BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11929
(433 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 143/363 (39%), Positives = 201/363 (55%), Gaps = 49/363 (13%)
Query: 3 GNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGAC 59
G + K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G C
Sbjct: 31 GKMESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNC 86
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIVT++G D + A+ + E+ IN M N
Sbjct: 87 PERIVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNS 122
Query: 120 ---SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHG 176
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G
Sbjct: 123 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISG 182
Query: 177 NPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP-- 234
PD I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 183 TPDAIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHP 238
Query: 235 -----VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVE 289
+ ++A ++ P P G G + L G +S G D
Sbjct: 239 DQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPAST 295
Query: 290 TEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQY 348
E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQY
Sbjct: 296 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQY 355
Query: 349 LIN 351
LIN
Sbjct: 356 LIN 358
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/360 (39%), Positives = 200/360 (55%), Gaps = 49/360 (13%)
Query: 6 DGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDR 62
+ K+ E L +T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+R
Sbjct: 34 ESKVSEGGLNVTLTIRLLMHG----KEVGSIIGKKGETVKKMREESGARINISEGNCPER 89
Query: 63 IVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC--- 119
IVT++G D + A+ + E+ IN M N
Sbjct: 90 IVTITGPTDA----------------------IFKAFAMIAYKFEEDIINS--MSNSPAT 125
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
S P+ L+LV+PA+ CGSLIGKGG KIK+IR+ +GA VQVA DMLP STER VT+ G PD
Sbjct: 126 SKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 185
Query: 180 TISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEYAVP----- 234
I Q + QIC+V++E KGA IPY PK + PVI +GGQAYT+ G+YA+P
Sbjct: 186 AIIQCVKQICVVMLESP---PKGATIPYRPKPAST-PVIFAGGQAYTIQGQYAIPHPDQL 241
Query: 235 --VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEI 292
+ ++A ++ P P G G + L G +S G D E+
Sbjct: 242 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMG---QSSGLDASPPASTHEL 298
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLIN 351
+ +D+ GC+IG+ G+++ EIRQ+SGAQI I TE S ++ I G +SLAQYLIN
Sbjct: 299 TIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 209/394 (53%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDGGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQY 205
Query: 232 -AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
AV EV +Q L+ AV + S+ P G D G
Sbjct: 206 GAVTPAEVTKLQQ---LSSHAV----PFATPSVVP--------------GLDPGTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + PADL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPSS-APADLPAPFSPPLTA 337
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 207 bits (527), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 144/394 (36%), Positives = 207/394 (52%), Gaps = 68/394 (17%)
Query: 1 MDGNGDGKIDEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG 57
M G+ G +E L +T+R L H E+ +IG G V+R+R++S A+I+I++G
Sbjct: 1 MSGSDAGLEEEPELSITLTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEG 56
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
+CP+RI T++GS TA F S+ + ++ +
Sbjct: 57 SCPERITTITGS---------------------------TAAVFHAVSMIAFKLDEDLCA 89
Query: 118 ------NCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
N S P+ L+LVIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER
Sbjct: 90 APANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERA 149
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
VTV G PD I + QIC V++E KGA IPY P +++ G V+LS Q +++ G+Y
Sbjct: 150 VTVSGVPDAIILCVRQICAVILESP---PKGATIPYHP-SLSLGTVLLSTNQGFSVQGQY 205
Query: 232 A-VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVET 290
V EV +Q L+G AV S S+ P G D
Sbjct: 206 GTVTPAEVTKLQQ---LSGHAV----PFASPSMVP--------------GLDPSTQTSSQ 244
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYL 349
E ++ +D+ GCVIG+ GS++ EIRQ+SGA I I E + ++ I G +++LAQYL
Sbjct: 245 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYL 304
Query: 350 INMCIELQKNNTTNTSDNPEPADLDAAISAFMTA 383
I C+E K+ + T + P DL A S +TA
Sbjct: 305 ITACLETAKSTSGGTPGS-APTDLPAPFSPPLTA 337
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 206 bits (523), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 139/377 (36%), Positives = 201/377 (53%), Gaps = 65/377 (17%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R++S A+I+I++G+CP+RI T++GS
Sbjct: 18 LTLRMLMHG----KEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGS----- 68
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME------NCSPQPLQLKL 128
TA F S+ + ++ + + S P+ L+L
Sbjct: 69 ----------------------TAAVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRL 106
Query: 129 VIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQI 188
VIPA+ CGSLIGK G KIK+IR+ +GA VQVA D+LP STER VTV G PD I + QI
Sbjct: 107 VIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQI 166
Query: 189 CLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY-AVPVQEVAGKKQPHPL 247
C V++E KGA IPY P +++ G V+LS Q +++ G+Y AV EV +Q L
Sbjct: 167 CAVILESP---PKGATIPYHP-SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQ---L 219
Query: 248 AGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAG 307
+G AV S S+ P G D E ++ +D+ GCVIG+ G
Sbjct: 220 SGHAV----PFASPSVVP--------------GMDPSTQTSSQEFLVPNDLIGCVIGRQG 261
Query: 308 SRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQEAVSLAQYLINMCIELQKNNTTNTSD 366
S++ EIRQ+SGA I I E + ++ I G +++LAQYLI C+E K+ + T
Sbjct: 262 SKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETAKSTSGGTPG 321
Query: 367 NPEPADLDAAISAFMTA 383
+ PADL S +TA
Sbjct: 322 S-APADLPTPFSPPLTA 337
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/379 (35%), Positives = 196/379 (51%), Gaps = 80/379 (21%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQV-VKGAVIPYEPKTMNAGPVILSGGQ----------------------------- 223
E Q KG IPY PK ++ PVI +GGQ
Sbjct: 168 ETLSQSPPKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPP 226
Query: 224 --AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSR 275
AYT+ G+YA+P + ++A ++ P+ G GI S+S
Sbjct: 227 LEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSS-----------PE 274
Query: 276 VKS-GGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKM 333
VK G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 275 VKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQ 334
