Your job contains 1 sequence.
>psy11941
MESQDSEEVKQEEVEYDDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQE
VDMVLLGGDLFHINKPSPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDHVNYMDP
NLNISLPVFTINGNHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNET
KVAIFGLGYVKDERLCNMIKHNKVKYMKPTDDKDIIYILVLHQNRPERGTVKNIAEDSIP
SFFHFILWGHEHECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYK
LVPRSLETVRPFV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11941
(313 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020270 - symbol:mre11 "meiotic recombination 11" ... 814 4.1e-81 1
UNIPROTKB|F1N9H0 - symbol:MRE11A "Uncharacterized protein... 798 2.0e-79 1
UNIPROTKB|F1NYL0 - symbol:MRE11A "Uncharacterized protein... 798 2.0e-79 1
ZFIN|ZDB-GENE-040426-2638 - symbol:mre11a "meiotic recomb... 794 5.4e-79 1
UNIPROTKB|Q9IAM7 - symbol:MRE11 "Double-strand break repa... 789 1.8e-78 1
DICTYBASE|DDB_G0293546 - symbol:mre11 "DNA repair exonucl... 785 4.8e-78 1
MGI|MGI:1100512 - symbol:Mre11a "meiotic recombination 11... 773 9.0e-77 1
UNIPROTKB|B3KTC7 - symbol:MRE11A "Double-strand break rep... 770 1.9e-76 1
UNIPROTKB|F8W7U8 - symbol:MRE11A "Double-strand break rep... 770 1.9e-76 1
UNIPROTKB|P49959 - symbol:MRE11A "Double-strand break rep... 770 1.9e-76 1
UNIPROTKB|E1BIN9 - symbol:MRE11A "Uncharacterized protein... 769 2.4e-76 1
UNIPROTKB|E2RTK8 - symbol:MRE11A "Uncharacterized protein... 768 3.1e-76 1
UNIPROTKB|F1PUK4 - symbol:MRE11A "Uncharacterized protein... 768 3.1e-76 1
RGD|69263 - symbol:Mre11a "MRE11 meiotic recombination 11... 768 3.1e-76 1
UNIPROTKB|Q9JIM0 - symbol:Mre11a "Double-strand break rep... 768 3.1e-76 1
UNIPROTKB|F1STJ9 - symbol:MRE11A "Uncharacterized protein... 766 5.0e-76 1
POMBASE|SPAC13C5.07 - symbol:mre11 "Mre11 nuclease" speci... 753 1.2e-74 1
CGD|CAL0000164 - symbol:MRE11 species:5476 "Candida albic... 705 1.4e-69 1
UNIPROTKB|Q59S37 - symbol:MRE11 "Putative uncharacterized... 705 1.4e-69 1
TAIR|locus:2162615 - symbol:MRE11 "MEIOTIC RECOMBINATION ... 686 1.5e-67 1
WB|WBGene00003405 - symbol:mre-11 species:6239 "Caenorhab... 646 2.6e-63 1
SGD|S000004837 - symbol:MRE11 "Subunit of the MRX complex... 632 7.9e-62 1
UNIPROTKB|F5GXT0 - symbol:MRE11A "Double-strand break rep... 582 1.6e-56 1
UNIPROTKB|F5H256 - symbol:MRE11A "Double-strand break rep... 351 4.7e-32 1
UNIPROTKB|F5H742 - symbol:MRE11A "Double-strand break rep... 298 1.9e-26 1
UNIPROTKB|Q8U1N9 - symbol:mre11 "DNA double-strand break ... 141 1.6e-11 2
TIGR_CMR|GSU_1724 - symbol:GSU_1724 "nuclease SbcCD, D su... 107 1.6e-07 2
>FB|FBgn0020270 [details] [associations]
symbol:mre11 "meiotic recombination 11" species:7227
"Drosophila melanogaster" [GO:0004519 "endonuclease activity"
evidence=ISS;NAS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0004527 "exonuclease activity" evidence=ISS;NAS]
[GO:0006289 "nucleotide-excision repair" evidence=NAS] [GO:0030145
"manganese ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IMP]
[GO:0051276 "chromosome organization" evidence=IMP] [GO:0031572 "G2
DNA damage checkpoint" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0016233 "telomere capping"
evidence=IDA] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
GO:GO:0005634 GO:GO:0007126 EMBL:AE014134 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0016233 GO:GO:0031572 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 EMBL:AF132144
RefSeq:NP_001245981.1 RefSeq:NP_523547.1 UniGene:Dm.407 SMR:Q9XYZ4
STRING:Q9XYZ4 EnsemblMetazoa:FBtr0080213 EnsemblMetazoa:FBtr0308750
GeneID:34565 KEGG:dme:Dmel_CG16928 UCSC:CG16928-RA CTD:34565
FlyBase:FBgn0020270 InParanoid:Q9XYZ4 OMA:VNYFGRW OrthoDB:EOG44B8HS
GenomeRNAi:34565 NextBio:789077 Uniprot:Q9XYZ4
Length = 620
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 158/314 (50%), Positives = 218/314 (69%)
Query: 15 EYDDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHIN 74
E D N IRI++A+D HLGY E D RG DSF +FEEILE A+ ++VDM+LLGGDLFH
Sbjct: 8 EQDADNVIRILVATDNHLGYGEKDAVRGEDSFTAFEEILELAVSEDVDMILLGGDLFHDA 67
Query: 75 KPSPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVM---CNDHVNYMDPNLNISLPVFTI 131
PS L KC+E LR+Y GDR V ++++SD N VNY DPNLNI++PVF+I
Sbjct: 68 VPSQNALHKCIELLRRYTFGDRPVSLEILSDQGQCFHNAVNQSVNYEDPNLNIAIPVFSI 127
Query: 132 NGNHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVK 191
+GNHDDPSG +++LD++S SGLVNYFG+ T+L ++ ++P++++K E+++A++GL ++
Sbjct: 128 HGNHDDPSGFGRLSSLDLLSTSGLVNYFGRWTDLTQVEISPVLMRKGESQLALYGLSHIH 187
Query: 192 DERLCNMIKHNKVKYMKPT------------DDKDIIYILVLHQNRPERGTVKNIAEDSI 239
D RL +IK KVK+ P +++D ++LV+HQNR +RG + ED +
Sbjct: 188 DGRLARLIKDFKVKFNCPENVANGEDGNESKEEEDWFHLLVVHQNRADRGPKNYLPEDLL 247
Query: 240 PSFFHFILWGHEHECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNY 299
PSF H ++WGHEH+CRI+PE N K+RF+V QPGS V TSL GEA +K G+L K +
Sbjct: 248 PSFLHLVIWGHEHDCRIEPEENAKKRFYVSQPGSSVPTSLSEGEAKKKHVGLLEIYKGKF 307
Query: 300 KLVPRSLETVRPFV 313
KL P LETVRPFV
Sbjct: 308 KLKPLPLETVRPFV 321
>UNIPROTKB|F1N9H0 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0000075 "cell cycle
checkpoint" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007129 "synapsis" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0031954 "positive regulation of
protein autophosphorylation" evidence=IEA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IEA] [GO:0033674
"positive regulation of kinase activity" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0003677 GO:GO:0008283 GO:GO:0030145 GO:GO:0004003
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000075 GO:GO:0007129
GO:GO:0007062 GO:GO:0031954 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 GO:GO:0033674
EMBL:AADN02004885 EMBL:AADN02004886 IPI:IPI00820681
Ensembl:ENSGALT00000036414 ArrayExpress:F1N9H0 Uniprot:F1N9H0
Length = 702
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 150/300 (50%), Positives = 210/300 (70%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I+IA+DIHLGYLE D RGND+FV+F EILE A EVD +LLGGDLFH NKP
Sbjct: 8 DDEDTFKILIATDIHLGYLEKDAVRGNDTFVTFNEILEHAQKNEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S T+ CLE+LRKYC+GDR V +V+SD + VNY D NLNIS+P+F+I+G
Sbjct: 68 SRKTIHTCLESLRKYCMGDRPVSFEVLSDQAVNFQFSKFPWVNYQDENLNISMPIFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +GL+N+FG+ T++ +I ++P++++K TK+A++GLG + DE
Sbjct: 128 NHDDPTGVDALCALDILSCAGLLNHFGRSTSVEKIDISPILLRKGRTKIALYGLGAIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + +V ++P +D+D + + V+HQNR + G I E + F + ++WGHEH
Sbjct: 188 RLYRMFVNKQVTMLRPKEDEDSWFNMFVIHQNRSKHGATNYIPEQFLDDFINLVVWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPRSLETVRPF 312
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L + K+ +LETVR F
