BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11948
(167 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|195028797|ref|XP_001987262.1| GH20064 [Drosophila grimshawi]
gi|193903262|gb|EDW02129.1| GH20064 [Drosophila grimshawi]
Length = 806
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 21/168 (12%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M++W IP +I+RAL ++G++ PT+IQ+M +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 196 MSKWQGMGIPTSIMRALAEQGYEAPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIP 255
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSG-KTLAFGIPILTGIVNKLENPTEEDE 119
IL+GI+ + ND GSG +T A + + + E PT ++
Sbjct: 256 ILSGIMEL------KQRND------------GSGIRTRAPKHKVEATV--EAEVPTSKEN 295
Query: 120 NDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
++ E + + EE ++ ++ R LYAL+L PTRELA+Q
Sbjct: 296 HELTPPPEELDYVSGASEEESDAEDYSSSGRRPLYALVLTPTRELAVQ 343
>gi|195429401|ref|XP_002062751.1| GK19535 [Drosophila willistoni]
gi|194158836|gb|EDW73737.1| GK19535 [Drosophila willistoni]
Length = 823
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/168 (37%), Positives = 95/168 (56%), Gaps = 21/168 (12%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ I+RAL +KGF+ PT+IQ+M +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 217 LSSWHGLGVPQPILRALAEKGFREPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIP 276
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI++ E +A+ I A + + K E P +DE+
Sbjct: 277 MLAGIMDLKER--------NAKHGIRKAPKVKGEDS------------QKSEEPPRDDEH 316
Query: 121 D-SGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ + EE + V +E+ ++ LYAL+L PTRELA+Q
Sbjct: 317 ELTPPPEELDHVSGASDEDDSDLENHSASRERPLYALVLTPTRELAVQ 364
>gi|195123017|ref|XP_002006006.1| GI18782 [Drosophila mojavensis]
gi|193911074|gb|EDW09941.1| GI18782 [Drosophila mojavensis]
Length = 819
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 24/169 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M +W +PE I+RAL + G++ PT+IQ+M +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 210 MTKWHGMGVPEPIMRALAELGYEAPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIP 269
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLEN--PTEED 118
IL+GI+ + +++ RK P + G +E PT+++
Sbjct: 270 ILSGIMEL----KQRNDDSGIRK-----------------APKVKGAQGPVEEAPPTKDN 308
Query: 119 ENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ EE + V +EES N + K R LYA++L PTRELA+Q
Sbjct: 309 HELTPSPEELDYVSGASDEESDNEHDPEAKQR-PLYAVVLTPTRELAVQ 356
>gi|20130173|ref|NP_611467.1| CG9143 [Drosophila melanogaster]
gi|7302399|gb|AAF57487.1| CG9143 [Drosophila melanogaster]
gi|33636633|gb|AAQ23614.1| LD11580p [Drosophila melanogaster]
Length = 813
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 95/167 (56%), Gaps = 25/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W +P +I+RAL ++GFKTPT+IQ++ +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 214 MSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIP 273
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + + R I A + + P ++L P EE ++
Sbjct: 274 MLAGIM--------ELKQRNIRSGIRKAPKVKGQQ------PEPAADEHELTPPPEELDH 319
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
SG +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 320 VSG-----------ASDEESDAEEQAQRVQTPLYGLVLTPTRELAVQ 355
>gi|195336062|ref|XP_002034666.1| GM19796 [Drosophila sechellia]
gi|194126636|gb|EDW48679.1| GM19796 [Drosophila sechellia]
Length = 814
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 25/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P +I+RAL ++GFKTPT+IQ++ +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 215 VSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIP 274
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + + R I A + + P ++L P EE ++
Sbjct: 275 MLAGIM--------ELKQRNIRSGIRKAPKVKGQQ------PEPAADEHELTPPPEELDH 320
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
SG +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 321 VSG-----------ASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQ 356
>gi|56201305|dbj|BAD72907.1| unnamed protein product [Drosophila simulans]
gi|56201324|dbj|BAD72925.1| unnamed protein product [Drosophila sechellia]
Length = 814
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 95/167 (56%), Gaps = 25/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P +I+RAL ++GFKTPT+IQ++ +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 215 VSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIP 274
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + + R I A + + P ++L P EE ++
Sbjct: 275 MLAGIM--------ELKQRNIRSGIRKAPKVKGQQ------PEPAADEHELTPPPEELDH 320
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
SG +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 321 VSG-----------ASDEESDAEEHTQRVQTPLYGLVLTPTRELAVQ 356
>gi|198458698|ref|XP_002138576.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
gi|198136429|gb|EDY69134.1| GA24853 [Drosophila pseudoobscura pseudoobscura]
Length = 807
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 24/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P I+RAL ++GFK PT+IQSM +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 207 LSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIHGKKDILGAAETGSGKTLAFGIP 266
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + +A I A + G PI P +DE+
Sbjct: 267 MLAGIM--------ELKQRNASSGIRKAPKVK-------GAPIA---------PPADDEH 302
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ + + + +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 303 ELTPPPDELDHVSGASDEDSDAEEREQRKQTPLYGLVLTPTRELAVQ 349
>gi|195154787|ref|XP_002018294.1| GL17630 [Drosophila persimilis]
gi|194114090|gb|EDW36133.1| GL17630 [Drosophila persimilis]
Length = 807
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 24/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P I+RAL ++GFK PT+IQSM +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 207 LSAWNGLGVPSNILRALAEQGFKAPTQIQSMTLPAAIHGKKDILGAAETGSGKTLAFGIP 266
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + +A I A + G PI P +DE+
Sbjct: 267 MLAGIM--------ELKQRNASSGIRKAPKVK-------GAPIA---------PPADDEH 302
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ + + + +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 303 ELTPPPDELDHVSGASDEDSDAEEREQRKQTPLYGLVLTPTRELAVQ 349
>gi|195382239|ref|XP_002049838.1| GJ21808 [Drosophila virilis]
gi|194144635|gb|EDW61031.1| GJ21808 [Drosophila virilis]
Length = 819
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 23/169 (13%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M +W +P I+RAL ++G++ PT+IQ+M +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 209 MTKWNGMGVPAPIMRALAEQGYEAPTQIQAMTLPAAIHGKKDILGAAETGSGKTLAFGIP 268
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
IL+GI+ + ++ RK P + G E P +D +
Sbjct: 269 ILSGIMEL----KQRNDGSCIRK-----------------APKVKGTQQVEEPPQSKDNH 307
Query: 121 DSGLEEEAEEV--LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ L EE+ + +E ++ E + LYA++L PTRELA+Q
Sbjct: 308 NHELTPPPEELDYVSGASDEESDAEEHNQGMGRPLYAVVLTPTRELAVQ 356
>gi|194881539|ref|XP_001974888.1| GG20872 [Drosophila erecta]
gi|190658075|gb|EDV55288.1| GG20872 [Drosophila erecta]
Length = 815
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 25/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P +I+RAL ++GFK PT+IQ++ +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 216 VSAWNGLGVPASILRALGEQGFKAPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIP 275
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + + R I A + + P ++L P EE ++
Sbjct: 276 MLAGIM--------ELKQRNIRSGIRKAPKVKGQQ------PEPAADEHELTPPPEELDH 321
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
SG +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 322 VSG-----------ASDEESDAEEHAQRMQTPLYGLVLTPTRELAVQ 357
>gi|340717162|ref|XP_003397056.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Bombus terrestris]
Length = 766
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/177 (38%), Positives = 94/177 (53%), Gaps = 32/177 (18%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W +P +I+AL + F PT IQ++ +P A+L +DI+GAAETGSGKTLAFGIPI+
Sbjct: 144 QWYMLGVPTPVIKALKDQQFHEPTPIQALTLPPAILGHRDILGAAETGSGKTLAFGIPII 203
Query: 63 TGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNK----LENPTEED 118
GI+ +L+N + + + FG I I NK EN E+
Sbjct: 204 NGIL-ELKNKQSQQSD------------------MEFGEEITGIIKNKGWICSENKMVEN 244
Query: 119 ENDSGLEEEAEEVLEELEEESANTTEFVK-----KTRNK---LYALILAPTRELAIQ 167
+N S E + EE +E L + + KT+N LYALIL PTRELAIQ
Sbjct: 245 DNSSS-ESDYEEHIEGLNKNGIGCVRVINNVKMSKTQNYTKPLYALILTPTRELAIQ 300
>gi|195486926|ref|XP_002091709.1| GE13811 [Drosophila yakuba]
gi|194177810|gb|EDW91421.1| GE13811 [Drosophila yakuba]
Length = 808
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 94/167 (56%), Gaps = 25/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P +I+RAL ++GFK PT+IQ++ +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 209 VSAWNGLGVPASILRALGEQGFKAPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIP 268
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + + R I A + + P ++L P EE ++
Sbjct: 269 MLAGIM--------ELKQRNIRSGIRKAPKVKGQQ------PEPAADEHELTPPPEELDH 314
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
SG +E ++ E ++ + LY L+L PTRELA+Q
Sbjct: 315 VSG-----------ASDEESDAEEQAQRIQTPLYGLVLTPTRELAVQ 350
>gi|194753466|ref|XP_001959033.1| GF12675 [Drosophila ananassae]
gi|190620331|gb|EDV35855.1| GF12675 [Drosophila ananassae]
Length = 813
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 23/167 (13%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P I+RAL ++GF PT+IQ++ +P+A+ +KDI+GAAETGSGKTLAFGIP
Sbjct: 212 VSAWNGLGVPAPILRALGEQGFSAPTQIQALTLPAAIHGKKDILGAAETGSGKTLAFGIP 271
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+L GI+ E + + + I A +T K A P +++
Sbjct: 272 MLAGIM--------ELKQRNVKSGIRKAPKTKGEKPAA--------------EPADDEHE 309
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ EE + V +EES + E ++ + LY L+L PTRELA+Q
Sbjct: 310 LTPPPEELDHVSGASDEES-DVEEHNQRMQRPLYGLVLTPTRELAVQ 355
>gi|350407757|ref|XP_003488184.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Bombus impatiens]
Length = 757
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P +I+AL + F PT IQ++ +P A+L +DI+GAAETGSGKTLAFGIPI+
Sbjct: 145 WYMLGVPTPVIKALKDQQFHEPTAIQALTLPPAILGHRDILGAAETGSGKTLAFGIPIIN 204
Query: 64 GIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSG 123
GI+ +L+N + + K+I G + G + EN E++N S
Sbjct: 205 GIL-ELKNKQSQQSDMEFGKEITGITK-NKGWICS-------------ENEMVENDNSSS 249
Query: 124 LEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ V+ + + + T + K LYALIL PTRELAIQ
Sbjct: 250 ESDCCVRVINNV--KMSKTQNYTK----PLYALILTPTRELAIQ 287
>gi|383856439|ref|XP_003703716.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Megachile
rotundata]
Length = 770
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 97/182 (53%), Gaps = 38/182 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + + II+A+ + F TPT IQ++ +P A++ +DI+GAAETGSGKTLAFGIP
Sbjct: 143 IQKWGRLGLYAPIIKAMKDQQFHTPTPIQALTLPPAIMGYRDILGAAETGSGKTLAFGIP 202
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP------ 114
I+ GI+ +L+N + D++D I + G N +EN
Sbjct: 203 IINGIL-ELKN-RQVDKSD---------------------IKPINGTGNNIENKGWICSD 239
Query: 115 TEEDENDSGLEEEAEEVLEELEEESANTTEFVKK---------TRNKLYALILAPTRELA 165
E ++DS E + EE ++++ E + + K + LYALIL PTRELA
Sbjct: 240 NEMKDDDSSSETDHEEDIDDVNENNIGCIRVIDKVKINEDEHYVKKPLYALILTPTRELA 299
Query: 166 IQ 167
IQ
Sbjct: 300 IQ 301
>gi|321458546|gb|EFX69612.1| hypothetical protein DAPPUDRAFT_300875 [Daphnia pulex]
Length = 621
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 93/174 (53%), Gaps = 9/174 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W +P+ I+RA+++ GF+TPT IQ +P+A+ RKDIVGAAETGSGKTLAFGIP
Sbjct: 38 MIIWKAMYLPDPIVRAVWELGFQTPTAIQLACLPTAMKGRKDIVGAAETGSGKTLAFGIP 97
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
IL GI+ E ++ + + + A+ G V K EED +
Sbjct: 98 ILNGILKDKEFELKKLKQNEEESEDSDDADDSDGNNDDGHTSNKKQRVEKKAAVAEEDSD 157
Query: 121 DSGLEEE-------AEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
DSG + E V + + E N + K + KL ALI+ PTRELA+Q
Sbjct: 158 DSGGQMEDFGGGIGRVRVFDVV--ELGNQKTKIIKGQKKLRALIITPTRELAVQ 209
>gi|157119653|ref|XP_001653437.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108875246|gb|EAT39471.1| AAEL008728-PA [Aedes aegypti]
Length = 813
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 94/180 (52%), Gaps = 50/180 (27%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W + + E I+RAL KGF+TPT+IQ++ +P A++ ++D++GAAETGSGKTLAFGIP+L
Sbjct: 215 KWTELGVSEPIVRALADKGFQTPTEIQTLSLPVAIMGKRDLLGAAETGSGKTLAFGIPLL 274
Query: 63 TGI----------VNKLEN--PTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNK 110
GI V K EN P EE++ + G T + L +
Sbjct: 275 EGIMKLKASEPYRVRKCENASPKEEEQRE-------GHEMTPPPEELEY----------- 316
Query: 111 LENPTEEDEN---DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+P+ D + LE+E + L++ LYALIL PTRELA+Q
Sbjct: 317 YPDPSNGDSSVMLQQNLEKEEDPQLDK-----------------PLYALILTPTRELAVQ 359
>gi|307190840|gb|EFN74688.1| ATP-dependent RNA helicase DDX24 [Camponotus floridanus]
Length = 739
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/168 (36%), Positives = 87/168 (51%), Gaps = 34/168 (20%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P +II+AL + F +PT IQ+ +P+A+L R+DI+GAAETGSGKTLAFGIPI+
Sbjct: 137 WSSMGVPTSIIKALADQNFHSPTAIQAQTLPAAILGRRDILGAAETGSGKTLAFGIPIIK 196
Query: 64 GIVN----KLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDE 119
GI++ +LE E+ K G +++E ED
Sbjct: 197 GILHLKKQQLEMSMSEESTKHKNK----------------------GSSSEIEARENEDI 234
Query: 120 NDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
++S E V+ ++ ++ LYALIL PTRELAIQ
Sbjct: 235 SES---ENCVHVVNNIKLDNCQNISI-----KPLYALILTPTRELAIQ 274
>gi|307201303|gb|EFN81150.1| ATP-dependent RNA helicase DDX24 [Harpegnathos saltator]
Length = 640
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 85/175 (48%), Gaps = 37/175 (21%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A W +P II+AL + F TPT IQ+ +P+ALL +DI+GAAETGSGKTLAFGIPI
Sbjct: 17 AAWSSMGVPSVIIKALADQNFYTPTIIQAKTLPAALLGYRDILGAAETGSGKTLAFGIPI 76
Query: 62 LTGIVN---------KLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 112
+ GI+ E TE EN+ + ET T
Sbjct: 77 IKGILELKSQKAKTIADEKSTETSENE---ERTCHEVETEDNST---------------- 117
Query: 113 NPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
N EDEN S E E + +E ++ LYALILAPTREL +Q
Sbjct: 118 NSDSEDENLS----EYENCINVIELDNCQNI-----PSKPLYALILAPTRELVVQ 163
>gi|158289761|ref|XP_311419.4| AGAP010702-PA [Anopheles gambiae str. PEST]
gi|157018482|gb|EAA07044.4| AGAP010702-PA [Anopheles gambiae str. PEST]
Length = 739
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 88/166 (53%), Gaps = 37/166 (22%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ + E I+RAL KGFK PT+IQ+ +P A+ R+D++GAAETGSGKTLAFGIP+L
Sbjct: 208 WVQLGVSEPIVRALADKGFKVPTEIQNKSLPVAIYGRRDLLGAAETGSGKTLAFGIPMLE 267
Query: 64 GIVN--KLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEND 121
GI++ K + P +D ++ +++ P+E D
Sbjct: 268 GIMHLKKGKKPVADDSSE-----------------------------HEMTPPSE----D 294
Query: 122 SGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ EE +V E + N++ LY LIL PTRELA+Q
Sbjct: 295 MEVTEEDAKVFAEEGRKLGNSS--AAPEDKPLYGLILTPTRELAVQ 338
>gi|156550634|ref|XP_001604682.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Nasonia
vitripennis]
Length = 636
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 90/169 (53%), Gaps = 21/169 (12%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P I AL ++ F +PT IQ++ +P A+L R+DI+GAAETGSGKTLAFGIP+L
Sbjct: 10 WSTLGVPSVITEALVEQNFYSPTAIQALALPPAILGRRDILGAAETGSGKTLAFGIPVLN 69
Query: 64 GI--VNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEE--DE 119
GI + K E T + + R E + A I G N P E+ D+
Sbjct: 70 GILELQKKEGKTVQSTSGKFR-------EVNKDEEAASDISDNEGDENDEPMPEEQSIDK 122
Query: 120 NDSGLEEEAEEV-LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
N GL + V +E + VK T+ LYALIL PTRELAIQ
Sbjct: 123 NGIGLVKVVNNVKFDEFDN--------VKPTK-PLYALILTPTRELAIQ 162
>gi|270010898|gb|EFA07346.1| hypothetical protein TcasGA2_TC015943 [Tribolium castaneum]
Length = 599
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 53/64 (82%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P++II+AL +GF PT IQS+ +P+A+L R+DIVGAAETGSGKTLAFG+PI+