Query: 334 FHIQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 335 VTITGSAASISLAQYLINV 353
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 199 bits (506), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/377 (34%), Positives = 194/377 (51%), Gaps = 79/377 (20%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+++R+ESGA+I+I++G CP+RI+T++G
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAG------ 63
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL-EDYHINRNRMENCSPQPLQLKLVIPAT 133
+ + A+ + L ED + S P+ L+LV+PA+
Sbjct: 64 ----------------PTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P +I + + QIC+V++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVML 167
Query: 194 ECTLQVVKGAVIPYEPKTMNAGPVILSGGQ------------------------------ 223
E KG IPY PK ++ PVI +GGQ
Sbjct: 168 ESP---PKGVTIPYRPKP-SSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPL 223
Query: 224 -AYTLHGEYAVP------VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV 276
AYT+ G+YA+P + ++A ++ P+ G GI S+S A
Sbjct: 224 EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTH-GNTGFSGIESSSPEVKGYWA------ 276
Query: 277 KSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFH 335
G D E+ + +D+ GC+IG+ G+++ EIRQ+SGAQI I E S +
Sbjct: 277 ---GLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 333
Query: 336 IQGCQEAVSLAQYLINM 352
I G ++SLAQYLIN+
Sbjct: 334 ITGSAASISLAQYLINV 350
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 192 bits (488), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 132/377 (35%), Positives = 200/377 (53%), Gaps = 72/377 (19%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSS 74
+T+R L H E+ +IG G V+R+R+ESGA+I+I++G CP+RI+T++G +
Sbjct: 14 LTIRLLMHG----KEVGSIIGKKGESVKRIREESGARINISEGNCPERIITLTGPTNA-- 67
Query: 75 TSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLE-DYHINRNRMENCSPQPLQLKLVIPAT 133
+ A+ + LE D + + S P+ L+LV+PAT
Sbjct: 68 --------------------IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAT 107
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLI 193
CGSLIGKGGCKIK+IR+ +GA VQVA DMLP STER +T+ G P ++++ + QICLV++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVML 167
Query: 194 ECTLQVVKGAV--IPYEPKTMNAGPVILSGGQ----------------------AYTLHG 229
E Q +G V IPY+P ++ PVI +GGQ AY++ G
Sbjct: 168 ETLSQSPQGRVMTIPYQPMPASS-PVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQG 226
Query: 230 EYAVPVQEVA-----GKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTG 284
++ + ++A ++Q H G GI S+S VK G +
Sbjct: 227 QHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSS-----------PEVK-GYWASL 274
Query: 285 DDFVET--EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQE 341
D +T E+ + +++ GC+IG+ G+ + EIRQ+SGAQI I E S + I G
Sbjct: 275 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAA 334
Query: 342 AVSLAQYLINMCIELQK 358
++SLAQYLIN + +K
Sbjct: 335 SISLAQYLINARLSSEK 351
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 157/358 (43%), Gaps = 54/358 (15%)
Query: 9 IDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVT 65
+D+ T T + + ++ E +IG G V LR + K +T A P DR++T
Sbjct: 84 MDDATYATQQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTK-AVPNVHDRVLT 142
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ 125
+SG ++N V AY F+ N + + + P +
Sbjct: 143 ISGPLEN----------------------VVRAYRFIIDIFAKNSTNPDGTPSDANTPRK 180
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L+I + GS+IG+ G +IK I+D + + DMLP STER V +HG D + AI
Sbjct: 181 LRLLIAHSLMGSIIGRNGLRIKLIQDKCSCRMIASKDMLPQSTERTVEIHGTVDNLHAAI 240
Query: 186 YQICLVLIECTLQVVKGA-VIPYEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQP 244
++I LI+ +GA + Y P + P+ A Q+V+ P
Sbjct: 241 WEIGKCLID---DWERGAGTVFYNPVSRLTQPLPSLASTASP---------QQVSPPAAP 288
Query: 245 HPLAGLAVL-GIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVI 303
+G A+ G+ + L +V I + D+ GC+I
Sbjct: 289 STTSGEAIPENFVSYGAQVFPATQMPFLQQPKVTQN------------ISIPADMVGCII 336
Query: 304 GKAGSRLLEIRQISGAQINI--HTGTESHKKMFHIQGCQEAVSLAQYLINMCIELQKN 359
G+ GS++ EIR+ SG++I+I E+ ++MF I G E A +L+ +E++K+
Sbjct: 337 GRGGSKISEIRRTSGSKISIAKEPHDETGERMFTITGTHEENEKALFLLYQQLEMEKD 394
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Query: 293 VLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES-HKKMFHIQGCQEAVSLAQYLIN 351
+L+ AG +IGKAG + E+R + + + + H ++ I G E V A I
Sbjct: 99 LLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLENVVRAYRFI- 157
Query: 352 MCIELQKNNTTNTSDNPEPADLDAAISAFMTASVNSSLI 390
I++ N+TN P A+ + + S+ S+I
Sbjct: 158 --IDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSII 194
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 101 bits (251), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 171/390 (43%), Gaps = 56/390 (14%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--AC 59
D + + D + M CL V S ++G G + R++ E+ A+I+I++
Sbjct: 56 DHDSPDNVPSDVHLRMLCL------VKHASLIVGHKGATISRIKSETSARINISNNIRGV 109
Query: 60 PDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC 119
P+RIV V G+ D+ V AY + R+L + H N + E+
Sbjct: 110 PERIVYVRGTCDD----------------------VAKAYGMIVRALLEEHGNEDNGEDI 147
Query: 120 SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPD 179
+ + L+IP G +IGK G ++++I DLS A + + + L +S +RI+T++G PD
Sbjct: 148 E---ISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLLLSNDRILTINGVPD 204
Query: 180 TISQAIYQICLVLIECTLQVVKGAV---IPYEPKTMNAGPVILSGGQAYTL----HGEYA 232
I A + I L+ ++ + V I Y+P N+ V++ Q T+ + +Y
Sbjct: 205 AIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNS--VLIDHSQPNTIFHQRNHQYH 262
Query: 233 VPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRV-------------KSG 279
+ ++ K + +L + T+ + A A + V +
Sbjct: 263 PSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAP 322
Query: 280 GKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQG 338
G +FV+ EI + + G VIGK G + +++ +G I I E S ++ I+G
Sbjct: 323 GNHLLMNFVQQEIFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSERRLTIRG 382
Query: 339 CQEAVSLAQYLINMCIELQKNNTTNTSDNP 368
A A LI+ IE+ ++N +P
Sbjct: 383 TFMASQAAIMLISNKIEIDRSNAERKRRSP 412
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 160/381 (41%), Gaps = 58/381 (15%)
Query: 8 KIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDG--ACPDRIVT 65
KI+ D L+ R L ++ + +IG G ++ +R + AKI + D C R++T
Sbjct: 29 KINRDELVVYRIL----CPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVIT 84
Query: 66 VSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLED----YHINRNRMENCSP 121
+ SV T L D + Y+ + S E+ +++R+ + C
Sbjct: 85 IYCSVKEKQEEIGFTKSENEPLCCAQ-DALLKVYDAIVASDEENNTKTNVDRDDNKEC-- 141
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASD-------MLPMSTERIVTV 174
+L++P + SLIGK G IK IR + A+V+V S + M + +V +
Sbjct: 142 -----RLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVI 196