Sbjct: 248 ECKITPAQNEQQHFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGKKMKMQRIALETVRTF 307
>UNIPROTKB|F1NYL0 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0007126 GO:GO:0030145 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0004519 PANTHER:PTHR10139 TIGRFAMs:TIGR00583
GeneTree:ENSGT00390000017288 IPI:IPI00599486 EMBL:AADN02004885
EMBL:AADN02004886 Ensembl:ENSGALT00000027819 ArrayExpress:F1NYL0
Uniprot:F1NYL0
Length = 693
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 150/300 (50%), Positives = 210/300 (70%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I+IA+DIHLGYLE D RGND+FV+F EILE A EVD +LLGGDLFH NKP
Sbjct: 1 DDEDTFKILIATDIHLGYLEKDAVRGNDTFVTFNEILEHAQKNEVDFILLGGDLFHENKP 60
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S T+ CLE+LRKYC+GDR V +V+SD + VNY D NLNIS+P+F+I+G
Sbjct: 61 SRKTIHTCLESLRKYCMGDRPVSFEVLSDQAVNFQFSKFPWVNYQDENLNISMPIFSIHG 120
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +GL+N+FG+ T++ +I ++P++++K TK+A++GLG + DE
Sbjct: 121 NHDDPTGVDALCALDILSCAGLLNHFGRSTSVEKIDISPILLRKGRTKIALYGLGAIPDE 180
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + +V ++P +D+D + + V+HQNR + G I E + F + ++WGHEH
Sbjct: 181 RLYRMFVNKQVTMLRPKEDEDSWFNMFVIHQNRSKHGATNYIPEQFLDDFINLVVWGHEH 240
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPRSLETVRPF 312
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L + K+ +LETVR F
Sbjct: 241 ECKITPAQNEQQHFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGKKMKMQRIALETVRTF 300
>ZFIN|ZDB-GENE-040426-2638 [details] [associations]
symbol:mre11a "meiotic recombination 11 homolog A
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0004519
"endonuclease activity" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0030145
"manganese ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0004518
"nuclease activity" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
ZFIN:ZDB-GENE-040426-2638 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288
EMBL:CABZ01086029 EMBL:CABZ01086030 EMBL:CABZ01086031
EMBL:CABZ01086032 EMBL:CABZ01086033 EMBL:CABZ01086034
EMBL:CABZ01086035 EMBL:CABZ01086036 EMBL:CABZ01086037
EMBL:CABZ01086038 EMBL:CU914486 IPI:IPI00509459
Ensembl:ENSDART00000004840 Ensembl:ENSDART00000128572
Uniprot:F1R0G2
Length = 619
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 145/302 (48%), Positives = 215/302 (71%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I+IA+DIHLGYLE D RGND+FV+F+EI++QA+ EVD VLLGGDLFH NKP
Sbjct: 9 DDEDTFKILIATDIHLGYLEKDAIRGNDTFVTFDEIMKQAMQNEVDFVLLGGDLFHDNKP 68
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S T+ C+E +RKYC+GDR + ++ISD + + VNY+D NLNIS+P+F+++G
Sbjct: 69 SRKTMHSCMEVMRKYCMGDRPIIFEIISDQAVNFSHSRFPWVNYLDDNLNISIPIFSVHG 128
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + A+D++S +GLVN+FG+ ++ ++ ++P+++QK +T++A++GLG + DE
Sbjct: 129 NHDDPTGSDGLCAVDLLSCAGLVNHFGRSRSVEKVEISPVLLQKGDTRIALYGLGSIPDE 188
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M +N+V ++P +D+D + + V+HQNR + G I E + F ++WGHEH
Sbjct: 189 RLYRMFVNNQVTMLRPREDEDGWFNLFVIHQNRSKHGATNYIPEQFLDDFLDLVVWGHEH 248
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L K N + +P L+TVR
Sbjct: 249 ECKIAPVRNEQQLFYVTQPGSSVITSLSPGEAVKKHIGLLRVKGKKMNLQKIP--LQTVR 306
Query: 311 PF 312
F
Sbjct: 307 QF 308
>UNIPROTKB|Q9IAM7 [details] [associations]
symbol:MRE11 "Double-strand break repair protein MRE11"
species:9031 "Gallus gallus" [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006302
"double-strand break repair" evidence=TAS] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0007126 GO:GO:0005654 GO:GO:0030145
GO:GO:0004527 GO:GO:0090305 GO:GO:0000724 GO:GO:0004519
Reactome:REACT_115612 eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 EMBL:AF166094 IPI:IPI00599486
RefSeq:NP_990109.1 UniGene:Gga.3157 ProteinModelPortal:Q9IAM7
STRING:Q9IAM7 GeneID:395555 KEGG:gga:395555 CTD:4361
HOVERGEN:HBG052508 OrthoDB:EOG46WZ82 NextBio:20815630
Uniprot:Q9IAM7
Length = 700
Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
Identities = 149/300 (49%), Positives = 209/300 (69%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I+IA+DIHLGYLE D RGND+FV+F EILE A EVD +LLGGDLFH NKP
Sbjct: 8 DDEDTFKILIATDIHLGYLEKDAVRGNDTFVTFNEILEHAQKNEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKL---VMCNDHVNYMDPNLNISLPVFTING 133
S T+ CLE+LRKYC+GDR V +V+SD + + VNY D NLNI +P+F+I+G
Sbjct: 68 SRKTIHTCLESLRKYCMGDRPVSFEVLSDQAVNFQLSKFPWVNYQDENLNIFMPIFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +GL+N+FG+ T++ +I ++P++++K TK+A++GLG + DE
Sbjct: 128 NHDDPTGVDALCALDILSCAGLLNHFGRSTSVEKIDISPILLRKGRTKIALYGLGAIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + +V ++P +D+D + + V+HQNR + G I E + F + +WGHEH
Sbjct: 188 RLYRMFVNKQVTMLRPKEDEDSWFNMFVIHQNRSKHGATNYIPEQFLDDFINLAVWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPRSLETVRPF 312
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L + K+ +LETVR F
Sbjct: 248 ECKITPAQNEQQHFYVTQPGSSVVTSLSPGEAVKKHIGLLRVKGKKMKMQRIALETVRTF 307
>DICTYBASE|DDB_G0293546 [details] [associations]
symbol:mre11 "DNA repair exonuclease" species:44689
"Dictyostelium discoideum" [GO:0006303 "double-strand break repair
via nonhomologous end joining" evidence=ISS] [GO:0030145 "manganese
ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA;ISS] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0004519 "endonuclease activity"
evidence=IEA;ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0030870 "Mre11 complex" evidence=ISS] [GO:0008408
"3'-5' exonuclease activity" evidence=ISS] [GO:0090305 "nucleic
acid phosphodiester bond hydrolysis" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 dictyBase:DDB_G0293546 GO:GO:0007126
GO:GO:0042803 GenomeReviews:CM000155_GR GO:GO:0030145 GO:GO:0004519
GO:GO:0008408 EMBL:AAFI02000218 GO:GO:0006303 eggNOG:COG0420
KO:K10865 PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GO:GO:0030870
RefSeq:XP_628997.1 ProteinModelPortal:Q54BN2 STRING:Q54BN2
EnsemblProtists:DDB0232403 GeneID:8629281 KEGG:ddi:DDB_G0293546
InParanoid:Q54BN2 OMA:GYSTINP ProtClustDB:CLSZ2728681
Uniprot:Q54BN2
Length = 689
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 160/325 (49%), Positives = 216/325 (66%)
Query: 2 ESQDSEEVKQEEVEYD----------DRNTIRIMIASDIHLGYLETDRERGNDSFVSFEE 51
E+++SE ++ +E E ++N +RI++A+D HLGYLE D RG+DSF SFEE
Sbjct: 13 ENEESENIQMDENEKQIPIQTTNDPQNKNIMRILVATDNHLGYLERDPIRGDDSFNSFEE 72
Query: 52 ILEQALDQEVDMVLLGGDLFHINKPSPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMC 111
IL+ A +VDMVLLGGDLFH NKPS + L + +E RKYC+GD V I +SD +
Sbjct: 73 ILKYAHTLKVDMVLLGGDLFHDNKPSRSCLYRTMELFRKYCLGDSPVRIQFLSDQSVNFS 132
Query: 112 ND-H-VNYMDPNLNISLPVFTINGNHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEIT 169
N H VNY DPN NISLP+F+I+GNHDDP+G +AALD++S S LVNYFGK ++++IT