Sbjct: 101 WSNFGLPDSIIKALVLQGFNEPTLIQSLSLPAAVLGRRDIVGAAETGSGKTLAFGLPIVA 160
Query: 64 GIVN 67
GI+N
Sbjct: 161 GILN 164
>gi|170053020|ref|XP_001862485.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
gi|167873707|gb|EDS37090.1| ATP-dependent RNA helicase DDX24 [Culex quinquefasciatus]
Length = 817
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 91/167 (54%), Gaps = 29/167 (17%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W + + E I+RAL KGF+ PT+IQ++ +P+A+L ++D++GAAETGSGKTLAFGIP+L
Sbjct: 222 KWTELGVSEPIVRALADKGFRQPTEIQTLSLPAAILGKRDLLGAAETGSGKTLAFGIPLL 281
Query: 63 TGIVN-KLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEND 121
GI+ K + + A + G T + L F P D D
Sbjct: 282 EGIMKLKANGGLKTVKKSDAEESREGHELTPEPEELEF-------------YPA-PDGGD 327
Query: 122 SGLEEEAEEVLEELEEESANTTEFVKKTRNK-LYALILAPTRELAIQ 167
S L ++LE E KK NK LYALIL PTRELA+Q
Sbjct: 328 SVL------AAQDLEREK-------KKDLNKPLYALILTPTRELAVQ 361
>gi|332028699|gb|EGI68731.1| ATP-dependent RNA helicase DDX24 [Acromyrmex echinatior]
Length = 743
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 36/164 (21%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P +I+AL + F +PT IQ+ +P+A+L R+DI+GAAETGSGKTLAFGIPI+
Sbjct: 145 WRSMGVPTAVIKALADQNFHSPTMIQTQTLPAAILGRRDILGAAETGSGKTLAFGIPIIK 204
Query: 64 GIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSG 123
GI++ L+N +D+N E TEE ++++
Sbjct: 205 GILD-LKNQN-KDQNS--------------------------------EKDTEESDSENI 230
Query: 124 LEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ E + + + ++ + + LYALIL PTRELA+Q
Sbjct: 231 VLSEFDNCVNIVNDKKLDDCHNI--PTKPLYALILTPTRELAMQ 272
>gi|380015023|ref|XP_003691511.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Apis florea]
Length = 778
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 94/171 (54%), Gaps = 17/171 (9%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W + II+AL + F PT IQ++ +P+A+L +DI+GAAETGSGKTLAFGIPI+
Sbjct: 145 QWQILGVSTPIIKALKDQQFYQPTPIQALTLPAAILGHRDILGAAETGSGKTLAFGIPII 204
Query: 63 TGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDS 122
GI+ +L+N + N + K+ E G + +++N + E + +
Sbjct: 205 NGIL-ELKNKQCDQLNVKSEKEKNKIIENK-------GWICSENKIVEIDNSSSESDYEE 256
Query: 123 GLEEEAE------EVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
++ E V+ ++ NT +++K LYALIL PTRELAIQ
Sbjct: 257 DIDSVNENSIGCVRVINNIKFNETNTENYMEKP---LYALILTPTRELAIQ 304
>gi|189239044|ref|XP_969373.2| PREDICTED: similar to CG9143 CG9143-PA [Tribolium castaneum]
Length = 645
Score = 93.2 bits (230), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 53/64 (82%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P++II+AL +GF PT IQS+ +P+A+L R+DIVGAAETGSGKTLAFG+PI+
Sbjct: 103 WSNFGLPDSIIKALVLQGFNEPTLIQSLSLPAAVLGRRDIVGAAETGSGKTLAFGLPIVA 162
Query: 64 GIVN 67
GI+N
Sbjct: 163 GILN 166
>gi|260829397|ref|XP_002609648.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
gi|229295010|gb|EEN65658.1| hypothetical protein BRAFLDRAFT_123567 [Branchiostoma floridae]
Length = 844
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 88/176 (50%), Gaps = 30/176 (17%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W +P+ ++R L +GF PT IQ+ +P A+ A KD+VGAAETGSGKTLAFGIP
Sbjct: 274 MTSWTPLFVPDVVLRGLADQGFTQPTPIQAQTIPQAIQAHKDVVGAAETGSGKTLAFGIP 333
Query: 61 ILTGIVNKLENPTEEDENDSARKD---------IVGAAETGSGKTLAFGIPILTGIVNKL 111
IL I+ E + +E D K+ E SG G+ G V+
Sbjct: 334 ILHRILEWKERNLQSEEGDLGNKNEEVPEDAADDDDDQEMESG-----GL----GCVHV- 383
Query: 112 ENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
E+D L E LE L+E + +K + L AL+L PTRELA+Q
Sbjct: 384 -------EDDITLPPE----LEALQEAPPLSAPTPQKVVSPLLALVLTPTRELAVQ 428
>gi|322795046|gb|EFZ17894.1| hypothetical protein SINV_04950 [Solenopsis invicta]
Length = 736
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 82/164 (50%), Gaps = 38/164 (23%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P +I+AL + F +PT IQ+ +P+A+L R+DI+GAAETGSGKTLAFGIPI+
Sbjct: 142 WSSMGVPAAVIKALADQNFHSPTMIQAQTLPAAILGRRDILGAAETGSGKTLAFGIPIIK 201
Query: 64 GIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSG 123
GI L+ ++ D + K+I E D +
Sbjct: 202 GI---LDLKSQNDGQNCPVKEI-----------------------------GETDSENED 229
Query: 124 LEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
L + V+ + + NT +K YALIL PTRELA+Q
Sbjct: 230 LSQNCVNVVNNAKLDDHNTP--IK----PFYALILTPTRELAVQ 267
>gi|312381486|gb|EFR27227.1| hypothetical protein AND_06199 [Anopheles darlingi]
Length = 799
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 89/169 (52%), Gaps = 37/169 (21%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W++ + E I++A+ +KGFKTPT+IQ +P+A+ +D++GAAETGSGKTLAFG+P+L
Sbjct: 223 WIELGVSEPIVKAIAEKGFKTPTEIQEKSLPAAIFGHRDLLGAAETGSGKTLAFGLPMLE 282
Query: 64 GI--VNKLENPT---EEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEED 118
GI + +L P EDE+++ D ++L P E+
Sbjct: 283 GIRKLKQLNEPIIYDNEDESETVHSD------------------------HELTPPPEDY 318
Query: 119 ENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
E L E ++V + + K LY LIL PTRELA+Q
Sbjct: 319 E----LSPEDQKVFAMGSSKKKQPMDPTK----PLYGLILTPTRELALQ 359
>gi|328778593|ref|XP_001122313.2| PREDICTED: ATP-dependent RNA helicase DDX24-like [Apis mellifera]
Length = 747
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 86/165 (52%), Gaps = 28/165 (16%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W + II+AL + F PT IQ++ +P A+L +DI+GAAETGSGKTLAFGIPI+
Sbjct: 139 QWQILGVSTPIIKALKDQQFYQPTPIQALTLPPAILGHRDILGAAETGSGKTLAFGIPII 198
Query: 63 TGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDS 122
GI+ +L+N + N + K+ E G + EN T E +N S
Sbjct: 199 NGIL-ELKNKQSDQINIKSEKERNKIIE-NKGWICS-------------ENKTIEIDNSS 243
Query: 123 GLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ E++ + E+ LYALIL PTRELAIQ
Sbjct: 244 SESDYEEDIDKNYMEKP-------------LYALILTPTRELAIQ 275
>gi|224051667|ref|XP_002200206.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Taeniopygia guttata]
Length = 796
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE +++AL GF PT IQ++ +PSA+ D++GAAETGSGKTLAF IP
Sbjct: 193 VSAWKDLFVPEPVLQALSYLGFSAPTPIQALALPSAIRDNMDVLGAAETGSGKTLAFAIP 252
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
++ ++ ++ NDS K+ + + ++ E T +
Sbjct: 253 MIHSVLQWQKSSNSTTRNDSVSKESHQHHDEPRWED-----------EDEAEKLTHQQAE 301
Query: 121 DSGLEEEAE------EVLEELEEESANTTEFVKKTRNK-LYALILAPTRELAIQ 167
DSG E++A +VLE +E + + T + + L L+L PTRELA+Q
Sbjct: 302 DSGDEDDASFTTGCVKVLENVEFDCDDETHTGDSNKKRPLLGLVLTPTRELAVQ 355
>gi|410898437|ref|XP_003962704.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Takifugu
rubripes]
Length = 739
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 21/167 (12%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P +++AL GF +PT IQ++ +PSA+ KDI+GAAETGSGKTLAFGIP
Sbjct: 156 VSAWKDLFVPAPVLKALSSLGFGSPTPIQALTLPSAIRDHKDILGAAETGSGKTLAFGIP 215
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
++ I+ +N E E++ T K+L P + EN + E+E
Sbjct: 216 MIHTILEWKKNSAELVEDN--------IEATIPMKSLYLPEPTAS------ENYSVEEEV 261
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
E E+E++ +E E + + ++ L L+L PTRELA+Q
Sbjct: 262 IKDAETESEDMTKEEENAAGSFSQ-------PLLGLVLTPTRELAVQ 301
>gi|348531313|ref|XP_003453154.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Oreochromis niloticus]
Length = 847
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 84/183 (45%), Gaps = 44/183 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W +P ++RAL GF +PT IQ++ +P A+ R DI+GAAETGSGKTLAFGIP
Sbjct: 241 MSAWKDLFVPPPVLRALSSLGFGSPTPIQALCLPPAIRDRMDILGAAETGSGKTLAFGIP 300
Query: 61 ILTGIV----NKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE 116
I+ I+ N+ EED+ + G+ EN +
Sbjct: 301 IIHTILEWKHNEYTKSAEEDQEE--------------------------GVEASKEN--D 332
Query: 117 EDENDSGLEEEAEEVLEELEEESANTTEFVKKT------------RNKLYALILAPTREL 164
ED D + E+ ++E+E +K L L+L PTREL
Sbjct: 333 EDAEDQNQGDSDEDEHSDVEDEQLGCVRVIKNADFDFDEKPAGAQSRPLLGLVLTPTREL 392
Query: 165 AIQ 167
A+Q
Sbjct: 393 AVQ 395
>gi|196008359|ref|XP_002114045.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
gi|190583064|gb|EDV23135.1| hypothetical protein TRIADDRAFT_58110 [Trichoplax adhaerens]
Length = 685
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 91/173 (52%), Gaps = 31/173 (17%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W +PE +++AL F TPT IQS+ + +A+ RKDI+GAAETGSGKTLA+GIP
Sbjct: 88 MKAWDSLQVPEPVLKALSDMNFLTPTPIQSLSLVAAIRDRKDIIGAAETGSGKTLAYGIP 147
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
I+ I+ + D S+++ + + KT E P+++ ++
Sbjct: 148 IIQRILQ-----LKADGKKSSKR----KWDKANNKTEVIK-----------ETPSKKRKH 187
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNK------LYALILAPTRELAIQ 167
+ G A+ +++S+N T V N +YAL+L PTRELA+Q
Sbjct: 188 EKG----AKPTSSTSDQKSSNKTT-VDNMDNSEVAESPVYALVLTPTRELALQ 235
>gi|353233430|emb|CCD80785.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 722
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W N+P+ I++AL G + PT IQ+ +P AL D++G+A TGSGKTLAFGIP+++
Sbjct: 20 WDSLNLPDYIVKALSDCGLENPTPIQTAAIPPALHGFSDVLGSAPTGSGKTLAFGIPLVS 79
Query: 64 GI--VNKLENPTEEDEN------DSARKDIVGAAE-TGSGKTLAFGIPILTG--IVNKLE 112
+ + L++ T E+E+ D + ++ + G K I +G ++ +L+
Sbjct: 80 KVFSLKTLQSQTCEEESKINSVIDQQKYEVASCVKPCGKKKKRKKETDIYSGLDVIEELD 139
Query: 113 NPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
T E L + E E L RN++Y L+L PTRELAIQ
Sbjct: 140 VNTGEIRAVHSLGDPVTEDSETLPIIEPPVCLKPNLNRNRVYGLVLVPTRELAIQ 194
>gi|256073668|ref|XP_002573151.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 722
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W N+P+ I++AL G + PT IQ+ +P AL D++G+A TGSGKTLAFGIP+++
Sbjct: 20 WDSLNLPDYIVKALSDCGLENPTPIQTAAIPPALHGFSDVLGSAPTGSGKTLAFGIPLVS 79
Query: 64 GI--VNKLENPTEEDEN------DSARKDIVGAAE-TGSGKTLAFGIPILTG--IVNKLE 112
+ + L++ T E+E+ D + ++ + G K I +G ++ +L+
Sbjct: 80 KVFSLKTLQSQTCEEESKINSVIDQQKYEVASCVKPCGKKKKRKKETDIYSGLDVIEELD 139
Query: 113 NPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
T E L + E E L RN++Y L+L PTRELAIQ
Sbjct: 140 VNTGEIRAVHSLGDPVTEDSETLPIIEPPVCLKPNLNRNRVYGLVLVPTRELAIQ 194
>gi|198437354|ref|XP_002125842.1| PREDICTED: similar to CG9143 CG9143-PA [Ciona intestinalis]
Length = 719
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/172 (37%), Positives = 84/172 (48%), Gaps = 51/172 (29%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W +PET+++AL + F P IQ +P A+ ++DI+GAAETGSGKTLAFGIP
Sbjct: 162 MSAWQNLYVPETVLKALAELRFTKPMPIQEQCIPVAIRDKRDILGAAETGSGKTLAFGIP 221
Query: 61 ILTGIV-----NKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPT 115
+L ++ N LEN TE E D
Sbjct: 222 LLHHLMEDRERNLLEN-TENAEID------------------------------------ 244
Query: 116 EEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
E+DE+ S E+AE V +E EE+ T L AL+L PTRELAIQ
Sbjct: 245 EDDEHMSDF-EDAEPVSKEEIEETQPT--------KALPALVLTPTRELAIQ 287
>gi|242022824|ref|XP_002431838.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
gi|212517170|gb|EEB19100.1| ATP-dependent RNA helicase MAK5, putative [Pediculus humanus
corporis]
Length = 543
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 75/167 (44%), Gaps = 64/167 (38%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W F I E I+ ALY K + PTKIQS + G A G
Sbjct: 1 MRSWNSFGIHEKILYALYDKKYFEPTKIQSRCL-----------GPAICG---------- 39
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
+ DI+GAAETGSGKTLAFGIPI+ GI+
Sbjct: 40 ---------------------QMDILGAAETGSGKTLAFGIPIVNGIL------------ 66
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
S +E+E + +E L+ +K +N LYALIL PTRELA+Q
Sbjct: 67 -SIMEKELNQSIESLK---------MKNEKNNLYALILTPTRELAVQ 103
>gi|226483431|emb|CAX74016.1| DEAD-box ATP-dependent RNA helicase 13 [Schistosoma japonicum]
Length = 707
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 63/179 (35%), Positives = 93/179 (51%), Gaps = 15/179 (8%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W +PE I++A+ ++PT IQ +P AL DI+G+A TGSGKTLAFGIP
Sbjct: 1 MTNWESLKLPEYIVKAISDCNLQSPTPIQVKAIPPALHGSFDILGSAPTGSGKTLAFGIP 60
Query: 61 ILTGI--VNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLE---NPT 115
++T I + +LEN T + E+ +++++ + T K+ FG K+ +
Sbjct: 61 LITKIFRIKRLENQTCDGESTTSQREHERSEVTVHTKS--FGKKRKKKDEAKIYLDLDFI 118
Query: 116 EEDENDSGLEEEAEEVLEELEEESANTTEFVK-------KTRNKLYALILAPTRELAIQ 167
EE + D+G E A L + T VK N++Y L+L PTRELAIQ
Sbjct: 119 EELDVDTG-EVRAVHSLGSPVKADNKTLPSVKLPCLARDLNGNRVYGLVLVPTRELAIQ 176
>gi|156404211|ref|XP_001640301.1| predicted protein [Nematostella vectensis]
gi|156227434|gb|EDO48238.1| predicted protein [Nematostella vectensis]
Length = 566
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M EW + I+RAL +GF PT IQS+ +P ALL +DI+GAAETGSGKTLAFGIP
Sbjct: 1 MPEWEGLGVAPDILRALGDQGFSKPTPIQSLSIPPALLYHRDIIGAAETGSGKTLAFGIP 60
Query: 61 ILTGIVNKLENPTEEDEND 79
I+ I + E+ +D
Sbjct: 61 IIQHIEAYKKRKAEQSPSD 79
>gi|363734223|ref|XP_421338.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Gallus gallus]
Length = 809
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 90/174 (51%), Gaps = 18/174 (10%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ +++AL GF PT IQ++ +PSA+ DI+GAAETGSGKTLAF IP
Sbjct: 202 VSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAETGSGKTLAFAIP 261
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
++ ++ ++ + +DS K K + ++ E P +
Sbjct: 262 MIHSVLEWQKSNSSASVSDSVSK-----------KPYQHHDEMRWENDDEAEKPNHQQVE 310
Query: 121 DSGLEEEAE------EVLEELEEESANTTEFVKKTRNK-LYALILAPTRELAIQ 167
DSG E++A +V E E +S+N V + + L L+L PTRELA+Q
Sbjct: 311 DSGDEDDASFATGCVKVQENTEYDSSNKEHTVGLHKKRPLLGLVLTPTRELAVQ 364
>gi|334310507|ref|XP_001370949.2| PREDICTED: ATP-dependent RNA helicase DDX24 [Monodelphis domestica]
Length = 814
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 87/175 (49%), Gaps = 18/175 (10%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE +++AL GF PT IQ++ + A+ DI+GAAETGSGKTLAF IP
Sbjct: 202 VSAWKDLFVPEPVLQALSSMGFSAPTPIQALALAPAIRDNLDILGAAETGSGKTLAFAIP 261
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTG---IVNKL--ENPT 115
++ ++ +DE G + G++L I+N L E
Sbjct: 262 MIHSVLR------WQDEQKETHHGQAG-LHSADGESLGDADDSSDDSNEILNPLPMEREE 314
Query: 116 EEDENDSGL---EEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
E DEN S +EE+ ++ E E E A + N L L+L PTRELA+Q
Sbjct: 315 ERDENPSHSPSDKEESGDIKLEFEYEKAAGH---RNRSNPLLGLVLTPTRELAVQ 366
>gi|147904244|ref|NP_001082400.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Xenopus laevis]
gi|50418383|gb|AAH77543.1| LOC398446 protein [Xenopus laevis]
Length = 706
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W ++P+ +++AL GF PT IQ++ +PSA+ + DI+GAAETGSGKTLAF IP
Sbjct: 108 VSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIP 167
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
++ I+ + + GAAE G K T VN + TE+ E
Sbjct: 168 MIHSIL------------EWQKHQESGAAE-GETKEEP------TSDVNNEIDATEKQEQ 208
Query: 121 DSGLEEEAEEVLEELEEESAN-TTEFVKKTRNK---------LYALILAPTRELAIQ 167
D E+ E+V E+ ++ S N F + +K L L++ PTRELA+Q
Sbjct: 209 DMSENEDVEQV-EDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQ 264
>gi|27882644|gb|AAH43900.1| LOC398446 protein, partial [Xenopus laevis]
Length = 660
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W ++P+ +++AL GF PT IQ++ +PSA+ + DI+GAAETGSGKTLAF IP
Sbjct: 197 VSAWKNLHVPKVVLKALSFLGFTCPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIP 256
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
++ I+ + + GAAE G K T VN + TE+ E
Sbjct: 257 MIHSIL------------EWQKHQESGAAE-GETKEEP------TSDVNNEIDATEKQEQ 297
Query: 121 DSGLEEEAEEVLEELEEESAN-TTEFVKKTRNK---------LYALILAPTRELAIQ 167
D E+ E+V E+ ++ S N F + +K L L++ PTRELA+Q
Sbjct: 298 DMSENEDVEQV-EDNDDVSENFDINFNDMSSSKSGTWGKERPLLGLVVTPTRELAVQ 353
>gi|268564434|ref|XP_002639105.1| Hypothetical protein CBG14924 [Caenorhabditis briggsae]
Length = 357
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
Query: 1 MAEWVKFN-IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
++ W +F +P I+ A+ Q GF PT+IQS V+P A+ R+D++GAAETGSGKTLAFGI
Sbjct: 151 VSAWKQFYFLPNEILEAIEQMGFSQPTEIQSAVLPIAVRDRQDVLGAAETGSGKTLAFGI 210
Query: 60 PILTGIVNKLENPTEEDENDSARKDIVG 87
P+++ ++ L N EE+ R IV
Sbjct: 211 PLVSRLLEALSNKEEEEPPKGPRALIVA 238
>gi|432850192|ref|XP_004066748.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase
DDX24-like [Oryzias latipes]
Length = 820
