA_003005 [Ailuropoda melanoleuca]
Length = 453
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLIN 351
S ++ I G Q+ + AQYL+
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQ 452
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 10/122 (8%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVD-NVCTAYNFMCRSLEDYHINRNRMENCSPQPL 124
V S D + S++ET P W + + + Y++ Y R + +
Sbjct: 337 VGFSADETWDSAIETWSPSE--WQMAYEPQGGSGYDY------SYAGGRGSYGDLGGPII 388
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A
Sbjct: 389 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNA 447
Query: 185 IY 186
Y
Sbjct: 448 QY 449
>gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|14165439|ref|NP_002131.2| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197101649|ref|NP_001126766.1| heterogeneous nuclear ribonucleoprotein K [Pongo abelii]
gi|388454448|ref|NP_001253875.1| heterogeneous nuclear ribonucleoprotein K [Macaca mulatta]
gi|114625208|ref|XP_001155079.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 18
[Pan troglodytes]
gi|114625210|ref|XP_001155315.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 22
[Pan troglodytes]
gi|149758457|ref|XP_001489114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Equus caballus]
gi|296189573|ref|XP_002742828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Callithrix jacchus]
gi|296189575|ref|XP_002742829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Callithrix jacchus]
gi|296189579|ref|XP_002742831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Callithrix jacchus]
gi|301758414|ref|XP_002915066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Ailuropoda melanoleuca]
gi|332236647|ref|XP_003267511.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Nomascus leucogenys]
gi|332236651|ref|XP_003267513.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Nomascus leucogenys]
gi|344272026|ref|XP_003407837.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Loxodonta africana]
gi|395819298|ref|XP_003783031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Otolemur
garnettii]
gi|397475599|ref|XP_003809221.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1 [Pan
paniscus]
gi|397475603|ref|XP_003809223.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3 [Pan
paniscus]
gi|397475609|ref|XP_003809226.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6 [Pan
paniscus]
gi|402897753|ref|XP_003911909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Papio anubis]
gi|402897755|ref|XP_003911910.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Papio anubis]
gi|402897761|ref|XP_003911913.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Papio anubis]
gi|403300938|ref|XP_003941169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Saimiri boliviensis boliviensis]
gi|403300942|ref|XP_003941171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Saimiri boliviensis boliviensis]
gi|403300944|ref|XP_003941172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Saimiri boliviensis boliviensis]
gi|410978211|ref|XP_003995489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Felis catus]
gi|410978213|ref|XP_003995490.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Felis catus]
gi|426362129|ref|XP_004048233.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Gorilla gorilla gorilla]
gi|426362131|ref|XP_004048234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Gorilla gorilla gorilla]
gi|75056718|sp|Q5R5H8.1|HNRPK_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|75075750|sp|Q4R4M6.1|HNRPK_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|12653175|gb|AAH00355.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|13879427|gb|AAH06694.1| Hnrpk protein [Mus musculus]
gi|26347481|dbj|BAC37389.1| unnamed protein product [Mus musculus]
gi|38197650|gb|AAH61867.1| Hnrpk protein [Rattus norvegicus]
gi|48145659|emb|CAG33052.1| HNRPK [Homo sapiens]
gi|55732576|emb|CAH92988.1| hypothetical protein [Pongo abelii]
gi|58475965|gb|AAH89328.1| Hnrpk protein [Mus musculus]
gi|61359196|gb|AAX41682.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|67971214|dbj|BAE01949.1| unnamed protein product [Macaca fascicularis]
gi|74139420|dbj|BAE40851.1| unnamed protein product [Mus musculus]
gi|74141211|dbj|BAE35915.1| unnamed protein product [Mus musculus]
gi|74178242|dbj|BAE29905.1| unnamed protein product [Mus musculus]
gi|74183280|dbj|BAE22563.1| unnamed protein product [Mus musculus]
gi|74185026|dbj|BAE39121.1| unnamed protein product [Mus musculus]
gi|119583081|gb|EAW62677.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_c [Homo
sapiens]
gi|123979648|gb|ABM81653.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|123994453|gb|ABM84828.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|158256108|dbj|BAF84025.1| unnamed protein product [Homo sapiens]
gi|197692227|dbj|BAG70077.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197692481|dbj|BAG70204.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|351696771|gb|EHA99689.1| Heterogeneous nuclear ribonucleoprotein K [Heterocephalus glaber]
gi|380812328|gb|AFE78038.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|380812330|gb|AFE78039.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|410337439|gb|JAA37666.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401379|gb|JAA47578.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 150/372 (40%), Gaps = 74/372 (19%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V+ ++ LIG G ++R+ ES A+I I DG P+R V +S + +
Sbjct: 119 ESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDA- 177
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHC 135
L ++D + +N + L D ++ + P +L++PA+
Sbjct: 178 -----------LVPPAIDVLLRVHNRITDGL-DSETDQAQKGASPAGPT--RLLVPASQA 223
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQIC---- 189
GSLIGK G IK I+D S +++ ++ P ++ +R+V + G P + +A+ I
Sbjct: 224 GSLIGKQGTTIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLR 283
Query: 190 --------LVLIECTLQVVKGAVIPYEPKTMN-------------------AGPVILSGG 222
L L E ++V P E + M +GP GG
Sbjct: 284 KFLVDRSVLPLFEMQMKVHSA---PRE-QPMPAPQQWGPPPPWSHPPNIPPSGPGY--GG 337
Query: 223 QAYTL----HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS 278
+ + Y P +KQPH GI G + P A A SG++ S
Sbjct: 338 NPHFMPPRPQDSYYPPPNVHHVEKQPH-------YGISSYGRDA-NPTA-APTSGNQHLS 388
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQG 338
G ++ + D VIG AG+ + IR+ SGA I+I G + I G
Sbjct: 389 HGSSQLSQKMQVPLSYAD----AVIGSAGANISYIRKHSGATISIQEGVPG-EMTVEIAG 443
Query: 339 CQEAVSLAQYLI 350
V AQ LI
Sbjct: 444 SASQVQTAQQLI 455
>gi|149039794|gb|EDL93910.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Rattus
norvegicus]
Length = 386
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
>gi|119583082|gb|EAW62678.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
gi|119583085|gb|EAW62681.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
Length = 463
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
+ + +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 369 SYYSYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEP 426
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ ++
Sbjct: 427 LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 8/121 (6%)
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
V S D + S+++T P W + + +++ Y R + +
Sbjct: 337 VGFSADETWDSAIDTWSPSE--WQMAYEPQVEYHSYYS-----YAGGRGSYGDLGGPIIT 389
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A
Sbjct: 390 TQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQ 448
Query: 186 Y 186
Y
Sbjct: 449 Y 449
>gi|59381084|gb|AAW84289.1| heterogeneous nuclear ribonucleoprotein K transcript variant [Homo
sapiens]
Length = 464
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISTDIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|154794959|gb|ABS86515.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154794965|gb|ABS86518.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
gi|154794968|gb|ABS86519.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 270
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 53 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 112
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 113 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 170
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 171 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 230
Query: 300 ----GCVIGKAGSRLLEIRQISGAQINI 323
GC+IGK G+++ EIR++SG++I+I
Sbjct: 231 ADMVGCIIGKGGAKINEIRRMSGSRISI 258
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 107 EDYHINRNRMENCSPQPLQLKLV------IPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
E+ H +R +P P+ +L+ IPA G +IGKGG KI +IR +SG+ + +A
Sbjct: 200 ENGHRSRENSLASAPAPVADRLLRTQNISIPADMVGCIIGKGGAKINEIRRMSGSRISIA 259
>gi|74144445|dbj|BAE36070.1| unnamed protein product [Mus musculus]
Length = 463
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGSSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|74195705|dbj|BAE39657.1| unnamed protein product [Mus musculus]
Length = 463
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +I K G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIVKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+I KGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIVKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|13384620|ref|NP_079555.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
gi|14165435|ref|NP_112552.1| heterogeneous nuclear ribonucleoprotein K isoform b [Homo sapiens]
gi|16923998|ref|NP_476482.1| heterogeneous nuclear ribonucleoprotein K [Rattus norvegicus]
gi|114625188|ref|XP_001155028.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 17
[Pan troglodytes]
gi|114625190|ref|XP_001155252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 21
[Pan troglodytes]
gi|126334813|ref|XP_001368466.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Monodelphis domestica]
gi|296189583|ref|XP_002742833.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Callithrix jacchus]
gi|332236649|ref|XP_003267512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Nomascus leucogenys]
gi|332236653|ref|XP_003267514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Nomascus leucogenys]
gi|338719650|ref|XP_003364038.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475601|ref|XP_003809222.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2 [Pan
paniscus]
gi|397475605|ref|XP_003809224.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4 [Pan
paniscus]
gi|402897757|ref|XP_003911911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Papio anubis]
gi|402897759|ref|XP_003911912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Papio anubis]
gi|403300940|ref|XP_003941170.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Saimiri boliviensis boliviensis]
gi|410978215|ref|XP_003995491.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Felis catus]
gi|410978217|ref|XP_003995492.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Felis catus]
gi|426362133|ref|XP_004048235.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Gorilla gorilla gorilla]
gi|426362135|ref|XP_004048236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Gorilla gorilla gorilla]
gi|48429097|sp|P61980.1|HNRPK_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=dC stretch-binding protein;
Short=CSBP
gi|48429103|sp|P61978.1|HNRPK_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=Transformation up-regulated
nuclear protein; Short=TUNP
gi|48429104|sp|P61979.1|HNRPK_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|241478|gb|AAB20770.1| heterogeneous nuclear ribonucleoprotein complex K [Homo sapiens]
gi|409389|dbj|BAA04566.1| dC-stretch binding protein [Rattus norvegicus]
gi|12847547|dbj|BAB27614.1| unnamed protein product [Mus musculus]
gi|15929044|gb|AAH14980.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|119583079|gb|EAW62675.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Homo
sapiens]
gi|148709316|gb|EDL41262.1| mCG6893, isoform CRA_a [Mus musculus]
gi|149039793|gb|EDL93909.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Rattus
norvegicus]
gi|380812324|gb|AFE78036.1| heterogeneous nuclear ribonucleoprotein K isoform b [Macaca
mulatta]
gi|410337441|gb|JAA37667.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401355|gb|JAA47567.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 463
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 151/360 (41%), Gaps = 57/360 (15%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSG 68
E+ ++ M C ++I LIG GG ++R+R+ SGA+I + D + ++T++
Sbjct: 310 EELIVRMLC------PSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITA 363
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
+ S SV ++E + + ++ + P+ ++L
Sbjct: 364 TESTSDLKSV--------------------------AVEAVLLLQEKINDEDDAPVSIRL 397
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAI 185
++P+ G +IG+ G I +IR + A++Q++ P + +V V G D + A+
Sbjct: 398 LVPSKVIGCIIGRSGAIINEIRKRTKADIQISRSNKPKYADDNDELVEVVGEVDCVRDAL 457
Query: 186 YQICLVLIECTLQVVK-------GAVIPYEPKTMNAGPVILSG--GQAYTLHGEYAVPVQ 236
QI L L E L+ G+ Y ++ + P +LS A L +
Sbjct: 458 IQIVLRLREDVLKNKDIDHNRHIGSESLYASSSVLSAPPMLSSIPATAPALAYDQRTGSG 517
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTD 296
G G +E G S++ A G R+ E+V+
Sbjct: 518 TGLGMHSSRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPP--------LSTLEMVVPA 569
Query: 297 DIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK--KMFHIQGCQEAVSLAQYLINMCI 354
+ G V+GK G+ L IR+ISGA + I + ++S++ ++ I G E A+ LI I
Sbjct: 570 NAVGKVMGKGGANLANIRKISGATVEI-SESKSYRGDRVALISGTSEEKRAAENLIQAFI 628
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/370 (21%), Positives = 151/370 (40%), Gaps = 32/370 (8%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPD 61
N + D+ LI R L + V I +IG G ++ +R+ES AK+ + D
Sbjct: 31 NDRDERDKGELIAYRILCPNEV----IGSVIGKNGKVINSIRQESRAKVKVVDPFPGAKH 86
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE---DYHINRNRMEN 118
R++T+ V N +E + + D + ++ + S+E D R +
Sbjct: 87 RVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDALIKVHSAISNSIETAGDSEKKRKNKDE 146
Query: 119 CSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASD---MLPMSTERI 171
C ++++P++ LIGK G IK +R + N++V A+D M +
Sbjct: 147 C-------QILVPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEHSCAMEFDNF 199
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQ--VVKGAVIPYEPKTMNAGPVILSGGQAYTLHG 229
V V G + + +A++ + ++ + + + + +P P ++ +I S Y G
Sbjct: 200 VLV-GESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPHSI----IIPSELPIYPPGG 254
Query: 230 EYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
Y V + P + + + G + + L + V S G ++ +
Sbjct: 255 LYPASDPIVQPRSFPQLIGATTMQDLHGGYADTGNTWPLYSSPLPVVSSLGASQSEELIV 314
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKK-MFHIQGCQEAVSLAQY 348
+ +D I G +IGK G + +RQ SGA+I + H + + I + L
Sbjct: 315 RMLCPSDKI-GQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITITATESTSDLKSV 373
Query: 349 LINMCIELQK 358
+ + LQ+
Sbjct: 374 AVEAVLLLQE 383
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 136/340 (40%), Gaps = 63/340 (18%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+I +IG G +++LR E+GA I I D DR V +S + S
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGS------------ 560
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ----------PLQLKLVIPATHCG 136
D C LE I + +P P +L+I + G
Sbjct: 561 ------DRTCAELAL----LEVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAG 610
Query: 137 SLIGKGGCKIKDIRDLSGANVQV-ASDMLPM-----STERIVTVHGNPDTISQAIYQICL 190
SLIGK G IK+IR S A+V+V SD LP+ T+R+V + G + AI +
Sbjct: 611 SLIGKAGANIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAA 670
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSG--GQAYTL-HGEYAV-----PVQEVAGKK 242
L + + +P P+ A + + G GQ L H A P
Sbjct: 671 NLRDNPPK----ETVPTTPEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGL 726
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
QPHPLAG A G G + P L A +R+ V E+ + + G +
Sbjct: 727 QPHPLAGPAYAG----GVLAQAP-PLYANPAARLPPMLPK-----VSAEMSVPSSVMGGL 776
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQE 341
IGK G + +R +SGA I ++ ES ++ +G QE
Sbjct: 777 IGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQE 816
>gi|148709317|gb|EDL41263.1| mCG6893, isoform CRA_b [Mus musculus]
gi|148709318|gb|EDL41264.1| mCG6893, isoform CRA_b [Mus musculus]
Length = 368
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 72 ------NSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 158/376 (42%), Gaps = 60/376 (15%)
Query: 13 TLITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSG 68
L+ R + NV + + +IG GG + R++ ESG KI I G P+R ++G
Sbjct: 71 ALVHQRAVMTEEYNVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTG 130
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
+ + S+E L VD CR+ +H N M+ S ++
Sbjct: 131 TPE-----SIEQA---KRLLGQIVDR--------CRNGPGFH---NDMDGSS---TVQEI 168
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQ 187
+IPA+ G +IGKGG IK +++ +G + + D LP ++ + + G+P + QA
Sbjct: 169 LIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQARDL 228
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK 242
+ ++ E +G + + + G V +S G +GE +Q AG +
Sbjct: 229 VLEIIREKDQADFRGIRSDFSSR-IGGGSVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVR 287
Query: 243 -QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSG-SRVKSGGKDTGD- 285
Q P GL+ V+G+ I LT G S + G+ GD
Sbjct: 288 IQFKPDDGLSPERVAQVMGLPDRCQHAAHIINELILTAQERDGFGGLSLARGRGRSRGDW 347
Query: 286 ------DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMFH 335
E + D G VIGK G + I Q SGA + + T+ ++F
Sbjct: 348 NLSTPGSMQEINYTVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPAVRIFT 407
Query: 336 IQGCQEAVSLAQYLIN 351
I+G + + LA++LI+
Sbjct: 408 IRGVPQQIELARHLID 423
>gi|392353290|ref|XP_003751453.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++++ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELQENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I I +L E +KG PY+P
Sbjct: 203 VECIKIILDLLSESP---IKGXAQPYDP 227
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 272 SGSRVKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
SG +GG+ D G + T++ + D+AG +IGK G R+ +IR SGA I
Sbjct: 368 SGYDSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKTDEPL 427
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + QYL+ ++
Sbjct: 428 EGSEDRIITITGTQDQIQNTQYLLQNSVK 456
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA+++ + L S +RI+T+ G D I Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKT-DEPLEGSEDRIITITGTQDQIQNTQY 449
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 141/313 (45%), Gaps = 48/313 (15%)
Query: 20 LFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSS 77
+F V +I +IG GG IV++LR ++ AKI I D C +R+VT+ +SS
Sbjct: 45 VFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIH-------SSS 97
Query: 78 VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDY-HINRNRMENCSPQPLQLKLVIPATHCG 136
ET + + + D V A + + R + + E+ + KL++P+ G
Sbjct: 98 EETNH-----FDETDDLVSPAQDALFRVHQRVIAEDAREDEDEERNHVTAKLLVPSDQIG 152
Query: 137 SLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLVL 192
+IGKGG +++IR +GA +++ D LP +ST+ +V + G + +A++QI +
Sbjct: 153 CVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALFQIAAQI 212
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAV 252
+ P + + A V GG A G A P+ VA P A
Sbjct: 213 RDN----------PSRSQHLLASAV--PGGYATGGPGAGA-PIMGVA----PFVGAYGGY 255
Query: 253 LGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
G G S SL PA S +F + T +I G VIGK G+ + +
Sbjct: 256 KGDTGDWSRSLYPAPRDEASMR-----------EFSVRFVCPTGNIGG-VIGKGGAIINQ 303
Query: 313 IRQISGAQINIHT 325
IRQ SGA I + +
Sbjct: 304 IRQDSGATIKVDS 316
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 85/198 (42%), Gaps = 38/198 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPDR----IVTVSGSVDNSSTSSVETGYPGH 85
I +IG GG I+ ++R++SGA I + A I++ ++S + ++E
Sbjct: 290 IGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQ 349
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V+ +F R L++P + G LIGKGG
Sbjct: 350 PRCSEKVERDSGIVSFTTR-----------------------LLVPTSRIGCLIGKGGTI 386
Query: 146 IKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL---- 197
+ ++R L+ AN+++ S D LP + +V + G+ D A+ Q L + L
Sbjct: 387 VTEMRRLTKANIRILSKDNLPKIASEDDEMVQISGDLDVAKDALVQ-ALTRLRANLFDKE 445
Query: 198 QVVKG--AVIPYEPKTMN 213
+ V G V+PY P +++
Sbjct: 446 RAVSGFLPVLPYLPASVD 463
>gi|126723252|ref|NP_001075594.1| heterogeneous nuclear ribonucleoprotein K [Oryctolagus cuniculus]
gi|12230546|sp|O19049.1|HNRPK_RABIT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|2644968|emb|CAA05815.1| hnRNP-K protein [Oryctolagus cuniculus]
Length = 463
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|194753778|ref|XP_001959187.1| GF12183 [Drosophila ananassae]
gi|190620485|gb|EDV36009.1| GF12183 [Drosophila ananassae]
Length = 511
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRTEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + ++GA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IRGAIHNYDPMNFD 182
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 160/404 (39%), Gaps = 88/404 (21%)
Query: 9 IDEDTLITMRCLFHSSVNVNE-ISCLIGPGGCIVRRLRKESGAKISITDG-ACPDRIVTV 66
I+++ + M CL NE + +IG GG +R L+ ++GA + + D A D V V
Sbjct: 249 IEQEIVFRMICL-------NEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIV 301
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
+ +NS + + D V Y+ I+ M+ S P
Sbjct: 302 ISARENSEM-----------MHSPAQDAVLRVYS---------RISEASMDKSSAVPA-- 339
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPMSTER---IVTVHGNPDTIS 182
+L++P+ H G L+GKGG I ++R+++GA++++ ++ +P +R +V V GN +I
Sbjct: 340 RLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQ 399
Query: 183 QAIYQICLVLIECTLQV---VKGAVIPY--------EPKTMNAGPVILSGGQ-AYTLH-- 228
A+ I + + + G + PY P + P SGG Y +H
Sbjct: 400 DALLHITGRIRDVIIPPKPHPSGGMSPYPPAGSTPHHPSRQDPAPPHHSGGMPPYPMHPF 459
Query: 229 ------GEYAVPVQEVAGKKQPHPLAGLAVLGI---------------EGIGSTSLTPAA 267
G + V G+ HP+ + I E + P A
Sbjct: 460 RPNHPMGPFDVADHRPPGQHPAHPMEHMGADRIPYSYGCEQGGPRPFLEQPSPRTWAPEA 519
Query: 268 LAA---------------LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
A GS S + TE+V+ G + G GS L E
Sbjct: 520 QTADAPRSIPDKGLAMDSRKGSVAGSENQVATPTSTTTEVVIPCKYIGFICGTNGSDLAE 579
Query: 313 IRQISGAQINIHTGT--ESHKKMFHIQGCQEAVSLAQYLINMCI 354
I++ISGA I +H ++ +F + G E AQ LI+ I
Sbjct: 580 IQKISGAAITVHDPKPGDTDASVF-VCGDPEQTKKAQSLIHAFI 622
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 93/209 (44%), Gaps = 39/209 (18%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGA 58
D G+G+ +++ + C ++ ++ C++G GG V R+R+ESGA+I + D
Sbjct: 97 DDAGEGEEEKEVTGVVGCRMLAAGG--QVGCVLGKGGKTVERMRQESGAQIRVFRNKDQV 154
Query: 59 CP-----DRIVTVSGSV---------------DNS--STSSVETGY----PGHTLWVTSV 92
P D ++ +SGS DN TS+ TG PG +
Sbjct: 155 PPCALQGDELIHISGSFSAARKALLLVSTCLQDNPRLETSNFSTGRSFGPPGSGVGCPPG 214
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQP-------LQLKLVIPATHCGSLIGKGGCK 145
+ + +++ + DYH +P P + +++ G +IGKGG
Sbjct: 215 VDSHSQRSYLPPHIPDYHARNFSSNVAAPGPRFFIEQEIVFRMICLNEMVGGIIGKGGAT 274
Query: 146 IKDIRDLSGANVQVASDMLPMSTERIVTV 174
I+ ++ +GA+V+V D + S ER++ +
Sbjct: 275 IRALQSDTGASVKVI-DAVADSDERVIVI 302
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 19/136 (13%)
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI--------VLTDD 297
P+ VL + G + + + G RV GG D G+ E E+ +
Sbjct: 64 PVGDEVVLVVSGPDAPAAAVRVWERVVGHRV--GGDDAGEGEEEKEVTGVVGCRMLAAGG 121
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINIHTGTE-------SHKKMFHIQGCQEAVSLAQYLI 350
GCV+GK G + +RQ SGAQI + + ++ HI G A A L+
Sbjct: 122 QVGCVLGKGGKTVERMRQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLV 181
Query: 351 NMCIELQKNNTTNTSD 366
+ C LQ N TS+
Sbjct: 182 STC--LQDNPRLETSN 195
>gi|154794963|gb|ABS86517.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 270
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 53 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 112
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 113 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 170
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 171 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 230
Query: 300 ----GCVIGKAGSRLLEIRQISGAQINI 323
GC+IGK G+++ EIR++SG++I+I
Sbjct: 231 ADMVGCIIGKGGAQINEIRRMSGSRISI 258
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 107 EDYHINRNRMENCSPQPLQLKLV------IPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
E+ H +R +P P+ +L+ IPA G +IGKGG +I +IR +SG+ + +A
Sbjct: 200 ENGHRSRENSLASAPAPVADRLLRTQNISIPADMVGCIIGKGGAQINEIRRMSGSRISIA 259
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 168/373 (45%), Gaps = 58/373 (15%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G +++++ +E+ A+I + DGA PDR+V +SG + S
Sbjct: 81 CVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPL 140
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
S ++D V + + E+ + + CS ++L++ +T
Sbjct: 141 S------------PAMDAVIRVFKRVSGLSENE--DEAKASFCS-----IRLLVASTQAI 181
Query: 137 SLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVL 192
+LIGK G IK I++ +GA+V+V S D +P + ER+V + G + +A+ + L
Sbjct: 182 NLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHL 241
Query: 193 IECTLQVVKGAVIPYEPKTMNA-------------GPVILSGGQAYTLHGEYA--VPVQE 237
+ +V +V+P K+ N +L+ Q+ + EYA +
Sbjct: 242 RKF---LVDHSVLPLFEKSFNTPASQDRQTETWADKSSLLTASQSI-ISAEYAPSTKRES 297
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDD 297
+ ++ H + ++ GI G + P ++ G +SGG + T++ T
Sbjct: 298 LFLDREAHFDSHISSSGISLYGQDRVLPTIRSSGVG---RSGGP------IVTQVTQTMQ 348
Query: 298 I----AGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQGCQEAVSLAQYLINM 352
I A +IG G+ + IR+ SGA + I ++ I+G V +AQ LI
Sbjct: 349 IPLSYAEDIIGVGGTNIAFIRRNSGAILTIQESRGLPDEITVEIKGTSSQVQMAQQLIQE 408
Query: 353 CIELQKNNTTNTS 365
+ K T++S
Sbjct: 409 AVNAPKEPVTSSS 421
>gi|8699624|gb|AAF78762.1|AF275629_1 bancal protein [Drosophila melanogaster]
Length = 508
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 98/213 (46%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRSEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 135/346 (39%), Gaps = 75/346 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 46 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 84
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 144
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 145 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED- 203
Query: 197 LQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE 256
P +N + A PV P+ +
Sbjct: 204 ---------PQSSSCLNIS------------YANVAGPVANSNPTGSPYASPADVLPAAA 242
Query: 257 GIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQI 316
G LT LAA S + EI + +++ G ++GK G L+E +++
Sbjct: 243 GAAGGFLTAEKLAAESAKEL-------------VEIAVPENLVGAILGKGGKTLVEYQEL 289
Query: 317 SGAQINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+GA+I I E + + I G A AQYLI+ + ++
Sbjct: 290 TGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRVTYEQ 335
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 93
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 102/207 (49%), Gaps = 30/207 (14%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---D 61
GD D++T+ ++ + +I +IG GG I ++LR +S + I I++ A P +
Sbjct: 28 GDDPSDQNTITNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISE-AMPGYDE 86
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN--FMCRS---LEDYH----IN 112
RIVT+ +SS ET G T + VC A + FM ED +
Sbjct: 87 RIVTIY-------SSSEETNLFGET-----GEYVCPAQDALFMVHDRVIAEDLNNAAAEE 134
Query: 113 RNRMENCSP-QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMS 167
+N Q + +++++PA G +IGKGG I++IR + A +++ D L +S
Sbjct: 135 EEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQNIRSETCAQIRITKDDHLPPLALS 194
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIE 194
+ ++ +HG P + +A+YQ+ L E
Sbjct: 195 IDELLLIHGEPSAVRKALYQVATRLHE 221
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
DG D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 DGPQDQKRNRRNEDTVRILIPSSI----AGAVIGKGGQHIQKMRTQYKAAVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ +++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------ATLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQAQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|170572668|ref|XP_001892191.1| KH domain containing protein [Brugia malayi]
gi|158602643|gb|EDP38991.1| KH domain containing protein [Brugia malayi]
Length = 106
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 65/166 (39%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
E+ +IG G ++ +R +SGAKI+I+DG+CP+RIVT++GS
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGS------------------- 41
Query: 89 VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKD 148
+ + A+ +C L+
Sbjct: 42 ---IGTINKAFGMICAKLQQA--------------------------------------- 59
Query: 149 IRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+GA++QVAS+MLP STER VT+ G+ D+I + IC +L+E
Sbjct: 60 ----TGASIQVASEMLPSSTERAVTISGSADSIVDCMRNICQILLE 101
>gi|444319418|ref|XP_004180366.1| hypothetical protein TBLA_0D03470 [Tetrapisispora blattae CBS 6284]
gi|387513408|emb|CCH60847.1| hypothetical protein TBLA_0D03470 [Tetrapisispora blattae CBS 6284]
Length = 759
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 12 DTLITMR--CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVS 67
+T+I +R CL V++ S ++G G + ++++ + ++ ++D A P+R+V +
Sbjct: 102 ETIIHLRILCL------VSQASLVVGHHGRTIAKIKQTTQTRVHVSDNARGVPERVVHIR 155
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSV--DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
GS S +S G L V ++ DN N + D N++ M PL
Sbjct: 156 GS---SQDASFAVG-----LIVRAILGDNSIVNEN---HNPHDMFPNQSIMM----TPLT 200
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L L+IP G +IG+GG +++I SGA + + L S +R++++ GN +I A
Sbjct: 201 LHLLIPHHLVGCIIGRGGNHLREIESFSGARLFASPQQLVASNDRLLSITGNSGSIKIAT 260
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTM 212
Y I L+ Q+ + Y+P M
Sbjct: 261 YHIAESLLNANNQLKNRNTVFYQPSPM 287
>gi|154794955|gb|ABS86513.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 252
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 35 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 94
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 95 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 152
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 153 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 212
Query: 300 ----GCVIGKAGSRLLEIRQISGAQINI 323
GC+IGK G+ + EIR++SG++I+I
Sbjct: 213 ADMVGCIIGKGGAXINEIRRMSGSRISI 240
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 107 EDYHINRNRMENCSPQPLQLKLV------IPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
E+ H +R +P P+ +L+ IPA G +IGKGG I +IR +SG+ + +A
Sbjct: 182 ENGHRSRENSLASAPAPVADRLLRTQNISIPADMVGCIIGKGGAXINEIRRMSGSRISIA 241
>gi|294657857|ref|XP_460153.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
gi|199432999|emb|CAG88426.2| DEHA2E19492p [Debaryomyces hansenii CBS767]
Length = 347
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 93/206 (45%), Gaps = 18/206 (8%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVTVS 67
+ LI R L V+ E CLIG G ++ +R+E+ K IS +RI+TVS
Sbjct: 60 NSSALINYRVL----VSAKESGCLIGQNGAVIDSIREETNTKAGISKLQPGSHERILTVS 115
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
G++D+ + + Y L +++N+ + F + L + L+
Sbjct: 116 GTLDDCAKA---LSYFAQALCNANIENLVSYSYFPLKQLSSNPC-------VEGETTILR 165
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
L+IP G+LIG G +I+ I+ ++ + LP S ER+V + G D + ++
Sbjct: 166 LLIPNAQMGTLIGSKGARIQQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRI 225
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMN 213
I LIE +V + Y PK N
Sbjct: 226 ISRCLIEDFSSIVGTSY--YVPKASN 249
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 47/278 (16%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++++ A G LIG+ G I IR+ + + S + P S ERI+TV G D ++
Sbjct: 65 INYRVLVSAKESGCLIGQNGAVIDSIREETNTKAGI-SKLQPGSHERILTVSGTLDDCAK 123
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEP-KTMNAGP----------VILSGGQAYTLHGEYA 232
A+ L C + Y P K +++ P +++ Q TL G
Sbjct: 124 ALSYFAQAL--CNANIENLVSYSYFPLKQLSSNPCVEGETTILRLLIPNAQMGTLIGSKG 181
Query: 233 VPVQEVAGK--------KQPHPLAGLAVLGIEG-----------------------IGST 261
+Q++ K P + ++ ++G +G++
Sbjct: 182 ARIQQIQANYNISMIASKSFLPGSNERLVELQGTVDNLYDSLRIISRCLIEDFSSIVGTS 241
Query: 262 SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQI 321
P A + + + ++ + + V T I +D+ G +IGK GSR+ +R++SGA I
Sbjct: 242 YYVPKA-SNYARNNNQTNKRFNNQNAVTTSISFANDMVGALIGKNGSRIQGVRKVSGATI 300
Query: 322 NIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCIELQK 358
I E +++F I G AV A+ L+ +E ++
Sbjct: 301 GISDEVEGKPERVFTISGTAHAVEKAKSLLYHNLEREE 338
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 138/338 (40%), Gaps = 43/338 (12%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLW 88
+I +IG GG ++ +R+ESGA+I + D N S+ T +
Sbjct: 323 KIGLVIGRGGATIKNIRQESGARIDVDDAK-------------NDKEESIIT-----IIS 364
Query: 89 VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKD 148
S D+V +A ++E + + ++ + + L+L++P G LIG+GG + D
Sbjct: 365 TESTDDVKSA------AVEAVLLLQAKINDSEDDRMNLRLLVPNKVIGCLIGRGGSIVND 418
Query: 149 IRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL-QVVKGAV 204
+R + AN+ ++ P S++ +V V G D + A+ QI L L E L + V+
Sbjct: 419 MRKKTKANILISKGDKPRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQN 478
Query: 205 IPYEPKTMNAGPVILSGGQ----AYTLHGEYAVPVQEVAGKKQPHPLAGLAVL---GIEG 257
+ + A L G A H + P + ++ P L V G
Sbjct: 479 SDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAP---LGYDRRGEPERALEVFPRTSSYG 535
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQIS 317
S +T L K + E+ + V+GK G+ L IR+IS
Sbjct: 536 YSSMQVTDDGYGGLPS----YASKAYEEHVPRLEMTVPASGISKVMGKHGTNLDNIRKIS 591
Query: 318 GAQIN-IHTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
GA I I + H+ + +I G E A+ LI I
Sbjct: 592 GAHIEIIEPKSSRHEHIAYISGTSEQRHSAENLIKAFI 629
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 143/338 (42%), Gaps = 49/338 (14%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
+ D L+ R L S+ I +IG G ++ +R ++ AK+ + D R++ V
Sbjct: 36 NNDGLVLYRILCPDSL----IGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVY 91
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
V + ++ + + D + +N + +L+ H N + S + +
Sbjct: 92 CYVKHRD---LDAEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTE--EAN 146
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA-------SDMLPMSTERIVTVHGNPDT 180
+++PA+ ++IGK G IK +R S A ++V+ + MS + V + G +
Sbjct: 147 ILVPASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEA 206
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP--VILSGGQAYTLHGEYAVPVQEV 238
+ +A++ + ++ + + IP E + P +I S Y Y+ P +
Sbjct: 207 VKKALFGVSTIIYKHPSK----ENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAI 262
Query: 239 AGKKQPHPLAGLAVLGIEGIGSTSLTPA-ALAALSGSRVK------------SGGKDTGD 285
HP ++VL GST P A+ A R+ S K +G+
Sbjct: 263 PSV---HP--SMSVL-----GSTRHVPELAVPADDHGRLPIYQSILPVIPTYSAPKCSGE 312
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+E ++ G VIG+ G+ + IRQ SGA+I++
Sbjct: 313 --LEFRVLCPGGKIGLVIGRGGATIKNIRQESGARIDV 348
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP------DRIV 64
ED + +R L + V I CLIG GG IV +RK++ A I I+ G P D +V
Sbjct: 390 EDDRMNLRLLVPNKV----IGCLIGRGGSIVNDMRKKTKANILISKGDKPRRASSSDELV 445
Query: 65 TVSGSVDN 72
VSG D
Sbjct: 446 EVSGEADK 453
>gi|308798859|ref|XP_003074209.1| putative RNA-binding protein (ISS) [Ostreococcus tauri]
gi|116000381|emb|CAL50061.1| putative RNA-binding protein (ISS) [Ostreococcus tauri]
Length = 308
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 114/266 (42%), Gaps = 22/266 (8%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTI 181
LK +I + GS+IGKGG I + + L+GA VQ+ + ++ P + +R+V V G+ + I
Sbjct: 40 FTLKFLISPSAAGSVIGKGGATINEFQALTGARVQLSRSREVFPGTNDRVVIVSGDLNAI 99
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA--GPVILSGGQAYTLHGEYAVPVQEVA 239
Q +Y I L+ + + N G VI GG E + +++
Sbjct: 100 LQVLYLILTKLVADGEGIDRSGTPQLALVVPNGCCGCVIGKGGSKIRNFVEDSQADIKLS 159
Query: 240 GKKQPHPLAGLAVLGIEG--IGSTSLTPAALAALSGSR--------VKSGGKDTGDDFVE 289
+ + P L I G I + S+ A + G R V + GDD
Sbjct: 160 NQDRMLPGCNDRTLTITGRWIATYSVQAPLGARIGGGRRSGDHGRSVSGSSRRGGDDETS 219
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI------HTGTESHKKMFHIQGCQEAV 343
+ + D + G V+G+ G + E++ SG +I + GT + K + I G QE V
Sbjct: 220 ILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKVSARDDFFEGTRNRKVV--ITGSQEGV 277
Query: 344 SLAQYLINMCIELQKNNTTNTSDNPE 369
+A YL+ + +T P+
Sbjct: 278 QMANYLLTQKLSAIVGGSTEGGGFPD 303
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 137/343 (39%), Gaps = 63/343 (18%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+I +IG G +++LR E+GA I I D DR V +S + S
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVS------------ 559
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ----------PLQLKLVIPATHCG 136
D C LE I + +P P +L+I + G