Sbjct: 133 NQFHTVNYEDPNFNISLPIFSIHGNHDDPTGEGGLAALDLLSVSNLVNYFGKTEDIDDIT 192
Query: 170 LNPLIIQKNETKVAIFGLGYVKDERLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPER 228
+ PL++ K ETK+AI+GLG ++DERL + VK M+P + KD + ILVLHQNR
Sbjct: 193 VYPLLLGKGETKIAIYGLGNIRDERLHRTFQKQSVKLMRPVESKDEWFNILVLHQNRVAH 252
Query: 229 GTVKNIAEDSIPSFFHFILWGHEHECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKK 288
+ E I SF F+LWGHEHEC + P+ ++ FH+ QPGS VAT+L GE+ K
Sbjct: 253 NPKNYVHEKMIESFIDFVLWGHEHECLVNPQASSVGEFHISQPGSSVATALSEGESKDKF 312
Query: 289 CGILMCNKQNYKLVPRSLETVRPFV 313
G+L K ++ P L TVRPF+
Sbjct: 313 VGLLEVYKNQFRFKPFPLNTVRPFI 337
>MGI|MGI:1100512 [details] [associations]
symbol:Mre11a "meiotic recombination 11 homolog A (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0000075 "cell cycle
checkpoint" evidence=IMP] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007129 "synapsis"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030145
"manganese ion binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=ISO] [GO:0031954 "positive regulation of protein
autophosphorylation" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=ISO] [GO:0033674 "positive regulation
of kinase activity" evidence=ISO] [GO:0048471 "perinuclear region
of cytoplasm" evidence=ISO] [GO:0051276 "chromosome organization"
evidence=IMP] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
MGI:MGI:1100512 GO:GO:0005634 GO:GO:0048471 GO:GO:0005654
GO:GO:0007507 GO:GO:0003677 GO:GO:0008283 GO:GO:0030145
GO:GO:0000790 GO:GO:0004003 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0000794 GO:GO:0004519 GO:GO:0032876
GO:GO:0000781 GO:GO:0000075 GO:GO:0007129 GO:GO:0007062
GO:GO:0031954 eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865
OMA:FVNKQVT PANTHER:PTHR10139 TIGRFAMs:TIGR00583
GeneTree:ENSGT00390000017288 CTD:4361 HOVERGEN:HBG052508
OrthoDB:EOG46WZ82 GO:GO:0033674 EMBL:U58987 EMBL:U60318
EMBL:BC065144 IPI:IPI00118853 IPI:IPI00283379 RefSeq:NP_061206.1
UniGene:Mm.149071 ProteinModelPortal:Q61216 SMR:Q61216
IntAct:Q61216 STRING:Q61216 PhosphoSite:Q61216 PaxDb:Q61216
PRIDE:Q61216 Ensembl:ENSMUST00000034405 Ensembl:ENSMUST00000115632
GeneID:17535 KEGG:mmu:17535 InParanoid:Q61216 NextBio:292160
PMAP-CutDB:Q61216 Bgee:Q61216 Genevestigator:Q61216
GermOnline:ENSMUSG00000031928 Uniprot:Q61216
Length = 706
Score = 773 (277.2 bits), Expect = 9.0e-77, P = 9.0e-77
Identities = 149/302 (49%), Positives = 208/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I++A+DIHLG++E D RGND+FV+F+EIL AL+ EVD +LLGGDLFH NKP
Sbjct: 8 DDEDTFKILVATDIHLGFMEKDAVRGNDTFVTFDEILRLALENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +VISD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHSCLELLRKYCMGDRPVQFEVISDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALD++S +G VN+FG+ ++ ++ ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSMSVEKVDISPVLLQKGSTKLALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGNTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L K N + +P L TVR
Sbjct: 248 ECKIGPIKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQKLP--LRTVR 305
Query: 311 PF 312
F
Sbjct: 306 RF 307
>UNIPROTKB|B3KTC7 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
HOGENOM:HOG000216581 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 HOVERGEN:HBG052508 UniGene:Hs.192649
HGNC:HGNC:7230 ChiTaRS:MRE11A EMBL:AP000765 EMBL:AP000786
EMBL:AK095388 IPI:IPI00029159 SMR:B3KTC7 STRING:B3KTC7
Ensembl:ENST00000407439 UCSC:uc009ywj.2 Uniprot:B3KTC7
Length = 711
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 147/302 (48%), Positives = 206/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 11 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 70
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 71 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 130
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 131 NHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 190
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G+ I E + F ++WGHEH
Sbjct: 191 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEH 250
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F++ QPGS V TSL GEAV+K G+L K N +P L TVR
Sbjct: 251 ECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP--LHTVR 308
Query: 311 PF 312
F
Sbjct: 309 QF 310
>UNIPROTKB|F8W7U8 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 HGNC:HGNC:7230 ChiTaRS:MRE11A
EMBL:AP000765 EMBL:AP000786 IPI:IPI01011534
ProteinModelPortal:F8W7U8 SMR:F8W7U8 PRIDE:F8W7U8
Ensembl:ENST00000393241 ArrayExpress:F8W7U8 Bgee:F8W7U8
Uniprot:F8W7U8
Length = 707
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 147/302 (48%), Positives = 206/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G+ I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F++ QPGS V TSL GEAV+K G+L K N +P L TVR
Sbjct: 248 ECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP--LHTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>UNIPROTKB|P49959 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0007129 "synapsis" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0000014 "single-stranded DNA specific endodeoxyribonuclease
activity" evidence=TAS] [GO:0000019 "regulation of mitotic
recombination" evidence=TAS] [GO:0003690 "double-stranded DNA
binding" evidence=TAS] [GO:0004520 "endodeoxyribonuclease activity"
evidence=TAS] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007004 "telomere maintenance via
telomerase" evidence=TAS] [GO:0008408 "3'-5' exonuclease activity"
evidence=TAS] [GO:0006974 "response to DNA damage stimulus"
evidence=IDA] [GO:0030870 "Mre11 complex" evidence=NAS;IDA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0000781 "chromosome,
telomeric region" evidence=IDA] [GO:0031954 "positive regulation of
protein autophosphorylation" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0033674 "positive regulation of kinase
activity" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
evidence=IMP] [GO:0004518 "nuclease activity" evidence=TAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0090305 "nucleic acid phosphodiester bond
hydrolysis" evidence=TAS] Reactome:REACT_216 InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0048471
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0007507 GO:GO:0008283 GO:GO:0030145 GO:GO:0000790
Reactome:REACT_111183 GO:GO:0003690 GO:GO:0000724 GO:GO:0000794
GO:GO:0032876 GO:GO:0008408 Pathway_Interaction_DB:bard1pathway
GO:GO:0007131 GO:GO:0006303 GO:GO:0000075 GO:GO:0007004
Orphanet:145 GO:GO:0000014 GO:GO:0007129 GO:GO:0032508
GO:GO:0007062 GO:GO:0031954 eggNOG:COG0420 HOGENOM:HOG000216581
KO:K10865 PANTHER:PTHR10139 TIGRFAMs:TIGR00583 CTD:4361