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 98/189 (51%), Gaps = 36/189 (19%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++++AL GF++PT IQ++ +P A+ D++GAAETGSGKTLAFGIP
Sbjct: 191 VSAWKDLFVPSSVLKALSSLGFESPTPIQALALPPAIRDHMDVLGAAETGSGKTLAFGIP 250
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPIL----------TGIVNK 110
++ I+ + + TE+ +D+ K K ++ +P + T + N+
Sbjct: 251 MIHAIL-EWKRGTEQSLHDNIDK--------TPPKVVSLYLPSVEESAKSEDESTAVGNQ 301
Query: 111 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKT-----------RNK-LYALIL 158
+ DE DS E+ +E+ ++E + VK R++ L ++L
Sbjct: 302 EGSVEASDEEDSSAEDGSED-----QDEKTGSVCTVKNAERCVEEQLAGGRSRPLLGMVL 356
Query: 159 APTRELAIQ 167
PTRELA+Q
Sbjct: 357 TPTRELAVQ 365
>gi|301607357|ref|XP_002933278.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Xenopus
(Silurana) tropicalis]
Length = 817
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 35/184 (19%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ +++AL GF PT IQ++ +PSA+ + DI+GAAETGSGKTLAF IP
Sbjct: 211 VSAWKNLYVPQVVLKALSYLGFACPTPIQALALPSAIRDKMDILGAAETGSGKTLAFAIP 270
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
++ I+ + ++ GAAE + + P + N+++ +E+++
Sbjct: 271 MIHSIL------------EWQKRQEYGAAEGETEEK-----PTTSDGKNEMDVAEKEEQD 313
Query: 121 DSGLEEEAEEVLEELEEESA-----------------NTTEFVKKTRNKLYALILAPTRE 163
S EE+ E+V + +E SA + T K R L L++ PTRE
Sbjct: 314 MSENEEDVEQVDDNVEPLSAACINVENIDINVNAVPSSKTGTWDKER-PLLGLVVTPTRE 372
Query: 164 LAIQ 167
LA+Q
Sbjct: 373 LAVQ 376
>gi|303278168|ref|XP_003058377.1| helicase [Micromonas pusilla CCMP1545]
gi|226459537|gb|EEH56832.1| helicase [Micromonas pusilla CCMP1545]
Length = 1131
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 84/167 (50%), Gaps = 25/167 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W++F++ ++RAL + GF TPT IQS + A+ R D++GAAETGSGKTLAFG+P
Sbjct: 331 VSAWLQFDLHSKLLRALQELGFTTPTPIQSECLNPAVKGRCDVIGAAETGSGKTLAFGLP 390
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
IL ++ + + EE + + V G G N +E+ +
Sbjct: 391 ILHRLLTQRDEEAEEGSDSES----VDGDGDGGGDGDGDDADPDDPFAN-IEDERGRRGS 445
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+G++ + + R L ALI+APTRELA+Q
Sbjct: 446 AAGMK--------------------LDRRRKALRALIVAPTRELAMQ 472
>gi|330797646|ref|XP_003286870.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
gi|325083172|gb|EGC36632.1| hypothetical protein DICPUDRAFT_150880 [Dictyostelium purpureum]
Length = 903
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EW N+ II+ L GF+ PT+IQS V+P A+ DI+GAA+TGSGKTLAFGIP
Sbjct: 247 MSEWTALNLDPLIIKGLRSLGFEKPTEIQSAVLPVAISNGYDIIGAAQTGSGKTLAFGIP 306
Query: 61 ILTGIVNKLENPTEEDENDSARKD 84
++ I+ L + E + +D
Sbjct: 307 MVQRILQHLRKHGQSVEKEGETRD 330
>gi|313238237|emb|CBY13329.1| unnamed protein product [Oikopleura dioica]
Length = 598
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW +FN+ ++RA+ GFK+PT IQ +P L ++K I+GAAETGSGKT+A+G+P
Sbjct: 139 LPEWRRFNLDVALLRAIDSLGFKSPTDIQRQCIPKGLNSKKTILGAAETGSGKTIAYGLP 198
Query: 61 ILTGIVNKLE 70
IL I+ L+
Sbjct: 199 ILQKIIGYLD 208
>gi|66812546|ref|XP_640452.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
gi|74997024|sp|Q54TD7.1|DDX24_DICDI RecName: Full=ATP-dependent RNA helicase ddx24; AltName: Full=DEAD
box protein 24
gi|60468476|gb|EAL66480.1| hypothetical protein DDB_G0281841 [Dictyostelium discoideum AX4]
Length = 940
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EW +N+ I++ L GF PT+IQS V+P A+ + D++GAA+TGSGKTLAFGIP
Sbjct: 293 MSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIP 352
Query: 61 ILTGIVNKLENPTEEDENDSARK 83
++ I+ L + EN + ++
Sbjct: 353 MVQRILQHLRKHGQNVENKANKQ 375
>gi|443706484|gb|ELU02510.1| hypothetical protein CAPTEDRAFT_152919 [Capitella teleta]
Length = 608
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ +PE ++ AL ++ F PT IQ +P+A+ R+DIVGAA TGSGKTLAF IP
Sbjct: 1 MSAWMNLFVPEKVMLALGEQNFVQPTPIQIESLPAAIRDRRDIVGAAHTGSGKTLAFAIP 60
Query: 61 ILTGIVNKLENPTEEDEN 78
IL GI+ KL+ E + N
Sbjct: 61 ILNGIM-KLKEAAENELN 77
>gi|226483433|emb|CAX74017.1| DEAD-box ATP-dependent RNA helicase 13 [Schistosoma japonicum]
Length = 707
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 21/182 (11%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W +PE I++A+ ++PT IQ +P AL DI+G+A TGSGKTLAFGIP
Sbjct: 1 MTSWESLKLPEYIVKAISDCNLQSPTSIQLKAIPPALHDSFDILGSAPTGSGKTLAFGIP 60
Query: 61 ILTGI--VNKLENPTEEDENDSARKD------IVGAAETGSGKTLAFGIPILTGIVNKLE 112
++T I + + EN T E+ +++++ V G + I +G+
Sbjct: 61 LITKILRIKRFENQTCGGESTTSQREHERSEVTVHTKPFGKKRKKKDEAKIYSGL----- 115
Query: 113 NPTEEDENDSGLEEEAEEVLEELEEESANTTEFVK-------KTRNKLYALILAPTRELA 165
+ EE + D+G E A L + VK N++Y L+L PTRELA
Sbjct: 116 DFIEELDVDTG-EVRAVHSLGSPVKADNKILASVKLPCLARNSNGNRVYGLVLVPTRELA 174
Query: 166 IQ 167
IQ
Sbjct: 175 IQ 176
>gi|241253045|ref|XP_002403786.1| RNA helicase, putative [Ixodes scapularis]
gi|215496560|gb|EEC06200.1| RNA helicase, putative [Ixodes scapularis]
Length = 463
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 46/65 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ +PE +++AL + F PT IQ+ +PSA+ D++GAAETGSGKTLAFGIP
Sbjct: 60 MSAWLNCYVPEPVLKALAELNFTQPTPIQAQTLPSAIRDHMDVMGAAETGSGKTLAFGIP 119
Query: 61 ILTGI 65
IL I
Sbjct: 120 ILHHI 124
>gi|393907272|gb|EFO18351.2| hypothetical protein LOAG_10144 [Loa loa]
Length = 698
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ I T+++A+ GF P +IQ +V+PSA+ R DI+GAAETGSGKTLAFG+P
Sbjct: 134 MSGWINLYISNTVLKAIADMGFTEPMEIQRLVIPSAIRDRFDIIGAAETGSGKTLAFGVP 193
Query: 61 IL 62
++
Sbjct: 194 VV 195
>gi|312088074|ref|XP_003145719.1| hypothetical protein LOAG_10144 [Loa loa]
Length = 699
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 46/62 (74%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ I T+++A+ GF P +IQ +V+PSA+ R DI+GAAETGSGKTLAFG+P
Sbjct: 135 MSGWINLYISNTVLKAIADMGFTEPMEIQRLVIPSAIRDRFDIIGAAETGSGKTLAFGVP 194
Query: 61 IL 62
++
Sbjct: 195 VV 196
>gi|326920998|ref|XP_003206751.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Meleagris
gallopavo]
Length = 804
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 26/178 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ +++AL GF PT IQ++ +PSA+ DI+GAAETGSGKTLAF IP
Sbjct: 197 VSAWKDLFVPQPVLKALSSLGFSAPTPIQALTLPSAIRDNMDILGAAETGSGKTLAFAIP 256
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAE----TGSGKTLAFGIPILTGIVNKLENPTE 116
++ ++ ++ + +DS K + G+T E P
Sbjct: 257 MIHCVLEWQKSNSSVSISDSVSKKPYQHPDEMRWESDGET---------------EEPNH 301
Query: 117 EDENDSGLEEEAE------EVLEELEEESANTTEFVKKTRNK-LYALILAPTRELAIQ 167
++ DSG E+ A +V E E +S++ V + + L L+L PTRELA+Q
Sbjct: 302 QEVEDSGDEDVASFATGCVKVQENAEFDSSDKEHTVGLHKKRPLLGLVLTPTRELAVQ 359
>gi|395503712|ref|XP_003756207.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sarcophilus harrisii]
Length = 800
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 24/170 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE ++RAL GF PT IQ++ + A+ DI+GAAETGSGKTLAF IP
Sbjct: 204 VSAWKDLFVPEPVLRALSSLGFSAPTPIQALALAPAIRDNLDILGAAETGSGKTLAFAIP 263
Query: 61 ILTGIVNKLENPTE---EDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEE 117
++ ++ E + E+ + D G+++ G+ + K +P+
Sbjct: 264 MIHSVLRWQEEQEQAGGHSEDGESLGDANGSSDDGNEE--------------KDGDPSHS 309
Query: 118 DENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ E+E+ ++ ELEEE + L L+L PTRELA+Q
Sbjct: 310 PSD----EKESADIELELEEEKPTGHS---NRSSPLLGLVLTPTRELAVQ 352
>gi|324502072|gb|ADY40913.1| ATP-dependent RNA helicase DDX24 [Ascaris suum]
Length = 790
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 51/67 (76%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W+ F +P+ I++AL GF PT+IQ +V+PSA+ + D++GAAETGSGKTLA+ IP
Sbjct: 223 LSAWMPFCLPDEIMKALADLGFTKPTEIQKLVLPSAVRDKLDVLGAAETGSGKTLAYAIP 282
Query: 61 ILTGIVN 67
++ +++
Sbjct: 283 LIVRLLD 289
>gi|402591039|gb|EJW84969.1| DEAD/DEAH box helicase [Wuchereria bancrofti]
Length = 485
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ I + +++A+ GF PT+IQ +V+PSA+ R DI+GAAETGSGKTLAFG+P
Sbjct: 1 MSGWINLYISDAVLKAVADMGFTEPTEIQKLVIPSAVRDRFDIIGAAETGSGKTLAFGVP 60
Query: 61 ILTGIV 66
++ ++
Sbjct: 61 VVEHLL 66
>gi|402877046|ref|XP_003902254.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Papio anubis]
Length = 856
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIV-----NKLENPTEED---------------------------------ENDSAR 82
++ ++ N P+ D E+++
Sbjct: 249 VIHAVLQWQKRNAAPPPSNTDASPRETRTEAGAETGSPGKAEAESGALPDDTIIESEALP 308
Query: 83 KDIVGAAE-----TGSGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
D A TGS + L FG + ++ + P + + + L++E L
Sbjct: 309 SDTAAEARAKTGGTGSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 368
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 369 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 400
>gi|170595141|ref|XP_001902262.1| DEAD/DEAH box helicase family protein [Brugia malayi]
gi|158590158|gb|EDP28893.1| DEAD/DEAH box helicase family protein [Brugia malayi]
Length = 668
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 48/66 (72%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ I +++A+ GF PT+IQ +V+PSA+ R DI+GAAETGSGKTLAFG+P
Sbjct: 150 MSGWINLYISNAVLKAIADMGFTEPTEIQKLVIPSAVRDRFDIIGAAETGSGKTLAFGVP 209
Query: 61 ILTGIV 66
++ ++
Sbjct: 210 VVEHLL 215
>gi|327259240|ref|XP_003214446.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Anolis
carolinensis]
Length = 799
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 88/183 (48%), Gaps = 39/183 (21%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ +++AL + GF PT IQ++ +PSA+ D++GAAETGSGKTLAF IP
Sbjct: 189 ISAWKGLFVPKPVLQALSELGFSAPTPIQALALPSAIRDSMDVLGAAETGSGKTLAFAIP 248
Query: 61 ILTGIVN-------------KLE---NPTEEDENDSARKDIVGAAETGSGKTLAFGIPIL 104
++ I+ +LE + EE + A +DI G + S + I +
Sbjct: 249 MIHSILQWYKSRGLPKGSKIQLEDGGDSEEELSKEEASEDIGGLS---SAEANCAAISSV 305
Query: 105 TGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTREL 164
+V E +E+ ++ + V + N L L+L PTREL
Sbjct: 306 ESLVTLCEKASEDGDHPKH--------------------DTVGERSNPLLGLVLTPTREL 345
Query: 165 AIQ 167
A+Q
Sbjct: 346 AVQ 348
>gi|255079576|ref|XP_002503368.1| helicase [Micromonas sp. RCC299]
gi|226518634|gb|ACO64626.1| helicase [Micromonas sp. RCC299]
Length = 1160
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 54/80 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W++F++ ++RAL GF PT IQ+ + A+ R D++GAAETGSGKTLAFG+P
Sbjct: 349 VSNWLQFDLHPKLLRALQDLGFSDPTPIQTECLNPAIKGRCDVIGAAETGSGKTLAFGLP 408
Query: 61 ILTGIVNKLENPTEEDENDS 80
IL I+ + + +E ++S
Sbjct: 409 ILHRILTQRDEEADESASES 428
>gi|405950996|gb|EKC18946.1| ATP-dependent RNA helicase DDX24 [Crassostrea gigas]
Length = 1159
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA W +P+ +++AL + F PT IQ+M +PSA+ RKD+VGAAETGSGKTLAFGIP
Sbjct: 222 MAAWKDLFVPKEVLQALCKSKFFAPTPIQAMALPSAIRDRKDVVGAAETGSGKTLAFGIP 281
Query: 61 I 61
+
Sbjct: 282 V 282
>gi|109084685|ref|XP_001097132.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 5 [Macaca
mulatta]
Length = 856
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIV-----NKLENPTEED---------------------------------ENDSAR 82
++ ++ N P+ D E+++
Sbjct: 249 VIHAVLQWQKRNAAPPPSNTDASPGETRTEAGAETGSPGKAEAESGALPDDTIIESEALP 308
Query: 83 KDIVGAAE-----TGSGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLE-EEAEEVL 132
D A TGS + L FG + ++ + P + + + L+ E+ +
Sbjct: 309 SDTAAEARAKTGGTGSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQIGNLK 368
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 369 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 400
>gi|84578997|dbj|BAE72932.1| hypothetical protein [Macaca fascicularis]
Length = 819
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 152 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAIP 211
Query: 61 ILTGIV-----NKLENPTEED---------------------------------ENDSAR 82
++ ++ N P+ D E+++
Sbjct: 212 VIHAVLQWQKRNAAPPPSNTDASPGETRAEAGAETGSPGKAEAESGALPDDTIIESEALP 271
Query: 83 KDIVGAAE-----TGSGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLE-EEAEEVL 132
D A TGS + L FG + ++ + P + + + L+ E+ +
Sbjct: 272 SDTAAEARAKTGGTGSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQIGNLK 331
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 332 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 363
>gi|355693530|gb|EHH28133.1| hypothetical protein EGK_18492 [Macaca mulatta]
gi|387541990|gb|AFJ71622.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIV-----NKLENPTEED---------------------------------ENDSAR 82
++ ++ N P+ D E+++
Sbjct: 249 VIHAVLQWQKRNAAPPPSNTDASPGETRTEAGAETGSPGKAEAESGALPDDTIIESEALP 308
Query: 83 KDIVGAAE-----TGSGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLE-EEAEEVL 132
D A TGS + L FG + ++ + P + + + L+ E+ +
Sbjct: 309 SDTAAEARAKTGGTGSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQIGNLK 368
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 369 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 400
>gi|380814882|gb|AFE79315.1| ATP-dependent RNA helicase DDX24 [Macaca mulatta]
Length = 856
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIV-----NKLENPTEED---------------------------------ENDSAR 82
++ ++ N P+ D E+++
Sbjct: 249 VIHAVLQWQKRNAAPPPSNTDASPGETRTEAGAETGSPGKAEAESGALPDDTIIESEALP 308
Query: 83 KDIVGAAE-----TGSGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLE-EEAEEVL 132
D A TGS + L FG + ++ + P + + + L+ E+ +
Sbjct: 309 SDTAAEARAKTGGTGSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQIGNLK 368
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 369 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 400
>gi|355778814|gb|EHH63850.1| hypothetical protein EGM_16904 [Macaca fascicularis]
Length = 856
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDRLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIV-----NKLENPTEED---------------------------------ENDSAR 82
++ ++ N P+ D E+++
Sbjct: 249 VIHAVLQWQKRNAAPPPSNTDASPGETRTEAGAETGSPGKAEAESGALPDDTIIESEALP 308
Query: 83 KDIVGAAE-----TGSGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLE-EEAEEVL 132
D A TGS + L FG + ++ + P + + + L+ E+ +
Sbjct: 309 SDTAAEARAKTGGTGSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQIGNLK 368
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 369 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 400
>gi|66356610|ref|XP_625483.1| Mak5 pre-mRNA splicing RNA SFII helicase [Cryptosporidium parvum
Iowa II]
gi|46226478|gb|EAK87472.1| Mak5 pre-mRNA splicing RNA SFII helicase [Cryptosporidium parvum
Iowa II]
Length = 837
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 22/161 (13%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I +I++ L + GF PT IQ+ + A+ RKDIVGAAETGSGKTLA+GIPI+ I+
Sbjct: 181 IHPSILKGLSELGFLNPTPIQAACLVPAIRDRKDIVGAAETGSGKTLAYGIPIIANIMFS 240
Query: 69 LENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEA 128
+ E+ E S ++ G E + GI EEDE LE
Sbjct: 241 AQRRREKLEQKSLKEYDDGFEEP----DIQLGI--------------EEDEGFKELERMG 282
Query: 129 EEV--LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
++ + ++ + + F K+ L ALI+ P+RELAIQ
Sbjct: 283 FKMTSVSNIDSKVSKNNSF--KSDQALQALIVLPSRELAIQ 321
>gi|17507641|ref|NP_491652.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
gi|351063669|emb|CCD71883.1| Protein F55F8.2, isoform a [Caenorhabditis elegans]
Length = 746
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 57/81 (70%), Gaps = 4/81 (4%)
Query: 1 MAEWVKFN-IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
++ W +F +P ++ A+ Q GF PT+IQS V+P+A+ R+D++GAAETGSGKTLAFGI
Sbjct: 153 ISAWKQFYFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGI 212
Query: 60 PILTGIVNKLENPTEEDENDS 80
P++ + LE+ + E +S
Sbjct: 213 PLVARL---LESSDDSQETES 230
>gi|323509857|dbj|BAJ77821.1| cgd8_190 [Cryptosporidium parvum]
Length = 781
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 22/161 (13%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I +I++ L + GF PT IQ+ + A+ RKDIVGAAETGSGKTLA+GIPI+ I+
Sbjct: 181 IHPSILKGLSELGFLNPTPIQAACLVPAIRDRKDIVGAAETGSGKTLAYGIPIIANIMFS 240
Query: 69 LENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEA 128
+ E+ E S ++ G E + GI EEDE LE
Sbjct: 241 AQRRREKLEQKSLKEYDDGFEEP----DIQLGI--------------EEDEGFKELERMG 282
Query: 129 EEV--LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
++ + ++ + + F K+ L ALI+ P+RELAIQ
Sbjct: 283 FKMTSVSNIDSKVSKNNSF--KSDQALQALIVLPSRELAIQ 321
>gi|426195290|gb|EKV45220.1| hypothetical protein AGABI2DRAFT_120189 [Agaricus bisporus var.
