Query psy11937
Match_columns 302
No_of_seqs 141 out of 728
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 22:49:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11937.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11937hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0229|consensus 100.0 2.1E-79 4.6E-84 581.7 23.4 291 1-301 126-419 (420)
2 cd00139 PIPKc Phosphatidylinos 100.0 2.3E-76 4.9E-81 555.4 23.2 223 1-301 85-312 (313)
3 smart00330 PIPKc Phosphatidyli 100.0 8.5E-75 1.8E-79 551.0 24.9 279 1-301 58-342 (342)
4 PF01504 PIP5K: Phosphatidylin 100.0 6.9E-74 1.5E-78 525.7 17.0 247 1-301 3-252 (252)
5 PLN03185 phosphatidylinositol 100.0 4.5E-68 9.7E-73 542.3 26.0 291 1-302 432-765 (765)
6 KOG0230|consensus 100.0 1.1E-56 2.5E-61 469.8 13.4 221 1-301 1354-1586(1598)
7 COG5253 MSS4 Phosphatidylinosi 100.0 2.6E-53 5.6E-58 407.0 9.3 227 1-302 363-597 (612)
8 PLN02667 inositol polyphosphat 72.9 12 0.00026 35.3 6.8 70 22-98 23-99 (286)
9 PF12226 Astro_capsid_p: Turke 68.4 3.2 6.9E-05 36.2 1.7 24 10-33 133-156 (230)
10 PRK10345 hypothetical protein; 66.2 33 0.00072 30.6 8.0 71 11-83 11-86 (210)
11 PHA02988 hypothetical protein; 61.4 31 0.00068 31.3 7.1 75 10-86 28-106 (283)
12 PF01636 APH: Phosphotransfera 55.3 70 0.0015 27.2 8.0 74 10-86 5-79 (239)
13 cd00180 PKc Catalytic domain o 51.6 69 0.0015 26.0 7.1 70 11-85 2-74 (215)
14 cd06641 STKc_MST3 Catalytic do 44.5 81 0.0018 28.0 6.9 69 11-84 13-84 (277)
15 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 44.1 99 0.0021 27.5 7.4 72 10-85 12-90 (284)
16 cd06621 PKc_MAPKK_Pek1_like Ca 43.1 92 0.002 27.9 7.1 73 10-85 9-84 (287)
17 PF10411 DsbC_N: Disulfide bon 42.8 20 0.00044 25.2 2.0 15 15-29 32-46 (57)
18 cd05122 PKc_STE Catalytic doma 38.2 1.6E+02 0.0034 25.0 7.5 69 11-85 9-80 (253)
19 cd06613 STKc_MAP4K3_like Catal 37.8 1.2E+02 0.0027 26.2 6.9 69 11-85 12-83 (262)
20 cd06608 STKc_myosinIII_like Ca 37.6 1.8E+02 0.0038 25.3 7.9 73 11-85 15-92 (275)
21 PF02958 EcKinase: Ecdysteroid 37.5 87 0.0019 28.6 6.0 58 25-86 27-100 (294)
22 cd05611 STKc_Rim15_like Cataly 36.9 2.1E+02 0.0046 24.8 8.3 71 10-85 4-80 (260)
23 PF06296 DUF1044: Protein of u 35.0 78 0.0017 26.0 4.6 46 6-51 47-104 (120)
24 cd05060 PTKc_Syk_like Catalyti 33.9 1.6E+02 0.0034 25.7 6.9 68 11-85 4-78 (257)
25 PLN00034 mitogen-activated pro 32.4 1.5E+02 0.0032 27.7 6.8 68 11-84 83-154 (353)
26 cd05595 STKc_PKB_beta Catalyti 32.3 2E+02 0.0044 26.4 7.7 67 12-85 5-78 (323)
27 KOG4620|consensus 32.3 57 0.0012 24.5 3.0 35 261-301 7-41 (80)
28 cd06649 PKc_MEK2 Catalytic dom 31.1 2.2E+02 0.0047 26.3 7.6 70 11-85 14-86 (331)
29 cd05040 PTKc_Ack_like Catalyti 30.7 2E+02 0.0043 24.9 7.0 68 11-85 4-78 (257)
30 cd06611 STKc_SLK_like Catalyti 30.2 2.1E+02 0.0045 25.3 7.2 69 11-85 14-85 (280)
31 PTZ00263 protein kinase A cata 30.0 2.3E+02 0.005 26.1 7.7 69 12-86 28-102 (329)
32 cd07868 STKc_CDK8 Catalytic do 29.8 1.2E+02 0.0026 27.5 5.6 114 10-156 9-129 (317)
33 cd05629 STKc_NDR_like_fungal C 29.2 3.1E+02 0.0068 25.7 8.5 69 11-84 10-83 (377)
34 cd05600 STKc_Sid2p_Dbf2p Catal 28.3 2.9E+02 0.0062 25.4 8.0 69 11-85 10-84 (333)
35 cd06645 STKc_MAP4K3 Catalytic 28.0 2.4E+02 0.0052 24.6 7.1 68 11-84 18-88 (267)
36 cd05579 STKc_MAST_like Catalyt 27.9 1.7E+02 0.0036 25.2 6.0 68 12-85 3-76 (265)
37 cd05599 STKc_NDR_like Catalyti 27.8 2.6E+02 0.0057 26.0 7.7 69 11-84 10-83 (364)
38 cd08219 STKc_Nek3 Catalytic do 27.7 2.6E+02 0.0056 24.2 7.2 69 10-85 8-81 (255)
39 KOG0581|consensus 27.7 1.7E+02 0.0037 28.6 6.3 71 10-88 87-164 (364)
40 cd05591 STKc_nPKC_epsilon Cata 27.4 3E+02 0.0066 25.1 7.9 70 11-85 4-79 (321)
41 PHA03390 pk1 serine/threonine- 27.0 2.1E+02 0.0046 25.3 6.6 64 11-84 25-91 (267)
42 PTZ00267 NIMA-related protein 26.7 2.3E+02 0.0049 28.1 7.3 69 12-86 77-149 (478)
43 cd05597 STKc_DMPK_like Catalyt 26.3 3.5E+02 0.0075 24.9 8.2 69 11-84 10-83 (331)
44 cd05150 APH Aminoglycoside 3'- 26.1 2.1E+02 0.0045 25.2 6.3 68 10-85 6-75 (244)
45 KOG0610|consensus 25.0 2.7E+02 0.0059 27.9 7.2 71 12-86 87-161 (459)
46 cd05601 STKc_CRIK Catalytic do 24.9 3.1E+02 0.0067 25.1 7.5 69 11-84 10-83 (330)
47 cd05574 STKc_phototropin_like 24.5 2.3E+02 0.0051 25.5 6.5 70 11-86 10-85 (316)
48 cd08218 STKc_Nek1 Catalytic do 24.0 4.5E+02 0.0098 22.5 8.1 69 11-85 9-82 (256)
49 cd05575 STKc_SGK Catalytic dom 24.0 3.8E+02 0.0083 24.5 7.9 70 11-85 4-79 (323)
50 cd05077 PTK_Jak1_rpt1 Pseudoki 23.8 3.2E+02 0.007 24.0 7.2 53 26-85 34-87 (262)
51 cd06640 STKc_MST4 Catalytic do 23.6 3.4E+02 0.0074 23.9 7.3 70 10-85 12-85 (277)
52 cd06648 STKc_PAK_II Catalytic 23.5 3.2E+02 0.0069 24.4 7.2 70 10-85 27-99 (285)
53 cd05617 STKc_aPKC_zeta Catalyt 23.5 4.5E+02 0.0097 24.1 8.3 69 11-84 4-78 (327)
54 cd05039 PTKc_Csk_like Catalyti 23.0 3.1E+02 0.0068 23.6 6.9 68 10-84 14-82 (256)
55 cd06644 STKc_STK10_LOK Catalyt 22.9 3.6E+02 0.0078 24.0 7.4 67 11-84 21-91 (292)
56 cd05571 STKc_PKB Catalytic dom 22.8 3.6E+02 0.0078 24.7 7.5 67 12-85 5-78 (323)
57 cd05052 PTKc_Abl Catalytic dom 22.4 2.6E+02 0.0056 24.4 6.2 68 10-84 14-84 (263)
58 cd05570 STKc_PKC Catalytic dom 22.3 4E+02 0.0087 24.3 7.7 68 12-84 5-78 (318)
59 cd05120 APH_ChoK_like Aminogly 22.3 2.7E+02 0.0059 21.2 5.8 68 10-84 6-75 (155)
60 cd00192 PTKc Catalytic domain 22.3 3E+02 0.0065 23.5 6.5 68 12-84 5-78 (262)
61 cd06656 STKc_PAK3 Catalytic do 22.2 2.6E+02 0.0056 25.2 6.3 70 10-85 27-99 (297)
62 cd05589 STKc_PKN Catalytic dom 22.2 2.7E+02 0.0059 25.5 6.6 71 11-85 8-85 (324)
63 cd05618 STKc_aPKC_iota Catalyt 22.0 3.9E+02 0.0084 24.6 7.6 69 12-85 5-79 (329)
64 cd05038 PTKc_Jak_rpt2 Catalyti 21.8 3.5E+02 0.0075 23.6 7.0 73 10-85 12-91 (284)
65 cd07832 STKc_CCRK Catalytic do 21.8 3E+02 0.0064 24.2 6.5 69 10-84 8-81 (286)
66 cd05588 STKc_aPKC Catalytic do 21.7 4.4E+02 0.0096 24.2 7.9 70 12-85 5-79 (329)
67 cd05062 PTKc_IGF-1R Catalytic 21.7 2.4E+02 0.0051 24.9 5.9 69 10-84 14-91 (277)
68 cd05573 STKc_ROCK_NDR_like Cat 21.4 2.8E+02 0.0061 25.5 6.5 69 11-84 10-83 (350)
69 cd05620 STKc_nPKC_delta Cataly 21.4 3.6E+02 0.0078 24.6 7.2 70 12-85 5-79 (316)
70 cd05093 PTKc_TrkB Catalytic do 21.2 3.5E+02 0.0077 24.0 7.0 69 11-85 14-90 (288)
71 cd08229 STKc_Nek7 Catalytic do 21.2 4.1E+02 0.0088 23.0 7.3 68 11-85 11-85 (267)
72 cd05590 STKc_nPKC_eta Catalyti 21.2 3.3E+02 0.0072 24.9 6.9 69 11-84 4-78 (320)
73 cd06622 PKc_MAPKK_PBS2_like Ca 21.1 2E+02 0.0042 25.5 5.2 67 10-85 9-82 (286)
74 cd06606 STKc_MAPKKK Catalytic 21.1 3.9E+02 0.0085 22.5 7.0 70 11-84 9-83 (260)
75 cd08529 STKc_FA2-like Catalyti 21.0 4.4E+02 0.0095 22.5 7.3 70 10-85 8-82 (256)
76 cd05587 STKc_cPKC Catalytic do 20.8 4.5E+02 0.0097 24.0 7.7 70 11-85 9-84 (324)
77 cd05076 PTK_Tyk2_rpt1 Pseudoki 20.7 3.2E+02 0.0069 24.3 6.5 55 25-85 45-99 (274)
78 cd06917 STKc_NAK1_like Catalyt 20.6 2.8E+02 0.006 24.4 6.0 71 10-86 9-86 (277)
79 cd06618 PKc_MKK7 Catalytic dom 20.5 2.1E+02 0.0045 25.7 5.3 70 10-84 23-96 (296)
80 cd06612 STKc_MST1_2 Catalytic 20.4 4.8E+02 0.01 22.3 7.5 67 11-85 12-81 (256)
81 cd05613 STKc_MSK1_N N-terminal 20.2 4.2E+02 0.0092 23.4 7.3 72 10-85 8-88 (290)
82 cd06617 PKc_MKK3_6 Catalytic d 20.2 2.2E+02 0.0047 25.1 5.2 65 11-84 10-82 (283)
83 cd06650 PKc_MEK1 Catalytic dom 20.1 4.1E+02 0.0088 24.5 7.3 71 10-86 13-87 (333)
84 cd07859 STKc_TDY_MAPK_plant Ca 20.1 3.8E+02 0.0083 24.3 7.1 70 11-84 9-86 (338)
85 cd05154 ACAD10_11_like Acyl-Co 20.1 1.2E+02 0.0027 25.6 3.5 72 10-85 6-83 (223)
No 1
>KOG0229|consensus
Probab=100.00 E-value=2.1e-79 Score=581.72 Aligned_cols=291 Identities=41% Similarity=0.665 Sum_probs=228.3
Q ss_pred CCCCCCCCC-CCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCC-eEEEE
Q psy11937 1 MSWSQPIAV-ESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDG-VEHYV 78 (302)
Q Consensus 1 l~r~~~~~~-~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~-~~~~f 78 (302)
||+++|+.+ .+||||||+||+|+|.+||||||+++|.++|+++||.||+|+.++++.||||||||||+|+..+ .++||
T Consensus 126 lc~~~~l~e~sspGksGS~Fy~S~DdrFiIKTv~~~E~~~l~~mLp~Yy~~v~~~~~~TLl~kf~Gly~vk~~gg~k~yf 205 (420)
T KOG0229|consen 126 LCGNPPLRELSSPGKSGSFFYLSYDDRFIIKTVRKSEVKVLLKMLPGYYQHVVEQNNRTLLPKFFGLYRVKPDGGKKIYF 205 (420)
T ss_pred HhcchhhhhccCCCCccceEEEecCceEEEEeccHHHHHHHHHHHHHHHHHHHccCCceeehhhceeEEEeeCCCceEEE
Confidence 588999988 6669999999999999999999999999999999999999999877779999999999999954 99999
Q ss_pred EEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhccccccccccccc
Q psy11937 79 VAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMD 158 (302)
Q Consensus 79 vVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~IMD 158 (302)
|||+|+|+++..||++||||||+++|.++.+++.++.|||||+||++...+++|+++++++|++||++||+||++++|||
T Consensus 206 vVM~Nlf~~~~~iH~kyDLKGSt~~R~askke~~k~~pTlKDlDf~~~~~~~~l~~~~~~~l~~ql~~Dce~Le~~~IMD 285 (420)
T KOG0229|consen 206 VVMNNLFPSRLKVHRKYDLKGSTVGREASKKEKIKELPTLKDLDFLNEGQKLYLGKEAKKALLKQLKRDCEFLESLKIMD 285 (420)
T ss_pred EEecccCCCccceeEEeecCCCcccccccchhhccCCCccccchhhccCceEecCHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 99999999999999999999999999999889999999999999999888999999999999999999999999999999
Q ss_pred cceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcc-cccccccCCCCccCCCCceeccc
Q psy11937 159 YSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHT-LNRETSLQYDGAIIPELDIYAIP 237 (302)
Q Consensus 159 YSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~ 237 (302)
||||||||++.++..+..+.+.... .++...+.+..++.. ..+++..+.. .+...|...+ ...+.... .++
T Consensus 286 YSLLvGiH~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~i~~g~~~p~~~~-~~~~~~~~-~~~ 357 (420)
T KOG0229|consen 286 YSLLVGIHDRDRGQAEKEELEPQED----ESEREQRLSSASPED--VLTSTASPSIQLGANMPARAG-EERVDRME-YAP 357 (420)
T ss_pred hhheeeeeeccccccchhhcCCCCC----ccccccccccccccc--cCCCCCcccccCCCCCCCccc-cccccccc-ccc
Confidence 9999999999875443322111000 000000000000000 0111111110 1111122221 11111112 222
Q ss_pred CCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937 238 SAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM 301 (302)
Q Consensus 238 ~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if 301 (302)
.....+.+.|||+|||||||.|++.||+||+||++.+++ +.||||+|..|++||++||.++|
T Consensus 358 ~~~~~~~~~v~y~GIIDILq~Y~~~KK~EH~~Ksl~~d~--~tIS~v~P~~Ys~RF~dFi~~~~ 419 (420)
T KOG0229|consen 358 AQNSGGYDVVLYIGIIDILQDYDIKKKLEHAYKSLQHDP--DTISAVDPKFYAKRFLDFISNIF 419 (420)
T ss_pred ccccCcceEEEEEEeehhhhhcchhhHHHHHHhhhccCC--ceeeccCHHHHHHHHHHHHHhhc
Confidence 223346789999999999999999999999999999987 47999999999999999999987
No 2
>cd00139 PIPKc Phosphatidylinositol phosphate kinases (PIPK) catalyze the phosphorylation of phosphatidylinositol phosphate on the fourth or fifth hydroxyl of the inositol ring, to form phosphatidylinositol bisphosphate. CD alignment includes type II phosphatidylinositol phosphate kinases (PIPKII-beta), type I andII PIPK (-alpha, -beta, and -gamma) kinases and related yeast Fab1p and Mss4p kinases. Signaling by phosphorylated species of phosphatidylinositol regulates secretion, vesicular trafficking, membrane translocation, cell adhesion, chemotaxis, DNA synthesis, and cell cycling. The catalytic core domains of PIPKs are structurally similar to PI3K, PI4K, and cAMP-dependent protein kinases (PKA), the dimerization region is a unique feature of the PIPKs.