HOVERGEN:HBG052508 EMBL:U37359 EMBL:AF022778 EMBL:AF073362
EMBL:AF303395 EMBL:AF303379 EMBL:AF303380 EMBL:AF303381
EMBL:AF303382 EMBL:AF303383 EMBL:AF303384 EMBL:AF303385
EMBL:AF303386 EMBL:AF303387 EMBL:AF303388 EMBL:AF303389
EMBL:AF303390 EMBL:AF303391 EMBL:AF303392 EMBL:AF303393
EMBL:AF303394 EMBL:AY584241 EMBL:BC063458 IPI:IPI00218853
IPI:IPI00940798 RefSeq:NP_005581.2 RefSeq:NP_005582.1
UniGene:Hs.192649 PDB:3T1I PDBsum:3T1I ProteinModelPortal:P49959
SMR:P49959 DIP:DIP-33238N IntAct:P49959 MINT:MINT-131851
STRING:P49959 PhosphoSite:P49959 DMDM:17380137 PaxDb:P49959
PRIDE:P49959 DNASU:4361 Ensembl:ENST00000323929
Ensembl:ENST00000323977 GeneID:4361 KEGG:hsa:4361 UCSC:uc001peu.2
UCSC:uc001pev.2 GeneCards:GC11M094150 HGNC:HGNC:7230 HPA:CAB004081
HPA:HPA002691 MIM:600814 MIM:604391 neXtProt:NX_P49959
Orphanet:251347 PharmGKB:PA30934 InParanoid:P49959 PhylomeDB:P49959
ChiTaRS:MRE11A GenomeRNAi:4361 NextBio:17163 PMAP-CutDB:P49959
ArrayExpress:P49959 Bgee:P49959 CleanEx:HS_MRE11A
Genevestigator:P49959 GermOnline:ENSG00000020922 GO:GO:0030870
GO:GO:0033674 GO:GO:0000019 Uniprot:P49959
Length = 708
Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
Identities = 147/302 (48%), Positives = 206/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G+ I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F++ QPGS V TSL GEAV+K G+L K N +P L TVR
Sbjct: 248 ECKIAPTKNEQQLFYISQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMHKIP--LHTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>UNIPROTKB|E1BIN9 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0033674 "positive regulation of kinase activity"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0031954 "positive regulation
of protein autophosphorylation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0003677 GO:GO:0008283 GO:GO:0030145 GO:GO:0004003
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000075 GO:GO:0007129
GO:GO:0007062 GO:GO:0031954 KO:K10865 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 CTD:4361
GO:GO:0033674 EMBL:DAAA02039761 EMBL:DAAA02039762 EMBL:DAAA02039763
EMBL:DAAA02039764 EMBL:DAAA02039765 IPI:IPI00695059
RefSeq:NP_001179534.1 UniGene:Bt.28672 Ensembl:ENSBTAT00000011748
GeneID:525093 KEGG:bta:525093 NextBio:20874093 Uniprot:E1BIN9
Length = 708
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 147/302 (48%), Positives = 207/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + +VD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENDVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISVPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G+ I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L K N + +P L TVR
Sbjct: 248 ECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHIGLLRIKGRKMNMQKIP--LRTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>UNIPROTKB|E2RTK8 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007126 "meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288
EMBL:AAEX03012721 Ensembl:ENSCAFT00000006686 Uniprot:E2RTK8
Length = 708
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 146/302 (48%), Positives = 206/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND++V+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTYVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALD++S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGNTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L K N + +P L TVR
Sbjct: 248 ECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQKIP--LNTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>UNIPROTKB|F1PUK4 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007126 "meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0007126 GO:GO:0030145
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519 KO:K10865
OMA:FVNKQVT PANTHER:PTHR10139 TIGRFAMs:TIGR00583
GeneTree:ENSGT00390000017288 CTD:4361 EMBL:AAEX03012721
RefSeq:XP_542244.2 Ensembl:ENSCAFT00000006688 GeneID:494006
KEGG:cfa:494006 Uniprot:F1PUK4
Length = 708
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 146/302 (48%), Positives = 206/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND++V+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTYVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALD++S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGNTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L K N + +P L TVR
Sbjct: 248 ECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQKIP--LNTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>RGD|69263 [details] [associations]
symbol:Mre11a "MRE11 meiotic recombination 11 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000075 "cell
cycle checkpoint" evidence=IEA;ISO;TAS] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0000781 "chromosome, telomeric
region" evidence=IEA;ISO] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA;ISO]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0004527
"exonuclease activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006302 "double-strand
break repair" evidence=IEA;ISO;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007062 "sister chromatid
cohesion" evidence=IEA;ISO] [GO:0007129 "synapsis" evidence=IEA;ISO]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0007507 "heart development" evidence=IEP] [GO:0008022 "protein
C-terminus binding" evidence=IEA;ISO] [GO:0008283 "cell
proliferation" evidence=IEA;ISO] [GO:0030145 "manganese ion binding"
evidence=IEA] [GO:0030870 "Mre11 complex" evidence=ISO;TAS]
[GO:0031954 "positive regulation of protein autophosphorylation"
evidence=IEA;ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0032876 "negative regulation of DNA endoreduplication"
evidence=IEA;ISO] [GO:0033674 "positive regulation of kinase
activity" evidence=IEA;ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051276 "chromosome organization"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 RGD:69263 GO:GO:0048471
GO:GO:0005654 GO:GO:0007507 GO:GO:0003677 GO:GO:0008283
GO:GO:0030145 GO:GO:0000790 GO:GO:0004003 GO:GO:0004527
GO:GO:0006302 GO:GO:0090305 GO:GO:0000794 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000723 GO:GO:0007131
GO:GO:0000075 GO:GO:0007129 GO:GO:0007062 GO:GO:0031954
eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 CTD:4361 HOVERGEN:HBG052508 OrthoDB:EOG46WZ82
GO:GO:0030870 GO:GO:0033674 EMBL:AF218574 IPI:IPI00200709
RefSeq:NP_071615.1 UniGene:Rn.209040 ProteinModelPortal:Q9JIM0
STRING:Q9JIM0 PhosphoSite:Q9JIM0 PRIDE:Q9JIM0 GeneID:64046
KEGG:rno:64046 UCSC:RGD:69263 InParanoid:Q9JIM0 NextBio:612709
ArrayExpress:Q9JIM0 Genevestigator:Q9JIM0
GermOnline:ENSRNOG00000009506 Uniprot:Q9JIM0
Length = 706