Query: 175 HGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMN--AGPVILS---GGQAYTLHG 229
G P+++ QA++ + ++ ++ IP + + + A VI+ Y G
Sbjct: 197 SGEPESVKQALFAVSAIM----YKINPRENIPLDSTSQDVPAASVIVPSDLSNSVYPQTG 252
Query: 230 EYAVP---VQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKS-GGKDTGD 285
Y+ +Q+ AG P L+V +G T+ P + A S GG +
Sbjct: 253 FYSNQDHILQQGAG--VPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSE 310
Query: 286 DFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH---------------TGTESH 330
+ V + +I VIGK GS + IR+ SG+ I ++ T TES
Sbjct: 311 ELVFKVLCPLCNIMR-VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESP 369
Query: 331 KKMFHIQGCQEAVSLAQYLIN 351
M + EAV L Q IN
Sbjct: 370 DDMKSM--AVEAVLLLQEYIN 388
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 136/330 (41%), Gaps = 60/330 (18%)
Query: 33 LIGPGGCIVRRLRKESGAKISITDG--ACPDR----IVTVSGSVDNSSTSSVETGYPGHT 86
+IG GG ++R+R+ SG+ I + D C D IVT + S D+ + +VE
Sbjct: 326 VIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA-----V 380
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
L L++Y IN EN ++++L++ + G +IGK G I
Sbjct: 381 LL-----------------LQEY-INDEDAEN-----VKMQLLVSSKVIGCVIGKSGSVI 417
Query: 147 KDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIP 206
+IR + AN+ ++ + +V V G ++ A+ QI L L E L K +V
Sbjct: 418 NEIRKRTNANICISKG----KKDDLVEVSGEVSSVRDALIQIVLRLREDVLGD-KDSVAT 472
Query: 207 YEPKTMNAGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGLA-VLGIEGIGSTSLTP 265
+P LSG AG P ++ +A G G GS P
Sbjct: 473 RKPPARTDNCSFLSGSSN--------------AGYTLPSFMSSMASTSGFHGYGSF---P 515
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
A L + S G+ +E I++ V+GK G L IR+ISGA I I
Sbjct: 516 AGDNVLGSTGPYSYGRLPSSSALE--ILIPAHAMSKVMGKGGGNLENIRRISGAMIEISA 573
Query: 326 GTESH-KKMFHIQGCQEAVSLAQYLINMCI 354
SH + + G E + A+ L+ +
Sbjct: 574 SKTSHGDHIALLSGTLEQMRCAENLVQAFV 603
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 55/196 (28%)
Query: 10 DEDTL-ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSG 68
DED + M+ L S V I C+IG G ++ +RK + A I I+ G D +V VSG
Sbjct: 389 DEDAENVKMQLLVSSKV----IGCVIGKSGSVINEIRKRTNANICISKGK-KDDLVEVSG 443
Query: 69 SVDN-----------------SSTSSVETGYP----------------GHTL--WVTSVD 93
V + SV T P G+TL +++S+
Sbjct: 444 EVSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNCSFLSGSSNAGYTLPSFMSSMA 503
Query: 94 NVCTAYNFMCRSLED--------YHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCK 145
+ + + D Y R P L+++IPA ++GKGG
Sbjct: 504 STSGFHGYGSFPAGDNVLGSTGPYSYGR------LPSSSALEILIPAHAMSKVMGKGGGN 557
Query: 146 IKDIRDLSGANVQVAS 161
+++IR +SGA +++++
Sbjct: 558 LENIRRISGAMIEISA 573
Score = 38.5 bits (88), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTESHKKMFHIQGCQE 341
D + V+ +++++ + GCVIGK+GS + EIR+ + A I I G KK ++ E
Sbjct: 389 DEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKG----KKDDLVEVSGE 444
Query: 342 AVSLAQYLINMCIELQKN---NTTNTSDNPEPADLDAAISAFMTASVNS 387
S+ LI + + L+++ + + + PA D +F++ S N+
Sbjct: 445 VSSVRDALIQIVLRLREDVLGDKDSVATRKPPARTDNC--SFLSGSSNA 491
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVD 71
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 37 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSIS---- 88
Query: 72 NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIP 131
+ + + +LE+Y + +C +L+L+I
Sbjct: 89 ------------------ADTETIGEILKKIIPTLEEYQHYKGSDFDC-----ELRLLIH 125
Query: 132 ATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLV 191
+ G +IG G KIK++R+ + +++ + P ST+R+V + G PD + + I +I L
Sbjct: 126 QSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI-KIILD 184
Query: 192 LIECTLQVVKGAVIPYEP 209
LI + +KG PY+P
Sbjct: 185 LI--SESPIKGRAQPYDP 200
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 346 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 405
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 406 DQIQNAQYLLQNSVK 420
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 413
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 33 LIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 366 IIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 407
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 8/113 (7%)
Query: 81 GYPGHTLWVTSVDNVC-----TAYNFMCRSLEDYHI--NRNRMENCSPQPLQLKLVIPAT 133
G+ W +++D AY S DY R + + ++ IP
Sbjct: 338 GFSADETWDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKD 397
Query: 134 HCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 398 LAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.8 bits (125), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 30/208 (14%)
Query: 12 DTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVS---- 67
D ++ +R L S +IG GG ++ LR + A +S+ D + P+RI+++S
Sbjct: 40 DEMVELRILLQS----KNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISADIE 95
Query: 68 --GSVDNSSTSSVETGY----PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
G + ++E G P T + + N+ D+ +C
Sbjct: 96 TIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDF--------DC-- 145
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+L+L+I + G +IG G KIK++R+ + +++ + P ST+R+V + G PD +
Sbjct: 146 ---ELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRV 202
Query: 182 SQAIYQICLVLIECTLQVVKGAVIPYEP 209
+ I +I L LI + +KG PY+P
Sbjct: 203 VECI-KIILDLI--SESPIKGRAQPYDP 227
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 282 DTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE-SHKKMFHIQGCQ 340
D G + T++ + D+AG +IGK G R+ +IR SGA I I E S ++ I G Q
Sbjct: 382 DLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ 441
Query: 341 EAVSLAQYLINMCIE 355
+ + AQYL+ ++
Sbjct: 442 DQIQNAQYLLQNSVK 456
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIY 186
++ IP GS+IGKGG +IK IR SGA++++ + L S +RI+T+ G D I A Y
Sbjct: 391 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-DEPLEGSEDRIITITGTQDQIQNAQY 449
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITD--GACPDRIVTVSGSVDN 72
+IG GG ++++R ESGA I I + DRI+T++G+ D
Sbjct: 401 SIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 443
>sp|Q6CNI6|HEK2_KLULA Heterogeneous nuclear rnp K-like protein 2 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=HEK2 PE=3 SV=1
Length = 383
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 14/206 (6%)
Query: 21 FHSSVNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSV 78
FH V++ E + +IGP G + +R+E+ KI I+ + +C DR++ VSG + S
Sbjct: 61 FHVLVSLKEAAKIIGPQGNTIETIRRENDIKIGISPREKSCSDRLLNVSGPPRQVANSL- 119
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ----LKLVIPATH 134
G L V + D + F ++ +E+ P+ + L+L+
Sbjct: 120 -----GQVLRVLTTDYEPEEHVFKHLRFMLPPASKEEIED--PEKWKQIGNLRLICTNPQ 172
Query: 135 CGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
S+IG+ G KIK + + + + LP S +R++ + G P +++ I +I + I+