Probab=100.00 E-value=2.3e-76 Score=555.40 Aligned_cols=223 Identities=41% Similarity=0.710 Sum_probs=209.0
Q ss_pred CCCCCCCCCCCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCC-CcccceeeEEEEEEeC---CeEE
Q psy11937 1 MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHG-KTLLPQYLGMYRLTVD---GVEH 76 (302)
Q Consensus 1 l~r~~~~~~~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~-~slL~k~~G~~~i~~~---~~~~ 76 (302)
|++|.+|...|+|||||+||+|.|++||||||+++|+++|+++||+||+|+.+ || +|||+||||||+|++. +.+.
T Consensus 85 l~~~~~~e~~s~GKSGs~F~~T~D~rfiIKti~~~E~~~l~~~Lp~Y~~~~~~-n~~~TLL~k~~Gl~~i~~~~~~~~~~ 163 (313)
T cd00139 85 LCRSPLWELSSGGKSGSFFYKTLDDRFIIKTVSHSEIESLLKFLPNYYEYITQ-NPQNTLLPKFFGLYRVKVKSGTGKKV 163 (313)
T ss_pred hcCCCCccCCCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHHh-CCCCcchhhheEEEEEEEcCCCCceE
Confidence 57888888678999999999999999999999999999999999999999976 67 9999999999999988 7899
Q ss_pred EEEEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCC-ceEEeChHHHHHHHHHHhcccccccccc
Q psy11937 77 YVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGG-TKIVIGDEAKEKLLETLNADVEFLTNLH 155 (302)
Q Consensus 77 ~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~-~~i~l~~~~~~~l~~qL~~D~~FL~~~~ 155 (302)
|||||+|+|+++..||++||||||+++|.++++++.++.+||||+||.+.. .+|+|+++.++.|++||++||+||+++|
T Consensus 164 ~fvVM~Nlf~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlKD~df~~~~~~~i~l~~~~k~~l~~qL~~D~~FL~~~~ 243 (313)
T cd00139 164 DFLVMENLFYSRLKIHRKYDLKGSTRNREASKKEKQKENPVLKDLNLLEMIEQPLFVGEHSKKALLTQIKRDCEFLESLN 243 (313)
T ss_pred EEEEEecCCCCCccceEEEECCCCCCCCCcCcccccCCccccchhhhHhhcCceEEeCHHHHHHHHHHHHHHHHHHHHCC
Confidence 999999999998899999999999999999887777788999999999866 7999999999999999999999999999
Q ss_pred ccccceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcccccccccCCCCccCCCCceec
Q psy11937 156 LMDYSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYA 235 (302)
Q Consensus 156 IMDYSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (302)
|||||||||||..
T Consensus 244 iMDYSLLvGi~~~------------------------------------------------------------------- 256 (313)
T cd00139 244 IMDYSLLVGIHDI------------------------------------------------------------------- 256 (313)
T ss_pred CcccceEEEEecC-------------------------------------------------------------------
Confidence 9999999999952
Q ss_pred ccCCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937 236 IPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM 301 (302)
Q Consensus 236 i~~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if 301 (302)
+.+||+|||||||+|||+||+||++|++.++++ .+||||+|+.|++||++||+++|
T Consensus 257 ---------~~i~~~GIID~L~~y~~~Kk~E~~~K~~~~~~~-~~iS~v~P~~Y~~RF~~fi~~~f 312 (313)
T cd00139 257 ---------RLVLYLGIIDILRTYTWDKKLEHWVKSLGHDGG-KTPSVVSPEQYAKRFREFMDKYF 312 (313)
T ss_pred ---------CceEEEEEEeeeeeCCHHHHHHHHHHHhccCCC-CCcceECHHHHHHHHHHHHHHhc
Confidence 247999999999999999999999999998764 35999999999999999999998
No 3
>smart00330 PIPKc Phosphatidylinositol phosphate kinases.
Probab=100.00 E-value=8.5e-75 Score=550.96 Aligned_cols=279 Identities=38% Similarity=0.610 Sum_probs=214.8
Q ss_pred CCCCCC-CCCCCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCe---EE
Q psy11937 1 MSWSQP-IAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGV---EH 76 (302)
Q Consensus 1 l~r~~~-~~~~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~---~~ 76 (302)
|++|.+ |. .|+|||||+||+|.|++||||||+++|++.|+++||+||+||.+ ||+|||+||||||+|++.+. +.
T Consensus 58 l~~~~~~~~-~s~GKSGs~F~~T~D~rfiiKti~~~E~~~l~~~lp~Y~~~~~~-n~~SlL~ki~Gly~i~~~~~~~~~~ 135 (342)
T smart00330 58 LCRSPPLEL-SSGGKSGSFFYLSLDDRFIIKTVSKSEIKSLLPMLPNYYEHIVQ-NPNTLLPKFFGLYRVKVKGGTEKKI 135 (342)
T ss_pred hCCCCcccc-CCCCCCCCEEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHHh-CCCcchhhhcEEEEEEECCCcceeE
Confidence 467776 65 89999999999999999999999999999999999999999975 68999999999999998876 89
Q ss_pred EEEEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCC-CceEEeChHHHHHHHHHHhcccccccccc
Q psy11937 77 YVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQG-GTKIVIGDEAKEKLLETLNADVEFLTNLH 155 (302)
Q Consensus 77 ~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~-~~~i~l~~~~~~~l~~qL~~D~~FL~~~~ 155 (302)
|||||+|+|++...|+++||||||+++|.+.+ +..++.+||||+||.+. +.+|+|+++.++.|++||++||+||+++|
T Consensus 136 ~fiVM~NlF~~~~~i~~~yDLKGS~~~R~~~~-~~~~~~~vlkD~df~~~~~~~i~l~~~~k~~l~~ql~~D~~FL~~~~ 214 (342)
T smart00330 136 YFLVMENLFYSDLKVHRKYDLKGSTRGREADK-KKVKELPVLKDLDLVEMWNQPIYVDPLAKKALLKQIKRDCEFLESLK 214 (342)
T ss_pred EEEEEecCCCCCCceeEEEECCCCCCCCCcCc-cccCCCCcccccchhhccCCeEEECHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999998789999999999999999865 44556789999999976 67999999999999999999999999999
Q ss_pred ccccceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcc-cccccccCCCCccCCCCcee
Q psy11937 156 LMDYSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHT-LNRETSLQYDGAIIPELDIY 234 (302)
Q Consensus 156 IMDYSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 234 (302)
|||||||||||..+.+..+.......+. ..........+ ..++|+.... +....+. ......
T Consensus 215 imDYSLLvGi~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~-------~~~~~~ 277 (342)
T smart00330 215 IMDYSLLVGIHDIERGQREEIELPPVYG--SDESPSSESSN--------GGKAPDITGNLLVSNSPD-------GDGPFG 277 (342)
T ss_pred chhhhhhhccccccccchhccccccccc--ccccccccccc--------cCCCcccccccccccccc-------cccccc
Confidence 9999999999988765433221100000 00000000000 0111111110 0000000 000011
Q ss_pred cccCCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937 235 AIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM 301 (302)
Q Consensus 235 ~i~~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if 301 (302)
+++.....+.+++||||||||||+|||+||+||++|++.+++ .+||||||+.|++||++||+++|
T Consensus 278 ~~~~~~~~~~~~vy~iGIID~Lq~Y~~~KklE~~~K~~~~~~--~~iS~V~P~~Y~~RF~~fi~~~F 342 (342)
T smart00330 278 GIPARAIRARRVVLYLGIIDILQTYTWDKKLEHWVKSIGHDG--KTISVVHPEQYAKRFRDFMDKYF 342 (342)
T ss_pred ccccccccCCceEEEEEEEEEEEeCCHhHHHHHHHHHhccCC--CCcceECHHHHHHHHHHHHHhhC
Confidence 111111223467999999999999999999999999998864 35999999999999999999997
No 4
>PF01504 PIP5K: Phosphatidylinositol-4-phosphate 5-Kinase; InterPro: IPR002498 This entry represents a conserved region from the common kinase core found in the type I phosphatidylinositol-4-phosphate 5-kinase (PIP5K) family as described in []. This region is found in I, II and III phosphatidylinositol-4-phosphate 5-kinases (PIP5K enzymes). PIP5K catalyses the formation of phosphoinositol-4,5-bisphosphate via the phosphorylation of phosphatidylinositol-4-phosphate a precursor in the phosphinositide signalling pathway.; GO: 0016307 phosphatidylinositol phosphate kinase activity, 0046488 phosphatidylinositol metabolic process; PDB: 1BO1_A 2GK9_C 2YBX_B.
Probab=100.00 E-value=6.9e-74 Score=525.69 Aligned_cols=247 Identities=36% Similarity=0.609 Sum_probs=162.5
Q ss_pred CCCCCCCCC-CCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEE-EeCC-eEEE
Q psy11937 1 MSWSQPIAV-ESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRL-TVDG-VEHY 77 (302)
Q Consensus 1 l~r~~~~~~-~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i-~~~~-~~~~ 77 (302)
||.+.+|.+ .|+|||||+||+|.|++||||||+++|++.|+++||+||+||.+ ||+|||+||||+|+| ...+ .+.|
T Consensus 3 l~~~~~~~~~~s~GKSGs~F~~T~D~kfiiKti~~~E~~~l~~~lp~Y~~~~~~-~~~SlL~r~~Gl~~i~~~~~~~~~~ 81 (252)
T PF01504_consen 3 LCNLSSLSEKSSGGKSGSFFFFTSDGKFIIKTISKSEFKFLLKILPAYFEHMSE-NPNSLLPRFYGLYSIKKSNGKEKIY 81 (252)
T ss_dssp --------ES---SSSSS-EEE-TTSSEEEEEE-HHHHHHHHHHHHHHHHHHHH-TTTSSS--EEEEEEE-EETT-EEEE
T ss_pred ccccccccccCCCCCccCEEEEeCCCCEEEEeCCHHHHHHHHHHHHHHHHHHHh-CcCchHHHHHHHheecccCCceeEE
Confidence 333333443 99999999999999999999999999999999999999999976 689999999999999 4677 8899
Q ss_pred EEEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhcccccccccccc
Q psy11937 78 VVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLM 157 (302)
Q Consensus 78 fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~IM 157 (302)
||||+|+|+++..|+++||||||+++|.+.+++..+..+||||+||.+...+|+|++++++.|++||++||+||+++|||
T Consensus 82 fvVM~N~f~~~~~i~~~yDLKGs~~~R~~~~~~~~~~~~~lkD~df~~~~~~i~l~~~~~~~l~~ql~~D~~FL~~~~im 161 (252)
T PF01504_consen 82 FVVMENLFYTPRNIHERYDLKGSTVGRKAKKKDREQTEPVLKDLDFIESKRKIHLGPEQKEELLKQLERDTEFLSSHNIM 161 (252)
T ss_dssp EEEEE-SS-SSS--SEEEEE--SSSSS-S-CHHHCSSS-EEEHHHHHHTT--SBS-SCHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEECCCccCCcccceEEecCCcccCCCCCccccccccceeecccccccCcEEEeChHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999998899999999999999999865454567899999999888899999999999999999999999999999
Q ss_pred ccceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcccccccccCCCCccCCCCceeccc
Q psy11937 158 DYSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELDIYAIP 237 (302)
Q Consensus 158 DYSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (302)
|||||||||.......+....... . ...++.