bisporus H97]
Length = 761
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW +++ ++ ALY+KGF++PT IQ+ +P A+ KD+VG A+TGSGKTLA+GIP
Sbjct: 114 LPEWASYSLHPQLLHALYRKGFESPTSIQAAAIPVAVKG-KDVVGVAQTGSGKTLAYGIP 172
Query: 61 ILTGIVNK 68
IL ++++
Sbjct: 173 ILHYLLSQ 180
>gi|63100911|gb|AAH95704.1| LOC553462 protein, partial [Danio rerio]
Length = 310
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE ++RAL GF PT IQ++V+P A+ R DI+GAAETGSGKTL GIP
Sbjct: 216 VSSWRDLLVPEPVLRALAVLGFSAPTAIQALVLPPAIRDRLDILGAAETGSGKTLCLGIP 275
Query: 61 ILTGIVNKLENPTEE 75
++ I+ E TEE
Sbjct: 276 MIHMILQWREQ-TEE 289
>gi|67617125|ref|XP_667529.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 24 [Cryptosporidium
hominis TU502]
gi|54658672|gb|EAL37298.1| DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 24 [Cryptosporidium
hominis]
Length = 837
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 22/161 (13%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I +I++ L + GF PT IQ+ + A+ RKDIVGAAETGSGKTLA+GIPI+ I+
Sbjct: 181 IHPSILKGLSELGFLNPTPIQAACLVPAIRDRKDIVGAAETGSGKTLAYGIPIIANIMFS 240
Query: 69 LENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEA 128
+ E+ E S ++ G E + GI EEDE LE
Sbjct: 241 AQRRREKLEQKSLKEYDDGFEEPD----IQLGI--------------EEDEGFKELERMG 282
Query: 129 EEV--LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
++ + ++ + + F K+ L ALI+ P+RELAIQ
Sbjct: 283 FKMTSVSNIDSKVSKNNSF--KSDEALQALIVLPSRELAIQ 321
>gi|328872649|gb|EGG21016.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 909
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W +N+ II+ L G++ PT+IQS V+P+++ + DI+GAAETGSGKTLAFGIP
Sbjct: 249 MTVWESYNLDPLIIKGLRALGYERPTEIQSQVIPASIQSGNDIIGAAETGSGKTLAFGIP 308
Query: 61 ILTGIVNKLENPTEE 75
++ I+ L E+
Sbjct: 309 MVNTILKYLRAQGED 323
>gi|336388501|gb|EGO29645.1| ATP-dependent RNA helicase [Serpula lacrymans var. lacrymans S7.9]
Length = 754
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W +++ +++ L+ +GF TPT IQS +P A+ R DIVG AETGSGKTLA+G+P
Sbjct: 128 LPNWHSYSLHPHLLQILHHQGFTTPTPIQSKSLPKAMEGR-DIVGVAETGSGKTLAYGLP 186
Query: 61 ILTGIVNKLENPTEE 75
IL ++++ +P+ +
Sbjct: 187 ILHHLLSRSRHPSSK 201
>gi|346471193|gb|AEO35441.1| hypothetical protein [Amblyomma maculatum]
Length = 684
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ +PE ++RAL + F PT+IQ+ +P+A+ DI+GAAETGSGKTLAFGIP
Sbjct: 115 MSAWLNCYVPEQVLRALAELKFTEPTEIQAQTLPAAIRDHMDIMGAAETGSGKTLAFGIP 174
Query: 61 ILTGIVN-KLENPTE 74
+L I+ KL P E
Sbjct: 175 LLHHIMERKLRQPEE 189
>gi|428175672|gb|EKX44561.1| hypothetical protein GUITHDRAFT_109675 [Guillardia theta CCMP2712]
Length = 748
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
EW + + +++AL ++GF+ PT IQ +V+P+A+ R+DI GAAETGSGKTLAF +P+L
Sbjct: 189 EWNCVMLRKCLVKALKEQGFEQPTAIQELVIPAAMAKRQDIFGAAETGSGKTLAFALPML 248
Query: 63 TGIVN 67
I++
Sbjct: 249 QRILD 253
>gi|209876618|ref|XP_002139751.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
gi|209555357|gb|EEA05402.1| DEAD/DEAH box helicase family protein [Cryptosporidium muris RN66]
Length = 817
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 58/173 (33%), Positives = 87/173 (50%), Gaps = 30/173 (17%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I +I++ + + GF +PTK+Q M + A+ RKDI+ AETGSGKTLA+GIPIL I+
Sbjct: 151 IHPSILKGIEKLGFFSPTKVQEMCLIPAIRDRKDIIATAETGSGKTLAYGIPILVNIMFT 210
Query: 69 LENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE----EDENDSGL 124
+ E+ E K+L F I N +++ D ND+
Sbjct: 211 EQRRREKLET----------------KSLKFNSLEDKYINNSIDDTDYFEKILDSNDNEN 254
Query: 125 EEEAEEVLEELEEESANTTEF---VKKTRNKLY-------ALILAPTRELAIQ 167
EE ++ L L+E TE ++ +N+ Y ALI+ P+RELA+Q
Sbjct: 255 NEEVDDTLVTLKELGFKITEISGDIELDKNEFYEIDKPLQALIILPSRELALQ 307
>gi|114654532|ref|XP_001151974.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 6 [Pan
troglodytes]
gi|410227214|gb|JAA10826.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410252476|gb|JAA14205.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410299418|gb|JAA28309.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
gi|410331293|gb|JAA34593.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Pan troglodytes]
Length = 859
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 53/216 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPT-------------------------EED--------ENDSAR 82
++ ++ N P+ E D E+++
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEARAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEV 131
DI A +G T++ +L G + E P+ E+E ++ ++E+ +
Sbjct: 311 SDIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLVKEQTGNL 369
Query: 132 LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 370 KQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|343962287|dbj|BAK62731.1| ATP-dependent RNA helicase DDX24 [Pan troglodytes]
Length = 859
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 53/216 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPT-------------------------EED--------ENDSAR 82
++ ++ N P+ E D E+++
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEARAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEV 131
DI A +G T++ +L G + E P+ E+E ++ ++E+ +
Sbjct: 311 SDIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLVKEQTGNL 369
Query: 132 LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 370 KQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|432096748|gb|ELK27327.1| ATP-dependent RNA helicase DDX24 [Myotis davidii]
Length = 790
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 96/202 (47%), Gaps = 38/202 (18%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPRPVLRALSALGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 ILTGIVN-KLENPTEEDENDSARKDIVGA-------AETGSGKTL-AFGI-----PILTG 106
++ ++ +++ PT N +A GA A T SG GI P TG
Sbjct: 250 MIHSVLQWQVKKPTPALSNTAAPPGETGAEAGSPSKAGTESGSMCDEMGIEGEAQPSETG 309
Query: 107 ---------------------IVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEF 145
++ + P ++++ + L+E+ + +E + +S
Sbjct: 310 AAISDQVLPFWDDDAGEGPSSLIREKSIPKQDEDKEEKLDEQTGTLQQEFDVKSVTCKSH 369
Query: 146 VKKTRNKLYALILAPTRELAIQ 167
K+ L L+L PTRELA+Q
Sbjct: 370 PKR---PLLGLVLTPTRELAVQ 388
>gi|341883047|gb|EGT38982.1| hypothetical protein CAEBREN_08481 [Caenorhabditis brenneri]
Length = 736
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
++ W K F +P I++A+ + GF PT+IQS V+P A+ R D++GAAETGSGKTLAFGI
Sbjct: 150 ISAWEKLFFLPTEILQAVERMGFSQPTEIQSAVLPIAVRDRMDVLGAAETGSGKTLAFGI 209
Query: 60 PILTGIVNKL 69
P+++ +++ +
Sbjct: 210 PLVSRLLDDI 219
>gi|395323772|gb|EJF56229.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW F + + RALY K F TPT IQ+ +P AL KD+VG AETGSGKTLA+G+P
Sbjct: 129 LPEWHSFKLHPQLARALYAKKFTTPTPIQAQTLPLAL-KNKDVVGVAETGSGKTLAYGLP 187
Query: 61 IL 62
IL
Sbjct: 188 IL 189
>gi|440296216|gb|ELP89056.1| ATP-dependent RNA helicase mak5, putative [Entamoeba invadens IP1]
Length = 606
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
M EW K + I TI+RALY GF PT+IQ +P AL ++KD++G+A TGSGKTL+F I
Sbjct: 61 MKEWRKLYKIDITILRALYDLGFIYPTEIQKFAIPKALTSQKDLIGSAPTGSGKTLSFLI 120
Query: 60 PILTGIVNK 68
P++ + K
Sbjct: 121 PLVQRFIEK 129
>gi|449458872|ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
sativus]
Length = 848
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++++Y+ GFK PT IQ +P+A KD+VGAAETGSGKTLAFG+PIL
Sbjct: 218 WNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQ 277
Query: 64 GIVNKLE 70
+++ E
Sbjct: 278 RFLDERE 284
>gi|426377845|ref|XP_004055664.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Gorilla gorilla
gorilla]
Length = 859
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPTE----------------------EDENDSARKDIV------- 86
++ ++ N P+ E E+D+ D V
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 87 ------GAAETG---SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
A+TG S + L FG + ++ + P + + + L++E L
Sbjct: 311 SDIAAEATAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 370
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 371 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|62088344|dbj|BAD92619.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 variant [Homo sapiens]
Length = 676
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 53/216 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 197 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 256
Query: 61 ILTGIV-----NKLENPT-------------------------EED--------ENDSAR 82
++ ++ N P+ E D E+++
Sbjct: 257 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 316
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEV 131
DI A +G T++ +L G + E P+ E+E ++ +E+ +
Sbjct: 317 SDIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNL 375
Query: 132 LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 376 KQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 408
>gi|119601956|gb|EAW81550.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Homo
sapiens]
Length = 670
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 53/216 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPT-------------------------EED--------ENDSAR 82
++ ++ N P+ E D E+++
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEV 131
DI A +G T++ +L G + E P+ E+E ++ +E+ +
Sbjct: 311 SDIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNL 369
Query: 132 LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 370 KQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|449509127|ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
[Cucumis sativus]
Length = 784
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++++Y+ GFK PT IQ +P+A KD+VGAAETGSGKTLAFG+PIL
Sbjct: 198 WNELRLHPLLMKSIYKLGFKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQ 257
Query: 64 GIVNKLE 70
+++ E
Sbjct: 258 RFLDERE 264
>gi|9966805|ref|NP_065147.1| ATP-dependent RNA helicase DDX24 [Homo sapiens]
gi|18202929|sp|Q9GZR7.1|DDX24_HUMAN RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|9931361|gb|AAG02169.1|AF214731_1 ATP-dependent RNA helicase [Homo sapiens]
gi|10437623|dbj|BAB15079.1| unnamed protein product [Homo sapiens]
gi|12053271|emb|CAB66820.1| hypothetical protein [Homo sapiens]
gi|14250756|gb|AAH08847.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|14424802|gb|AAH09406.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Homo sapiens]
gi|117645896|emb|CAL38415.1| hypothetical protein [synthetic construct]
gi|119601957|gb|EAW81551.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Homo
sapiens]
gi|123993695|gb|ABM84449.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|124000001|gb|ABM87509.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
gi|208967745|dbj|BAG72518.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [synthetic construct]
Length = 859
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPTE----------------------EDENDSARKDIV------- 86
++ ++ N P+ E E+D+ D V
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 87 ------GAAETG---SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
A+TG S + L FG + ++ + P + + + L++E L
Sbjct: 311 SDIAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 370
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 371 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|119601958|gb|EAW81552.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_c [Homo
sapiens]
Length = 840
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 53/216 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPT-------------------------EED--------ENDSAR 82
++ ++ N P+ E D E+++
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEV 131
DI A +G T++ +L G + E P+ E+E ++ +E+ +
Sbjct: 311 SDIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNL 369
Query: 132 LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 370 KQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|194386302|dbj|BAG59715.1| unnamed protein product [Homo sapiens]
Length = 763
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 148 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 207
Query: 61 ILTGIV-----NKLENPTE----------------------EDENDSARKDIV------- 86
++ ++ N P+ E E+D+ D V
Sbjct: 208 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 267
Query: 87 ------GAAETG---SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
A+TG S + L FG + ++ + P + + + L++E L
Sbjct: 268 SDIAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 327
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 328 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 359
>gi|326675871|ref|XP_003200454.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Danio rerio]
Length = 881
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/74 (48%), Positives = 49/74 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE ++RAL GF PT IQ++V+P A+ R DI+GAAETGSGKTL FGIP
Sbjct: 282 VSSWRDLLVPEPVLRALAVLGFSAPTAIQALVLPPAIRDRLDILGAAETGSGKTLCFGIP 341
Query: 61 ILTGIVNKLENPTE 74
++ I+ E E
Sbjct: 342 MIHMILQWREQTEE 355
>gi|339238663|ref|XP_003380886.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
gi|316976157|gb|EFV59493.1| ATP-dependent RNA helicase DDX24 [Trichinella spiralis]
Length = 654
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + +PE I+ AL + PT IQ++ +P A+ R DI+GAAETGSGKTLAFGIP
Sbjct: 93 LKKWQELFVPEEILHALDDLEYFEPTPIQALCLPPAIRDRLDILGAAETGSGKTLAFGIP 152
Query: 61 ILTGIVN 67
++ G+++
Sbjct: 153 VIAGLLS 159
>gi|427788943|gb|JAA59923.1| Putative gamete proteinration [Rhipicephalus pulchellus]
Length = 691
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 54/80 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ ++PE ++RAL + F PT+IQ+ +P+A+ DI+GAAETGSGKTLAFGIP
Sbjct: 119 MSAWLNCHVPEPVLRALAELNFTEPTEIQAQTLPAAIRDHLDIMGAAETGSGKTLAFGIP 178
Query: 61 ILTGIVNKLENPTEEDENDS 80
+L I+ + + E + +
Sbjct: 179 LLHHIMERKSRLSAEGDTKA 198
>gi|149642575|ref|NP_001092515.1| ATP-dependent RNA helicase DDX24 [Bos taurus]
gi|148878167|gb|AAI46185.1| DDX24 protein [Bos taurus]
gi|296475209|tpg|DAA17324.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Bos taurus]
Length = 852
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 47/211 (22%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 ILTGI------------VNKLENPTEEDENDS-----ARKDIVG----------AAETGS 93
++ + ++ P E N++ A D +G A+TG+
Sbjct: 250 MIDAVLRWQVKKKPTPAISNTGAPPGETGNEAGAAPGALPDEIGIEGEAPPSEVGAKTGT 309
Query: 94 GKTLAF----------GIPILTGIVNKLENPTE-------EDENDSGLEEEAEEVLEELE 136
+ A G+P G + E P+ ++ D+ +E+ EE +L+
Sbjct: 310 PPSQAGTSIGAAASDPGLPSRDGDGDAGEGPSSLIREKPTPEQEDNQVEKHDEEQAGKLK 369
Query: 137 EESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+E +T K+ L L+L PTRELA+Q
Sbjct: 370 QELGGSTVPPKRP---LLGLVLTPTRELAVQ 397
>gi|242076434|ref|XP_002448153.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
gi|241939336|gb|EES12481.1| hypothetical protein SORBIDRAFT_06g022240 [Sorghum bicolor]
Length = 807
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++EW + + +++A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+P
Sbjct: 212 VSEWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHQGKDVIGAAETGSGKTLAFGLP 271
Query: 61 ILTGIVNKLE 70
IL ++ + E
Sbjct: 272 ILQRLLEERE 281
>gi|440796416|gb|ELR17525.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 926
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W FN+ T++ A+ + F +PT IQ + +AL KD+VG AETGSGKTLA+G+P
Sbjct: 254 LKSWQHFNLHPTLMEAIKEYKFFSPTPIQEKALTAALREDKDVVGVAETGSGKTLAYGLP 313
Query: 61 ILTGIVNKLENPTEEDENDSARKD 84
IL +KL E++E D KD
Sbjct: 314 IL----HKLTKKREQEERDGVEKD 333
>gi|390352859|ref|XP_784112.3| PREDICTED: ATP-dependent RNA helicase DDX24-like
[Strongylocentrotus purpuratus]
Length = 934
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W +IP + +L GF +PT IQ+ +P+A+ KDIVGAAETGSGKTLAFGIP
Sbjct: 247 MSTWDTLSIPTVVHESLQTMGFASPTPIQAGCIPAAINEGKDIVGAAETGSGKTLAFGIP 306
Query: 61 ILTGIVN 67
++ I+
Sbjct: 307 LIYRILQ 313
>gi|397525830|ref|XP_003832856.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Pan paniscus]
Length = 859
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 53/216 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLVPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPT-------------------------EED--------ENDSAR 82
++ ++ N P+ E D E+++
Sbjct: 251 MIHVVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEV 131
DI A +G T++ +L G + E P+ E E ++ ++E+ +
Sbjct: 311 SDIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQNESEEENLVKEQTGNL 369
Query: 132 LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 370 KQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>gi|326526415|dbj|BAJ97224.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 872
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W++ + +I+A+++ GF PT IQ +P+ KD++GAAETGSGKTLAFG+PIL