Sbjct: 560 ------DRSCAELAL----LEVVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAG 609
Query: 137 SLIGKGGCKIKDIRDLSGANVQV-ASDMLPM-----STERIVTVHGNPDTISQAIYQICL 190
SLIGK G IK+IR S A+V+V SD LP+ T+R+V + G + AI +
Sbjct: 610 SLIGKAGANIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAA 669
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSG--GQAYTL-HGEYAV-----PVQEVAGKK 242
L + + +P P+ A + + G GQ L H A P
Sbjct: 670 NLRDNPPK----ETVPTNPEAKTAYFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGL 725
Query: 243 QPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCV 302
QPHPLAG A G G + P L A +R+ V E+ + + G +
Sbjct: 726 QPHPLAGPAYAG----GVLAQAP-PLYANPAARLPPMLPK-----VSAEMSVPSSVMGGL 775
Query: 303 IGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVS 344
IGK G + +R +SGA I ++ ES ++ +G QE S
Sbjct: 776 IGKGGFHISHMRSVSGATIKVNGSKESSVERTILFEGTQEQKS 818
>gi|254566093|ref|XP_002490157.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|238029953|emb|CAY67876.1| RNA binding protein with similarity to hnRNP-K that localizes to
the cytoplasm and subtelomeric DNA [Komagataella
pastoris GS115]
gi|328350558|emb|CCA36958.1| RNA-binding protein rnc1 [Komagataella pastoris CBS 7435]
Length = 379
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 137/353 (38%), Gaps = 76/353 (21%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
+TLIT R L V+ E +IG G + +R K +++ C DRI+T+SGS
Sbjct: 97 NTLITHRFL----VSKREAGTIIGKEGSCITSIRMGCDVKAGVSELVRGCVDRILTISGS 152
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
V+N G L VD + S + R ++L+
Sbjct: 153 VEN-------VGRAVGRLAQVLVDTAAFSQLDFAPSGGTSVMGVTR----------IRLL 195
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP T G+LIGK G +I+ ++ + + D L STER+V V G P I A I
Sbjct: 196 IPNTQMGALIGKRGIRIRALQQYHSVKMVASKDPLANSTERVVEVQGTPLAIESAAVTIS 255
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
L+E + I Y ++A P G A
Sbjct: 256 KCLLE-DFMLPAADTIYY----VSAPPAGYGG--------------------------AA 284
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
A G + S SL P + ET + ++ G +IGK G R
Sbjct: 285 RATTGDSFLNSDSLGPTS--------------------TET-VYFPGELVGAIIGKRGVR 323
Query: 310 LLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNT 361
+ EIR++SG I+I + T ++ F + G V A ++ +E +K+ T
Sbjct: 324 IQEIRKLSGCAISIDSANTTGGERRFVLTGPVRNVDRALAMLTGLVEREKSRT 376
>gi|126138010|ref|XP_001385528.1| hypothetical protein PICST_62156 [Scheffersomyces stipitis CBS
6054]
gi|126092806|gb|ABN67499.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 343
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 92/190 (48%), Gaps = 21/190 (11%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAK--ISITDGACPDRIVT 65
K++ LI R L V+ E CLIG G ++ +R E+ K IS +RI+T
Sbjct: 60 KVNASALINYRVL----VSAKESGCLIGQNGQVIDSIRAETNTKAGISRLQPGSHERILT 115
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC-SPQPL 124
VSG++D+ + + Y L ++++ YNF + + + C Q
Sbjct: 116 VSGTLDDCAKA---LSYFAQALCNSTIE----TYNF-------FPLKQLSSNPCIEHQTT 161
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L+IP + G+LIG G +I+ I++ ++ + LP S ER+V + G+ + + A
Sbjct: 162 ILRLLIPNSQMGTLIGSKGLRIQQIQNKYNISMIASKSFLPGSNERLVELQGSVNDLYDA 221
Query: 185 IYQICLVLIE 194
+ I LIE
Sbjct: 222 LRIISRCLIE 231
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 42/280 (15%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ ++++ A G LIG+ G I IR + + S + P S ERI+TV G D ++
Sbjct: 67 INYRVLVSAKESGCLIGQNGQVIDSIRAETNTKAGI-SRLQPGSHERILTVSGTLDDCAK 125
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP----------VILSGGQAYTLHGEYAV 233
A+ L T++ + K +++ P +++ Q TL G +
Sbjct: 126 ALSYFAQALCNSTIETYNF----FPLKQLSSNPCIEHQTTILRLLIPNSQMGTLIGSKGL 181
Query: 234 PVQEVAGKKQPHPLAGLAVLG------IEGIGSTSLTPAALAALSGSRVKSGGKDTGDDF 287
+Q++ K +A + L +E GS + AL +S ++ G ++
Sbjct: 182 RIQQIQNKYNISMIASKSFLPGSNERLVELQGSVNDLYDALRIISRCLIEDFSSIVGTNY 241
Query: 288 --------------------VETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
I +DI G +IGK GSR+ +R+ISGA I I
Sbjct: 242 YIPRGHHYNNSSSPRGANPITTASISFPNDIVGALIGKNGSRIQGVRKISGATIGISEEV 301
Query: 328 ESH-KKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
E +++F + G AV A+ L+ +E ++ + +
Sbjct: 302 EGKPERIFTLSGSAHAVEKAKELLYHNLEREEQRRSEAEE 341
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 30/186 (16%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVT 65
I+ T I +R L +S ++ LIG G +++++ + + + P +R+V
Sbjct: 156 IEHQTTI-LRLLIPNS----QMGTLIGSKGLRIQQIQNKYNISMIASKSFLPGSNERLVE 210
Query: 66 VSGSVDNSSTSSVETGYPGHTLW-VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP- 123
+ GSV++ L+ + + C +F +Y+I R N S P
Sbjct: 211 LQGSVND--------------LYDALRIISRCLIEDFSSIVGTNYYIPRGHHYNNSSSPR 256
Query: 124 -----LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
+ P G+LIGK G +I+ +R +SGA + + S+ + ERI T+ G+
Sbjct: 257 GANPITTASISFPNDIVGALIGKNGSRIQGVRKISGATIGI-SEEVEGKPERIFTLSGSA 315
Query: 179 DTISQA 184
+ +A
Sbjct: 316 HAVEKA 321
>gi|410925642|ref|XP_003976289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Takifugu rubripes]
Length = 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++V+ S+D
Sbjct: 41 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASID 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
T+ + + T + S D+ +L+L+I
Sbjct: 97 --------------TIGKILLKIIPTLEEYQHYSGIDFD-------------SELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V V G P+ + + I ++ L
Sbjct: 130 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVIECI-KVILE 188
Query: 192 LIECTLQVVKGAVIPYEP 209
L+ T +KG PY+P
Sbjct: 189 LVSET--PIKGRTQPYDP 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 272 SGSRVKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
S R +SG + D G + T++ + D+AG +IGK G R+ +IR GA I I
Sbjct: 335 SWERFQSGSRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPL 394
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ +
Sbjct: 395 EGSEDRIITITGTQDQIQNAQYLLQNSVR 423
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR GA++++ + L S +RI+T+ G D I A Y
Sbjct: 358 QVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 416
>gi|410925644|ref|XP_003976290.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Takifugu rubripes]
Length = 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI++V+ S+D
Sbjct: 41 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSVNASID 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
T+ + + T + S D+ +L+L+I
Sbjct: 97 --------------TIGKILLKIIPTLEEYQHYSGIDFD-------------SELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V V G P+ + + I ++ L
Sbjct: 130 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVIECI-KVILE 188
Query: 192 LIECTLQVVKGAVIPYEP 209
L+ T +KG PY+P
Sbjct: 189 LVSET--PIKGRTQPYDP 204
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 272 SGSRVKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
S R +SG + D G + T++ + D+AG +IGK G R+ +IR GA I I
Sbjct: 335 SWERFQSGSRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPL 394
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ +
Sbjct: 395 EGSEDRIITITGTQDQIQNAQYLLQNSVR 423
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR GA++++ + L S +RI+T+ G D I A Y
Sbjct: 358 QVTIPKDLAGSIIGKGGQRIKQIRHECGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 416
>gi|223649086|gb|ACN11301.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 440
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 95/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 41 DDMVELRILLQSK----NAGAVIGKGGKNIKSLRTDFNASVSVPDSSGPERILSISAEIE 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+V + + +LE+Y +C +L+L+I
Sbjct: 97 -------------------TVGEILLK---IIPTLEEYQQYNGMDFDC-----ELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++R+ + ++++ + P ST+R+V V G + + + I +I L
Sbjct: 130 QSLAGSIIGVKGAKIKELRENTQTSIKLFQECCPQSTDRVVLVGGKSERVVECI-KIMLE 188
Query: 192 LIECTLQVVKGAVIPYEP 209
LI +KG PY+P
Sbjct: 189 LI--AEAPIKGRAQPYDP 204
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 277 KSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHK 331
+SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I E S
Sbjct: 350 QSGGRGSYNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 409
Query: 332 KMFHIQGCQEAVSLAQYLI 350
++ I G Q+ + AQYL+
Sbjct: 410 RIITISGTQDQIQNAQYLL 428
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 368 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQNAQY 426
>gi|6006748|gb|AAF00596.1|AF142631_1 hnRNP K protein homolog [Drosophila melanogaster]
Length = 490
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP K [Xenopus laevis, Peptide, 396
aa]
Length = 396
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 40/200 (20%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 37 DMMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 92
Query: 72 NSSTSSVETGYPGHTLW--VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
G L + +++ +F C +L+L+
Sbjct: 93 TI----------GEILKKIIPTLEEHFKGNDFDC---------------------ELRLL 121
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I I
Sbjct: 122 IHQSLAGGIIGVKGAKIKELREKTQTTIKLFQECCPHSTDRVVLIGGRPDRVVECIKVIL 181
Query: 190 LVLIECTLQVVKGAVIPYEP 209
++ E VKG PY+P
Sbjct: 182 DLISESP---VKGRSQPYDP 198
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A +
Sbjct: 321 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSDDRIITITGTQDQIQNARF 379
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 312 DIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSDDRIITITGTQ 371
Query: 341 EAVSLAQYLINMCIE 355
+ + A++L+ ++
Sbjct: 372 DQIQNARFLLQNSVK 386
>gi|281363839|ref|NP_001163216.1| bancal, isoform E [Drosophila melanogaster]
gi|272432584|gb|ACZ94488.1| bancal, isoform E [Drosophila melanogaster]
Length = 493
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|355567865|gb|EHH24206.1| hypothetical protein EGK_07823 [Macaca mulatta]
Length = 464
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + + + + P ST+R++ + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQPTITLFQECCPHSTDRVILIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHK-KMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E K ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGFKDQIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L ++I+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGFKDQIITITGTQDQIQNAQY 449
>gi|45552763|ref|NP_995906.1| bancal, isoform C [Drosophila melanogaster]
gi|45445681|gb|AAM68389.2| bancal, isoform C [Drosophila melanogaster]
gi|261338783|gb|ACX70073.1| RE05515p [Drosophila melanogaster]
Length = 502
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 16 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 71
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 72 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 103
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 104 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 158
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 159 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 188
>gi|45552765|ref|NP_995907.1| bancal, isoform A [Drosophila melanogaster]
gi|442624312|ref|NP_001261102.1| bancal, isoform F [Drosophila melanogaster]
gi|21626883|gb|AAF57450.2| bancal, isoform A [Drosophila melanogaster]
gi|189182182|gb|ACD81867.1| LP16172p [Drosophila melanogaster]
gi|440214543|gb|AGB93634.1| bancal, isoform F [Drosophila melanogaster]
Length = 496
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|363738574|ref|XP_003642030.1| PREDICTED: poly(rC)-binding protein 4-like [Gallus gallus]
Length = 222
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D+ E ++ +D+ GC+IG+ GS++ EIRQ+SGA I I TE S ++ I G
Sbjct: 44 GLDSNSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSERHITITG 103
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLDAAIS 378
+++LAQYLI C+E K +T+ P DL S
Sbjct: 104 NPVSITLAQYLITTCLETAK-STSQVPLGPGSVDLGVGFS 142
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+ ++P G +IG+ G KI +IR +SGA++++ + S+ER +T+ GNP +I+ A Y
Sbjct: 55 EFLVPNDLIGCIIGRHGSKISEIRQMSGAHIKIG-NQTEGSSERHITITGNPVSITLAQY 113
Query: 187 QI--CLVLIECTLQVVKG 202
I CL + T QV G
Sbjct: 114 LITTCLETAKSTSQVPLG 131
>gi|195585141|ref|XP_002082349.1| GD11524 [Drosophila simulans]
gi|194194358|gb|EDX07934.1| GD11524 [Drosophila simulans]
Length = 496
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 172/398 (43%), Gaps = 80/398 (20%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSGSVDNSSTSSVETG---- 81
+I +IG GG IV++LR E+ AKI I T C +R+VT+ D T++VE G
Sbjct: 51 RKIGSVIGRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDE--TNAVEGGGNYV 108
Query: 82 YPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
P D V ED+H +++ + KL++P+ G +IGK
Sbjct: 109 SPAQDALFKVHDRVVA---------EDFHGDQDDDGGQQ---VTAKLLVPSDQIGCVIGK 156
Query: 142 GGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIEC-- 195
GG +++IR +GA +++ D LP +S++ +V + G+ + +A+ QI L +
Sbjct: 157 GGSIVQNIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPS 216
Query: 196 -TLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLG 254
+ ++ AV P AG ++ G P+ +A PL G A G
Sbjct: 217 RSQHLLTSAV----PGVYPAGGSLIGPGA--------GAPIVGIA------PLVG-AYGG 257
Query: 255 IEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIR 314
+G + P ++ S R ++ K +F + T +I G VIGK G + +IR
Sbjct: 258 YKG-DTGDWPPRSM--YSAPRDEASTK----EFSVRLVCPTGNIGG-VIGKGGMIINQIR 309
Query: 315 QISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYL-------INMCIELQKNNTTNTSDN 367
Q SGA I + + T + C A+S ++ I + LQ +
Sbjct: 310 QESGATIKVDSSTTEGDE------CLIAISTKEFFEETFSPTIEAAVRLQPRCS------ 357
Query: 368 PEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVTLGG 405
E + D+ I +F T + PT G ++ GG
Sbjct: 358 -EKVERDSGIISFTTR------LLVPTSRIGCLIGKGG 388
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 36/214 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT--- 86
I +IG GG I+ ++R+ESGA I VD+S+T E T
Sbjct: 294 IGGVIGKGGMIINQIRQESGATIK----------------VDSSTTEGDECLIAISTKEF 337
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
T + A R E + + +L++P + G LIGKGG I
Sbjct: 338 FEETFSPTIEAAVRLQPRCSEKVERDSGIIS------FTTRLLVPTSRIGCLIGKGGSII 391
Query: 147 KDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKG 202
++R L+ AN+++ S + LP + +V + G+ D A+ + L + L +G
Sbjct: 392 TEMRRLTKANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHV-LTRLRANLFDREG 450
Query: 203 A------VIPYEPKTMNAGPVILSGGQAYTLHGE 230
A V+PY P + + + G+ HG
Sbjct: 451 ALSSFLPVLPYLPVSADGSDGLNYDGRDGKRHGR 484
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 101/409 (24%), Positives = 173/409 (42%), Gaps = 56/409 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
N I +IG GG +++ +R+E+ +KI + D A P +R++ + S + +
Sbjct: 51 NVIGSVIGKGGKVIKSMRQETRSKIRVAD-AVPGVDERVIVIFSSPLSKDKEKDDDDD-- 107
Query: 85 HTLWVTSVDNVCTAYNFMCRS----LEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
+ VC A + + R +++ N + PQ +L++ + GSLIG
Sbjct: 108 ----DNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQ--DARLLVANSQIGSLIG 161
Query: 141 KGGCKIKDIRDLSGANVQVA-SDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIE-- 194
KGG I+ +R SGA +Q+ D LP S + +V + G+ + +A+Y + L +
Sbjct: 162 KGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHP 221
Query: 195 CTLQVVKGAVIP------YEPKTMNAGPV--ILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
Q+ ++P P + P L G + H + P+ A +
Sbjct: 222 PKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASR----- 276
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
L GL G E + L+ AL + S S K T ++F ++ +D G VIGK
Sbjct: 277 LPGLGGYGSEAGSAWPLSNPALPSFS-KFGNSTTKKTSEEF-SIRVLCPNDKIGGVIGKG 334
Query: 307 GSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTS 365
G+ + +R +GA I + TES +++ + + A I + LQ + T
Sbjct: 335 GNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDRVSPTIEAVLLLQGKTSGTT- 393
Query: 366 DNPEPADLDAAISAFMTASVNSSLIEKPTPHPGSMVTLGG--LSELLAN 412
D D AIS P+ H G ++ GG +SE+ AN
Sbjct: 394 ------DKDGAISTRFLV---------PSKHIGCLLGKGGNIISEMRAN 427
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 22/188 (11%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSG 68
EDT+ C +I +IG GG IV++LR E+ AKI I T C +R+VTV
Sbjct: 45 EDTVFRYLCPGR------KIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYS 98
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
S D ++T G L + D + ++ + ED H ++ E PQ + KL
Sbjct: 99 SSDETNTVD-----DGDKLVSPAEDALFKIHDRVV--AEDLHSDQE--EEGGPQ-VNAKL 148
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQA 184
++P+ G ++GKGG ++++R +GA +++ D +P + ++ +V + G+ + +A
Sbjct: 149 LVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKA 208
Query: 185 IYQICLVL 192
++QI L
Sbjct: 209 LHQIASRL 216
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTIS 182
+L++ ++ G LIGKGG I ++R L+ +N+++ S + LP + +V + G+ D
Sbjct: 377 RLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAK 436
Query: 183 QAIYQICLVLIECTLQVVKGA------VIPYEPKTMNAGPVILS 220
A+ Q+ L + L +GA V+PY P ++ GP +L+
Sbjct: 437 DALVQV-LTRLRANLFDREGAVPGFLPVLPYIPAPVD-GPDVLN 478
>gi|195119576|ref|XP_002004307.1| GI19683 [Drosophila mojavensis]
gi|193909375|gb|EDW08242.1| GI19683 [Drosophila mojavensis]
Length = 509
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
DG D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 9 DGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 64
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S +D ++++ + + E+Y +
Sbjct: 65 RTIQISTDID------------------STLEIITEMLKYFEERDEEYDV---------- 96
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 97 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 151
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KG + Y+P +
Sbjct: 152 VIEAVREVITLTRDTP---IKGPIHNYDPMNFD 181
>gi|392333155|ref|XP_003752811.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ + L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELHILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 272 SGSRVKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
SG +GG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 368 SGYDSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPL 427
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + QYL+ ++
Sbjct: 428 EGSEDRIITITGTQDQIQNTQYLLQNSVK 456
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNTQY 449
>gi|195430448|ref|XP_002063267.1| GK21481 [Drosophila willistoni]
gi|194159352|gb|EDW74253.1| GK21481 [Drosophila willistoni]
Length = 505
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
D D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 9 DAAQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 64
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 65 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 96
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 97 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 151
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 152 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 181
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 60/362 (16%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTSSVETGYPGH 85
+ I ++G GG IV+ L+ E+GA IS+ C DR++T++ + S S P
Sbjct: 275 DRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITITALENPESRFS-----PAQ 329
Query: 86 TLWVTSVDNVCTAYNFMCRSLE-------DYHINRNRMENCSPQPLQLKLVIPATHCGSL 138
V CRS+E D+ N+ + +LV+P+ G L
Sbjct: 330 EAVVL----------VFCRSIECCIEKVVDWRSNKE-------SSVTAQLVVPSNQVGVL 372
Query: 139 IGKGGCKIKDIRDLSGANVQVASD-MLPM---STERIVTVHGNPDTISQAIYQICLVLIE 194
+GKGG + ++R + ++++ + +P +++V + G + A+Y L +
Sbjct: 373 LGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRD 432
Query: 195 CTLQVVK--GAVIPYEPKTMNAGPVILSGGQAY--TLHGEYA---------VPVQEVAGK 241
+ + G PY + ++ P+ L GGQ+ + HG + + +G+
Sbjct: 433 HIFLIAQNSGGTGPYR-RPRDSIPLGL-GGQSVVGSNHGPSIHSLSQSMDHLTLSRNSGR 490
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT--GDDFVET----EIVLT 295
+ V+G + T L G + G +T G+ + T EI+L
Sbjct: 491 SASSGVWAPKVVGGKNSRYTDDAGRRLNPREGDLELASGSNTVIGNAAIITNTTVEIMLP 550
Query: 296 DDIAGCVIGKAGSRLLEIRQISGAQINIHT---GTESHKKMFHIQGCQEAVSLAQYLINM 352
+DI G V G+ GS L ++RQISGA++ H GT K+ + G + AQ L+
Sbjct: 551 NDIIGSVYGENGSNLDQLRQISGAKVVFHEPRPGTSDRAKIV-LSGTPDETQAAQSLLQA 609
Query: 353 CI 354
I
Sbjct: 610 YI 611
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 134/325 (41%), Gaps = 59/325 (18%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDN 72
+ R L H+S I IG G +++ L++ +GA+I I D CP+R++ V +++
Sbjct: 20 VVFRLLCHAS----RIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNG 75
Query: 73 SSTSSVETGYPGHTLW--VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
S+ P L + +V A + D + +R+ +C +L++
Sbjct: 76 DGDVSLN---PQEALLKVFERILDVAAAES-------DGNGVGDRVVSC-------RLLV 118
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST---ERIVTVHGNPDTISQAIYQ 187
A G +IGKGG + IR +G ++V +D LP T + I+ + G ++ +A+
Sbjct: 119 NAGQAGGVIGKGGMVVAKIRADTGCRIRVLNDKLPACTKPSDEIIEIQGIASSVKKALVA 178
Query: 188 ICLVLIEC-TLQVVK-GAVIPYEPKTMNAGPVILSG----GQAYTLHGEYAVPVQEVAGK 241
+ L +C L K PYE V G + L A+ +
Sbjct: 179 VAGRLQDCPPLDRTKMMGTRPYEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSN 238
Query: 242 KQP---HPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDI 298
P HPL+ +E +SL P AL V I+ + D
Sbjct: 239 GVPSKSHPLS------VEDNRVSSLDPEAL----------------KQEVTFRILCSGDR 276
Query: 299 AGCVIGKAGSRLLEIRQISGAQINI 323
G V+GK GS + ++ +GA I++
Sbjct: 277 IGAVLGKGGSIVKALQNETGANISV 301
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 22/188 (11%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSG 68
EDT+ C +I +IG GG IV++LR E+ AKI I T C +R+VTV
Sbjct: 45 EDTVFRYLC------PGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYS 98
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKL 128
S D ++T G L + D + ++ + ED H ++ E PQ + KL
Sbjct: 99 SSDETNTVD-----DGDKLVSPAEDALFKIHDRVV--AEDLHSDQE--EEGGPQ-VNAKL 148
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQA 184
++P+ G ++GKGG ++++R +GA +++ D +P + ++ +V + G+ + +A
Sbjct: 149 LVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDELVQISGDAAVVKKA 208
Query: 185 IYQICLVL 192
++QI L
Sbjct: 209 LHQIASRL 216
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTIS 182
+L++ ++ G LIGKGG I ++R L+ +N+++ S + LP + +V + G+ D
Sbjct: 377 RLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDEMVQISGDLDVAK 436
Query: 183 QAIYQICLVLIECTLQVVKGA------VIPYEPKTMNAGPVILS 220
A+ Q+ L + L +GA V+PY P ++ GP +L+
Sbjct: 437 DALVQV-LTRLRANLFDREGAVPGFLPVLPYIPAPVD-GPDVLN 478
>gi|6687391|emb|CAB64936.1| heterogeneous nuclear ribonucleoprotein (hnRNP) [Drosophila
melanogaster]
Length = 496
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|392347947|ref|XP_003749978.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 97/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ + L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELHILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPAATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S + I G Q+ + AQYL+ ++
Sbjct: 430 SEDWIITITGTQDQIQNAQYLLQNSVK 456
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S + I+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDWIITITGTQDQIQNAQY 449
>gi|209148569|gb|ACI32944.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 443
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 95/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
+ ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++ ++
Sbjct: 41 EDMVELRILLQSK----NAGAVIGKGGKNIKSLRTDFNASVSVPDSSGPERILSIGAEIE 96
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+V ++ + +LE+Y +C +L+L+I
Sbjct: 97 -------------------TVGDILLK---IIPTLEEYQQYNGMDFDC-----ELRLLIH 129
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++R+ + N+++ + P ST+R+V V G + + + I +I L
Sbjct: 130 QSLAGSIIGVKGAKIKELRENTQTNIKLFQECCPQSTDRVVLVSGKSERVVECI-KIMLD 188
Query: 192 LIECTLQVVKGAVIPYEP 209
LI +KG PY+P
Sbjct: 189 LI--AEAPIKGRTQPYDP 204
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 272 SGSRVKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGT 327
S + +SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 348 SWNSYQSGGRASYNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPL 407
Query: 328 E-SHKKMFHIQGCQEAVSLAQYLI 350
E S ++ I G Q+ + AQYL+
Sbjct: 408 EGSEDRIITISGTQDQIQNAQYLL 431
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 371 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQNAQY 429
>gi|403375361|gb|EJY87653.1| KH domain containing protein [Oxytricha trifallax]
Length = 794
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 90/226 (39%), Gaps = 43/226 (19%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSG 68
+ + + I + + VN I LIGP G +RL +ESG KI ++ G
Sbjct: 255 LQDSSKIKKKIYLPKNSGVNFIGLLIGPKGLYQKRLEEESGCKI----------LIRGRG 304
Query: 69 SVDNSSTSSVETGYPGHTLWV-TSVDNVCTAYNFMCR--SLEDYHINRNRMENCS----- 120
S S + H L + SV+NV A N + R S +D N+ R E S
Sbjct: 305 SQKEGSAPQPDDDDDQHVLVIGDSVENVRRAQNAIERVVSADDSTRNKIREEQLSVAQQI 364
Query: 121 --------------------PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
P P + +P G +IGK G I+ ++ SGA +QVA
Sbjct: 365 NNQVLPTSQMDDSMMTPYGPPSPYAYIIPVPNDCVGLIIGKSGDTIRQLQQDSGAKIQVA 424
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP 206
+P S R V V G PD YQ LIE ++ + + P
Sbjct: 425 KKEIPNSNLRNVFVEGTPDK-----YQKAKELIEEIIKDQRRSSDP 465
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 45/204 (22%)
Query: 20 LFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSS 77
+F V V ++ +IG G V+R+ +E+ ++I I +G +RIV VS D +
Sbjct: 14 VFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAA-- 71
Query: 78 VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-----------PLQL 126
+ A + R ++R +E P+ P+
Sbjct: 72 -----------------ISPAMEGLLR------VHRRVIEGAEPESVDAEIAPGGAPVSS 108
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTIS 182
+L++ AT GSLIG+ G IK I+D SGANV+V ++ LP ++ +R+V V G+P +
Sbjct: 109 RLLVAATQAGSLIGRQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQ 168
Query: 183 QAIYQICLVLIECTLQVVKGAVIP 206
+A+ LV+ +V +V+P
Sbjct: 169 RAME---LVVSHLRKFLVDRSVLP 189
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIDAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|313239457|emb|CBY14391.1| unnamed protein product [Oikopleura dioica]
Length = 203
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 36/207 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D +T+R L N + S +IG ++ LR+++ I+++ R++T++
Sbjct: 5 DIDLTLRFLM----NQKQASQIIGRNASNIKNLREQTECNITLSSREHEKRLLTIAAK-- 58
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ S++T V+ + + A N +Y ++ P+ L LVIP
Sbjct: 59 --KSISMKT--------VSRLGEILEAEN------NEYG------KSTKLVPITLTLVIP 96
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
CG +IGKGG +KD+R SGA + +++D LP S ER + GN +++QAI + +
Sbjct: 97 KNICGMIIGKGGEALKDLRVKSGAQINMSADCLPKSDERTCQITGNNISVTQAIDLLIGI 156
Query: 192 LIECTLQVVKG--------AVIPYEPK 210
+I+ + KG + Y+PK
Sbjct: 157 MIKAAIDESKGEFKGTPSAEIRAYDPK 183
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYKASVSVPDSSGPERILSISADIE 95
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+V + + +LE+Y +C +L+L+I
Sbjct: 96 -------------------TVGEILLK---IIPTLEEYQQYNGMDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++R+ + ++++ + P ST+R+V V G + + + I + +
Sbjct: 129 QSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKTERVVECIKTMLEL 188
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E +KG PY+P
Sbjct: 189 ISEAP---IKGRTQPYDP 203
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Query: 276 VKSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SH 330
+SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I E S
Sbjct: 344 YQSGGRGSYNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSE 403
Query: 331 KKMFHIQGCQEAVSLAQYLINMCIE 355
++ I G Q+ + AQYL+ ++
Sbjct: 404 DRIITISGTQDQIQNAQYLLQNSVK 428
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 363 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITISGTQDQIQNAQY 421
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 94/198 (47%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S ++
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRSDYNASVSVPDSSGPERILSISADIE 95
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+V + + +LE+Y +C +L+L+I
Sbjct: 96 -------------------TVGEILLK---IIPTLEEYQQYNGMDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++R+ + ++++ + P ST+R+V V G + + + + + +
Sbjct: 129 QSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKSERVVECVKTMLEL 188
Query: 192 LIECTLQVVKGAVIPYEP 209
+ E +KG PY+P
Sbjct: 189 ISEAP---IKGRTQPYDP 203
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 277 KSGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHK 331
+SGG+ D G + T++ + D+AG +IGK G R+ +IR SGA I I E S
Sbjct: 343 QSGGRGSYSDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSED 402
Query: 332 KMFHIQGCQEAVSLAQYLINMCIE 355
++ I G Q+ + AQYL+ ++
Sbjct: 403 RIITITGTQDQIQNAQYLLQNSVK 426
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 361 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 419
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 86/173 (49%), Gaps = 21/173 (12%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSGSVDNSSTSSVETGY--P 83
+I +IG GG IV++LR ++ +KI I T C +R+VT+ S D ++ + P
Sbjct: 52 RKIGSIIGRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSP 111
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
D V + E+ H ++ + ++L++P+ G +IGKGG
Sbjct: 112 AQDALFRVHDRVVS---------EEVHGE----DSEEASQVTVRLLVPSDQIGCVIGKGG 158
Query: 144 CKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLVL 192
I+ IR SGA V++ D LP +S++ +V + G P + +A+YQI L
Sbjct: 159 QIIQSIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRL 211
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTIS 182
+L++P + G LIGKGG I ++R L+ AN+++ S + LP + +V + G+ D
Sbjct: 372 RLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDDEMVQIAGDLDVAK 431
Query: 183 QAIYQICLVLIECTLQVVKGA------VIPYEPKTMNAGPVILSGGQAYTLHGE 230
A+ Q+ L L +GA V+PY P + + G+ HG
Sbjct: 432 DALIQVTTRL-RANLFDREGAVSAFVPVLPYLPMAADGSDGLKYDGRDNKRHGR 484
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 96/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIDAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 146/359 (40%), Gaps = 40/359 (11%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDNSSTS 76
C+F V V+++ +IG G ++++ +E+ A+I + DG PDRIV +SG + +
Sbjct: 74 CVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYM 133
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
S ++D V + + L D + + ++N ++L++ +T
Sbjct: 134 S------------PAMDAVLRVFRRVS-GLPDN--DDDDVQNAGSAFCSVRLLVASTQAI 178
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPDTISQAIYQIC--- 189
+LIGK G IK I + SGA+V++ S+ ERIV + G I +A+ I
Sbjct: 179 NLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHL 238
Query: 190 --LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
++ + + + + +T P+ S +T+ P + ++ P
Sbjct: 239 RKFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNVIEPDFSLLARRDP--- 295
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV--------LTDDIA 299
L + + + P ++ S V S G V + V + A
Sbjct: 296 ---LFLDRDARVESRVQPTGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYA 352
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+IG G+ + IR+ SGA I I + I+G V A+ LI I K
Sbjct: 353 EDIIGVEGANIAYIRRRSGATITIKESPHPDQITVEIKGTSSQVQTAEQLIQEFISNHK 411
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 141/351 (40%), Gaps = 96/351 (27%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGS 69
IT++ L S +IG GG V L+ ++G++I ++ DRIVTV G+
Sbjct: 3 ITLKFLLPDSA----AGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGT 58
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ + A++ M L R+ +P +KLV
Sbjct: 59 APS----------------------ILGAFHLMISKLV-----RDGEGLVGGRP-HVKLV 90
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASD--MLPMSTERIVTVHGNPDTISQAIYQ 187
IP CG +IG+GG I++ D S A ++++S MLP ER++T+ G D + +AI
Sbjct: 91 IPNASCGCIIGRGGATIRNFADDSQAEIKLSSQEHMLPGVNERVLTITGANDRVLRAIAL 150
Query: 188 ICLVLIE--CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
+ L + C +++ P T YT+ G P
Sbjct: 151 VATALSQDGCYEELIS------RPST-------------YTIDG-------------MPM 178
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
P +G+ AA V+ G G D + I + D+ G V+GK
Sbjct: 179 PYSGIN--------------NDFAAAVNHNVEHGRSQDG-DVISVAIDVPDEHIGAVLGK 223
Query: 306 AGSRLLEIRQISGAQINIH------TGTESHKKMFHIQGCQEAVSLAQYLI 350
G + EI+ SG +I + GT++ + + G + V +A++L+
Sbjct: 224 GGRTISEIQITSGIRIKVSERGDYVEGTKNRR--VTLTGAGDKVQMARFLL 272
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 35/194 (18%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGA--KISITDGACP---DRIVT 65
ED + ++ L S +IG GG + +L+KE+GA K+S ++ P +RIV
Sbjct: 62 EDGQLLLKVLIPSYA----AGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVV 117
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
++GS D S SV H + + + A +S + + N NR + Q
Sbjct: 118 ITGSED--SLKSV------HKFLM---EKISQAPQPPAKSPSEQNANNNRAK-------Q 159
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM-----LPMSTERIVTVHGNPDT 180
+K+V+P + G +IGKGG IK I + +G+ VQ++ LP ER++T+ G P+
Sbjct: 160 VKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLP---ERVITITGEPEQ 216
Query: 181 ISQAIYQICLVLIE 194
+A I ++E
Sbjct: 217 NDKACAFIVNKIVE 230
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQ 337
D + VE E+ +++ G ++GK G L+E ++ SGA+I I E ++ + I
Sbjct: 423 DGSKNVVELEV--PENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTIT 480
Query: 338 GCQEAVSLAQYLINMCI 354
G A AQYL+ I
Sbjct: 481 GTPAATQTAQYLVRARI 497
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
++L +P G+++GKGG + + ++ SGA +Q++ + P + R VT+ G P
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 184 AIYQI 188
A Y +
Sbjct: 489 AQYLV 493
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 33/221 (14%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIV 64
G G+ ++ + R L S + +IG GG ++ LR + ++++ D P+R++
Sbjct: 124 GYGQKRDEPGVGHRFLIPSKM----AGAVIGKGGTTIKSLRSDFACQLNVPDAQGPERVL 179
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL 124
+V NV + L + + RNR + S +
Sbjct: 180 R----------------------FVCEDSNVSPLIEKVGNLLRNDMVERNRAQADSD--I 215
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+++++ + G++IG G IK +RD +G + V D P S++R++ V G PD I+
Sbjct: 216 DMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDPAPHSSDRLIKVAGQPDKIATC 275
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAY 225
+I L+L + KG V ++P+ NA GG AY
Sbjct: 276 FGEILLILNDIP---PKGFVQEFDPE--NADSTFDYGGFAY 311
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 33/185 (17%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPG 84
V+ +IG GG ++RLR E A + + D P+R+ TV
Sbjct: 56 VSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTV------------------ 97
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
T +V N+ + + R LED R+ P +++++I +H G+LIG+ G
Sbjct: 98 -TADEKTVLNILK--DVLPR-LEDNFSERD--------PCEVRMLIHQSHAGALIGRNGS 145
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
KIK++R+ A +++ + P ST+R++ G + I ++ L E +KG+
Sbjct: 146 KIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLAIIEEVMRELKEIP---IKGSA 202
Query: 205 IPYEP 209
PY P
Sbjct: 203 TPYLP 207
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLI 350
++ + D+ G +IG+ G R+ IRQ SGAQI + +++ I+G ++ + AQYL+
Sbjct: 320 QVTIPSDLGGTIIGRGGERIARIRQDSGAQITLEPSNGQPERIITIKGTEQQIHSAQYLL 379
Query: 351 NMCIE 355
C+
Sbjct: 380 QQCVR 384
>gi|255725734|ref|XP_002547796.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135687|gb|EER35241.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 379
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVT 65
K + D LI R L V+ E CLIG G ++ +R E+ K I+ +RI+T
Sbjct: 92 KSNVDALINYRVL----VSAKEAGCLIGTNGQVIDSIRGETNTKAGISRLVPGSHERILT 147
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
VSG +D+ + + Y L +++ +YN+ L+ N E
Sbjct: 148 VSGKLDDCAKA---LSYFAQALVNANIE----SYNYF--PLKQLSSTPNTEETTI----- 193
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L+IP T G+LIG G +I+ I+ ++ + LP S ER+V + G+ D + ++
Sbjct: 194 LRLLIPNTQMGTLIGSKGARIQQIQSKYNISMIASKSFLPGSNERLVELQGSVDDLYDSL 253
Query: 186 YQICLVLIECTLQVVKGAVIPYEPK 210
I L+E +V V Y P+
Sbjct: 254 RVISRCLMEDFSSIV--GVSYYVPR 276
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLI 350
+ +DI G +IGK G+R+ +R+I+GA I+I G E +++F I G +AV A+ +I
Sbjct: 308 LTFPNDIVGALIGKQGARINGVRKITGATISISDGGE-DERIFTITGSSQAVEKAKQMI 365
>gi|355753438|gb|EHH57484.1| hypothetical protein EGM_07121 [Macaca fascicularis]
Length = 464
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFA--------C-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P S +R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSADRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 267 ALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
A + +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I
Sbjct: 369 ADYSYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEP 426
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G Q+ + AQYL+ ++
Sbjct: 427 LEGSEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-TAYNFMCRSLEDYHIN------RNRMENCSPQPLQLKLVIPAT 133
G+ W +++D + + +YH + R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQVEYHADYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L S V +IG GG + +LR + A I + D P+R++T+S