T Consensus 162 DYSLLvGi~~~~~~~~~~~~~~~~-----------~--------------------------------------~~~~~~ 192 (252)
T PF01504_consen 162 DYSLLVGIHNRDSNEEQENKSSFP-----------S--------------------------------------YAGGIM 192 (252)
T ss_dssp S-EEEEEEEH---HHHHHH-H--------------T--------------------------------------TTTTTC
T ss_pred ccceeEeeeecccccccccccccc-----------c--------------------------------------ccccee
Confidence 999999999544332222110000 0 000111
Q ss_pred CCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937 238 SAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM 301 (302)
Q Consensus 238 ~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if 301 (302)
..+.+.+||+|||||||+||++|++||++|++..... .+||||||+.|++||++||+++|
T Consensus 193 ---s~~~~~vy~~GIID~L~~y~~~K~~E~~~K~~~~~~~-~~iS~v~P~~Y~~RF~~~i~~~f 252 (252)
T PF01504_consen 193 ---SEDGNEVYYLGIIDILQEYNWKKKLEHFFKSLIKCDG-QDISCVPPEEYAERFIKFIESIF 252 (252)
T ss_dssp ---CCETTEEEEEEEE-S-EETT-------------------SSS---HHHHHHHHHHHHHHH-
T ss_pred ---ecCCCeEEEEEEehheeeccHHHHHHHHHHHHhhcCC-CCCcccCHHHHHHHHHHHHHHhC
Confidence 1235789999999999999999999999999954432 46999999999999999999987
No 5
>PLN03185 phosphatidylinositol phosphate kinase; Provisional
Probab=100.00 E-value=4.5e-68 Score=542.29 Aligned_cols=291 Identities=30% Similarity=0.467 Sum_probs=211.5
Q ss_pred CCCCCCCCC-CCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeC-CeEEEE
Q psy11937 1 MSWSQPIAV-ESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVD-GVEHYV 78 (302)
Q Consensus 1 l~r~~~~~~-~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~-~~~~~f 78 (302)
|+++.+|.+ .|+|||||+||+|.|++||||||+++|+++|+++||+||+||.. ||+|||+||||||+|++. +.+.||
T Consensus 432 l~~~~~l~el~S~GKSGS~Fy~S~D~rFiIKTI~k~E~~~l~~iLp~Y~~hv~~-n~~TLL~kf~Gl~~i~~~~g~k~~f 510 (765)
T PLN03185 432 ICGNDALRELSSPGKSGSVFFLSQDDRFMIKTLRKSEVKVLLRMLPDYHHHVKT-YENTLITKFFGLHRIKPSSGQKFRF 510 (765)
T ss_pred ccCCccchhccCCCCcCCeEEEecCCcEEEEecCHHHHHHHHHHHHHHHHHHhh-CCCcchhhheEEEEEEeCCCcEEEE
Confidence 466778876 89999999999999999999999999999999999999999864 799999999999999974 678999
Q ss_pred EEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhccccccccccccc
Q psy11937 79 VAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHLMD 158 (302)
Q Consensus 79 vVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~IMD 158 (302)
|||+|+|+++..||++||||||+++|.+...+ .+..+||||+||. .+|+|+++.++.|++||++||+||+++||||
T Consensus 511 vVM~NlF~~~~~I~~~yDLKGSt~~R~~~k~~-~~~~~tlKDlD~~---~~~~l~~~~k~~l~~qL~~D~~FL~~~~IMD 586 (765)
T PLN03185 511 VVMGNMFCTELRIHRRFDLKGSSLGRSADKVE-IDENTTLKDLDLN---YSFYLEPSWRDALLRQIEIDSKFLEAQRIMD 586 (765)
T ss_pred EEEecCCCCCCccceEEECCCCCCCCCCcccc-ccCCCeeeecCcC---ceEeeCHHHHHHHHHHHHHHHHHHhHCcCee
Confidence 99999999988999999999999999985433 3457899999994 5899999999999999999999999999999
Q ss_pred cceeeEEEechhhHHHHHhhcC----CCCC-----CCCCCCCc-cccCCCCC--C-CCCCCCCCCC-Ccc--cc------
Q psy11937 159 YSLLVGIHDCARAEAEELANEN----NGGG-----GGADDEDE-EDSEGVGD--R-IPWGTTPPDS-PHT--LN------ 216 (302)
Q Consensus 159 YSLLvGih~~~~~~~~~~~~~~----~s~~-----~~~~~~~~-~~~~g~~~--~-~~~~~~~~~~-~~~--~~------ 216 (302)
||||||||.......+...... ..+. .++.+++. ...+++-. . ..-.+++|++ ..+ ++
T Consensus 587 YSLLvGIh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (765)
T PLN03185 587 YSLLLGVHFRAPQHLRSLLPYSRSITADGLEVVAEEDTIEDEELSYPEGLVLVPRGADDGSTVPGPHIRGSRLRASAAGD 666 (765)
T ss_pred cceEEEEEecChhhhcccccccccccccccccccccccccccccccccccccccccccccccCCCcccccccccccccCc
Confidence 9999999986543222210000 0000 00000000 00000000 0 0000000000 000 00
Q ss_pred ------------------cccccCCCCccC-CCCceecccCCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCC
Q psy11937 217 ------------------RETSLQYDGAII-PELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGAN 277 (302)
Q Consensus 217 ------------------~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~ 277 (302)
...|........ .+.+.. ..++..+.|||+|||||||+||+.|||||++|++.+++.
T Consensus 667 ~~~~~~~~~~~~~~~~~g~~mpara~~~~~~~~~~~~----~~~e~~d~~~~~giidilq~y~~~k~~eh~~k~~~~~~~ 742 (765)
T PLN03185 667 EEVDLLLPGTARLQIQLGVNMPARAERIPGREDKEKQ----SFHEVYDVVLYLGIIDILQEYNMSKKIEHAYKSLQFDSL 742 (765)
T ss_pred hhhhhccccccccchhhcccCchhhhccccccccccc----ccCcccceEEEEEEEEeecccchhHHHHHHHhhhccCCC
Confidence 000100000000 000000 013456789999999999999999999999999999864
Q ss_pred CCCccccChhhHHHHHHHHHHHhcC
Q psy11937 278 VDGISTCDPEQYGKRFIEFLSKAME 302 (302)
Q Consensus 278 ~~~iS~v~P~~Y~~RF~~f~~~if~ 302 (302)
+||||+|+.|++||++||+++|.
T Consensus 743 --~is~v~p~~y~~rf~~f~~~~f~ 765 (765)
T PLN03185 743 --SISAVDPTFYSKRFLEFIQKVFP 765 (765)
T ss_pred --ceeccChHHHHHHHHHHHHhhcC
Confidence 69999999999999999999984
No 6
>KOG0230|consensus
Probab=100.00 E-value=1.1e-56 Score=469.81 Aligned_cols=221 Identities=29% Similarity=0.468 Sum_probs=198.8
Q ss_pred CCCCCCCCCCCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhc---CCCcccceeeEEEEEEeCC----
Q psy11937 1 MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVER---HGKTLLPQYLGMYRLTVDG---- 73 (302)
Q Consensus 1 l~r~~~~~~~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~---~~~slL~k~~G~~~i~~~~---- 73 (302)
|+||.+|. ++||||||+|+.|.|+|||||.|++.|++.|.+|+|+||+||.+. ..+|.|+||||+|+|.++.
T Consensus 1354 LsRc~~W~-aqGGKSgs~F~KTlDDRFIiKq~sk~EleSFikFAP~YFkYl~~s~~~~~PT~LAKIlGiyqV~vK~~~sg 1432 (1598)
T KOG0230|consen 1354 LSRCVKWE-AQGGKSGSFFAKTLDDRFIIKQMSKTELESFIKFAPAYFKYLTESISQKSPTCLAKILGIYQVSVKSPKSG 1432 (1598)
T ss_pred HhcCcccc-cCCCcccceeeccccchhhhhhccHHHHHHHHhhhHHHHHHHHHHHhcCCcchhhhhheeEEEEEecCCCC
Confidence 79999998 999999999999999999999999999999999999999999864 2469999999999998753
Q ss_pred --eEEEEEEEeeccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCC--ceEEeChHHHHHHHHHHhcccc
Q psy11937 74 --VEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGG--TKIVIGDEAKEKLLETLNADVE 149 (302)
Q Consensus 74 --~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~--~~i~l~~~~~~~l~~qL~~D~~ 149 (302)
.++.++||||||+++ .+.++||||||.++|.+.... +...||.|.||++.. .||+|++..|+.|..+|.+|+.
T Consensus 1433 ke~K~DvmVMENLfY~r-~vsRifDLKGS~RnR~v~~t~--~~d~VLLDeNlVe~~~~sPIfV~~~sK~lL~~aiwNDT~ 1509 (1598)
T KOG0230|consen 1433 KETKMDVMVMENLFYGR-KVSRIFDLKGSLRNRYVPTTS--GADEVLLDENLVEMMWTSPIYVGSHSKRLLRRAIWNDTS 1509 (1598)
T ss_pred ceeEeeeeeehhhhhcc-ccceeeeccchhhhccCCCCC--CCceEEecHHHHhhhhcCCeeehHhHHHHHHHHHhcchH
Confidence 467899999999997 789999999999999986654 345799999999874 5999999999999999999999
Q ss_pred ccccccccccceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcccccccccCCCCccCC
Q psy11937 150 FLTNLHLMDYSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIP 229 (302)
Q Consensus 150 FL~~~~IMDYSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (302)
||++.+||||||||||.+-
T Consensus 1510 FLas~~VMDYSLLVGvD~e------------------------------------------------------------- 1528 (1598)
T KOG0230|consen 1510 FLASINVMDYSLLVGVDDE------------------------------------------------------------- 1528 (1598)
T ss_pred HhhhcccceeeeEEEeeCC-------------------------------------------------------------
Confidence 9999999999999999841
Q ss_pred CCceecccCCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhc-cCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937 230 ELDIYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLK-HGANVDGISTCDPEQYGKRFIEFLSKAM 301 (302)
Q Consensus 230 ~~~~~~i~~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~-~~~~~~~iS~v~P~~Y~~RF~~f~~~if 301 (302)
+..+++|||||+++|||.||||.|+|... .++....+++|.|++|.+||.++|..+|
T Consensus 1529 ---------------~~ELvlGIIDfiRtYTWDKkLESWVK~sGl~gpk~~~PTVVSP~qYK~RFRkAMd~Yf 1586 (1598)
T KOG0230|consen 1529 ---------------NNELVLGIIDFIRTYTWDKKLESWVKSSGLGGPKNKQPTVVSPEQYKTRFRKAMDTYF 1586 (1598)
T ss_pred ---------------CCeEEEEehHhhhhhhhhhhhhhheeccccccCCCCCCceeCHHHHHHHHHHHHhhee
Confidence 12389999999999999999999999873 3333455999999999999999999987
No 7
>COG5253 MSS4 Phosphatidylinositol-4-phosphate 5-kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-53 Score=407.01 Aligned_cols=227 Identities=31% Similarity=0.436 Sum_probs=187.6
Q ss_pred CCCCCCCCCCCCCCccceEEeecCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCC-------
Q psy11937 1 MSWSQPIAVESPGKSGAKFYQSYDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDG------- 73 (302)
Q Consensus 1 l~r~~~~~~~s~GKSGs~F~~T~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~------- 73 (302)
|+||--|. .++||||||||+|.|.|||||||++.|+..|+.++-+||.|+. .||.|+||||||+|+|++..
T Consensus 363 ~sryil~E-~~~GKSGSff~~trD~kfIiKti~hsE~~~~r~~~~eY~~~V~-~np~T~l~ki~G~yrv~~~~s~~~~k~ 440 (612)
T COG5253 363 LSRYILWE-SNGGKSGSFFLFTRDYKFIIKTISHSEHICFRPMIFEYYVHVL-FNPLTLLCKIFGFYRVKSRSSISSSKS 440 (612)
T ss_pred Hhhhheec-cCCCcccceEEEeccchhhhhhhhhhhHHHHHHHHHHHHHHHH-cCchHHHHHHhceeEEecccccccccc
Confidence 47888887 7799999999999999999999999999999999999999986 47999999999999999875
Q ss_pred eEEEEEEEeeccCCCCceeeeEEeeCCccccccCcccccC-CCCccccccccCCCceEEeChHHHHHHHHHHhccccccc
Q psy11937 74 VEHYVVAMRNVFSNHLTTHKKFDLKGSTVDREASEKEKEK-DLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLT 152 (302)
Q Consensus 74 ~~~~fvVM~N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~-~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~ 152 (302)
.++|||||||+|+++. ||++||||||+.+|.+....+.. ..++.+|.+|+....+|..+ ..++.|+.|+++|+.||+
T Consensus 441 ~K~~fiVMeNlf~~~~-i~~ifDLKGS~~Nr~ve~~gk~~s~l~~mndv~wI~es~~~~~g-~~Kk~~~sqv~~Dv~fLs 518 (612)
T COG5253 441 RKIYFIVMENLFYPHG-IHRIFDLKGSMRNRHVERTGKSMSVLLDMNDVEWIRESPKIVFG-LKKKLLLSQVWNDVLFLS 518 (612)
T ss_pred ceeEEEEecccCCCCC-cceEEeccCchhhhhhhhhccccchhccchhHHHHHhCchhhhh-HHHHHHHHHHHHHHHHHH
Confidence 6899999999999985 99999999999999886554432 24567778999876667676 899999999999999999
Q ss_pred cccccccceeeEEEechhhHHHHHhhcCCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCcccccccccCCCCccCCCCc
Q psy11937 153 NLHLMDYSLLVGIHDCARAEAEELANENNGGGGGADDEDEEDSEGVGDRIPWGTTPPDSPHTLNRETSLQYDGAIIPELD 232 (302)
Q Consensus 153 ~~~IMDYSLLvGih~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (302)
++||||||||||||+..... + -|+ + .+
T Consensus 519 klniMDYSllVgi~~~~~~~--------~--------------V~~-------------I------------------~d 545 (612)
T COG5253 519 KLNIMDYSLLVGIDDEREEA--------S--------------VGL-------------I------------------ID 545 (612)
T ss_pred HhCccceeEEEEeccchhhc--------c--------------hHH-------------H------------------Hh
Confidence 99999999999999752100 0 000 0 00
Q ss_pred eecccCCCCCCCceEEEEEEeeeccccchhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhcC
Q psy11937 233 IYAIPSAENAPVKEIYFIALIDVLTHYGVKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAME 302 (302)
Q Consensus 233 ~~~i~~~~~~~~~~vyylGIIDiLq~Y~~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if~ 302 (302)
+ +.+ ...+..+||+||||+|+.|+..| . .+ +|+|+|.+|++||.+||+.++.
T Consensus 546 ~--i~t--~~t~Dk~~~~gI~d~lt~~s~~k-----------~--~~-~t~v~p~~y~nrf~~~~e~yi~ 597 (612)
T COG5253 546 F--IRT--RMTGDKKLESGIKDKLTVGSFTK-----------R--KE-PTAVTPRQYKNRFRKAMEAYID 597 (612)
T ss_pred h--hcc--ccccceeeeeehhhhhccceeee-----------c--cc-ceecCHHHHHHHHHHhHHHhhh
Confidence 0 000 02355679999999999999988 2 23 9999999999999999998863
No 8
>PLN02667 inositol polyphosphate multikinase
Probab=72.87 E-value=12 Score=35.33 Aligned_cols=70 Identities=17% Similarity=0.205 Sum_probs=44.7
Q ss_pred ecCCeEEEEeCC-----HHHHHHHHHHHHH--HHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeeccCCCCceeee
Q psy11937 22 SYDRLFIIKTLT-----SEEVERMHSFLKQ--YHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFSNHLTTHKK 94 (302)
Q Consensus 22 T~D~~fiiKti~-----~~E~~~l~~~l~~--Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f~~~~~i~~~ 94 (302)
+.|+..++|-+. ..|.++-..+..+ --..+ ..++|++||...+.....+ .+|||+|+-++. .--.+
T Consensus 23 ~~~~g~~~Kp~~~~~rg~rE~~FY~~~~~~~~~~~~L-----~~~~P~y~G~~~~~~~~~~-~~i~LeDLt~g~-~~PcV 95 (286)
T PLN02667 23 VDDSGRFYKPLQDDSRGEREAAFYESFSSDTRVPDHI-----RRFFPVFHGTQLVEASDGS-GLLVLEDLLAGY-TKPCV 95 (286)
T ss_pred EcCCCcEEeccCCcccchHHHHHHHHHhccccchHHH-----HhhCcccceeEeeccCCCc-eeEEehHHhcCC-CCCeE
Confidence 457778899998 6888765554311 00111 2588999999877654433 469999996543 11245
Q ss_pred EEee
Q psy11937 95 FDLK 98 (302)
Q Consensus 95 yDLK 98 (302)
=|||
T Consensus 96 lDlK 99 (286)
T PLN02667 96 MDVK 99 (286)
T ss_pred EEEE
Confidence 6777
No 9
>PF12226 Astro_capsid_p: Turkey astrovirus capsid protein; InterPro: IPR022027 This family of proteins is found in viruses. Proteins in this family are typically between 241 and 261 amino acids in length. These proteins are capsid proteins from various astrovirus strains. ; PDB: 3TS3_D.
