BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11930
(274 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBG9|PLS2_BOVIN Phospholipid scramblase 2 OS=Bos taurus GN=PLSCR2 PE=2 SV=1
Length = 293
Score = 277 bits (708), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 130/224 (58%), Positives = 161/224 (71%), Gaps = 2/224 (0%)
Query: 38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
WM P P NCPPGLEYLT +DQL++ Q++ELLE LIG+ETNNK+ +KN+ GQ+++ A
Sbjct: 67 WMPAPL-PPLNCPPGLEYLTQIDQLLIHQQIELLEVLIGFETNNKYEIKNSLGQRIYFAA 125
Query: 98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
E DCCTRNCCGP RPF M++LDN EVI ERPL C SC FPCCLQ + + +PPG +
Sbjct: 126 EDTDCCTRNCCGPSRPFTMRILDNMGREVITLERPLRCTSCCFPCCLQEIEIQAPPGVPV 185
Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
G + Q W P F I+N + VLRI GP C C D+DF++ S D + VG+ISK
Sbjct: 186 GYVTQTWHPCLPKFTIQNERREDVLRISGP-CVICSCCADIDFEVKSLDDKYVVGKISKH 244
Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYE 261
W+GL++E FTD D FGI FP DLDV+MKAVMLGACFLID MF+E
Sbjct: 245 WTGLIKELFTDVDNFGIQFPLDLDVKMKAVMLGACFLIDFMFFE 288
>sp|Q9JJ00|PLS1_MOUSE Phospholipid scramblase 1 OS=Mus musculus GN=Plscr1 PE=2 SV=1
Length = 328
Score = 268 bits (684), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 157/217 (72%), Gaps = 1/217 (0%)
Query: 52 GLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPL 111
GLEYL +DQL+V Q++ELLE L G+ETNNK+ +KN+ GQ+V+ AVE DCCTRNCCG
Sbjct: 107 GLEYLAQIDQLLVHQQIELLEVLTGFETNNKYEIKNSLGQRVYFAVEDTDCCTRNCCGAS 166
Query: 112 RPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF 171
RPF +++LDN EV+ ERPL C SC FPCCLQ + + +PPG +G + Q W P F
Sbjct: 167 RPFTLRILDNLGREVMTLERPLRCSSCCFPCCLQEIEIQAPPGVPVGYVTQTWHPCLPKF 226
Query: 172 VIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADY 231
++N VL++ GP C C D+DF++ S D ++ VG+ISKQWSG +REAFTDAD
Sbjct: 227 TLQNEKKQDVLKVVGP-CVVCSCCSDIDFELKSLDEESVVGKISKQWSGFVREAFTDADN 285
Query: 232 FGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRES 268
FGI FP DLDV+MKAVMLGACFLID MF+E+ GN E
Sbjct: 286 FGIQFPLDLDVKMKAVMLGACFLIDFMFFERTGNEEQ 322
>sp|P58195|PLS1_RAT Phospholipid scramblase 1 OS=Rattus norvegicus GN=Plscr1 PE=1 SV=1
Length = 335
Score = 266 bits (679), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 158/217 (72%), Gaps = 1/217 (0%)
Query: 52 GLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPL 111
GLEYLT +DQ++V Q++ELLE L G+ETNNK+ +KN+ GQ+V+ AVE DCCTRNCCG
Sbjct: 115 GLEYLTQIDQILVHQQIELLEVLTGFETNNKYEIKNSLGQRVYFAVEDTDCCTRNCCGAS 174
Query: 112 RPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF 171
RPF +++LDN EV+ ERPL C SC FPCCLQ + + +PPG +G + Q W P F
Sbjct: 175 RPFTLRILDNMGREVMTLERPLRCSSCCFPCCLQEIEIQAPPGVPVGYVIQTWHPCLPKF 234
Query: 172 VIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADY 231
++N VL++ GP C C D+DF++ S D ++ VG+ISKQWSG +REAFTDAD
Sbjct: 235 TLQNEKRQDVLKVVGP-CVVCSCCSDIDFELKSLDEESVVGKISKQWSGFVREAFTDADN 293
Query: 232 FGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRES 268
FGI FP DLDV+MKAVMLGACFLID MF+E+ GN E
Sbjct: 294 FGIQFPLDLDVKMKAVMLGACFLIDFMFFERTGNEEQ 330
>sp|O15162|PLS1_HUMAN Phospholipid scramblase 1 OS=Homo sapiens GN=PLSCR1 PE=1 SV=1