Sbjct: 63 LRLLIPSKV----AGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTIS--------- 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
+ + V N + +LE+ E + +++++ + G
Sbjct: 110 -------------SDLPTVLQVLNEVVPNLEENGSRHGSDE------IDVRMLVHQSQAG 150
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG KIK++R+ +GA +++ S P ST+R++++ G P+T + I ++ +
Sbjct: 151 CIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPNTCIECIRELIATIKTSP 210
Query: 197 LQVVKGAVIPYEPKTMN 213
L KG PY+P +
Sbjct: 211 L---KGVNNPYDPHNFD 224
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQY 348
T++ + D+AG +IGK G+R+ ++R SGA I I + S+ ++ I G + +AQY
Sbjct: 394 TQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMAQY 453
Query: 349 LINMCI 354
L+ +
Sbjct: 454 LLQQSV 459
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ +R SGA + + + L S +RI+T+ G P I A Y
Sbjct: 395 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 453
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
I +R L H S + C+IG GG ++ LR+++GA+I I CP DR++++ G +
Sbjct: 138 IDVRMLVHQS----QAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPN 193
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYH 110
E T + V+N +NF +DY+
Sbjct: 194 TCIECIRELIATIKTSPLKGVNNPYDPHNF-----DDYY 227
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFH 335
++ G G D ++ +++ AGC+IGK G ++ E+R+ +GA+I I++ H
Sbjct: 126 LEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRL 185
Query: 336 IQGCQEAVSLAQYLINMCIE 355
I C + N CIE
Sbjct: 186 ISICGKP--------NTCIE 197
>gi|260941532|ref|XP_002614932.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
gi|238851355|gb|EEQ40819.1| hypothetical protein CLUG_04947 [Clavispora lusitaniae ATCC 42720]
Length = 370
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 18/182 (9%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVD 71
LI R L V+ E CLIG G ++ +R E+ + I+ +RI+TVSG VD
Sbjct: 16 LINFRVL----VSAKEAGCLIGQNGAVIDSIRDETATRAGISQLRPGTHERILTVSGLVD 71
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+++ + Y L S + + F + + +R+ N Q L++++P
Sbjct: 72 SAAKA---LSYFAQALVNASSETPFSYSYFPLKQM-------SRIANVEGQTTVLRMMVP 121
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI--C 189
+ G+LIG G +I+ I+ ++ V+ L S+ER+V + G D + A+ + C
Sbjct: 122 NSQIGTLIGARGLRIQQIQRQCNVSMIVSKSFLAGSSERLVELQGTVDNLYDAVRIVGRC 181
Query: 190 LV 191
L+
Sbjct: 182 LL 183
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLIN 351
+ DDI G +IGK GSR+ +R++SGA I I + ++ F I G AV A+ L+
Sbjct: 216 VSFRDDIVGALIGKHGSRIQGVRKVSGATIAISEEDGTGERSFTISGSPSAVGKAKRLLA 275
Query: 352 MCIELQKNNTTN 363
+E ++ +
Sbjct: 276 FNLEREEQRRAD 287
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P + ++++ A G LIG+ G I IRD + + S + P + ERI+TV G D+
Sbjct: 14 PGLINFRVLVSAKEAGCLIGQNGAVIDSIRDETATRAGI-SQLRPGTHERILTVSGLVDS 72
Query: 181 ISQAIYQICLVLIECT 196
++A+ L+ +
Sbjct: 73 AAKALSYFAQALVNAS 88
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 146/355 (41%), Gaps = 40/355 (11%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G ++++ +E+ A+I + DG PDRIV +SG + +
Sbjct: 74 CVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYM 133
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
S ++D V + + L D + + ++N ++L++ +T
Sbjct: 134 S------------PAMDAVLRVFRRVS-GLPDN--DDDDVQNAGSVFSSVRLLVASTQAI 178
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPDTISQAIYQIC--- 189
+LIGK G IK I + SGA+V++ S+ ERIV + G I +A+ I
Sbjct: 179 NLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHL 238
Query: 190 --LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
++ + + + + +T P+ S +T+ P + +++P
Sbjct: 239 RRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREP--- 295
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIV--------LTDDIA 299
L + + + P+ ++ S V S G V + V + A
Sbjct: 296 ---LFLERDSRVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYA 352
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
+IG G+ + IR+ SGA I I + I+G V A+ LI I
Sbjct: 353 EDIIGVEGANIAYIRRRSGATITIKESPHPDQITVEIKGTTSQVQTAEQLIQEFI 407
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 178/427 (41%), Gaps = 62/427 (14%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPG 84
N I +IG GG +++ +R+E+ +KI + D A P +R++ + S + +
Sbjct: 51 NVIGSVIGKGGKVIKSMRQETRSKIRVAD-AVPGVDERVIVIFSSPLSKDKEKDDD---- 105
Query: 85 HTLWVTSVDNVCTAYNFMCRS----LEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
+ VC A + + R +++ N + PQ +L++ + GSLIG
Sbjct: 106 --DDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQ--DARLLVANSQIGSLIG 161
Query: 141 KGGCKIKDIRDLSGANVQVA-SDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIE-- 194
KGG I+ +R SGA +Q+ D LP S + +V + G+ + +A+Y + L +
Sbjct: 162 KGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHP 221
Query: 195 CTLQVVKGAVIP------YEPKTMNAGPV--ILSGGQAYTLHGEYAVPVQEVAGKKQPHP 246
Q+ ++P P + P L G + H + P+ A +
Sbjct: 222 PKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQGDSLFGHHNLSAPILGYASR----- 276
Query: 247 LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKA 306
L GL G E + L+ AL + S S K T ++F ++ +D G VIGK
Sbjct: 277 LPGLGGYGSEAGSAWPLSNPALPSFS-KFGNSTTKKTSEEF-SIRVLCPNDKIGGVIGKG 334
Query: 307 GSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTS 365
G+ + +R +GA I + TES +++ + + A I + LQ + T
Sbjct: 335 GNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDRVSPTIEAVLLLQGKTSGTT- 393
Query: 366 DNPEPADLDAAISA-FMTASVNSSLIEKPTPHPGSMVTLGGLSELLANIAASNVKSTVQT 424
D D AIS F+ P+ H G ++ GG NI + K T
Sbjct: 394 ------DKDGAISTRFLV----------PSKHIGCLLGKGG------NIISEMRKQTRAN 431
Query: 425 TGAYRRD 431
+R+D
Sbjct: 432 IRIFRKD 438
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 22/242 (9%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTIS 182
+ ++P+ H G L+GKGG I ++R + AN+++ D P+ E +V V G P
Sbjct: 402 RFLVPSKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAK 461
Query: 183 QAIYQICLVLIECTLQVVKGA-----VIPYEPKTM-NAGPVILSGGQAYTLHGEYAVPVQ 236
A+ QI L E + GA V+P ++ +A P+ S G T + P
Sbjct: 462 DALIQILKRLRENIFKDKDGASNTDSVLPLSSLSVPSAVPLSSSYG---TRKYDIVSPRG 518
Query: 237 EVAGKKQPHPLAGLAVLGI--EGIGS-TSLTPAALAALSGSRVKSGGKDTGDDFVETEIV 293
+AG+ AGL+ G G GS SL P A G + SGG E
Sbjct: 519 AIAGRSA----AGLSGFGALQAGTGSYASLQPYAPTRTFGIGL-SGGHLNSSLAPSHEFA 573
Query: 294 LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQYLINM 352
+ + V+G+ GS + IR+ISGA + + T + ++ I G E AQ LI
Sbjct: 574 IPNSAVSSVLGRGGSNISHIREISGATVKLRDPITGASDRVVEISGTPEQSHAAQSLIQA 633
Query: 353 CI 354
+
Sbjct: 634 FM 635
>gi|195401727|ref|XP_002059464.1| GJ17213 [Drosophila virilis]
gi|194142470|gb|EDW58876.1| GJ17213 [Drosophila virilis]
Length = 511
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
DG D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 9 DGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 64
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S T +D+ M + E+
Sbjct: 65 RTIQIS----------------------TDIDSTLEIITEMLKYFEERD----------- 91
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+ ++L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 92 EEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 151
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ A+ ++ + + +KG + Y+P +
Sbjct: 152 VIDAVREVITLTRDTP---IKGPIHNYDPMNFD 181
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 44/233 (18%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S +
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYKASVSVPDSSGPERILSISADI- 94
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+V + + +LE+Y +C +L+L+I
Sbjct: 95 ------------------KTVGEILLK---IIPTLEEYQQYSGMDFDC-----ELRLLIH 128
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ GS+IG G KIK++R+ + ++++ + P ST+R+V V G + + + I + +
Sbjct: 129 QSLAGSIIGVKGAKIKELRENTKTSIKLFQECCPQSTDRVVLVGGKMERVVECIKTMLEL 188
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
+ + +KG PY+P + + Y +G + V +E G ++P
Sbjct: 189 IADAP---IKGRAQPYDPNFYD---------ETYE-YGGFTVMFEERVGGRRP 228
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 278 SGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKK 332
SGG+ D G V T++ + D+AG +IGK G R+ +IR SGA I I E S +
Sbjct: 345 SGGRCSYNDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGSEDR 404
Query: 333 MFHIQGCQEAVSLAQYLINMCI 354
+ I G Q+ + AQ+L+ +
Sbjct: 405 IITITGTQDQIQNAQFLLQSSV 426
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA +++ + L S +RI+T+ G D I A +
Sbjct: 362 QVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKI-DEPLEGSEDRIITITGTQDQIQNAQF 420
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 115 RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV 174
R NC + ++L++++ + + G++IGKGG IK +R A+V V P ERI+++
Sbjct: 35 RSRNCD-EMVELRILLQSKNAGAVIGKGGKNIKALRTDYKASVSVPDSSGP---ERILSI 90
Query: 175 HGNPDTISQAIYQICLVLIE 194
+ T+ + + +I L E
Sbjct: 91 SADIKTVGEILLKIIPTLEE 110
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
++ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADIETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LI--ECTLQVV 200
LI EC V+
Sbjct: 185 LISEECLFVVL 195
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 352 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 411
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 412 DQIQNAQYLLQNSVK 426
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 361 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 419
>gi|195336152|ref|XP_002034707.1| GM22026 [Drosophila sechellia]
gi|194126677|gb|EDW48720.1| GM22026 [Drosophila sechellia]
Length = 345
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
+G D K + T+R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 10 EGPQDQKRNRRNEETVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 65
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S ++ ++++ + + ED+ +
Sbjct: 66 RTIQISADIE------------------STLEIITEMLKYFEERDEDFDV---------- 97
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
+L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 98 -----RLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQSQ 152
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ +A+ ++ + + +KGA+ Y+P +
Sbjct: 153 VIEAVREVITLTRDTP---IKGAIHNYDPMNFD 182
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 35/197 (17%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L S V +IG GG + +LR + A I + D P+R++T+S
Sbjct: 77 LRLLIPSKV----AGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTIS--------- 123
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
+ + V N + +LE+ E + +++++ + G
Sbjct: 124 -------------SDLPTVLQVLNEVVPNLEENGSRHGSDE------IDVRMLVHQSQAG 164
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG KIK++R+ +GA +++ S P ST+R++++ G P+T + I ++ +
Sbjct: 165 CIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPNTCIECIRELIATIKTSP 224
Query: 197 LQVVKGAVIPYEPKTMN 213
L KG PY+P +
Sbjct: 225 L---KGVNNPYDPHNFD 238
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQY 348
T++ + D+AG +IGK G+R+ ++R SGA I I + S+ ++ I G + +AQY
Sbjct: 367 TQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMAQY 426
Query: 349 LINMCIE 355
L+ +
Sbjct: 427 LLQQSVH 433
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ +R SGA + + + L S +RI+T+ G P I A Y
Sbjct: 368 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 426
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVD 71
I +R L H S + C+IG GG ++ LR+++GA+I I CP DR++++ G +
Sbjct: 152 IDVRMLVHQS----QAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPN 207
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYH 110
E T + V+N +NF +DY+
Sbjct: 208 TCIECIRELIATIKTSPLKGVNNPYDPHNF-----DDYY 241
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFH 335
++ G G D ++ +++ AGC+IGK G ++ E+R+ +GA+I I++ H
Sbjct: 140 LEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRL 199
Query: 336 IQGCQEAVSLAQYLINMCIE 355
I C + N CIE
Sbjct: 200 ISICGKP--------NTCIE 211
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 51/190 (26%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVT 65
ED ++ ++ L S+ + LIG GG +R L+ ESG ++ ++ +RI
Sbjct: 30 EDNMVQVKVLIPSAA----VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICL 85
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL- 124
V G + + V V +V LE R +++N +P +
Sbjct: 86 VKGKIAS----------------VLKVSDVI---------LEKI---REKVDNNTPSDIF 117
Query: 125 ---------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASDMLPMSTERI 171
++KLV+P T G +IGK G +IK+IR+ +GAN+QV S +S ERI
Sbjct: 118 DHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERI 177
Query: 172 VTVHGNPDTI 181
+T+ D +
Sbjct: 178 ITIAAEQDEV 187
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 143/343 (41%), Gaps = 72/343 (20%)
Query: 43 RLRKESGAKISITDGA--CPDRIVTVSGS--VDNSSTSSVETGYPGHTLWVTSVDNVCTA 98
++R+E+GA I + D C +R++ VS VD+ + ++E H + TS ++
Sbjct: 21 QIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVL--HLQFKTSEKSI--- 75
Query: 99 YNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ 158
E + + ++P+ G L+GKGG I ++R + AN++
Sbjct: 76 ------------------EEGKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIR 117
Query: 159 VAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA 214
+ S D +P E +V V G D +A+ QI L + V + NA
Sbjct: 118 IMSKDNIPKCAGENEELVQVIGEVDVAREALIQIATRL--------RSNVFKDQDGGSNA 169
Query: 215 GPVILSGGQAYTLHGEYAVPVQEVAGKKQ---PHPLAGLAVLGIEGIGSTSLTPAA---- 267
G V+ + +L+G VP + + L LG+EG S + A+
Sbjct: 170 GSVVPP---SLSLYGR-GVPDSGFGRGDELGSTGRMYSLPSLGLEGTASGRYSSASYGSL 225
Query: 268 -------------LAALSGSRVKSGGKDTG--DDFVETEIVLTDDIAGCVIGKAGSRLLE 312
++ S SR +GG G E+ + + G ++G+ GS + +
Sbjct: 226 GGVQNGGAGGYGSFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQ 285
Query: 313 IRQISGAQINIHT----GTESHKKMFHIQGCQEAVSLAQYLIN 351
IR+ISGA++ +H GT+ ++ I G E AQ L+
Sbjct: 286 IREISGAKVKLHESKPGGTD---RVVEISGTPEQTHAAQSLLQ 325
>gi|240992417|ref|XP_002404460.1| transformation upregulated nuclear protein, putative [Ixodes
scapularis]
gi|215491567|gb|EEC01208.1| transformation upregulated nuclear protein, putative [Ixodes
scapularis]
Length = 316
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 18/117 (15%)
Query: 106 LEDY--HINRN-RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD-----LSGANV 157
L+D+ H +N R E+ +++L++ +H G +IG+ GC+IK++R+ L+GAN
Sbjct: 52 LDDFAQHTGQNGRSES------EMRLLMHQSHAGCVIGRAGCRIKELREVGSSVLTGANN 105
Query: 158 QVAS-DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
Q + P STERIV V G+P + I QIC ++ E VKG PY+P +
Sbjct: 106 QGGTGSCCPGSTERIVKVTGSPSVVVDCIKQICDIIAEAP---VKGLNKPYDPHNFD 159
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 23/175 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I ++LR E+ AKI I + C +R+VT+ + ++T
Sbjct: 47 RKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTID-------- 98
Query: 86 TLWVTSVDNVCTAYNFMCRSLE----DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
+ D VC A + + R E D + E SPQ + ++L++P+ G +IGK
Sbjct: 99 ----GAEDEVCPAQDALFRVHERLASDEGLGNEDSEEISPQ-VTVRLLVPSDQIGCIIGK 153
Query: 142 GGCKIKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQICLVL 192
GG I+ IR +GA ++V S D +P +S + ++ + G+ + +A++Q+ L
Sbjct: 154 GGQIIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTVVVRKALHQVSSRL 208
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 35/194 (18%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGA--KISITDGACP---DRIVT 65
ED + ++ L S +IG GG + +L+KE+GA K+S ++ P +RIV
Sbjct: 62 EDGQLLLKVLIPSYA----AGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVV 117
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
++GS D S SV H + + + A +S + + N NR + Q
Sbjct: 118 ITGSED--SLKSV------HKFLM---EKIGQAPRPPAKSPSEQNANNNRAK-------Q 159
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM-----LPMSTERIVTVHGNPDT 180
+K+V+P + G +IGKGG IK I + +G+ VQ++ LP ER++T+ G P+
Sbjct: 160 VKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATSGINLP---ERVITITGEPEQ 216
Query: 181 ISQAIYQICLVLIE 194
+A I ++E
Sbjct: 217 NDKACAFIVNKIVE 230
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQ 337
D + VE E+ +++ G ++GK G L+E ++ SGA+I I E ++ + I
Sbjct: 423 DGSKNVVELEV--PENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTIT 480
Query: 338 GCQEAVSLAQYLINMCI 354
G A AQYL+ I
Sbjct: 481 GTPAATQTAQYLVRARI 497
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
++L +P G+++GKGG + + ++ SGA +Q++ + P + R VT+ G P
Sbjct: 429 VELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQT 488
Query: 184 AIYQI 188
A Y +
Sbjct: 489 AQYLV 493
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 147/366 (40%), Gaps = 68/366 (18%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG---- 57
D D + D++ +R L V+ C+IG GG + + +SGA+I ++
Sbjct: 36 DPAADHEDDKEKPTHLRFL----VSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFF 91
Query: 58 -ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRM 116
DRI+ VSG L+ D V A + L ++
Sbjct: 92 PGTNDRIIMVSG------------------LF----DEVVKAMELVLEKL----LSEGEE 125
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTV 174
N + + +LV+P + CG +IGKGG IK + S A ++++ + +R+VT+
Sbjct: 126 SNEAEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDNNFVGLHDRLVTI 185
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP 234
G ++ +AI+ I L E + Y P + P G +Y AVP
Sbjct: 186 TGPLNSQMRAIHLILSKLSED---------VHYPPNLSSPFPYAGLGFPSYPA----AVP 232
Query: 235 VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALS---GSRVKSGGKDTGDDFVETE 291
V + P P G G + + G+ V+S +D E+
Sbjct: 233 VGYMI---PPVPYNNTVNYGPNGYAAPGGGGGGGRYQNNKPGTPVRS---PANNDAQESH 286
Query: 292 IV-LTDDIAGCVIGKAGSRLLEIRQISGAQINIH------TGTESHKKMFHIQGCQEAVS 344
+ + D+ G V+G+AG + EI Q SGA+I I GT K I G EA+
Sbjct: 287 TIGVADEHIGAVVGRAGRNITEIIQASGARIKISDRGDFIAGTSDRK--VTITGSSEAIQ 344
Query: 345 LAQYLI 350
A+ +I
Sbjct: 345 AAEAMI 350
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 51/190 (26%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVT 65
ED ++ ++ L S+ + LIG GG +R L+ ESG ++ ++ +RI
Sbjct: 30 EDNIVQVKVLIPSAA----VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICL 85
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL- 124
V G + + V V +V LE R +++N +P +
Sbjct: 86 VKGKIAS----------------VLKVSDVI---------LEKI---REKVDNNTPSDIF 117
Query: 125 ---------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASDMLPMSTERI 171
++KLV+P T G +IGK G +IK+IR+ +GAN+QV S +S ERI
Sbjct: 118 DHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERI 177
Query: 172 VTVHGNPDTI 181
+T+ D +
Sbjct: 178 ITIAAEQDEV 187
>gi|344300226|gb|EGW30566.1| hypothetical protein SPAPADRAFT_63402 [Spathaspora passalidarum
NRRL Y-27907]
Length = 317
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
Q LKL++P G +IGK G K ++I + S A ++ A LP ST+R+++V G D I
Sbjct: 4 QQYNLKLLVPHPMIGFIIGKQGLKFREIEESSAAKLRAAEQPLPYSTDRVLSVTGVADAI 63
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAG 215
A+Y I V+IE + K ++ Y P + G
Sbjct: 64 HIAVYYIAQVMIEHKDCLKKNKIVYYNPSNYHHG 97
>gi|268567874|ref|XP_002640100.1| Hypothetical protein CBG12588 [Caenorhabditis briggsae]
Length = 398
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 33/185 (17%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPG 84
V+ +IG GG ++RLR E A + + D P+R+ TV
Sbjct: 56 VSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTV------------------ 97
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
T +V N+ + + R LED R+ P +++++I +H G+LIG+ G
Sbjct: 98 -TADEKTVLNILK--DVLPR-LEDNFSERD--------PCEVRVLIHQSHAGALIGRNGT 145
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
KIK++R+ A +++ + P ST+R++ G + I ++ L E +KG+
Sbjct: 146 KIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIP---IKGSA 202
Query: 205 IPYEP 209
PY P
Sbjct: 203 TPYLP 207
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLI 350
++ + D+ G +IG+ G R+ IRQ SGAQI + +++ I+G ++ + AQYL+
Sbjct: 321 QVTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSNGQPERIITIKGTEQQIHSAQYLL 380
Query: 351 NMCI 354
C+
Sbjct: 381 QQCV 384
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 31/180 (17%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVT 65
ED ++ ++ L S+ + LIG GG +R L+ ESG ++ ++ +RI
Sbjct: 52 EDNIVQVKVLIPSAA----VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICL 107
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
V G + S ++ VDN + F + +E + +
Sbjct: 108 VKGKI----ASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKN--------------E 149
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASDMLPMSTERIVTVHGNPDTI 181
+KLV+P T G +IGK G +IK+IR+ +GAN+QV S +S ERI+T+ D +
Sbjct: 150 MKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEV 209
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 90/197 (45%), Gaps = 35/197 (17%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L S V +IG GG + +LR + A I + D P+R++T+S
Sbjct: 84 LRLLIPSKV----AGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTIS--------- 130
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
+ + V N + +LE+ E + +++++ + G
Sbjct: 131 -------------SDLPTVLQVLNEVVPNLEENGSRHGSDE------IDVRMLVHQSQAG 171
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG KIK++R+ +GA +++ S P ST+R++++ G P T + I ++ +
Sbjct: 172 CIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPTTCIECIRELIATIKTSP 231
Query: 197 LQVVKGAVIPYEPKTMN 213
L KG PY+P +
Sbjct: 232 L---KGVNNPYDPHNFD 245
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQY 348
T++ + D+AG +IGK G+R+ ++R SGA I I + S+ ++ I G + +AQY
Sbjct: 410 TQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMAQY 469
Query: 349 LINMCI 354
L+ +
Sbjct: 470 LLQQSV 475
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ +R SGA + + + L S +RI+T+ G P I A Y
Sbjct: 411 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 469
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
I +R L H S + C+IG GG ++ LR+++GA+I I CP DR++++ G
Sbjct: 159 IDVRMLVHQS----QAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICG 211
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/99 (21%), Positives = 49/99 (49%)
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFH 335
++ G G D ++ +++ AGC+IGK G ++ E+R+ +GA+I I++ H
Sbjct: 147 LEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRL 206
Query: 336 IQGCQEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLD 374
I C + + + + + ++ + ++ +P + D
Sbjct: 207 ISICGKPTTCIECIRELIATIKTSPLKGVNNPYDPHNFD 245
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 127/333 (38%), Gaps = 67/333 (20%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
C+IG GG + + +SGA+I ++ DRI+ VSG
Sbjct: 54 CIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSG------------------ 95
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
L+ D V A + L N E P+ ++LV+P + CG +IGKGG I
Sbjct: 96 LF----DEVIKAMELILEKLLAEGEESNEAE-ARPK---VRLVVPNSSCGGIIGKGGSTI 147
Query: 147 KDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K + S A ++++ + +R+VTV G D +AIY I L E
Sbjct: 148 KSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSED--------- 198
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH-PLAGLAVLGIEGIGSTSL 263
+ Y P + P G +Y VPV G P P G G G
Sbjct: 199 VHYPPNLSSPFPYAGLGFPSYP-----GVPV----GYMIPQVPYNNAVNYGPNGYGGRYQ 249
Query: 264 TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ D D I + D+ G V+G+AG + EI Q SGA+I I
Sbjct: 250 NNKPSTPMR----SPANNDAQDSLT---IGIADEHIGAVVGRAGRNITEIIQASGARIKI 302
Query: 324 H------TGTESHKKMFHIQGCQEAVSLAQYLI 350
GT K I G EA+ A+ +I
Sbjct: 303 SDRGDFIAGTSERK--VTITGTSEAIQAAESMI 333
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTV 174
E+ +P L+ ++ T G +IGKGG I + + SGA +Q++ + P + +RI+ V
Sbjct: 34 EDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMV 93
Query: 175 HGNPDTISQAIYQICLVLI 193
G D + +A+ I L+
Sbjct: 94 SGLFDEVIKAMELILEKLL 112
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 34/204 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTV 66
D+ T+ ++ + +I +IG GG I ++LR +S + I I++ A P +R+VT+
Sbjct: 1 DQHTVTNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISE-AMPGYDERVVTI 59
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN--FMCRS---LEDYH-------INRN 114
+SS ET L+ + + VC A + FM ED + +
Sbjct: 60 F-------SSSEET-----NLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEED 107
Query: 115 RMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM----LPMSTER 170
R Q + +++++P G +IGKGG I++IR + A +++ D L +ST+
Sbjct: 108 RFGEV--QQVTVRMLVPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDE 165
Query: 171 IVTVHGNPDTISQAIYQICLVLIE 194
++ +HG P + +A+YQ+ L E
Sbjct: 166 LLLIHGEPSVVRKALYQVATRLHE 189
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTIS 182
+L++ + G L+GKGG I ++R+L+ AN+++ S D LP + +V + G+ + S
Sbjct: 337 RLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVAS 396
Query: 183 QAIYQICLVL 192
A+ Q+ L L
Sbjct: 397 NALLQVILRL 406
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 97/385 (25%), Positives = 154/385 (40%), Gaps = 80/385 (20%)
Query: 27 VNE-ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYP 83
+NE + +IG GG +R L+ E+GA I I + +R+V +S +NS
Sbjct: 4 LNEMVGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISAR-ENSDM-------- 54
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
+ + D V Y+ I+ M+ SP P +L++P+ H G L+GKGG
Sbjct: 55 ---MHSPAQDAVVRVYS---------RISEASMDRSSPTPA--RLLVPSQHIGCLLGKGG 100
Query: 144 CKIKDIRDLSGANVQV-ASDMLPMSTER---IVTVHGNPDTISQAIYQICLVLIECTLQV 199
I ++R ++GA++++ ++ +P +R +V V G+ +I A+ I + + L
Sbjct: 101 SIITEMRKITGASIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPK 160
Query: 200 --VKGAVIPYEP--------KTMNAGPVIL--SGGQ-AYTLHG-EYAVPVQEV-AGKKQP 244
G + PY P P L SGG Y +H P+ G +P
Sbjct: 161 PHPSGGMPPYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAPMGHFETGDHRP 220
Query: 245 HPLAGLAVLG------------------IEGIGSTSLTP---------------AALAA- 270
P+ + +G +E + P A LA
Sbjct: 221 PPVHSMEYMGADRMPYSYGGEQGGPRPFLEQPSPRTWPPEAPRTNSEAPRNMPDAVLATD 280
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH 330
L V S + TE+V+ G V G +GS + EIRQ+SGA I +H
Sbjct: 281 LRKGPVASENQVATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGD 340
Query: 331 -KKMFHIQGCQEAVSLAQYLINMCI 354
+ I G E AQ LI+ I
Sbjct: 341 TNSIVVICGDPEQTKKAQSLIHAFI 365
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++VIP + G + G G +I++IR +SGA++ V D P T IV + G+P+ +A
Sbjct: 301 EVVIPCKYIGFVCGNSGSEIEEIRQMSGASITV-HDPKPGDTNSIVVICGDPEQTKKA-Q 358
Query: 187 QICLVLIECTLQ 198
+ I C LQ
Sbjct: 359 SLIHAFIFCGLQ 370
>gi|402862105|ref|XP_003895410.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Papio anubis]
Length = 123
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
+S G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++
Sbjct: 35 QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQIT 94
Query: 336 IQGCQEAVSLAQYLIN 351
I G +SLAQYLIN
Sbjct: 95 ITGTPANISLAQYLIN 110
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 82 YPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
+PG L + S + A N M +S + SP +L IP G +IG+
Sbjct: 16 FPGEKLPLHSSEE---AQNLMGQS---------SGLDASPPASTHELTIPNDLIGCIIGR 63
Query: 142 GGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
G KI +IR +SGA +++A + S+ER +T+ G P IS A Y I
Sbjct: 64 QGTKINEIRQMSGAQIKIA-NATEGSSERQITITGTPANISLAQYLI 109
>gi|359324036|ref|XP_003640271.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Canis lupus familiaris]
Length = 464
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ L + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P T+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ ++ D+AG +IGK G R+ ++R SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
S ++ I G Q+ + A YL+ ++ N
Sbjct: 430 SEDRVITITGTQDQIQNAPYLLQNSVKQYAN 460
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ I GS+IGKGG +IK +R SGA++++ + L S +R++T+ G D I A Y
Sbjct: 391 QVTISKDLAGSIIGKGGRRIKQVRHESGASIKI-DEPLEGSEDRVITITGTQDQIQNAPY 449
>gi|359324034|ref|XP_003640270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Canis lupus familiaris]
Length = 466
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 96/208 (46%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ L + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALHTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P T+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ ++ D+AG +IGK G R+ ++R SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + A YL+ ++
Sbjct: 430 SEDRVITITGTQDQIQNAPYLLQNSVK 456
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ I GS+IGKGG +IK +R SGA++++ + L S +R++T+ G D I A Y
Sbjct: 391 QVTISKDLAGSIIGKGGRRIKQVRHESGASIKI-DEPLEGSEDRVITITGTQDQIQNAPY 449
Query: 187 QICLVLIECTLQVVK 201
L++ +++ VK
Sbjct: 450 -----LLQNSVKHVK 459
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 127/333 (38%), Gaps = 67/333 (20%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
C+IG GG + + +SGA+I ++ DRI+ VSG
Sbjct: 24 CIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSG------------------ 65
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
L+ D V A + L + N + +++LV+P + CG +IGKGG I
Sbjct: 66 LF----DEVIKAMELILEKL----LAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTI 117
Query: 147 KDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K + S A ++++ + +R+VTV G D +AIY I L E
Sbjct: 118 KSFIEDSHAGIKISPQDNNFVGLHDRLVTVTGPLDHQMRAIYLILSKLSED--------- 168
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH-PLAGLAVLGIEGIGSTSL 263
+ Y P + P G +Y VPV G P P G G G
Sbjct: 169 VHYPPNLSSPFPYAGLGFPSYP-----GVPV----GYMIPQVPYNNAVNYGPNGYGGRYQ 219
Query: 264 TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ D D I + D+ G V+G+AG + EI Q SGA+I I
Sbjct: 220 NNKPSTPMR----SPANNDAQDSLT---IGIADEHIGAVVGRAGRNITEIIQASGARIKI 272
Query: 324 H------TGTESHKKMFHIQGCQEAVSLAQYLI 350
GT K I G EA+ A+ +I
Sbjct: 273 SDRGDFIAGTSERK--VTITGTSEAIQAAESMI 303
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
+P L+ ++ T G +IGKGG I + + SGA +Q++ + P + +RI+ V G D
Sbjct: 9 KPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFD 68
Query: 180 TISQAIYQICLVLI 193
+ +A+ I L+
Sbjct: 69 EVIKAMELILEKLL 82
>gi|154794961|gb|ABS86516.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 252
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 12/203 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 52 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 111
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS--GG--QAYTLHGEYAVPVQEVAGK 241
++I L+E + G V+ Y+P + V + GG G
Sbjct: 112 HEIGKCLME-DWERAHGTVL-YQPGALGPDGVTAAYPGGVLAGGFGVGGQGYGNGGGRRA 169
Query: 242 KQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIA-- 299
P G + G + + T + +G R + + V ++ T +I+
Sbjct: 170 GSGVPSGGHMSGDVPGRRNHNGTYHSNGNENGHRSRENSLASAPAPVADRLLRTQNISIP 229
Query: 300 ----GCVIGKAGSRLLEIRQISG 318
GC+IGK G+++ EIR++SG
Sbjct: 230 ADMVGCIIGKGGAKINEIRRMSG 252
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 35/197 (17%)
Query: 17 MRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTS 76
+R L S V +IG GG + +LR + A I + D P+R++T+S
Sbjct: 49 LRLLIPSKV----AGSIIGKGGQNITKLRSQYKASIIVPDCPGPERVLTIS--------- 95
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
+ + V N + +LE+ E + +++++ + G
Sbjct: 96 -------------SDLPTVLQVLNEVVPNLEENGSRHGSDE------IDVRMLVHQSQAG 136
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG KIK++R+ +GA +++ S P ST+R++++ G P T I ++ +
Sbjct: 137 CIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPSTCIDCIRELIATIKTSP 196
Query: 197 LQVVKGAVIPYEPKTMN 213
L KG PY+P +
Sbjct: 197 L---KGMNNPYDPHNFD 210
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ IR SGA + + + LP S +RI+T+ G P I A Y
Sbjct: 389 QVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI-DEPLPGSNDRIITITGLPSQIQMAQY 447
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
+ G + T++ + D+AG +IGK G+R+ +IR SGA I I S+ ++ I G
Sbjct: 380 NMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITGLP 439
Query: 341 EAVSLAQYLINMCIE 355
+ +AQYL+ +
Sbjct: 440 SQIQMAQYLLQQSVH 454
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
I +R L H S + C+IG GG ++ LR+++GA+I I CP DR++++ G
Sbjct: 124 IDVRMLVHQS----QAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICG 176
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
++ G G D ++ +++ AGC+IGK G ++ E+R+ +GA+I I++
Sbjct: 112 LEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYS 161
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/368 (23%), Positives = 143/368 (38%), Gaps = 63/368 (17%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSST 75
+F V V ++ +IG G ++++ +ES A+I I DG P+R V +S + +
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ----PL-QLKLVI 130
S +VD + + + L+ E PQ P+ +L++
Sbjct: 185 VS------------PAVDGLLRVHKRITDGLDS--------ETDQPQRGAGPVGPTRLLV 224
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQI 188
PA+ GSLIGK G IK I+D S +++ ++ P ++ +R+V + G P + +A+ I
Sbjct: 225 PASQAGSLIGKQGATIKSIQDASKCALRILENVPPVALNDDRVVEIQGEPLDVHKAVELI 284
Query: 189 C------------LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTL--------- 227
L L E ++V +P E P ++
Sbjct: 285 ASHLRKFLVDRSVLPLFEAQMKVHN---VPREQPMPAPQPWGPPPQWSHPPNIPPPGPGY 341
Query: 228 ----HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDT 283
H P HP+ GI G + P+ +SG++ G
Sbjct: 342 GGNPHFMPPRPQDNYYPPPDVHPVEKQPQYGISSYGRDA-PPSGAPPVSGNQHLPPGSSQ 400
Query: 284 GDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAV 343
++ + D VIG AG+ + IR+ SGA I+I G + + G V
Sbjct: 401 ITQTLQVPLSYAD----AVIGAAGASISYIRKHSGATISIQEGVPGEMNL-EMTGSASQV 455
Query: 344 SLAQYLIN 351
AQ LI
Sbjct: 456 QTAQQLIK 463
>gi|395325544|gb|EJF57965.1| hypothetical protein DICSQDRAFT_163181, partial [Dichomitus
squalens LYAD-421 SS1]
Length = 360
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 30/178 (16%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVD 71
+ T+R L V E + G G + +L++E+GA I+ ++ DRIV+V GSV
Sbjct: 211 VFTVRAL----VATTEARIIAGDGHENIPQLQEETGAYITFSEAVPGAADRIVSVCGSVK 266
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
V AY+ + L H R + SP + L++++P
Sbjct: 267 G----------------------VVKAYSLVAFQL--IHARLWRSCSSSPSSIALRVLVP 302
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
T S+ G I I++ SGA + + + LP S ER++ V+G+PDTI +A +IC
Sbjct: 303 HTLLYSVTGGDSVNIPVIQESSGAQLSIRKETLPQSLERLLEVNGSPDTIGRATERIC 360
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 147/349 (42%), Gaps = 53/349 (15%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTVSGS-VDNSST 75
+F V N+I +IG G + +LR+++GA+I I D P DR++ +S + T
Sbjct: 93 IVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEET 152
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHC 135
S+ E + + +V + + + H+ N M +L+I +
Sbjct: 153 SAAEQAL----IQIATVILEESGESSATAKVGTRHVGPNMM----------RLLIAGSQA 198
Query: 136 GSLIGKGGCKIKDIRDLSGANVQV-ASDMLPM-----STERIVTVHGNPDTISQAIYQIC 189
GSLIG G IK+IR+ SGA +++ ++ P+ T+R+V + G +SQ +
Sbjct: 199 GSLIGASGKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGE---VSQVLK--A 253
Query: 190 LVLIECTLQVVKGAVIPYEPK-TMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA 248
L I TL+ + P+ ++ P +G +G +P + G +
Sbjct: 254 LDHIGVTLR-------EHPPREVISTRPTYYAG--LSPANGLMVLPQTVLPGYNMQTGNS 304
Query: 249 GLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS 308
+ LG G + AA A V E+ + +AG VIGK G
Sbjct: 305 NYSYLGAAGRAAGGTISAAFALPK---------------VTVEMKIPSSVAGGVIGKRGD 349
Query: 309 RLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQ 357
+ +IR +SGA + + + + +G V+ AQ L+N I Q
Sbjct: 350 NISQIRSLSGAIVKVIGEKDGATRTIFFEGTAHQVATAQNLVNNHINAQ 398
>gi|238883031|gb|EEQ46669.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 365
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
D LI R L V+ E CLIG G ++ +R E+ K I+ +RI+TVSG
Sbjct: 66 DALINYRVL----VSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGK 121
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+D+ + + Y L +++ +YN+ L+ N E L+L+
Sbjct: 122 LDDCAKA---LSYFAQALINANIE----SYNYF--PLKQLSSTPNTEETTI-----LRLL 167
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP + G+LIG G +I+ +++ ++ + LP S ER+V + G D + ++ I
Sbjct: 168 IPNSQMGTLIGSKGARIQQLQNNFNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIIS 227
Query: 190 LVLIE 194
LIE
Sbjct: 228 RCLIE 232
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I +DI G +IGK GSR+ +R++SGA I I E ++++F I G AV A+ +I
Sbjct: 288 ISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGENERVFTITGSSHAVDKAKQMI 347
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP---DTISQAIY 186
P G+LIGK G +I +R +SGA + + S+ + ER+ T+ G+ D Q IY
Sbjct: 290 FPNDIVGALIGKRGSRIDGVRKVSGAMIAI-SEAIEGENERVFTITGSSHAVDKAKQMIY 348
Query: 187 Q 187
Q
Sbjct: 349 Q 349
>gi|68473490|ref|XP_719303.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
gi|46441115|gb|EAL00415.1| hypothetical protein CaO19.13072 [Candida albicans SC5314]
Length = 369
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
D LI R L V+ E CLIG G ++ +R E+ K I+ +RI+TVSG
Sbjct: 68 DALINYRVL----VSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGK 123
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+D+ + + Y L +++ +YN+ L+ N E L+L+
Sbjct: 124 LDDCAKA---LSYFAQALINANIE----SYNYF--PLKQLSSTPNTEETTI-----LRLL 169
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP + G+LIG G +I+ +++ ++ + LP S ER+V + G D + ++ I
Sbjct: 170 IPNSQMGTLIGSKGARIQQLQNNFNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIIS 229
Query: 190 LVLIE 194
LIE