Sbjct: 240 WLELRLHPLLIKAMHRLGFNEPTPIQKACIPAGAHQGKDVIGAAETGSGKTLAFGLPILQ 299
Query: 64 GIVNKLENPTE---EDENDS 80
++ + E T EDE ++
Sbjct: 300 RLLEEREKTTRLHVEDEKEA 319
>gi|74178110|dbj|BAE29843.1| unnamed protein product [Mus musculus]
gi|74220253|dbj|BAE31305.1| unnamed protein product [Mus musculus]
gi|74225346|dbj|BAE31603.1| unnamed protein product [Mus musculus]
Length = 857
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 192 VSAWRDLFVPEAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 252 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 311
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 312 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 371
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 372 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 402
>gi|197101980|ref|NP_001125038.1| ATP-dependent RNA helicase DDX24 [Pongo abelii]
gi|75061972|sp|Q5RDL2.1|DDX24_PONAB RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|55726767|emb|CAH90145.1| hypothetical protein [Pongo abelii]
Length = 859
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ + + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPTE----------------------EDENDSARKDIV------- 86
++ ++ N P+ E E+D+ D V
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRPEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 87 ------GAAETG---SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
A+TG S + L FG + ++ + P + + + L++E L
Sbjct: 311 SDTAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 370
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 371 QELDDKSATCKTYPKRP---LLGLVLTPTRELAVQ 402
>gi|148686887|gb|EDL18834.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_a [Mus
musculus]
Length = 943
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 278 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 337
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 338 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 397
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 398 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 457
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 458 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 488
>gi|281207739|gb|EFA81919.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 932
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W ++++ +++ L G+ PT+IQS V+P+AL DI+GAAETGSGKTLAFGIP
Sbjct: 311 ISAWNQYDLDPLLVKGLKALGYGEPTEIQSQVIPAALKNGLDIIGAAETGSGKTLAFGIP 370
Query: 61 ILTGIVNKLEN 71
+L I+ L +
Sbjct: 371 MLHNILTYLRS 381
>gi|149641853|ref|XP_001511203.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ornithorhynchus
anatinus]
Length = 812
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 83/177 (46%), Gaps = 17/177 (9%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W +P+ ++RAL GF+ PT IQ++ + A+ DI+GAAETGSGKTLAF IP
Sbjct: 200 MSAWKDLFVPKPVLRALSSLGFEAPTPIQALTLTPAIRDNLDILGAAETGSGKTLAFAIP 259
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGK----TLAFGIPILTGIVNKLENPTE 116
++ ++ END+ + D GA G T + G N
Sbjct: 260 MIHSVLR------WRKENDT-KGDKAGAPRVPEGSLDEATASDGNRSSCRDANWDPALDS 312
Query: 117 EDENDSGLEEEAEEV------LEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ E D +E+ V L+ E + K + L L+L PTRELA+Q
Sbjct: 313 DTEGDGSNGDESRPVGGRTEPLDPKSELGSAGAAPGAKKASCLLGLVLTPTRELAVQ 369
>gi|293332967|ref|NP_001169277.1| uncharacterized protein LOC100383140 [Zea mays]
gi|224028341|gb|ACN33246.1| unknown [Zea mays]
Length = 842
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + + +++A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+P
Sbjct: 208 VSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTLAFGLP 267
Query: 61 ILTGIVNKLENPT---EEDE 77
+L ++ + E T +EDE
Sbjct: 268 VLQRLLEEREKATRLQQEDE 287
>gi|414586362|tpg|DAA36933.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 842
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + + +++A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+P
Sbjct: 208 VSAWRELRLHPLLLKAMRRLGFKEPTPIQKSCFPAAAHRGKDVIGAAETGSGKTLAFGLP 267
Query: 61 ILTGIVNKLENPT---EEDE 77
+L ++ + E T +EDE
Sbjct: 268 VLQRLLEEREKATRLQQEDE 287
>gi|195585051|ref|XP_002082308.1| GD25288 [Drosophila simulans]
gi|194194317|gb|EDX07893.1| GD25288 [Drosophila simulans]
Length = 306
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P +I+RAL ++GFKTPT+IQ++ +P+A+ +KDI+GAAETGSGK P
Sbjct: 215 VSAWNGLGVPASILRALGEQGFKTPTQIQALTLPAAIHGKKDILGAAETGSGKLWPLAYP 274
Query: 61 I 61
Sbjct: 275 C 275
>gi|340374409|ref|XP_003385730.1| PREDICTED: hypothetical protein LOC100639442 [Amphimedon
queenslandica]
Length = 1012
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 4 WVKFNIPETIIRALYQK-GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
W + +TI+R+L + GF TPT+IQ +P A+ + DI+GAAETGSGKTLAFG+P+L
Sbjct: 565 WSSLGLHDTIVRSLVDRLGFSTPTEIQQKAIPPAINGKHDIIGAAETGSGKTLAFGLPVL 624
Query: 63 TGIV 66
I+
Sbjct: 625 NYIL 628
>gi|357505253|ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 798
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++A+++ GFK PT IQ +P+A KD++GAAETGSGKTLAFG+PIL
Sbjct: 164 WNELRLHPRLMKAIHKLGFKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 223
Query: 64 GIVNKLE 70
++ + E
Sbjct: 224 RLLEERE 230
>gi|441666446|ref|XP_004093167.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX24
[Nomascus leucogenys]
Length = 857
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIV-----------NKLENPTEEDENDSA---RKDIVGAAETG-------------- 92
++ ++ + E P E ++ R + AE+G
Sbjct: 249 VIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPVKAEAESGALPDDTVIESEALP 308
Query: 93 ---------------SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
S + L FG + ++ + P + + + L++E L
Sbjct: 309 SDTAAEARAKTGGTISDQALLFGDDDAGEGPSSLIREKPVPKQNENEEKNLDKEQTGNLK 368
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++S + K+ L L+L PTRELA+Q
Sbjct: 369 QELDDKSTTCKAYPKRP---LLGLVLTPTRELAVQ 400
>gi|325185978|emb|CCA20482.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 743
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/65 (53%), Positives = 44/65 (67%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ TI+ AL+ F PT IQ + +AL+ R+D+VG A TGSGKTLAFGIPIL
Sbjct: 152 WEAFNLHHTILEALHDNKFLAPTVIQRKAIAAALIQREDVVGIASTGSGKTLAFGIPILQ 211
Query: 64 GIVNK 68
+NK
Sbjct: 212 HFLNK 216
>gi|226958385|ref|NP_001152974.1| ATP-dependent RNA helicase DDX24 isoform 1 [Mus musculus]
Length = 903
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 238 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 297
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 298 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 357
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 358 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 417
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 418 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 448
>gi|403298098|ref|XP_003939872.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Saimiri boliviensis
boliviensis]
Length = 860
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 97/215 (45%), Gaps = 52/215 (24%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 193 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 252
Query: 61 ILTGIVN--------------------------------KLEN-----PTEEDENDSARK 83
++ ++ K E P E+++
Sbjct: 253 MIHAVLQWHKRKAAPAPRNTEAPPGETSTEAEAETRSPVKAETESGVLPDNVTESEALSS 312
Query: 84 DIVGAAETGSGKTLAFGIPILTGIVNKLENPTE-----------EDENDSGLEEEAEEVL 132
D A +G T++ + +L G + E P+ E+E + +E+ +
Sbjct: 313 DTAAEARAKTGGTVSDQV-LLFGDDDAGEGPSSLIREKPVPKQNENEEEKLDKEQTGNLK 371
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + ++ L L+L PTRELA+Q
Sbjct: 372 QELDDKSATCKAYPERP---LLGLVLTPTRELALQ 403
>gi|9931363|gb|AAG02170.1|AF214732_1 ATP-dependent RNA helicase [Mus musculus]
Length = 857
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 252 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 311
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 312 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 371
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 372 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 402
>gi|34328253|ref|NP_065240.2| ATP-dependent RNA helicase DDX24 isoform 2 [Mus musculus]
gi|341940454|sp|Q9ESV0.2|DDX24_MOUSE RecName: Full=ATP-dependent RNA helicase DDX24; AltName: Full=DEAD
box protein 24
gi|32967660|gb|AAH55048.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|33244019|gb|AAH55317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Mus musculus]
gi|148686888|gb|EDL18835.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24, isoform CRA_b [Mus
musculus]
Length = 857
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 252 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 311
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 312 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 371
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 372 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 402
>gi|298712672|emb|CBJ48697.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 806
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/68 (51%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 1 MAEWVKFNIP--ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 58
MA W+ + ++ L+++GF PT IQ V+P A+L RKDI+GAAETGSGKTLAFG
Sbjct: 350 MAPWMYLGVELHPALLWHLHRQGFHDPTPIQRRVLPKAVLGRKDIIGAAETGSGKTLAFG 409
Query: 59 IPILTGIV 66
+P+L+ I+
Sbjct: 410 LPVLSEIL 417
>gi|356520440|ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine
max]
Length = 810
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 46/67 (68%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++A+ + GFK PT IQ +P+A KD+VGAAETGSGKTLAFG+PIL
Sbjct: 177 WNELRLHPLLLKAICKLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQ 236
Query: 64 GIVNKLE 70
++ + E
Sbjct: 237 RLLEERE 243
>gi|412987724|emb|CCO20559.1| predicted protein [Bathycoccus prasinos]
Length = 951
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A W ++++ +++A+ + F +PT IQ V+ A+ R DIVGAAETGSGKTLAFG+P
Sbjct: 221 VAAWAQYDLHPLLLKAIRKLRFTSPTPIQEKVLHPAIKGRMDIVGAAETGSGKTLAFGLP 280
Query: 61 ILTGIVN 67
IL ++
Sbjct: 281 ILQRLMQ 287
>gi|449705204|gb|EMD45301.1| ATP-dependent RNA helicase mak5, putative [Entamoeba histolytica
KU27]
Length = 600
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
M +W+K + + IIRALY GF PT+IQ + + AL KDIVG+A TGSGKTL+F I
Sbjct: 60 MKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTLSFLI 119
Query: 60 PILTGIVNKLENPTEEDENDSARKDIV 86
PI+ ++ E D+ DS + I+
Sbjct: 120 PIVQRLI-------ELDKTDSTQCVII 139
>gi|115459372|ref|NP_001053286.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|158513183|sp|A2XVF7.2|RH13_ORYSI RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|158513708|sp|A3AVH5.2|RH13_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|32488303|emb|CAE03369.1| OSJNBb0065L13.12 [Oryza sativa Japonica Group]
gi|113564857|dbj|BAF15200.1| Os04g0510400 [Oryza sativa Japonica Group]
gi|116311068|emb|CAH67998.1| OSIGBa0157K09-H0214G12.9 [Oryza sativa Indica Group]
Length = 832
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +I A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+PIL
Sbjct: 200 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 259
Query: 64 GIVNKLENPTEEDENDSARKD 84
++ + E D + +D
Sbjct: 260 RLLEEQEKAMRLSREDESTQD 280
>gi|407041314|gb|EKE40660.1| DEAD/DEAH box helicase, putative [Entamoeba nuttalli P19]
Length = 600
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
M +W+K + + IIRALY GF PT+IQ + + AL KDIVG+A TGSGKTL+F I
Sbjct: 60 MKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTLSFLI 119
Query: 60 PILTGIVNKLENPTEEDENDSARKDIV 86
PI+ ++ E D+ DS + I+
Sbjct: 120 PIVQRLI-------ELDKTDSTQCVII 139
>gi|294932199|ref|XP_002780153.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239890075|gb|EER11948.1| ATP-dependent RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 702
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 1 MAEW--VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLA-RKDIVGAAETGSGKTLAF 57
M EW + +IP+ I+ L GF PT+IQ +P ALL KDI+ AAETGSGKTLA+
Sbjct: 128 MNEWKSISSSIPDEILMGLKGLGFTIPTQIQRQSIPPALLPIGKDILAAAETGSGKTLAY 187
Query: 58 GIPILTGIVNKLENPTEEDEND 79
GIP+LT I+ + + +D+ND
Sbjct: 188 GIPLLTNILYMESSSSLKDDND 209
>gi|218195193|gb|EEC77620.1| hypothetical protein OsI_16604 [Oryza sativa Indica Group]
Length = 776
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +I A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+PIL
Sbjct: 144 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 203
Query: 64 GIVNKLENPTEEDENDSARKD 84
++ + E D + +D
Sbjct: 204 RLLEEQEKAMRLSREDESTQD 224
>gi|225433316|ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
gi|296083755|emb|CBI23744.3| unnamed protein product [Vitis vinifera]
Length = 788
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 48/72 (66%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
EW + + +++++++ GFK PT IQ +P+A KD+VGA+ETGSGKTLA G+PIL
Sbjct: 156 EWNELRLHPLLMKSIHRLGFKQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPIL 215
Query: 63 TGIVNKLENPTE 74
++ + E E
Sbjct: 216 QRLLEEREKAAE 227
>gi|67463088|ref|XP_648201.1| DEAD/DEAH box helicase [Entamoeba histolytica HM-1:IMSS]
gi|56464242|gb|EAL42815.1| DEAD/DEAH box helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 600
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
M +W+K + + IIRALY GF PT+IQ + + AL KDIVG+A TGSGKTL+F I
Sbjct: 60 MKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDIVGSAPTGSGKTLSFLI 119
Query: 60 PILTGIVNKLENPTEEDENDSARKDIV 86
PI+ ++ E D+ DS + I+
Sbjct: 120 PIVQRLI-------ELDKTDSTQCVII 139
>gi|222629189|gb|EEE61321.1| hypothetical protein OsJ_15428 [Oryza sativa Japonica Group]
Length = 776
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +I A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+PIL
Sbjct: 144 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 203
Query: 64 GIVNKLENPTEEDENDSARKD 84
++ + E D + +D
Sbjct: 204 RLLEEQEKAMRLSREDESTQD 224
>gi|147810431|emb|CAN65340.1| hypothetical protein VITISV_038405 [Vitis vinifera]
Length = 458
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
EW + I +++++++ GFK PT IQ +P+A KD+VGA+ETGSGKTLA G+PIL
Sbjct: 169 EWNELRIHPLLMKSIHRLGFKQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPIL 228
Query: 63 TGIVNKLENPTE 74
++ + E E
Sbjct: 229 QRLLEEREKAAE 240
>gi|74141078|dbj|BAE22104.1| unnamed protein product [Mus musculus]
Length = 622
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 252 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 311
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 312 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 371
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 372 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 402
>gi|255554328|ref|XP_002518204.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223542800|gb|EEF44337.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 496
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++++Y+ GFK PT IQ +P A KD++GAAETGSGKTLAFG+PIL
Sbjct: 161 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPPAAHQGKDVIGAAETGSGKTLAFGLPILQ 220
Query: 64 GIV 66
++
Sbjct: 221 RLL 223
>gi|328771868|gb|EGF81907.1| hypothetical protein BATDEDRAFT_10092 [Batrachochytrium
dendrobatidis JAM81]
Length = 529
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/72 (45%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
++W++F + +++ L++ GF PT IQ+ + + L+ KDI+GAAETGSGKTLAFG+PI
Sbjct: 148 SKWLEFGLNLQLVQTLHKLGFSCPTDIQAKSLENTLVRHKDIIGAAETGSGKTLAFGLPI 207
Query: 62 LTGIVNKLE-NP 72
L + +L+ NP
Sbjct: 208 LHHLAIQLQKNP 219
>gi|417405017|gb|JAA49234.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 863
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 50/216 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPKPVLRALSFLGFTAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 ILTGIVN-KLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEED- 118
++ ++ +++ P N +A GA GK A G L+G + P +
Sbjct: 250 MIHSVLQWQVKKPAPPLSNTAAAPGETGAEAGPPGKAGA-GTGALSGEIGIEGEPLPSEA 308
Query: 119 ---------------------------ENDSG--------------LEEEAEEVLEE--- 134
++D+G +E+ +E L+E
Sbjct: 309 GTKPGAPPSKARAKTGAAVSDQVLPFCDDDAGEGPSSLIRETPVPKQDEDRQEKLDEEWT 368
Query: 135 --LEEESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
LE+E T K + L L+L PTRELA+Q
Sbjct: 369 GKLEQELGGETVTCKAHPKRPLLGLVLTPTRELAVQ 404
>gi|336375445|gb|EGO03781.1| hypothetical protein SERLA73DRAFT_46424 [Serpula lacrymans var.