Sbjct: 173 ISSVIGQQGAKIKKLIETHTVKLVASKHFLPDSKDRVLEIQGFPTSVANCINEIAELFIQ 232
Query: 195 CTLQVVKGAVIPYEPKTMNAGPVILS 220
+ V + Y P + + + +S
Sbjct: 233 DDVHVPPRTLPRYYPHSKHTKEIQVS 258
Score = 36.6 bits (83), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 69/174 (39%), Gaps = 34/174 (19%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGH 85
+IS +IG G +++L + K+ + PD R++ + G +P
Sbjct: 172 QISSVIGQQGAKIKKLIETHTVKLVASKHFLPDSKDRVLEIQG-------------FP-- 216
Query: 86 TLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK-------LVIPATHCGSL 138
TSV N C +D H+ + P K L IP G+L
Sbjct: 217 ----TSVAN-CINEIAELFIQDDVHVPPRTLPRYYPHSKHTKEIQVSQTLAIPKEFVGAL 271
Query: 139 IGKGGCKIKDIRDLSGANVQVASDMLPMST-ERIVTVHGNPDTISQAIYQICLV 191
+G GG +I ++R + + + D P +RI TV GN D S + Q L+
Sbjct: 272 LGVGGNRIANLRKFTKTKIVIGQD--PTENGDRIFTVWGN-DQKSVKLAQTMLL 322
>sp|Q756R8|HEK2_ASHGO Heterogeneous nuclear rnp K-like protein 2 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=HEK2 PE=3 SV=1
Length = 316
Score = 62.0 bits (149), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 30/184 (16%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHT 86
E + ++G GG + +RK +G KI I+ + +C DR++ V+GS+D + S
Sbjct: 43 EAARILGRGGNTIDNIRKANGVKIGISTKEKSCSDRLLEVTGSIDAVANS---------- 92
Query: 87 LWVTSVDNVCTAYNFMCRSLE---DYHINRNRMENCSP-------QPLQ------LKLVI 130
+ V V TA + E + HI ++ P P++ L+L++
Sbjct: 93 --LADVVKVLTADDTNEEDAEPEPEQHIFKHLNFILPPPSPDEAEDPMKVKQIGNLRLIV 150
Query: 131 PATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICL 190
+ S+IG G KIK + D + + V+ LP S +RI+ + G P++I+ I I
Sbjct: 151 TNSQVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQGFPNSIANCIKDISQ 210
Query: 191 VLIE 194
LI+
Sbjct: 211 TLIK 214
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 67/153 (43%), Gaps = 21/153 (13%)
Query: 29 EISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGH 85
++S +IG G +++L +K+ ++ PD RI+ + G NS + ++
Sbjct: 154 QVSSIIGTAGSKIKKLIDTHSSKLVVSKTFLPDSQDRILEIQG-FPNSIANCIKD--ISQ 210
Query: 86 TLWVTSV-DNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGC 144
TL V D Y + +D H+ + IPA + G+L+G GG
Sbjct: 211 TLIKDDVLDTKEKRYYPHSKHSKDIHVTAT-------------VAIPAEYVGALLGHGGN 257
Query: 145 KIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+I ++R + + VA + + ER T+ GN
Sbjct: 258 RIANLRKYTRTKITVAQEP-NQNNEREFTITGN 289
>sp|P38199|HEK2_YEAST Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HEK2 PE=1
SV=1
Length = 381
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>sp|A6ZKR5|HEK2_YEAS7 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain YJM789) GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANAVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>sp|B3LNH0|HEK2_YEAS1 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>sp|C8Z3W4|HEK2_YEAS8 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain Lalvin EC1118 / Prise de mousse)
GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>sp|C7GND0|HEK2_YEAS2 Heterogeneous nuclear rnp K-like protein 2 OS=Saccharomyces
cerevisiae (strain JAY291) GN=HEK2 PE=3 SV=1
Length = 381
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 87/181 (48%), Gaps = 16/181 (8%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSSTS------ 76
+++ E + +IG G + R+R + KI I++ C DRI++ +G+V N + +
Sbjct: 50 LSLKEAAKIIGTKGSTISRIRAANSVKIGISEKVPGCSDRILSCAGNVINVANAIGDIVD 109
Query: 77 SVETGYPGHTLWVTSVDNVCTAYNFMCRSL----EDYHINRNRMENCSPQPLQLKLVIPA 132
+ P + ++F+ L +D + ++E+ ++L++
Sbjct: 110 VLNKRNPENEDAAEGEAEEHYYFHFLNHILPAPSKDEIRDLQQLEDIG----YVRLIVAN 165
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+H S+IGK G IK + + G + + D LP S ERI+ + G P +I+ + +I ++
Sbjct: 166 SHISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQGFPGSITNVLIEISEII 225
Query: 193 I 193
+
Sbjct: 226 L 226
Score = 40.0 bits (92), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACP---DRIVTVSGSVDNSSTSSVETGYPGH- 85
IS +IG G ++ L + G KI + P +RI+ + G +PG
Sbjct: 168 ISSIIGKAGATIKSLINKHGVKIVASKDFLPASDERIIEIQG-------------FPGSI 214
Query: 86 -TLWVTSVDNVCTAYNFMCRSLEDY--HINRNRMENCSPQP---LQLKLVIPATHCGSLI 139
+ + + + + + + Y H+ ++ E SP +++L IP + G++I
Sbjct: 215 TNVLIEISEIILSDVDVRFSTERSYFPHLKKSSGEPTSPSTSSNTRIELKIPELYVGAII 274
Query: 140 GKGGCKIKDIRDLSGANVQV 159
G+G +IK+++ + N+ V
Sbjct: 275 GRGMNRIKNLKTFTKTNIVV 294
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSP 121
R +TV G+V+ +++ +E + + V T + + + P
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYP 382
Query: 122 QPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTI 181
+ + L IP G++IGK G IK + +GA++++A P +ER+V + G P+
Sbjct: 383 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 442
Query: 182 SQA 184
+A
Sbjct: 443 FKA 445
Score = 40.4 bits (93), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 29/146 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG G +++L + +GA I I PD R+V ++G + +
Sbjct: 396 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ--------- 446
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ NF N E L+ + +P++ G +IGKGG +
Sbjct: 447 ---GRIFGKLKEENFF-----------NPKEEVK---LEAHIRVPSSTAGRVIGKGGKTV 489
Query: 147 KDIRDLSGANVQVASDMLPMSTERIV 172
++++L+ A V V D P E ++
Sbjct: 490 NELQNLTSAEVIVPRDQTPDENEEVI 515
Score = 40.0 bits (92), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>sp|C5E0I9|HEK2_ZYGRC Heterogeneous nuclear rnp K-like protein 2 OS=Zygosaccharomyces
rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC
568 / NRRL Y-229) GN=HEK2 PE=3 SV=1
Length = 372
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 163/380 (42%), Gaps = 74/380 (19%)
Query: 2 DGNGDGKIDEDTLITMRCLFHSSV-NVNEISCLIGPGGCIVRRLRKESGAKISITDG--A 58
+ +G ++ IT+ + H + ++ E + +IG G ++ +R+ + KI +++
Sbjct: 42 ESKDEGNVELRESITLPTINHRVLLSLKESAKVIGTKGSTIQNVREINHVKIGLSEKQLG 101
Query: 59 CPDRIVTVSGSVDNSSTSS---VETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNR 115
C DR+++ +G + N + S V G T V+S + A++F+ L R+
Sbjct: 102 CSDRVLSCAGRIINVAHSLGQIVSVLKEGST--VSSAEKY--AFHFLNPILPPP--TRDE 155
Query: 116 MENCSPQPLQL----KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
++ + + +L++ + S+IGKGG +IK +++ + + D LP S ERI
Sbjct: 156 FQDLTLDEINKIGTSRLMVTNSQLSSIIGKGGARIKSLKERHRVKIVASRDFLPDSDERI 215
Query: 172 VTVHGNPDTISQAIYQICLVLIECTLQVVKGAVIPYEPKTMNAGPVILSGGQAYTLHGEY 231
+ + G P+ I+ + QI +L +N + + + Y
Sbjct: 216 LEIQGLPNAITNVLLQISKIL-------------------LNELDITFASERRY------ 250
Query: 232 AVPVQEVAGKKQPHPLAGLAVLGIEGIGSTSLTPAALAALSGSRVKSGGKDTGDDFVETE 291
PH + S+S + A A S S V++G + ++ +
Sbjct: 251 -----------YPH------------LRSSSPSNAVSLAASTSGVQTGASNYLNNEFKAT 287
Query: 292 IVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTES-------HKKMFHIQGCQ-EAV 343
+ + + G + G+ G+R+ +R+ + +I + + + F I G + V
Sbjct: 288 LKIPESYVGAIAGRRGNRIANLRKFTKTKIIVEKKIDKTVIDVDPDNRTFIILGDHFKNV 347