Sbjct: 230 RCLIE 234
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I +DI G +IGK GSR+ +R++SGA I I E ++++F I G AV A+ +I
Sbjct: 292 ISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGENERVFTITGSSHAVDKAKQMI 351
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP---DTISQAIY 186
P G+LIGK G +I +R +SGA + + S+ + ER+ T+ G+ D Q IY
Sbjct: 294 FPNDIVGALIGKRGSRIDGVRKVSGAMIAI-SEAIEGENERVFTITGSSHAVDKAKQMIY 352
Query: 187 Q 187
Q
Sbjct: 353 Q 353
>gi|68473725|ref|XP_719187.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
gi|46440993|gb|EAL00294.1| hypothetical protein CaO19.5627 [Candida albicans SC5314]
Length = 368
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
D LI R L V+ E CLIG G ++ +R E+ K I+ +RI+TVSG
Sbjct: 67 DALINYRVL----VSAKEAGCLIGTNGQVIDSIRNETNTKAGISRLIPGSHERILTVSGK 122
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+D+ + + Y L +++ +YN+ L+ N E L+L+
Sbjct: 123 LDDCAKA---LSYFAQALINANIE----SYNYF--PLKQLSSTPNTEETTI-----LRLL 168
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP + G+LIG G +I+ +++ ++ + LP S ER+V + G D + ++ I
Sbjct: 169 IPNSQMGTLIGSKGARIQQLQNNFNISMIASKSFLPGSNERLVELQGTVDDLYDSLRIIS 228
Query: 190 LVLIE 194
LIE
Sbjct: 229 RCLIE 233
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I +DI G +IGK GSR+ +R++SGA I I E ++++F I G AV A+ +I
Sbjct: 291 ISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEAIEGENERVFTITGSSHAVDKAKQMI 350
Score = 38.1 bits (87), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP---DTISQAIY 186
P G+LIGK G +I +R +SGA + + S+ + ER+ T+ G+ D Q IY
Sbjct: 293 FPNDIVGALIGKRGSRIDGVRKVSGAMIAI-SEAIEGENERVFTITGSSHAVDKAKQMIY 351
Query: 187 Q 187
Q
Sbjct: 352 Q 352
>gi|367015444|ref|XP_003682221.1| hypothetical protein TDEL_0F01990 [Torulaspora delbrueckii]
gi|359749883|emb|CCE93010.1| hypothetical protein TDEL_0F01990 [Torulaspora delbrueckii]
Length = 345
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 14/218 (6%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+ R L ++ E + +IG G ++R R+ + KI +++ C DR+++ +G++ N
Sbjct: 27 ISHRALL----SLRESAKVIGTKGHTIQRSREVNHVKIGLSEKQPGCSDRVLSCAGTIAN 82
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ----LKL 128
+ + G TL + + + + L +R E + L+ L+L
Sbjct: 83 VANA---LGDMVDTLNDSDNETEMESERYSFHFLNHILPAPSREEIKDAEQLKNIGTLRL 139
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
++ + S+IGKGG KIK + D G + + D LP S ER++ + G P +I+ A+ +I
Sbjct: 140 LVTNSQLSSIIGKGGNKIKSLIDRHGVKIVASRDFLPDSDERVLEMQGFPGSITSALVEI 199
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT 226
+L+ + + + Y P + ++ G +T
Sbjct: 200 SEILLN-EMDIAFASERRYYPHLRKSNSSVIGKGSEHT 236
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 61/314 (19%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSGSVDNSSTSSVETGY--P 83
+I +IG GG I+++LR ++ +KI + T C +R+VT+ D ++ Y P
Sbjct: 51 RKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISP 110
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
D V ED + + SPQ + KL++P+ G +IGKGG
Sbjct: 111 AQDALFRVHDKVIA---------EDLQVEDD--SEGSPQ-VTAKLLVPSDQIGCIIGKGG 158
Query: 144 CKIKDIRDLSGANVQVASD-MLP---MSTERIVTVHGNPDTISQAIYQICLVLIECTLQV 199
+++IR +GA +++ D LP +S++ +V + G + +A+YQI L + +
Sbjct: 159 QIVQNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRS 218
Query: 200 VKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVL------ 253
+ ++A P + S V + G P+ G+A L
Sbjct: 219 --------QHLLVSAVPNVYSS-------------VGSLVGPSAAAPIVGIAPLMGPYGG 257
Query: 254 --GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
G G S SL A L+ +F + T +I G VIGK G+ +
Sbjct: 258 FKGDTGDWSRSLYSAPRDELASK-----------EFSLRVVCPTANI-GAVIGKGGTIIN 305
Query: 312 EIRQISGAQINIHT 325
+IRQ SGA I + +
Sbjct: 306 QIRQESGATIKVDS 319
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 98 AYNFMCRSLEDYHINRNRMENC---------SPQPLQLKLVIPATHCGSLIGKGGCKIKD 148
+Y S DY I N+ N Q + + PA GS+IG+GG IK
Sbjct: 7 SYGKRAHSQSDYDIGGNKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIGRGGEIIKQ 66
Query: 149 IRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+R + + ++V + +P ER+VT++ D ++
Sbjct: 67 LRIDTKSKIRVG-ETVPGCEERVVTIYSPSDETNE 100
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 163/374 (43%), Gaps = 55/374 (14%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G ++++ +E+ A+I + DGA DRIV +SG D +
Sbjct: 46 CVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPL 105
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATHC 135
S ++D V + + E D + + CS ++L++ +T
Sbjct: 106 S------------PAMDAVIRVFKRVSGFSEIDAKNKASAVAFCS-----VRLLVASTQA 148
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLV 191
+LIGK G IK I++ +GA+V+V S D +P + ERIV + G + +A+ +
Sbjct: 149 INLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGH 208
Query: 192 LIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA 251
L + +V +V+P KT NA I QA T V + QP + +
Sbjct: 209 LRKF---LVDNSVLPLFEKTYNA--TISQERQADTTW----VDKPSLHSASQPSIVTDIP 259
Query: 252 V--------LGIEGIGSTSLTPAAL------AALSGSRVKSGGKDTGDDFVETEIVLTDD 297
+ E + L P+ + ++LSG R + + + V T ++ T
Sbjct: 260 LSTKRDSLFADRESQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIV-TTVIQTMQ 318
Query: 298 I----AGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMC 353
I A +IG G+ + IR+ SGA + + + + I+G V AQ LI
Sbjct: 319 IPLSYAEDIIGIQGTNIEYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQTAQQLIQEV 378
Query: 354 IELQKNNTTNTSDN 367
I N+T + N
Sbjct: 379 I---SNHTEPVASN 389
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 148/371 (39%), Gaps = 84/371 (22%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTV 66
++++ + M CL + + +IG GG +R L+ E+GA + + D +RI+ +
Sbjct: 248 VEQEIVFRMICLN------DMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVI 301
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
S ++ S S D + Y+ I+ M+ S P
Sbjct: 302 SARENSEMMRS------------PSQDALLRVYS---------KISEASMDKSSSVPA-- 338
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPMSTER---IVTVHGNPDTIS 182
+L++PA H G L+GKGG I ++R L+GA++++ ++ +P +R +V V G+ +I
Sbjct: 339 RLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQ 398
Query: 183 QAIYQIC---LVLIECTLQVVKGAVIPYEP-------KTMNAGPVILSGGQ-AYTLHGEY 231
A+ I LI G + PY P ++ P SGG Y +H
Sbjct: 399 DALLHITGRIRDLIIPPKPHPSGGMPPYPPVGNPSHHQSRQEAPSHHSGGMPPYPMHPFR 458
Query: 232 AVP--------------------VQEVAGKKQPHPLA---GLAVLGIEGIGSTSLTPAAL 268
P ++ + + P+P G +E + P A
Sbjct: 459 PNPPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTWAPEAP 518
Query: 269 A---------ALSGSRVKSGGKDTGDDFVE------TEIVLTDDIAGCVIGKAGSRLLEI 313
A + + G + ++ V TE+V+ G V G GS L EI
Sbjct: 519 ATDAPRSMPDTVPAVDFRKGPVSSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEI 578
Query: 314 RQISGAQINIH 324
++ISGA I +H
Sbjct: 579 KKISGAAITVH 589
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 9/76 (11%)
Query: 300 GCVIGKAGSRLLEIRQISGAQINIHTGTE-------SHKKMFHIQGCQEAVSLAQYLINM 352
GCV+GK G + +RQ SGAQI + E ++ HI G A A L++
Sbjct: 122 GCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSFSAARKALLLVST 181
Query: 353 CIELQKNNTTNTSDNP 368
C LQ N +TS+ P
Sbjct: 182 C--LQDNPRPDTSNFP 195
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 94/172 (54%), Gaps = 25/172 (14%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I ++LR ++ AKI I + AC +R++T+ S + T+++E
Sbjct: 49 RKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSS--SRETNTIED----- 101
Query: 86 TLWVTSVDNVCTAYNFMCR-----SLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
+ D VC A + + R + +D +N+ E+ + ++L++P+ G +IG
Sbjct: 102 -----TEDKVCPAQDALFRVHEKLATDDGPVNKENEESLGQ--VTVRLLVPSDQIGCIIG 154
Query: 141 KGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQI 188
KGG I+ IR +G+ ++V S + LP+ S + ++ + G+P + +A+ Q+
Sbjct: 155 KGGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDPMVVRKALLQV 206
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM----LPMSTERIVTVHGNPDTIS 182
+L++ + G LIGKGG I +IR S AN+++ S + E +V + G+ D
Sbjct: 368 RLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDEEMVLISGDLDFAR 427
Query: 183 QAIYQICLVLIECTLQVVKGA------VIPYEP 209
A+ QI L + +GA VIPY P
Sbjct: 428 HALLQITTRL-KANFFEREGALSGFPPVIPYHP 459
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 157/389 (40%), Gaps = 94/389 (24%)
Query: 20 LFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSS 77
+F V V ++ +IG G V+R+ +E+ ++I I +G +RIV VS D +
Sbjct: 11 VFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAA-- 68
Query: 78 VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-----------PLQL 126
+ A + R ++R +E P+ P+
Sbjct: 69 -----------------ISPAMEGLLR------VHRRVIEGAEPESADAEIAPGGAPVSS 105
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLP---MSTERIVTVHGNPDTI 181
+L++ AT GSLIG+ G IK I+D SGA V+V A++ LP ++ +R+V V G P +
Sbjct: 106 RLLVAATQAGSLIGRQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNV 165
Query: 182 SQAIYQICLVLIECTLQVVKGAVIP-YEPKTMNAGPVILSGGQAY--------------- 225
+A LV+ +V +V+P +E +N S Q+
Sbjct: 166 QRATE---LVVAHLRKFLVDRSVLPLFE---LNRAVANQSNQQSTASQWQQPSSTQQQQP 219
Query: 226 --------TLHGEYAVPVQEVAGKKQPHPLA----GLAVLGIE-GIGSTSLTPAALAALS 272
+ +G +P ++Q H LA GL++ G + +G T + P ++
Sbjct: 220 PNYSSNDSSYYGAAELP-HHSQPQQQSHDLANHHHGLSLYGRDPTLGGTIVPPTPAPVIT 278
Query: 273 GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKK 332
V + + A +IG AG+ + +R+ SGA I I +
Sbjct: 279 Q--------------VTQHMQIPLSYADAIIGGAGANISYMRRTSGATITIQETRSVPGE 324
Query: 333 M-FHIQGCQEAVSLAQYLINMCIELQKNN 360
M I G V AQ LI + L ++
Sbjct: 325 MTVEIHGSASQVQTAQQLIQVKCRLWRDR 353
>gi|154794957|gb|ABS86514.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 255
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 53 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 112
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTM 212
++I L+E + G V+ Y+P +
Sbjct: 113 HEIGKCLME-DWERAHGTVL-YQPGAL 137
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 145/370 (39%), Gaps = 83/370 (22%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTV 66
++++ + M CL + + +IG GG +R L+ E+GA + + D +RI+ +
Sbjct: 153 VEQEIVFRMICL------NDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVI 206
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
S +NS + S D + Y+ I+ M+ S P
Sbjct: 207 SAR-ENSEM-----------MRSPSQDALLRVYS---------KISEASMDKSSSVPA-- 243
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPMSTER---IVTVHGNPDTIS 182
+L++PA H G L+GKGG I ++R L+GA++++ ++ +P +R +V V G+ +I
Sbjct: 244 RLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQ 303
Query: 183 QAIYQIC---LVLIECTLQVVKGAVIPYEP-------KTMNAGPVILSGG-QAYTLHGEY 231
A+ I LI G + PY P ++ P SGG Y +H
Sbjct: 304 DALLHITGRIRDLIIPPKPHPSGGMPPYPPVGNPSHHQSRQEAPSHHSGGMPPYPMHPFR 363
Query: 232 AVP--------------------VQEVAGKKQPHPLA---GLAVLGIEGIGSTSLTPAAL 268
P ++ + + P+P G +E + P A
Sbjct: 364 PNPPMGPFDVADPRPPGPPPSHPMEHMGADRMPYPYGCEQGGPRPFVEQPSPRTWAPEAP 423
Query: 269 AA--------------LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIR 314
A V S + TE+V+ G V G GS L EI+
Sbjct: 424 ATDAPRSMPDTVPAVDFRKGPVSSENQVATPATTTTEVVIPCKYIGFVCGTNGSDLDEIK 483
Query: 315 QISGAQINIH 324
+ISGA I +H
Sbjct: 484 KISGAAITVH 493
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 140/343 (40%), Gaps = 92/343 (26%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ VSG++ N +VE
Sbjct: 49 SVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAI-NEIQRAVEL------ 101
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ + L + H + +N + +++LV+P CG +IGKGG I
Sbjct: 102 --------------ILSKLLSELH---SEDDNDAEPKTKVRLVVPNGSCGGIIGKGGVTI 144
Query: 147 KDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
+ + S A ++++ + +R+V + G D +AI I L E
Sbjct: 145 RSFIEDSQAGIKISPQDNNYYGQNDRLVMLTGTFDEQMRAIELIVSKLAED--------- 195
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGST--- 261
P+ ++MN+ P G+ G +G+ T
Sbjct: 196 -PHYAQSMNS-----------------------------PFSYPGVYFSGYQGVPYTYVL 225
Query: 262 -SLTPAALAAL-------SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEI 313
S+ P A A+ +G ++++ ++ + + + D+ G V+G+ G ++EI
Sbjct: 226 PSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLT---MGVADEHIGLVVGRGGRNIMEI 282
Query: 314 RQISGAQINIH------TGTESHKKMFHIQGCQEAVSLAQYLI 350
Q+SGA+I I +GT K I G Q A+ A+ +I
Sbjct: 283 SQVSGARIKISDRGDYISGTTDRK--VTITGSQRAIRTAESMI 323
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 137/340 (40%), Gaps = 86/340 (25%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ VSG++ N +VE
Sbjct: 49 SVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAI-NEIQRAVEL------ 101
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ + L + H + +N + +++LV+P CG +IGKGG I
Sbjct: 102 --------------ILSKLLSELH---SEDDNDAEPKTKVRLVVPNGSCGGIIGKGGATI 144
Query: 147 KDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
+ + S A ++++ + +R+VT+ G+ D +AI I L E
Sbjct: 145 RSFIEDSQAGIKISPQDNNYYGQNDRLVTLTGSFDEQMRAIELIVSKLSED--------- 195
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGST--- 261
P+ ++MN+ P G+ G +G+ T
Sbjct: 196 -PHYAQSMNS-----------------------------PFSYPGVYFSGYQGVPYTYVL 225
Query: 262 -SLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT----DDIAGCVIGKAGSRLLEIRQI 316
S+ P A A++ + G + E LT D+ G V+G+ G ++EI Q
Sbjct: 226 PSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQA 285
Query: 317 SGAQINIH------TGTESHKKMFHIQGCQEAVSLAQYLI 350
SGA+I I +GT K I G Q A+ A+ +I
Sbjct: 286 SGARIKISDRGDYVSGTTDRK--VTITGSQRAIRTAESMI 323
>gi|154794972|gb|ABS86520.1| hypothetical protein [Melampsora medusae f. sp. deltoidis]
Length = 259
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+++++ GS+IG+ G KIK+I+D SG + + +MLP STER+V V G+P+ I AI
Sbjct: 58 IRVLVSHNLMGSIIGRQGSKIKEIQDTSGVRMVASKEMLPQSTERVVEVQGSPEAIRVAI 117
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTM 212
++I L+E + G V+ Y+P +
Sbjct: 118 HEIGKCLME-DWERAHGTVL-YQPGAL 142
>gi|50308995|ref|XP_454503.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74636673|sp|Q6CNI6.1|HEK2_KLULA RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|49643638|emb|CAG99590.1| KLLA0E12321p [Kluyveromyces lactis]
Length = 383
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSV 78
FH V++ E + +IGP G + +R+E+ KI I+ + +C DR++ VSG + S
Sbjct: 61 FHVLVSLKEAAKIIGPQGNTIETIRRENDIKIGISPREKSCSDRLLNVSGPPRQVANSL- 119
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ----LKLVIPATH 134
G L V + D + F ++ +E+ P+ + L+L+
Sbjct: 120 -----GQVLRVLTTDYEPEEHVFKHLRFMLPPASKEEIED--PEKWKQIGNLRLICTNPQ 172
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
S+IG+ G KIK + + + + LP S +R++ + G P +++ I +I + I+
Sbjct: 173 ISSVIGQQGAKIKKLIETHTVKLVASKHFLPDSKDRVLEIQGFPTSVANCINEIAELFIQ 232
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILS 220
+ V + Y P + + + +S
Sbjct: 233 DDVHVPPRTLPRYYPHSKHTKEIQVS 258
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 163/377 (43%), Gaps = 64/377 (16%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I G P+R ++G+
Sbjct: 72 LVHQRAVMTEEYKVPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMPERPCVLTGT 131
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N M+ S +++
Sbjct: 132 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFH---NDMDGNS---TVQEIL 169
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G + + D LP ++ + + G+P + QA +
Sbjct: 170 IPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQARDLV 229
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK- 242
++ E +G + + + G V +S G +GE +Q AG +
Sbjct: 230 LEIIREKDQADFRGIRSDFSSR-IGGGSVEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRI 288
Query: 243 QPHPLAGLA------VLGIEGIGS-----------TSLTPAALAALSGSRVKSGGKDTGD 285
Q P G++ V+G+ + T+ AL+ +R + G+ GD
Sbjct: 289 QFKPDDGISPERAAQVMGLPDLCQHAAHIINELILTAQERDGFGALALARGR--GRSRGD 346
Query: 286 DFVET-----EIVLT--DDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMF 334
+ T EI T D G VIGK G + I Q SGA + + T+ ++F
Sbjct: 347 WNLSTPGSMQEITYTVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPGVRIF 406
Query: 335 HIQGCQEAVSLAQYLIN 351
I+G + + LA++LI+
Sbjct: 407 TIRGVPQQIELARHLID 423
>gi|367006831|ref|XP_003688146.1| hypothetical protein TPHA_0M01370 [Tetrapisispora phaffii CBS 4417]
gi|357526453|emb|CCE65712.1| hypothetical protein TPHA_0M01370 [Tetrapisispora phaffii CBS 4417]
Length = 339
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/351 (20%), Positives = 146/351 (41%), Gaps = 84/351 (23%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGS 69
D +I+ R L +++E +IG G + ++++++ I+I+D C DR++T +G
Sbjct: 21 DHVISQRLLL----SLDEAGAIIGQQGATIEKIKEDNNVTINISDSKPNCSDRVLTSTGK 76
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTA---------YNFMCRSLEDYHINRNRMENCS 120
+ + + S G L T+V++ + Y F+ + + + +E
Sbjct: 77 IQDVANS---IGDVCRVLASTAVEDSESEEKVSSEVSPYFFL-----RFRLPKPSVEEMK 128
Query: 121 PQPLQLK------LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV 174
P +LK +++ + C ++IGK G +IK + G + ++ LP S ER++ +
Sbjct: 129 ETPDKLKDIVNIRVLVTRSQCSAIIGKNGDRIKSYINDFGVKMLATNNFLPRSNERLLEI 188
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP 234
G P I++ VL V K V P P EY P
Sbjct: 189 QGFPVAITK-------VLTAVDTLVAKEVVPPTNP------------------AREYYTP 223
Query: 235 VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVL 294
+ + G + G S +R ++ + TG++F + + +
Sbjct: 224 YNRNSSQ------------GAQSTG------------SANRTRTPIRRTGEEFKKL-VNI 258
Query: 295 TDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-----KKMFHIQGCQ 340
+ G ++G++G+R+ +R+ + I+I +E +++F I G +
Sbjct: 259 PETYVGAIVGRSGNRIANLRRATRTSIDIGKRSEEEVASETERVFEIVGSR 309
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 23/171 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I ++LR E+ AKI I + C +R++T+ S ++T
Sbjct: 47 RKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTID-------- 98
Query: 86 TLWVTSVDNVCTAYNFMCRSLE----DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
+ D VC A + + R E D E SPQ + ++L++P+ G ++GK
Sbjct: 99 ----DAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQ-VTVRLLVPSDQIGCILGK 153
Query: 142 GGCKIKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQI 188
GG I+ IR +GA ++V S D +P +S + ++ + G+ + +A+ Q+
Sbjct: 154 GGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQV 204
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGN 177
Q +L++ + G LIGKGG I +IR S AN+++ S + E +V + G
Sbjct: 363 QSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGG 422
Query: 178 PDTISQAIYQICLVLI------ECTLQVVKGAVIPYEP 209
D A+ QI L E +L +VIPY P
Sbjct: 423 LDVARHALVQIATRLKANFFEREGSLSAFP-SVIPYHP 459
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 23/171 (13%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I ++LR E+ AKI I + C +R++T+ S ++T
Sbjct: 47 RKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTID-------- 98
Query: 86 TLWVTSVDNVCTAYNFMCRSLE----DYHINRNRMENCSPQPLQLKLVIPATHCGSLIGK 141
+ D VC A + + R E D E SPQ + ++L++P+ G ++GK
Sbjct: 99 ----DAEDKVCPAQDALFRVHERLATDESFGNEDSEEISPQ-VTVRLLVPSDQIGCILGK 153
Query: 142 GGCKIKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQI 188
GG I+ IR +GA ++V S D +P +S + ++ + G+ + +A+ Q+
Sbjct: 154 GGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKALCQV 204
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 11/98 (11%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGN 177
Q +L++ + G LIGKGG I +IR S AN+++ S + E +V + G
Sbjct: 363 QSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGG 422
Query: 178 PDTISQAIYQICLVLI------ECTLQVVKGAVIPYEP 209
D A+ QI L E +L +VIPY P
Sbjct: 423 LDVARHALVQIATRLKANFFEREGSLSAFP-SVIPYHP 459
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 28/188 (14%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSG 68
EDT+ C V +I +IG GG IV++LR ++ +KI I T +R++T+
Sbjct: 41 EDTVYRYLC------PVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYS 94
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP---QPLQ 125
+ ++ T+S+E S D V A + + + D + + M+ S +
Sbjct: 95 A--SNETNSLEE----------SSDYVSPAQEALFK-IHDRVVADDYMDEDSEGGGHQVT 141
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTI 181
+L++P+ G +IGKGG +++IR +GA V++ D LP +S++ +V + G P +
Sbjct: 142 ARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIV 201
Query: 182 SQAIYQIC 189
+A+YQI
Sbjct: 202 KKALYQIA 209
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTVSGS--VDNSSTSSVETGYPGH 85
I +IG GG I+ ++R+E+ A I + A D ++ +S ++S + ++E
Sbjct: 282 IGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQ 341
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V+ +F R L++P + G LIGKGG
Sbjct: 342 PRCSEKVERDSGIISFTTR-----------------------LLVPTSRIGCLIGKGGAI 378
Query: 146 IKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVK 201
I ++R L+ AN+++ S + LP + + +V + G+ D +A+ I L L +
Sbjct: 379 ITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRL-RANLFDRE 437
Query: 202 GA------VIPYEPKTMNAGPVILSGGQAYTLHGE 230
GA V+PY P + + + G+ HG
Sbjct: 438 GALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGR 472
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 97/188 (51%), Gaps = 28/188 (14%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRIVTVSG 68
EDT+ C V +I +IG GG IV++LR ++ +KI I T +R++T+
Sbjct: 41 EDTVYRYLC------PVKKIGSVIGRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYS 94
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP---QPLQ 125
+ ++ T+S+E S D V A + + + D + + M+ S +
Sbjct: 95 A--SNETNSLEE----------SSDYVSPAQEALFK-IHDRVVADDYMDEDSEGGGHQVT 141
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTI 181
+L++P+ G +IGKGG +++IR +GA V++ D LP +S++ +V + G P +
Sbjct: 142 ARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIV 201
Query: 182 SQAIYQIC 189
+A+YQI
Sbjct: 202 KKALYQIA 209
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP--DRIVTVSGS--VDNSSTSSVETGYPGH 85
I +IG GG I+ ++R+E+ A I + A D ++ +S ++S + ++E
Sbjct: 282 IGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQ 341
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V+ +F R L++P + G LIGKGG
Sbjct: 342 PRCSEKVERDSGIISFTTR-----------------------LLVPTSRIGCLIGKGGAI 378
Query: 146 IKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVK 201
I ++R L+ AN+++ S + LP + + +V + G+ D +A+ I L L +
Sbjct: 379 ITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVTRL-RANLFDRE 437
Query: 202 GA------VIPYEPKTMNAGPVILSGGQAYTLHGE 230
GA V+PY P + + + G+ HG
Sbjct: 438 GALSAVLPVLPYLPLSADGSDSLSYDGREGKRHGR 472
>gi|402862107|ref|XP_003895411.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Papio anubis]
Length = 103
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYL
Sbjct: 29 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYL 88
Query: 350 IN 351
IN
Sbjct: 89 IN 90
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ SP +L IP G +IG+ G KI +IR +SGA +++A + S+ER +T+ G
Sbjct: 20 DASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIA-NATEGSSERQITITGT 78
Query: 178 PDTISQAIYQI 188
P IS A Y I
Sbjct: 79 PANISLAQYLI 89
>gi|158293805|ref|XP_315123.4| AGAP005015-PA [Anopheles gambiae str. PEST]
gi|157016622|gb|EAA10478.5| AGAP005015-PA [Anopheles gambiae str. PEST]
Length = 447
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 90/178 (50%), Gaps = 35/178 (19%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG +++LR E A++++ D P+R++T+ G ++ VT
Sbjct: 69 AIIGKGGHNIQKLRTEYQAQVNVGDCTGPERVLTIGGDMET----------------VTK 112
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
V + M H++R +L+++I + G +IG+GG KIK+I+D
Sbjct: 113 V-----VKDVM------KHLDR-----AGDNEYELRILIHLSLAGCVIGRGGSKIKEIKD 156
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
G +++ S++ P ST+RI V G+ + + + +I + LI+ T +KG V Y+P
Sbjct: 157 EIGCRLKIFSNIPPQSTDRIAQVIGSEEQCLKTLNEI-IKLIKGT--PIKGPVHNYDP 211
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
+++L+IP+ G++IGKGG I+ +R A V V P ER++T+ G+ +T+++
Sbjct: 57 EVRLLIPSKMAGAIIGKGGHNIQKLRTEYQAQVNVGDCTGP---ERVLTIGGDMETVTKV 113
Query: 185 IYQICLVL 192
+ + L
Sbjct: 114 VKDVMKHL 121
>gi|395325545|gb|EJF57966.1| hypothetical protein DICSQDRAFT_149459 [Dichomitus squalens
LYAD-421 SS1]
Length = 324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 42/187 (22%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
+T+R L V+ E +IG + R+++E+G +++ D+I+ V+G+V+
Sbjct: 10 LTVRAL----VSNTEAEIIIGDRHANIHRVQEETGVYAGVSEAVRGVKDQILAVTGTVEG 65
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--------SPQP- 123
V A++ + YH+ R+E SP P
Sbjct: 66 ----------------------VVKAFSLVA-----YHLASLRVEPTDSSSESPLSPHPP 98
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+L++++P ++G+ G KIK I+D +GA++ V ML STE +V VHG+P+ I +
Sbjct: 99 TKLRILMPHRILPDVVGRDGKKIKAIQDSTGASLGVTGKMLLRSTECLVAVHGSPEAIGK 158
Query: 184 AIYQICL 190
A+ QI +
Sbjct: 159 AVEQIVM 165
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 140/341 (41%), Gaps = 89/341 (26%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ VSG++ N +VE
Sbjct: 49 SVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAI-NEVLRAVEL------ 101
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ + L + H + +N +++L++P CG +IGKGG I
Sbjct: 102 --------------ILSKLLSELH---SEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATI 144
Query: 147 KDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
+ + S A ++++ + +RIVTV G T+ + + I L+ V K A
Sbjct: 145 RSFIEESQAGIKISPQDNSYYGQNDRIVTVTG---TLDEQMRGIDLI-------VSKLAE 194
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLT 264
P+ +M++ P +G V G +G+ T +
Sbjct: 195 DPHYSHSMSS-----------------------------PFTYSGAYVSGYQGVPYTYVL 225
Query: 265 PA-ALAALSGSRVKSGGKDTGDDFVETE--------IVLTDDIAGCVIGKAGSRLLEIRQ 315
P+ A A +G + G TG F ++ I + D+ G V+G+ G + +I Q
Sbjct: 226 PSVAPPAYNGVNYRPNG--TGAKFQNSKEDRSNSMTIGVADEHIGLVVGRGGRNISDISQ 283
Query: 316 ISGAQINIH------TGTESHKKMFHIQGCQEAVSLAQYLI 350
SGA+I I +GT K I G Q A+ A+ +I
Sbjct: 284 TSGAKIKISDRGDYISGTTDRK--VTITGSQRAIRTAESMI 322
>gi|375065844|ref|NP_001243477.1| heterogeneous nuclear ribonucleoprotein K [Canis lupus familiaris]
Length = 464
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKKFGGNTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE- 328
+ +G R G D G + T++ + D+AG +IGK G R+ +IR SGA I I E
Sbjct: 372 SYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 329 SHKKMFHIQGCQEAVSLAQYLINMCIE 355
S ++ I G Q+ + AQYL+ ++
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
>gi|395322965|gb|EJF55518.1| hypothetical protein DICSQDRAFT_175811 [Dichomitus squalens
LYAD-421 SS1]
Length = 280
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 102/225 (45%), Gaps = 38/225 (16%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTV 66
D+ + I +R L V ++G + RL++E+G S+++ A P ++++ V
Sbjct: 7 DQRSAIVIRAL----VGKKHAQVILGKNSVNLMRLQEETGVTASLSE-AIPGVGEQVLRV 61
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYH-INRNRMENCSPQPLQ 125
GSV++++ AY + L H + +E+ S
Sbjct: 62 LGSVESATE----------------------AYFLIASDLIRTHPLRSTSVESDSAPTTC 99
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L+IP GS+IG+ G KIK + SGA + MLP STE I+ + G ++I +A+
Sbjct: 100 LRLLIPHNMLGSIIGRHGRKIKAMHASSGAQISTREHMLPNSTEHIMQLCGTSESIRRAV 159
Query: 186 YQICLVLIE----CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT 226
ICL +E C V+ P +P + P +G + +T
Sbjct: 160 RDICLCFLEDDELCAGTVLFHPAAPDQPSSPVTQP---TGTRPFT 201
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 140/326 (42%), Gaps = 27/326 (8%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTV 66
D D L+ R L V I +IG G ++ +R ES A++ + D GA R++T+
Sbjct: 31 DNDELVVYRILCPDEV----IGSVIGKSGKVINSIRNESRARVKVVDPFPGAM-YRVITI 85
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
+V + V+ + + D + + + ++ + R + +
Sbjct: 86 YCNVKEKGDADVDDDFHQADPLCPAQDALLKVHAAISNAVAALGDSDKRCRDKK----EC 141
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASD---MLPMSTERIVTVHGNPD 179
++++P + ++IGK G IK +R + AN+++ ASD M + + + G +
Sbjct: 142 QILVPTSQSANIIGKAGATIKKLRSKTRANIKITAKDASDPTHSCAMDFDNFLLITGESE 201
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP--VILSGGQAYTLHGEYAVPVQE 237
+ +A++ + ++ + + + IP E A P +I S Y G Y
Sbjct: 202 AVKKALFAVSAIMYKFSPK----EEIPLETTVPEAPPSIIISSDVPIYQPGGFYPNADPI 257
Query: 238 VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDD 297
V+ + P L + +G G + + + + V S G + + + + D
Sbjct: 258 VSSRSVPPILGATHIPEFQGYGDMR-SSWPIYSSTVPVVPSFGNTSRSELIIRLLCPFDK 316
Query: 298 IAGCVIGKAGSRLLEIRQISGAQINI 323
I G VIGK GS + IRQ+SGA+I +
Sbjct: 317 I-GRVIGKGGSTIKSIRQVSGARIEV 341
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 153/366 (41%), Gaps = 73/366 (19%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR---IVTV-- 66
+ +I + C F ++I +IG GG ++ +R+ SGA+I + D DR I+TV
Sbjct: 305 ELIIRLLCPF------DKIGRVIGKGGSTIKSIRQVSGARIEVDDTKA-DRDECIITVIA 357
Query: 67 SGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL 126
+ S D+ + +VE L +++ ED I + +
Sbjct: 358 TESPDDLKSMAVE----AILLLQGKIND------------EDNDI------------VGI 389
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM--STERIVTVHGNPDTISQ 183
+ ++P+ G +IGK G + +IR + A+V ++ D L S + +V V G ++
Sbjct: 390 RFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKVDKLKCADSNDELVEVAGEVGSVRD 449
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP--------V 235
A+ QI L L + L+ G +N+ + Y +H ++P V
Sbjct: 450 ALVQIVLRLRDDVLKEKDGG--------LNSS---VGTDSVYPVHAGISIPSILPSVPPV 498
Query: 236 QEVAGKKQPHPLAGLAVLGIEGIGSTSLTP------AALAALSGSRVKSGGKDTGDDFVE 289
+ ++ +GL + + P +LA+ S S++ G
Sbjct: 499 APMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPS----T 554
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQY 348
E+++ + G VIGK G+ + IR+ISGA I I + ++ +I G E A+
Sbjct: 555 LEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGDRIAYISGKPEQKQAAEN 614
Query: 349 LINMCI 354
LI I
Sbjct: 615 LIQAFI 620
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 105 SLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDML 164
SL Y +++ + P P L++++PA G +IGKGG I +IR +SGA +++ SD
Sbjct: 536 SLASYSLSK--LYEGLPPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEI-SDAK 592
Query: 165 PMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+RI + G P+ QA + I T
Sbjct: 593 SARGDRIAYISGKPEQ-KQAAENLIQAFIMAT 623
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG- 176
N S L ++L+ P G +IGKGG IK IR +SGA ++V D E I+TV
Sbjct: 300 NTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEV-DDTKADRDECIITVIAT 358
Query: 177 -NPDTISQAIYQICLVL 192
+PD + + L+L
Sbjct: 359 ESPDDLKSMAVEAILLL 375
>gi|308499839|ref|XP_003112105.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
gi|308268586|gb|EFP12539.1| hypothetical protein CRE_29640 [Caenorhabditis remanei]
Length = 721
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 33/177 (18%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG GG ++RLR E A + + D P+R+ TV+ +V
Sbjct: 386 IIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEK-------------------TV 426
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
N+ + LED R+ P +++++I +H G+LIG+ G KIK++R+
Sbjct: 427 LNILRD---VLPRLEDNFSERD--------PCEVRMLIHQSHAGALIGRNGTKIKELREK 475
Query: 153 SGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
A +++ + P ST+R++ G + I ++ L E +KG+ PY P
Sbjct: 476 CSARLKIFTGCAPGSTDRVLITSGEQKNVLAIIEEVMKELKEIP---IKGSSTPYLP 529
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLIN 351
+ + D+ G +IG+ G R+ IRQ SGAQI + T +++ I+G + + AQYL+
Sbjct: 645 VTIPSDLGGTIIGRGGERIARIRQESGAQITLEPSTGQPERIITIKGTEPQIHSAQYLLQ 704
Query: 352 MCIE 355
C+
Sbjct: 705 QCVR 708
>gi|241956728|ref|XP_002421084.1| RNA-binding protein, putative [Candida dubliniensis CD36]
gi|223644427|emb|CAX41241.1| RNA-binding protein, putative [Candida dubliniensis CD36]
Length = 377
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 30/190 (15%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
D LI R L V+ E CLIG G ++ +R E+ K I+ +RI+TVSG
Sbjct: 78 DALINYRVL----VSAKEAGCLIGTNGQVIDSIRNETSTKAGISRLIPGSHERILTVSGK 133
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-----L 124
+D+ + + Y L +++N YN+ ++ S P
Sbjct: 134 LDDCAKA---LSYFAQALINGNIEN----YNYFP------------LKQLSSTPNTNDTT 174
Query: 125 QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L+IP + G+LIG G +I+ +++ ++ + LP S ER+V + G D + +
Sbjct: 175 ILRLLIPNSQMGTLIGFKGIRIQQLQNNYNISMIASKSFLPGSNERLVELQGTVDDLYDS 234
Query: 185 IYQICLVLIE 194
+ I LIE
Sbjct: 235 LRIISRCLIE 244
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLI 350
I +DI G +IGK GSR+ +R++SGA I I E ++++F I G +V A+ +I
Sbjct: 298 ISFPNDIVGALIGKRGSRIDGVRKVSGAMIAISEIIEGENERIFTITGSSHSVEKAKQMI 357
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 137/349 (39%), Gaps = 79/349 (22%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ +SGS+
Sbjct: 48 SVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKE-------------- 93
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-LKLVIPATHCGSLIGKGGCK 145
N + L+ H + + +P + ++LV+P + CG +IGKGG
Sbjct: 94 -----------VINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGAT 142
Query: 146 IKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
IK + S A ++++ + ++R+VT+ G T + + I L+L + T
Sbjct: 143 IKSFIEESKAGIKISPLDNTFYGLSDRLVTLSG---TFEEQMRAIDLILAKLTED----- 194
Query: 204 VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSL 263
+ + N +H Y+ +G P L + G S +
Sbjct: 195 ----DHYSQN-------------VHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNY 237
Query: 264 TPAALAALSGSRVKSGGK-DTGDDFVETEIVL--TDDIAGCVIGKAGSRLLEIRQISGAQ 320
P SGGK D T + + D+ G V+G+ G ++EI QI+GA+
Sbjct: 238 APNG----------SGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGAR 287
Query: 321 INIH------TGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
I I +GT K I G Q A+ A+ +I ++ T+
Sbjct: 288 IKISDRGDFMSGTTDRK--VSITGPQRAIQQAETMIKQKVDSATERATD 334
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVH 175
+ + +P ++ ++ GS+IGKGG I + + SGA +Q++ + P +T+RI+ +
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMIS 88
Query: 176 GNPDTISQAIYQICLVL 192
G +I + I + L+L
Sbjct: 89 G---SIKEVINGLELIL 102
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 139/346 (40%), Gaps = 73/346 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ +SGS+
Sbjct: 48 SVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKE-------------- 93
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-LKLVIPATHCGSLIGKGGCK 145
N + L+ H + + +P + ++LV+P + CG +IGKGG
Sbjct: 94 -----------VVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGIIGKGGAT 142
Query: 146 IKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
IK + S A ++++ + ++R+VT+ G T + + I L+L + T
Sbjct: 143 IKSFIEESKAGIKISPLDNTFYGLSDRLVTLSG---TFEEQMRAIDLILAKLTED----- 194
Query: 204 VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSL 263
+ + N +H Y+ +G P L + G S +
Sbjct: 195 ----DHYSQN-------------VHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNY 237
Query: 264 TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
P SG + ++ ++ I + D+ G V+G+ G ++EI Q++GA+I I
Sbjct: 238 APNG----SGGKYQNHKEEAS---TTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKI 290
Query: 324 H------TGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTN 363
+GT K I G Q A+ A+ +I ++ TT+
Sbjct: 291 SDRGDFMSGTTDRK--VSITGPQRAIQQAETMIKQKVDSATERTTD 334
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVH 175
+ + +P ++ ++ GS+IGKGG I + + SGA +Q++ + P +T+RI+ +
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMIS 88
Query: 176 GNPDTISQAIYQICLVL 192
G +I + + + L+L
Sbjct: 89 G---SIKEVVNGLELIL 102
>gi|410082165|ref|XP_003958661.1| hypothetical protein KAFR_0H01160 [Kazachstania africana CBS 2517]
gi|372465250|emb|CCF59526.1| hypothetical protein KAFR_0H01160 [Kazachstania africana CBS 2517]
Length = 359
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 88/205 (42%), Gaps = 36/205 (17%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDR 62
+ ID +I R L +++ + S +IG G + +R + KI I++ C DR
Sbjct: 32 NNASIDFQPIINHRIL----ISLQQASKIIGIKGTTISTIRTTNNVKIGISNKVSGCSDR 87
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
I++ SG+V N + + G + + + D + +H + N P
Sbjct: 88 ILSCSGNVINVANAL------GDIVDLLNRDKTSEPMKYH------FHF----LNNILPP 131
Query: 123 PL--------------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST 168
P LKL+I + S+IGKGG KIK + G + + D LP S
Sbjct: 132 PSLDEIKDLDQLNKIGNLKLIILNSQLSSIIGKGGSKIKSLISKHGVKLVASKDFLPDSN 191
Query: 169 ERIVTVHGNPDTISQAIYQICLVLI 193
ERI+ + G P I+ I I +LI
Sbjct: 192 ERILELQGFPGAITNTIIDINEILI 216
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 122/279 (43%), Gaps = 37/279 (13%)
Query: 99 YNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ 158
+ M +L+ H+ R LK++IP+ GS+IGKGG I ++ +GA ++
Sbjct: 6 FRSMFETLKGVHVTREEEGEYF-----LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK 60
Query: 159 VAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP-YEPKT-MN- 213
++ D P +TER+ V G + ++ I + E + K V+ +P+T MN
Sbjct: 61 LSKSKDFYPGTTERVCLVQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNP 120
Query: 214 --------------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIG 259
AG +I GG AV Q A + G+ + E +
Sbjct: 121 DRAKQAKLIVPNSTAGLIIGKGGATVK-----AVMEQSGAWVQLSQKPEGINLQ--ERVV 173
Query: 260 STSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGA 319
+ S P + + V+ ++ + VE I + +++ G ++GK G L+E ++++GA
Sbjct: 174 TVSGEPEQVHKAVSAIVQKLAAESAKELVE--IAVPENLVGAILGKGGKTLVEYQELTGA 231
Query: 320 QINIHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCI 354
+I I E + + I G A AQYLI+ +
Sbjct: 232 RIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQRV 270