lacrymans S7.3]
Length = 615
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W +++ +++ L+ +GF TPT IQS +P A+ R DIVG AETGSGKTLA+G+P
Sbjct: 31 LPNWHSYSLHPHLLQILHHQGFTTPTPIQSKSLPKAMEGR-DIVGVAETGSGKTLAYGLP 89
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPI-LTGIVNKLENPTEEDE 119
IL ++++ +P+ S K V A + LA + L +E P +E+
Sbjct: 90 ILHHLLSRSRHPS------SKVKRQVQALVLAPTRELALQVSDHLNMFARSIEAPIKEET 143
Query: 120 NDSGLEEEAE 129
D L E +
Sbjct: 144 LDVELSETQQ 153
>gi|409076944|gb|EKM77312.1| hypothetical protein AGABI1DRAFT_43493, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 670
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 11/130 (8%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW +++ ++ ALY+KGF++PT IQ+ +P A+ KD+VG A+TGSGKTLA+GIP
Sbjct: 2 LPEWASYSLHPQLLHALYRKGFESPTSIQAAAIPVAVKG-KDVVGVAQTGSGKTLAYGIP 60
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
IL + L P K ++ A + LA + + +N+ NPT+ D +
Sbjct: 61 ILHYL---LSQPRPHPNKRRPVKALILAPT----RELALQV---SSHLNECLNPTDRDTS 110
Query: 121 DSGLEEEAEE 130
+ E +E
Sbjct: 111 ATQNENNPDE 120
>gi|302781030|ref|XP_002972289.1| hypothetical protein SELMODRAFT_97519 [Selaginella
moellendorffii]
gi|300159756|gb|EFJ26375.1| hypothetical protein SELMODRAFT_97519 [Selaginella
moellendorffii]
Length = 524
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++ AL GF TPT IQ +P+A KD++GAAETGSGKTLAFGIPIL
Sbjct: 1 WNELRLHPSLLTALSTLGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPILQ 60
Query: 64 GIVN 67
+++
Sbjct: 61 RLLD 64
>gi|156103333|ref|XP_001617359.1| ATP-dependent RNA helicase [Plasmodium vivax Sal-1]
gi|148806233|gb|EDL47632.1| ATP-dependent RNA helicase, putative [Plasmodium vivax]
Length = 717
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 37/171 (21%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
+ + + N E ++ L K FK PT IQ + P AL + KD++G AETGSGKTLAF +P
Sbjct: 278 SSFSEVNFHEAVVNHLNAK-FKEPTAIQKVTWPIAL-SGKDLIGVAETGSGKTLAFALPA 335
Query: 62 LTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEND 121
L I+ + E E S R+ +G+ N E+ E+++ D
Sbjct: 336 LMHILKQ-----REGERKSGRE---------------------SGLENAREHRLEQNQED 369
Query: 122 SGLEEEAEEVLEE-----LEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
G EE ++E E + S N T ++T +Y LIL PTREL +Q
Sbjct: 370 MG-EEPSQEWNNEPTQGATQRSSGNDTHEAERT---VYGLILLPTRELCMQ 416
>gi|317059228|ref|ZP_07923713.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_5R]
gi|313684904|gb|EFS21739.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_5R]
Length = 528
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + I E +++AL +KG++TPT IQS+ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGIGEKLLKALSKKGYETPTPIQSLTIPALLTGEKDIIGQAQTGTGKTAAFALP 66
Query: 61 ILTGI 65
IL I
Sbjct: 67 ILENI 71
>gi|354489656|ref|XP_003506977.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
gi|344257276|gb|EGW13380.1| ATP-dependent RNA helicase DDX24 [Cricetulus griseus]
Length = 853
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/205 (29%), Positives = 98/205 (47%), Gaps = 39/205 (19%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ +P A+ + DI+GAAETGSGKTLAF IP
Sbjct: 194 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLPPAIRDKLDILGAAETGSGKTLAFAIP 253
Query: 61 ILTGIV--NKLENPTEEDENDSARKDI-VG-AAETGSGKTLAFGIPILTGIVNKLENPTE 116
++ ++ +K++ P + +++ VG AA GS +L ++EN
Sbjct: 254 MIHAVLQWHKMKVPPIPNGTGVPLRELRVGAAAHLGSPPREGTESAVLQDAA-RIENEAH 312
Query: 117 E--------------DENDSG-----------LEEEAEEVLEELEEESANTTE------- 144
D D+G + ++ ++ E+L+EE A +
Sbjct: 313 PKTSASASAQALLSCDGGDAGEGPSSLVEDKLIPKQDDDREEKLDEEQAGKLKQGLCDRI 372
Query: 145 --FVKKTRNKLYALILAPTRELAIQ 167
+ R L L+L PTRELA+Q
Sbjct: 373 AIYRVHPRRPLLGLVLTPTRELAVQ 397
>gi|315917704|ref|ZP_07913944.1| ATP-dependent RNA helicase [Fusobacterium gonidiaformans ATCC
25563]
gi|313691579|gb|EFS28414.1| ATP-dependent RNA helicase [Fusobacterium gonidiaformans ATCC
25563]
Length = 528
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + I E +++AL +KG++TPT IQS+ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGIGEKLLKALSKKGYETPTPIQSLTIPALLTGEKDIIGQAQTGTGKTAAFALP 66
Query: 61 ILTGI 65
IL I
Sbjct: 67 ILENI 71
>gi|393212749|gb|EJC98248.1| DEAD-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 718
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW F++ ++ AL+ + F TPT IQ +P AL KD+VG A+TGSGKTLA+G+P
Sbjct: 117 LPEWSDFSLHARLLSALHSQKFATPTPIQRSAIPVALKG-KDVVGVAQTGSGKTLAYGLP 175
Query: 61 ILTGIVN 67
IL ++
Sbjct: 176 ILNHLLQ 182
>gi|348686576|gb|EGZ26391.1| hypothetical protein PHYSODRAFT_480097 [Phytophthora sojae]
Length = 793
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W KF + ++++L GF PT+IQ + AL+ +D+VGAA TGSGKTLAFG+P
Sbjct: 131 LPKWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGAAPTGSGKTLAFGLP 190
Query: 61 ILTGIVNKLENP 72
IL+ ++++ E P
Sbjct: 191 ILSQLLHEREQP 202
>gi|291280174|ref|YP_003497009.1| ATP-dependent RNA helicase DEAD/DEAH box family [Deferribacter
desulfuricans SSM1]
gi|290754876|dbj|BAI81253.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Deferribacter
desulfuricans SSM1]
Length = 525
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M E+ K + ++I+ AL +KGF+ PT IQ +V+P L + KDIV A+TG+GKT AFGIP
Sbjct: 4 MKEFEKLGVSKSILEALKKKGFEEPTDIQKLVIPKILNSDKDIVAQAQTGTGKTAAFGIP 63
Query: 61 IL-------TGIVNKLENPTEEDENDSA 81
++ +G+ + PT E N A
Sbjct: 64 LIEMIDRKKSGVKCLILTPTRELANQVA 91
>gi|74147720|dbj|BAE38731.1| unnamed protein product [Mus musculus]
Length = 792
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 59/212 (27%), Positives = 93/212 (43%), Gaps = 45/212 (21%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 252 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 311
Query: 78 NDSARKDIVGAAETGSGKTLAF-GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELE 136
+DS + + + S +TL G + +E +N+ G E+ E +L+
Sbjct: 312 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLVEEKPVPKQNEDGEEKFDAEQAGKLK 371
Query: 137 EESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
+E + K R L L+L PTRELAIQ
Sbjct: 372 QELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 403
>gi|335292920|ref|XP_003356831.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Sus scrofa]
Length = 856
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 97/213 (45%), Gaps = 49/213 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 IL------------TGIVNKLENPTEEDEND---------------SARKDIVG------ 87
++ T +++ P EE + A D +G
Sbjct: 250 MIHAVLQWQVKKKPTPVLSTTGAPPEETSTEPGAEIGSPGRAGTESGALPDKIGIDSEAL 309
Query: 88 AAETGSGKTLAFGIPIL------------TGIVNKLENPTEEDENDSGLEEEAE-EVLEE 134
+E G+ + +L + ++ + P +++ + L+EE E+ +E
Sbjct: 310 PSEAGAKTSATTADQVLPSHDADDAGEGPSSLIREKPVPKQDENKEEKLDEEHSGELKQE 369
Query: 135 LEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
L + A + K+ L L+L PTRELA+Q
Sbjct: 370 LNSKIATSEAHPKRP---LLGLVLTPTRELAVQ 399
>gi|167385322|ref|XP_001737297.1| ATP-dependent RNA helicase mak5 [Entamoeba dispar SAW760]
gi|165899942|gb|EDR26421.1| ATP-dependent RNA helicase mak5, putative [Entamoeba dispar SAW760]
Length = 586
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
M +W+K + + IIRALY GF PT+IQ + + AL KD+VG+A TGSGKTL+F I
Sbjct: 46 MKKWMKLYKLDLRIIRALYDLGFINPTEIQQLSIKKALKFHKDVVGSAPTGSGKTLSFLI 105
Query: 60 PILTGIV 66
PI+ ++
Sbjct: 106 PIVQRLI 112
>gi|340754860|ref|ZP_08691593.1| ATP-dependent RNA helicase [Fusobacterium sp. D12]
gi|421501471|ref|ZP_15948434.1| DEAD/DEAH box helicase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
gi|313686421|gb|EFS23256.1| ATP-dependent RNA helicase [Fusobacterium sp. D12]
gi|402265834|gb|EJU15289.1| DEAD/DEAH box helicase [Fusobacterium necrophorum subsp.
funduliforme Fnf 1007]
Length = 528
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ I E +++AL +KG++TPT IQS+ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGIGEKLLKALSKKGYETPTPIQSLTIPALLTGEKDIIGQAQTGTGKTAAFALP 66
Query: 61 ILTGI 65
IL I
Sbjct: 67 ILENI 71
>gi|426248528|ref|XP_004018015.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Ovis aries]
Length = 852
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 93/209 (44%), Gaps = 46/209 (22%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 ILTGIVNKL--ENPTEEDENDSARK----DIVGAA------ETGS-GKTLAFGIPILTGI 107
++ ++ + PT N +A D GAA E GS G+ L + TG
Sbjct: 250 MIDAVLRWQVKKKPTPALRNTAAPPGETGDEAGAASGALPDEIGSEGEALPSEVGAKTGT 309
Query: 108 ---------------------VNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFV 146
V+ E P+ +E ++V E+ T V
Sbjct: 310 PPSQAGTSTGAACSDQGRDGDVDAGEGPSSLMREKPIPNQEGDQV----EKHDGEQTGKV 365
Query: 147 KK--------TRNKLYALILAPTRELAIQ 167
K+ R L L+L PTRELA+Q
Sbjct: 366 KRGLGGSAVPPRRPLLGLVLTPTRELAVQ 394
>gi|373111868|ref|ZP_09526104.1| hypothetical protein HMPREF9466_00137 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|419840557|ref|ZP_14363945.1| DEAD/DEAH box helicase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
gi|371656727|gb|EHO22048.1| hypothetical protein HMPREF9466_00137 [Fusobacterium necrophorum
subsp. funduliforme 1_1_36S]
gi|386907500|gb|EIJ72207.1| DEAD/DEAH box helicase [Fusobacterium necrophorum subsp.
funduliforme ATCC 51357]
Length = 528
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ I E +++AL +KG++TPT IQS+ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGIGEKLLKALSKKGYETPTPIQSLTIPALLTGEKDIIGQAQTGTGKTAAFALP 66
Query: 61 ILTGI 65
IL I
Sbjct: 67 ILENI 71
>gi|344273652|ref|XP_003408633.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Loxodonta
africana]
Length = 858
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +PE ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 187 VSAWKNLFVPEGVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 246
Query: 61 ILTGIVN 67
++ ++
Sbjct: 247 MIHAVLQ 253
>gi|301103398|ref|XP_002900785.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262101540|gb|EEY59592.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 763
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/72 (44%), Positives = 50/72 (69%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W KF + ++++L GF PT+IQ + AL+ +D+VGAA TGSGKTLAFG+P
Sbjct: 111 LPKWNKFKLHPLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGAAPTGSGKTLAFGLP 170
Query: 61 ILTGIVNKLENP 72
IL+ ++++ E P
Sbjct: 171 ILSQLLHEREQP 182
>gi|320165920|gb|EFW42819.1| ATP-dependent RNA helicase DDX24 [Capsaspora owczarzaki ATCC 30864]
Length = 1137
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EW F + E +I+ L G+ PT IQ + L +DI+GA+ETGSGKTLAF +P
Sbjct: 431 MSEWNGFGLHELLIKGLATAGYARPTPIQREALLKGLRDYQDIIGASETGSGKTLAFALP 490
Query: 61 ILTGIVN 67
IL I+N
Sbjct: 491 ILQVILN 497
>gi|227202696|dbj|BAH56821.1| AT3G16840 [Arabidopsis thaliana]
Length = 827
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 190 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 249
Query: 61 ILTGIVNKLE 70
IL ++++ E
Sbjct: 250 ILQRLLDERE 259
>gi|440905703|gb|ELR56052.1| ATP-dependent RNA helicase DDX24 [Bos grunniens mutus]
Length = 850
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 47/211 (22%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 ILTGI------------VNKLENPTEEDENDS-----ARKDIVG----------AAETGS 93
++ + ++ P E N++ A D +G A+TG
Sbjct: 250 MIDAVLRWQVKKKPTPAISNTGAPPGETGNEARAAPGALPDEIGIEGEAPPSEVGAKTGP 309
Query: 94 GKTLAF----------GIPILTGIVNKLENPTE-------EDENDSGLEEEAEEVLEELE 136
+ A G+ G + E P+ ++ D+ +E+ EE +L+
Sbjct: 310 PPSQAGTSIGAAASDPGLLSRDGDGDAGEGPSSLIREKPTPEQEDNQVEKHDEEQAGKLK 369
Query: 137 EESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+E +T K+ L L+L PTRELA+Q
Sbjct: 370 QELGGSTVPPKRP---LLGLVLTPTRELAVQ 397
>gi|79404523|ref|NP_188307.3| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
gi|374095486|sp|Q93Y39.3|RH13_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 13
gi|332642351|gb|AEE75872.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis thaliana]
Length = 826
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 61 ILTGIVNKLE 70
IL ++++ E
Sbjct: 249 ILQRLLDERE 258
>gi|145353253|ref|XP_001420934.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581170|gb|ABO99227.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 394
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +F++ I+RA+ GF TPT IQ + A R DI+GAA+TGSGKTLAF +P
Sbjct: 16 VSAWFEFDLHPLIMRAIQDCGFTTPTPIQRECLLPATKGRCDIIGAAQTGSGKTLAFALP 75
Query: 61 ILTGIVNK 68
IL ++++
Sbjct: 76 ILQRLLSQ 83
>gi|410962873|ref|XP_003987993.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Felis catus]
Length = 856
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 92/206 (44%), Gaps = 43/206 (20%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP++
Sbjct: 192 WKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIH 251
Query: 64 GIVN---------KLENP--------TEEDENDSARKDIVGA------AETGSGKTLAFG 100
++ L NP TE D +G +E G K A
Sbjct: 252 AVLQWQVKKKPTPTLGNPGALPSEAGTEAGTESGVLPDEIGTEGEALPSEAGV-KARAPP 310
Query: 101 IPILTG-IVNKLENPTEEDENDSG------------LEEEAEEVLEE-----LEEESANT 142
I TG V+ P +D+ G +E EE L+E L++E
Sbjct: 311 SKIETGAAVSDRALPLCDDDAGEGPSSLIRERAIPKQDEGKEEKLDEEQTGGLKQELGGK 370
Query: 143 TEFVK-KTRNKLYALILAPTRELAIQ 167
T K + L L+L PTRELA+Q
Sbjct: 371 TATCKAHPKRPLLGLVLTPTRELAVQ 396
>gi|297834580|ref|XP_002885172.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
gi|297331012|gb|EFH61431.1| DEAD-box ATP-dependent RNA helicase 13 [Arabidopsis lyrata subsp.