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 146/302 (48%), Positives = 208/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I++A+DIHLG++E D RGND+FV+F+EIL AL+ EVD +LLGGDLFH NKP
Sbjct: 8 DDEDTFKILVATDIHLGFMEKDAVRGNDTFVTFDEILRLALENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V ++ISD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHSCLELLRKYCMGDRPVQFEIISDQSVNFGFSKFPWVNYRDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALD++S +G VN+FG+ ++ ++ ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSMSVEKVDISPVLLQKGSTKLALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G+ I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V T+L GE V+K G+L K N + +P L TVR
Sbjct: 248 ECKIGPTRNEQQLFYVSQPGSSVVTALSPGETVKKHVGLLRVKGRKMNMQKLP--LRTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>UNIPROTKB|Q9JIM0 [details] [associations]
symbol:Mre11a "Double-strand break repair protein MRE11A"
species:10116 "Rattus norvegicus" [GO:0004519 "endonuclease
activity" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 RGD:69263 GO:GO:0048471
GO:GO:0005654 GO:GO:0007507 GO:GO:0003677 GO:GO:0008283
GO:GO:0030145 GO:GO:0000790 GO:GO:0004003 GO:GO:0004527
GO:GO:0006302 GO:GO:0090305 GO:GO:0000794 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000723 GO:GO:0007131
GO:GO:0000075 GO:GO:0007129 GO:GO:0007062 GO:GO:0031954
eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 CTD:4361 HOVERGEN:HBG052508 OrthoDB:EOG46WZ82
GO:GO:0030870 GO:GO:0033674 EMBL:AF218574 IPI:IPI00200709
RefSeq:NP_071615.1 UniGene:Rn.209040 ProteinModelPortal:Q9JIM0
STRING:Q9JIM0 PhosphoSite:Q9JIM0 PRIDE:Q9JIM0 GeneID:64046
KEGG:rno:64046 UCSC:RGD:69263 InParanoid:Q9JIM0 NextBio:612709
ArrayExpress:Q9JIM0 Genevestigator:Q9JIM0
GermOnline:ENSRNOG00000009506 Uniprot:Q9JIM0
Length = 706
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 146/302 (48%), Positives = 208/302 (68%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD +T +I++A+DIHLG++E D RGND+FV+F+EIL AL+ EVD +LLGGDLFH NKP
Sbjct: 8 DDEDTFKILVATDIHLGFMEKDAVRGNDTFVTFDEILRLALENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V ++ISD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHSCLELLRKYCMGDRPVQFEIISDQSVNFGFSKFPWVNYRDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALD++S +G VN+FG+ ++ ++ ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDVLSCAGFVNHFGRSMSVEKVDISPVLLQKGSTKLALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + V+HQNR + G+ I E + F ++WGHEH
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNRSKHGSTNFIPEQFLDDFIDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V T+L GE V+K G+L K N + +P L TVR
Sbjct: 248 ECKIGPTRNEQQLFYVSQPGSSVVTALSPGETVKKHVGLLRVKGRKMNMQKLP--LRTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>UNIPROTKB|F1STJ9 [details] [associations]
symbol:MRE11A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033674 "positive regulation of kinase activity"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0031954 "positive regulation
of protein autophosphorylation" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000781
"chromosome, telomeric region" evidence=IEA] [GO:0000075 "cell
cycle checkpoint" evidence=IEA] [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0030145 "manganese ion binding" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0005634
GO:GO:0003677 GO:GO:0008283 GO:GO:0030145 GO:GO:0004003
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
GO:GO:0032876 GO:GO:0000781 GO:GO:0000075 GO:GO:0007129
GO:GO:0007062 GO:GO:0031954 KO:K10865 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 CTD:4361
GO:GO:0033674 EMBL:FP236710 RefSeq:XP_003129836.1
Ensembl:ENSSSCT00000016316 GeneID:100516687 KEGG:ssc:100516687
Uniprot:F1STJ9
Length = 714
Score = 766 (274.7 bits), Expect = 5.0e-76, P = 5.0e-76
Identities = 149/302 (49%), Positives = 205/302 (67%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+F + +EIL A + +VD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAIRGNDTFATLDEILGLAQENDVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V ++ISD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEIISDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +GL+N+FG+ ++ +I ++P+++QK TKVA++GLG + DE
Sbjct: 128 NHDDPTGADSLCALDILSCAGLINHFGRSMSVEKIDISPVLLQKGSTKVALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEH 252
RL M + KV ++P +D++ + + VLHQNR G I E + F ++WGHEH
Sbjct: 188 RLYRMFINKKVTMLRPKEDENSWFNLFVLHQNRSRHGRTNFIPEQFLDDFLDLVIWGHEH 247
Query: 253 ECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCN--KQNYKLVPRSLETVR 310
EC+I P N +Q F+V QPGS V TSL GEAV+K G+L K N + +P L TVR
Sbjct: 248 ECKIAPTKNEQQLFYVSQPGSSVVTSLSPGEAVKKHVGLLRIKGRKMNMQKIP--LHTVR 305
Query: 311 PF 312
F
Sbjct: 306 QF 307
>POMBASE|SPAC13C5.07 [details] [associations]
symbol:mre11 "Mre11 nuclease" species:4896
"Schizosaccharomyces pombe" [GO:0000014 "single-stranded DNA
specific endodeoxyribonuclease activity" evidence=TAS] [GO:0000077
"DNA damage checkpoint" evidence=IMP] [GO:0000723 "telomere
maintenance" evidence=IMP] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IGI] [GO:0000729 "DNA
double-strand break processing" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0006311 "meiotic gene
conversion" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IMP] [GO:0008310 "single-stranded DNA
specific 3'-5' exodeoxyribonuclease activity" evidence=TAS]
[GO:0008311 "double-stranded DNA specific 3'-5'
exodeoxyribonuclease activity" evidence=TAS] [GO:0030145 "manganese
ion binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=TAS] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=IMP] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=TAS] InterPro:IPR003701 InterPro:IPR004843
InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882
PomBase:SPAC13C5.07 EMBL:CU329670 GO:GO:0034613
GenomeReviews:CU329670_GR GO:GO:0030145 GO:GO:0000724 GO:GO:0008311
GO:GO:0000723 GO:GO:0007131 GO:GO:0006303 GO:GO:0000729
GO:GO:0031573 GO:GO:0042138 GO:GO:0000014 GO:GO:0006311
GO:GO:0008310 eggNOG:COG0420 HOGENOM:HOG000216581 KO:K10865
OMA:FVNKQVT PANTHER:PTHR10139 TIGRFAMs:TIGR00583 GO:GO:0030870
OrthoDB:EOG4P2T9Q PDB:4FBK PDB:4FBQ PDB:4FBW PDBsum:4FBK
PDBsum:4FBQ PDBsum:4FBW EMBL:X82322 PIR:S58097 RefSeq:NP_592935.1
PDB:4FCX PDBsum:4FCX ProteinModelPortal:Q09683 DIP:DIP-52388N
IntAct:Q09683 STRING:Q09683 EnsemblFungi:SPAC13C5.07.1
GeneID:2542757 KEGG:spo:SPAC13C5.07 NextBio:20803802 Uniprot:Q09683
Length = 649
Score = 753 (270.1 bits), Expect = 1.2e-74, P = 1.2e-74
Identities = 146/305 (47%), Positives = 205/305 (67%)
Query: 15 EYDDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHIN 74
E + NTIRI+I+SD H+GY E D RGNDSFVSF EILE A +++VDM+LLGGD+FH N