Length = 318
Score = 263 bits (673), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 167/230 (72%), Gaps = 2/230 (0%)
Query: 38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
WM PQ P NCPPGLEYL+ +DQ+++ Q++ELLE L G+ETNNK+ +KN+ GQ+V+ A
Sbjct: 85 WMPAPQ-PPLNCPPGLEYLSQIDQILIHQQIELLEVLTGFETNNKYEIKNSFGQRVYFAA 143
Query: 98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALI 157
E DCCTRNCCGP RPF ++++DN EVI ERPL C SC PCCLQ + + +PPG I
Sbjct: 144 EDTDCCTRNCCGPSRPFTLRIIDNMGQEVITLERPLRCSSCCCPCCLQEIEIQAPPGVPI 203
Query: 158 GSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQ 217
G + Q W P F I+N + VL+I GP C C GDVDF+I S D Q VG+ISK
Sbjct: 204 GYVIQTWHPCLPKFTIQNEKREDVLKISGP-CVVCSCCGDVDFEIKSLDEQCVVGKISKH 262
Query: 218 WSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRE 267
W+G+LREAFTDAD FGI FP DLDV+MKAVM+GACFLID MF+E G++E
Sbjct: 263 WTGILREAFTDADNFGIQFPLDLDVKMKAVMIGACFLIDFMFFESTGSQE 312
>sp|Q9DCW2|PLS2_MOUSE Phospholipid scramblase 2 OS=Mus musculus GN=Plscr2 PE=2 SV=3
Length = 307
Score = 263 bits (672), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 161/233 (69%), Gaps = 2/233 (0%)
Query: 29 KSTLWKNGGWMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNA 88
++ + N WM P NCPPGLEYL +DQL++ Q+VELLE L G+ETNNKF +KN+
Sbjct: 74 QTIVLANTQWMPAPPPI-LNCPPGLEYLNQIDQLLIHQQVELLEVLTGFETNNKFEIKNS 132
Query: 89 QGQKVFLAVEINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLN 148
GQ V++AVE DCCTRNCC RPF +++LD+ EV+ ERPL C SC FPCCLQ +
Sbjct: 133 LGQMVYVAVEDTDCCTRNCCEASRPFTLRILDHLGQEVMTLERPLKCSSCCFPCCLQEIE 192
Query: 149 VFSPPGALIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQ 208
+ +PPG IG + Q W P ++N + VL++ GP C C D+DF+I S D
Sbjct: 193 IQAPPGVPIGYVTQTWHPCLPKLTLQNDKRENVLKVVGP-CVACTCCSDIDFEIKSLDEV 251
Query: 209 TEVGRISKQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYE 261
T +G+I+KQWSG ++EAFTD+D FGI FP DL+V+MKAV LGACFLID MF+E
Sbjct: 252 TRIGKITKQWSGCVKEAFTDSDNFGIQFPLDLEVKMKAVTLGACFLIDYMFFE 304
>sp|Q6QBQ4|PLS3_RAT Phospholipid scramblase 3 OS=Rattus norvegicus GN=Plscr3 PE=2 SV=1
Length = 296
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/222 (46%), Positives = 138/222 (62%), Gaps = 1/222 (0%)
Query: 50 PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
P GLE+L +DQ+++ QK E +E +GWET N++ +++ GQ++ A E ++CC R CCG
Sbjct: 74 PSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGTGQQLGQAAEESNCCARLCCG 133
Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
RP +++ D EV+ RPL C PC LQ + V +PPG IG + Q W P
Sbjct: 134 ARRPLRIRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFIP 193
Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
F I + VLR+ GP C CG D +F++ ++D VGRISKQW GLLREA TDA
Sbjct: 194 KFSILDADRQPVLRVVGPCCTCG-CGTDTNFEVKTKDESRSVGRISKQWGGLLREALTDA 252
Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGI 271
D FG+ FP DLDVR+KAV+LGA FLID MF+EK G I
Sbjct: 253 DDFGLQFPVDLDVRVKAVLLGATFLIDYMFFEKRGGAGPSAI 294
>sp|A0PG75|PLS5_HUMAN Phospholipid scramblase family member 5 OS=Homo sapiens GN=PLSCR5
PE=2 SV=2
Length = 271
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 143/214 (66%), Gaps = 1/214 (0%)