Query: 344 SLAQYLI--NMCIELQKNNT 361
LA+ ++ N+ +E++K +
Sbjct: 348 KLAESMLLKNLDVEIEKRKS 367
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 38/179 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 101
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 102 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 161
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+ I + E
Sbjct: 162 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAVELIIQKIQE 219
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 382 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 435
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 436 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 472
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 459
Query: 184 AIYQIC 189
A Y I
Sbjct: 460 AQYLIT 465
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 77/170 (45%), Gaps = 38/170 (22%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 62 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 100
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
+ A N F+ + + N + E S PQ Q+K+++P + G
Sbjct: 101 IQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGL 160
Query: 138 LIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQAI 185
+IGKGG +K I + SGA VQ++ D + + ER+VTV G P+ +A+
Sbjct: 161 IIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERVVTVSGEPEQNRKAV 209
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 381 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 434
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 435 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 471
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 103
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 458
Query: 184 AIYQIC 189
A Y I
Sbjct: 459 AQYLIT 464
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 104/264 (39%), Gaps = 56/264 (21%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 46 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 84
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQPL-------QLKLVIPATHCGS 137
V A N F+ + + + E + PQ Q KL++P + G
Sbjct: 85 VQGTAEALNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGL 144
Query: 138 LIGKGGCKIKDIRDLSGANVQVASDMLPMS-TERIVTVHGNPDTISQAIYQICLVLIECT 196
+IGKGG +K + + SGA VQ++ ++ ER+VTV G P+ + +A+ I + E
Sbjct: 145 IIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQED- 203
Query: 197 LQVVKGAVIPYEPKTMN------AGPVILSGGQAYTLHGEYAVPVQEVAGKKQPHPLAGL 250
P +N AGPV S YA P + A
Sbjct: 204 ---------PQSSSCLNISYANVAGPVANSN----PTGSPYASPADVLPAAAAASAAAAS 250
Query: 251 AVLGIEGIGSTSLTPAALAALSGS 274
+LG G+ PAAL A SG+
Sbjct: 251 GLLGPAGLAGVGAFPAALPAFSGT 274
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHGNPDTIS 182
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ V G + ++
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALN 93
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + LP + R VT+ G+P
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQA 468
Query: 184 AIYQIC 189
A Y I
Sbjct: 469 AQYLIS 474
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 291 EIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHTGTE----SHKKMFHIQGCQEAVSLA 346
EI + +++ G ++GK G L+E ++++GA+I I E + + I G A A
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAA 469
Query: 347 QYLINMCIELQK 358
QYLI+ + ++
Sbjct: 470 QYLISQRVTYEQ 481
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 25/180 (13%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGY 82
V++ E + +IG G ++++R+ S KI I+ + C DRI++ SGS + +
Sbjct: 16 VSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGSAQGVANAI----- 70
Query: 83 PGHTLWVTSVDNV------CTAYNFMCRSLEDYHINRNRMENCSPQPLQ----LKLVIPA 132
G + V + D+ NF+ + I P+ ++ L+L++
Sbjct: 71 -GDVVEVLNQDDSEPETHSYKPLNFILPAPSATEIQ-------DPESVKRIGNLRLIVSN 122
Query: 133 THCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQICLVL 192
+ S+IG G +IK + + G V + + LP S +R+V + G P I+ + I +L
Sbjct: 123 SQVSSIIGTQGSRIKSLIEKHGVKVVASKNFLPDSQDRVVEIQGFPGAIASCLVDISEIL 182
Score = 38.9 bits (89), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 67/157 (42%), Gaps = 22/157 (14%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETG 81
V+ +++S +IG G ++ L ++ G K+ + PD R+V + G
Sbjct: 120 VSNSQVSSIIGTQGSRIKSLIEKHGVKVVASKNFLPDSQDRVVEIQG------------- 166
Query: 82 YPGHTLW-VTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIG 140
+PG + + + A + Y +++ E + + IP + G+L+G
Sbjct: 167 FPGAIASCLVDISEILAAEPKPSHEKQYYPHTKSQEEGS----VTKDVAIPVEYVGALLG 222
Query: 141 KGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGN 177
+GG ++ +R + V + SD R+ T+ GN
Sbjct: 223 RGGNRVSSLRKYTKTKV-IVSDEPDEENNRVFTITGN 258
>sp|Q6FUD8|HEK2_CANGA Heterogeneous nuclear rnp K-like protein 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HEK2 PE=3 SV=1
Length = 349
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 25 VNVNEISCLIGPGGCIVRRLR-KESGAKISITDGA--CPDRIVTVSGSVD---------- 71
+++ E + +IG G ++ +R + KI I++ C DR++T SG V+
Sbjct: 9 LSLKEAAKVIGTQGNSIQSVRDNNNNVKIGISEKVPGCSDRVLTCSGEVEDVCSALGDVV 68
Query: 72 ---NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQ--- 125
N + + E H ++ + V T + E E + LQ
Sbjct: 69 TLLNKPSENEEETDNHHFYFLNHLLPVPTLDDLKATDPEAS-------EEALHEQLQNIG 121
Query: 126 -LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
L+L++ + S+IGKGG +IK + + G + + LP STER++ + G P I Q
Sbjct: 122 YLRLLVFNSQLSSIIGKGGNQIKSLIEKHGVKLVASRAFLPDSTERMLEIQGVPSAIKQV 181
Query: 185 IYQIC 189
+ IC
Sbjct: 182 LLDIC 186
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 83/203 (40%), Gaps = 59/203 (29%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL------------------SKLSKSKDFYPGTTERVCL 104
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQ---------------------- 122
+ A N F+ + + N + E S PQ
Sbjct: 105 IQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 164
Query: 123 ---PL------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERI 171
P+ Q+K+++P + G +IGKGG +K + + SGA VQ++ D + + ER+
Sbjct: 165 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQ-ERV 223
Query: 172 VTVHGNPDTISQAIYQICLVLIE 194
VTV G P+ +A+ I + E
Sbjct: 224 VTVSGEPEQNRKAVELIIQKIQE 246
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 409 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 462
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 463 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 499
Score = 42.0 bits (97), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 486
Query: 184 AIYQIC 189
A Y I
Sbjct: 487 AQYLIT 492
Score = 41.6 bits (96), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV-----ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQG 107
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 62/203 (30%)