Sbjct: 11 ELHNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDN 70
Query: 75 KPSPTTLKKCLETLRKYCIGDRSVFIDVISDPKLV-----MCNDHVNYMDPNLNISLPVF 129
KPS L + L +LR C+GD+ ++++SD L +CN +NY+DPN+N+++PVF
Sbjct: 71 KPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCN--INYLDPNINVAIPVF 128
Query: 130 TINGNHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGY 189
+I+GNHDDPSG +ALDI+ +GLVNYFG+ + I ++P+++QK TK+A++G+
Sbjct: 129 SIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISN 188
Query: 190 VKDERLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNRPERGTVKNIAEDSIPSFFHFILW 248
V+DERL + + NKVK+++P +D + +L +HQN + E I F+ F+LW
Sbjct: 189 VRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFVLW 248
Query: 249 GHEHECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPRSLET 308
GHEHEC I YN Q+F V QPGS +ATSL GE K CGIL +++ L L T
Sbjct: 249 GHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRT 308
Query: 309 VRPFV 313
VRPF+
Sbjct: 309 VRPFI 313
>CGD|CAL0000164 [details] [associations]
symbol:MRE11 species:5476 "Candida albicans" [GO:0006281 "DNA
repair" evidence=IMP] [GO:0034599 "cellular response to oxidative
stress" evidence=IMP] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0006284 "base-excision repair" evidence=IEA]
[GO:0030437 "ascospore formation" evidence=IEA] [GO:0000727
"double-strand break repair via break-induced replication"
evidence=IEA] [GO:0000729 "DNA double-strand break processing"
evidence=IEA] [GO:0051037 "regulation of transcription during
meiosis" evidence=IEA] [GO:0031573 "intra-S DNA damage checkpoint"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IEA] [GO:0000723 "telomere
maintenance" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0003691 "double-stranded telomeric DNA binding"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=IEA]
[GO:0004017 "adenylate kinase activity" evidence=IEA] [GO:0004520
"endodeoxyribonuclease activity" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] [GO:0043047 "single-stranded
telomeric DNA binding" evidence=IEA] [GO:0051880 "G-quadruplex DNA
binding" evidence=IEA] [GO:0030870 "Mre11 complex" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 CGD:CAL0000164 GO:GO:0005634 GO:GO:0007126
GO:GO:0034599 GO:GO:0006281 GO:GO:0030145 GO:GO:0035690
GO:GO:0004527 GO:GO:0006302 GO:GO:0090305 GO:GO:0004519
EMBL:AACQ01000156 eggNOG:COG0420 KO:K10865 PANTHER:PTHR10139
TIGRFAMs:TIGR00583 RefSeq:XP_712486.1 RefSeq:XP_888757.1
ProteinModelPortal:Q59S37 STRING:Q59S37 DNASU:3704159
GeneID:3645898 GeneID:3704159 KEGG:cal:CaO19.6915
KEGG:cal:CaO19_6915 Uniprot:Q59S37
Length = 682
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 133/297 (44%), Positives = 198/297 (66%)
Query: 20 NTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKPSPT 79
+TIR+++ +D H+G E D RG+D++ +F+EI A D++VDM++ GGDLFHINKP+
Sbjct: 12 DTIRVLLTTDNHVGAFENDPIRGDDAWKTFDEITTIAKDKDVDMIIQGGDLFHINKPTKK 71
Query: 80 TLKKCLETLRKYCIGDRSVFIDVISDPKLVMCN--DHVNYMDPNLNISLPVFTINGNHDD 137
++ +++LR C+GDR ++++SDP + N D +NY DPNLNIS+PVF I+GNHDD
Sbjct: 72 SMYHVMKSLRSNCMGDRPCELELLSDPAQSLNNGFDEINYEDPNLNISIPVFAISGNHDD 131
Query: 138 PSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDERLCN 197
+G L++ALD+++ +GL+N FGK N IT++P+++QK +TK+A++G+ V+DERL
Sbjct: 132 ATGESLLSALDVLAVTGLINNFGKVKNTEAITVSPILLQKGQTKLALYGMSNVRDERLHR 191
Query: 198 MIKHNKVKYMKPT-DDKDIIYILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEHECRI 256
+ + VK+ +P +D + V+HQN +I E +P+F FILWGHEHEC
Sbjct: 192 LFRDGGVKFQRPNIQTEDWFNLFVIHQNHAAHTYTSSIPESFLPNFLDFILWGHEHECIP 251
Query: 257 KPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPRSLETVRPFV 313
P +N + F V Q GS VATSL GE KK IL ++Y + P L+TVRPFV
Sbjct: 252 YPVHNPETTFDVLQAGSSVATSLAEGEVADKKIFILNIKGKDYSIEPVELKTVRPFV 308
>UNIPROTKB|Q59S37 [details] [associations]
symbol:MRE11 "Putative uncharacterized protein MRE11"
species:237561 "Candida albicans SC5314" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0034599 "cellular response to oxidative stress"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 CGD:CAL0000164
GO:GO:0005634 GO:GO:0007126 GO:GO:0034599 GO:GO:0006281
GO:GO:0030145 GO:GO:0035690 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0004519 EMBL:AACQ01000156 eggNOG:COG0420
KO:K10865 PANTHER:PTHR10139 TIGRFAMs:TIGR00583 RefSeq:XP_712486.1
RefSeq:XP_888757.1 ProteinModelPortal:Q59S37 STRING:Q59S37
DNASU:3704159 GeneID:3645898 GeneID:3704159 KEGG:cal:CaO19.6915
KEGG:cal:CaO19_6915 Uniprot:Q59S37
Length = 682
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 133/297 (44%), Positives = 198/297 (66%)
Query: 20 NTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKPSPT 79
+TIR+++ +D H+G E D RG+D++ +F+EI A D++VDM++ GGDLFHINKP+
Sbjct: 12 DTIRVLLTTDNHVGAFENDPIRGDDAWKTFDEITTIAKDKDVDMIIQGGDLFHINKPTKK 71
Query: 80 TLKKCLETLRKYCIGDRSVFIDVISDPKLVMCN--DHVNYMDPNLNISLPVFTINGNHDD 137
++ +++LR C+GDR ++++SDP + N D +NY DPNLNIS+PVF I+GNHDD
Sbjct: 72 SMYHVMKSLRSNCMGDRPCELELLSDPAQSLNNGFDEINYEDPNLNISIPVFAISGNHDD 131
Query: 138 PSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDERLCN 197
+G L++ALD+++ +GL+N FGK N IT++P+++QK +TK+A++G+ V+DERL
Sbjct: 132 ATGESLLSALDVLAVTGLINNFGKVKNTEAITVSPILLQKGQTKLALYGMSNVRDERLHR 191
Query: 198 MIKHNKVKYMKPT-DDKDIIYILVLHQNRPERGTVKNIAEDSIPSFFHFILWGHEHECRI 256
+ + VK+ +P +D + V+HQN +I E +P+F FILWGHEHEC
Sbjct: 192 LFRDGGVKFQRPNIQTEDWFNLFVIHQNHAAHTYTSSIPESFLPNFLDFILWGHEHECIP 251
Query: 257 KPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPRSLETVRPFV 313
P +N + F V Q GS VATSL GE KK IL ++Y + P L+TVRPFV
Sbjct: 252 YPVHNPETTFDVLQAGSSVATSLAEGEVADKKIFILNIKGKDYSIEPVELKTVRPFV 308
>TAIR|locus:2162615 [details] [associations]
symbol:MRE11 "MEIOTIC RECOMBINATION 11" species:3702
"Arabidopsis thaliana" [GO:0004519 "endonuclease activity"
evidence=IEA] [GO:0004527 "exonuclease activity" evidence=IEA]
[GO:0004722 "protein serine/threonine phosphatase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0000785 "chromatin" evidence=IDA] [GO:0000791 "euchromatin"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
InterPro:IPR003701 InterPro:IPR004843 InterPro:IPR007281
Pfam:PF00149 Pfam:PF04152 PIRSF:PIRSF000882 GO:GO:0007126
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030145 GO:GO:0004527
GO:GO:0006302 GO:GO:0090305 EMBL:AB010695 GO:GO:0004519
GO:GO:0000795 GO:GO:0000791 EMBL:AJ243822 IPI:IPI00542175
PIR:T52564 RefSeq:NP_200237.1 UniGene:At.493
ProteinModelPortal:Q9XGM2 SMR:Q9XGM2 STRING:Q9XGM2 PaxDb:Q9XGM2
PRIDE:Q9XGM2 EnsemblPlants:AT5G54260.1 GeneID:835514
KEGG:ath:AT5G54260 GeneFarm:4831 TAIR:At5g54260 eggNOG:COG0420
HOGENOM:HOG000216581 InParanoid:Q9XGM2 KO:K10865 OMA:FVNKQVT
PhylomeDB:Q9XGM2 ProtClustDB:CLSN2686743 Genevestigator:Q9XGM2
GermOnline:AT5G54260 PANTHER:PTHR10139 TIGRFAMs:TIGR00583