Query: 50 PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
PPGLEYL+ +D +++ Q+VELL ++G ET+NK+ +KN+ GQ+++ AVE + C R C
Sbjct: 55 PPGLEYLSQLDLIIIHQQVELLGMILGTETSNKYEIKNSLGQRIYFAVEESICFNRTFCS 114
Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
LR +++ DN EVI RPL C+SCW PC LQ L + +PPG ++G + Q+W P
Sbjct: 115 TLRSCTLRITDNSGREVITVNRPLRCNSCWCPCYLQELEIQAPPGTIVGYVTQKWDPFLP 174
Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
F I+N + +L+I GP C C GDVDF++ + + + +G+ISK WSG + + FT+A
Sbjct: 175 KFTIQNANKEDILKIVGP-CVTCGCFGDVDFEVKTINEKLTIGKISKYWSGFVNDVFTNA 233
Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKA 263
D FGI P DLDV +KA M+GACFL D MF+E +
Sbjct: 234 DNFGIHVPADLDVTVKAAMIGACFLFDFMFFEHS 267
>sp|Q9JIZ9|PLS3_MOUSE Phospholipid scramblase 3 OS=Mus musculus GN=Plscr3 PE=1 SV=1
Length = 296
Score = 214 bits (546), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/222 (47%), Positives = 139/222 (62%), Gaps = 1/222 (0%)
Query: 50 PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
PPGLE+L +DQ+++ QK E +E +GWET N + +++ GQ++ A E ++CC R CCG
Sbjct: 74 PPGLEFLVQIDQILIHQKAERVETFLGWETCNMYELRSGTGQQLGQAAEESNCCARLCCG 133
Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
RPF +++ D EV+ RPL C PC LQ + V +PPG IG + Q W P
Sbjct: 134 ARRPFRIRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLP 193
Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
F I + VLR+ GP C CG D +F++ ++D VGRISKQW GLLREA TDA
Sbjct: 194 KFSILDADRQPVLRVVGP-CWTCGCGTDTNFEVKTKDESRSVGRISKQWGGLLREALTDA 252
Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRESDGI 271
D FG+ FP DLDV++KAV+LGA FLID MF+EK G I
Sbjct: 253 DDFGLQFPVDLDVKVKAVLLGATFLIDYMFFEKRGGAGPSAI 294
>sp|Q9NRY6|PLS3_HUMAN Phospholipid scramblase 3 OS=Homo sapiens GN=PLSCR3 PE=1 SV=2
Length = 295
Score = 213 bits (543), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 137/216 (63%), Gaps = 1/216 (0%)
Query: 50 PPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCG 109
P GLE+L +DQ+++ QK E +E +GWET N++ +++ GQ + A E ++CC R CCG
Sbjct: 73 PSGLEFLVQIDQILIHQKAERVETFLGWETCNRYELRSGAGQPLGQAAEESNCCARLCCG 132
Query: 110 PLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTP 169
RP +++ D EV+ RPL C PC LQ + V +PPG IG + Q W P
Sbjct: 133 ARRPLRVRLADPGDREVLRLLRPLHCGCSCCPCGLQEMEVQAPPGTTIGHVLQTWHPFLP 192
Query: 170 IFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDA 229
F I++ VLR+ GP C CG D +F++ +RD VGRISKQW GL+REA TDA
Sbjct: 193 KFSIQDADRQTVLRVVGP-CWTCGCGTDTNFEVKTRDESRSVGRISKQWGGLVREALTDA 251
Query: 230 DYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGN 265
D FG+ FP DLDVR+KAV+LGA FLID MF+EK G
Sbjct: 252 DDFGLQFPLDLDVRVKAVLLGATFLIDYMFFEKRGG 287
>sp|Q9NRY7|PLS2_HUMAN Phospholipid scramblase 2 OS=Homo sapiens GN=PLSCR2 PE=1 SV=1
Length = 224
Score = 208 bits (529), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 111/212 (52%), Positives = 144/212 (67%), Gaps = 1/212 (0%)
Query: 52 GLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVEINDCCTRNCCGPL 111
GLEYL+ +D +++ Q++ELLE L +E++N + +KN+ GQ+++ A E + C RNCCG
Sbjct: 13 GLEYLSQIDMILIHQQIELLEVLFSFESSNMYEIKNSFGQRIYFAAEDTNFCIRNCCGRS 72
Query: 112 RPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPPGALIGSIEQEWSLLTPIF 171