Probab=68.38 E-value=3.2 Score=36.23 Aligned_cols=24 Identities=29% Similarity=0.570 Sum_probs=18.3
Q ss_pred CCCCCccceEEeecCCeEEEEeCC
Q psy11937 10 ESPGKSGAKFYQSYDRLFIIKTLT 33 (302)
Q Consensus 10 ~s~GKSGs~F~~T~D~~fiiKti~ 33 (302)
-+.|+-+++||.|.|+|||+=.-+
T Consensus 133 Dt~GRRaALFYRtSdEr~ill~St 156 (230)
T PF12226_consen 133 DTTGRRAALFYRTSDERYILLFST 156 (230)
T ss_dssp ETT--EEEEEEETTTTEEEEEEEE
T ss_pred CCCCceEEEEEeccCceEEEEEcc
Confidence 457999999999999999985443
No 10
>PRK10345 hypothetical protein; Provisional
Probab=66.18 E-value=33 Score=30.55 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=43.3
Q ss_pred CCCCccceEEeecCCeEEEEeCCHH---HHH-HHHHHHHHHHHHHHhc-CCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 11 SPGKSGAKFYQSYDRLFIIKTLTSE---EVE-RMHSFLKQYHPYIVER-HGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 11 s~GKSGs~F~~T~D~~fiiKti~~~---E~~-~l~~~l~~Y~~~~~~~-~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
..|..|..|--..|...+||.+... ..+ ...++ .|+..+... ..+.-++++||.+.-..+....+.+||+.
T Consensus 11 G~G~~~~Vy~hp~~~~k~IKv~~~~~~~~~~~~~rEi--~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~ 86 (210)
T PRK10345 11 GTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIRREL--KYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADF 86 (210)
T ss_pred cCCCceEEEECCCCcCeEEEEEeccccchHHHHHHHH--HHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecC
Confidence 3677888887667888899998753 222 22232 255555321 13345999999996654434445567763
No 11
>PHA02988 hypothetical protein; Provisional
Probab=61.45 E-value=31 Score=31.25 Aligned_cols=75 Identities=8% Similarity=0.049 Sum_probs=40.8
Q ss_pred CCCCCccceEEeecCC-eEEEEeCCHHHH--HH-HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQSYDR-LFIIKTLTSEEV--ER-MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T~D~-~fiiKti~~~E~--~~-l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
..+|.+|..+--..++ .++||++++... +. +..+.......-.-+|| -+++++|++.-...+.....+|||.+-
T Consensus 28 i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~--nIv~~~g~~~~~~~~~~~~~lv~Ey~~ 105 (283)
T PHA02988 28 IKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSN--NILKIYGFIIDIVDDLPRLSLILEYCT 105 (283)
T ss_pred EeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCC--CEEEEeeeEEecccCCCceEEEEEeCC
Confidence 3456666555444444 788899975321 11 22222222221111344 589999988543344455678999754
Q ss_pred C
Q psy11937 86 S 86 (302)
Q Consensus 86 ~ 86 (302)
.
T Consensus 106 ~ 106 (283)
T PHA02988 106 R 106 (283)
T ss_pred C
Confidence 3
No 12
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=55.34 E-value=70 Score=27.16 Aligned_cols=74 Identities=12% Similarity=0.029 Sum_probs=40.8
Q ss_pred CCCCCccceEEee-cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeeccC
Q psy11937 10 ESPGKSGAKFYQS-YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFS 86 (302)
Q Consensus 10 ~s~GKSGs~F~~T-~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f~ 86 (302)
.++|.++..|..+ .+++||||.........-..---..++++.+... -.+++++.-... ......+++|+.+-.
T Consensus 5 l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~--pvP~~~~~~~~~-~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 5 LSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGI--PVPRVLAFDTSD-EFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS--BS--EEEEEEET-EETSEEEEEEEEESS
T ss_pred CCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC--CCceEEeecccc-cccccceEEEEEecc
Confidence 4578888666555 5569999999877222222222245577654322 467887533111 111237888988743
No 13
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=51.63 E-value=69 Score=25.95 Aligned_cols=70 Identities=13% Similarity=0.177 Sum_probs=42.1
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
+.|..|..|-... +.+++||...........+.+..-++.+..- .+.-++++++..... ...++||+.+-
T Consensus 2 ~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~----~~~~~~~e~~~ 74 (215)
T cd00180 2 GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKL-NHPNIVKLYGVFEDE----NHLYLVMEYCE 74 (215)
T ss_pred CcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhc-CCCCeeeEeeeeecC----CeEEEEEecCC
Confidence 4677788877765 4789999999776532222333333333221 224566666666433 56678888763
No 14
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=44.46 E-value=81 Score=28.04 Aligned_cols=69 Identities=19% Similarity=0.238 Sum_probs=40.4
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
+.|..|+.|--. ....++||.+...+.....+.+..-..-+.. -.+.-+++++|.+.- ...+++||+.+
T Consensus 13 g~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~----~~~~~lv~e~~ 84 (277)
T cd06641 13 GKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ-CDSPYVTKYYGSYLK----DTKLWIIMEYL 84 (277)
T ss_pred eecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHh-cCCCCEeEEEEEEEe----CCeEEEEEEeC
Confidence 457777777543 3457999998755443332323322232222 234468899998742 24578999975
No 15
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=44.14 E-value=99 Score=27.46 Aligned_cols=72 Identities=14% Similarity=0.192 Sum_probs=39.8
Q ss_pred CCCCCccceEEee-------cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 10 ESPGKSGAKFYQS-------YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 10 ~s~GKSGs~F~~T-------~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
-..|..|++|.-. ....++||.+..........+.... +-+.. -.+.-+++++|++.. .+...+++||+
T Consensus 12 lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~-~~l~~-l~h~~iv~~~~~~~~--~~~~~~~lv~e 87 (284)
T cd05081 12 LGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREI-EILKS-LQHDNIVKYKGVCYS--AGRRNLRLVME 87 (284)
T ss_pred ccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHH-HHHHh-CCCCCeeEEEEEEcc--CCCCceEEEEE
Confidence 4567777776544 2457999998754333332222221 22222 123348889887633 23345788999
Q ss_pred ecc
Q psy11937 83 NVF 85 (302)
Q Consensus 83 N~f 85 (302)
.+-
T Consensus 88 ~~~ 90 (284)
T cd05081 88 YLP 90 (284)
T ss_pred ecC
Confidence 763
No 16
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=43.11 E-value=92 Score=27.88 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=40.2
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.+.|..|..|... .+..+++|.+..........-+..-.+-+.. -.+.-+++++|.|... .....++||+.+-
T Consensus 9 lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~-l~h~~iv~~~~~~~~~--~~~~~~lv~e~~~ 84 (287)
T cd06621 9 LGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKS-CKSPYIVKYYGAFLDE--SSSSIGIAMEYCE 84 (287)
T ss_pred eccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHh-CCCCCeeeeeeEEEcc--CCCeEEEEEEecC
Confidence 3467777665444 3577999998754332211111112233322 1234589999988432 2345679999763
No 17
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=42.76 E-value=20 Score=25.17 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=13.3
Q ss_pred ccceEEeecCCeEEE
Q psy11937 15 SGAKFYQSYDRLFII 29 (302)
Q Consensus 15 SGs~F~~T~D~~fii 29 (302)
.|-.||.+.|++|+|
T Consensus 32 ~~~i~Y~~~dg~yli 46 (57)
T PF10411_consen 32 GGGILYVDEDGRYLI 46 (57)
T ss_dssp TTEEEEEETTSSEEE
T ss_pred CCeEEEEcCCCCEEE
Confidence 467999999999997
No 18
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=38.17 E-value=1.6e+02 Score=25.01 Aligned_cols=69 Identities=14% Similarity=0.206 Sum_probs=42.1
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
..|..|..|-... ...+++|.+.....+....+...+-.. ..- .+.-+++++|.+.-. ..+++||+.+-
T Consensus 9 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l-~~l-~~~~i~~~~~~~~~~----~~~~l~~e~~~ 80 (253)
T cd05122 9 GKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQIL-KKC-KHPNIVKYYGSYLKK----DELWIVMEFCS 80 (253)
T ss_pred ccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHH-HhC-CCCCEeEEEEEEecC----CeEEEEEecCC
Confidence 4566777776653 467999999876554444444444332 222 234577888876433 55678888753
No 19
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=37.78 E-value=1.2e+02 Score=26.20 Aligned_cols=69 Identities=17% Similarity=0.216 Sum_probs=38.9
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
+.|..|..+... .+..++||.+..........+.........-+| .-+++++|.+.- ....++||+.+-
T Consensus 12 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h--~~i~~~~~~~~~----~~~~~l~~e~~~ 83 (262)
T cd06613 12 GSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRH--PNIVAYFGSYLR----RDKLWIVMEYCG 83 (262)
T ss_pred cCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCC--CChhceEEEEEe----CCEEEEEEeCCC
Confidence 456666665443 346799999875443333333333222211123 458889998732 235678999653
No 20
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=37.64 E-value=1.8e+02 Score=25.32 Aligned_cols=73 Identities=14% Similarity=0.137 Sum_probs=41.1
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEe--CCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTV--DGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~--~~~~~~fvVM~N~f 85 (302)
..|..|..|--.. +..+++|.++..+... +-+..-..-+..-..+.-+++++|++.-.. .....+++||+.+-
T Consensus 15 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~--~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~ 92 (275)
T cd06608 15 GEGTYGKVYKARHKKTGQLVAIKIMDIIEDEE--EEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCG 92 (275)
T ss_pred cCCCCeEEEEEEECCCCcEEEEEEEecCchhH--HHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCC
Confidence 3566676665442 3579999987543321 112222222221112456899999886554 23566789999754
No 21
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=37.48 E-value=87 Score=28.57 Aligned_cols=58 Identities=12% Similarity=0.132 Sum_probs=35.1
Q ss_pred CeEEEEeCC---------------HHHHHHHHHHHHHHHHHHHhc-CCCcccceeeEEEEEEeCCeEEEEEEEeeccC
Q psy11937 25 RLFIIKTLT---------------SEEVERMHSFLKQYHPYIVER-HGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFS 86 (302)
Q Consensus 25 ~~fiiKti~---------------~~E~~~l~~~l~~Y~~~~~~~-~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f~ 86 (302)
..+|||+.+ ..|..+-.+++|.+-....+. ......++.|+.. ......+||||||=.
T Consensus 27 ~s~ivK~~p~~~~~~~~~~~~~~f~~E~~fY~~~~p~l~~~~~~~~~~~~~~P~~~~~~----~~~~~~~lvlEDL~~ 100 (294)
T PF02958_consen 27 LSLIVKSPPTNPSRREFLREMGSFRREIFFYRELLPELEELQKEAGDPFKFFPKCYYAD----EDPGDEVLVLEDLSE 100 (294)
T ss_pred EEEEEEeCCCchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccccceeeceEEEec----cCCCceeeehhhhhh
Confidence 468899987 245555566778777765332 1223556665544 122257999999954
No 22
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=36.95 E-value=2.1e+02 Score=24.80 Aligned_cols=71 Identities=11% Similarity=0.170 Sum_probs=40.6
Q ss_pred CCCCCccceEEeec---CCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 10 ESPGKSGAKFYQSY---DRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 10 ~s~GKSGs~F~~T~---D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
...|..|..|--+. ...++||++++.+.. ....+....-. +.....+.-++++++++. .....++||+.
T Consensus 4 l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~i~~~~~~~~----~~~~~~lv~e~ 78 (260)
T cd05611 4 ISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAI-MMIQGESPYVAKLYYSFQ----SKDYLYLVMEY 78 (260)
T ss_pred CCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHH-HhhcCCCCCeeeeeeeEE----cCCeEEEEEec
Confidence 34677887776553 357999999865432 22222222211 111123345888988874 23467889986
Q ss_pred cc
Q psy11937 84 VF 85 (302)
Q Consensus 84 ~f 85 (302)
+-
T Consensus 79 ~~ 80 (260)
T cd05611 79 LN 80 (260)
T ss_pred cC
Confidence 53
No 23
>PF06296 DUF1044: Protein of unknown function (DUF1044); InterPro: IPR009387 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=34.99 E-value=78 Score=26.00 Aligned_cols=46 Identities=26% Similarity=0.525 Sum_probs=31.9
Q ss_pred CCCCCCCCCccc----eEEeecCCeEEE--------EeCCHHHHHHHHHHHHHHHHHH
Q psy11937 6 PIAVESPGKSGA----KFYQSYDRLFII--------KTLTSEEVERMHSFLKQYHPYI 51 (302)
Q Consensus 6 ~~~~~s~GKSGs----~F~~T~D~~fii--------Kti~~~E~~~l~~~l~~Y~~~~ 51 (302)
+|....-||||. .||...+.-|.+ -.|+..|.+.|+++...+.++-
T Consensus 47 Ria~~g~GKsGG~R~I~~~~~~~~~~~l~~y~K~~~~nis~~El~~lk~la~~l~~~~ 104 (120)
T PF06296_consen 47 RIARKGKGKSGGYRVIYFFKQEDRIFFLYIYAKNEKANISDKELKALKKLAKELLNLS 104 (120)
T ss_pred EeccCCCCCCCceEEEEEEEeCCEEEEEEEEcccccCCCCHHHHHHHHHHHHHHHHhC
Confidence 344456799996 344445544544 2467899999999999988864
No 24
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=33.92 E-value=1.6e+02 Score=25.67 Aligned_cols=68 Identities=19% Similarity=0.321 Sum_probs=38.9
Q ss_pred CCCCccceE---EeecC---CeEEEEeCCHHHHHHH-HHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 11 SPGKSGAKF---YQSYD---RLFIIKTLTSEEVERM-HSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 11 s~GKSGs~F---~~T~D---~~fiiKti~~~E~~~l-~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
..|..|..+ +...+ ..++||.+...+.... ..+.... +-+.. -.+.-+++++|.+. + ..+++||+.