Query: 32 CLIGPGGCIVRRLRKESGAKISITDGACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTS 91
+IG GG + +L+KE+GA I + S + YPG T V
Sbjct: 63 SIIGKGGQTIVQLQKETGATIKL---------------------SKSKDFYPGTTERVCL 101
Query: 92 VDNVCTAYN----FMCRSLEDYHINRNRMENCS---PQ---------------------- 122
+ A N F+ + + N + E S PQ
Sbjct: 102 IQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSS 161
Query: 123 ---PL------QLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERI 171
P+ Q+K+++P + G +IGKGG +K I + SGA VQ++ D + + ER+
Sbjct: 162 PSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQ-ERV 220
Query: 172 VTVHGNPDTISQAIYQICLVLIE 194
VTV G P+ +A+ I + E
Sbjct: 221 VTVSGEPEQNRKAVELIIQKIQE 243
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Query: 266 AALAALSGSRVKSGGKDTGDDFVETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIHT 325
AA A L + G KD EI + +++ G ++GK G L+E ++++GA+I I
Sbjct: 406 AASAILGTEKSTDGSKDV------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISK 459
Query: 326 GTE----SHKKMFHIQGCQEAVSLAQYLINMCIELQK 358
E + + I G A AQYLI I ++
Sbjct: 460 KGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQ 496
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQV--ASDMLPMSTERIVTVHG 176
LK++IP+ GS+IGKGG I ++ +GA +++ + D P +TER+ + G
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQG 104
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVAS--DMLPMSTERIVTVHGNPDTISQ 183
+++ +P G+++GKGG + + ++L+GA +Q++ + +P + R VT+ G P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQA 483
Query: 184 AIYQIC 189
A Y I
Sbjct: 484 AQYLIT 489
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 89/226 (39%), Gaps = 55/226 (24%)
Query: 10 DEDTL---ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPD 61
DE L I ++ L H+ + + LIG G ++++ E+G KI+I+ P+
Sbjct: 267 DETKLAEEIPLKILAHNGL----VGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPE 322
Query: 62 RIVTVSGSVDNSSTSSVE------TGYPGHTLWVTSVDNVCTAYNF-------------- 101
R +TV G+V+ +++ +E + L V N+ N
Sbjct: 323 RTITVKGTVEACASAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVLS 382
Query: 102 ----------------------MCRSLEDYH-INRNRMENCSPQPLQLKLVIPATHCGSL 138
SL +H + P+ + L IP G++
Sbjct: 383 PPAGPRGAPPAAPYHPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAI 442
Query: 139 IGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQA 184
IGK G IK + +GA++++A P +ER+V + G P+ +A
Sbjct: 443 IGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Score = 40.8 bits (94), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 29/146 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG G +++L + +GA I I PD R+V ++G + + G
Sbjct: 439 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ------GRI 492
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+N N E L+ + +P++ G +IGKGG +
Sbjct: 493 FGKLKEENFF-----------------NPKEEVK---LEAHIRVPSSTAGRVIGKGGKTV 532
Query: 147 KDIRDLSGANVQVASDMLPMSTERIV 172
++++L+ A V V D P E ++
Sbjct: 533 NELQNLTSAEVIVPRDQTPDENEEVI 558
Score = 40.0 bits (92), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G IK+I + + V + + E+ VT+H P+ S+A
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTSEA- 254
Query: 186 YQICLVLIEC 195
C +++E
Sbjct: 255 ---CRMILEI 261
>sp|A7TT46|HEK2_VANPO Heterogeneous nuclear rnp K-like protein 2 OS=Vanderwaltozyma
polyspora (strain ATCC 22028 / DSM 70294) GN=HEK2 PE=3
SV=1
Length = 336
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/185 (19%), Positives = 84/185 (45%), Gaps = 17/185 (9%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISITDGA--CPDRIVTVSGSVDNSST------- 75
+++ E + +IG G ++++R ++ KI I++ C DRI+ +GS+++ S
Sbjct: 24 LSLKEAAKIIGTKGTKIQKVRDDNNVKIGISERKERCSDRILICTGSIEDVSNAIGDICE 83
Query: 76 --------SSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLK 127
++ E S+++ Y F+ L ++ + + ++
Sbjct: 84 ILLSEDVVTNDEDSNEKENDEYNSIEDEKFVYPFLNFRLAKPTLDEVNDAETLKKIINIR 143
Query: 128 LVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAIYQ 187
+++ C ++IG G +IK + + G + ++ LP S ER++ + G I++ +
Sbjct: 144 VLVTRAQCSAIIGTKGDRIKSLIENRGVRMIASNQTLPDSDERLLEIQGTSMAITKVLED 203
Query: 188 ICLVL 192
I V+
Sbjct: 204 INAVI 208
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 127 KLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVA-SDMLPMSTERIVTVHGNPDTISQAI 185
+L++ +IG G KI+ +RD NV++ S+ ++RI+ G+ + +S AI
Sbjct: 21 RLLLSLKEAAKIIGTKGTKIQKVRD--DNNVKIGISERKERCSDRILICTGSIEDVSNAI 78
Query: 186 YQICLVLI 193
IC +L+
Sbjct: 79 GDICEILL 86
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
D K E+ I ++ L H+ N + LIG G ++++ +++ KI+I+ P
Sbjct: 270 DIKFTEE--IPLKILAHN----NFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNP 323
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINR------- 113
+R +TV G+V+ + + E S +N + N + ++N
Sbjct: 324 ERTITVKGNVETCAKAEEEI----MKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPT 379
Query: 114 -----------NRMENCSPQPLQ-----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANV 157
+ M PQ Q + L IPA G++IGK G IK + +GA++
Sbjct: 380 SGMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASI 439
Query: 158 QVASDMLPMSTERIVTVHGNPDTISQA 184
++A P + R+V + G P+ +A
Sbjct: 440 KIAPAEAPDAKVRMVIITGPPEAQFKA 466
Score = 38.9 bits (89), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 59/146 (40%), Gaps = 29/146 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG G +++L + +GA I I PD R+V ++G + +
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQ--------- 467
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ NF+ E L+ + +P+ G +IGKGG +
Sbjct: 468 ---GRIYGKIKEENFVSPKEEVK--------------LEAHIRVPSFAAGRVIGKGGKTV 510
Query: 147 KDIRDLSGANVQVASDMLPMSTERIV 172
++++LS A V V D P +++V
Sbjct: 511 NELQNLSSAEVVVPRDQTPDENDQVV 536
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+L++P G++IGK G I++I + + + V + E+ +T+ P+ S
Sbjct: 196 LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEGTSA 255
Query: 184 AIYQICLVL 192
A I ++
Sbjct: 256 ACKSILEIM 264
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 75/192 (39%), Gaps = 26/192 (13%)
Query: 10 DEDTLITMRCLFHSSVNVNE----------ISCLIGPGGCIVRRLRKESGAKISIT--DG 57
D+ +R + S + NE + +IG G ++++++ ++G +I DG
Sbjct: 252 DQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDG 311
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
PDRI ++G D ++ + + +V
Sbjct: 312 TTPDRIAQITGPPDRCQHAA--------EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNW 363
Query: 118 NCSPQP---LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE--RIV 172
N P P + ++P G +IGKGG IK I SGA +++ + P + ++
Sbjct: 364 NMGP-PGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLF 422
Query: 173 TVHGNPDTISQA 184
T+ G P I A
Sbjct: 423 TIRGTPQQIDYA 434
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG + R+++ESG KI I G P+R ++G+ ++
Sbjct: 107 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPES--------------- 151