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 77/173 (44%), Gaps = 36/173 (20%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S S D YPG T V
Sbjct: 39 SIIGKGGQTIVQLQKETGATIKL------------SKSKDF---------YPGTTERVCL 77
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 78 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 137
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQIC 189
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I
Sbjct: 138 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIV 190
>gi|385302954|gb|EIF47057.1| rna binding protein [Dekkera bruxellensis AWRI1499]
Length = 339
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 25/213 (11%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSV 70
TLIT R L V+ E +IG G + R+R ++ K ++ C DRI+ V+G V
Sbjct: 36 TLITYRVL----VSRREAGAIIGRNGDNITRIRNDNNVKAGVSKVVEGCIDRILIVTGMV 91
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMC--RSLEDYHINRNRMENCSPQP----- 123
DN + V ++ + + V A SL Y + P P
Sbjct: 92 DNVPNALVSIA---KSVAEANAETVRQANEKGTDPTSLITYEYFPLKPLTQRPGPNDPEY 148
Query: 124 ---LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
L L+L+IP G+LIGKGG +IK I++ + + L STER+V + G +
Sbjct: 149 AETLFLRLLIPNVQMGTLIGKGGSRIKGIQESCDVKMVASKGYLENSTERLVELLGREEN 208
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIP--YEPKT 211
+ +A+ +I L+ C Q GAV Y P T
Sbjct: 209 VRKALAEISRCLL-CDFQ---GAVTATFYTPST 237
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 11/163 (6%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH 85
++ LIG GG ++ +++ K+ + G +R+V + G +N + E
Sbjct: 162 QMGTLIGKGGSRIKGIQESCDVKMVASKGYLENSTERLVELLGREENVRKALAEIS---R 218
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
L V + S+ Y R R + + L K+ P + G+LIG+ G +
Sbjct: 219 CLLCDFQGAVTATFYTPSTSMPSYR--RRRENRTTGKELIRKISFPNEYIGALIGRRGSR 276
Query: 146 IKDIRDLSGANVQVASDMLPMSTE---RIVTVHGNPDTISQAI 185
I+++R S + + SD S E R VT+ G I QA+
Sbjct: 277 IQEVRRSSNCAIAIESDSQBGSEEGGVREVTLIGTKPNIDQAV 319
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 39/185 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDN 72
+T R L + + + +IG GG IVR L+ E+GA ISI C DR++T++ S +
Sbjct: 319 VTFRILCSN----DRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASENP 374
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-------DYHINRNRMENCSPQPLQ 125
S S P A RS+E D +N+ + +
Sbjct: 375 ESRYS-----PAQK----------AAVLVFSRSIEVGFEKGLDSGLNKGSI-------VT 412
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ-VASDMLPM---STERIVTVHGNPDTI 181
++LV+P++ G LIGKGG + ++R +GAN++ + +D +P +++V + G ++
Sbjct: 413 VRLVVPSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSV 472
Query: 182 SQAIY 186
A+Y
Sbjct: 473 QDALY 477
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTV------SGSVDN 72
F N + I +IG G +++ L++ +GAKI I D PDRI+ V SG +
Sbjct: 47 FRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKILL 106
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
+ +E L ++ + RS +R + + + +LV A
Sbjct: 107 RNEEVIEVSKAQEAL--------LKVFDRILRSG-----GGDRSVDVGDRVMSCRLVADA 153
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQIC 189
GS+IGKGG ++ I+ +G ++V +D LP+ +++ I+ + G ++ +A+ +
Sbjct: 154 AQAGSVIGKGGKVVERIKKETGCKIRVLTDDLPLCASASDEIIEIEGRVSSVKKALVAVS 213
Query: 190 LVLIEC 195
L +C
Sbjct: 214 QRLQDC 219
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
EIV+ DD CV G+ GS L +RQISGA + +H + ++ I G + AQ L
Sbjct: 642 EIVVPDDTIDCVYGENGSNLARLRQISGANVVVHEPRPGTSDRIIVISGTPDETQAAQSL 701
Query: 350 INMCI 354
+ I
Sbjct: 702 LQAFI 706
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 11/70 (15%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TD-----GA 58
D +++ +++T+R + SS ++ CLIG GG IV +RK +GA I I TD +
Sbjct: 402 DSGLNKGSIVTVRLVVPSS----QVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCAS 457
Query: 59 CPDRIVTVSG 68
D++V +SG
Sbjct: 458 DNDQVVQISG 467
>gi|194383878|dbj|BAG59297.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 11 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 66
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 67 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 126
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 127 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 186
Query: 182 SQA 184
+A
Sbjct: 187 FKA 189
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 130/333 (39%), Gaps = 66/333 (19%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
C+IG GG + + +SGA+I ++ DRI+ VSG
Sbjct: 59 CIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSG------------------ 100
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
L+ D V A + LE +P + +LV+P + CG +IGKGG I
Sbjct: 101 LF----DEVIKAMELV---LEKLLAEGEEFNEAEARP-KFRLVVPNSSCGGIIGKGGATI 152
Query: 147 KDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAV 204
K + S A ++++ + +R+VT+ G + +AIY I L E
Sbjct: 153 KAFIEDSHAGIKISPQDNNFVGLHDRLVTITGPFNNQMRAIYLILSKLSED--------- 203
Query: 205 IPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH-PLAGLAVLGIEGIGSTSL 263
+ Y P + P G +Y VPV G P P G G G
Sbjct: 204 VHYPPNLSSPFPYAGLGFPSYPA----PVPV----GYMIPQVPYNNAVNYGPNGYGGRYQ 255
Query: 264 TPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
G+ V+S T D I + D+ G V+G+AG + EI Q SGA+I I
Sbjct: 256 N-----NKPGTPVRSPA--TNDAQESHTIGVADEHIGAVVGRAGRNITEIIQASGARIKI 308
Query: 324 H------TGTESHKKMFHIQGCQEAVSLAQYLI 350
GT K I G EA+ A+ +I
Sbjct: 309 SDRGDFIAGTSDRK--VTITGTPEAIQAAESMI 339
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTV 174
E+ +P L+ ++ T G +IGKGG I D + SGA +Q++ + P + +RI+ V
Sbjct: 39 EDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 98
Query: 175 HGNPDTISQAIYQICLVLI 193
G D + +A+ + L+
Sbjct: 99 SGLFDEVIKAMELVLEKLL 117
>gi|291392572|ref|XP_002712680.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Oryctolagus
cuniculus]
Length = 469
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 25/199 (12%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS------GSVDN 72
C+ S N ++G GG ++ LR + A +S+ D + P+RI+++S G +
Sbjct: 46 CILLQSKNAG---AVLGKGGKTIKALRIDYNASVSVPDSSGPERILSISADTETVGEILK 102
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE--DYHINRNRMENCSPQPLQLKLVI 130
++E G L + S + ++E YH + +C +L+L+I
Sbjct: 103 KIIPTLEEG-----LQLPSP-TATSQLPLESDAVECLHYHHFKGSDFDC-----ELRLLI 151
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
G +IG G KIK++R+ + +++ + P ST+R+ + G PD + + I +I L
Sbjct: 152 HQRLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVALIRGKPDRVVECI-KIIL 210
Query: 191 VLIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 211 DLI--SESPIKGRAQPYDP 227
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 270 ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES 329
+ +G R G D G + T++ + D+AG +I K ++ +IR SGA I I E
Sbjct: 378 SYAGGRGSYG--DLGGPIITTQVTVPKDLAGFIICKGAQQIKQIRHESGASIKIDEPLEG 435
Query: 330 HK-KMFHIQGCQEAVSLAQYLINMCIE 355
K ++ I G Q+ + AQYL+ ++
Sbjct: 436 SKDRIITITGTQDQIQNAQYLLQNSVK 462
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W ++VD AY S DY R + + ++ +P
Sbjct: 344 GFSADETWDSAVDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTVPKD 403
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
G +I KG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 404 LAGFIICKGAQQIKQIRHESGASIKI-DEPLEGSKDRIITITGTQDQIQNAQY 455
>gi|45190789|ref|NP_985043.1| AER186Cp [Ashbya gossypii ATCC 10895]
gi|74693470|sp|Q756R8.1|HEK2_ASHGO RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|44983831|gb|AAS52867.1| AER186Cp [Ashbya gossypii ATCC 10895]
gi|374108267|gb|AEY97174.1| FAER186Cp [Ashbya gossypii FDAG1]
Length = 316
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 30/184 (16%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
E + ++G GG + +RK +G KI I+ + +C DR++ V+GS+D + S
Sbjct: 43 EAARILGRGGNTIDNIRKANGVKIGISTKEKSCSDRLLEVTGSIDAVANS---------- 92
Query: 87 LWVTSVDNVCTAYNFMCRSLE---DYHINRNRMENCSP-------QPLQ------LKLVI 130
+ V V TA + E + HI ++ P P++ L+L++
Sbjct: 93 --LADVVKVLTADDTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIV 150
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
+ S+IG G KIK + D + + V+ LP S +RI+ + G P++I+ I I
Sbjct: 151 TNSQVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQGFPNSIANCIKDISQ 210
Query: 191 VLIE 194
LI+
Sbjct: 211 TLIK 214
>gi|195029383|ref|XP_001987553.1| GH21981 [Drosophila grimshawi]
gi|193903553|gb|EDW02420.1| GH21981 [Drosophila grimshawi]
Length = 512
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 41/213 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD 61
DG D K + +R L SS+ +IG GG ++++R + A +S+ D P+
Sbjct: 9 DGPQDQKRNRRNEDMVRILIPSSI----AGAVIGKGGQHIQKMRTQYKATVSVDDSQGPE 64
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R + +S +D+ TL + + M + E+
Sbjct: 65 RTIQISADIDS-------------TLEIITE---------MLKYFEERD----------- 91
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDT 180
++L+I + G +IGKGG KIK+IRD G ++V S++ P ST+R+V G
Sbjct: 92 DEFDVRLLIHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQTQ 151
Query: 181 ISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
+ A+ ++ + + +KG + Y+P +
Sbjct: 152 VIDAVREVITLTRDTP---IKGPIHNYDPMNFD 181
>gi|366988525|ref|XP_003674029.1| hypothetical protein NCAS_0A10900 [Naumovozyma castellii CBS 4309]
gi|342299892|emb|CCC67648.1| hypothetical protein NCAS_0A10900 [Naumovozyma castellii CBS 4309]
Length = 378
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 38/213 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDN 72
I +R L +++ E + +IG G + ++R+ G KI I++ C DRI++ +G + N
Sbjct: 18 IVLRVL----LSLKEAAKIIGLKGSTISKIRETHGVKIGISEKVTGCSDRILSCAGPIIN 73
Query: 73 SSTSSV-------ETGYPGHTLWVTSVDNVCTAYNFMCRSL------------------- 106
+ + E Y + + ++F+ L
Sbjct: 74 VANALSDCVDILNEKDYDAEGNLLPPLKFEKYNFHFLNHLLPPPSRNEVLEEENGEEEND 133
Query: 107 ----EDYHINRNRMENCSP--QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
+ N +E+ P + L+L++P H S+IGKGG +IK + + G + +
Sbjct: 134 DGETKKQDANEANLEDQVPVDKIGNLRLIVPNRHLSSIIGKGGVRIKALIETYGVKIVAS 193
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
LP S+ER++ + G P +IS+ + +I +L+
Sbjct: 194 KHFLPDSSERVLEIQGFPASISKVLIEISEILL 226
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 18/166 (10%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSG----------SVDNSSTS 76
+S +IG GG ++ L + G KI + PD R++ + G + +
Sbjct: 168 LSSIIGKGGVRIKALIETYGVKIVASKHFLPDSSERVLEIQGFPASISKVLIEISEILLN 227
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYH--INRNRMENCSPQPLQLKLVIPATH 134
V+ + + + + +N S YH N + + +++++IP +
Sbjct: 228 DVDINFIPEKHYYPHLKHQSNGFNTRQESDTSYHPSSNNFENNSNNNDEFKVEVLIPEIY 287
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVA---SDMLPMSTERIVTVHGN 177
G+LIGK G +I +++D + + + + S+ RI T+ G+
Sbjct: 288 VGALIGKQGNRIANLKDFTKTKIIIERKDDESRDDSSNRIFTIIGH 333
>gi|302800040|ref|XP_002981778.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
gi|300150610|gb|EFJ17260.1| hypothetical protein SELMODRAFT_179092 [Selaginella moellendorffii]
Length = 310
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 34/169 (20%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYP 83
E +IG GG + L+ +SGA+I ++ DR+V +SG++++
Sbjct: 46 EAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAIND----------- 94
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
V TA N + ++ + ++ ++ +P QL+LV+P + CG++IGKGG
Sbjct: 95 -----------VLTALNLILSKIQKETEDDSQTDS---KPNQLRLVVPNSVCGAIIGKGG 140
Query: 144 CKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
IK + S A++++ S +L ++R+VT+ G +I Q + + L+L
Sbjct: 141 GTIKSFIEDSEASIKL-SGILQGISDRLVTITG---SIEQQLKAVELIL 185
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVE---------T 80
+IG GG ++ ++S A I ++ DR+VT++GS++ +VE +
Sbjct: 134 AIIGKGGGTIKSFIEDSEASIKLSGILQGISDRLVTITGSIEQQ-LKAVELILTKLLGDS 192
Query: 81 GYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
Y + S +C F L Y + +E+C P + L +P H G+++G
Sbjct: 193 SYLDYAAAPLSYTVIC----FKLFRLAPYPVLLPVLESC-PVTTSITLAVPDEHIGAIVG 247
Query: 141 KGGCKIKDIRDLSGANVQVA 160
+GG + +I+ SG ++++
Sbjct: 248 RGGKTLGEIQQASGVTIKIS 267
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
+ ++ GS+IGKGG I D++ SGA +Q+ + D P +T+R+V + G
Sbjct: 39 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSG 90
>gi|395323015|gb|EJF55548.1| hypothetical protein DICSQDRAFT_175774 [Dichomitus squalens
LYAD-421 SS1]
Length = 246
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 75 TSSVETGYPG---HTLWVT-SVDNVCTAYNFMCRSLEDYH-INRNRMENCSPQPLQLKLV 129
T+S+ PG L V SV++ AY + L H + +E+ S L+L+
Sbjct: 10 TASLSEAIPGVGEQVLRVLGSVESATEAYFLIASDLIRTHPLRSTSVESDSAPTTCLRLL 69
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQIC 189
IP GS+IG+ G KIK + SGA + MLP STE I+ + G ++I +A+ IC
Sbjct: 70 IPHNMLGSIIGRHGRKIKAMHASSGAQISTREHMLPNSTEHIMQLCGTSESIRRAVRDIC 129
Query: 190 LVLIE----CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT 226
L +E C V+ P +P + P +G + +T
Sbjct: 130 LCFLEDDELCAGTVLFHPAAPDQPSSPVTQP---TGTRPFT 167
>gi|349576348|dbj|GAA21519.1| K7_Hek2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 381
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 20 LFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSS 77
+F V +I +IG GG IV++LR ++ AKI I D C +R+VT+ S + ++
Sbjct: 45 VFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFD 104
Query: 78 VETG---YPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
ETG P V E H+ KL++P+
Sbjct: 105 -ETGDLVSPAQDALFRVHQRVIAEDAREDEDDERNHVT-------------AKLLVPSDQ 150
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQIC 189
G +IGKGG +++IR +GA +++ D LP +S + +V + G + +A++QI
Sbjct: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALFQIA 209
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 38/198 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPDR----IVTVSGSVDNSSTSSVETGYPGH 85
I +IG GG I+ ++R++SGA I + A I+++ ++S + ++E
Sbjct: 290 IGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQ 349
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V+ +F R L++P + G LIGKGG
Sbjct: 350 PRCSEKVERDSGIVSFTTR-----------------------LLVPTSRIGCLIGKGGTI 386
Query: 146 IKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL---- 197
+ ++R L+ AN+++ S + LP + +V + G+ D A+ Q L + L
Sbjct: 387 VTEMRRLTKANIRILSKENLPKIASEDDEMVQISGDLDVAKDALVQ-ALTRLRANLFDKE 445
Query: 198 QVVKG--AVIPYEPKTMN 213
+ V G V+PY P +++
Sbjct: 446 RAVSGFLPVLPYLPASVD 463
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 68/168 (40%), Gaps = 34/168 (20%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISI-TDGACP------DRIVTVSGSV---------- 70
++I C+IG GG IV+ +R E+GA+I I D P D +V +SG
Sbjct: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALFQI 208
Query: 71 -----DNSSTSS----------VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYH--INR 113
DN S S G PG + V AY D+ +
Sbjct: 209 AAQIRDNPSRSQHLLASAVPGGYAAGGPGAGAPIMGVAPFVGAYGGYKGDTGDWSRSLYP 268
Query: 114 NRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS 161
+ S + ++ V P + G +IGKGG I IR SGA ++V S
Sbjct: 269 APRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDS 316
>gi|51013079|gb|AAT92833.1| YBL032W [Saccharomyces cerevisiae]
Length = 381
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|6319439|ref|NP_009521.1| Hek2p [Saccharomyces cerevisiae S288c]
gi|586417|sp|P38199.1|HEK2_YEAST RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|332319676|sp|A6ZKR5.1|HEK2_YEAS7 RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|536039|emb|CAA84852.1| unnamed protein product [Saccharomyces cerevisiae]
gi|602889|emb|CAA54496.1| YBL0418 [Saccharomyces cerevisiae]
gi|151946362|gb|EDN64584.1| heterogeneous nuclear RNP K-like gene [Saccharomyces cerevisiae
YJM789]
gi|285810302|tpg|DAA07087.1| TPA: Hek2p [Saccharomyces cerevisiae S288c]
gi|392301184|gb|EIW12273.1| Hek2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 381
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 87 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 142
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 143 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 202
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 203 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 262
Query: 182 SQA 184
+A
Sbjct: 263 FKA 265
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 144/350 (41%), Gaps = 54/350 (15%)
Query: 12 DTLITMRCLFHSSVNVNEISC----LIGPGGCIVRRLRKESGAKISIT--DGACPDRIVT 65
D L+++R +SS +S +IG GG + RL+ E+G KI + G P+R T
Sbjct: 69 DPLLSLRG--NSSAADQPVSAAALGVIGRGGEQITRLQSETGCKIQMAAESGGMPERTCT 126
Query: 66 VSGSVD--NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
++GS D N + V++ V +++ N + + P
Sbjct: 127 LTGSRDAVNRAKELVQSIV---NQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHP 183
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
++++IP G +IGKGG IK +++ SGA + V D E+ + + G+P +
Sbjct: 184 GFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEH 243
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQ 243
A + ++ E +Q+ N G S +++ G +G+ +
Sbjct: 244 AKQLVYELIAEKEMQLY------------NRGTRNFSSNNSFSQDGN------SESGEDR 285
Query: 244 PHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
G V G P+ + G+R GK VE + + G +I
Sbjct: 286 ----RGNGVTG---------RPSEYGSWEGNRPAGEGK------VEFSYPVPSNKCGIII 326
Query: 304 GKAGSRLLEIRQISGAQINI---HTGTESHKKMFHIQGCQEAVSLAQYLI 350
GK G + EI Q +GA + + GT++ K F I+G E V A+ +
Sbjct: 327 GKGGVTIKEINQQTGAHCELDRRNPGTDTD-KFFTIRGTPEQVEHAKRVF 375
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPD 61
G+GK++ F V N+ +IG GG ++ + +++GA + G D
Sbjct: 307 GEGKVE----------FSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTD 356
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
+ T+ G+ + VE + + R E + NR N
Sbjct: 357 KFFTIRGTPE-----QVEHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNK-- 409
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+++ +P CG +IGKGG IK I +GA+ ++ TE+ T+ G P+ +
Sbjct: 410 --VEVTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRNPGTETEKFFTIKGTPEQV 467
Query: 182 SQA 184
A
Sbjct: 468 EHA 470
>gi|198285613|gb|ACH85345.1| poly(rC) binding protein 2-like [Salmo salar]
Length = 114
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQ 337
GG D E+ + +D+ GC+IG+ GS++ EIRQ+SGAQI I E S + I
Sbjct: 28 GGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANPVEGSADRQVTIT 87
Query: 338 GCQEAVSLAQYLIN 351
G ++SLA+YLIN
Sbjct: 88 GSAASISLAEYLIN 101
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G +IG+ G KI +IR +SGA +++A+ + S +R VT+ G+ +IS A Y
Sbjct: 40 EMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP-VEGSADRQVTITGSAASISLAEY 98
Query: 187 QI 188
I
Sbjct: 99 LI 100
>gi|363755730|ref|XP_003648080.1| hypothetical protein Ecym_7443 [Eremothecium cymbalariae
DBVPG#7215]
gi|356892116|gb|AET41263.1| hypothetical protein Ecym_7443 [Eremothecium cymbalariae
DBVPG#7215]
Length = 342
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 30/197 (15%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSV 70
T +T + L ++ E + +IGPGG + +R +G KI I+ + +C DR++ V+GS+
Sbjct: 57 TYVTQKVLL----SLKEAARIIGPGGNTINNIRTANGVKIGISPKEKSCSDRLLEVTGSI 112
Query: 71 DNSSTSSVETGYPGHTLWVTSVD--------NVCTAYNFMCR--SLEDYHINRNRMENCS 120
S +S+ T T D +V NF+ SL++
Sbjct: 113 -TSVANSLADLVKVLTDDATEEDCGESEQEQHVFKHLNFILPPPSLDEIE---------D 162
Query: 121 PQPLQ----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
P+ L+ L+L++ + S+IG G KIK + + + V+ LP S +RI+ + G
Sbjct: 163 PEKLKQIGNLRLIVTNSQVSSIIGTQGTKIKKLIETHSVKLVVSKTFLPDSQDRILEIQG 222
Query: 177 NPDTISQAIYQICLVLI 193
P++I+ I I LI
Sbjct: 223 FPNSIANCIKDINKTLI 239
>gi|332319674|sp|B3LNH0.1|HEK2_YEAS1 RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|190408858|gb|EDV12123.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 381
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|403217012|emb|CCK71507.1| hypothetical protein KNAG_0H00920 [Kazachstania naganishii CBS
8797]
Length = 407
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 25/195 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDN 72
I+ R L ++++E + +IG G + ++R E+ KI I++ C DRI++ +G+V N
Sbjct: 66 ISHRVL----LSLSEAAKIIGTKGSKIAKIRTENNVKIGISEKIMGCSDRILSCAGTVFN 121
Query: 73 SSTS----------SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ 122
+ + E G+ L N A + L + E P+
Sbjct: 122 VANALGDVVDDLNEPDEFDEQGNALP-----NNDYAKKYPFHFLNHILPPPSSDEIKDPK 176
Query: 123 PLQ----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP 178
L L+L+I +H S+IGKGG IK + + G + + D LP S ER++ + G P
Sbjct: 177 ELANIGTLRLIIINSHLSSIIGKGGATIKGLIEKHGVKIVASKDFLPDSNERVLEIQGFP 236
Query: 179 DTISQAIYQICLVLI 193
I+ + +I +LI
Sbjct: 237 SAITNTLIEISDILI 251
>gi|332319675|sp|C7GND0.1|HEK2_YEAS2 RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|332319677|sp|C8Z3W4.1|HEK2_YEAS8 RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|256272733|gb|EEU07706.1| Hek2p [Saccharomyces cerevisiae JAY291]
gi|259144814|emb|CAY77753.1| Hek2p [Saccharomyces cerevisiae EC1118]
gi|323334746|gb|EGA76119.1| Hek2p [Saccharomyces cerevisiae AWRI796]
gi|323349877|gb|EGA84090.1| Hek2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356258|gb|EGA88062.1| Hek2p [Saccharomyces cerevisiae VL3]
gi|365767041|gb|EHN08529.1| Hek2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 381
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 90/174 (51%), Gaps = 21/174 (12%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I +++R ++ AKI I + C +R++T+ S ++T
Sbjct: 49 RKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNT---------- 98
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ---LKLVIPATHCGSLIGKG 142
V + D VC A + + R E I+ + S + L ++L++P+ G +IGKG
Sbjct: 99 --LVDAEDKVCPAQDALFRVHEKLSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKG 156
Query: 143 GCKIKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQICLVL 192
G I+ IR +GA+++V S + LP +S + ++ + G+ + +A+ Q+ L
Sbjct: 157 GHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKALLQVSSRL 210
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPDTIS 182
+L++ + G LIGKGG I +IR S AN+++ S + E +V + G+ D +
Sbjct: 368 RLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVR 427
Query: 183 QAIYQICLVLIECTLQVVKGA------VIPYEPKTMNAGPVILSGGQAY 225
A+ QI L + +GA VIPY P PV +S G Y
Sbjct: 428 HALLQITTRL-KANFFEREGALSGFPPVIPYHPL-----PVGVSEGPKY 470
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 134/328 (40%), Gaps = 48/328 (14%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVD--NSSTSSVETGYPGH 85
+ +IG GG + RL+ E+G KI + G P+R T++GS D N + V++
Sbjct: 105 VGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIV--- 161
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
V +++ N + + P ++++IP G +IGKGG
Sbjct: 162 NQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGET 221
Query: 146 IKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
IK +++ SGA + V D E+ + + G+P + A + ++ E +Q+
Sbjct: 222 IKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLY----- 276
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTP 265
N G S +++ G +G+ + G V G P
Sbjct: 277 -------NRGTRNFSSNNSFSQDG------NSESGEDR----RGNGVTG---------RP 310
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI-- 323
+ + G+R GK VE + + G +IGK G + EI Q +GA +
Sbjct: 311 SEYGSWEGNRPAGEGK------VEFSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDR 364
Query: 324 -HTGTESHKKMFHIQGCQEAVSLAQYLI 350
+ GT++ K F I+G E V A+ +
Sbjct: 365 RNPGTDTD-KFFTIRGTPEQVEHAKRVF 391
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 22/183 (12%)
Query: 5 GDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPD 61
G+GK++ F V N+ +IG GG ++ + +++GA + G D
Sbjct: 323 GEGKVE----------FSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTD 372
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
+ T+ G+ + VE + + R E + NR N
Sbjct: 373 KFFTIRGTPE-----QVEHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNK-- 425
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+++ +P CG +IGKGG IK I +GA+ ++ TE+ T+ G P+ +
Sbjct: 426 --VEVTYPVPTNKCGIIIGKGGETIKQINQQTGAHCELDRRNPGTETEKFFTIKGTPEQV 483
Query: 182 SQA 184
A
Sbjct: 484 EHA 486
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 162/392 (41%), Gaps = 65/392 (16%)
Query: 2 DGNGDGKI--------DE---DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGA 50
D +GD KI DE D LI R L V I +IG G ++ +R+++ A
Sbjct: 13 DQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGV----IGSVIGKSGKVINSIRQDTRA 68
Query: 51 KISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCR---S 105
KI + D DR++T+ V V+ + + D + + + S
Sbjct: 69 KIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS 128
Query: 106 LEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA----- 160
LE+ + E C ++++P++ ++IGK G IK +R + AN+++
Sbjct: 129 LENSDKKKKDKEEC-------QILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDST 181
Query: 161 --SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP-- 216
S M + V + G+ + + +A++ I ++ + T + IP + A P
Sbjct: 182 DPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPR----EEIPLDTTVPEAPPSI 237
Query: 217 VILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEG---IGST-SLTPAALAALS 272
+I S Y G Y V+ + P LA V ++G +GST + + L +S
Sbjct: 238 IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVS 297
Query: 273 GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH-------- 324
G G ++ + ++ D G VIG+ GS + +R+ SGA + +
Sbjct: 298 GY-----GASRSEELI-IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDE 351
Query: 325 -----TGTESHKKMFHIQGCQEAVSLAQYLIN 351
T TES + + EAV L Q IN
Sbjct: 352 CLITVTSTESVDDLKSM--AVEAVLLLQAKIN 381
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 151/367 (41%), Gaps = 74/367 (20%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR---IVTVS 67
E+ +I + C F ++I +IG GG ++ +R+ SGA + + D DR ++TV+
Sbjct: 305 EELIIRVLCPF------DKIGRVIGRGGSSIKSVREASGAHVEVDDTKA-DRDECLITVT 357
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
ST SV+ + ++E + + ++ + + ++
Sbjct: 358 ------STESVD--------------------DLKSMAVEAVLLLQAKINDEDDDTVAIR 391
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQA 184
L++P+ G +IGK G I +IR + A+V+++ P + + ++ V G ++ A
Sbjct: 392 LLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSERPKCADANDELIEVVGEVGSVRDA 451
Query: 185 IYQICLVLIECTLQVVKGAVIPYEPKTMNAG-PVILSGGQAYTLHG--EYAVPVQEVAGK 241
+ QI L L + L+ +AG + SGG ++ A PV ++
Sbjct: 452 LVQIVLRLRDDALKDRDTG------HNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYD 505
Query: 242 KQPH-------------PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
++ G +G GS S + L GG T F
Sbjct: 506 QRAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLY---------GGLPTPSTF- 555
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQ 347
++V+ + G V+GK G+ + IR+ISGA I I S ++ I G E A+
Sbjct: 556 --DMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAE 613
Query: 348 YLINMCI 354
LI I
Sbjct: 614 NLIQAFI 620
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 90/174 (51%), Gaps = 21/174 (12%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I +++R ++ AKI I + C +R++T+ S ++T
Sbjct: 49 RKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNT---------- 98
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ---LKLVIPATHCGSLIGKG 142
V + D VC A + + R E I+ + S + L ++L++P+ G +IGKG
Sbjct: 99 --LVDAEDKVCPAQDALFRVHEKLSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKG 156
Query: 143 GCKIKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQICLVL 192
G I+ IR +GA+++V S + LP +S + ++ + G+ + +A+ Q+ L
Sbjct: 157 GHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKALLQVSSRL 210
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 16/109 (14%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPDTIS 182
+L++ + G LIGKGG I +IR S AN+++ S + E +V + G+ D +
Sbjct: 368 RLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVR 427
Query: 183 QAIYQICLVLIECTLQVVKGA------VIPYEPKTMNAGPVILSGGQAY 225
A+ QI L + +GA VIPY P PV +S G Y
Sbjct: 428 HALLQITTRL-KANFFEREGALSGFPPVIPYHPL-----PVGVSEGPKY 470
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 29/319 (9%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDN 72
++ R L H+S I +IG G I++ L++++GAK+ I D PDR++TV G +
Sbjct: 36 VSFRLLCHAS----RIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQ 91
Query: 73 SST--SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
S+ S +E+ V + R E ++ + + +++
Sbjct: 92 SAVVFSRIESAV-----------EVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLA 140
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP---MSTERIVTVHGNPDTISQAIYQ 187
+ G++IGKGG ++ IR G ++V D LP S E ++ + G+ + + +
Sbjct: 141 EVSSVGAVIGKGGKVVEKIRKDCGCRIKVLVDKLPDCAASNEEMIEIEGDVSAVKKGLVA 200
Query: 188 ICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPL 247
+ L +C Q V + V LS + +H ++ + +A P
Sbjct: 201 VSRCLQDC--QPVDKTRVTNSKPAEAVSRVSLSDVRV-EIHPRHSAVLPTIAQNSSVLPT 257
Query: 248 AGLAVLGIEGIGSTSLTPAALA---ALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIG 304
LG+ I +S+ A+ +L RV + + V + TD I G VIG
Sbjct: 258 IPQHSLGLPTIPKSSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDRIGG-VIG 316
Query: 305 KAGSRLLEIRQISGAQINI 323
K G+ + ++ +GA I++
Sbjct: 317 KGGNIVRALQNETGAAISV 335
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TDGACPDRI 63
D + DT I + +F + I +IG GG IVR L+ E+GA IS+ T C +R+
Sbjct: 287 DRVVTPDTNIPQQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERL 346
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
+TV+ S + S + + + ++ S + ++ P
Sbjct: 347 ITVTASENPESR------------YSAAQKTIVLVFSRAVESGIEKGLDPGSSRGS---P 391
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ--VASDMLPM---STERIVTVHGNP 178
+ +LV+ + G L+GKGG I ++R + +++ V P T+ +V + G+
Sbjct: 392 VTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGDF 451
Query: 179 DTISQAIYQI 188
+ AIY +
Sbjct: 452 VNVKDAIYHV 461
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 256 EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
GI S +L A G + SGGK EIV+ ++ G V G+ GS L +RQ
Sbjct: 620 RGISDVSRRLPSLKA--GLELGSGGKSAFVTNTTVEIVVPENAFGSVYGENGSNLARLRQ 677
Query: 316 ISGAQINIHT---GTESHKKMFHIQGCQEAVSLAQYLINMCI 354
ISGA++ +H GT ++ I G + AQ L+ I
Sbjct: 678 ISGAKVIVHEPRLGTSD--RIVVISGTPDETQAAQSLLQAFI 717
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 162/373 (43%), Gaps = 68/373 (18%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G +++++ +E+ A+I + DGA DRIV +SG + +
Sbjct: 78 CVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPL 137
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR----MENCSPQPLQLKLVIPA 132
S ++D V + + E + + CS ++L++ +
Sbjct: 138 S------------PAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCS-----IRLLVAS 180
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVAS-DMLPM---STERIVTVHGNPDTISQAIYQI 188
T +LIGK G IK I++ +GA+V+V S D +P + ERIV + G + +A+ +
Sbjct: 181 TQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAV 240
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYT------LHG--------EYAVP 234
L + +V +V+P +T NA I Q+ T LHG +Y++P
Sbjct: 241 VGHLRKF---LVDHSVLPLFERTYNA--TISQDRQSDTWADKSLLHGTSQTGMGSDYSLP 295
Query: 235 VQEVA---GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
+ + ++ +GL + G E LSG ++S G + T+
Sbjct: 296 AKRESLYLDRETQMEHSGLPMYGQE------------HGLSG--IRSSGLGRAGAPIVTQ 341
Query: 292 IVLTDDI----AGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQGCQEAVSLA 346
I T I A +IG G+ + IR+ SGA + + ++ I+G V A
Sbjct: 342 IAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQTA 401
Query: 347 QYLINMCIELQKN 359
Q LI I K
Sbjct: 402 QQLIQEFISNHKE 414
>gi|302768295|ref|XP_002967567.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
gi|300164305|gb|EFJ30914.1| hypothetical protein SELMODRAFT_88821 [Selaginella moellendorffii]
Length = 272
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 87/169 (51%), Gaps = 34/169 (20%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYP 83
E +IG GG + L+ +SGA+I ++ DR+V +SG++++
Sbjct: 8 EAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSGAIND----------- 56
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
V TA N + ++ + ++ ++ +P QL+LV+P + CG++IGKGG
Sbjct: 57 -----------VLTALNLILSKIQKETEDDSQTDS---KPNQLRLVVPNSVCGAIIGKGG 102
Query: 144 CKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
IK + S A++++ S +L ++R+VT+ G +I Q + + L+L
Sbjct: 103 GTIKSFIEDSEASIKL-SGILQGISDRLVTITG---SIEQQLKAVELIL 147
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 17/140 (12%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVE---------T 80
+IG GG ++ ++S A I ++ DR+VT++GS++ +VE +
Sbjct: 96 AIIGKGGGTIKSFIEDSEASIKLSGILQGISDRLVTITGSIEQQ-LKAVELILTKLLGDS 154
Query: 81 GYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
Y + S +C F L Y + +E+C P + L +P H G+++G
Sbjct: 155 SYLDYAAAPLSYTVIC----FKLFRLAPYPVLLPVLESC-PVTTSITLAVPDEHIGAIVG 209
Query: 141 KGGCKIKDIRDLSGANVQVA 160
+GG + +I+ SG ++++
Sbjct: 210 RGGKTLGEIQQASGVTIKIS 229
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
+ ++ GS+IGKGG I D++ SGA +Q+ + D P +T+R+V + G
Sbjct: 1 RFLVSNAEAGSVIGKGGATISDLQSQSGARIQLSRSQDFFPGTTDRVVVLSG 52
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 204 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 259
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 260 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 319
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 320 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 379
Query: 182 SQA 184
+A
Sbjct: 380 FKA 382
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 191
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 192 ---CRMILEI 198
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|323338797|gb|EGA80012.1| Hek2p [Saccharomyces cerevisiae Vin13]
Length = 409
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|323306049|gb|EGA59783.1| Hek2p [Saccharomyces cerevisiae FostersB]
gi|323310169|gb|EGA63361.1| Hek2p [Saccharomyces cerevisiae FostersO]
Length = 381
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANXVKIGISEKVXGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLXKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 162/392 (41%), Gaps = 65/392 (16%)
Query: 2 DGNGDGKI--------DE---DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGA 50
D +GD KI DE D LI R L V I +IG G ++ +R+++ A
Sbjct: 13 DQDGDNKIQKRRVNERDEKGSDELIVYRILCPDGV----IGSVIGKSGKVINSIRQDTRA 68
Query: 51 KISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCR---S 105
KI + D DR++T+ V V+ + + D + + + S
Sbjct: 69 KIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKVHAAIVNAVAS 128
Query: 106 LEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA----- 160
LE+ + E C ++++P++ ++IGK G IK +R + AN+++
Sbjct: 129 LENSDKKKKDKEEC-------QILVPSSQSANVIGKAGATIKRLRSKTRANIKITAKDST 181
Query: 161 --SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGP-- 216
S M + V + G+ + + +A++ I ++ + T + IP + A P
Sbjct: 182 DPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPR----EEIPLDTTVPEAPPSI 237
Query: 217 VILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEG---IGST-SLTPAALAALS 272
+I S Y G Y V+ + P LA V ++G +GST + + L +S
Sbjct: 238 IIPSDVPIYPAGGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVS 297
Query: 273 GSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH-------- 324
G G ++ + ++ D G VIG+ GS + +R+ SGA + +
Sbjct: 298 GY-----GASRSEELI-IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDE 351
Query: 325 -----TGTESHKKMFHIQGCQEAVSLAQYLIN 351
T TES + + EAV L Q IN
Sbjct: 352 CLITVTSTESVDDLKSM--AVEAVLLLQAKIN 381
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
P P +VIPA G ++GKGG I +IR +SGA +++ SD +R+ + G P+
Sbjct: 564 PTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEI-SDSKSSRGDRVALISGTPE 621
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 42/366 (11%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G +++++ +E+ ++I + D PDRIV VSG + +
Sbjct: 52 CVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAAL 111
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR---MENCSPQPLQLKLVIPAT 133
S ++D V + + E N+ + CS ++L++ +T
Sbjct: 112 S------------PAMDAVVRIFKRVSGLSETDAENKESAAGLAFCS-----IRLLVAST 154
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMST--ERIVTVHGNPDTISQAIYQIC 189
+LIGK G IK I++ + A+V+V S ++ +T ERIV + G + +A+ +
Sbjct: 155 QAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVV 214
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAG 249
L + +V +V+P KT NA + ++ + P+
Sbjct: 215 GHLRKF---LVDHSVLPLFEKTYNASTSQDRQAETWSDKSLLHTTSRTSIFADIPYSTKR 271
Query: 250 LAVLGIEGIGSTSLTPAAL-------AALSGSRVKSGGKDTGDDFVETEIVLTDDI---- 298
+VL S P++ ++LSG R + G+ G V T ++ T I
Sbjct: 272 DSVLADRESQLDSFLPSSTMSLYGQDSSLSGVRSSALGR-VGAPIV-TTVIQTMQIPLSY 329
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
A +IG G+ + IR+ SGA + + + + I+G V AQ LI I K
Sbjct: 330 AEDIIGIQGTNIEYIRRTSGAILTVQESRVPDEIVVEIKGTSSEVQTAQQLIQDVISSHK 389
Query: 359 NNTTNT 364
T++
Sbjct: 390 EPITSS 395
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 157/378 (41%), Gaps = 66/378 (17%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 71 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 130
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N M+ S +L+
Sbjct: 131 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFH---NDMDGNS---TIQELL 168
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP ++ + + G+P + QA +