T Consensus 4 g~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~-~~l~~-l~h~~iv~~~~~~~----~-~~~~~v~e~ 76 (257)
T cd05060 4 GHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREA-SVMAQ-LDHPCIVRLIGVCK----G-EPLMLVMEL 76 (257)
T ss_pred CccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHH-HHHHh-cCCCCeeeEEEEEc----C-CceEEEEEe
Confidence 457778776 44455 6899999987665322 2233322 22221 12335788888652 2 235788886
Q ss_pred cc
Q psy11937 84 VF 85 (302)
Q Consensus 84 ~f 85 (302)
+-
T Consensus 77 ~~ 78 (257)
T cd05060 77 AP 78 (257)
T ss_pred CC
Confidence 54
No 25
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=32.38 E-value=1.5e+02 Score=27.70 Aligned_cols=68 Identities=10% Similarity=0.201 Sum_probs=36.7
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHH-HHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERM-HSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l-~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..|.-.. ...++||.+........ ..+... .+-+.. -.+.-+++++|++.. ....++||+.+
T Consensus 83 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E-~~~l~~-l~h~~iv~~~~~~~~----~~~~~lv~e~~ 154 (353)
T PLN00034 83 GSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICRE-IEILRD-VNHPNVVKCHDMFDH----NGEIQVLLEFM 154 (353)
T ss_pred cCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHH-HHHHHh-CCCCCcceeeeEecc----CCeEEEEEecC
Confidence 4566777776543 46899999854322111 122222 111211 123358888888732 34567889875
No 26
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=32.34 E-value=2e+02 Score=26.44 Aligned_cols=67 Identities=15% Similarity=0.235 Sum_probs=37.2
Q ss_pred CCCccceEEee---cCCeEEEEeCCHHHH---HHHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 12 PGKSGAKFYQS---YDRLFIIKTLTSEEV---ERMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 12 ~GKSGs~F~~T---~D~~fiiKti~~~E~---~~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
.|..|..+... ....++||.+.++.. ..+..+.... .-+.. +|| .++++++++.. ....++||+.+
T Consensus 5 ~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~-~~l~~l~hp--~i~~~~~~~~~----~~~~~lv~E~~ 77 (323)
T cd05595 5 KGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTES-RVLQNTRHP--FLTALKYAFQT----HDRLCFVMEYA 77 (323)
T ss_pred eCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHH-HHHHhCCCC--CCcceeeEEec----CCEEEEEEeCC
Confidence 56667666543 345789999976432 1122222221 11211 244 58888888743 24578999976
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 78 ~ 78 (323)
T cd05595 78 N 78 (323)
T ss_pred C
Confidence 3
No 27
>KOG4620|consensus
Probab=32.30 E-value=57 Score=24.47 Aligned_cols=35 Identities=17% Similarity=0.377 Sum_probs=26.6
Q ss_pred hhHHHHHHHHHhccCCCCCCccccChhhHHHHHHHHHHHhc
Q psy11937 261 VKKQAAKAAKTLKHGANVDGISTCDPEQYGKRFIEFLSKAM 301 (302)
Q Consensus 261 ~~KklE~~~Ks~~~~~~~~~iS~v~P~~Y~~RF~~f~~~if 301 (302)
+.+++=|++..++.-.. -.|++|+.||++|+..-|
T Consensus 7 LQrqVlhlYR~~lraa~------~Kp~~~~~~~m~fvh~EF 41 (80)
T KOG4620|consen 7 LQRQVLHLYRDLLRAAR------GKPGAEARRWMAFVHAEF 41 (80)
T ss_pred HHHHHHHHHHHHHHHhc------CCCchHHHHHHHHHHHHH
Confidence 56777788887765432 379999999999998654
No 28
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=31.08 E-value=2.2e+02 Score=26.31 Aligned_cols=70 Identities=10% Similarity=0.095 Sum_probs=40.0
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
..|..|..+-... ...+++|.+..+......+-+....+.+.+- .+.-+++++|++.- ....++||+.+-
T Consensus 14 g~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l-~h~~iv~~~~~~~~----~~~~~lv~e~~~ 86 (331)
T cd06649 14 GAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC-NSPYIVGFYGAFYS----DGEISICMEHMD 86 (331)
T ss_pred cCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHC-CCCCCCeEEEEEEE----CCEEEEEeecCC
Confidence 4577777665443 3457888886432222333333344444332 24469999998743 235678999753
No 29
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=30.69 E-value=2e+02 Score=24.89 Aligned_cols=68 Identities=16% Similarity=0.177 Sum_probs=39.6
Q ss_pred CCCCccceEEeec---CC---eEEEEeCCHHHHH-HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 11 SPGKSGAKFYQSY---DR---LFIIKTLTSEEVE-RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~---~fiiKti~~~E~~-~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
+.|..|..|--.. .+ .+.||.++..... ....+.... +-+.. -.+.-+++++|.+.- ...++||+.
T Consensus 4 g~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~-~~l~~-l~h~~iv~~~~~~~~-----~~~~~v~e~ 76 (257)
T cd05040 4 GDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEA-AIMHS-LDHENLIRLYGVVLT-----HPLMMVTEL 76 (257)
T ss_pred CccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHH-HHHhh-cCCCCccceeEEEcC-----CeEEEEEEe
Confidence 4566676664432 22 4899999987663 333333332 22222 223458888887642 567889997
Q ss_pred cc
Q psy11937 84 VF 85 (302)
Q Consensus 84 ~f 85 (302)
+-
T Consensus 77 ~~ 78 (257)
T cd05040 77 AP 78 (257)
T ss_pred cC
Confidence 64
No 30
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=30.22 E-value=2.1e+02 Score=25.26 Aligned_cols=69 Identities=12% Similarity=0.110 Sum_probs=40.6
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
..|..|..|-... ...+++|.++..+......+.... ..+..- .+..+++++|.+.- ....++||+.+-
T Consensus 14 ~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~-~~l~~l-~h~~i~~~~~~~~~----~~~~~lv~e~~~ 85 (280)
T cd06611 14 GDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEI-DILSEC-KHPNIVGLYEAYFY----ENKLWILIEFCD 85 (280)
T ss_pred cCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHH-HHHHhC-CCCceeEEEEEEec----CCeEEEEeeccC
Confidence 4566677766553 567899998754444333333332 222221 24569999998742 345688999653
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=30.04 E-value=2.3e+02 Score=26.11 Aligned_cols=69 Identities=12% Similarity=0.209 Sum_probs=39.4
Q ss_pred CCCccceEEeec---CCeEEEEeCCHHHHHH---HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 12 PGKSGAKFYQSY---DRLFIIKTLTSEEVER---MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 12 ~GKSGs~F~~T~---D~~fiiKti~~~E~~~---l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.|..|..|--.. ...++||.+.+.+... ...+... ..-+.. -.+--++++++.+.- ....++||+.+-
T Consensus 28 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E-~~~l~~-l~hp~iv~~~~~~~~----~~~~~lv~e~~~ 101 (329)
T PTZ00263 28 TGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQE-KSILME-LSHPFIVNMMCSFQD----ENRVYFLLEFVV 101 (329)
T ss_pred ecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHH-HHHHHh-CCCCCCCcEEEEEEc----CCEEEEEEcCCC
Confidence 466777765543 4569999998766432 1222222 122222 123358889887742 345688999764
Q ss_pred C
Q psy11937 86 S 86 (302)
Q Consensus 86 ~ 86 (302)
.
T Consensus 102 ~ 102 (329)
T PTZ00263 102 G 102 (329)
T ss_pred C
Confidence 3
No 32
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=29.76 E-value=1.2e+02 Score=27.54 Aligned_cols=114 Identities=9% Similarity=0.127 Sum_probs=60.1
Q ss_pred CCCCCccceEEee-----cCCeEEEEeCCHHHHH--HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 10 ESPGKSGAKFYQS-----YDRLFIIKTLTSEEVE--RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 10 ~s~GKSGs~F~~T-----~D~~fiiKti~~~E~~--~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
-..|..|..+--. .+..+.||.+...+.. ...++ .....+ +|| -+++++++|.- ......++||+
T Consensus 9 lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~--~~l~~l--~h~--niv~~~~~~~~--~~~~~~~lv~e 80 (317)
T cd07868 9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREI--ALLREL--KHP--NVISLQKVFLS--HADRKVWLLFD 80 (317)
T ss_pred cccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHH--HHHHhc--CCC--CCcceeeeEec--CCCcEEEEEEe
Confidence 3467778777654 2356999998753221 11111 122233 244 47788887742 22345678888
Q ss_pred eccCCCCceeeeEEeeCCccccccCcccccCCCCccccccccCCCceEEeChHHHHHHHHHHhccccccccccc
Q psy11937 83 NVFSNHLTTHKKFDLKGSTVDREASEKEKEKDLPTFKDNDFVQGGTKIVIGDEAKEKLLETLNADVEFLTNLHL 156 (302)
Q Consensus 83 N~f~~~~~i~~~yDLKGS~~~R~~~~~~~~~~~~vlkD~df~~~~~~i~l~~~~~~~l~~qL~~D~~FL~~~~I 156 (302)
..-.. ....... .+... . ...+..++......+..||-.=.+||.+.||
T Consensus 81 ~~~~~---l~~~~~~-----~~~~~------------~-----~~~~~~l~~~~~~~i~~qi~~al~~LH~~~i 129 (317)
T cd07868 81 YAEHD---LWHIIKF-----HRASK------------A-----NKKPVQLPRGMVKSLLYQILDGIHYLHANWV 129 (317)
T ss_pred ccCCC---HHHHHHh-----ccccc------------c-----cCCcccCCHHHHHHHHHHHHHHHHHHHhCCE
Confidence 64221 1000000 00000 0 0012335666777888888888889988885
No 33
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=29.15 E-value=3.1e+02 Score=25.75 Aligned_cols=69 Identities=13% Similarity=0.176 Sum_probs=38.9
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHH--HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVER--MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~--l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..+... ....+.||.+.+.+... ..+.+..-.+-+.. -.+..++++++.|. ....+++||+.+
T Consensus 10 G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~-l~hp~iv~~~~~~~----~~~~~~lv~E~~ 83 (377)
T cd05629 10 GKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAE-SDSPWVVSLYYSFQ----DAQYLYLIMEFL 83 (377)
T ss_pred eecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHh-CCCCCcceEEEEEE----cCCeeEEEEeCC
Confidence 356667666432 45679999998755311 11111111222222 23446899998874 334678999986
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=28.34 E-value=2.9e+02 Score=25.40 Aligned_cols=69 Identities=16% Similarity=0.186 Sum_probs=40.2
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHH---HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVER---MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~---l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|.-|..|--.. ...++||.+++..... ...++... ..+.. ..+.-++++++.+.- ....++||+.+
T Consensus 10 g~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~-~~l~~-~~h~~iv~~~~~~~~----~~~~~lv~e~~ 83 (333)
T cd05600 10 GQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTER-DILTT-TKSEWLVKLLYAFQD----DEYLYLAMEYV 83 (333)
T ss_pred eecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHH-HHHHh-CCCCCCccEEEEEEc----CCEEEEEEeCC
Confidence 3566676665442 4578999998765432 22333322 22322 224568898887742 34568999975
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 84 ~ 84 (333)
T cd05600 84 P 84 (333)
T ss_pred C
Confidence 3
No 35
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=27.98 E-value=2.4e+02 Score=24.58 Aligned_cols=68 Identities=18% Similarity=0.198 Sum_probs=37.9
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..|--. ....++||.++..+......+. ....-+.. -.+.-+++++|.+.. ...+++||+.+
T Consensus 18 g~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~-~e~~~~~~-l~h~~ii~~~~~~~~----~~~~~lv~e~~ 88 (267)
T cd06645 18 GSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQ-QEIIMMKD-CKHSNIVAYFGSYLR----RDKLWICMEFC 88 (267)
T ss_pred CCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHH-HHHHHHHh-CCCCCeeeEEEEEEe----CCEEEEEEecc
Confidence 345666655433 4678999998754333322222 22222322 234568888887643 24567899864
No 36
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=27.88 E-value=1.7e+02 Score=25.22 Aligned_cols=68 Identities=12% Similarity=0.269 Sum_probs=37.2
Q ss_pred CCCccceEEeec---CCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 12 PGKSGAKFYQSY---DRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 12 ~GKSGs~F~~T~---D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.|.+|..+-... ...++||.+...+.. ....+... .+-+..- .+.-++++++.+. .....++||+.+-
T Consensus 3 ~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e-~~~l~~~-~h~~i~~~~~~~~----~~~~~~lv~e~~~ 76 (265)
T cd05579 3 KGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTE-RDILSQA-QSPYVVKLYYSFQ----GKKNLYLVMEYLP 76 (265)
T ss_pred CCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHH-HHHHHhC-CCcchhHHHHhee----cCcEEEEEEecCC
Confidence 455565554443 467999999876552 22222222 2222221 1334777777763 3455678998764
No 37
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=27.80 E-value=2.6e+02 Score=25.97 Aligned_cols=69 Identities=10% Similarity=0.133 Sum_probs=39.6
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHH--HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVE--RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~--~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|.+|.-.. ...++||.+.+.+.. .....+..-..-+..- .+.-++++++.|.- ...+++||+.+
T Consensus 10 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l-~h~~iv~~~~~~~~----~~~~~lv~E~~ 83 (364)
T cd05599 10 GRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEA-DNPWVVKLYYSFQD----ENYLYLIMEYL 83 (364)
T ss_pred EecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC-CCCCCcceEEEEEc----CCeEEEEECCC
Confidence 4566677665432 456999999875431 1112222222333222 24568999988753 35678999965
No 38
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=27.71 E-value=2.6e+02 Score=24.20 Aligned_cols=69 Identities=12% Similarity=0.163 Sum_probs=38.5
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHH-HHHHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEE-VERMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E-~~~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
-..|..|..|... .+.++++|.+.... ......+...+.. +.. +|| -++++++.+.- ....++||+++
T Consensus 8 lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~-l~~l~h~--~i~~~~~~~~~----~~~~~lv~e~~ 80 (255)
T cd08219 8 VGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVL-LAKMKHP--NIVAFKESFEA----DGHLYIVMEYC 80 (255)
T ss_pred eeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHH-HHhCCCC--CcceEEEEEEE----CCEEEEEEeeC
Confidence 3467778777664 57899999875321 1111222222211 111 244 47888887742 24567899976
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 81 ~ 81 (255)
T cd08219 81 D 81 (255)
T ss_pred C
Confidence 4
No 39
>KOG0581|consensus
Probab=27.66 E-value=1.7e+02 Score=28.62 Aligned_cols=71 Identities=10% Similarity=0.221 Sum_probs=43.8
Q ss_pred CCCCCccceEEee---cCCeEEEEeC----CHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTL----TSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti----~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
-..|.+|+.+=.- ...=|.+|+| ..+-.+.+.+-|.-+.. . .+..+++|||+|... +. ...|+||
T Consensus 87 lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~----~-~spyIV~~ygaF~~~--~~-~isI~mE 158 (364)
T KOG0581|consen 87 LGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRS----C-QSPYIVGFYGAFYSN--GE-EISICME 158 (364)
T ss_pred cccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhh----C-CCCCeeeEeEEEEeC--Cc-eEEeehh
Confidence 3467777765433 3456889999 33333444444443333 2 345799999999553 33 5678999
Q ss_pred eccCCC
Q psy11937 83 NVFSNH 88 (302)
Q Consensus 83 N~f~~~ 88 (302)
.+=.+.