Uniprot:Q9XGM2
Length = 720
Score = 686 (246.5 bits), Expect = 1.5e-67, P = 1.5e-67
Identities = 142/308 (46%), Positives = 199/308 (64%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
D +T+R+++A+D HLGY+E D R +DSF +FEEI A +++VD +LLGGDLFH NKP
Sbjct: 5 DFSDTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHENKP 64
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCN--DHVNYMDPNLNISLPVFTINGN 134
S TTL K +E LR++C+ D+ V V+SD + N VNY DP+ N+ LPVF+I+GN
Sbjct: 65 SRTTLVKAIEILRRHCLNDKPVQFQVVSDQTVNFQNAFGQVNYEDPHFNVGLPVFSIHGN 124
Query: 135 HDDPSGPELVAALDIVSNSGLVNYFGKC----TNLNEITLNPLIIQKNETKVAIFGLGYV 190
HDDP+G + ++A+DI+S LVNYFGK + + +ITL P++++K T VA++GLG +
Sbjct: 125 HDDPAGVDNLSAIDILSACNLVNYFGKMVLGGSGVGQITLYPILMKKGSTTVALYGLGNI 184
Query: 191 KDERLCNMIKH-NKVKYMKPT-----DDKDIIYILVLHQNRPERGTVKNIAEDSIPSFFH 244
+DERL M + + V++M+P D D ILVLHQNR + I+E +P F
Sbjct: 185 RDERLNRMFQTPHAVQWMRPEVQEGCDVSDWFNILVLHQNRVKSNPKNAISEHFLPRFLD 244
Query: 245 FILWGHEHECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNKQNYKLVPR 304
FI+WGHEHEC I P+ + FH+ QPGS VATSL GE+ K +L Y+
Sbjct: 245 FIVWGHEHECLIDPQEVSGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGNQYRPTKI 304
Query: 305 SLETVRPF 312
L +VRPF
Sbjct: 305 PLTSVRPF 312
>WB|WBGene00003405 [details] [associations]
symbol:mre-11 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0004527 "exonuclease
activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0030145 "manganese
ion binding" evidence=IEA] [GO:0019915 "lipid storage"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0051729 "germline cell cycle
switching, mitotic to meiotic cell cycle" evidence=IMP] [GO:0045132
"meiotic chromosome segregation" evidence=IMP] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 GO:GO:0005634 GO:GO:0009792 GO:GO:0051729
GO:GO:0030145 GO:GO:0019915 GO:GO:0004527 GO:GO:0006302
GO:GO:0090305 GO:GO:0045132 GO:GO:0004519 eggNOG:COG0420 KO:K10865
PANTHER:PTHR10139 TIGRFAMs:TIGR00583 EMBL:Z73978 PIR:T27512
RefSeq:NP_505736.2 ProteinModelPortal:Q23255 SMR:Q23255
IntAct:Q23255 MINT:MINT-226668 STRING:Q23255 PaxDb:Q23255
EnsemblMetazoa:ZC302.1.1 EnsemblMetazoa:ZC302.1.2 GeneID:179488
KEGG:cel:CELE_ZC302.1 UCSC:ZC302.1.1 CTD:179488 WormBase:ZC302.1
GeneTree:ENSGT00390000017288 HOGENOM:HOG000018843 InParanoid:Q23255
OMA:PSREVQH NextBio:905614 GermOnline:ZC302.1 Uniprot:Q23255
Length = 728
Score = 646 (232.5 bits), Expect = 2.6e-63, P = 2.6e-63
Identities = 129/316 (40%), Positives = 195/316 (61%)
Query: 12 EEVEYDD-RNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDL 70
+E +D+ + I+I++A+DIH GY E D+ +FEE+L+ A +Q+VDM+LLGGDL
Sbjct: 55 DEPAHDESEDIIKILVATDIHCGYGENKANIHMDAVNTFEEVLQIATEQKVDMILLGGDL 114
Query: 71 FHINKPSPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCND---HVNYMDPNLNISLP 127
FH N PS + + LR+YC+ + ++ +SD + HVNY D NLN+ LP
Sbjct: 115 FHENNPSREVQHRVTQLLRQYCLNGNPIALEFLSDASVNFNQSVFGHVNYYDQNLNVGLP 174
Query: 128 VFTINGNHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGL 187
+FTI+GNHDD SG L A LD++ SGLVN FGK +N+ E ++P++++K ET++A++G+
Sbjct: 175 IFTIHGNHDDLSGKGLTA-LDLLHESGLVNLFGKHSNIQEFIVSPILLRKGETRLALYGI 233
Query: 188 GYVKDERLCNMIKHNKVKYMKPTDD-KDIIYILVLHQNRPERGTVKN----IAEDSIPSF 242
G +D+RL K+N + +++P +D + VLHQNRP R ++ + E IP F
Sbjct: 234 GSQRDDRLVRAFKNNSISFLRPNAGAEDWFNLFVLHQNRPRRAMHRSTGNFLPESLIPQF 293
Query: 243 FHFILWGHEHECRIKPEYNTKQR-----FHVCQPGSPVATSLCAGEAVQKKCGILMCNKQ 297
F ++WGHEHEC+ P+Y F++ QPGS VATSL EA+QK ++ +
Sbjct: 294 FDLLIWGHEHECKPDPQYVASSEAVGDGFYILQPGSTVATSLTPEEALQKNAFLIKIKGR 353
Query: 298 NYKLVPRSLETVRPFV 313
+ P L+TVRP V
Sbjct: 354 KFASKPIPLQTVRPMV 369
>SGD|S000004837 [details] [associations]
symbol:MRE11 "Subunit of the MRX complex with Rad50p and
Xrs2p" species:4932 "Saccharomyces cerevisiae" [GO:0004519
"endonuclease activity" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=TAS] [GO:0000706 "meiotic DNA double-strand
break processing" evidence=TAS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0004017 "adenylate kinase activity" evidence=IDA]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=IGI;IMP] [GO:0008408 "3'-5' exonuclease
activity" evidence=IDA] [GO:0042162 "telomeric DNA binding"
evidence=IDA] [GO:0004520 "endodeoxyribonuclease activity"
evidence=IDA] [GO:0006303 "double-strand break repair via
nonhomologous end joining" evidence=IMP] [GO:0030870 "Mre11
complex" evidence=IPI] [GO:0051037 "regulation of transcription
during meiosis" evidence=IMP] [GO:0030437 "ascospore formation"
evidence=IMP] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IDA]
[GO:0004527 "exonuclease activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030145 "manganese ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IGI;IMP]
[GO:0006284 "base-excision repair" evidence=IMP] [GO:0006281 "DNA
repair" evidence=IEA;IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 InterPro:IPR007281 Pfam:PF00149 Pfam:PF04152
PIRSF:PIRSF000882 SGD:S000004837 GO:GO:0005739 GO:GO:0005654
GO:GO:0006284 EMBL:BK006946 GO:GO:0030145 GO:GO:0032947
GO:GO:0030437 GO:GO:0004520 GO:GO:0000706 GO:GO:0006303 EMBL:Z49939
GO:GO:0051880 GO:GO:0042138 GO:GO:0043047 GO:GO:0000727
Reactome:REACT_128851 GO:GO:0008296 eggNOG:COG0420
HOGENOM:HOG000216581 KO:K10865 OMA:FVNKQVT PANTHER:PTHR10139
TIGRFAMs:TIGR00583 GeneTree:ENSGT00390000017288 GO:GO:0030870
EMBL:D11463 EMBL:U60829 PIR:S57592 RefSeq:NP_013951.1
ProteinModelPortal:P32829 SMR:P32829 DIP:DIP-1313N IntAct:P32829
MINT:MINT-388080 STRING:P32829 PaxDb:P32829 EnsemblFungi:YMR224C
GeneID:855264 KEGG:sce:YMR224C CYGD:YMR224c OrthoDB:EOG4P2T9Q
NextBio:978864 Genevestigator:P32829 GermOnline:YMR224C
GO:GO:0003691 GO:GO:0051037 Uniprot:P32829
Length = 692
Score = 632 (227.5 bits), Expect = 7.9e-62, P = 7.9e-62
Identities = 131/304 (43%), Positives = 186/304 (61%)
Query: 14 VEYDDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHI 73
++Y D +TIRI+I +D H+GY E D G+DS+ +F E++ A + VDMV+ GDLFH+
Sbjct: 1 MDYPDPDTIRILITTDNHVGYNENDPITGDDSWKTFHEVMMLAKNNNVDMVVQSGDLFHV 60
Query: 74 NKPSPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCND---HVNYMDPNLNISLPVFT 130
NKPS +L + L+TLR C+GD+ ++++SDP V D +VNY DPN NIS+PVF
Sbjct: 61 NKPSKKSLYQVLKTLRLCCMGDKPCELELLSDPSQVFHYDEFTNVNYEDPNFNISIPVFG 120
Query: 131 INGNHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYV 190
I+GNHDD SG L+ +DI+ +GL+N+FGK ++I + PL+ QK TK+A++GL V
Sbjct: 121 ISGNHDDASGDSLLCPMDILHATGLINHFGKVIESDKIKVVPLLFQKGSTKLALYGLAAV 180
Query: 191 KDERLCNMIKHNKVKYMKPT-DDKDIIYILVLHQNRPERGTVKNIAEDSIPSFFHFILWG 249
+DERL K V + PT + + ++ +HQN + E +P F ++WG
Sbjct: 181 RDERLFRTFKDGGVTFEVPTMREGEWFNLMCVHQNHTGHTNTAFLPEQFLPDFLDMVIWG 240
Query: 250 HEHECRIKPEYNTKQRFHVCQPGSPVATSLCAGEAVQKKCGILMCNK-QNYKLVPRSLET 308