Sbjct: 169 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV 228
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAG--------PVILSGGQAYTLHGEYAVPVQEVAG 240
++ E +G + T AG P + G +GE +Q AG
Sbjct: 229 LEIIREKDQADFRGVRSDF---TSRAGGGSIEVSVPRFVV-GIVIGRNGEMIKKIQNDAG 284
Query: 241 KK-QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSG-GKDTG 284
+ Q P G++ V+G I LT L G V G G+
Sbjct: 285 VRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELILTAQEREILGGLTVTRGRGRGRS 344
Query: 285 DDFVET-----EIVLT--DDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKM 333
D V T EI T D G VIGK G + I Q SGA + + T+ + ++
Sbjct: 345 DWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRI 404
Query: 334 FHIQGCQEAVSLAQYLIN 351
F I+G + + +A++LI+
Sbjct: 405 FTIRGAPQQMEVARHLID 422
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 12/193 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 204 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 259
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ + + VE + + V T + + + P
Sbjct: 260 RTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYP 319
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 320 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 379
Query: 182 SQAIYQICLVLIE 194
+A +I L E
Sbjct: 380 FKAQGRIFGKLKE 392
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 133 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 191
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 192 ---CRMILEI 198
>gi|198430105|ref|XP_002128022.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K,
like [Ciona intestinalis]
Length = 323
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 13 TLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDN 72
T I MRCL V +IG GG ++ +R A+I+I D +R++ +S S+++
Sbjct: 56 THIQMRCL----VPAKCAGGIIGKGGTNIKDMRDTFKAQINIPDSDSRERVLRISASIES 111
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPA 132
+ TL V + + F +D + +KL++
Sbjct: 112 CGEILL------RTLPVINEAALNGPGRFGRDPKDD---------------MSIKLLVHQ 150
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ G +IG G KIK++R+ +GA ++V D P ST+R+ V G+ + IS C+VL
Sbjct: 151 SQAGGIIGVKGFKIKELREKTGATIKVQQDCCPNSTDRVCMVAGSAEIISS-----CVVL 205
Query: 193 IECTLQVV--KGAVIPYEP 209
I L+ + KG + + P
Sbjct: 206 ILELLETIPPKGPIQNFNP 224
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 47/171 (27%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPG 84
+ LIG GG +R L+ ESG ++ ++ +RI V G + +
Sbjct: 13 VGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIAS------------ 60
Query: 85 HTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPL----------QLKLVIPATH 134
V V +V LE R +++N +P + ++KLV+P T
Sbjct: 61 ----VLKVSDVI---------LEKI---REKVDNNTPSDIFDHKGMERKNEMKLVVPNTS 104
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQV----ASDMLPMSTERIVTVHGNPDTI 181
G +IGK G +IK+IR+ +GAN+QV S +S ERI+T+ D +
Sbjct: 105 AGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEV 155
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVHG 176
+Q+K++IP+ G+LIGKGG +++++ SG +Q++ ++ P + ERI V G
Sbjct: 2 VQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 56
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 157/378 (41%), Gaps = 66/378 (17%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 71 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 130
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N M+ S +L+
Sbjct: 131 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFH---NDMDGNS---TIQELL 168
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP ++ + + G+P + QA +
Sbjct: 169 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV 228
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAG--------PVILSGGQAYTLHGEYAVPVQEVAG 240
++ E +G + T AG P + G +GE +Q AG
Sbjct: 229 LEIIREKDQADFRGVRSDF---TSRAGGGSIEVSVPRFVV-GIVIGRNGEMIKKIQNDAG 284
Query: 241 KK-QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSG-GKDTG 284
+ Q P G++ V+G I LT L G V G G+
Sbjct: 285 VRIQFKPDDGISPERAAQVMGPPDRCQHAARIINELILTAQEREILGGLTVTRGRGRGRS 344
Query: 285 DDFVET-----EIVLT--DDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKM 333
D V T EI T D G VIGK G + I Q SGA + + T+ + ++
Sbjct: 345 DWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRI 404
Query: 334 FHIQGCQEAVSLAQYLIN 351
F I+G + + +A++LI+
Sbjct: 405 FTIRGAPQQMEVARHLID 422
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 265 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 320
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ + + +E + + V T + + + + P
Sbjct: 321 RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFSPFPHHHSYP 380
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 381 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 440
Query: 182 SQA 184
+A
Sbjct: 441 FKA 443
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 8/90 (8%)
Query: 110 HINRNRMENCSPQPLQ----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP 165
H +R + S Q Q L++++P G++IGK G IK+I + + V +
Sbjct: 174 HSSREQGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 233
Query: 166 MSTERIVTVHGNPDTISQAIYQICLVLIEC 195
+ E+ VT+H P+ S+A C +++E
Sbjct: 234 GAAEKPVTIHATPEGTSEA----CRMILEI 259
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 157/378 (41%), Gaps = 66/378 (17%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 71 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 130
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N M+ S +L+
Sbjct: 131 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFH---NDMDGNS---TIQELL 168
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP ++ + + G+P + QA +
Sbjct: 169 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV 228
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAG--------PVILSGGQAYTLHGEYAVPVQEVAG 240
++ E +G + T AG P + G +GE +Q AG
Sbjct: 229 LEIIREKDQADFRGVRSDF---TSRAGGGSIEVSVPRFVV-GIVIGRNGEMIKKIQNDAG 284
Query: 241 KK-QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSG-GKDTG 284
+ Q P G++ V+G I LT L G V G G+
Sbjct: 285 VRIQFKPDDGISPERAAQVMGPPDRCQHAAPIINELILTAQEREILGGLTVTRGRGRGRS 344
Query: 285 DDFVET-----EIVLT--DDIAGCVIGKAGSRLLEIRQISGAQINIH----TGTESHKKM 333
D V T EI T D G VIGK G + I Q SGA + + T+ + ++
Sbjct: 345 DWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRI 404
Query: 334 FHIQGCQEAVSLAQYLIN 351
F I+G + + +A++LI+
Sbjct: 405 FTIRGAPQQMEVARHLID 422
>gi|444322327|ref|XP_004181812.1| hypothetical protein TBLA_0G03570 [Tetrapisispora blattae CBS 6284]
gi|387514857|emb|CCH62293.1| hypothetical protein TBLA_0G03570 [Tetrapisispora blattae CBS 6284]
Length = 421
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS-----SVETG 81
E + +IG G ++++R ++ KI I+D C DRI+ +G +N + + V T
Sbjct: 58 ESARIIGTKGVTIQKIRTDNNVKIGISDKEPGCSDRILLCNGPTENVANAIGDIIDVLTN 117
Query: 82 YPGHTLWV-----------TSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
+ SV +V NF+ I N +N L+L++
Sbjct: 118 EKFDNQLIDDDISNVSNGPNSVKHVFHYLNFILPPPTVEEIKENPEKNLK-NIGNLRLLV 176
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
+ +IGK G +IK + D G + + D LP S ERI+ + G P +IS I +I
Sbjct: 177 TNSQLSGIIGKNGNRIKSLIDNHGVKIVASKDFLPDSDERILEIQGFPGSISNVIVEINS 236
Query: 191 VLI 193
+L+
Sbjct: 237 ILV 239
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 156/380 (41%), Gaps = 70/380 (18%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I G P+R ++G+
Sbjct: 90 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGT 149
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H + + N + Q +++
Sbjct: 150 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFHNDVD--GNSTIQ----EIL 187
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G + + D LP ++ + + G P + QA +
Sbjct: 188 IPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGEPFKVQQAREMV 247
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK- 242
++ E +G + + M G + +S G +GE +Q AG +
Sbjct: 248 LEIIREKDQADFRGVRSDFSSR-MGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 306
Query: 243 QPHPLAGLA------VLGI---------------------EGIGSTSLTPAALAALSGSR 275
Q P G++ V+G+ +G GS ++
Sbjct: 307 QFKPDDGISPERVAQVMGLPDRCQHAAHIINELILTAQERDGFGSLAVARGRGRGRGDWS 366
Query: 276 VKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHK 331
V + G E + D G VIGK G + I Q SGA + + T+
Sbjct: 367 VGTPG-----GMQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSV 421
Query: 332 KMFHIQGCQEAVSLAQYLIN 351
++F I+G + + LA++LI+
Sbjct: 422 RIFTIRGVPQQIELARHLID 441
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 158/378 (41%), Gaps = 66/378 (17%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 71 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 130
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N ++ S +++
Sbjct: 131 PE-----SIEQA---KRLLGQIVDR--------CRNGPSFH---NDVDGNS---TIQEIL 168
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP T++ + + G+P + QA +
Sbjct: 169 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITGDPFKVQQAREMV 228
Query: 189 CLVLIE---CTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAG 240
++ E + V+G M G + +S G +GE +Q AG
Sbjct: 229 LEIIREKDQADFRSVRGDFG----SRMGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAG 284
Query: 241 KK-QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSG-GKDTG 284
+ Q P G++ V+G I LT V G G+ G
Sbjct: 285 VRIQFKPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGSLAVPRGRGRSRG 344
Query: 285 DDFVET-----EIVLT--DDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKM 333
D V T EI T D G VIGK G + I Q SGA + + T+ + ++
Sbjct: 345 DWSVGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRI 404
Query: 334 FHIQGCQEAVSLAQYLIN 351
F I+G + + +A++LI+
Sbjct: 405 FTIRGIPQQIEVARHLID 422
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ + + VE + + V T + + + P
Sbjct: 323 RTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|157108094|ref|XP_001650073.1| heterogeneous nuclear ribonucleoprotein k [Aedes aegypti]
gi|108868581|gb|EAT32806.1| AAEL014959-PA [Aedes aegypti]
Length = 430
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 89/178 (50%), Gaps = 35/178 (19%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG G +++LR E A++++ D P+R++T+ G ++ +T+
Sbjct: 51 AIIGKAGHNIQKLRTEYQAQVNVGDCTGPERVLTIGGDMET----------------ITN 94
Query: 92 VDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRD 151
V V + ++ E+ + +L++++ + G +IG+GG KIK+++D
Sbjct: 95 V--VKDVMKHLDKAGENEY--------------ELRILVHQSLAGCVIGRGGTKIKELKD 138
Query: 152 LSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
G +++ S++ P ST+RI V G D A+ I + LI+ T +KG V Y+P
Sbjct: 139 QIGCRLKIFSNIAPQSTDRIAQVIGTEDQCLTALNDI-IGLIQGT--PIKGPVHNYDP 193
>gi|348578485|ref|XP_003475013.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Cavia
porcellus]
Length = 338
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 139/341 (40%), Gaps = 74/341 (21%)
Query: 78 VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR--NRMENCSPQPLQLKLVIPATHC 135
+ET P T N T F R ED + R N + + ++L++++ + +
Sbjct: 1 METEQPEETF-----PNTETNGEFGKRPAEDMEEEQAFKRSRN-TDEMVELRILLQSKNA 54
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL--- 192
G++IGKGG IK +R A+V V P ERI+++ + +TI + + +I L
Sbjct: 55 GAVIGKGGKNIKALRTDYNASVSVPDSSGP---ERILSISADIETIGEILKKIIPTLEEG 111
Query: 193 ------------------IEC-TLQVVKGAVIPYEPK-----TMNAGPVILSGGQAYTL- 227
+EC Q KG+ E + ++ G + + G + L
Sbjct: 112 LQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELR 171
Query: 228 -------------HGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGS 274
+ +Y +A ++ P G G+ G + +A+ S S
Sbjct: 172 EIHIGVCECMNCNYSKYCTFRDLMAYDRRGRP--GDRYDGMVGFSADETWDSAIDTWSPS 229
Query: 275 RVK---------------SGGK----DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQ 315
+ +GG+ D G + T++ + D+AG +IGK G R+ +IR
Sbjct: 230 EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRH 289
Query: 316 ISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
SGA I I E S ++ I G Q+ + AQYL+ ++
Sbjct: 290 ESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVK 330
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
+L+L+I + G +IG G KIK++R++
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELREI 173
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 199 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 254
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ + + VE + + V T + + + P
Sbjct: 255 RTITVKGTVEACANAEVEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYP 314
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 315 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 374
Query: 182 SQA 184
+A
Sbjct: 375 FKA 377
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 128 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 186
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 187 ---CRMILEI 193
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 165/416 (39%), Gaps = 74/416 (17%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
+F V V+++ +IG G ++R+ +ES A+I I DG P+R V +S +
Sbjct: 114 SVFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQI 173
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
S ++D + + + D + + + P +L++PA+ G
Sbjct: 174 S------------PAMDGLLRIHKRIADG-SDGEFGQTQRGTGTMGPT--RLLVPASQAG 218
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQIC----L 190
SLIGK G IK I+D S A V++ ++ P ++ +R+V + G P ++ +A+ I
Sbjct: 219 SLIGKQGATIKSIQDSSKAVVRIVENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRK 278
Query: 191 VLIECTL-----QVVKGAVIPYEPKTMNA-------------------------GPVILS 220
L++ ++ Q +K +P E + M A P +
Sbjct: 279 FLVDHSVLPLFEQQMKMHSMPRE-QPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMP 337
Query: 221 GGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG 280
+ VP E KQPH G++ G E S + + S+V
Sbjct: 338 PRPQDNYYPPPDVPPME----KQPH--YGISAYGREAPSGVSASGNQPPSHVASQVTHN- 390
Query: 281 KDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQGC 339
+I L+ A VIG AG+ + IR+ SGA + I + +M I G
Sbjct: 391 ---------MQIPLS--YADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIGS 439
Query: 340 QEAVSLAQYLI-NMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEKPT 394
V AQ LI N E + NP +D + ++ A +S PT
Sbjct: 440 ASQVQTAQQLIQNFMAEAAPQGRPPPASNPPAPPVDPSYGSYPPAPYGASYGSPPT 495
>gi|358255903|dbj|GAA57520.1| heterogeneous nuclear ribonucleoprotein K, partial [Clonorchis
sinensis]
Length = 1085
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 33/161 (20%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG GG ++R+R+E K+ I D P+R++ + G + +
Sbjct: 5 IIGKGGENIQRIREEYSVKVMIPDSNGPERVLVLDGDLGS-------------------- 44
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
LE + N RM+N + + L+L++ + G +IG+GG KIK++R+
Sbjct: 45 ------------VLEIFVENLERMQNNRDEGVDLRLLVHQSQAGCIIGRGGYKIKELREQ 92
Query: 153 SGANVQVASDML-PMSTERIVTVHGNPDTISQAIYQICLVL 192
SG ML P ST+R++ + G+ D + + I +L
Sbjct: 93 SGLQTLKVYQMLCPGSTDRVIQLVGDLDKVVDCLQAIAELL 133
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI--SQAIYQICLVLI 193
G+++G+ G +I +R S A++++ S P +RI+T+ G P+ I +Q + Q+ +L+
Sbjct: 291 GAIMGRAGVRINQVRQESNADIKI-SRQEPGVEDRIITITGTPEQIQNAQFLLQMWKILV 349
Query: 194 ECT 196
C+
Sbjct: 350 SCS 352
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI---HTGTESHKKMFHIQGCQEAVSLA 346
T++ +++ + G ++G+AG R+ ++RQ S A I I G E ++ I G E + A
Sbjct: 281 TQVSVSNKMIGAIMGRAGVRINQVRQESNADIKISRQEPGVED--RIITITGTPEQIQNA 338
Query: 347 QYLINMCIELQKNNTTNTSDNPEPADLDAA 376
Q+L+ M L + ++S NP P DL+ A
Sbjct: 339 QFLLQMWKILV---SCSSSTNPIP-DLERA 364
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 40/207 (19%)
Query: 10 DEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVS 67
+EDT+ C + +I +IG GG I ++LR ES + I I++ +RIVT+
Sbjct: 47 NEDTVYRYLC------PLRKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIY 100
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN--FMCRS--------------LEDYHI 111
+ + S+ L+ S + VC A + FM E+
Sbjct: 101 SNSEESN------------LFGDSGEFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDE 148
Query: 112 NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM----LPMS 167
Q + +++++PA G +IGKGG I+ IR +GA +++ D L +S
Sbjct: 149 EEEEFGESKEQVVTVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALS 208
Query: 168 TERIVTVHGNPDTISQAIYQICLVLIE 194
++ ++ + G P + +A+YQ+ L E
Sbjct: 209 SDELLLIIGEPAVVRKALYQVATRLHE 235
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTIS 182
+L++P + G L+GKGG I ++R+++ A++++ A D LP + +V + G+ D S
Sbjct: 385 RLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNLPKVASEDDEMVQITGSHDVAS 444
Query: 183 QAIYQICLVLIECTLQVVKGAV------IPYEPKTMN 213
A+ + L L + L GA+ +PY P +M+
Sbjct: 445 NALLHVVLRL-KANLFGRDGALTAFPPALPYIPVSMD 480
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 148/354 (41%), Gaps = 56/354 (15%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSS 77
R L SS + N +IG G +++LR ++ A I +T D
Sbjct: 145 RILVPSSQSAN----IIGKAGTTIKKLRSKTRATIKVTPKDASD---------------- 184
Query: 78 VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGS 137
P H+ + + + + + ++E + + ++ + + ++L++P G
Sbjct: 185 -----PTHSCAMDFDNFIMSPDDLKSMAVEAILLLQGKINDEDDDTVSIRLLVPCKVIGC 239
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIE 194
+IGK G I +IR + A+++++ P S++ +V V G ++ A+ QI L L +
Sbjct: 240 IIGKSGSIINEIRRRTKADIRISKGQKPKCADSSDELVEVLGEVGSVRDALVQIVLRLRD 299
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAV--PVQEVAGKKQPHP------ 246
L+ G+ P ++ A P + SGG ++ + PV +A ++P
Sbjct: 300 DALKEKDGSHNP----SVGADP-LYSGGSGISVPSLLSSVPPVTPLAYDQRPETGSGLGL 354
Query: 247 -----LAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGC 301
L G L + G S++ + + L G E+++ + G
Sbjct: 355 LSSSNLYGYGSLTMGDNGYDSMSSYSSSKLYGGLPPPS---------TLEMLVPANAVGK 405
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTESH-KKMFHIQGCQEAVSLAQYLINMCI 354
V+GK G+ + IR+ISGA I I + ++ HI G E A+ LI I
Sbjct: 406 VLGKGGANIANIRKISGAMIEISDAKSARGDRIAHISGTPEQKRAAENLIQAFI 459
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 76/159 (47%), Gaps = 12/159 (7%)
Query: 4 NGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP--- 60
+ D + + D L+ R L V I +IG G ++ +R+E+ AK+ + D P
Sbjct: 28 DKDERGNNDELVAYRILCPDEV----IGSVIGKNGKVINSIRQETRAKVKVVD-PFPGPN 82
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS 120
DR++T+ V ++ + H + + D + ++ + ++ + +M++
Sbjct: 83 DRVITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKE 142
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV 159
+ ++++P++ ++IGK G IK +R + A ++V
Sbjct: 143 ----ECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKV 177
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 115/277 (41%), Gaps = 42/277 (15%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVT----VHGNPDTIS 182
+++ P GS+IGK G I IR + A V+V D P +R++T V D
Sbjct: 42 RILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV-DPFPGPNDRVITIYCYVKKKEDVEL 100
Query: 183 QAIY---------QICLVLIECTLQVVKGAVIPYEPKTMNAGP--VILSGGQAYTLHGEY 231
+ Q L+ + + +V+ + K + +++ Q+ + G+
Sbjct: 101 DDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEECRILVPSSQSANIIGKA 160
Query: 232 AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTS----------LTPAALAALSGSRV---KS 278
++++ K + A + V + T ++P L +++ + +
Sbjct: 161 GTTIKKLRSKTR----ATIKVTPKDASDPTHSCAMDFDNFIMSPDDLKSMAVEAILLLQG 216
Query: 279 GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-----TESHKKM 333
D DD V +++ + GC+IGK+GS + EIR+ + A I I G +S ++
Sbjct: 217 KINDEDDDTVSIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRISKGQKPKCADSSDEL 276
Query: 334 FHIQGCQEAVSLAQYLINMCIELQKN--NTTNTSDNP 368
+ G E S+ L+ + + L+ + + S NP
Sbjct: 277 VEVLG--EVGSVRDALVQIVLRLRDDALKEKDGSHNP 311
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 152/374 (40%), Gaps = 58/374 (15%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 43 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 102
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N ++ S +++
Sbjct: 103 PE-----SIELA---KRLLGQIVDR--------CRNGPGFH---NDVDGSS---TVQEVL 140
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP ++ + + G+P + QA +
Sbjct: 141 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRMTGDPFKVQQAREMV 200
Query: 189 CLVLIECTLQVVKGAVIPYEPKT----MNAGPVILSGGQAYTLHGEYAVPVQEVAGKK-Q 243
++ E +GA + P+T + + G +GE +Q AG + Q
Sbjct: 201 LEIIREKDQADFRGARGDFAPRTGGGSLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQ 260
Query: 244 PHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSGGKDTGDDFV- 288
P G++ V+G I LT G V G D+
Sbjct: 261 FKPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSL 320
Query: 289 -------ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMFHIQ 337
E + D G VIGK G + I Q SGA + + T+ ++F I+
Sbjct: 321 GTPGGIQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRIFTIR 380
Query: 338 GCQEAVSLAQYLIN 351
G + + +A++LI+
Sbjct: 381 GIPQQIEVARHLID 394
>gi|365762136|gb|EHN03743.1| Hek2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 380
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTITRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ + ++F+ L +D + ++EN ++L++
Sbjct: 110 VLNKRSSENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLENIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGHT 86
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPG-- 212
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNR-----MENCSPQPL--------QLKLVIPAT 133
S+ NV + + S D N R ++ + +PL +++L IP
Sbjct: 213 ----SITNVLIEISEIILSDVDVRFNMERSYFPHLKKSAVEPLSPSASSNTRIELKIPEL 268
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQV 159
+ G++IG+G +IK+++ + N+ V
Sbjct: 269 YVGAIIGRGMNRIKNLKTFTKTNIIV 294
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 60/375 (16%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 73 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGT 132
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H + + +++
Sbjct: 133 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFHNDVDGNNTIQ------EIL 170
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G + + D LP ++ + + G+P + QA +
Sbjct: 171 IPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQAREMV 230
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK- 242
++ E +G + + M G + +S G +GE +Q AG +
Sbjct: 231 LEIIREKDQADFRGVRSDFSSR-MGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 289
Query: 243 QPHPLAGLA------VLG-----------IEGIGSTSLTPAALAALSGSRVKSGGKDTGD 285
Q P G++ V+G I + T+ +LS R + G+
Sbjct: 290 QFKPDDGISPERVAQVMGLPERCQHAAHVISDLILTAQERDGFGSLSVPRGRGRGRSDWS 349
Query: 286 -----DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMFHI 336
E + D G VIGK G + I Q SGA + + T+ ++F I
Sbjct: 350 IGAPGGLQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFTI 409
Query: 337 QGCQEAVSLAQYLIN 351
+G + + LA++LI+
Sbjct: 410 RGVPQQIELARHLID 424
>gi|198427864|ref|XP_002125995.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K
[Ciona intestinalis]
Length = 402
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 92/184 (50%), Gaps = 35/184 (19%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVT-VSGSVDNSSTSSVETGYPGHTLWVT 90
+IG GG +R LR+E A + + D +RIV+ V+ ++++++
Sbjct: 61 AIIGKGGANIRDLRQEFNANVQVPDSHGFERIVSAVAKTIEDAA---------------- 104
Query: 91 SVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ-LKLVIPATHCGSLIGKGGCKIKDI 149
N+C + +L + RM + P+ + L++++ + G++IG G +IK++
Sbjct: 105 ---NICGK---VVEALNE------RMHH--PEKVGCLRMLVHKSQAGTIIGLKGSRIKEL 150
Query: 150 RDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
R+++GAN++V + P ST+R+ V G D + + + +I L + KG + Y+P
Sbjct: 151 REMTGANIKVNQECCPESTDRVCQVRGTADVVVKCVARILEHLQQAP---PKGPIKNYDP 207
Query: 210 KTMN 213
+
Sbjct: 208 NCFD 211
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV 174
++L+++IP+ G++IGKGG I+D+R ANVQV ERIV+
Sbjct: 48 IELRVLIPSHTAGAIIGKGGANIRDLRQEFNANVQVPD---SHGFERIVSA 95
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 278 SGGKDTGD-DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI-HTGTESHKKMFH 335
SG TG+ D T++ + A VIGK G R+ +IR+ SGA I I G +++
Sbjct: 318 SGDGQTGNGDQKTTQVTIPTSCAASVIGKTGQRIRQIREDSGAVIVIDEAGPGEEERVIS 377
Query: 336 IQGCQEAVSLAQYLINMCIELQKN 359
I G +E AQ+L+ E K+
Sbjct: 378 ITGNEEQTQNAQFLLQKNAEEPKD 401
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ + + +E + + V T + + + P
Sbjct: 323 RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPPHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|401841896|gb|EJT44211.1| HEK2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 380
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 86/181 (47%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTITRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ + ++F+ L +D + ++EN ++L++
Sbjct: 110 VLNKRSSENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLENIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGHT 86
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPG-- 212
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNR-----MENCSPQPL--------QLKLVIPAT 133
S+ NV + + S D N R ++ + +PL +++L IP
Sbjct: 213 ----SITNVLIEISEIILSDVDVRFNMERSYFPHLKKSAGEPLSPSASSNTRIELKIPEL 268
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQV 159
+ G++IG+G +IK+++ + N+ V
Sbjct: 269 YVGAIIGRGMNRIKNLKTFTKTNIIV 294
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 154/375 (41%), Gaps = 60/375 (16%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 122 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGT 181
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H + + +++
Sbjct: 182 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFHNDVDGNNTIQ------EIL 219
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G + + D LP ++ + + G+P + QA +
Sbjct: 220 IPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQQAREMV 279
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK- 242
++ E +G + + M G + +S G +GE +Q AG +
Sbjct: 280 LEIIREKDQADFRGVRSDFSSR-MGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 338
Query: 243 QPHPLAGLA------VLG-----------IEGIGSTSLTPAALAALSGSRVKSGGKDTGD 285
Q P G++ V+G I + T+ +LS R + G+
Sbjct: 339 QFKPDDGISPERVAQVMGLPERCQHAAHVISDLILTAQERDGFGSLSVPRGRGRGRSDWS 398
Query: 286 -----DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMFHI 336
E + D G VIGK G + I Q SGA + + T+ ++F I
Sbjct: 399 VGAPGGLQEVTYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFTI 458
Query: 337 QGCQEAVSLAQYLIN 351
+G + + LA++LI+
Sbjct: 459 RGIPQQIELARHLID 473
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 139/351 (39%), Gaps = 76/351 (21%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI---TDGACPDRIVTVS 67
T +R L S + + +IG G +R++ +++ A++ + + ++ +T+
Sbjct: 284 RQTDFPLRILVQSDM----VGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIY 339
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
G+ +N + N C + ++ N N+ E C LK
Sbjct: 340 GNPENCT-------------------NACKR---ILEVMQQEANNTNKGEIC------LK 371
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAI 185
++ G +IGKGG IK I + + V+S D+ + ERI+TV G D +S+A
Sbjct: 372 ILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLERIITVKGAIDNMSRAE 431
Query: 186 YQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPH 245
QI L Q + + P+TM + G H
Sbjct: 432 AQISAKL----RQSYENDLQAMAPQTM-----MFPG----------------------LH 460
Query: 246 PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGK 305
P+A +A GI G GS L A G + GD T + + ++ G +IG
Sbjct: 461 PMAMMATAGI-GYGSRGLY-TGQAPYPGMYPAGAAQGGGDSQETTYLYIPNNAVGAIIGT 518
Query: 306 AGSRLLEIRQISGAQINIHTGTES------HKKMFHIQGCQEAVSLAQYLI 350
GS + I + SGA + I E+ +++ I G EA AQYLI
Sbjct: 519 KGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLI 569
>gi|403216407|emb|CCK70904.1| hypothetical protein KNAG_0F02390 [Kazachstania naganishii CBS
8797]
Length = 511
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTV 66
+D+ I M CL V + S ++GP G + +++++ +I+++D +R++ V
Sbjct: 104 VDDYVHIRMLCL------VKDASAVVGPKGDAITHIKRDTNTRINVSDNLKNVRERVIYV 157
Query: 67 SGSVDNSSTSSVE---------------TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHI 111
G +N +++ + G ++ + + + + ED
Sbjct: 158 RGQCENVASAFEQISNCIYNKCKRGLSKNGKNDSNNSLSDEKSTTSTDGSITKEEED--- 214
Query: 112 NRNRMENCSPQPLQ--LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE 169
+ Q L+ L+L++P G +IGK G ++K+I + S A + + L ST+
Sbjct: 215 ---DTDGSKNQQLKISLQLLMPHHLMGYIIGKNGSRLKEIEEASSARLHASPHQLLPSTD 271
Query: 170 RIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEP 209
RI+ + G P +I +AI+ I L+ ++ I Y+P
Sbjct: 272 RILRLSGTPTSIGKAIFHISQTLLLNKDRLKNKKTIFYQP 311
>gi|339236169|ref|XP_003379639.1| putative KH domain protein [Trichinella spiralis]
gi|316977680|gb|EFV60751.1| putative KH domain protein [Trichinella spiralis]
Length = 614
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 74/164 (45%), Gaps = 19/164 (11%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT---DGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG GG +RRL ESGA+I D P+R +SG+++ + T
Sbjct: 300 VGSIIGRGGETIRRLTSESGARIQFKIGEDHNAPERTAVISGTMEQIDRA---------T 350
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+T + N + LE+ + E C + +PA G +IGKGG I
Sbjct: 351 RMITDLVNKSASV-----LLEESAYDCCNFEGCDSDIFYMH--VPANKTGLVIGKGGETI 403
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
K I SGA V+++ + P E++ + G P I+ A + I +
Sbjct: 404 KQINMDSGARVELSRETAPNDWEKVFVIRGTPYQINHATHLIRI 447
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ E + + V T + + + P
Sbjct: 323 RTITVKGTVEACASAEAEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 37/206 (17%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
+ K ED I ++ L H+S+ + LIG G ++++ +++G KI+I+ P
Sbjct: 273 ETKTTED--IPLKILAHNSL----VGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNP 326
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHIN-------- 112
+R +TV GS+D + VE + +N A N + ++N
Sbjct: 327 ERTITVKGSIDACCKAEVEITKKLREAY----ENDIAAINQQANLIPGLNLNALGIFSSG 382
Query: 113 ----------RNRMENCSPQ--PLQ--LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQ 158
R+ + +PQ P Q + L IP G+LIGK G IK + +GA+++
Sbjct: 383 LPVLPPAAGPRSAVPAVAPQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIK 442
Query: 159 VASDMLPMSTERIVTVHGNPDTISQA 184
+A P TER+V + G P+ +A
Sbjct: 443 IAPAESPDVTERMVIITGTPEAQFKA 468
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 120 SPQPLQ----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVH 175
SP+P Q L++++P G++IGK G IKD+ + + V + + E+ +T+H
Sbjct: 191 SPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIH 250
Query: 176 GNPDTISQAIYQICLVL 192
P+ S A I ++
Sbjct: 251 STPEGCSAACRMILDIM 267
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 153/372 (41%), Gaps = 72/372 (19%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
+F V ++ +IG G ++++ +E+ A+I I DG P+R V +S + +
Sbjct: 231 SVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAPL 290
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME-NCSPQPLQLKLVIPATHC 135
S ++D + + + S + R N P +L++P++
Sbjct: 291 S------------PAMDGLLRVHKRITDSSDGESSQPQRSAGNIGP----TRLLVPSSQA 334
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQIC---- 189
GSLIGK G IK I+D S + V++ ++ P ++ +R+V + G P + +A+ I
Sbjct: 335 GSLIGKQGATIKSIQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLR 394
Query: 190 --------LVLIECTLQVVKGAVIPYE---PKTMNAGP-------------VILSGGQAY 225
L L E +++ +P E P + GP GG
Sbjct: 395 KFLVDRSVLPLFEAHMKMHG---MPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNPQ 451
Query: 226 TLHG---EYAVPVQEVAG-KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GG 280
+H + P +V +KQPH G++ G E P + A+ +G++ S G
Sbjct: 452 FMHPRPQDSYYPSPDVPHMEKQPH--YGISAYGRE-------APPSGASATGNQPPSHAG 502
Query: 281 KDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQGC 339
D I L A VIG AG+ + IR+ SGA + I + +M I G
Sbjct: 503 SQVAHDM---HIPLA--YADAVIGAAGASISYIRRHSGATVTIQESRGAPGEMTVEITGT 557
Query: 340 QEAVSLAQYLIN 351
V AQ LI
Sbjct: 558 AAQVQTAQQLIQ 569
>gi|74218201|dbj|BAE43196.1| unnamed protein product [Mus musculus]
Length = 99
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 14 GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 73
Query: 339 CQEAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 74 SAASISLAQYLINV 87
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S Q +L IP G +IG+ G KI +IR +SGA +++A + + ST+R VT+ G+
Sbjct: 16 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGS 74
Query: 178 PDTISQAIYQICLVL 192
+IS A Y I + L
Sbjct: 75 AASISLAQYLINVRL 89
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 86/203 (42%), Gaps = 58/203 (28%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSV 70
ED + ++ L S +IG GG + +L++E+GA I +
Sbjct: 30 EDGELFLKVLIPSYA----AGSIIGKGGQTIVQLQRETGATIKL---------------- 69
Query: 71 DNSSTSSVETGYPGHT----LWVTSVDNVCTAYNFMCRSLEDY----------------- 109
S + YPG T L S + + + +NF+ + +
Sbjct: 70 -----SKSKDFYPGTTERVCLVQGSAEALLSVHNFIAEKVREVPQGAPKNDLGVLLPPQS 124
Query: 110 HINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMST- 168
IN R + Q KL++P T G +IGKGG +++I + SGA VQ++ P +
Sbjct: 125 TINAERAK-------QAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQK--PAGSN 175
Query: 169 --ERIVTVHGNPDTISQAIYQIC 189
ER+VTV G P + +AI+ I
Sbjct: 176 LHERVVTVSGEPSQVQKAIHSII 198
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTI 181
L LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G+
Sbjct: 34 LFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGS---- 89
Query: 182 SQAIYQICLVLIECTLQVVKGA 203
++A+ + + E +V +GA
Sbjct: 90 AEALLSVHNFIAEKVREVPQGA 111
>gi|254585977|ref|XP_002498556.1| ZYRO0G13112p [Zygosaccharomyces rouxii]
gi|332319678|sp|C5E0I9.1|HEK2_ZYGRC RecName: Full=Heterogeneous nuclear rnp K-like protein 2; AltName:
Full=KH domain-containing protein 1
gi|238941450|emb|CAR29623.1| ZYRO0G13112p [Zygosaccharomyces rouxii]
Length = 372
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 163/380 (42%), Gaps = 74/380 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSV-NVNEISCLIGPGGCIVRRLRKESGAKISITDG--A 58
+ +G ++ IT+ + H + ++ E + +IG G ++ +R+ + KI +++
Sbjct: 42 ESKDEGNVELRESITLPTINHRVLLSLKESAKVIGTKGSTIQNVREINHVKIGLSEKQLG 101
Query: 59 CPDRIVTVSGSVDNSSTSS---VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR 115
C DR+++ +G + N + S V G T V+S + A++F+ L R+
Sbjct: 102 CSDRVLSCAGRIINVAHSLGQIVSVLKEGST--VSSAEKY--AFHFLNPILPPP--TRDE 155
Query: 116 MENCSPQPLQL----KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
++ + + +L++ + S+IGKGG +IK +++ + + D LP S ERI
Sbjct: 156 FQDLTLDEINKIGTSRLMVTNSQLSSIIGKGGARIKSLKERHRVKIVASRDFLPDSDERI 215
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
+ + G P+ I+ + QI +L +N + + + Y
Sbjct: 216 LEIQGLPNAITNVLLQISKIL-------------------LNELDITFASERRY------ 250
Query: 232 AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
PH + S+S + A A S S V++G + ++ +
Sbjct: 251 -----------YPH------------LRSSSPSNAVSLAASTSGVQTGASNYLNNEFKAT 287
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES-------HKKMFHIQGCQ-EAV 343
+ + + G + G+ G+R+ +R+ + +I + + + F I G + V
Sbjct: 288 LKIPESYVGAIAGRRGNRIANLRKFTKTKIIVEKKIDKTVIDVDPDNRTFIILGDHFKNV 347
Query: 344 SLAQYLI--NMCIELQKNNT 361
LA+ ++ N+ +E++K +
Sbjct: 348 KLAESMLLKNLDVEIEKRKS 367
>gi|365982209|ref|XP_003667938.1| hypothetical protein NDAI_0A05400 [Naumovozyma dairenensis CBS 421]
gi|343766704|emb|CCD22695.1| hypothetical protein NDAI_0A05400 [Naumovozyma dairenensis CBS 421]
Length = 389
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 93/217 (42%), Gaps = 50/217 (23%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDN 72
I +R L +++ E + +IG G + ++R+ + KI I+D C DRI++ +G ++N
Sbjct: 21 INLRIL----LSLKEAAKIIGLKGSTISKIRENNTVKIGISDKVPGCSDRILSCAGPINN 76
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFM-CRSLEDYHINRNRMENCSPQPLQ------ 125
S + G + + + + T N + LE Y + + N P P
Sbjct: 77 VSNAI------GDCIEILNEIDFDTNGNVLPSLKLEKYSFHF--LNNILPPPSSAELKPP 128
Query: 126 -----------------------------LKLVIPATHCGSLIGKGGCKIKDIRDLSGAN 156
++L+I H S+IGKGG KIK + G
Sbjct: 129 SHGNDEQQQEGEEEEEVAEEEIDLNKIGTVRLIISNHHLSSIIGKGGNKIKSLISKHGVK 188
Query: 157 VQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
+ + D LP S ER++ + G P +I+ + +C +L+
Sbjct: 189 IVASKDFLPDSQERLLEIQGFPGSITNVLIDVCEILL 225
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 129/312 (41%), Gaps = 58/312 (18%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG ++ L+ +S +I ++ +R++ ++GS+ + V +
Sbjct: 35 SIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSI--AGVRQV------NR 86
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ V A + + D NRNR QLK+++P G +IGKGG I
Sbjct: 87 FILEKVSEEGKADKAIQYGVLDK--NRNR---------QLKMIVPNAAAGVIIGKGGSNI 135
Query: 147 KDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVI 205
K+I+D SGA+VQV+ + ERI+TV G ++ + L++ +C L+ +
Sbjct: 136 KEIQDKSGAHVQVSQKKAQYAIDERILTVTGE---FNERLTAWELIIWKC-LEDINNL-- 189
Query: 206 PYEPKTMNAGPVILSGGQAYTLHGEYA-------VPVQEVAGKKQPHPLAGLAVLGI--- 255
P T + + G LH Y P+ A P+ + +
Sbjct: 190 ---PNTSVSYSHVEPAGTLPALHSNYYGGGNANDRPMDSSAASYDPYTSERYSPTQVTQD 246
Query: 256 ----EGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLL 311
G S P A +R S G+ +I + D I G ++GK G +
Sbjct: 247 AQADRQYGMQSYPPTA----RNNRPSSYGETV------IKIPVPDSIIGAILGKRGKVIS 296
Query: 312 EIRQISGAQINI 323
+I+ ISGA I +
Sbjct: 297 DIQNISGAHIQV 308
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 117 ENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTV 174
+N S + LKL+IP GS+IGKGG I D+++ S ++++ +D P + ER++ +