RPF +++ DN EVI ERPL C+ C PCCLQ + + +PPG +G + Q W F
Sbjct: 73 RPFTLRITDNVGREVITLERPLRCNCCCCPCCLQEIEIQAPPGVPVGYVTQTWHPCLTKF 132
Query: 172 VIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRISKQWSGLLREAFTDADY 231
IKN + VL+I GP C C VDF+I S D Q VGRISK WSG LREAFTDAD
Sbjct: 133 TIKNQKREDVLKISGP-CIVCSCIAGVDFEITSLDEQIVVGRISKHWSGFLREAFTDADN 191
Query: 232 FGISFPGDLDVRMKAVMLGACFLIDAMFYEKA 263
FGI FP DLDV+MKAVM+GACFLID MF+E+
Sbjct: 192 FGIQFPRDLDVKMKAVMIGACFLIDYMFFERT 223
>sp|Q9NRQ2|PLS4_HUMAN Phospholipid scramblase 4 OS=Homo sapiens GN=PLSCR4 PE=1 SV=2
Length = 329
Score = 182 bits (462), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 137/233 (58%), Gaps = 5/233 (2%)
Query: 38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
WM P ANCPPGLEYL +D + V Q E LE + +ETNN++ +KN Q V++
Sbjct: 99 WMPGPTPM-ANCPPGLEYLVQLDNIHVLQHFEPLEMMTCFETNNRYDIKNNSDQMVYIVT 157
Query: 98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPL--ACDSCWFPCCLQSLNVFSPPGA 155
E D TRN LRPF ++V D E++ +RP C P Q L V PPG
Sbjct: 158 EDTDDFTRNAYRTLRPFVLRVTDCMGREIMTMQRPFRCTCCCFCCPSARQELEVQCPPGV 217
Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
IG + + W+L ++ I+N + V+R+ GP Y CG D F++ S DG + +G I
Sbjct: 218 TIGFVAEHWNLCRAVYSIQNEKKENVMRVRGPCSTYG-CGSDSVFEVKSLDGISNIGSII 276
Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNRES 268
++W+GLL A DAD+F I FP DLDV+MKA++ GACFLID M++E++ + S
Sbjct: 277 RKWNGLL-SAMADADHFDIHFPLDLDVKMKAMIFGACFLIDFMYFERSPPQRS 328
>sp|P58196|PLS4_MOUSE Phospholipid scramblase 4 OS=Mus musculus GN=Plscr4 PE=2 SV=2
Length = 326
Score = 168 bits (425), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 133/231 (57%), Gaps = 5/231 (2%)
Query: 38 WMNIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAV 97
WM P P NCPPGLEYL +D + V Q VE LE + +ETNN++ +KN Q V++
Sbjct: 95 WMAGPAPVP-NCPPGLEYLAQLDNIHVLQHVEPLELMTRFETNNRYDIKNNIDQMVYIVT 153
Query: 98 EINDCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPL--ACDSCWFPCCLQSLNVFSPPGA 155
E D TRN LRPF ++V D E++ +RP C PC Q L V PPG
Sbjct: 154 EDTDDFTRNAYRNLRPFVLRVTDCLGREIMTMQRPFRCTCCCFCCPCARQELEVQCPPGV 213
Query: 156 LIGSIEQEWSLLTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGRIS 215
IG + + W+L + I+N + ++R+ GP Y CG D F+I S DG + +G I
Sbjct: 214 TIGFVAEHWNLCRASYSIQNEKKESMMRVRGPCATYG-CGSDSVFEINSLDGVSNIGSII 272
Query: 216 KQWSGLLREAFTDADYFGISFPGDLDVRMKAVMLGACFLIDAMFYEKAGNR 266
++W+G L +AD+F I FP LDV+MKA++ G+CFLID M++E+ R
Sbjct: 273 RKWNGFL-STMVNADHFEIRFPLALDVKMKAMIFGSCFLIDFMYFERPPPR 322
>sp|Q9UT84|YIP6_SCHPO Phospholipid scramblase family protein C343.06c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC343.06c PE=3 SV=1
Length = 381
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 105/255 (41%), Gaps = 53/255 (20%)
Query: 46 PANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVE-----IN 100
P N P L + D L+V++++E++ +G+E N++ + N QGQ + E I
Sbjct: 65 PLNSPAAP--LLSQDVLIVERQLEMMNVFLGYEQANRYVILNQQGQHLGYIAEQGASSIL 122
Query: 101 DCCTRNCCGPLRPFEMKVLDNYKNEVIHFERPLACDSCWFPCCLQ--SLNVFSPPGALIG 158
+R R F+ V+D+ V+ RP + W LQ S++ L+G
Sbjct: 123 SSLSRQFFHTHRAFKADVMDSNGQLVLQLNRPFS----WINSRLQIHSIDYSKFSSTLVG 178