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
V S + R +H P +++IPA+ G +IGKGG IK
Sbjct: 152 -VQSAKRLLDQIVEKGRPAPGFH------HGDGPGNAVQEIMIPASKAGLVIGKGGETIK 204
Query: 148 DIRDLSGANVQVASDMLPMST--ERIVTVHGNPDTISQAIYQICLVLI 193
+++ +G + + D P +T ++ + + G+P + QA ++ L LI
Sbjct: 205 QLQERAGVKMVMIQDG-PQNTGADKPLRITGDPYKVQQA-KEMVLELI 250
Score = 34.3 bits (77), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH----TGTESHKKMFHIQGCQEAVS 344
E ++ G +IGK G + I Q SGA+I + + + K+F I+G + +
Sbjct: 373 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQID 432
Query: 345 LAQYLINMCI 354
A+ LI I
Sbjct: 433 YARQLIEEKI 442
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM--LPMSTERIVTVHGNPDTISQA 184
+P G +IG+GG +I I+ SG +Q+A D LP ER + G P+++ A
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSA 155
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 38/207 (18%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
D K E+ I ++ L H+ N + LIG G ++++ +++ KI+I+ P
Sbjct: 270 DIKFTEE--IPLKILAHN----NFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNP 323
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHIN-------- 112
+R +TV GSV+ + + E S +N + N + ++N
Sbjct: 324 ERTITVKGSVETCAKAEEEI----MKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPT 379
Query: 113 ----------RNRMENCSPQPLQ-----LKLVIPATHCGSLIGKGGCKIKDIRDLSGANV 157
+ + PQ Q + L IPA G++IGK G IK + +GA++
Sbjct: 380 SGMPPPTSGPPSTLTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASI 439
Query: 158 QVASDMLPMSTERIVTVHGNPDTISQA 184
++A P + R+V + G P+ +A
Sbjct: 440 KIAPAEAPDAKVRMVIITGPPEAQFKA 466
Score = 38.1 bits (87), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 29/146 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG G +++L + +GA I I PD R+V ++G + +
Sbjct: 417 VGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFKAQ--------- 467
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ NF+ E L+ + +P+ G +IGKGG +
Sbjct: 468 ---GRIYGKIKEENFVSPKEEVK--------------LEAHIRVPSFAAGRVIGKGGKTV 510
Query: 147 KDIRDLSGANVQVASDMLPMSTERIV 172
+++ LS A V V D P +++V
Sbjct: 511 NELQSLSSAEVVVPRDQTPDENDQVV 536
Score = 33.9 bits (76), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%)
Query: 124 LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQ 183
L L+L++P G++IGK G I++I + + + V + E+ +T+ P+ S
Sbjct: 196 LPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEGTSA 255
Query: 184 AIYQICLVL 192
A I ++
Sbjct: 256 ACKSILEIM 264
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG + +++++SG K+ I+ G P+R V+++G+ ++ + +
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKM--------- 207
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+D++ + +H N N +N + Q +++IPA G +IGKGG IK
Sbjct: 208 ---MLDDIVS--RGRGGPPGQFHDNANGGQNGTVQ----EIMIPAGKAGLVIGKGGETIK 258
Query: 148 DIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+++ +G + + D + ++ + + G+P + QA + +L E
Sbjct: 259 QLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGY 82
V + + +IG G ++++++ ++G +I DG P++I + G D ++
Sbjct: 330 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARII-- 387
Query: 83 PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKG 142
+ S+ + N P ++ IP CG +IG+G
Sbjct: 388 ---NDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 143 GCKIKDIRDLSGANVQVASDMLPMSTE--RIVTVHGNPDTISQA 184
G +K I +GA V+++ + P ++ + G+P I A
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM--LPMSTERIVTVHGNPDTISQA 184
+P G +IG+GG +I I+ SG VQ++ D LP ER V++ G P+++ +A
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 205
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 10 DEDTLITMRCLFHSSVNVNE----------ISCLIGPGGCIVRRLRKESGAKISIT--DG 57
D+ +R + S + NE + +IG G ++++++ ++G +I DG
Sbjct: 253 DQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDG 312
Query: 58 ACPDRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRME 117
PDRI ++G D ++ T + SV M
Sbjct: 313 TTPDRIAQITGPPDRCQHAAEII-----TDLLRSVQAGNPGGPGPGGRGRGRGQGNWNM- 366
Query: 118 NCSPQPLQ-LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTE--RIVTV 174
P LQ ++P G +IGKGG IK I SGA +++ P + ++ T+
Sbjct: 367 -GPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTI 425
Query: 175 HGNPDTISQA 184
G P I A
Sbjct: 426 RGTPQQIDYA 435
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG + R+++ESG KI I G P+R ++G+ ++
Sbjct: 108 VGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPES--------------- 152
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
V S + R +H P +++IPA+ G +IGKGG IK
Sbjct: 153 -VQSAKRLLDQIVEKGRPAPGFH------HGDGPGNAVQEIMIPASKAGLVIGKGGETIK 205
Query: 148 DIRDLSGANVQVASDMLPMST--ERIVTVHGNPDTISQAIYQICLVLI 193
+++ +G + + D P +T ++ + + G+P + QA ++ L LI
Sbjct: 206 QLQERAGVKMVMIQDG-PQNTGADKPLRITGDPYKVQQA-KEMVLELI 251
Score = 34.3 bits (77), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 289 ETEIVLTDDIAGCVIGKAGSRLLEIRQISGAQINIH----TGTESHKKMFHIQGCQEAVS 344
E ++ G +IGK G + I Q SGA+I + + + K+F I+G + +
Sbjct: 374 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQID 433
Query: 345 LAQYLINMCI 354
A+ LI I
Sbjct: 434 YARQLIEEKI 443
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM--LPMSTERIVTVHGNPDTISQA 184
+P G +IG+GG +I I+ SG +Q+A D LP ER + G P+++ A
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP---ERSCMLTGTPESVQSA 156
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 41/210 (19%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
D K E+ I ++ L H+ N + LIG G ++++ +++ KI+I+ P
Sbjct: 271 DTKFTEE--IPLKILAHN----NFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNP 324
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHIN-------- 112
+R +TV GS++ + + E S +N A N + ++N
Sbjct: 325 ERTITVKGSIETCAKAEEEI----MKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPS 380
Query: 113 ------------------RNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSG 154
P+ + L IPA G++IGK G IK + +G
Sbjct: 381 SSGIPPPAVSVASAAAAASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAG 440
Query: 155 ANVQVASDMLPMSTERIVTVHGNPDTISQA 184
A++++A P + R+V + G P+ +A
Sbjct: 441 ASIKIAPAEGPDAKLRMVIITGPPEAQFKA 470
Score = 36.6 bits (83), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 29/146 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG G +++L + +GA I I PD R+V ++G + +
Sbjct: 421 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFKAQ--------- 471
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ NF E L+ + +P+ G +IGKGG +
Sbjct: 472 ---GRIYGKLKEENFFGPKEEVK--------------LEAHIKVPSYAAGRVIGKGGKTV 514
Query: 147 KDIRDLSGANVQVASDMLPMSTERIV 172
++++L+ A V V D P +++V
Sbjct: 515 NELQNLTSAEVVVPRDQTPDENDQVV 540
Score = 36.6 bits (83), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L++++P G++IGK G I++I + + + + + E+ +T+H P+ S A
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSTA- 257