HEHEC +N + F V QPGS VATSLC EA K IL + K+ P LET
Sbjct: 241 HEHECIPNLVHNPIKNFDVLQPGSSVATSLCEAEAQPKYVFILDIKYGEAPKMTPIPLET 300
Query: 309 VRPF 312
+R F
Sbjct: 301 IRTF 304
>UNIPROTKB|F5GXT0 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR003701 InterPro:IPR004843 Pfam:PF00149 GO:GO:0006259
GO:GO:0004527 PANTHER:PTHR10139 HGNC:HGNC:7230 ChiTaRS:MRE11A
EMBL:AP000765 EMBL:AP000786 IPI:IPI01012347
ProteinModelPortal:F5GXT0 SMR:F5GXT0 Ensembl:ENST00000540013
ArrayExpress:F5GXT0 Bgee:F5GXT0 Uniprot:F5GXT0
Length = 221
Score = 582 (209.9 bits), Expect = 1.6e-56, P = 1.6e-56
Identities = 108/213 (50%), Positives = 155/213 (72%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
Query: 134 NHDDPSGPELVAALDIVSNSGLVNYFGKCTNLNEITLNPLIIQKNETKVAIFGLGYVKDE 193
NHDDP+G + + ALDI+S +G VN+FG+ ++ +I ++P+++QK TK+A++GLG + DE
Sbjct: 128 NHDDPTGADALCALDILSCAGFVNHFGRSMSVEKIDISPVLLQKGSTKIALYGLGSIPDE 187
Query: 194 RLCNMIKHNKVKYMKPTDDKDIIY-ILVLHQNR 225
RL M + KV ++P +D++ + + V+HQNR
Sbjct: 188 RLYRMFVNKKVTMLRPKEDENSWFNLFVIHQNR 220
>UNIPROTKB|F5H256 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 Pfam:PF00149 GO:GO:0048471 GO:GO:0005654
GO:GO:0007507 GO:GO:0008283 GO:GO:0000790 GO:GO:0004527
GO:GO:0006302 GO:GO:0000794 GO:GO:0000075 GO:GO:0007129
PANTHER:PTHR10139 HGNC:HGNC:7230 ChiTaRS:MRE11A EMBL:AP000765
EMBL:AP000786 IPI:IPI01010110 ProteinModelPortal:F5H256 SMR:F5H256
Ensembl:ENST00000536754 ArrayExpress:F5H256 Bgee:F5H256
Uniprot:F5H256
Length = 127
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 68/120 (56%), Positives = 87/120 (72%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISDPKLVMCNDH---VNYMDPNLNISLPVFTING 133
S TL CLE LRKYC+GDR V +++SD + VNY D NLNIS+PVF+I+G
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHG 127
>UNIPROTKB|F5H742 [details] [associations]
symbol:MRE11A "Double-strand break repair protein MRE11A"
species:9606 "Homo sapiens" [GO:0004527 "exonuclease activity"
evidence=IEA] [GO:0000075 "cell cycle checkpoint" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006302 "double-strand
break repair" evidence=IEA] [GO:0007129 "synapsis" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] InterPro:IPR003701
InterPro:IPR004843 Pfam:PF00149 GO:GO:0048471 GO:GO:0005654
GO:GO:0007507 GO:GO:0008283 GO:GO:0000790 GO:GO:0004527
GO:GO:0006302 GO:GO:0000794 GO:GO:0000075 GO:GO:0007129
PANTHER:PTHR10139 HGNC:HGNC:7230 ChiTaRS:MRE11A EMBL:AP000765
EMBL:AP000786 IPI:IPI01009648 ProteinModelPortal:F5H742 SMR:F5H742
Ensembl:ENST00000538923 ArrayExpress:F5H742 Bgee:F5H742
Uniprot:F5H742
Length = 111
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 54/89 (60%), Positives = 69/89 (77%)
Query: 17 DDRNTIRIMIASDIHLGYLETDRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKP 76
DD NT +I++A+DIHLG++E D RGND+FV+ +EIL A + EVD +LLGGDLFH NKP
Sbjct: 8 DDENTFKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQENEVDFILLGGDLFHENKP 67
Query: 77 SPTTLKKCLETLRKYCIGDRSVFIDVISD 105
S TL CLE LRKYC+GDR V +++SD
Sbjct: 68 SRKTLHTCLELLRKYCMGDRPVQFEILSD 96
>UNIPROTKB|Q8U1N9 [details] [associations]
symbol:mre11 "DNA double-strand break repair protein Mre11"
species:186497 "Pyrococcus furiosus DSM 3638" [GO:0042802
"identical protein binding" evidence=IPI] InterPro:IPR003701
InterPro:IPR004843 Pfam:PF00149 GO:GO:0046872 DrugBank:DB00171
GO:GO:0006281 GO:GO:0004527 GO:GO:0090305 GO:GO:0004519
EMBL:AE009950 GenomeReviews:AE009950_GR eggNOG:COG0420
PANTHER:PTHR10139 RefSeq:NP_578895.1 PDB:1II7 PDB:1S8E PDB:3DSC
PDB:3DSD PDB:3QKR PDB:3QKS PDB:3QKU PDB:4HD0 PDBsum:1II7
PDBsum:1S8E PDBsum:3DSC PDBsum:3DSD PDBsum:3QKR PDBsum:3QKS
PDBsum:3QKU PDBsum:4HD0 ProteinModelPortal:Q8U1N9 SMR:Q8U1N9
DIP:DIP-52386N PRIDE:Q8U1N9 EnsemblBacteria:EBPYRT00000005854
GeneID:1469035 KEGG:pfu:PF1166 HOGENOM:HOG000073890 OMA:RWDFGDY
ProtClustDB:CLSK541619 EvolutionaryTrace:Q8U1N9 Uniprot:Q8U1N9
Length = 426
Score = 141 (54.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 28 SDIHLGYLETDRERGNDSFV-SFEEILEQALDQEVDMVLLGGDLFHINKPSPTTLKKCLE 86
+DIHLGY + + + + F +F+ LE A+ + VD +L+ GDLFH ++PSP TLKK +
Sbjct: 7 ADIHLGYEQFHKPQREEEFAEAFKNALEIAVQENVDFILIAGDLFHSSRPSPGTLKKAIA 66
Query: 87 TLR 89
L+
Sbjct: 67 LLQ 69
Score = 84 (34.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 48/163 (29%), Positives = 69/163 (42%)
Query: 125 SLPVFTINGNHDDPS-GPELVAALDIVSNSGLVNYFG----KCTN---LNEITLNPLIIQ 176
S+PVF I GNHD GP + L+++ + GLV G K N +E N +
Sbjct: 75 SIPVFAIEGNHDRTQRGPSV---LNLLEDFGLVYVIGMRKEKVENEYLTSERLGNGEYLV 131
Query: 177 KNETK-VAIFGLGYVKDERLCNMIKHNKVKYMKPTDDKDIIYILVLHQNRPE----RGT- 230
K K + I G+ Y+ K + +PTD+ IL+LHQ E RG
Sbjct: 132 KGVYKDLEIHGMKYMSSAWF-EANKEILKRLFRPTDNA----ILMLHQGVREVSEARGED 186
Query: 231 VKNIAEDSIPSFFHFILWGHEHECRIKPEYNTKQRFHVCQPGS 273
I +P + + GH H+ R + Y+ V PGS
Sbjct: 187 YFEIGLGDLPEGYLYYALGHIHK-RYETSYSGSP---VVYPGS 225
>TIGR_CMR|GSU_1724 [details] [associations]
symbol:GSU_1724 "nuclease SbcCD, D subunit, putative"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004527
"exonuclease activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004527
InterPro:IPR024654 Pfam:PF12850 RefSeq:NP_952774.1
ProteinModelPortal:Q74CF0 GeneID:2685333 KEGG:gsu:GSU1724
PATRIC:22026295 HOGENOM:HOG000065085 OMA:HDWIHRR
ProtClustDB:CLSK924531 BioCyc:GSUL243231:GH27-1676-MONOMER
Uniprot:Q74CF0
Length = 418
Score = 107 (42.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 23 RIMIASDIHLG--YLET--DRERGNDSFVSFEEILEQALDQEVDMVLLGGDLFHINKPSP 78
R +DIHLG Y + + ER D F I+ A+ VD VL+ GDLFH + P
Sbjct: 5 RFFHTADIHLGKTYRTSTGEAERYEDFFRMLGSIVSDAIAARVDFVLIAGDLFHTGQILP 64
Query: 79 TTLKKCLETLR 89
T + +ETL+
Sbjct: 65 RTFARTIETLQ 75
Score = 83 (34.3 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 35/169 (20%), Positives = 73/169 (43%)
Query: 115 VNYMDPNLNISLPVFTINGNHDDPSGPELVAALDIVSNSGLVNYFGKC-TNLNEITLNPL 173
+ + P N +P + GNHD + ++ ++ +S G ++ T +P
Sbjct: 71 IETLQPLKNAGIPCIAVEGNHDWIHRRDSISWMEALSQMGYIHLLRPSRTETGGYRFSPF 130
Query: 174 IIQKN-----ETK-VAIFGLGYVKDERLCNMIKHNKVKYMKPTDDKDIIYILVLHQNRPE 227
++ E V I+GLGY+ + ++ + + + T++ + ++ V + E
Sbjct: 131 DYEQGMGGHIEVNGVNIYGLGYIGTQAGAHVARICEA--ITTTNNILLFHVGVWTYSPVE 188
Query: 228 RGTVKNIAEDSIP--SFFHFILWGHEHECRIKPEYNTKQRFHVCQPGSP 274
G +K E+++P F ++ GH H+ I + R + PGSP
Sbjct: 189 IGNMK--PEEALPLADVFDYVALGHGHKPYIIA--TPEGRAYAFNPGSP 233
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 313 313 0.00081 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 27
No. of states in DFA: 594 (63 KB)
Total size of DFA: 227 KB (2125 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.39u 0.10s 26.49t Elapsed: 00:00:05
Total cpu time: 26.40u 0.10s 26.50t Elapsed: 00:00:05
Start: Thu Aug 15 14:50:31 2013 End: Thu Aug 15 14:50:36 2013