T Consensus 159 YMDgGS 164 (364)
T KOG0581|consen 159 YMDGGS 164 (364)
T ss_pred hcCCCC
Confidence 986543
No 40
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=27.38 E-value=3e+02 Score=25.12 Aligned_cols=70 Identities=13% Similarity=0.225 Sum_probs=37.3
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..|--.. +..+.||.+++.... ....+... ..-+.....+..++++++++.- ...+++||+.+
T Consensus 4 G~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e-~~il~~~~~hp~i~~~~~~~~~----~~~~~lv~E~~ 78 (321)
T cd05591 4 GKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTE-KRILALAAKHPFLTALHCCFQT----KDRLFFVMEYV 78 (321)
T ss_pred ccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHH-HHHHHhccCCCCccceeeEEEc----CCeEEEEEeCC
Confidence 3566676664432 347999999864221 11111111 1111111123468999988842 34578999975
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 79 ~ 79 (321)
T cd05591 79 N 79 (321)
T ss_pred C
Confidence 3
No 41
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=27.01 E-value=2.1e+02 Score=25.31 Aligned_cols=64 Identities=13% Similarity=0.136 Sum_probs=39.4
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..+.... ...+++|.++......... ...-+..++| -++++++.+... ..+++||+.+
T Consensus 25 g~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~e~----~~~~~~~~h~--~iv~~~~~~~~~----~~~~iv~e~~ 91 (267)
T PHA03390 25 IDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAIEP----MVHQLMKDNP--NFIKLYYSVTTL----KGHVLIMDYI 91 (267)
T ss_pred cCCCceEEEEEEEcCCCcEEEEEEEehhhcchhhH----HHHHHhhcCC--CEEEEEEEEecC----CeeEEEEEcC
Confidence 6777888876653 3569999988764432211 1111222344 588888888543 3678999964
No 42
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=26.75 E-value=2.3e+02 Score=28.08 Aligned_cols=69 Identities=6% Similarity=-0.001 Sum_probs=36.8
Q ss_pred CCCccceEEeec----CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeeccC
Q psy11937 12 PGKSGAKFYQSY----DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFS 86 (302)
Q Consensus 12 ~GKSGs~F~~T~----D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f~ 86 (302)
.|..|..|.-.. +.+.++|.+...+......+. .-..-+.. -.+.-+++++|.+.- ...+++||+.+-.
T Consensus 77 ~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~-~E~~~l~~-l~Hpniv~~~~~~~~----~~~~~lv~E~~~g 149 (478)
T PTZ00267 77 RNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYAR-SELHCLAA-CDHFGIVKHFDDFKS----DDKLLLIMEYGSG 149 (478)
T ss_pred eCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHH-HHHHHHHh-CCCCCEeEEEEEEEE----CCEEEEEEECCCC
Confidence 366676665432 456888876432222211111 11222222 223348999998743 2467899998743
No 43
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=26.32 E-value=3.5e+02 Score=24.93 Aligned_cols=69 Identities=10% Similarity=0.145 Sum_probs=39.7
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHH--HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVER--MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~--l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|.-|..+-.. .+..+.||.+.+.+... -.+.+..-...+.. ..+..+++++++|.- ....++||+.+
T Consensus 10 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~-~~~~~i~~~~~~~~~----~~~~~lv~e~~ 83 (331)
T cd05597 10 GRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN-GDRRWITNLHYAFQD----ENNLYLVMDYY 83 (331)
T ss_pred EecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHh-CCCCCCCceEEEEec----CCeEEEEEecC
Confidence 456667666544 35679999998754321 12223332333322 223468888888742 34578999975
No 44
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=26.09 E-value=2.1e+02 Score=25.16 Aligned_cols=68 Identities=13% Similarity=0.105 Sum_probs=40.3
Q ss_pred CCCCCccceEEeecC--CeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQSYD--RLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T~D--~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.++|.|++.-|.... ++++||.-+..+...+.+-+ ...+++.+. -..+++++..... ...++||+-+=
T Consensus 6 ~~~g~~~~~v~~~~~~~~~~~vk~~~~~~~~~~~~E~-~~l~~l~~~---~~vP~v~~~~~~~----~~~~lv~e~i~ 75 (244)
T cd05150 6 VTEGQSGATVYRLDGKNPGLYLKIAPSGPTYELEREA-ERLRWLAGK---LPVPEVIDYGSDD----GRAWLLTSAVP 75 (244)
T ss_pred cCCCCCcCeEEEEcCCCCcEEEEecCCCcccchHHHH-HHHHHHHhc---CCCCeEEEEEecC----CccEEEEEeeC
Confidence 668999888777655 49999998864311111111 122333221 3467888766432 34688999874
No 45
>KOG0610|consensus
Probab=24.99 E-value=2.7e+02 Score=27.93 Aligned_cols=71 Identities=14% Similarity=0.224 Sum_probs=49.4
Q ss_pred CCCccceEEeecCC---eEEEEeCCHHHHHHHHHHHHHHHHH-HHhcCCCcccceeeEEEEEEeCCeEEEEEEEeeccC
Q psy11937 12 PGKSGAKFYQSYDR---LFIIKTLTSEEVERMHSFLKQYHPY-IVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVFS 86 (302)
Q Consensus 12 ~GKSGs~F~~T~D~---~fiiKti~~~E~~~l~~~l~~Y~~~-~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f~ 86 (302)
.|--|++|..=..+ -|.+|.|.++++..=.++...=.+- |.+...+-+|+..|+.|. ..+...+||+..=.
T Consensus 87 ~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fe----t~~~~cl~meyCpG 161 (459)
T KOG0610|consen 87 CGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFE----TDKYSCLVMEYCPG 161 (459)
T ss_pred CCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheee----ccceeEEEEecCCC
Confidence 46678888876554 5999999999998765555444332 223345569999998773 44677899998644
No 46
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=24.92 E-value=3.1e+02 Score=25.06 Aligned_cols=69 Identities=12% Similarity=0.175 Sum_probs=39.5
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHH--HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVE--RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~--~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..+-.. .+..++||.+++.... .-.+.+..-..-+.. ..+..++++++++.- ....++||+.+
T Consensus 10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~-~~~~~i~~~~~~~~~----~~~~~lv~e~~ 83 (330)
T cd05601 10 GRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSI-SNSPWIPQLQYAFQD----KDNLYLVMEYQ 83 (330)
T ss_pred EeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHh-CCCCCCcceeeEEec----CCeEEEEECCC
Confidence 456667666432 4567999999876541 122233333333322 234568888877642 34578899975
No 47
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=24.49 E-value=2.3e+02 Score=25.55 Aligned_cols=70 Identities=17% Similarity=0.312 Sum_probs=39.9
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..|-... +..++||.+.+.+.. ....+...+-. +..- .+.-+++++|.+.- ....++||+.+
T Consensus 10 g~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~-l~~l-~~~~i~~~~~~~~~----~~~~~lv~e~~ 83 (316)
T cd05574 10 GKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEI-LATL-DHPFLPTLYASFQT----ETYLCLVMDYC 83 (316)
T ss_pred cCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHH-HHhC-CCCCchhheeeeec----CCEEEEEEEec
Confidence 4566676665443 568999999865433 22233333322 2111 23358888888732 34568899976
Q ss_pred cC
Q psy11937 85 FS 86 (302)
Q Consensus 85 f~ 86 (302)
-.
T Consensus 84 ~~ 85 (316)
T cd05574 84 PG 85 (316)
T ss_pred CC
Confidence 43
No 48
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=23.98 E-value=4.5e+02 Score=22.55 Aligned_cols=69 Identities=12% Similarity=0.172 Sum_probs=37.1
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHH--HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEV--ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~--~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
..|..|..+... .+..++||.++..+. .....+...+ .-+.. -.+.-++++++.+. .....++||+.+-
T Consensus 9 g~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~-~~l~~-l~~~~i~~~~~~~~----~~~~~~lv~e~~~ 82 (256)
T cd08218 9 GEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEV-AVLSN-MKHPNIVQYQESFE----ENGNLYIVMDYCE 82 (256)
T ss_pred ccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHH-HHHHh-CCCCCeeeeEeeec----CCCeEEEEEecCC
Confidence 356667666544 356799998865322 1112222222 22222 12234788888763 3346688999764
No 49
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=23.97 E-value=3.8e+02 Score=24.47 Aligned_cols=70 Identities=9% Similarity=0.196 Sum_probs=38.5
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHH---HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVER---MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~---l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..|--.. ...++||.+.+..... ...++......+ ++-.+.-++++++.+.- ....++||+.+
T Consensus 4 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~-~~l~hp~iv~~~~~~~~----~~~~~lv~e~~ 78 (323)
T cd05575 4 GKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLL-KNVKHPFLVGLHYSFQT----ADKLYFVLDYV 78 (323)
T ss_pred eeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHH-hhCCCCCCCCeeEEEEe----CCEEEEEEcCC
Confidence 3566676664432 3568999998654321 223333322222 22223457888877742 34568899975
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 79 ~ 79 (323)
T cd05575 79 N 79 (323)
T ss_pred C
Confidence 4
No 50
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=23.78 E-value=3.2e+02 Score=23.97 Aligned_cols=53 Identities=13% Similarity=0.138 Sum_probs=30.1
Q ss_pred eEEEEeCCHHHHHHHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 26 LFIIKTLTSEEVERMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 26 ~fiiKti~~~E~~~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
+.+||.+...+......+... ...+.. +|| -+++++|.+. .....++||+.+-
T Consensus 34 ~v~~k~~~~~~~~~~~~~~~~-~~~l~~l~hp--~iv~~~~~~~----~~~~~~lv~e~~~ 87 (262)
T cd05077 34 KVILKVLDPSHRDISLAFFET-ASMMRQVSHK--HIVLLYGVCV----RDVENIMVEEFVE 87 (262)
T ss_pred eEEEeecChhhhhHHHHHHHH-HHHHHhCCCC--CEeeEEEEEe----cCCCCEEEEeccc
Confidence 588999876554433333222 222222 345 4888888753 2245678998754
No 51
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=23.59 E-value=3.4e+02 Score=23.91 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=39.6
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHHHH-HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEVER-MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~~~-l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
-+.|..|..|.-+ .+..++||.+...+... ...+... ..=+.. -.+..+++++|.+.- ...+++||+.+-
T Consensus 12 lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e-~~~l~~-l~h~~i~~~~~~~~~----~~~~~lv~e~~~ 85 (277)
T cd06640 12 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQE-ITVLSQ-CDSPYVTKYYGSYLK----GTKLWIIMEYLG 85 (277)
T ss_pred cccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHH-HHHHHh-CCCCCEeeEEEEEEE----CCEEEEEEecCC
Confidence 3456677776654 34578999887544322 1222222 111211 234578999998732 346789999653
No 52
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=23.52 E-value=3.2e+02 Score=24.36 Aligned_cols=70 Identities=11% Similarity=0.140 Sum_probs=38.3
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
-..|.+|..|... ....++||.+..........+... ..-+.. -.+.-+++++|.+.. ...+++||+.+-
T Consensus 27 lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e-~~~l~~-~~h~~vv~~~~~~~~----~~~~~~v~e~~~ 99 (285)
T cd06648 27 IGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNE-VVIMRD-YQHPNIVEMYSSYLV----GDELWVVMEFLE 99 (285)
T ss_pred eccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHH-HHHHHH-cCCCChheEEEEEEc----CCeEEEEEeccC
Confidence 3457778777553 335699998853322221112211 122221 234568999997753 245688888754
No 53
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=23.50 E-value=4.5e+02 Score=24.14 Aligned_cols=69 Identities=12% Similarity=0.218 Sum_probs=37.2
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|.+|... .+..+.||.+.++... ....+..... .+.....+..++++++++.- ...+++||+.+
T Consensus 4 G~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~~~~~~~~----~~~~~lv~e~~ 78 (327)
T cd05617 4 GRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKH-VFEQASSNPFLVGLHSCFQT----TSRLFLVIEYV 78 (327)
T ss_pred eeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHH-HHHhhcCCCCEeeEEEEEEe----CCEEEEEEeCC
Confidence 356677776543 3467899999864321 1111111111 11111123357888887743 24578999975
No 54
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=23.02 E-value=3.1e+02 Score=23.64 Aligned_cols=68 Identities=15% Similarity=0.173 Sum_probs=39.0
Q ss_pred CCCCCccceEEee-cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQS-YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T-~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
.+.|..|..|--. .+..++||.+..... ...++....-. +..- .+.-+++++|++.- ....++||+.+
T Consensus 14 ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~-l~~l-~~~~i~~~~~~~~~----~~~~~~v~e~~ 82 (256)
T cd05039 14 IGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASV-MTTL-RHPNLVQLLGVVLQ----GNPLYIVTEYM 82 (256)
T ss_pred eecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHH-HHhc-CCcceeeeEEEEcC----CCCeEEEEEec
Confidence 3456677776433 567899999987654 23333333222 2221 23347788887532 34567899865
No 55
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=22.86 E-value=3.6e+02 Score=23.96 Aligned_cols=67 Identities=12% Similarity=0.249 Sum_probs=38.2
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..|--. .+..+++|.++..+......+....-. +.. ++| -+++++|.+... ..+++||+.+
T Consensus 21 g~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~-l~~l~h~--~i~~~~~~~~~~----~~~~lv~e~~ 91 (292)
T cd06644 21 GDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEI-LATCNHP--YIVKLLGAFYWD----GKLWIMIEFC 91 (292)
T ss_pred cCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHH-HHhCCCC--cEeeeEEEEEeC----CeEEEEEecC
Confidence 446666665443 346789999875544433333332221 222 234 588899987532 3578899854
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=22.76 E-value=3.6e+02 Score=24.68 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=36.7
Q ss_pred CCCccceEEee---cCCeEEEEeCCHHHHH---HHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 12 PGKSGAKFYQS---YDRLFIIKTLTSEEVE---RMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 12 ~GKSGs~F~~T---~D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
.|..|..+-.. ....++||.+.+.... ....++...- -+.. +|| -++++++.+.- ....++||+.+
T Consensus 5 ~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~l~~l~hp--~i~~~~~~~~~----~~~~~lv~e~~ 77 (323)