lyrata]
Length = 831
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +++++Y GFK PT+IQ A KD++GAAETGSGKTLAFG+P
Sbjct: 187 FSAWGLMRLHPLLMKSIYHLGFKQPTEIQKACFSIAAYQGKDVIGAAETGSGKTLAFGLP 246
Query: 61 ILTGIVNKLE 70
IL ++++ E
Sbjct: 247 ILQRLLDERE 256
>gi|384498821|gb|EIE89312.1| hypothetical protein RO3G_14023 [Rhizopus delemar RA 99-880]
Length = 808
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W F + + I+ AL F +PT IQ +P AL R DIVG+AETGSGKTLAFGIP
Sbjct: 250 VSAWKDFELAQPIVNALKYHKFSSPTPIQEKTLPLALQGR-DIVGSAETGSGKTLAFGIP 308
Query: 61 IL 62
I+
Sbjct: 309 IV 310
>gi|15450790|gb|AAK96666.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 797
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 61 ILTGIVNKLE 70
IL ++++ E
Sbjct: 249 ILQRLLDERE 258
>gi|301777516|ref|XP_002924172.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Ailuropoda
melanoleuca]
gi|281354104|gb|EFB29688.1| hypothetical protein PANDA_013454 [Ailuropoda melanoleuca]
Length = 853
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP++
Sbjct: 192 WKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIH 251
Query: 64 GIVN-KLENPT 73
++ +++ PT
Sbjct: 252 AVLQWQVKKPT 262
>gi|7939577|dbj|BAA95778.1| ATP-dependent RNA helicase [Arabidopsis thaliana]
Length = 832
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 61 ILTGIVNKLE 70
IL ++++ E
Sbjct: 249 ILQRLLDERE 258
>gi|302804899|ref|XP_002984201.1| hypothetical protein SELMODRAFT_119748 [Selaginella
moellendorffii]
gi|300148050|gb|EFJ14711.1| hypothetical protein SELMODRAFT_119748 [Selaginella
moellendorffii]
Length = 521
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++RAL GF TPT IQ +P+A KD++GAAETGSGKTLAFGIPIL
Sbjct: 1 WNELRLHPSLLRALSILGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPILQ 60
Query: 64 GIVNK 68
++++
Sbjct: 61 RLLDE 65
>gi|402225555|gb|EJU05616.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 752
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW F + I R+L+ GF PT+IQS +P AL R DI+G AETGSGKTLA+G+P
Sbjct: 160 IPEWQLFPLKNQIKRSLHGLGFTKPTEIQSRSIPIALQGR-DIIGVAETGSGKTLAYGLP 218
Query: 61 ILTGIVNK 68
I+ ++ K
Sbjct: 219 IINQLLVK 226
>gi|395827747|ref|XP_003787057.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Otolemur garnettii]
Length = 861
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIVN 67
++ ++
Sbjct: 249 VIHAVLQ 255
>gi|440638151|gb|ELR08070.1| hypothetical protein GMDG_02897 [Geomyces destructans 20631-21]
Length = 741
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 3/83 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M EW + N+ ++ AL + GF TPT IQ +P +L+ D++G A TGSGKTLAFGIP
Sbjct: 212 MTEWAELNLSTAMLSALAKIGFTTPTPIQQEAIPE-VLSGNDVIGKASTGSGKTLAFGIP 270
Query: 61 ILTGIVNKLENPTEEDENDSARK 83
I+ + +N EDE + +K
Sbjct: 271 IIERWLQ--DNEGREDETATEKK 291
>gi|336322978|ref|YP_004602945.1| DEAD/DEAH box helicase [Flexistipes sinusarabici DSM 4947]
gi|336106559|gb|AEI14377.1| DEAD/DEAH box helicase domain protein [Flexistipes sinusarabici
DSM 4947]
Length = 527
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 46/59 (77%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
+ E ++R++ +KGF+ PT IQ+ V+P+ L + KD+VG A+TG+GKT AFG+PI+ IV+
Sbjct: 12 LSENLLRSVKKKGFEEPTPIQAQVIPTLLKSEKDVVGQAQTGTGKTAAFGLPIMDRIVS 70
>gi|224107545|ref|XP_002314517.1| predicted protein [Populus trichocarpa]
gi|222863557|gb|EEF00688.1| predicted protein [Populus trichocarpa]
Length = 847
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 50/75 (66%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +++++Y+ GFK PT IQ +P+A KD+VGAAETGSGKTLAFG+PIL
Sbjct: 164 WNELRLHPLLMKSIYRLGFKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQ 223
Query: 64 GIVNKLENPTEEDEN 78
++ + + + +N
Sbjct: 224 RLLEEQDKASNMGDN 238
>gi|348553728|ref|XP_003462678.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Cavia porcellus]
Length = 841
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 36/200 (18%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLVPAIRDRLDILGAAETGSGKTLAFAIP 249
Query: 61 IL-----------------TGIVNKLENPTEEDENDSA-RKDIVGAAETGSGKTLAFGIP 102
++ TG+ P+ E +S D GA P
Sbjct: 250 MIHAVLQWQKRKTSPTAGHTGVSPGETGPSGEAGPESGVLPDEAGAEAVVLPARANISAP 309
Query: 103 IL--------------TGIVNKLENPTEEDENDSGLE-EEAEEVLEELEEESANTTEFVK 147
+ + ++ + P + ++ + L+ E+ E+ +EL+ ++A K
Sbjct: 310 VSDQALLCDDDAGEGPSSLIKEKSVPEQTEDEEKMLDGEQTGELKKELDGKTATCGTHPK 369
Query: 148 KTRNKLYALILAPTRELAIQ 167
+ L L+L PTRELA+Q
Sbjct: 370 R---PLLGLVLTPTRELAVQ 386
>gi|392561989|gb|EIW55170.1| DEAD-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 677
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F + + R+LY + F PT IQ+ +P AL R D+VG AETGSGKTLA+G+PIL
Sbjct: 38 WNTFQLHPQLARSLYARKFTEPTPIQAQTLPLALKNR-DVVGVAETGSGKTLAYGLPILH 96
Query: 64 GIV 66
++
Sbjct: 97 HLL 99
>gi|149737471|ref|XP_001498017.1| PREDICTED: ATP-dependent RNA helicase DDX24 [Equus caballus]
Length = 857
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 189 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 248
Query: 61 ILTGIVN 67
++ ++
Sbjct: 249 MIHAVLQ 255
>gi|392589213|gb|EIW78544.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 740
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W F + +++ L+ K FK+PT IQS +P A+ A KDIVG AETGSGKTLA+G+P
Sbjct: 132 LPSWRPFKLHPHLLQVLHSKNFKSPTPIQSNSLPKAI-AGKDIVGVAETGSGKTLAYGLP 190
Query: 61 ILTGIVNKLENPTEEDENDSARKDI 85
IL I+ P E+ S+++ +
Sbjct: 191 ILQHILTS-PRPVLSTESGSSKRQL 214
>gi|296215803|ref|XP_002754286.1| PREDICTED: ATP-dependent RNA helicase DDX24 isoform 1 [Callithrix
jacchus]
Length = 856
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 190 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 249
Query: 61 ILTGIVN 67
++ ++
Sbjct: 250 MIHAVLQ 256
>gi|357167963|ref|XP_003581416.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like
[Brachypodium distachyon]
Length = 872
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W++ + +++A+++ GFK PT IQ P+ KD++GAAETGSGKTLAFG+PIL
Sbjct: 240 WLELRLHPLLVKAMHRLGFKEPTPIQKACFPAGAHQGKDVIGAAETGSGKTLAFGLPILQ 299
Query: 64 GIVNKLENPTEEDEND 79
++ + E T + D
Sbjct: 300 RLLEEREKATRLNVED 315
>gi|260944756|ref|XP_002616676.1| hypothetical protein CLUG_03917 [Clavispora lusitaniae ATCC
42720]
gi|238850325|gb|EEQ39789.1| hypothetical protein CLUG_03917 [Clavispora lusitaniae ATCC
42720]
Length = 598
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
++W FN+ +++A+ GFK PT IQS +P AL ++DI+ + TGSGKT A+ IPI
Sbjct: 14 SKWESFNLDPRLLQAIDHLGFKYPTLIQSSAIPLALEEKRDIIAKSSTGSGKTAAYCIPI 73
Query: 62 LTGIVNKLENPTEEDENDSARKDIV 86
L I+ + E+ N+ + K I+
Sbjct: 74 LQNII------STENSNEKSVKSII 92
>gi|449544539|gb|EMD35512.1| hypothetical protein CERSUDRAFT_139322 [Ceriporiopsis subvermispora
B]
Length = 783
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W +F++ + RA+Y + F PT IQ+ +P A+ R DIVG AETGSGKTLA+G+P
Sbjct: 134 LPNWREFSLHPQLNRAVYAQKFSKPTPIQAEALPLAMQGR-DIVGVAETGSGKTLAYGLP 192
Query: 61 IL 62
IL
Sbjct: 193 IL 194
>gi|156084736|ref|XP_001609851.1| DEAD box RNA helicase [Babesia bovis T2Bo]
gi|154797103|gb|EDO06283.1| DEAD box RNA helicase, putative [Babesia bovis]
Length = 714
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + N+P ++RA+ GFK+PT IQ +P L R D++G AETGSGKT+AF +P
Sbjct: 296 MRTWAESNLPSELLRAIKDAGFKSPTPIQMQAIPIGLGMR-DLIGLAETGSGKTVAFVLP 354
Query: 61 ILTGI 65
+LT +
Sbjct: 355 MLTYV 359
>gi|391340745|ref|XP_003744697.1| PREDICTED: ATP-dependent RNA helicase DDX24-like [Metaseiulus
occidentalis]
Length = 757
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
EW F I I++AL Q + P++IQS + A+ R DI+GAAETGSGKTLAFGIP++
Sbjct: 250 EWEIFEIEPRILKALAQLRYTEPSEIQSQCLIPAIRDRLDILGAAETGSGKTLAFGIPLV 309
Query: 63 TGIVN 67
++
Sbjct: 310 HRLLQ 314
>gi|431839233|gb|ELK01160.1| ATP-dependent RNA helicase DDX24 [Pteropus alecto]
Length = 822
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 188 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 247
Query: 61 ILTGIVN-KLENPT 73
++ ++ +++ PT
Sbjct: 248 MIHLVLQCQVKKPT 261
>gi|357601923|gb|EHJ63191.1| hypothetical protein KGM_14588 [Danaus plexippus]
Length = 829
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 6/110 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + N E I+ + + G+K+PT IQ +P L R DI+G AETGSGKTLAF IP+LT
Sbjct: 403 WKEANFHEDIMEIISKVGYKSPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLT 461
Query: 64 GIVNKLENPTEEDENDSARKDIVGA----AETGSGKTLAFGIPI-LTGIV 108
I + +N ED + I+ A+ +T FGIP+ +T +V
Sbjct: 462 WIQSLPKNERMEDADQGPYAIILAPTRELAQQIEEETNKFGIPLGITSVV 511
>gi|299742573|ref|XP_001832577.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
gi|298405246|gb|EAU89326.2| ATP-dependent RNA helicase MAK5 [Coprinopsis cinerea okayama7#130]
Length = 759
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW + + R+++ + F PT+IQ +P AL R D+VG A+TGSGKTLA+G+P
Sbjct: 151 LPEWHPLGLHPRLTRSIHARNFSKPTEIQKEAIPLALQGR-DVVGVAQTGSGKTLAYGLP 209
Query: 61 ILTGIVNK 68
IL ++N+
Sbjct: 210 ILHTLLNQ 217
>gi|452950184|gb|EME55648.1| ATP-dependent RNA helicase [Amycolatopsis decaplanina DSM 44594]
Length = 499
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +PE ++RAL G TP IQS +P AL R D++G A+TGSGKTLAFG+ +LT
Sbjct: 43 WAELGLPEPLLRALADAGITTPFPIQSATIPDALSGR-DVLGRAQTGSGKTLAFGLAMLT 101
>gi|393245470|gb|EJD52980.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 736
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW FN+ + AL+ K F +PT IQS +P A+ R DI+G AETGSGKTLA+G+P
Sbjct: 134 LPEWAPFNLHAQLAAALHHKKFASPTSIQSQAIPKAVEGR-DIIGVAETGSGKTLAYGLP 192
Query: 61 ILTGIVNKLENP 72
IL ++ P
Sbjct: 193 ILHHLLTTPRPP 204
>gi|313672966|ref|YP_004051077.1| dead/deah box helicase domain-containing protein
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939722|gb|ADR18914.1| DEAD/DEAH box helicase domain protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 528
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M E KF + E +++AL +KGF+ PT IQ +V+P L +DIVG A+TG+GKT AF
Sbjct: 1 MNELTKFKELGLSENVLKALSKKGFEEPTPIQELVIPKLLQGERDIVGQAQTGTGKTAAF 60
Query: 58 GIPIL 62
G+P++
Sbjct: 61 GLPLI 65
>gi|291413819|ref|XP_002723168.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Oryctolagus
cuniculus]
Length = 848
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 187 VSAWKDLFVPTPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 246
Query: 61 ILTGIVN 67
++ ++
Sbjct: 247 MIHAVLQ 253
>gi|227495476|ref|ZP_03925792.1| superfamily II helicase [Actinomyces coleocanis DSM 15436]
gi|226831023|gb|EEH63406.1| superfamily II helicase [Actinomyces coleocanis DSM 15436]
Length = 616
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + N+PE ++ A+ + GF+TPT IQ +P LL +DIVG A+TG+GKT AFG+P
Sbjct: 4 MTTFADLNLPENVLSAITEMGFETPTPIQEQAIPH-LLEGRDIVGIAQTGTGKTAAFGLP 62
Query: 61 ILTGI 65
+L I
Sbjct: 63 MLAHI 67
>gi|297620018|ref|YP_003708123.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
voltae A3]
gi|297378995|gb|ADI37150.1| DEAD/DEAH box helicase domain protein [Methanococcus voltae A3]
Length = 584
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 44/68 (64%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
E+ NI E+I+ L +KGF T+IQ +P L D+VG A+TG+GKTLAFGIPI+
Sbjct: 2 EFRDLNISESIMERLDEKGFTEATQIQEKAIPIVLDTELDVVGQAQTGTGKTLAFGIPII 61
Query: 63 TGIVNKLE 70
I K+E
Sbjct: 62 QKIQEKIE 69
>gi|302826717|ref|XP_002994766.1| hypothetical protein SELMODRAFT_39973 [Selaginella
moellendorffii]
gi|300136923|gb|EFJ04167.1| hypothetical protein SELMODRAFT_39973 [Selaginella
moellendorffii]
Length = 57
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 39/51 (76%)
Query: 12 TIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+++RAL GF TPT IQ +P+A KD++GAAETGSGKTLAFGIPIL
Sbjct: 4 SLLRALSILGFTTPTPIQKACIPAAAHKGKDVIGAAETGSGKTLAFGIPIL 54
>gi|159463472|ref|XP_001689966.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283954|gb|EDP09704.1| predicted protein [Chlamydomonas reinhardtii]
Length = 468
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W +F + ++ L GF PT IQ + A+ AR DI+GAA+TGSGKTLAFG+P
Sbjct: 128 MSAWEEFELAGGVLAGLAALGFANPTPIQRECLGPAIRARADIIGAAQTGSGKTLAFGLP 187
Query: 61 IL 62
IL
Sbjct: 188 IL 189
>gi|345803790|ref|XP_537542.3| PREDICTED: ATP-dependent RNA helicase DDX24 [Canis lupus
familiaris]
Length = 852
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP++
Sbjct: 192 WKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIH 251
Query: 64 GIVN 67
++
Sbjct: 252 TVLQ 255
>gi|408393250|gb|EKJ72515.1| hypothetical protein FPSE_07152 [Fusarium pseudograminearum CS3096]
Length = 781
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA WV N+ II A+ + F PTKIQ +P ++A D++G A+TGSGKTLAFGIP
Sbjct: 214 MAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE-IVAGHDVIGKAQTGSGKTLAFGIP 272
Query: 61 IL 62
++
Sbjct: 273 MV 274
>gi|255718883|ref|XP_002555722.1| KLTH0G15840p [Lachancea thermotolerans]
gi|238937106|emb|CAR25285.1| KLTH0G15840p [Lachancea thermotolerans CBS 6340]
Length = 797
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ +W + N+ T ++ L +GF PT IQSM +P AL KDI+G A TGSGKTLA+GI
Sbjct: 220 LPQWTETMNLSMTTLQGLAAQGFTKPTDIQSMTIPPALEG-KDIMGKASTGSGKTLAYGI 278
Query: 60 PILTGIV 66
PIL +V
Sbjct: 279 PILERLV 285
>gi|451334917|ref|ZP_21905487.1| ATP-dependent RNA helicase [Amycolatopsis azurea DSM 43854]
gi|449422456|gb|EMD27830.1| ATP-dependent RNA helicase [Amycolatopsis azurea DSM 43854]
Length = 500
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +P+ ++RAL G TP IQS +P AL R D++G A+TGSGKTLAFG+ +LT
Sbjct: 43 WAELGLPDPLLRALADAGITTPFPIQSATIPDALAGR-DVLGRAQTGSGKTLAFGLAMLT 101
>gi|46121917|ref|XP_385512.1| hypothetical protein FG05336.1 [Gibberella zeae PH-1]
Length = 783
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA WV N+ II A+ + F PTKIQ +P ++A D++G A+TGSGKTLAFGIP
Sbjct: 214 MAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE-IVAGHDVIGKAQTGSGKTLAFGIP 272
Query: 61 IL 62
++
Sbjct: 273 MV 274
>gi|380302038|ref|ZP_09851731.1| DNA/RNA helicase, superfamily II [Brachybacterium squillarum M-6-3]
Length = 594
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F++ E I+ AL KG P IQSM +P AL R DI+G A+TG+GKTL FGIP+L
Sbjct: 46 FADFDVREDIVEALSSKGIIHPFPIQSMTLPVALKGR-DIIGQAKTGTGKTLGFGIPLLQ 104
Query: 64 GIVNKLE-NPT 73
V E NPT
Sbjct: 105 STVAPGEDNPT 115
>gi|168023770|ref|XP_001764410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684274|gb|EDQ70677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 50/88 (56%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W + + ++RAL + F PT IQ + +A KD++GAAETGSGKTLAFG+P
Sbjct: 105 MSAWAQLRLNPLLMRALMKLKFSKPTHIQEKCIAAAAYQGKDVIGAAETGSGKTLAFGLP 164
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGA 88
IL +++ E + D A K G
Sbjct: 165 ILQRLLDDHEKIQRKSGFDKASKKQSGG 192
>gi|150401787|ref|YP_001325553.1| DEAD/DEAH box helicase [Methanococcus aeolicus Nankai-3]
gi|150014490|gb|ABR56941.1| DEAD/DEAH box helicase domain protein [Methanococcus aeolicus
Nankai-3]
Length = 529
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M E+++ + E + AL +KGFK PT IQ +P L D+VG A+TG+GKT AFG+P
Sbjct: 3 MTEFLELGLCENTVEALEKKGFKHPTPIQKKAIPMLLDGDYDVVGQAQTGTGKTAAFGLP 62
Query: 61 ILTGIVNKLENPTEE 75
I+ KLEN +E
Sbjct: 63 ----IIEKLENTDKE 73
>gi|308498215|ref|XP_003111294.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
gi|308240842|gb|EFO84794.1| hypothetical protein CRE_03826 [Caenorhabditis remanei]
Length = 761
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 19/87 (21%)
Query: 7 FNIPETIIRALYQKGFKT----------------PTKIQSMVMPSALLARKDIVGAAETG 50
F +P I++A+ Q GF + PT IQS V+P A+ +D++GAAETG
Sbjct: 160 FFLPNEILQAVEQMGFVSCAELTKLSKFLFSFSEPTPIQSAVLPVAVRDHQDVLGAAETG 219
Query: 51 SGKTLAFGIPILTGIVNKLENPTEEDE 77
SGKTLAFGIPI+ + LE+ E DE
Sbjct: 220 SGKTLAFGIPIVARL---LESSAENDE 243
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 46/86 (53%), Gaps = 30/86 (34%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
+D++GAAETGSGKTLAFGIPI+ + LE+ E DE EEE
Sbjct: 209 HQDVLGAAETGSGKTLAFGIPIVARL---LESSAENDE-----EEE-------------- 246
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
K R AL++APTREL IQ
Sbjct: 247 ----FKGPR----ALVIAPTRELVIQ 264
>gi|410516913|sp|Q4IBS2.2|MAK5_GIBZE RecName: Full=ATP-dependent RNA helicase MAK5
Length = 781
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA WV N+ II A+ + F PTKIQ +P ++A D++G A+TGSGKTLAFGIP
Sbjct: 214 MAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE-IVAGHDVIGKAQTGSGKTLAFGIP 272
Query: 61 IL 62
++
Sbjct: 273 MV 274
>gi|145596599|ref|YP_001160896.1| DEAD/DEAH box helicase [Salinispora tropica CNB-440]
gi|145305936|gb|ABP56518.1| DEAD/DEAH box helicase domain protein [Salinispora tropica
CNB-440]
Length = 461
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ +P+ ++R L ++G TP +IQ MP AL R D++G +TGSGKTLAFG+P
Sbjct: 8 LVDFAALGLPQPLVRELARQGITTPFEIQRATMPDALAGR-DVLGRGQTGSGKTLAFGLP 66
Query: 61 ILTGIVN 67
+L + N
Sbjct: 67 LLARLAN 73
>gi|296447148|ref|ZP_06889079.1| DEAD/DEAH box helicase domain protein [Methylosinus trichosporium
OB3b]
gi|296255313|gb|EFH02409.1| DEAD/DEAH box helicase domain protein [Methylosinus trichosporium