Sbjct: 15 DNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVI 74
Query: 175 HG 176
G
Sbjct: 75 TG 76
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+K+ +P + G+++GK G I DI+++SGA++QV+ D +P + +R VTV G D
Sbjct: 275 IKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTKDREVTVTGTNDAAHY 334
Query: 184 A 184
A
Sbjct: 335 A 335
>gi|324506586|gb|ADY42808.1| RNA-binding protein Nova-2 [Ascaris suum]
Length = 565
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 32/190 (16%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG-----ACPDRI 63
+D + + ++ L S+ + +IG GG +R L+ ESG ++ ++ +RI
Sbjct: 61 VDNEESVQVKILIPSAA----VGAIIGKGGETMRSLKNESGCRLQMSKNQEVYHGTNERI 116
Query: 64 VTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP 123
V G + S ++ VD N C + ++R +
Sbjct: 117 CLVKGKI----ASVMKVVEVVMEKIKEKVDP-----NTPCDVYDHKGVDRTK-------- 159
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV----ASDMLPMSTERIVTVHG-NP 178
++KL++P T G +IGK G +IK+IRD +GAN+QV S +S ER++T+ +
Sbjct: 160 -EMKLLVPNTSAGMVIGKSGARIKEIRDQTGANIQVYPKAGSQEAKVSLERVITIAADDS 218
Query: 179 DTISQAIYQI 188
D + AI ++
Sbjct: 219 DVLMNAIQRV 228
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 32/205 (15%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
+ K ED I ++ L H+S+ + LIG G ++++ +++G KI+I+ P
Sbjct: 273 ETKTTED--IPLKILAHNSL----VGRLIGKEGRNLKKIEEDTGTKITISSLQDLTIYNP 326
Query: 61 DRIVTVSGSVDNSSTSSVE------TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHI--- 111
+R +TV GS+D + VE Y + N+ N + +
Sbjct: 327 ERTITVKGSIDACCKAEVEITKKLREAYENDIAAINQQANLIPGLNLNALGIFSSGLPVL 386
Query: 112 ------------NRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV 159
+ M +P+ + L IP G+LIGK G IK + +GA++++
Sbjct: 387 PPAAGPPTRIPPSSPEMSQSAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI 446
Query: 160 ASDMLPMSTERIVTVHGNPDTISQA 184
A P TER+V + G P+ +A
Sbjct: 447 APAESPDVTERMVIITGTPEAQFKA 471
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 120 SPQPLQ----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVH 175
SP+P Q L++++P G++IGK G IKD+ + + V + + E+ +T+H
Sbjct: 191 SPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIH 250
Query: 176 GNPDTISQAIYQICLVL 192
P+ S A I ++
Sbjct: 251 STPEGCSAACRMILDIM 267
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 96/252 (38%), Gaps = 46/252 (18%)
Query: 103 CRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS- 161
CR + D + + E + + + LK++ + G LIGK G +K I + +G + ++S
Sbjct: 260 CRMILDI-MQKEANETKTTEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSL 318
Query: 162 -DMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS 220
D+ + ER +TV G+ D +A +I L E YE +
Sbjct: 319 QDLTIYNPERTITVKGSIDACCKAEVEITKKLREA-----------YE------NDIAAI 361
Query: 221 GGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGG 280
QA + G L LGI G L PAA +R+
Sbjct: 362 NQQANLIPG------------------LNLNALGIFSSGLPVLPPAAGPP---TRIPPSS 400
Query: 281 KDTGDDFVETEIV---LTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH--KKMFH 335
+ E E+V + G +IGK G + ++ +GA I I ++M
Sbjct: 401 PEMSQSAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVI 460
Query: 336 IQGCQEAVSLAQ 347
I G EA AQ
Sbjct: 461 ITGTPEAQFKAQ 472
>gi|195192381|ref|XP_002029601.1| GL15268 [Drosophila persimilis]
gi|194104043|gb|EDW26086.1| GL15268 [Drosophila persimilis]
Length = 91
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESH 330
S S++++ + E+ +++D+ GC+IGK G+++ EIRQISGA I I E
Sbjct: 5 WSWSQLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE 64
Query: 331 ----KKMFHIQGCQEAVSLAQYLINM 352
+ I G ++V+LAQYLINM
Sbjct: 65 GGNTDRTITISGNPDSVALAQYLINM 90
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPD 179
Q Q ++ + G +IGKGG KI +IR +SGA +++++ + +T+R +T+ GNPD
Sbjct: 20 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGNTDRTITISGNPD 79
Query: 180 TISQAIYQICL 190
+++ A Y I +
Sbjct: 80 SVALAQYLINM 90
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 133/312 (42%), Gaps = 54/312 (17%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS-------SVE 79
+I ++G GG IV+ LR+E+ AKI + D +R++ + D S + S
Sbjct: 56 KIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDEAAQNISNN 115
Query: 80 TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLI 139
G L + D + ++ + + ED H ++ + + ++++P G L+
Sbjct: 116 DGSENMKLQCFAQDALLKIHDKIS-THEDPHDGAIHEKSETAADVTARILVPGNQVGCLL 174
Query: 140 GKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLVLIEC 195
GKGG I+ +R+ +GA +++ S LP + ++ +V + G P + +A+Y+I L +
Sbjct: 175 GKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQ- 233
Query: 196 TLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEV------AGKKQPHPLAG 249
P+ N P++E+ ++ P PL
Sbjct: 234 ------------HPRKENP-------------------PLEEIIDASTQRKRESPPPLPH 262
Query: 250 LAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSR 309
++ + L P L SR ++F I+ ++ G VIGK+G+
Sbjct: 263 ENLM-LPYQHVDRLPPMPLLDPYRSRPSQYPVPEAEEF-SVRILCASELIGPVIGKSGAN 320
Query: 310 LLEIRQISGAQI 321
+ ++ Q +GA+I
Sbjct: 321 VRQVEQQTGARI 332
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L+IP + GS++G GG + +IR +SGA +++ P S+E I+ + G PD + A
Sbjct: 689 LELMIPNSSLGSVLGAGGVNLAEIRQISGARMKLLEGH-PGSSESIMEIQGMPDQVRAA 746
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 216 PVILSGGQAYTLHGEYA--VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSG 273
P+ S G Y H Y +P + + G LG+ G+++ A
Sbjct: 617 PLSASPGADYMTHRSYRNHMPTDSYSSR-------GTQELGVARAGNSN----AYDYTEA 665
Query: 274 SRVKSGGKD-------TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG 326
+R G +D TG E+++ + G V+G G L EIRQISGA++ + G
Sbjct: 666 ARQMHGREDYQRLAGVTGYSSSSLELMIPNSSLGSVLGAGGVNLAEIRQISGARMKLLEG 725
Query: 327 TE-SHKKMFHIQGCQEAVSLAQYLINMCI 354
S + + IQG + V AQ L+ I
Sbjct: 726 HPGSSESIMEIQGMPDQVRAAQSLLQGFI 754
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITD---GACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
I +IG G VR++ +++GA+I + + A +R++ +S S E PG
Sbjct: 310 IGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLS---------SKEI--PGDP 358
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ +++ + ++ + S E H L +LV+P++ G ++G+GG I
Sbjct: 359 V-SPAIEALILLHSKVSASSEKRH-------------LITRLVVPSSKVGCILGEGGKVI 404
Query: 147 KDIRDLSGANVQVASDMLPMS----TERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
++R GA ++V S E +V V G PD A+ +I L TL+
Sbjct: 405 TEMRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLRTRTLR 460
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 112 NRNRMEN------CSPQPLQ--LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM 163
NR R+ + S QP++ +++ P GS++G+GG +K +R+ + A ++VA D
Sbjct: 26 NRKRLNSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIVKALREETKAKIRVA-DS 84
Query: 164 LPMSTERIVTVHGNPDTISQ 183
+P + ER++ + D Q
Sbjct: 85 IPGAEERVIIIFDYQDQSEQ 104
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 154/370 (41%), Gaps = 69/370 (18%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G ++++ +E+ A+I I DG P+R V +S + +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME-NCSPQPLQLKLVIPATH 134
S ++D + + + S + R N P +L++P++
Sbjct: 180 LS------------PAMDGLLRVHKRITDSSDGESSQPQRSAGNIGP----TRLLVPSSQ 223
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQIC--- 189
GSLIGK G IK I+D S + V++ ++ P ++ +R+V + G P + +A+ I
Sbjct: 224 AGSLIGKQGATIKSIQDSSKSIVRIVENVPPVALNDDRVVEIQGEPLGVQKAVELISSHL 283
Query: 190 ---------LVLIECTLQVVKGAVIPYE---PKTMNAGP--------VILSGGQAYTLHG 229
L L E +++ +P E P + GP I GG + +
Sbjct: 284 RKFLVDRSVLPLFEAHMKMHG---MPREQPVPPPQHWGPPQTWIRPPNIPPGGPGFGGNP 340
Query: 230 EYAVPVQEVAG------KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GGKD 282
++ P + + +KQPH G++ G E P + A+ +G++ S G
Sbjct: 341 QFMPPRPQDSYYPPPDVEKQPH--YGISAYGRE-------APPSGASATGNQPPSHAGSQ 391
Query: 283 TGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQGCQE 341
D I L A VIG AG+ + IR+ SGA + I + M I G
Sbjct: 392 VAHDM---HIPLA--YADAVIGAAGASISYIRRHSGATVTIQESRGAPGDMTVEITGTAA 446
Query: 342 AVSLAQYLIN 351
V AQ LI
Sbjct: 447 QVQTAQQLIQ 456
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 92/174 (52%), Gaps = 21/174 (12%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+I +IG GG I ++LR ++ AKI I + C +R++T+ S + T++VE
Sbjct: 49 RKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSS--SRETNTVED----- 101
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ---LKLVIPATHCGSLIGKG 142
+ D VC A + + R E + + + + L ++L++P+ G +IGKG
Sbjct: 102 -----TEDKVCPAQDALFRVHEKLITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKG 156
Query: 143 GCKIKDIRDLSGANVQVAS-DMLP---MSTERIVTVHGNPDTISQAIYQICLVL 192
G I+ IR +G++++V S + LP +S + ++ + G+P + +A+ Q+ L
Sbjct: 157 GHIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVVRKALLQVSSRL 210
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 11/93 (11%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPDTIS 182
+L++ + G LIGKGG I +IR S AN+++ S + E +V + G+ D
Sbjct: 368 RLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGDLDVAK 427
Query: 183 QAIYQICLVLI------ECTLQVVKGAVIPYEP 209
A+ QI L E +L + VIPY P
Sbjct: 428 HALVQITTRLKANFFEREGSLSGFQ-PVIPYHP 459
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 101/216 (46%), Gaps = 34/216 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
I R L S V +IG GG +R LR+E A I+I + P+R++ +
Sbjct: 96 IWCRFLIPSKV----AGAIIGRGGATIRALREEYQAIINIPEARAPERVLKIC------- 144
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
+S ET HT+ V+ + + N + H N R E + +L++++ ++
Sbjct: 145 VNSRETL---HTI-VSQIAEILKNEN-----AKGSH-NGRRKEGET----ELRILVQSSQ 190
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
G++IG G +K++R+ +G+ + + + P S+ER+ + G P T+ + C+ +I
Sbjct: 191 AGAIIGTKGSTVKNLRETTGSRININPECCPNSSERVAAIMGPPATVVK-----CISMIY 245
Query: 195 CTLQVV--KGAVIPYEPKTMNAGPVILSGGQAYTLH 228
L+ V KG Y+P + P GG + +
Sbjct: 246 DILERVPAKGNEQRYDPNMFD--PTYDYGGYGFDMR 279
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 38/351 (10%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G +++++ E+ A+I + D PDR+V +SG D +
Sbjct: 61 CVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPL 120
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
S ++D V + + E N + ++L++ +T
Sbjct: 121 S------------PAMDAVIRVFKRVSGLPEG---NAQELGAAGIAFSSIRLLVASTQAI 165
Query: 137 SLIGKGGCKIKDIRDLSGANVQVASD-MLPM---STERIVTVHGNPDTISQAIYQICLVL 192
+LIGK G IK I++ +GA+V+V S+ +P + ERIV + G + +A+ I L
Sbjct: 166 NLIGKQGSIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHL 225
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL-- 250
+ +V +V+P K NA +I QA T + +PL+G
Sbjct: 226 RKF---LVDHSVLPLFEKNYNA--LISLDRQAETWSDRSSFHTTSQGRIDIDYPLSGKRD 280
Query: 251 AVLGIEGIGSTSLTPAALAALSG-----SRVKSGGKDTGDDFVETEIVLTDDI----AGC 301
A+L S P + +L G S V+S + + T++ T + A
Sbjct: 281 ALLLERETPFESQVPLSRISLYGQDPAISSVRSSVFNRSSVPIVTQVTQTMQVPISYAEE 340
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTESHKKMF-HIQGCQEAVSLAQYLIN 351
+IG G+ + IR+ SGA I ++ ++ I+G V +AQ LI
Sbjct: 341 IIGIRGNNIEYIRRTSGAIITVNESRGLPDEIIVEIKGTASEVQMAQQLIQ 391
>gi|355733306|gb|AES10986.1| poly binding protein 2 [Mustela putorius furo]
Length = 94
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G
Sbjct: 11 GLDASAQTSSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTITG 70
Query: 339 CQEAVSLAQYLINM 352
++SLAQYLIN+
Sbjct: 71 SAASISLAQYLINV 84
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 118 NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+ S Q +L IP G +IG+ G KI +IR +SGA +++A + + ST+R VT+ G+
Sbjct: 13 DASAQTSSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSTDRQVTITGS 71
Query: 178 PDTISQAIYQICLVL 192
+IS A Y I + L
Sbjct: 72 AASISLAQYLINVRL 86
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 161/390 (41%), Gaps = 60/390 (15%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 58 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 117
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H + + +++
Sbjct: 118 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFHNDVDGNNTIQ------EIL 155
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP ++ + + G+P + QA +
Sbjct: 156 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV 215
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK- 242
++ E +G + + + G + +S G +GE +Q AG +
Sbjct: 216 LEIIREKDQADFRGVRGDFSSR-LGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 274
Query: 243 QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSG-GKDTGDDF 287
Q P G++ V+G I LT G V G G+ GD
Sbjct: 275 QFKPDDGVSPERAAQVMGPPDRCQHAAHIINELILTAQERDGFGGLAVARGRGRSRGDWN 334
Query: 288 VET-----EIVLT--DDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMFHI 336
+ T EI T D G VIGK G + I Q SGA + + T+ ++F I
Sbjct: 335 MGTAGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRIFTI 394
Query: 337 QGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
+G + + +A++LI+ + ++ N ++
Sbjct: 395 RGVPQQIEVARHLIDEKVGVRTQPFPNLAN 424
>gi|313223506|emb|CBY41924.1| unnamed protein product [Oikopleura dioica]
Length = 317
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 29/185 (15%)
Query: 41 VRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN 100
++ LR + ++++ D P+R++ ++S+ S + + V N+
Sbjct: 2 IKSLRSDFACQLNVPDAQGPERVLRFV--CEDSNVSPL----------IEKVGNL----- 44
Query: 101 FMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA 160
L + + RNR + S + +++++ + G++IG G IK +RD +G + V
Sbjct: 45 -----LRNDMVERNRAQADSD--IDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVY 97
Query: 161 SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILS 220
D P S++R++ V G PD I+ +I L+L + KG V ++P+ NA
Sbjct: 98 QDPAPHSSDRLIKVAGQPDKIATCFGEILLILNDIP---PKGFVQEFDPE--NADSTFDY 152
Query: 221 GGQAY 225
GG AY
Sbjct: 153 GGFAY 157
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 86/397 (21%), Positives = 158/397 (39%), Gaps = 79/397 (19%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G ++++ +E+ A+I I DG +R V VS + S
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHC 135
++D + + + L+ + + + + + +L++PA+
Sbjct: 211 ------------LPPAMDGLLRVHKRIVDGLDG---DSSHASSGTGTKVSTRLLVPASQA 255
Query: 136 GSLIGKGGCKIKDIRDLSGANVQV--ASDM--LPMSTERIVTVHGNPDTISQAIYQIC-- 189
GSLIGK G +K I++ S V+V A D+ + +R+V V G+ + +A+ I
Sbjct: 256 GSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASH 315
Query: 190 ----------LVLIECTLQVVKGAVIPYEPKTMNAGPVI-----LSGGQAYTLHGEYAVP 234
+ L E +Q+ + + P + GP GG Y + +Y P
Sbjct: 316 LRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYG-NPQYMPP 374
Query: 235 VQEVAG-----------KKQPH----PLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
+++ +KQPH A +G+ G ++ P+ + ++
Sbjct: 375 PRQIENYYPPADLPPPMEKQPHQGISAYGREAPMGVHGSSNSQAAPSMITQIT------- 427
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQG 338
+ +I L+ A VIG AG+ + IR+ SGA + I +M I G
Sbjct: 428 --------QQMQIPLS--YADAVIGTAGTSISYIRRASGATVTIQETRGVPGEMTVEISG 477
Query: 339 CQEAVSLAQYLINMCI-------ELQKNNTTNTSDNP 368
V AQ LI + + Q +T+ NP
Sbjct: 478 TASQVQTAQQLIQNFMAEAGAPTQAQTGGSTDQGYNP 514
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 74/344 (21%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G +++++ +E+ A+I I DG +R V VSG + S+
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHC 135
S+D + + + L + + P + +L++PA+
Sbjct: 246 ------------LPPSMDGLLRVHMRIVDGL-----DGEASQAPPPSKVSTRLLVPASQA 288
Query: 136 GSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLV 191
GSLIGK G +K I++ S V+V S+ LP + +R+V V G P ++ +A+ I
Sbjct: 289 GSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASH 348
Query: 192 LIECTLQVVKGAVIPYEPKTMNA---------------------GPVILSGGQAYTL--- 227
L + +V ++IP+ M P + GG +
Sbjct: 349 LRKF---LVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPY 405
Query: 228 ------HGEYAVP--VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
H Y P +++ +KQPH G++ G E + ++ A + +V
Sbjct: 406 MQPPPRHDSYYPPPEMRQPPMEKQPH--QGISAYGREPPMNVHVSSA--PPMVAQQVTQ- 460
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ +I L+ A VIG +GS + R++SGA + I
Sbjct: 461 ---------QMQIPLS--YADAVIGTSGSNISYTRRLSGATVTI 493
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 74/344 (21%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G +++++ +E+ A+I I DG +R V VSG + S+
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHC 135
S+D + + + L + + P + +L++PA+
Sbjct: 246 ------------LPPSMDGLLRVHMRIVDGL-----DGEASQAPPPSKVSTRLLVPASQA 288
Query: 136 GSLIGKGGCKIKDIRDLSGANVQV-ASDMLP---MSTERIVTVHGNPDTISQAIYQICLV 191
GSLIGK G +K I++ S V+V S+ LP + +R+V V G P ++ +A+ I
Sbjct: 289 GSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASH 348
Query: 192 LIECTLQVVKGAVIPYEPKTMNA---------------------GPVILSGGQAYTL--- 227
L + +V ++IP+ M P + GG +
Sbjct: 349 LRKF---LVDRSIIPFFENQMQKPTRQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPY 405
Query: 228 ------HGEYAVP--VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSG 279
H Y P +++ +KQPH G++ G E + ++ A + +V
Sbjct: 406 MQPPPRHDSYYPPPEMRQPPMEKQPH--QGISAYGREPPMNVHVSSA--PPMVAQQVTQ- 460
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ +I L+ A VIG +GS + R++SGA + I
Sbjct: 461 ---------QMQIPLS--YADAVIGTSGSNISYTRRLSGATVTI 493
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 112/260 (43%), Gaps = 61/260 (23%)
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD--MLPMSTERIVTVHGNPD 179
QP Q+ LV+P + CG +IGKGG KI+ + S A++++++ MLP +R +T+ G D
Sbjct: 127 QP-QVALVVPNSSCGCIIGKGGSKIRSFVEDSQADIKLSNQDRMLPGCNDRTLTITGTID 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA-GPVILSGGQAYTLHGEY--AVPVQ 236
+ +A+ + L E A + + T + P+ L GG GE+ A P +
Sbjct: 186 CVLRAVALVATTLCEDPAY----ATLVHRQSTYSVQSPLSLQGGGGGRRSGEFNRATPRR 241
Query: 237 EVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLT- 295
AG + GG+D ET I++T
Sbjct: 242 YGAG------------------------------------QGGGRDD-----ETSILVTI 260
Query: 296 -DDIAGCVIGKAGSRLLEIRQISGAQINI------HTGTESHKKMFHIQGCQEAVSLAQY 348
D + G V+G+ G + E++ SG +I + GT + K + I G E V +A Y
Sbjct: 261 PDSLIGAVLGRGGRTIAEVQVASGCRIKVSDRDDFFEGTRNRKVV--ISGSAEGVQMANY 318
Query: 349 LINMCIELQKNNTTNTSDNP 368
L+ + + + +NP
Sbjct: 319 LLTQKLSAITAQMSFSGENP 338
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTI 181
LK +I + GS+IGKGG I + + L+GA +Q++ ++ P + +R+V V G+ I
Sbjct: 45 FTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVVIVSGDLSAI 104
Query: 182 SQAIYQICLVLI 193
Q ++ I L+
Sbjct: 105 LQVLHLIITKLV 116
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F + ++ +IG G ++++ +ES A+I I DG P+R V +S + +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATH 134
S ++D + Y + + D + N P +L++PA+
Sbjct: 167 IS------------PAMDGLFRVYKRITDGSDGDSGQPERNISNVGP----TRLLVPASQ 210
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP---MSTERIVTVHGNPDTISQAIYQIC 189
GSLIGK G IK I+D S + V++ + LP ++ +R+V + G P + +A+ I
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
>gi|395733400|ref|XP_003776231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 466
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S + G GG ++ L + A +S+ D + P RI+++S +D
Sbjct: 40 DEMVELRILLQS----KNAGAMTGKGGENIKALPTDYSASVSVPDSSGPQRILSISADID 95
Query: 72 ------NSSTSSVETGYPGHTLWVTSV-----DNV-CTAYNFMCRSLEDYHINRNRMENC 119
++E G + TS D V C Y S DY
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLEPDAVECLNYQHYKGSDFDY---------- 145
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+L+L+I + G +I G KIK++R+ + +++ + P ST+R+V + G PD
Sbjct: 146 -----ELRLLIHQSLAGGIIRVKGVKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPD 200
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV 235
+ + I I ++ E +KG PY+ + GG +A PV
Sbjct: 201 WVVECIKLILDLISESP---IKGRAQPYDRNFYDE--TYDYGGFTMMFDDRFARPV 251
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
P + + +G R G D G + T++ + D+AG +IGK G R+ +I SGA I I
Sbjct: 367 PGYVYSYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKID 424
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G QE + AQYL+ ++
Sbjct: 425 EPLEGSEDRIITITGTQEQIQNAQYLLQNSVK 456
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK I SGA++++ + L S +RI+T+ G + I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQNAQY 449
Query: 187 QICLVLIECTLQVVK 201
L++ +++ VK
Sbjct: 450 -----LLQNSVKHVK 459
>gi|395733398|ref|XP_003776230.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Pongo abelii]
Length = 464
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 36/236 (15%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S + G GG ++ L + A +S+ D + P RI+++S +D
Sbjct: 40 DEMVELRILLQS----KNAGAMTGKGGENIKALPTDYSASVSVPDSSGPQRILSISADID 95
Query: 72 ------NSSTSSVETGYPGHTLWVTSV-----DNV-CTAYNFMCRSLEDYHINRNRMENC 119
++E G + TS D V C Y S DY
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLEPDAVECLNYQHYKGSDFDY---------- 145
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+L+L+I + G +I G KIK++R+ + +++ + P ST+R+V + G PD
Sbjct: 146 -----ELRLLIHQSLAGGIIRVKGVKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPD 200
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPV 235
+ + I I ++ E +KG PY+ + GG +A PV
Sbjct: 201 WVVECIKLILDLISESP---IKGRAQPYDRNFYDE--TYDYGGFTMMFDDRFARPV 251
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 265 PAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH 324
P + + +G R G D G + T++ + D+AG +IGK G R+ +I SGA I I
Sbjct: 367 PGYVYSYAGGRGSYG--DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKID 424
Query: 325 TGTE-SHKKMFHIQGCQEAVSLAQYLINMCIE 355
E S ++ I G QE + AQYL+ ++
Sbjct: 425 EPLEGSEDRIITITGTQEQIQNAQYLLQNSVK 456
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK I SGA++++ + L S +RI+T+ G + I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQICHESGASIKI-DEPLEGSEDRIITITGTQEQIQNAQY 449
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F + ++ +IG G ++++ +ES A+I I DG P+R V +S + +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATH 134
S ++D + Y + + D + N P +L++PA+
Sbjct: 167 IS------------PAMDGLFRVYKRITDGSDGDSGQPERNISNVGP----TRLLVPASQ 210
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP---MSTERIVTVHGNPDTISQAIYQIC 189
GSLIGK G IK I+D S + V++ + LP ++ +R+V + G P + +A+ I
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 83/176 (47%), Gaps = 21/176 (11%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
+F V ++ +IG G ++++ +ES A+I + +G A P+R V +S +
Sbjct: 107 SVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMIS------AKD 160
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME-NCSPQPLQLKLVIPATHC 135
+T P +VD + + + LE R N P +L++PA+
Sbjct: 161 EPDTELP------PAVDGLLRVHRRITDGLETETDQPQRATVNTGP----TRLLVPASQA 210
Query: 136 GSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQIC 189
GSLIGK G IK I+D S +++ ++ P ++ +R+V + G P +A+ I
Sbjct: 211 GSLIGKQGATIKSIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIA 266
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F + ++ +IG G ++++ +ES A+I I DG P+R V +S + +
Sbjct: 109 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 168
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATH 134
S ++D + Y + + D + N P +L++PA+
Sbjct: 169 IS------------PAMDGLFRVYKRITDGSDGDSGQPERNISNVGP----TRLLVPASQ 212
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP---MSTERIVTVHGNPDTISQAIYQIC 189
GSLIGK G IK I+D S + V++ + LP ++ +R+V + G P + +A+ I
Sbjct: 213 AGSLIGKQGATIKSIQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 269
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 22/195 (11%)
Query: 10 DEDTLITMR--CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
D D+L+ R +F V +I +IG GG IV++LR ++ +KI I + C +R++T
Sbjct: 33 DRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVIT 92
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP--QP 123
+ D ET G V S A + + R + + + E+ S Q
Sbjct: 93 IYSPSD-------ETNAFGDGEKVLS-----PAQDALFRIHDRVVADDAQSEDSSEGEQQ 140
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPD 179
+ KL++P+ G ++G+GG +++IR +GA +++ D + ++++ ++ + G
Sbjct: 141 VTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVL 200
Query: 180 TISQAIYQICLVLIE 194
+ +A++QI L E
Sbjct: 201 IVKKALHQIASRLHE 215
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 38/203 (18%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISI----TDGACPDRIVTVSGSVDNSSTSSVETGY 82
V I+ +IG GG ++ +LR+E+ A I + T+G D ++T+S + E Y
Sbjct: 288 VENIASVIGKGGALINQLRQETRATIKVDSSRTEGN--DCLITIS------AREVFEDAY 339
Query: 83 PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKG 142
V + C+ + R+ +L++P++ G ++GKG
Sbjct: 340 SPTIEAVMRLQPKCSE-----------KVERD----SGLVSFTTRLLVPSSRIGCILGKG 384
Query: 143 GCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
G I ++R ++ AN+++ + LP + +V + G D +A+ QI L +
Sbjct: 385 GAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRL-RANVF 443
Query: 199 VVKGA------VIPYEPKTMNAG 215
+GA V+PY P ++G
Sbjct: 444 DREGAVSALMPVLPYVPVAPDSG 466
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G ++++ +ES A+I + +G A P+R V +S +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPD-- 163
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME-NCSPQPLQLKLVIPATH 134
T +VD + + + LE R N P +L++PA+
Sbjct: 164 ----------TELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGP----TRLLVPASQ 209
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQICLVL 192
GSLIGK G IK I+D S +++ ++ P ++ +R+V + G P +A+ I L
Sbjct: 210 AGSLIGKQGATIKSIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|226470354|emb|CAX70457.1| Heterogeneous nuclear ribonucleoprotein K [Schistosoma japonicum]
Length = 370
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 76/161 (47%), Gaps = 33/161 (20%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSV 92
+IG GG ++++R+E K++I D P+R++ + G + +
Sbjct: 23 IIGKGGENIKKIREEYSVKVTIPDSNGPERVLVLDGDLGSI------------------- 63
Query: 93 DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDL 152
+E + N +M+N + + L+L++ + G +IG+GG KIK++R+
Sbjct: 64 -------------IEIFRENLEKMQNNRDEGVDLRLLVHYSQAGCVIGRGGYKIKELREQ 110
Query: 153 SGANVQVASDML-PMSTERIVTVHGNPDTISQAIYQICLVL 192
SG + ML P ST+R++ + G+ + + I +L
Sbjct: 111 SGLHTLKVYQMLCPSSTDRVIQLVGDVGKVLNCLQSIAELL 151
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 121 PQPLQLKLVIPATHC---------GSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
P + + L+ P T G+++G+ GC+I +R S A++++ S + P +RI
Sbjct: 284 PNRMAMSLLTPTTSTQVSVSNKMIGAIMGRSGCRINQVRHESNADIKI-SKLEPGVEDRI 342
Query: 172 VTVHGNPDTI--SQAIYQICL 190
+T+ G P+ I +Q + Q+C+
Sbjct: 343 ITITGTPEQIQNAQFLLQMCV 363
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI---HTGTESHKKMFHIQGCQEAVSLA 346
T++ +++ + G ++G++G R+ ++R S A I I G E ++ I G E + A
Sbjct: 298 TQVSVSNKMIGAIMGRSGCRINQVRHESNADIKISKLEPGVED--RIITITGTPEQIQNA 355
Query: 347 QYLINMCIE 355
Q+L+ MC++
Sbjct: 356 QFLLQMCVK 364
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G ++++L E+ A++ + D PDRI+ +SG + +
Sbjct: 70 CVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAI 129
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQL---KLVIPAT 133
S ++D V + + ++ EN P + L +L++ +T
Sbjct: 130 S------------PAMDAVIRIFKRVS------GLSETDSENKGPAGVTLCSIRLLVAST 171
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVAS----DMLPMSTERIVTVHGNPDTISQAIYQIC 189
SLIGK G I+ I++ SGA+V+V S + ERIV + G + +A+ +
Sbjct: 172 QAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVI 231
Query: 190 LVLIECTLQVVKGAVIPYEPKTMNA 214
L + +V +++P KT NA
Sbjct: 232 GHLRKF---LVDHSILPVYEKTYNA 253
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 21/180 (11%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G ++++ +ES A+I + +G A P+R V +S +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPD-- 163
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME-NCSPQPLQLKLVIPATH 134
T +VD + + + LE R N P +L++PA+
Sbjct: 164 ----------TELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGP----TRLLVPASQ 209
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQICLVL 192
GSLIGK G IK I+D S +++ ++ P ++ +R+V + G P +A+ I L
Sbjct: 210 AGSLIGKQGATIKSIQDASKCVLRIVENVPPVALNDDRVVEIQGEPHDSHKAVELIASHL 269
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 101
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 161
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+ I + E
Sbjct: 162 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 382 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 435
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 436 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 472
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 184 AIYQIC 189
A Y I
Sbjct: 460 AQYLIT 465
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 10 DEDTLITMR--CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
D D+L+ R +F V +I +IG GG IV++LR ++ +KI I + C +R++T
Sbjct: 39 DRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVIT 98
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
+ D ET G V S A + + R + + R E+ Q
Sbjct: 99 IYSPSD-------ETNAFGDGEKVLS-----PAQDALFRIHDRVVADDARSEDSPEGEKQ 146
Query: 126 L--KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPD 179
+ KL++P+ G ++G+GG +++IR +GA +++ D + ++++ ++ + G
Sbjct: 147 VTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVL 206
Query: 180 TISQAIYQICLVLIE 194
+ +A+ QI L E
Sbjct: 207 IVKKALLQIASRLHE 221
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 53/314 (16%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGH 85
I +IG GG +++++R +GA+I + C +R++++S S + PG
Sbjct: 40 TRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSSDE-----------PGA 88
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ----LKLVIPATHCGSLIGK 141
L CR+ E ++R+ +++++ G ++GK
Sbjct: 89 EL---------------CRAQEALFAVQSRLSEADAAQEDTCCVVRMLVEQAQVGCVLGK 133
Query: 142 GGCKIKDIRDLSGANVQVASDM-LPM---STERIVTVHGNPDTISQAIYQICLVLIECTL 197
GG I D+R +GAN++V+ LP S + +V V G +S A+ Q+ +L +
Sbjct: 134 GGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQ 193
Query: 198 QVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEG 257
+ + A P T N T AV ++ ++QP LA +
Sbjct: 194 RKPQQA---RAPMTFN-----------ITAVATAAVQPEQAQHRRQPMREPVLAPIARPH 239
Query: 258 IGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQIS 317
L P A A R+ + + + V+ +++ GCVIG+ G + IR +
Sbjct: 240 QCHNCL-PDAHAM--QPRMTAVQEASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDT 296
Query: 318 GAQINIHTGTESHK 331
GA I +H G++ +
Sbjct: 297 GAHIKVHEGSQGAR 310
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTV 174
++ +L+ PAT G++IGKGG I+ +RD +GA ++V ++ S ER++++
Sbjct: 31 VEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCS-ERLISL 80
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 101
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 161
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+ I + E
Sbjct: 162 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 382 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 435
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 436 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 472
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 184 AIYQIC 189
A Y I
Sbjct: 460 AQYLIT 465
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 62 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 100
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 101 IQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 160
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+ I + E
Sbjct: 161 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAVELIIQKIQE 218
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 381 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 434
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 435 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 471
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 103
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 184 AIYQIC 189
A Y I
Sbjct: 459 AQYLIT 464
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 10 DEDTLITMR--CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
D D+L+ R +F V +I +IG GG IV++LR ++ +KI I + C +R++T
Sbjct: 39 DRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVIT 98
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
+ D ET G V S A + + R + + R E+ Q
Sbjct: 99 IYSPSD-------ETNAFGDGEKVLS-----PAQDALFRIHDRVVADDARSEDSPEGEKQ 146
Query: 126 L--KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD----MLPMSTERIVTVHGNPD 179
+ KL++P+ G ++G+GG +++IR +GA +++ D + ++++ ++ + G
Sbjct: 147 VTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVL 206
Query: 180 TISQAIYQICLVLIE 194
+ +A+ QI L E
Sbjct: 207 IVKKALLQIASRLHE 221
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 40/204 (19%)
Query: 27 VNEISCLIGPGGCIVRRLRKESGAKISI----TDGACPDRIVTVSGSVDNSSTSSVETGY 82
V I+ +IG GG ++ +LR+E+ A I + T+G D ++T+S + E Y
Sbjct: 292 VENIASVIGKGGALINQLRQETRATIKVDSSRTEGN--DCLITIS------AREVFEDAY 343
Query: 83 PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ-PLQLKLVIPATHCGSLIGK 141
V + C+ +++E S +L++P++ G ++GK
Sbjct: 344 SPTIEAVMRLQPKCS----------------DKVERDSGLVSFTTRLLVPSSRIGCILGK 387
Query: 142 GGCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTL 197
GG I ++R ++ AN+++ + LP + +V + G D +A+ QI L +
Sbjct: 388 GGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRL-RANV 446
Query: 198 QVVKGA------VIPYEPKTMNAG 215
+GA V+PY P +AG
Sbjct: 447 FDREGAVSALMPVLPYVPVAPDAG 470
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 62 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 100
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 101 IQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 160
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAI 185
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+
Sbjct: 161 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAV 209
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 381 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 434
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 435 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 471
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 103
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 184 AIYQIC 189
A Y I
Sbjct: 459 AQYLIT 464
>gi|146189430|emb|CAM12243.1| poly(rC) binding protein 2 [Danio rerio]
Length = 112
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 24/122 (19%)
Query: 231 YAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
YA + ++A ++ P PLA S+ + G D
Sbjct: 1 YAGKLHQLAMQQSPFPLA-----------------------PSSQGFTAGMDASAQTGSH 37
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S + I G ++SLA+YL
Sbjct: 38 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSSDRQVTITGSPASISLAEYL 97
Query: 350 IN 351
IN
Sbjct: 98 IN 99
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L IP G +IG+ G KI +IR +SGA +++A + + S++R VT+ G+P +IS A Y
Sbjct: 38 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA-NPVEGSSDRQVTITGSPASISLAEY 96
Query: 187 QI 188
I
Sbjct: 97 LI 98
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 36/169 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT----L 87
+IG GG + +L+KE+GA I + S + YPG T L
Sbjct: 70 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 108
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+V+ + +NF+ + + + + E S PQ Q KL++P + G
Sbjct: 109 IQGTVEALNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVPNSTAGL 168
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAI 185
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ +A+
Sbjct: 169 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQNRKAV 217
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 264 TPAALAALSGS-RVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQIN 322
+P ++L G+ ++ GGK+ EI + +++ G ++GK G L+E ++++GA+I
Sbjct: 391 SPLVASSLLGTEKLAEGGKEV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQ 444
Query: 323 IHTGTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
I E + + I G A AQYLI+ I ++
Sbjct: 445 ISKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRITYEQ 484
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 111
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G+P
Sbjct: 412 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 471
Query: 184 AIYQIC 189
A Y I
Sbjct: 472 AQYLIS 477
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 101
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 102 IQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 161
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+ I + E
Sbjct: 162 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 382 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 435
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 436 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 472
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 184 AIYQIC 189
A Y I
Sbjct: 460 AQYLIT 465
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 42/193 (21%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSG 68
ED ++ L S +IG GG + +L+KE+GA I +
Sbjct: 54 FSEDGQYFLKVLIPSYA----AGSIIGKGGQTIVQLQKETGATIKL-------------- 95
Query: 69 SVDNSSTSSVETGYPGHTLWVTSVDNVCTAYN----FMCRSLEDYHINRNRMENCS---P 121
S + YPG T V + A N F+ + + N + E S P
Sbjct: 96 -------SKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQP 148
Query: 122 QPL-------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIV 172
Q Q+K+++P + G +IGKGG +K I + SGA VQ++ D + + ER+V
Sbjct: 149 QTTVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVV 207
Query: 173 TVHGNPDTISQAI 185