T cd05571 5 KGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESR-VLQNTRHP--FLTALKYSFQT----HDRLCFVMEYA 77 (323)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHH-HHHhCCCC--CCCCEEEEEEc----CCEEEEEEeCC
Confidence 46667666443 3456999999864321 1222222211 1111 234 57888877642 34568899976
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 78 ~ 78 (323)
T cd05571 78 N 78 (323)
T ss_pred C
Confidence 3
No 57
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=22.44 E-value=2.6e+02 Score=24.42 Aligned_cols=68 Identities=22% Similarity=0.288 Sum_probs=37.8
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
...|.+|..|--. .+..+++|.+.++... ...++..+-.. .. -.+.-+++++|++. .....++||+.+
T Consensus 14 ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~-~~~~~~e~~~l-~~-l~h~~i~~~~~~~~----~~~~~~lv~e~~ 84 (263)
T cd05052 14 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVM-KE-IKHPNLVQLLGVCT----REPPFYIITEFM 84 (263)
T ss_pred cCCcccceEEEEEEecCCceEEEEEecCCchH-HHHHHHHHHHH-Hh-CCCCChhheEEEEc----CCCCcEEEEEeC
Confidence 3466777765432 3678999998754332 22222222221 11 12346889998763 234567889864
No 58
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=22.34 E-value=4e+02 Score=24.28 Aligned_cols=68 Identities=15% Similarity=0.243 Sum_probs=35.9
Q ss_pred CCCccceEEee---cCCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 12 PGKSGAKFYQS---YDRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 12 ~GKSGs~F~~T---~D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
.|..|..|-.. .+..+.||.+.+.... ....+. .-..-+.....+..+++++|++.- ....++||+.+
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~-~e~~il~~~~~h~~i~~~~~~~~~----~~~~~lv~e~~ 78 (318)
T cd05570 5 KGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTM-TEKRVLALAGKHPFLTQLHSCFQT----KDRLFFVMEYV 78 (318)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHH-HHHHHHHhccCCCCccceeeEEEc----CCEEEEEEcCC
Confidence 45556665432 3457999999864321 111111 011111111123468999998742 34578999975
No 59
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=22.29 E-value=2.7e+02 Score=21.16 Aligned_cols=68 Identities=12% Similarity=0.089 Sum_probs=39.1
Q ss_pred CCCCCccceEEeec-CCeEEEEeCCHHHH-HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQSY-DRLFIIKTLTSEEV-ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T~-D~~fiiKti~~~E~-~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
...|-++..|-.+. +..++||.+..... ..+..... .+.++.. + .-.++++++.+.-. ..+++||+.+
T Consensus 6 i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~-~~~~l~~-~-~~~~p~~~~~~~~~----~~~~~v~e~~ 75 (155)
T cd05120 6 LKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVA-ILQLLAR-K-GLPVPKVLASGESD----GWSYLLMEWI 75 (155)
T ss_pred cccccccceEEEEecCCeEEEEecCCCCchhHHHHHHH-HHHHHHH-c-CCCCCeEEEEcCCC----CccEEEEEec
Confidence 45677777777664 45999999976543 12222221 3344432 2 23567777655322 4578888865
No 60
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=22.26 E-value=3e+02 Score=23.46 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=39.3
Q ss_pred CCCccceEEeec------CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 12 PGKSGAKFYQSY------DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 12 ~GKSGs~F~~T~------D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
.|.-|..|--.. ...++||.+.........+-+..-+..+..-. +.-++++++.+.. ...+++||+.+
T Consensus 5 ~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-~~~i~~~~~~~~~----~~~~~lv~e~~ 78 (262)
T cd00192 5 EGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG-HPNVVRLLGVCTE----EEPLYLVLEYM 78 (262)
T ss_pred cCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC-CCChheeeeeecC----CCceEEEEEec
Confidence 344455544433 56789999987655442222333333332222 4567888887754 45678899976
No 61
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=22.25 E-value=2.6e+02 Score=25.18 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=38.9
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
-..|.+|..|--. .+..++||.+.......-..+ ..-..-+.. -.+.-+++++|.+.. ....++||+.+-
T Consensus 27 lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~e~~~l~~-~~h~~i~~~~~~~~~----~~~~~lv~e~~~ 99 (297)
T cd06656 27 IGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELI-INEILVMRE-NKNPNIVNYLDSYLV----GDELWVVMEYLA 99 (297)
T ss_pred eccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHH-HHHHHHHHh-CCCCCEeeEEEEEec----CCEEEEeecccC
Confidence 4456777665442 468899999974332221111 111222222 123458899988743 245688998653
No 62
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=22.24 E-value=2.7e+02 Score=25.47 Aligned_cols=71 Identities=14% Similarity=0.279 Sum_probs=38.3
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHHH---HHHHHHHHHHH-HHhcCCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVER---MHSFLKQYHPY-IVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~~---l~~~l~~Y~~~-~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
..|..|..|... .+..++||.+.+.+... ...+...--.. +..+-.+.-+++++|++.- ....++||+.
T Consensus 8 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~----~~~~~lv~E~ 83 (324)
T cd05589 8 GRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT----EDHVCFVMEY 83 (324)
T ss_pred eecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc----CCEEEEEEcC
Confidence 356677776543 35679999998654221 11111111000 0111123458999998742 2456899997
Q ss_pred cc
Q psy11937 84 VF 85 (302)
Q Consensus 84 ~f 85 (302)
+-
T Consensus 84 ~~ 85 (324)
T cd05589 84 AA 85 (324)
T ss_pred CC
Confidence 53
No 63
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=22.01 E-value=3.9e+02 Score=24.64 Aligned_cols=69 Identities=13% Similarity=0.218 Sum_probs=37.5
Q ss_pred CCCccceEEee---cCCeEEEEeCCHHHH---HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 12 PGKSGAKFYQS---YDRLFIIKTLTSEEV---ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 12 ~GKSGs~F~~T---~D~~fiiKti~~~E~---~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.|..|.++-.. .+..+.||.+.++.. ..+..+....... .....+..+++++|++.- ...+++||+.+-
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l-~~~~~hp~iv~~~~~~~~----~~~~~lv~E~~~ 79 (329)
T cd05618 5 RGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVF-EQASNHPFLVGLHSCFQT----ESRLFFVIEYVN 79 (329)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHH-HhcCCCCcCCceeeEEEe----CCEEEEEEeCCC
Confidence 45567666443 345799999986432 1222222222211 111123458889888743 246789999764
No 64
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=21.83 E-value=3.5e+02 Score=23.63 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=39.3
Q ss_pred CCCCCccceEEeecC-------CeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 10 ESPGKSGAKFYQSYD-------RLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 10 ~s~GKSGs~F~~T~D-------~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
.+.|..|+.+-...+ ..++||.++........+.+..-.+-+..- .+.-+++++|.+.. .+....++||+
T Consensus 12 ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l-~~~~i~~~~~~~~~--~~~~~~~lv~e 88 (284)
T cd05038 12 LGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTL-DHENIVKYKGVCEK--PGGRSLRLIME 88 (284)
T ss_pred eccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhC-CCCChheEEeeeec--CCCCceEEEEe
Confidence 345777877766543 469999998544331111122222222211 22347788876522 33455678998
Q ss_pred ecc
Q psy11937 83 NVF 85 (302)
Q Consensus 83 N~f 85 (302)
.+-
T Consensus 89 ~~~ 91 (284)
T cd05038 89 YLP 91 (284)
T ss_pred cCC
Confidence 754
No 65
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=21.80 E-value=3e+02 Score=24.18 Aligned_cols=69 Identities=13% Similarity=0.201 Sum_probs=38.7
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHH--HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEV--ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~--~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
.+.|..|..+--+ .+..++||.+..... .....+....-.+=.-++| -++++++.+.. ...+++||+.+
T Consensus 8 l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~--~i~~~~~~~~~----~~~~~~v~e~~ 81 (286)
T cd07832 8 IGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHP--YVVKLLDVFPH----GSGFVLVMEYM 81 (286)
T ss_pred cccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCC--CCcceeeEEec----CCeeEEEeccc
Confidence 4578888776644 456799999875431 1111222222111111234 47888888744 34567899976
No 66
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=21.70 E-value=4.4e+02 Score=24.20 Aligned_cols=70 Identities=10% Similarity=0.140 Sum_probs=36.3
Q ss_pred CCCccceEEee---cCCeEEEEeCCHHHHHHH--HHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 12 PGKSGAKFYQS---YDRLFIIKTLTSEEVERM--HSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 12 ~GKSGs~F~~T---~D~~fiiKti~~~E~~~l--~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.|..|..|-.. .+..+.||.++++....- .+.+..-..-+..-..+..++++++++.- ....++||+.+-
T Consensus 5 ~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~----~~~~~lv~e~~~ 79 (329)
T cd05588 5 RGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT----ESRLFFVIEFVS 79 (329)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc----CCEEEEEEeCCC
Confidence 45667666444 355799999986432211 11111111111111113357888887742 245789999753
No 67
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=21.70 E-value=2.4e+02 Score=24.89 Aligned_cols=69 Identities=19% Similarity=0.179 Sum_probs=37.3
Q ss_pred CCCCCccceEEee--------cCCeEEEEeCCHHHHHH-HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEE
Q psy11937 10 ESPGKSGAKFYQS--------YDRLFIIKTLTSEEVER-MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVA 80 (302)
Q Consensus 10 ~s~GKSGs~F~~T--------~D~~fiiKti~~~E~~~-l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvV 80 (302)
.+.|..|.++.-. ....+.||.++..+... -.+++... .-+.. -.+.-+++++|.+. .....++|
T Consensus 14 ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~-~~l~~-l~~~~iv~~~~~~~----~~~~~~lv 87 (277)
T cd05062 14 LGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKE-FNCHHVVRLLGVVS----QGQPTLVI 87 (277)
T ss_pred eccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHH-HHHHh-CCCCCeeeEEEEEc----CCCCeEEE
Confidence 3567777766421 23579999987543221 12233222 22222 23345888888763 22356789
Q ss_pred Eeec
Q psy11937 81 MRNV 84 (302)
Q Consensus 81 M~N~ 84 (302)
|+.+
T Consensus 88 ~e~~ 91 (277)
T cd05062 88 MELM 91 (277)
T ss_pred EecC
Confidence 9965
No 68
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=21.44 E-value=2.8e+02 Score=25.48 Aligned_cols=69 Identities=10% Similarity=0.239 Sum_probs=40.0
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHH--HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVER--MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~--l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..+-... +..++||.+.+.+... ....+..-..-+... .+..++++++.+. .....++||+.+
T Consensus 10 g~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~-~~~~i~~~~~~~~----~~~~~~lv~e~~ 83 (350)
T cd05573 10 GRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADA-DSPWIVKLYYSFQ----DEEHLYLVMEYM 83 (350)
T ss_pred EeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhc-CCCCccchhhhee----cCCeEEEEEcCC
Confidence 4566777765443 4679999998765432 112222222323222 2456888887763 234578899875
No 69
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=21.39 E-value=3.6e+02 Score=24.63 Aligned_cols=70 Identities=14% Similarity=0.145 Sum_probs=37.0
Q ss_pred CCCccceEEee---cCCeEEEEeCCHHHHH--HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 12 PGKSGAKFYQS---YDRLFIIKTLTSEEVE--RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 12 ~GKSGs~F~~T---~D~~fiiKti~~~E~~--~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
.|..|..|.-. ....++||.+.+.... .-.+.+.....-+.....+-.++++++.+.- ....++||+.+-
T Consensus 5 ~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~----~~~~~lv~E~~~ 79 (316)
T cd05620 5 KGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT----KEHLFFVMEFLN 79 (316)
T ss_pred eCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe----CCEEEEEECCCC
Confidence 46667666443 2457899999864321 0111111112222211123368888888742 246689999763
No 70
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=21.24 E-value=3.5e+02 Score=24.02 Aligned_cols=69 Identities=14% Similarity=0.249 Sum_probs=37.6
Q ss_pred CCCCccceEEee-------cC-CeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 11 SPGKSGAKFYQS-------YD-RLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 11 s~GKSGs~F~~T-------~D-~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
..|-.|..+... .+ ..+.||.+..........+... ..-+.. -.+.-+++++|.+. ....+++||+
T Consensus 14 g~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e-~~~l~~-l~h~~i~~~~~~~~----~~~~~~lv~e 87 (288)
T cd05093 14 GEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHRE-AELLTN-LQHEHIVKFYGVCV----EGDPLIMVFE 87 (288)
T ss_pred CCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHH-HHHHHh-CCCCCcceEEEEEe----cCCccEEEEE
Confidence 455567666543 11 2478899875433322222222 222222 22346889999874 2345789999
Q ss_pred ecc
Q psy11937 83 NVF 85 (302)
Q Consensus 83 N~f 85 (302)
.+-
T Consensus 88 ~~~ 90 (288)
T cd05093 88 YMK 90 (288)
T ss_pred cCC
Confidence 643
No 71
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=21.24 E-value=4.1e+02 Score=23.02 Aligned_cols=68 Identities=7% Similarity=0.098 Sum_probs=35.9
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHH---HHHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEV---ERMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~---~~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
..|..|..+--. ....++||.+...+. +....+....- -+.. +|| -++++++.+.- ....++||+.
T Consensus 11 g~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~-~l~~~~h~--~i~~~~~~~~~----~~~~~~v~e~ 83 (267)
T cd08229 11 GRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEID-LLKQLNHP--NVIKYYASFIE----DNELNIVLEL 83 (267)
T ss_pred cccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHH-HHHHccCC--chhhhhheeEe----CCeEEEEEEe
Confidence 345556654322 567999998864322 22222222211 1111 234 47788887743 2356789997
Q ss_pred cc
Q psy11937 84 VF 85 (302)
Q Consensus 84 ~f 85 (302)
+.