Query: 159 SIEQEWSL---LTPIFVIKNGAGDIVLRIEGPICRYSMCGGDVDFKILSRDGQTEV-GRI 214
+ Q+W L +F+ K + +I+ + + + L R+ Q + G +
Sbjct: 179 EVLQKWHLWRRRYELFLAKRSMFEQFAKIDERVLSW---------EFLLRNEQDRILGSV 229
Query: 215 SKQWSGLLREAFTDADYFGISFPG---------------------------DLDVRMKAV 247
S+ + GL RE FTD + + F D+ + +AV
Sbjct: 230 SRNFMGLPREFFTDTGNYVLRFTSTSAANGSVNENQLLQAAHGIANDVCARDMSLEERAV 289
Query: 248 MLGACFLIDAMFYEK 262
MLG+ ID ++ +
Sbjct: 290 MLGSAVTIDFDYFSR 304
>sp|P47140|AIM25_YEAST Altered inheritance rate of mitochondria protein 25
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=AIM25 PE=1 SV=1
Length = 327
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/253 (19%), Positives = 95/253 (37%), Gaps = 60/253 (23%)
Query: 62 LMVKQKVELLEALIGWETNNKFTVKNAQGQKVFLAVE----INDCCTRNCCGPLRPFEMK 117
+++++++E + +G+E N++ + + G K+ +E I R RPF +
Sbjct: 81 VIIERQIEFMNVFLGFEQANRYAIMDVNGNKIASMMERDFSITKAIMRQFYRLHRPFLVD 140
Query: 118 VLDNYKNEVIHFERPLACDSCWFPCCLQSLNVFSPP------------------GALIGS 159
V DN+ N ++ +RP + + + PP G +G
Sbjct: 141 VFDNWGNVIMTIKRPFSFINSHIKTII-------PPSAYVDNGSDSTHYHDGKEGTTVGE 193
Query: 160 IEQEWSLLTPIFVIKNGAG------DIVLRIEGPICRYSMCGGDVDFKILSRDGQTEVGR 213
Q W L + + G D +I+ P + D D KI++
Sbjct: 194 TIQNWHLWRRRYELFQKDGVEGSTFDQFGKIDAPFLSFDFPVTDADGKIMA--------S 245
Query: 214 ISKQWSGLLREAFTDADYFGISFPGD----------------LDVRMKAVMLGACFLIDA 257
+ + W GL RE FTD + + F L + +AV+L ID
Sbjct: 246 VDRNWVGLGREMFTDTGVYVVRFDSQRCFDNIYPTEMLSSQVLTLDQRAVLLANAVSIDF 305
Query: 258 MFYEKAGNRESDG 270
++ + +R++ G
Sbjct: 306 DYFSRH-SRQTGG 317
>sp|Q9H2M9|RBGPR_HUMAN Rab3 GTPase-activating protein non-catalytic subunit OS=Homo
sapiens GN=RAB3GAP2 PE=1 SV=1
Length = 1393
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 2 EYQGSKDFFMPNKREDSYSTLSWRKAIKSTLWKNGGW 38
+ Q ++DF P+ RE+ S R KST W++ GW
Sbjct: 13 DLQAARDFLFPHLREEILSGALRRDPSKSTDWEDDGW 49
>sp|Q32KN2|BNIP3_BOVIN BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 OS=Bos
taurus GN=BNIP3 PE=2 SV=1
Length = 196
Score = 31.2 bits (69), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 25 RKAIKSTLWKNGGWMNIPQGRPANCPPGLEYL 56
RK ++S L KN W+ RP N PP E+L
Sbjct: 103 RKEVESILKKNSDWIWDWSSRPENVPPAKEFL 134
>sp|A9BAK7|TPIS_PROM4 Triosephosphate isomerase OS=Prochlorococcus marinus (strain MIT
9211) GN=tpiA PE=3 SV=1
Length = 243
Score = 30.8 bits (68), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 40 NIPQGRPANCPPGLEYLTTVDQLMVKQKVELLEALIGWETNNKFTVK 86
N+P+GR P ++T+ +++ V L + WE N FT +
Sbjct: 32 NVPKGRELVLAPPFTAISTLSEILKGSNVSLSSQNVHWEDNGAFTAE 78
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.452
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,041,375
Number of Sequences: 539616
Number of extensions: 4716497
Number of successful extensions: 8847
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 8811
Number of HSP's gapped (non-prelim): 18
length of query: 274
length of database: 191,569,459
effective HSP length: 116
effective length of query: 158
effective length of database: 128,974,003
effective search space: 20377892474
effective search space used: 20377892474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)