Query: 186 YQICLVLIE 194
C +++E
Sbjct: 258 ---CKIIME 263
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 87/210 (41%), Gaps = 41/210 (19%)
Query: 6 DGKIDEDTLITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CP 60
D K E+ I ++ L H+ N + LIG G ++++ +++ KI+I+ P
Sbjct: 279 DTKFTEE--IPLKILAHN----NFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNP 332
Query: 61 DRIVTVSGSVDNSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENC- 119
+R +TV GS++ + + E S +N A N + ++N +
Sbjct: 333 ERTITVKGSIETCAKAEEEV----MKKIRESYENDIAAMNLQAHLIPGLNLNALGLFPPS 388
Query: 120 -------------------------SPQPLQLKLVIPATHCGSLIGKGGCKIKDIRDLSG 154
P+ + L IPA G++IGK G IK + +G
Sbjct: 389 SSGMPPPSAGVSSPTTSASYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAG 448
Query: 155 ANVQVASDMLPMSTERIVTVHGNPDTISQA 184
A++++A P + R+V + G P+ +A
Sbjct: 449 ASIKIAPAEGPDAKLRMVIITGPPEAQFKA 478
Score = 37.0 bits (84), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 119 CSPQP---LQLKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVH 175
P+P + L++++P G++IGK G I++I + + + + + E+ +T+H
Sbjct: 197 ARPKPQSEVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIH 256
Query: 176 GNPDTISQAIYQICLVLIE 194
P+ S A C +++E
Sbjct: 257 STPEGCSAA----CKIIME 271
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 58/146 (39%), Gaps = 29/146 (19%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSVETGYPGHT 86
+ +IG G +++L + +GA I I PD R+V ++G + +
Sbjct: 429 VGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFKAQ--------- 479
Query: 87 LWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKI 146
+ NF E L+ + +P+ G +IGKGG +
Sbjct: 480 ---GRIYGKLKEENFFGPKEEVK--------------LEAHIKVPSYAAGRVIGKGGKTV 522
Query: 147 KDIRDLSGANVQVASDMLPMSTERIV 172
++++L+ A V V D P +++V
Sbjct: 523 NELQNLTSAEVVVPRDQTPDENDQVV 548
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG + +++++SG K+ I+ G P+R V+++G+ ++ + +
Sbjct: 156 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKM--------- 206
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+D++ + +H N N +N + Q +++IPA G +IGKGG IK
Sbjct: 207 ---MLDDIVS--RGRGGPPGQFHDNANGGQNGTVQ----EIMIPAGKAGLVIGKGGETIK 257
Query: 148 DIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+++ +G + + D + ++ + + G+P + QA + +L E
Sbjct: 258 QLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGY 82
V + + +IG G ++++++ ++G +I DG P++I + G D ++
Sbjct: 329 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARII-- 386
Query: 83 PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKG 142
+ S+ + N P ++ IP CG +IG+G
Sbjct: 387 ---NDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 443
Query: 143 GCKIKDIRDLSGANVQVASDMLPMSTE--RIVTVHGNPDTISQA 184
G +K I +GA V+++ + P ++ + G+P I A
Sbjct: 444 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHA 487
Score = 35.4 bits (80), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM--LPMSTERIVTVHGNPDTISQA 184
+P G +IG+GG +I I+ SG VQ++ D LP ER V++ G P+++ +A
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 204
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 83/168 (49%), Gaps = 21/168 (12%)
Query: 30 ISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGYPGHTL 87
+ +IG GG + +++++SG K+ I+ G P+R V+++G+ ++ + +
Sbjct: 157 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESVQKAKM--------- 207
Query: 88 WVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKGGCKIK 147
+D++ + +H N N +N + Q +++IPA G +IGKGG IK
Sbjct: 208 ---MLDDIVS--RGRGGPPGQFHDNANGGQNGTVQ----EIMIPAGKAGLVIGKGGETIK 258
Query: 148 DIRDLSGANVQVASD-MLPMSTERIVTVHGNPDTISQAIYQICLVLIE 194
+++ +G + + D + ++ + + G+P + QA + +L E
Sbjct: 259 QLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 67/164 (40%), Gaps = 9/164 (5%)
Query: 25 VNVNEISCLIGPGGCIVRRLRKESGAKISIT--DGACPDRIVTVSGSVDNSSTSSVETGY 82
V + + +IG G ++++++ ++G +I DG P++I + G D ++
Sbjct: 330 VPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKIAHIMGPPDRCEHAARII-- 387
Query: 83 PGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSLIGKG 142
+ S+ + N P ++ IP CG +IG+G
Sbjct: 388 ---NDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGEMTFSIPTHKCGLVIGRG 444
Query: 143 GCKIKDIRDLSGANVQVASDMLPMSTE--RIVTVHGNPDTISQA 184
G +K I +GA V+++ + P ++ + G+P I A
Sbjct: 445 GENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHA 488
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Query: 130 IPATHCGSLIGKGGCKIKDIRDLSGANVQVASDM--LPMSTERIVTVHGNPDTISQA 184
+P G +IG+GG +I I+ SG VQ++ D LP ER V++ G P+++ +A
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP---ERSVSLTGAPESVQKA 205
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 27/203 (13%)
Query: 15 ITMRCLFHSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGA-----CPDRIVTVSGS 69
+ ++ L H+ N + LIG G ++++ +++ KI+I+ P+R +TV GS
Sbjct: 280 VPLKVLAHN----NFVGRLIGKEGRNLKKVEQDTDTKITISPLQDLTLYNPERTITVKGS 335
Query: 70 VD------NSSTSSVETGYPGHTLWVTSVDNVCTAYNFMCRSL--EDYHINRNRMENCSP 121
++ V Y + ++ N L + + N P
Sbjct: 336 IEACCLAEQEIMKKVREAYDNDIAAMNQQTHLIPGLNLGAIGLFPPSSAMPPPALGNSVP 395
Query: 122 QPLQ----------LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERI 171
P + + IPA G+LIGK G IK + +GA++++A P S R+
Sbjct: 396 GPPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRM 455
Query: 172 VTVHGNPDTISQAIYQICLVLIE 194
V V G P+ +A +I L E
Sbjct: 456 VIVTGPPEAQFKAQGRIYGKLKE 478
Score = 38.5 bits (88), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 126 LKLVIPATHCGSLIGKGGCKIKDIRDLSGANVQVASDMLPMSTERIVTVHGNPDTISQAI 185
L+L++P + G++IGK G I++I + + + V + E+ +++H P+ S A
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAA- 259
Query: 186 YQICLVLIECTLQVVK 201
C +++E Q K
Sbjct: 260 ---CRMILEIMNQEAK 272
Score = 36.6 bits (83), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 29/154 (18%)
Query: 22 HSSVNVNEISCLIGPGGCIVRRLRKESGAKISITDGACPD---RIVTVSGSVDNSSTSSV 78
H + + LIG G +++L + +GA I I PD R+V V+G + +
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVIVTGPPEAQFKAQ- 469
Query: 79 ETGYPGHTLWVTSVDNVCTAYNFMCRSLEDYHINRNRMENCSPQPLQLKLVIPATHCGSL 138
+ NF E L+ + + A G +
Sbjct: 470 -----------GRIYGKLKEENFFGPKEEVK--------------LETHIKVAAAAAGRV 504
Query: 139 IGKGGCKIKDIRDLSGANVQVASDMLPMSTERIV 172
IGKGG + ++++L+ A V V + P ++++
Sbjct: 505 IGKGGKTVNELQNLTAAEVVVPREQTPDEHDQVI 538
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,953,210
Number of Sequences: 539616
Number of extensions: 7168945
Number of successful extensions: 21927
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 21059
Number of HSP's gapped (non-prelim): 798
length of query: 433
length of database: 191,569,459
effective HSP length: 120
effective length of query: 313
effective length of database: 126,815,539
effective search space: 39693263707
effective search space used: 39693263707
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)