TV G P+ +A+
Sbjct: 208 TVSGEPEQNRKAV 220
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 392 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 445
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 446 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 482
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 410 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 469
Query: 184 AIYQIC 189
A Y I
Sbjct: 470 AQYLIT 475
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 11 EDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSV 70
ED ++ L S +IG GG + +L+KE+GA I +
Sbjct: 46 EDGQFFLKVLIPSYA----AGSIIGKGGQTIVQLQKETGATIKL---------------- 85
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQP 123
S + YPG T V + A N F+ + + N + E S PQ
Sbjct: 86 -----SKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT 140
Query: 124 L-------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTV 174
Q+K+++P + G +IGKGG +K + + SGA VQ++ D + + ER+VTV
Sbjct: 141 TVNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQ-ERVVTV 199
Query: 175 HGNPDTISQAIYQICLVLIE 194
G P+ +A+ I + E
Sbjct: 200 SGEPEQNRKAVELIVQKIQE 219
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 383 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 436
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI + ++
Sbjct: 437 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRVTYEQ 473
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 401 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 460
Query: 184 AIYQIC 189
A Y I
Sbjct: 461 AQYLIT 466
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 11/184 (5%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
D K+ E+ + ++ L H+ + + LIG G ++++ E+G KI+I+ P
Sbjct: 199 DTKLAEE--VPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNP 252
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS 120
+R +TV G++D + + +E + + V + + +H +
Sbjct: 253 ERTITVKGTIDACANAEMEIMKKLREAFENDMLAVNSHSGYFPNMYPHHHFGPFPHHHSY 312
Query: 121 PQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 313 PEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 372
Query: 181 ISQA 184
+A
Sbjct: 373 QFKA 376
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 127 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 185
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 186 ---CRMILEI 192
>gi|221058238|ref|XP_002261627.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247632|emb|CAQ41032.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 756
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 41/170 (24%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--------ACPDRIVTVSGSV 70
C+ ++V + +IG GC ++ +R +GA I D C DRI+T+SGS
Sbjct: 347 CVIRFVLDVETTAWIIGKAGCHIKEIRTITGAGAVIVDAPDNIENVKTC-DRILTLSGSA 405
Query: 71 DNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVI 130
+N A + R +E+ N N +++++
Sbjct: 406 ENK----------------------YNALKLIVRQMEEREKNINH---------PMRMLV 434
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDT 180
P LIGK G IK I D+SG+ +QVA + E++V + G+PD+
Sbjct: 435 PGKAASFLIGKKGSIIKYITDMSGSQIQVAKNK-ESENEKLVLISGSPDS 483
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 49/313 (15%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC--PDRIVTVSGSVDN 72
I R + HSS + LIG G IV +LR+E+G KI D DR++ V GS+ +
Sbjct: 39 IAFRLVCHSST----VGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMSD 94
Query: 73 SSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-YHINRNRMENCSPQPLQLKLVIP 131
G L ++ V A + R + + + + N + KL+
Sbjct: 95 RK---------GIVLGDREME-VSNAQEGVVRVFDRVWGLESEKGGNGE---VYGKLLAH 141
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
++ G+++GKGG I +IR+ SG+N++V + E ++ + G + +A+ +
Sbjct: 142 SSQVGAIVGKGGKNISNIRNNSGSNIRVCPAPHCAAKDEELILITGESLAVKKALIYVSY 201
Query: 191 VLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
L +C P ++N P I S ++ + E PH + L
Sbjct: 202 CLQDCP---------PMGKVSLNTPPTINSSDRSTSYTHEDLF----------PHLNSWL 242
Query: 251 AVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGS-- 308
+EG+ + A S + S G F ++ ++++AG VIGK GS
Sbjct: 243 P--SMEGLSINDASKQTTNANGNSSLDSKGSGHAVVF---RLLCSNNVAGSVIGKKGSIV 297
Query: 309 RLLEIRQISGAQI 321
R EIR +GA I
Sbjct: 298 RTFEIR--TGASI 308
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 67/352 (19%)
Query: 9 IDEDTLITM--RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIV 64
+D+D +F V ++ +IG G ++++ +E+ A+I I DG P+R V
Sbjct: 109 VDDDKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAV 168
Query: 65 TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMENCSPQ 122
+S + + S +VD + + + S E + R+ N P
Sbjct: 169 MISAKDEPDAPLS------------PAVDGLLRVHKRITDSSNGESGQLQRS-AGNIGP- 214
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDT 180
+L++P++ GSLIGK G IK I+D S + V++ ++ P ++ +R+V + G P
Sbjct: 215 ---TRLLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIVENVPPVALNDDRVVEIQGEPLG 271
Query: 181 ISQAIYQIC------------LVLIECTLQV----VKGAVIPYE----PKTMNAGPVILS 220
+ +A+ I L L E +++ + V P + P+T P I
Sbjct: 272 VQKAVELIASHLRKFLVDRSVLPLFETHMKMHGMPREQPVPPPQHWGPPQTWGPPPNIPP 331
Query: 221 GGQAYTLHGEYAVPVQE---------VAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAAL 271
GG + + ++ P + A +KQPH G++ G E P+ +A
Sbjct: 332 GGPGFGGNPQFIPPRPQDSYYPTPDAPAMEKQPH--YGISAYGREA------PPSGASAT 383
Query: 272 SGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINI 323
+ G V + + + A VIG AG+ + IR+ SGA + I
Sbjct: 384 GNQPLSHAGSQ-----VTHNMHIPLNYADAVIGAAGASISYIRRHSGATVTI 430
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 36/169 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT----L 87
+IG GG + +L+KE+GA I + S + YPG T L
Sbjct: 19 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 57
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+V+ + + +NF+ + + + + E S PQ Q KL++P + G
Sbjct: 58 IQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGL 117
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAI 185
+IGKGG +K + + SGA VQ++ ++ ER+VT+ G P+ +A+
Sbjct: 118 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 166
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-- 328
L+ ++ G KD EI + +++ G ++GK G L+E ++++GA+I I E
Sbjct: 348 LATEKLADGAKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI 401
Query: 329 --SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ + I G A AQYLI+ I ++
Sbjct: 402 PGTRNRKVTITGSPAATQAAQYLISQRITYEQ 433
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 60
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G+P
Sbjct: 361 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 420
Query: 184 AIYQIC 189
A Y I
Sbjct: 421 AQYLIS 426
>gi|156368623|ref|XP_001627792.1| predicted protein [Nematostella vectensis]
gi|156214712|gb|EDO35692.1| predicted protein [Nematostella vectensis]
Length = 390
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 146/362 (40%), Gaps = 81/362 (22%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT----L 87
+IG GG + ++++ +GA+I + S +N YPG L
Sbjct: 59 SIIGKGGQNIAQVQQTTGARIKL--------------SPNNQY-------YPGTQERIGL 97
Query: 88 WVTSVDNVCTAYNFMCRSLED----------YHINRNRMENCSPQPLQLKLVIPATHCGS 137
+ V+N+ +F+ + +R R + Q+K+++P + G
Sbjct: 98 IMGEVENIVQMLDFVIDKIRQEPQGIKASMSISFDRERAK-------QMKIIVPNSTAGM 150
Query: 138 LIGKGGCKIKDIRDLSGANVQVA-SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGK G IK I + +GA +Q++ D ++ ERIV V G+ + ++ A I + E
Sbjct: 151 IIGKAGSAIKSISEQTGARIQISQKDAESVAGERIVCVGGSQEQVTAACVIITSKVQEDP 210
Query: 197 LQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIE 256
+ ++ T AG + GQ +P L+GL+ LG+
Sbjct: 211 EHALNNNIMYSGLTTSRAG---HTNGQLAGSAFSSGLPF---------SALSGLSALGLT 258
Query: 257 GIGSTS----------LTPAALAALSGSRVK--------SGGKDTGDDFVETEIVLTDDI 298
+ L AAL +SGS + + + EI + D++
Sbjct: 259 NTATAQNTTTSATNHILAQAAL--MSGSNLNNPMAPPTSTATSSSIQSSATLEITVPDEL 316
Query: 299 AGCVIGKAGSRLLEIRQISGAQINIHTGTE-----SHKKMFHIQGCQEAVSLAQYLINMC 353
G ++GK G + E Q SGA+I + E S++K+ I G A LA +L+
Sbjct: 317 IGAILGKGGKTITEFMQYSGARIQVSQKGEFVPGTSNRKVV-ITGDVPAAQLAHFLVTQR 375
Query: 354 IE 355
I+
Sbjct: 376 IQ 377
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQ 183
LK+++P GS+IGKGG I ++ +GA ++++ + P + ERI + G + I Q
Sbjct: 48 LKILVPNYAAGSIIGKGGQNIAQVQQTTGARIKLSPNNQYYPGTQERIGLIMGEVENIVQ 107
Query: 184 AI 185
+
Sbjct: 108 ML 109
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + T + + + P
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAANTHSGYFSSLCPPHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIE 194
C +++E
Sbjct: 255 ---CRMILE 260
>gi|444517457|gb|ELV11574.1| Heterogeneous nuclear ribonucleoprotein K [Tupaia chinensis]
Length = 392
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 34/200 (17%)
Query: 14 LITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNS 73
++ +R L S +IG GG ++ LR + A +S+ D + P RI+++S
Sbjct: 1 MVELRILLQS----KNAGAVIGKGGENIKALRTDYKASVSVPDSSGPGRILSIS------ 50
Query: 74 STSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + + +LE+Y + +C +L+L+I +
Sbjct: 51 ----------------ADTETIGGILKKIIPTLEEYQHYKGSDLDC-----ELRLLIHQS 89
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
G +IG G KIK++ + + +++ + P T R+V + G PD + + I +I L LI
Sbjct: 90 LAGGIIGVKGAKIKELGENTRTTIKLFQERCPHPTNRVVLIGGKPDRVVECI-KIILDLI 148
Query: 194 ECTLQVVKGAVIPYEPKTMN 213
+ +KG P +PK +
Sbjct: 149 --SESPIKGRAQPCDPKFYD 166
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 311 DLGGPIITTQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 370
Query: 341 EAVSLAQYLINMCIE 355
V AQYL+ ++
Sbjct: 371 GQVQNAQYLLQNSVK 385
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 68 GSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS--PQPLQ 125
G VD + S+++T P + W Y S DY R C +
Sbjct: 268 GMVDETWDSAIDTWSP--SEWQM-------PYEPQGGSEYDYSYAGGRGSYCDLGGPIIT 318
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G + A
Sbjct: 319 TQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQGQVQNAQ 377
Query: 186 Y 186
Y
Sbjct: 378 Y 378
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 101
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 161
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+IGKGG +K + + SGA VQ++ D + + ER+VTV G P+ +A+ I + E
Sbjct: 162 IIGKGGATVKAVMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 382 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 435
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 436 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 472
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 184 AIYQIC 189
A Y I
Sbjct: 460 AQYLIT 465
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 138/340 (40%), Gaps = 96/340 (28%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + + +SGA+I ++ DRI+ VSGS++
Sbjct: 48 SVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINE-------------- 93
Query: 87 LWVTSVDNVCTAYNF-MCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ A + + L + H ++ P+ +++L++P + CG++IGKGG
Sbjct: 94 --------ILKAMELVLAKLLSELHAEEG--DDVEPRT-KVRLIVPHSSCGAIIGKGGST 142
Query: 146 IKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGA 203
IK + S A ++++ + ST+R+VT+ G TI + + L+ V K +
Sbjct: 143 IKSFIEDSQAGIKISPQDNNYMASTDRLVTLSG---TIEEQMRATDLI-------VSKLS 192
Query: 204 VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSL 263
P+ ++MN +P + ++
Sbjct: 193 EDPHYTQSMN-------------------------------YPFSYPTSF-------NAM 214
Query: 264 TPAALAALSGSRVKSGGKDT-GDDFVETE------IVLTDDIAGCVIGKAGSRLLEIRQI 316
+ +G R ++ DT + V+ E I ++D G V+G+ G +LEI Q
Sbjct: 215 NYGSNGGGTGGRFQNNKPDTRSSEIVQEERNNSLTIGVSDGHIGLVVGRGGRNILEISQA 274
Query: 317 SGAQINIH------TGTESHKKMFHIQGCQEAVSLAQYLI 350
SGA+I I +GT K I G Q A+ A+ +I
Sbjct: 275 SGARIKISDRGDFMSGTTDRK--VTITGSQRAIRAAESMI 312
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
++ ++ GS+IGKGG I D + SGA +Q++ + P +T+RI+ V G+ + I +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILK 96
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKT 211
A+ ++ L + L +G + EP+T
Sbjct: 97 AM-ELVLAKLLSELHAEEGDDV--EPRT 121
>gi|366996056|ref|XP_003677791.1| hypothetical protein NCAS_0H01320 [Naumovozyma castellii CBS 4309]
gi|342303661|emb|CCC71442.1| hypothetical protein NCAS_0H01320 [Naumovozyma castellii CBS 4309]
Length = 342
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 42/217 (19%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD--RIVT 65
++ ++ ++ MR L +IG G +R+LR ES KI + + RI+
Sbjct: 16 RLLKEEVLEMRALMLDETT----KLIIGDGSETIRQLRAESDVKIWFSKQVYGNEHRILF 71
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
V G +N + + G L + + N + + ++
Sbjct: 72 VKGLAENVAQT---FGSIARILAMATSPNAV---------------------DINAVHVE 107
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
+K + P G +IGKGG +K+I S A V+ + L ST+R+V+++G P++I A
Sbjct: 108 IKFLFPNPVVGRIIGKGGLNVKEITKASAAIVKKSYHFLEGSTDRLVSIYGVPNSIHIAT 167
Query: 186 YQICLVLIECTLQVVKGAV-----IPYEPKTMNAGPV 217
Y + E + V + IPY+P+ GPV
Sbjct: 168 YYMA----EAYFKTVAYGIDLSREIPYQPR---EGPV 197
>gi|149242857|pdb|2P2R|A Chain A, Crystal Structure Of The Third Kh Domain Of Human Poly(C)-
Binding Protein-2 In Complex With C-Rich Strand Of Human
Telomeric Dna
Length = 76
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E+ + +D+ GC+IG+ G+++ EIRQ SGAQI I E S + I G ++SLAQYL
Sbjct: 8 ELTIPNDLIGCIIGRQGAKINEIRQXSGAQIKIANPVEGSTDRQVTITGSAASISLAQYL 67
Query: 350 INM 352
IN+
Sbjct: 68 INV 70
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
+L IP G +IG+ G KI +IR SGA +++A + + ST+R VT+ G+ +IS A Y
Sbjct: 8 ELTIPNDLIGCIIGRQGAKINEIRQXSGAQIKIA-NPVEGSTDRQVTITGSAASISLAQY 66
Query: 187 QICLVL 192
I + L
Sbjct: 67 LINVRL 72
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSST 75
+F + ++ +IG G ++++ +ES A+I I DG P+R V +S + +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPATH 134
S ++D + Y + + D + N P +L++PA+
Sbjct: 167 IS------------PAMDGLFRVYKRITDGSDGDSGQPERNISNVGP----TRLLVPASQ 210
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP---MSTERIVTVHGNPDTISQAIYQIC 189
GSLIGK G IK I+D S + V++ + LP ++ +R+V + G P + +A+ I
Sbjct: 211 AGSLIGKQGATIKSIQDSSKSIVRIV-ETLPLVALNDDRVVEIQGEPVGVQKALESIA 267
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 36/169 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT----L 87
+IG GG + +L+KE+GA I + S + YPG T L
Sbjct: 78 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 116
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+V+ + + +NF+ + + + + E S PQ Q KL++P + G
Sbjct: 117 IQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGL 176
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAI 185
+IGKGG +K + + SGA VQ++ ++ ER+VT+ G P+ +A+
Sbjct: 177 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 225
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 271 LSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-- 328
L+ ++ G KD EI + +++ G ++GK G L+E ++++GA+I I E
Sbjct: 407 LATEKLADGAKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFI 460
Query: 329 --SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
+ + I G A AQYLI+ I ++
Sbjct: 461 PGTRNRKVTITGSPAATQAAQYLISQRITYEQ 492
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 119
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G+P
Sbjct: 420 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQA 479
Query: 184 AIYQIC 189
A Y I
Sbjct: 480 AQYLIS 485
>gi|380012793|ref|XP_003690459.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Apis
florea]
Length = 443
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
+ +++++ + G +IGKGG KIK++R+ +GA +++ S P ST+R++++ G P T +
Sbjct: 120 IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICGKPTTCIE 179
Query: 184 AIYQICLVLIECTLQVVKGAVIPYEPKTMN 213
I ++ + L KG PY+P +
Sbjct: 180 CIRELIATIKTSPL---KGVNNPYDPHNFD 206
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTG-TESHKKMFHIQGCQEAVSLAQY 348
T++ + D+AG +IGK G+R+ ++R SGA I I + S+ ++ I G + +AQY
Sbjct: 371 TQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMAQY 430
Query: 349 LINMCIE 355
L+ +
Sbjct: 431 LLQQSVH 437
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP G++IGKGG +I+ +R SGA + + + L S +RI+T+ G P I A Y
Sbjct: 372 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-DEPLSGSNDRIITITGLPSQIQMAQY 430
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSG 68
I +R L H S + C+IG GG ++ LR+++GA+I I CP DR++++ G
Sbjct: 120 IDVRMLVHQS----QAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISICG 172
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 47/95 (49%)
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGC 339
G G D ++ +++ AGC+IGK G ++ E+R+ +GA+I I++ H I C
Sbjct: 112 GSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSHCCPHSTDRLISIC 171
Query: 340 QEAVSLAQYLINMCIELQKNNTTNTSDNPEPADLD 374
+ + + + + ++ + ++ +P + D
Sbjct: 172 GKPTTCIECIRELIATIKTSPLKGVNNPYDPHNFD 206
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 150/363 (41%), Gaps = 36/363 (9%)
Query: 19 CLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTS 76
C+F V V ++ +IG G +++++ +E+ ++I + D PDRIV VSG D +
Sbjct: 53 CVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAAL 112
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCG 136
S ++D V + + E N+ + ++L++ +T
Sbjct: 113 S------------PAMDAVVRIFKRVSGFSETDAENQESAAGLAFS--SIRLLVASTQAI 158
Query: 137 SLIGKGGCKIKDIRDLSGANVQVAS----DMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+LIGK G IK I++ + A+V+V S + ERIV + G + +A+ + L
Sbjct: 159 NLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHL 218
Query: 193 IECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL-- 250
+ +V +V+P KT NA QA T + + PL+
Sbjct: 219 RKF---LVDHSVLPLFEKTYNAP--TSQDRQAETWSDKSLLHTSSRTSIFADIPLSTKRD 273
Query: 251 AVLGIEGIGSTSLTPAALAALSG-----SRVKSGGKDTGDDFVETEIVLTDDI----AGC 301
+VL P++ +L G S V S + T ++ T I A
Sbjct: 274 SVLADRESQLDLFLPSSTMSLYGQDSSLSGVHSSALGRVGAPIVTTVIQTMQIPLSYAED 333
Query: 302 VIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKNNT 361
+IG G+ + IR+ SGA + + + + I+G V AQ LI I K
Sbjct: 334 IIGIQGTNIEYIRRTSGAILTVQESRVPDEIVVEIKGTSSEVQTAQQLIQDVISSHKEPV 393
Query: 362 TNT 364
T++
Sbjct: 394 TSS 396
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 34/181 (18%)
Query: 28 NEISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDNSSTSSVETGYPGH 85
+++ +IG GG IV+ ++K++G +I + D DRI+++SG P H
Sbjct: 397 DKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISG--------------PAH 442
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQ---PLQLKLVIPATHCGSLIGKG 142
D + A N + H+ R M S + P +L++ A G ++GKG
Sbjct: 443 P-----SDGISPAQNAI------LHVQRKIMLPTSDKKEGPAICRLIVSANQVGCVLGKG 491
Query: 143 GCKIKDIRDLSGANVQVAS-DMLPMST---ERIVTVHGNPDTISQAIYQICLVLIECTLQ 198
G I ++R LSGA + V S D +P + +V + G+ + I +A+ QI L +
Sbjct: 492 GSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFR 551
Query: 199 V 199
V
Sbjct: 552 V 552
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 128/346 (36%), Gaps = 76/346 (21%)
Query: 123 PLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLP---MSTERIVTVHGNPD 179
P+ L+L++ + G L+GKGG IK + +G ++V D LP + +++ + G D
Sbjct: 243 PVSLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVLRDNLPSCALLNDKLCQITGEID 302
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVA 239
++ + + + +L+ + + + + S G + + +P+Q +
Sbjct: 303 SVRKGLNAVSELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPLQGPS 362
Query: 240 GKKQPH-------PLAGLAVLGIEGIGSTSLTP----AALAALSGSRVKSGGKDTG---- 284
P P+ G A + IE + L P ++ G+ VK+ KDTG
Sbjct: 363 QANGPFDIIDLQPPIHGHASVPIESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIK 422
Query: 285 --DDFVETE---------------------------------------------IVLTDD 297
D ++E ++++ +
Sbjct: 423 VLDTVPKSEDRIISISGPAHPSDGISPAQNAILHVQRKIMLPTSDKKEGPAICRLIVSAN 482
Query: 298 IAGCVIGKAGSRLLEIRQISGAQI------NIHTGTESHKKMFHIQGCQEAVSLA----- 346
GCV+GK GS + E+R++SGA I I G H ++ I G EA+ A
Sbjct: 483 QVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQIT 542
Query: 347 QYLINMCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLIEK 392
L N + + + P LD+ F + SL K
Sbjct: 543 ARLRNHLFRVDRMPAMGPNMRPPFGLLDSQFGPFAGNHESPSLFHK 588
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 168/424 (39%), Gaps = 106/424 (25%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVT 65
++E+ + + C F ++ LIG GG I+R L+ E+GA I I D A PD R+V
Sbjct: 420 LEEEVVFKLLCHFE------KVGSLIGKGGSIIRXLQSETGASIKIAD-AAPDSDERVVV 472
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQP-- 123
+S + T+ + P D V + CR E +P
Sbjct: 473 ISAREACTLTNXEQKHSPAQ-------DAVIRVH---CRIAE-----------IGFEPGA 511
Query: 124 -LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLPM---STERIVTVHGNP 178
+ +L++ + G L+GKGG I ++R +GA++++ A + +P + +V V G+
Sbjct: 512 AVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSL 571
Query: 179 DTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNA-GPVILSG------GQAYTLH--- 228
++ A++ C ++ + P +P N GP +S H
Sbjct: 572 QSVQDALF--------CITSRIRETIFPLKPSISNVNGPPYMSSFPEIPPPMFRPRHDPA 623
Query: 229 --GEYAVPVQEVAGKKQP----HPLAGLAVL--GIEGIGSTSL----------------- 263
G Y+ PV G + HPL + G++ IG ++L
Sbjct: 624 SPGHYSSPVGVPHGIDRSAVPGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPP 683
Query: 264 -----------TPAALAA-LSGSRVKSGG-------KDTGDD-----FVETEIVLTDDIA 299
TP ++ L G+ V SGG +G E+ + +
Sbjct: 684 FDRPSSSPRMWTPQGVSGNLRGTDVGSGGLASRSGPPGSGSQAPNITXTTVEVAVPQALL 743
Query: 300 GCVIGKAGSRLLEIRQISGAQINIH-TGTESHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
V G+ S L +IRQISGA++ I T S + + + G + AQ L+ I ++
Sbjct: 744 SHVYGENNSNLNQIRQISGARVVIQDPRTGSSEGVVVVSGTPDQTRAAQSLVQAFILSEQ 803
Query: 359 NNTT 362
TT
Sbjct: 804 MTTT 807
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 69/171 (40%), Gaps = 23/171 (13%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIV----------- 64
+ LF + +IG GG I+R+ R+++GAKI I D C +R++
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKR 114
Query: 65 ---TVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED-YHINRNRMENCS 120
+ G+ N S D A + R E ++ R E
Sbjct: 115 EASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEK 174
Query: 121 PQPLQ-----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-ASDMLP 165
+ L +L+ P+ G ++G+GG ++ IR SGA ++V D +P
Sbjct: 175 KEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIP 225
>gi|324500292|gb|ADY40143.1| Far upstream element-binding protein 1 [Ascaris suum]
gi|324519726|gb|ADY47462.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 363
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 70/155 (45%), Gaps = 33/155 (21%)
Query: 33 LIGPGGCIVRRLRKESGAKISIT---DGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWV 89
+IG GG ++RL ESGAKI D PDR + G+ + + + T ++
Sbjct: 2 IIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKA---------TQFI 52
Query: 90 TSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDI 149
+ + N A E ++++ +PA G +IGKGG IK I
Sbjct: 53 SELVNKSGA----GSGAEIFYMH-----------------VPANKTGLVIGKGGETIKQI 91
Query: 150 RDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
SGA+V+++ D P S+E++ + G P I A
Sbjct: 92 CAESGAHVELSRDPPPNSSEKVFIIKGTPYQIHHA 126
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 56/264 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 18 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 56
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 57 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 116
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 117 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED- 175
Query: 197 LQVVKGAVIPYEPKTMN------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
P +N AGPV S YA P + A
Sbjct: 176 ---------PQSSSCLNISYANVAGPVANSN----PTGSPYASPADVLPAAAAASAAAAS 222
Query: 251 AVLGIEGIGSTSLTPAALAALSGS 274
+LG G+ PAAL A SG+
Sbjct: 223 GLLGPAGLAGVGAFPAALPAFSGT 246
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 65
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + LP + R VT+ G+P
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 440
Query: 184 AIYQIC 189
A Y I
Sbjct: 441 AQYLIS 446
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLA 346
EI + +++ G ++GK G L+E ++++GA+I I E + + I G A A
Sbjct: 382 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 441
Query: 347 QYLINMCIELQK 358
QYLI+ + ++
Sbjct: 442 QYLISQRVTYEQ 453
>gi|324500869|gb|ADY40396.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 581
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 33/164 (20%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT---DGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG GG ++RL ESGAKI D PDR + G+ + + + T
Sbjct: 237 VGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKA---------T 287
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+++ + N A E ++++ +PA G +IGKGG I
Sbjct: 288 QFISELVNKSGA----GSGAEIFYMH-----------------VPANKTGLVIGKGGETI 326
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
K I SGA+V+++ D P S+E++ + G P I A + I +
Sbjct: 327 KQICAESGAHVELSRDPPPNSSEKVFIIKGTPYQIHHAQHIIRI 370
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 153/375 (40%), Gaps = 60/375 (16%)
Query: 14 LITMRCLFHSSVNVNE--ISCLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGS 69
L+ R + V + + +IG GG + R++ ESG KI I P+R ++G+
Sbjct: 72 LVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGT 131
Query: 70 VDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLV 129
+ S+E L VD CR+ +H N ++ S +L+
Sbjct: 132 PE-----SIEQA---KRLLGQIVDR--------CRNGPGFH---NDVDGSS---TIQELL 169
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGAN-VQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
IPA+ G +IGKGG IK +++ +G V + LP ++ + + G+P + QA +
Sbjct: 170 IPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV 229
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILS-----GGQAYTLHGEYAVPVQEVAGKK- 242
++ E +G + + M G + +S G +GE +Q AG +
Sbjct: 230 LEIIREKDQADFRGVRGDFSSR-MGGGSLEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRI 288
Query: 243 QPHPLAGLA------VLGIEG--------IGSTSLTPAALAALSGSRVKSGGKDTGDDFV 288
Q P G++ V+G I LT G V G D+
Sbjct: 289 QFKPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWS 348
Query: 289 --------ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT----GTESHKKMFHI 336
E + D G VIGK G + I Q SGA + + T+ + ++F I
Sbjct: 349 VGTPGGVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFTI 408
Query: 337 QGCQEAVSLAQYLIN 351
+G + + +A++LI+
Sbjct: 409 RGIPQQIEVARHLID 423
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 148/343 (43%), Gaps = 53/343 (15%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPDR---IVTVSG--SVDNSSTSSVETGYP 83
+I +IG GG ++ +RKESGA+I + D DR I+T++ + D++ +++VE
Sbjct: 132 KIGLVIGKGGVTIKSIRKESGARIDVDDSKN-DREESIITITSNEATDDAKSAAVEA--- 187
Query: 84 GHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGG 143
L + S N +D N +M L+L++P G LIGKGG
Sbjct: 188 --VLLLQSKIN------------DD---NEGKM--------NLRLLVPGKVIGCLIGKGG 222
Query: 144 CKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQAIYQICLVLIECTLQVV 200
+ D+R + A + ++ P S++ +V V G + + A+ QI L L + L+
Sbjct: 223 SIVNDMRSKTKAAIYISKGEKPRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLR-- 280
Query: 201 KGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLA----GLAVLGIE 256
+ + + + + Y Y +P + ++Q PL G G+E
Sbjct: 281 --DSVDRQNSEKDGKLTVATTDPLYA--SSYPLPAL-LPYRQQITPLGYDHRGDIERGLE 335
Query: 257 GIGSTSLT-PAALAALSG--SRVKS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLE 312
+SL ++L A+ S V S K G E+ + V+GK G+ L
Sbjct: 336 VYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDN 395
Query: 313 IRQISGAQIN-IHTGTESHKKMFHIQGCQEAVSLAQYLINMCI 354
I +ISGA I I + + H + I G E A+ LI I
Sbjct: 396 IIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFI 438
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNP---DT 180
L L+++ PA G +IGKGG IK IR SGA + V D E I+T+ N D
Sbjct: 122 LVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDV-DDSKNDREESIITITSNEATDDA 180
Query: 181 ISQAIYQICLV 191
S A+ + L+
Sbjct: 181 KSAAVEAVLLL 191
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 36/169 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHT----L 87
+IG GG + +L+KE+GA I + S + YPG T L
Sbjct: 70 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 108
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+V+ + +NF+ + + + + E S PQ Q KL++P + G
Sbjct: 109 IQGTVEALNGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGL 168
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAI 185
+IGKGG +K + + SGA VQ++ ++ ER+VT+ G P+ +A+
Sbjct: 169 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKAV 217
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLA 346
EI + +++ G ++GK G L+E ++++GA+I I E + + I G Q A A
Sbjct: 414 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAA 473
Query: 347 QYLINMCIELQK 358
QYLI+ I ++
Sbjct: 474 QYLISQRITYEQ 485
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 111
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G SQ
Sbjct: 413 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITG-----SQ 467
Query: 184 AIYQICLVLIECTLQVVKG 202
A Q LI + +G
Sbjct: 468 AATQAAQYLISQRITYEQG 486
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 56/264 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 46 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 84
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 144
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 145 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED- 203
Query: 197 LQVVKGAVIPYEPKTMN------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
P +N AGPV S YA P + A
Sbjct: 204 ---------PQSSSCLNISYANVAGPVANSN----PTGSPYASPADVLPAAAAASAAAAS 250
Query: 251 AVLGIEGIGSTSLTPAALAALSGS 274
+LG G+ PAAL A SG+
Sbjct: 251 GLLGPAGLAGVGAFPAALPAFSGT 274
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 93
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + LP + R VT+ G+P
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 184 AIYQIC 189
A Y I
Sbjct: 469 AQYLIS 474
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLA 346
EI + +++ G ++GK G L+E ++++GA+I I E + + I G A A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 347 QYLINMCIELQK 358
QYLI+ + ++
Sbjct: 470 QYLISQRVTYEQ 481
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 56/264 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 41 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 79
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 80 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 139
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 140 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED- 198
Query: 197 LQVVKGAVIPYEPKTMN------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
P +N AGPV S YA P + A
Sbjct: 199 ---------PQSSSCLNISYANVAGPVANSN----PTGSPYASPADVLPAAAAASAAAAS 245
Query: 251 AVLGIEGIGSTSLTPAALAALSGS 274
+LG G+ PAAL A SG+
Sbjct: 246 GLLGPAGLAGVGAFPAALPAFSGT 269
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 30 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 88
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + LP + R VT+ G+P
Sbjct: 404 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 463
Query: 184 AIYQIC 189
A Y I
Sbjct: 464 AQYLIS 469
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLA 346
EI + +++ G ++GK G L+E ++++GA+I I E + + I G A A
Sbjct: 405 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 464
Query: 347 QYLINMCIELQK 358
QYLI+ + ++
Sbjct: 465 QYLISQRVTYEQ 476
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 143/361 (39%), Gaps = 62/361 (17%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSSTSSVETGY 82
V ++ +IG G ++++ +E+ A+I I DG +R V VS + S+
Sbjct: 3 VPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSS------- 55
Query: 83 PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKG 142
++D + + + L+ N + +L++PA+ GSLIGK
Sbjct: 56 -----LPPAMDGLLRVHKRIIDGLDSDSSNTPPTSGAK---VSTRLLVPASQAGSLIGKQ 107
Query: 143 GCKIKDIRDLSGANVQV--ASDM--LPMSTERIVTVHGNPDTISQAIYQIC--------- 189
G +K I++ S V+V A D+ + +R+V V G + +A+ I
Sbjct: 108 GGTVKSIQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVD 167
Query: 190 ---LVLIECTLQVVKGAVIPYEPKTMNAGPVILS----GGQAYTLHGEYAVPVQEVAG-- 240
+ L E +Q+ ++ P P L GG Y + +Y P +++
Sbjct: 168 RSIIPLFEMQMQMSNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQNPQYMPPPRQLDNYY 227
Query: 241 ---------KKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
+KQPH G++ G E A + + + S ++ + +
Sbjct: 228 PPADMPPLMEKQPH--QGISAYGRE---------APMGSHASSNAQAAPSMITQITQQMQ 276
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKM-FHIQGCQEAVSLAQYLI 350
I L+ A VIG AG+ + IR+ SGA + I M I G V AQ LI
Sbjct: 277 IPLS--YADAVIGTAGASISYIRRASGATVTIQETRGVPGAMTVEISGTASQVQTAQQLI 334
Query: 351 N 351
Sbjct: 335 Q 335
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 18 RCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVTVSGSVDNSST 75
+F V ++ +IG G ++++ +ES A+I + DG PDR V +S + +
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 76 SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME-NCSPQPLQLKLVIPATH 134
+VD + + + L+ R P +L++PA+
Sbjct: 174 ------------LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGP----TRLLVPASQ 217
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLP--MSTERIVTVHGNPDTISQAIYQICLVL 192
GSLIGK G IK I+D S +++ + P +S +R+V + G P + +A+ I L
Sbjct: 218 AGSLIGKQGATIKSIQDASKCVLRILESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 277
>gi|299116281|emb|CBN76089.1| poly(rc) binding protien (Partial) [Ectocarpus siliculosus]
Length = 334
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 39/147 (26%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITD------GACPDRIVTVSGSVDNSSTSSVE--- 79
+I +IG GG I++ +R+ SGAK++I+D G DR+VT +G+ ++ +
Sbjct: 111 KIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQLAFTHILS 170
Query: 80 -TGYPGH----TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATH 134
G G + + D C A +F +L+IP
Sbjct: 171 HAGAVGPDADPVMGLAGGDPDCVANSF-------------------------RLLIPNVK 205
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVAS 161
G LIG+GGC IK IR+ SGA ++++S
Sbjct: 206 AGGLIGRGGCTIKAIREQSGARIEISS 232
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPM---STERIVTVHGNPDTISQ 183
+++IP G++IGKGG IK IR++SGA V ++ + S +R+VT G +++
Sbjct: 104 RVLIPNCKIGAVIGKGGAIIKHIREVSGAKVTISDSCTGLHGDSDDRMVTAAGTFNSVQL 163
Query: 184 AIYQI 188
A I
Sbjct: 164 AFTHI 168
>gi|198429828|ref|XP_002122756.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 53
[Ciona intestinalis]
Length = 525
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 72/163 (44%), Gaps = 34/163 (20%)
Query: 3 GNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISI--TDGACP 60
G D D+ T IT V+ + +IG GG ++R L ++SGA+I + D +
Sbjct: 54 GGSDNLFDDATTIT--------VDSRDCGKIIGKGGSVIRELEQKSGARIKVCQRDRSET 105
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR-MENC 119
D V +SGS D + A + M L + ++NR + E
Sbjct: 106 DVPVVISGSQDARN-----------------------AAHEMINDLMNLNLNRRQPRERD 142
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD 162
+ +K+ I CG LIG+GG I DIRD S N++V D
Sbjct: 143 TGSNEMIKIAIRKNDCGKLIGRGGSTINDIRDKSNTNIKVCQD 185
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDG-----ACPDRIVTVSGSVDNSS-------TSSVE 79
+IG GG +R ++S A I+++ PDR+V ++G+ D T VE
Sbjct: 139 AIIGKGGATIRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKLVE 198
Query: 80 TGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLI 139
+ P +T + TS + M + Y M+ Q +++ + +P G++I
Sbjct: 199 S--PNYTRFTTSNVSYGPPPQHMGYQQKGY------MQPQQQQRMEVTVPVPEARVGAII 250
Query: 140 GKGGCKIKDIRDLSGANVQVA--SDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
GKGG I ++ + G ++++ D +P + R VT+ G D + QI VLI
Sbjct: 251 GKGGEVISQLKSVIGVKIRISDRDDFVPGTRNRKVTISGAADAV-----QIAQVLI 301
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 33/171 (19%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGA-----CPDRIVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG + L+ +SGA++ ++ + +R++ SGSV+
Sbjct: 55 SIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSVNQ-------------- 100
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
V TA + + ++ M + QL+L++P CG++IGKGG I
Sbjct: 101 --------VLTALHLILTKIQ----GEQSMMARDGKSTQLRLLVPTPLCGAIIGKGGATI 148
Query: 147 KDIRDLSGANVQVA-SDMLPMST-ERIVTVHGNPDTISQAIYQICLVLIEC 195
+ + S A + V+ D P+ +R+V + G D + +A+ + L+E
Sbjct: 149 RSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRAVALLLTKLVES 199
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTISQA 184
K ++ GS+IGKGG I +++ SGA +Q+ AS+ P + ER++ G+ + + A
Sbjct: 45 KFLMSNAAAGSIIGKGGANISELQSQSGARLQLSRASEFFPGTQERVMLASGSVNQVLTA 104
Query: 185 IYQIC 189
++ I
Sbjct: 105 LHLIL 109
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,975,555,912
Number of Sequences: 23463169
Number of extensions: 299444826
Number of successful extensions: 807688
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1368
Number of HSP's successfully gapped in prelim test: 1081
Number of HSP's that attempted gapping in prelim test: 788843
Number of HSP's gapped (non-prelim): 13964
length of query: 433
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 288
effective length of database: 8,957,035,862
effective search space: 2579626328256
effective search space used: 2579626328256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)