T Consensus 84 ~~ 85 (267)
T cd08229 84 AD 85 (267)
T ss_pred cC
Confidence 53
No 72
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=21.22 E-value=3.3e+02 Score=24.93 Aligned_cols=69 Identities=14% Similarity=0.255 Sum_probs=36.6
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHHHH---HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEEVE---RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E~~---~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|.+|--. .+..+.||.+.+.... ....++..-- -+.....+..++++++++. .....++||+.+
T Consensus 4 g~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~-~l~~~~~h~~iv~~~~~~~----~~~~~~iv~Ey~ 78 (320)
T cd05590 4 GKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKR-ILSLARNHPFLTQLYCCFQ----TPDRLFFVMEFV 78 (320)
T ss_pred eeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHH-HHHhccCCCchhceeeEEE----cCCEEEEEEcCC
Confidence 356667766433 3456899999864321 1111111111 1111112345888888873 234578999975
No 73
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=21.09 E-value=2e+02 Score=25.53 Aligned_cols=67 Identities=9% Similarity=0.099 Sum_probs=38.4
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCH----HHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTS----EEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~----~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
-+.|..|..|-.. .+..+++|.++. .....+.+-+.-. ..+ ++ .-+++++|.+.. ....++||+
T Consensus 9 ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l-~~~--~~--~~i~~~~~~~~~----~~~~~lv~e 79 (286)
T cd06622 9 LGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDIL-HKA--VS--PYIVDFYGAFFI----EGAVYMCME 79 (286)
T ss_pred hcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHH-Hhc--CC--CcHHhhhhheec----CCeEEEEEe
Confidence 4567777766544 358899998763 2222232222211 112 23 458899988754 245678999
Q ss_pred ecc
Q psy11937 83 NVF 85 (302)
Q Consensus 83 N~f 85 (302)
.+-
T Consensus 80 ~~~ 82 (286)
T cd06622 80 YMD 82 (286)
T ss_pred ecC
Confidence 754
No 74
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=21.07 E-value=3.9e+02 Score=22.55 Aligned_cols=70 Identities=14% Similarity=0.170 Sum_probs=38.9
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHH--HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEV--ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~--~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
+.|..|..|--.. ...++||.+...+. ... +.+...+..+..- .+.-+++++|..... ....+++||+.+
T Consensus 9 ~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~-~~~~~e~~~l~~l-~~~~i~~~~~~~~~~--~~~~~~lv~e~~ 83 (260)
T cd06606 9 GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEEL-EALEREIRILSSL-QHPNIVRYYGSERDE--EKNTLNIFLEYV 83 (260)
T ss_pred eecCceEEEEEEECCCCcEEEEEEeeccccchHHH-HHHHHHHHHHHHc-CCCCEeeEEEEEecC--CCCeEEEEEEec
Confidence 4577777766553 45688898876542 122 2222333333332 234577888777432 135667888864
No 75
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=21.05 E-value=4.4e+02 Score=22.55 Aligned_cols=70 Identities=10% Similarity=0.164 Sum_probs=37.9
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCHHHH--HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTSEEV--ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~~E~--~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
...|..|..+-.+ ....+++|.+..++. .....+....-. +.. -.+.-+++++|.+.- ...+++||+.+
T Consensus 8 l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~-l~~-l~h~~i~~~~~~~~~----~~~~~lv~e~~ 81 (256)
T cd08529 8 IGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARV-LAK-LDSSYIIRYYESFLD----KGKLNIVMEYA 81 (256)
T ss_pred ecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHH-HHh-cCCCCeehheeeecc----CCEEEEEEEeC
Confidence 3457777665544 347799998864321 112223222221 221 123457888887632 25678899965
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 82 ~ 82 (256)
T cd08529 82 E 82 (256)
T ss_pred C
Confidence 3
No 76
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=20.75 E-value=4.5e+02 Score=24.02 Aligned_cols=70 Identities=16% Similarity=0.256 Sum_probs=37.8
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHH---HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEV---ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~---~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
..|..|..+--.. ...++||.+.+... .....++...-. +..-..+..++++++++.- ....++||+.+
T Consensus 9 g~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~-l~~~~~~~~i~~~~~~~~~----~~~~~lv~E~~ 83 (324)
T cd05587 9 GKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRV-LALPGKPPFLTQLHSCFQT----MDRLYFVMEYV 83 (324)
T ss_pred eeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHH-HHhcCCCCceeeeEEEEEc----CCEEEEEEcCC
Confidence 4566777765433 24699999986432 112222222111 1111223467888877732 24568899976
Q ss_pred c
Q psy11937 85 F 85 (302)
Q Consensus 85 f 85 (302)
-
T Consensus 84 ~ 84 (324)
T cd05587 84 N 84 (324)
T ss_pred C
Confidence 3
No 77
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=20.74 E-value=3.2e+02 Score=24.25 Aligned_cols=55 Identities=11% Similarity=0.085 Sum_probs=31.3
Q ss_pred CeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 25 RLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 25 ~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
-+.+||.+.......-.++.... ..+.. -.+.-+++++|++. .....++||+.+-
T Consensus 45 ~~v~~k~~~~~~~~~~~~~~~~~-~~~~~-l~h~niv~~~~~~~----~~~~~~lv~ey~~ 99 (274)
T cd05076 45 LRVVLKVLDPSHRDIALAFFETA-SLMSQ-VSHIHLAFVHGVCV----RGSENIMVEEFVE 99 (274)
T ss_pred eeEEEEecChHHHHHHHHHHHHH-HHHhc-CCCCCeeeEEEEEE----eCCceEEEEecCC
Confidence 45889999876554333333332 22222 12345889999753 1234578999754
No 78
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=20.57 E-value=2.8e+02 Score=24.36 Aligned_cols=71 Identities=14% Similarity=0.207 Sum_probs=38.5
Q ss_pred CCCCCccceEEee---cCCeEEEEeCCH----HHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 10 ESPGKSGAKFYQS---YDRLFIIKTLTS----EEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 10 ~s~GKSGs~F~~T---~D~~fiiKti~~----~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
...|..|.+|--. .+..++||.++. .+.+.+.+-+. ..+-+. ...+.-+++++|.+. ....+++||+
T Consensus 9 l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~-~l~~l~-~~~~~~vi~~~~~~~----~~~~~~lv~e 82 (277)
T cd06917 9 IGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVA-LLSQLR-QSQPPNITKYYGSYL----KGPRLWIIME 82 (277)
T ss_pred eeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHH-HHHHhc-cCCCCCeeeEeeeee----eCCEEEEEEe
Confidence 3456667666533 457899998753 33333322211 122221 112446888888763 2345788999
Q ss_pred eccC
Q psy11937 83 NVFS 86 (302)
Q Consensus 83 N~f~ 86 (302)
++-.
T Consensus 83 ~~~~ 86 (277)
T cd06917 83 YAEG 86 (277)
T ss_pred cCCC
Confidence 7643
No 79
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=20.51 E-value=2.1e+02 Score=25.68 Aligned_cols=70 Identities=10% Similarity=0.245 Sum_probs=39.6
Q ss_pred CCCCCccceEEeec---CCeEEEEeCCHHHHH-HHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeec
Q psy11937 10 ESPGKSGAKFYQSY---DRLFIIKTLTSEEVE-RMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNV 84 (302)
Q Consensus 10 ~s~GKSGs~F~~T~---D~~fiiKti~~~E~~-~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~ 84 (302)
...|.+|..|-... ...++||.+++.+.. ...+++.+.-. +...+.+.-+++++|.+.. ....++||+.+
T Consensus 23 lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~-~~~~~~~~~i~~~~~~~~~----~~~~~~v~e~~ 96 (296)
T cd06618 23 IGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDV-VLKSHDCPYIVKCYGYFIT----DSDVFICMELM 96 (296)
T ss_pred eeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHH-HHhccCCCchHhhheeeec----CCeEEEEeecc
Confidence 34677787766554 356899998753221 12223332221 2233334568889998743 24568888865
No 80
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=20.44 E-value=4.8e+02 Score=22.27 Aligned_cols=67 Identities=15% Similarity=0.173 Sum_probs=38.0
Q ss_pred CCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 11 SPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 11 s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
..|..|..+--.. +..+++|.++.... .+-+.+-.+.+..- .+.-+++++|.+... ...++||+.+-
T Consensus 12 ~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l-~~~~i~~~~~~~~~~----~~~~l~~e~~~ 81 (256)
T cd06612 12 GEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQC-DSPYIVKYYGSYFKN----TDLWIVMEYCG 81 (256)
T ss_pred cCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhC-CCCcEeeeeeeeecC----CcEEEEEecCC
Confidence 3466666654432 46899999986643 22222333333221 233577899887532 45678888643
No 81
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=20.20 E-value=4.2e+02 Score=23.41 Aligned_cols=72 Identities=10% Similarity=0.154 Sum_probs=37.9
Q ss_pred CCCCCccceEEee------cCCeEEEEeCCHHHHHH---HHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEE
Q psy11937 10 ESPGKSGAKFYQS------YDRLFIIKTLTSEEVER---MHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVA 80 (302)
Q Consensus 10 ~s~GKSGs~F~~T------~D~~fiiKti~~~E~~~---l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvV 80 (302)
-+.|-.|..|... ....++||.++...... ..+-+..=.+-+..-..+..++++++++... ...++|
T Consensus 8 lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~----~~~~lv 83 (290)
T cd05613 8 LGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTD----TKLHLI 83 (290)
T ss_pred eccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecC----CeEEEE
Confidence 3567778776543 23569999987643211 1111111112221111234688888777432 355689
Q ss_pred Eeecc
Q psy11937 81 MRNVF 85 (302)
Q Consensus 81 M~N~f 85 (302)
|+.+-
T Consensus 84 ~e~~~ 88 (290)
T cd05613 84 LDYIN 88 (290)
T ss_pred EecCC
Confidence 99864
No 82
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=20.17 E-value=2.2e+02 Score=25.10 Aligned_cols=65 Identities=8% Similarity=0.067 Sum_probs=35.6
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHH-----HHHHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEe
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSE-----EVERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMR 82 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~-----E~~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~ 82 (302)
..|..|.+|-.. ....++||.++.. +.+.+.++ -.-+ +...+.-+++++|.+.. ....++||+
T Consensus 10 g~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~----~~~~-~~~~~~~iv~~~~~~~~----~~~~~lv~e 80 (283)
T cd06617 10 GRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDL----DISM-RSVDCPYTVTFYGALFR----EGDVWICME 80 (283)
T ss_pred cccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHH----HHHH-HHcCCCCeeeeeEEEec----CCcEEEEhh
Confidence 456667655443 2467899988643 33333322 1112 22234568999998742 233567787
Q ss_pred ec
Q psy11937 83 NV 84 (302)
Q Consensus 83 N~ 84 (302)
.+
T Consensus 81 ~~ 82 (283)
T cd06617 81 VM 82 (283)
T ss_pred hh
Confidence 54
No 83
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=20.09 E-value=4.1e+02 Score=24.53 Aligned_cols=71 Identities=13% Similarity=0.149 Sum_probs=37.7
Q ss_pred CCCCCccceEEeec---CCeEEEEeCCHHHHHHHHHHHHHHHHHHHh-cCCCcccceeeEEEEEEeCCeEEEEEEEeecc
Q psy11937 10 ESPGKSGAKFYQSY---DRLFIIKTLTSEEVERMHSFLKQYHPYIVE-RHGKTLLPQYLGMYRLTVDGVEHYVVAMRNVF 85 (302)
Q Consensus 10 ~s~GKSGs~F~~T~---D~~fiiKti~~~E~~~l~~~l~~Y~~~~~~-~~~~slL~k~~G~~~i~~~~~~~~fvVM~N~f 85 (302)
-..|..|.+|.... ...+++|.+..+-.....+-+..-.+.+.. ++| -+++++|++... ...++||+.+-
T Consensus 13 lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~--~iv~~~~~~~~~----~~~~lv~e~~~ 86 (333)
T cd06650 13 LGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP--YIVGFYGAFYSD----GEISICMEHMD 86 (333)
T ss_pred ccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCC--cccceeEEEEEC----CEEEEEEecCC
Confidence 34677777766553 235777876532111111112222233322 234 489999988542 35689999764
Q ss_pred C
Q psy11937 86 S 86 (302)
Q Consensus 86 ~ 86 (302)
.
T Consensus 87 ~ 87 (333)
T cd06650 87 G 87 (333)
T ss_pred C
Confidence 3
No 84
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=20.08 E-value=3.8e+02 Score=24.29 Aligned_cols=70 Identities=13% Similarity=0.120 Sum_probs=37.9
Q ss_pred CCCCccceEEee---cCCeEEEEeCCHHH--HHHHHHHHHHH--HHHHHhcCCCcccceeeEEEEEEeC-CeEEEEEEEe
Q psy11937 11 SPGKSGAKFYQS---YDRLFIIKTLTSEE--VERMHSFLKQY--HPYIVERHGKTLLPQYLGMYRLTVD-GVEHYVVAMR 82 (302)
Q Consensus 11 s~GKSGs~F~~T---~D~~fiiKti~~~E--~~~l~~~l~~Y--~~~~~~~~~~slL~k~~G~~~i~~~-~~~~~fvVM~ 82 (302)
..|..|..|-.. ....++||.+.... ......++... ...+ +||+ +++++|++..... .....++||+
T Consensus 9 g~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l--~hpn--iv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 9 GKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLL--RHPD--IVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred eecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhC--CCCC--EeeecceEeccCCCCCceEEEEEe
Confidence 356677776554 34679999987421 11112222222 1222 3554 8888887643322 2245688999
Q ss_pred ec
Q psy11937 83 NV 84 (302)
Q Consensus 83 N~ 84 (302)
.+
T Consensus 85 ~~ 86 (338)
T cd07859 85 LM 86 (338)
T ss_pred cC
Confidence 75
No 85
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=20.08 E-value=1.2e+02 Score=25.60 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=39.8
Q ss_pred CCCCCccceEEeecC--CeEEEEeCCHHHH----HHHHHHHHHHHHHHHhcCCCcccceeeEEEEEEeCCeEEEEEEEee
Q psy11937 10 ESPGKSGAKFYQSYD--RLFIIKTLTSEEV----ERMHSFLKQYHPYIVERHGKTLLPQYLGMYRLTVDGVEHYVVAMRN 83 (302)
Q Consensus 10 ~s~GKSGs~F~~T~D--~~fiiKti~~~E~----~~l~~~l~~Y~~~~~~~~~~slL~k~~G~~~i~~~~~~~~fvVM~N 83 (302)
.+.|.++..|..+.+ ..||+|.....+. ..+. .=-....++... .--.+++++...-.. ....+++||+.
T Consensus 6 l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~-~E~~~~~~l~~~--~~~vp~~~~~~~~~~-~~~~~~~v~e~ 81 (223)
T cd05154 6 LSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVA-REYRVLRALAGT--GVPVPKVLALCEDPS-VLGTPFYVMER 81 (223)
T ss_pred cCCCccceEEEEEecCCcceEEEeCCCcccCcccccHH-HHHHHHHHhhCC--CCCCCCEEEECCCCC-ccCCceEEEEE
Confidence 568999999887755 4999999876543 1111 111334555321 112566655432110 01245789998
Q ss_pred cc
Q psy11937 84 VF 85 (302)
Q Consensus 84 ~f 85 (302)
+=
T Consensus 82 i~ 83 (223)
T cd05154 82 VD 83 (223)
T ss_pred eC
Confidence 73
Done!