OB3b]
Length = 447
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + E I+RAL Q+G+ PT IQ+ +PS LL +D++G A+TG+GKT AF +P
Sbjct: 1 MTKFADLGLAEVILRALAQEGYVAPTPIQAQAIPS-LLEGRDLLGIAQTGTGKTAAFALP 59
Query: 61 ILTGIVNKLENPTEE 75
IL ++++ P +
Sbjct: 60 ILHRLLDERRRPAPQ 74
>gi|322710764|gb|EFZ02338.1| ATP dependent RNA helicase, putative [Metarhizium anisopliae ARSEF
23]
Length = 794
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M +WV N+ ++ A+ + GF PT IQ +P ++A D++G A+TGSGKTLAFGIP
Sbjct: 212 MGDWVALNLSPNLVSAIAKLGFSKPTAIQEKSIPE-IIAGGDVIGKAQTGSGKTLAFGIP 270
Query: 61 IL 62
I+
Sbjct: 271 IV 272
>gi|322693567|gb|EFY85423.1| ATP-dependent RNA helicase MAK5 [Metarhizium acridum CQMa 102]
Length = 794
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M +WV N+ ++ A+ + GF PT IQ +P ++A D++G A+TGSGKTLAFGIP
Sbjct: 212 MGDWVALNLSPNLVSAIAKLGFSKPTAIQEKSIPE-IIAGGDVIGKAQTGSGKTLAFGIP 270
Query: 61 IL 62
I+
Sbjct: 271 IV 272
>gi|213406505|ref|XP_002174024.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
gi|212002071|gb|EEB07731.1| ATP-dependent RNA helicase mak5 [Schizosaccharomyces japonicus
yFS275]
Length = 695
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+++W + I+ L + GF PT IQ +V+P A+ A D++G AETGSGKTLAFGIP
Sbjct: 162 VSKWSNIPLSAAILGRLSKLGFSAPTHIQELVLPVAM-AGSDVIGKAETGSGKTLAFGIP 220
Query: 61 IL 62
IL
Sbjct: 221 IL 222
>gi|336452174|ref|ZP_08622606.1| DNA/RNA helicase, superfamily II [Idiomarina sp. A28L]
gi|336280990|gb|EGN74275.1| DNA/RNA helicase, superfamily II [Idiomarina sp. A28L]
Length = 580
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%), Gaps = 4/73 (5%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E+ F+ +PE I+RA+ + GF TPT IQ +P LLA+K+++G A+TG+GKT AF
Sbjct: 1 MSEFNTFSALELPEPILRAISELGFDTPTPIQQQAIP-GLLAKKNVLGEAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLE 70
G+P L I ++
Sbjct: 60 GLPALANIDTRVR 72
>gi|223590136|sp|A5DF03.2|PRP28_PICGU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|190345810|gb|EDK37756.2| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP T++ + Q G+K PT IQ +P+AL +D+VG AETGSGKTLAF IP
Sbjct: 149 LRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTAL-GHRDVVGIAETGSGKTLAFLIP 207
Query: 61 ILT 63
+L+
Sbjct: 208 LLS 210
>gi|146420455|ref|XP_001486183.1| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP T++ + Q G+K PT IQ +P+AL +D+VG AETGSGKTLAF IP
Sbjct: 149 LRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTAL-GHRDVVGIAETGSGKTLAFLIP 207
Query: 61 ILT 63
+L+
Sbjct: 208 LLS 210
>gi|154249323|ref|YP_001410148.1| DEAD/DEAH box helicase domain-containing protein
[Fervidobacterium nodosum Rt17-B1]
gi|154153259|gb|ABS60491.1| DEAD/DEAH box helicase domain protein [Fervidobacterium nodosum
Rt17-B1]
Length = 571
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
F + E I+ A+ +KG++ PT+IQ +V+P AL KD++ A+TG+GKT AFGIP+L I
Sbjct: 23 FGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLERI 81
>gi|388579536|gb|EIM19858.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 711
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 8 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
++P ++R+L++ TPT IQ + ++++ RKD++G AETGSGKTLA+G+PIL+ IV
Sbjct: 147 DLPSALLRSLHENSIVTPTPIQKESLKASMI-RKDVIGIAETGSGKTLAYGLPILSRIV 204
>gi|40018540|ref|NP_954550.1| ATP-dependent RNA helicase DDX24 [Rattus norvegicus]
gi|33638101|gb|AAQ24160.1| DEAD box polypeptide 24 [Rattus norvegicus]
gi|67677909|gb|AAH97262.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
gi|149025406|gb|EDL81773.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 [Rattus norvegicus]
Length = 851
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 47/210 (22%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV--NKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEED 118
++ ++ +K++ P + + AA GS +L + TE
Sbjct: 251 MIHSVLQWHKMKAPPIPSSAGVPPR-LGAAAHRGSPCKDGAKSGVLP---EEATIETEAQ 306
Query: 119 ENDSGL--------------------------------EEEAEEVLEELEEESANTTE-- 144
+DSG+ E+++++ E+L+EE A +
Sbjct: 307 PSDSGVQATAKAGASAASAQAGLFCDDDAGEGPSSLVEEKQSKDREEKLDEEQAGKLKQE 366
Query: 145 -------FVKKTRNKLYALILAPTRELAIQ 167
+ R L L+L PTRELA+Q
Sbjct: 367 LCDQIAVYKVHPRRPLLGLVLTPTRELAVQ 396
>gi|336122353|ref|YP_004577128.1| DEAD/DEAH box helicase domain-containing protein
[Methanothermococcus okinawensis IH1]
gi|334856874|gb|AEH07350.1| DEAD/DEAH box helicase domain protein [Methanothermococcus
okinawensis IH1]
Length = 535
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MAE+ + + E +I AL +KGF +PT IQ +P L DI+G A+TG+GKT AFGIP
Sbjct: 3 MAEFKELGLSENVINALEKKGFTSPTPIQKKAIPILLKGNLDIIGQAQTGTGKTAAFGIP 62
Query: 61 IL 62
++
Sbjct: 63 MI 64
>gi|351698834|gb|EHB01753.1| ATP-dependent RNA helicase DDX24 [Heterocephalus glaber]
Length = 989
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 62/212 (29%), Positives = 95/212 (44%), Gaps = 45/212 (21%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ R DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPKPVLRALSFLGFSAPTPIQALTLVPAIRDRLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIVN-KLENPTEEDEN---DSARKDIVGAAETGSGKTLAFGIPIL--TGIVNKLENP 114
++ ++ + + P N S AET S +L V + P
Sbjct: 251 MIHAVLQWQKKKPLPIPGNAGVPSGETQTEAGAETESPSKAGSESAVLPSEAGVETIALP 310
Query: 115 TEE-------------------DENDSG------LEEEA--------EEVLE-----ELE 136
++ D++D+G +EEE EE+L+ EL+
Sbjct: 311 SDSELKARAKTHASISDQSLLCDDDDAGEGPSSLIEEEPVPKQIEDEEEMLDGELTGELK 370
Query: 137 EE-SANTTEFVKKTRNKLYALILAPTRELAIQ 167
+E + + L L+L PTRELA+Q
Sbjct: 371 QELDDKIATYKTHPKRPLLGLVLTPTRELAVQ 402
>gi|409048568|gb|EKM58046.1| hypothetical protein PHACADRAFT_182435 [Phanerochaete carnosa
HHB-10118-sp]
Length = 763
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +F++ + R LY + F PT IQ+ +P A KD+VG AETGSGKTLA+G+PIL
Sbjct: 131 WHQFSLHPQLNRVLYAQRFLIPTPIQAKAIPIATKG-KDVVGIAETGSGKTLAYGLPILH 189
Query: 64 GIVN--KLENPTEE 75
I+ K+E P +
Sbjct: 190 YILTQAKVEPPAQR 203
>gi|156060651|ref|XP_001596248.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980]
gi|160409986|sp|A7EAY2.1|MAK5_SCLS1 RecName: Full=ATP-dependent RNA helicase mak5
gi|154699872|gb|EDN99610.1| hypothetical protein SS1G_02468 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 780
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
WV+ ++ + AL + GF PT IQS +P +LA D+VG A TGSGKTLAFGIPI+
Sbjct: 215 WVELDLSSNTLMALSKMGFSKPTPIQSEAIPE-VLAGHDVVGKASTGSGKTLAFGIPIV 272
>gi|392595723|gb|EIW85046.1| DEAD-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 465
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +++AL Q FK PT+IQS +PSALL R DI+G AETGSGKT AF +PIL
Sbjct: 24 DPLLKALDQVNFKQPTEIQSQALPSALLGR-DIIGVAETGSGKTAAFALPIL 74
>gi|373495826|ref|ZP_09586379.1| hypothetical protein HMPREF0402_00252 [Fusobacterium sp. 12_1B]
gi|371966955|gb|EHO84433.1| hypothetical protein HMPREF0402_00252 [Fusobacterium sp. 12_1B]
Length = 527
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ K + E I+AL +KG++ PT IQ++ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 4 LEEFKKLGLGEKTIKALSKKGYEKPTPIQALTIPALLDGEKDIIGQAQTGTGKTAAFSLP 63
Query: 61 IL 62
IL
Sbjct: 64 IL 65
>gi|78186470|ref|YP_374513.1| DEAD/DEAH box helicase-like protein [Chlorobium luteolum DSM 273]
gi|78166372|gb|ABB23470.1| ATP-dependent RNA helicase CsdA [Chlorobium luteolum DSM 273]
Length = 590
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ N+ E I+RAL + G++TPT IQ+ +P L R D++G A+TG+GKT AF +PIL+
Sbjct: 12 FTDLNLSEPIMRALKEVGYETPTPIQARTIPLMLEGR-DVLGQAQTGTGKTAAFALPILS 70
Query: 64 GIVNKLENP 72
GI L +P
Sbjct: 71 GIDLSLTDP 79
>gi|340759001|ref|ZP_08695578.1| ATP-dependent RNA helicase [Fusobacterium varium ATCC 27725]
gi|251835856|gb|EES64394.1| ATP-dependent RNA helicase [Fusobacterium varium ATCC 27725]
Length = 527
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ K + E I+AL +KG++ PT IQ++ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 4 LEEFKKLGLGEKTIKALSKKGYEKPTPIQALTIPALLDGEKDIIGQAQTGTGKTAAFSLP 63
Query: 61 IL 62
IL
Sbjct: 64 IL 65
>gi|170100044|ref|XP_001881240.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643919|gb|EDR08170.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 616
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W K+++ + RAL+ K F +PT IQ +P AL R D++G A+TGSGKTLA+G+P
Sbjct: 28 LPNWHKYSLHPQLSRALHAKSFLSPTPIQEAALPMALAGR-DVIGVAQTGSGKTLAYGLP 86
Query: 61 ILTGIVNK 68
IL I+++
Sbjct: 87 ILHHILSQ 94
>gi|338812713|ref|ZP_08624877.1| ATP-dependent RNA helicase [Acetonema longum DSM 6540]
gi|337275303|gb|EGO63776.1| ATP-dependent RNA helicase [Acetonema longum DSM 6540]
Length = 469
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M +++ I + IIRAL++ GF+ PT IQ +P L A +D++G A+TG+GKT AFGIP
Sbjct: 1 MDKFISLGISDRIIRALHEMGFEEPTPIQEQCIP-VLAAGRDLIGQAQTGTGKTAAFGIP 59
Query: 61 IL 62
++
Sbjct: 60 LI 61
>gi|404368270|ref|ZP_10973627.1| hypothetical protein FUAG_02434 [Fusobacterium ulcerans ATCC
49185]
gi|313690084|gb|EFS26919.1| hypothetical protein FUAG_02434 [Fusobacterium ulcerans ATCC
49185]
Length = 527
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ K + E I+AL +KG++ PT IQ++ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 4 LEEFKKLGLGEKTIKALSKKGYEKPTPIQALTIPALLDGEKDIIGQAQTGTGKTAAFSLP 63
Query: 61 IL 62
IL
Sbjct: 64 IL 65
>gi|358389222|gb|EHK26814.1| hypothetical protein TRIVIDRAFT_175608 [Trichoderma virens Gv29-8]
Length = 770
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ N+ + A+ + GF PT IQ +P +LA D++G A+TGSGKTLAFGIP
Sbjct: 202 MGAWVELNLSTRTVSAIAKLGFSKPTLIQQKTIPE-ILAGDDVIGKAQTGSGKTLAFGIP 260
Query: 61 IL 62
I+
Sbjct: 261 IV 262
>gi|365858292|ref|ZP_09398238.1| putative ATP-dependent RNA helicase RhlE [Acetobacteraceae
bacterium AT-5844]
gi|363714432|gb|EHL97942.1| putative ATP-dependent RNA helicase RhlE [Acetobacteraceae
bacterium AT-5844]
Length = 457
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + E I+RAL Q+G+ TPT IQ+ +P +LA +D++G A+TG+GKT AF +P
Sbjct: 1 MTDFAALGLAEPILRALAQEGYSTPTPIQAQAIPH-VLAGRDLLGIAQTGTGKTAAFALP 59
Query: 61 ILTGIVNK 68
+L + ++
Sbjct: 60 LLHHLADR 67
>gi|344300058|gb|EGW30398.1| hypothetical protein SPAPADRAFT_157367 [Spathaspora passalidarum
NRRL Y-27907]
Length = 578
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A W FN+ +++AL Q GF+ PT IQS +P AL ++DI+ A TGSGKT A+ IPI
Sbjct: 15 ASWDSFNLDPRLLQALDQLGFEKPTLIQSSSIPLALEEKRDIIAKASTGSGKTGAYCIPI 74
Query: 62 LTGIVNKLENPTEEDE 77
+ N L T+E E
Sbjct: 75 VN---NLLTRSTDEHE 87
>gi|402467624|gb|EJW02900.1| hypothetical protein EDEG_02724 [Edhazardia aedis USNM 41457]
Length = 403
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M EW K I + + L +KGF TPT +Q V+P +L +K ++ A TGSGKTLAF +P
Sbjct: 1 MNEWNKLKIVKLLSEILIEKGFSTPTNVQKEVIPH-VLQKKSVITLANTGSGKTLAFAVP 59
Query: 61 ILTGIV 66
IL I+
Sbjct: 60 ILNDII 65
>gi|134046209|ref|YP_001097694.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C5]
gi|132663834|gb|ABO35480.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C5]
Length = 541
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + I+ AL +KGF TPT IQ +P + ++DIVG A+TG+GKT AFGIP
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|159040018|ref|YP_001539271.1| DEAD/DEAH box helicase [Salinispora arenicola CNS-205]
gi|157918853|gb|ABW00281.1| DEAD/DEAH box helicase domain protein [Salinispora arenicola
CNS-205]
Length = 469
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ +P+ ++RAL ++G P +IQ MP AL R D++G +TGSGKTLAFG+P
Sbjct: 16 LVDFAALGLPQPLVRALARQGITAPFEIQRATMPDALAGR-DVLGRGQTGSGKTLAFGLP 74
Query: 61 ILTGIVN 67
+L + +
Sbjct: 75 LLARLAD 81
>gi|340514381|gb|EGR44644.1| predicted protein [Trichoderma reesei QM6a]
Length = 734
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
WV+ N+ ++ A+ + GF PT IQ +P +LA +D++G A+TGSGKTLAFGIPI+
Sbjct: 172 WVELNLSTRVVSAIAKLGFSKPTLIQQKTIPE-ILAGEDVIGKAQTGSGKTLAFGIPIV 229
>gi|32564046|ref|NP_871838.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
gi|351063670|emb|CCD71884.1| Protein F55F8.2, isoform b [Caenorhabditis elegans]
Length = 579
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 3/59 (5%)
Query: 22 FKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDS 80
F PT+IQS V+P+A+ R+D++GAAETGSGKTLAFGIP++ + LE+ + E +S
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARL---LESSDDSQETES 63
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 46/86 (53%), Gaps = 28/86 (32%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
R+D++GAAETGSGKTLAFGIP++ ++ E +DS E E
Sbjct: 26 RQDVLGAAETGSGKTLAFGIPLVARLL--------ESSDDSQETESTE------------ 65
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
V+ R ALI+APTREL IQ
Sbjct: 66 ----VRGPR----ALIVAPTRELVIQ 83
>gi|19112899|ref|NP_596107.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74582436|sp|O74393.1|MAK5_SCHPO RecName: Full=ATP-dependent RNA helicase mak5
gi|3560140|emb|CAA20727.1| ATP-dependent RNA helicase Mak5 (predicted) [Schizosaccharomyces
pombe]
Length = 648
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W F++ ++ +L + GF P IQS+V+P A + DI+G A+TGSGKTLAFGIP
Sbjct: 121 VSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGF-DIIGKADTGSGKTLAFGIP 179
Query: 61 ILTGIVNKLE 70
IL + ++
Sbjct: 180 ILEHCLRNVD 189
>gi|442608782|ref|ZP_21023524.1| Cold-shock DEAD-box protein A [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441749831|emb|CCQ09586.1| Cold-shock DEAD-box protein A [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 621
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDASVKQP 74
>gi|237832861|ref|XP_002365728.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
gi|211963392|gb|EEA98587.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii ME49]
Length = 954
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI----VNK 68
++RAL F PT IQ V+ +AL RKDIVGAAETGSGKTLA+G+PI+ + + +
Sbjct: 244 VLRALQDCRFFAPTPIQRSVLLAALRDRKDIVGAAETGSGKTLAYGVPIVCNLLAQALRR 303
Query: 69 LENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEA 128
E E K G G+ P + +DE + ++
Sbjct: 304 NEKEIEHKNKTKTLKKKRKMRVEGGGEAAGDAWP-----------SSSDDEQEPEEASDS 352
Query: 129 EEVLEELEEESANTTEFVKKTRNKL---YALILAPTRELAIQ 167
E E + + N T K K+ LI+ P+RELA+Q
Sbjct: 353 GEASSEAGKGAGNITGGPKSVGGKVDGPECLIVVPSRELALQ 394
>gi|223590058|sp|A5DDF4.2|PRP5_PICGU RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|190345338|gb|EDK37207.2| hypothetical protein PGUG_01305 [Meyerozyma guilliermondii ATCC
6260]
Length = 862
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 1 MAEWVKFNIPETIIRALYQK-GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ +W + +P +I+ L +K G+ TP+ IQS +P A+++ +DI+G A TGSGKTLAF I
Sbjct: 265 IQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALP-AIMSGRDIIGVANTGSGKTLAFVI 323
Query: 60 PILTGIVNK 68
P++ I+++
Sbjct: 324 PLIRHIMDQ 332
>gi|3850123|emb|CAA21924.1| dead box helicase [Candida albicans]
Length = 574
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 7/108 (6%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ +++A+ Q GF PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 16 WDSFNLDPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIVN 75
Query: 64 GIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKL 111
++ +D + + I+ S + F +LT NK+
Sbjct: 76 NLLT-------DDSSQGIKSIILVPTRELSNQVFQFVEKLLTFSTNKI 116
>gi|150403372|ref|YP_001330666.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C7]
gi|150034402|gb|ABR66515.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C7]
Length = 546
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + II+AL +KGF PT IQ +P + ++D+VG A+TG+GKT AFGIP
Sbjct: 1 MESFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|221061545|ref|XP_002262342.1| ATP-dependent RNA helicase [Plasmodium knowlesi strain H]
gi|193811492|emb|CAQ42220.1| ATP-dependent RNA helicase, putative [Plasmodium knowlesi strain H]
Length = 713
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/161 (32%), Positives = 76/161 (47%), Gaps = 27/161 (16%)
Query: 8 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
N E I+ L K FK PT IQ + P AL + KD++G AETGSGKTLAF +P L I+
Sbjct: 279 NFHEAIVNHLNAK-FKEPTAIQKVTWPIAL-SGKDLIGVAETGSGKTLAFALPGLMHILK 336
Query: 68 KLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEE 127
+ E E++ ++ +G E T+E N+S
Sbjct: 337 QRERQVEKENGWEQGQEGIG------------------------EKTTQEWTNESMQGAT 372
Query: 128 AEEVLEELEEESANTTE-FVKKTRNKLYALILAPTRELAIQ 167
+ V + E + + + +V + +Y LIL PTREL +Q
Sbjct: 373 QDAVQGDTEGATQRSGDRYVHQGDRTVYGLILLPTRELCMQ 413
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + N+P I+ + + G+K PT IQ +P L R DI+G AETGSGKTLAF +P
Sbjct: 359 LRKWSECNLPTAILDVIKELGYKDPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLLP 417
Query: 61 ILTGIVN--KLENPTEEDENDSA 81
+L I + K+E + D+ A
Sbjct: 418 LLVWITSLPKIERQEDADQGPYA 440
>gi|159904844|ref|YP_001548506.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis C6]
gi|159886337|gb|ABX01274.1| DEAD/DEAH box helicase domain protein [Methanococcus maripaludis
C6]
Length = 546
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + II+AL +KGF PT IQ +P + ++D+VG A+TG+GKT AFGIP
Sbjct: 1 MESFKNLGLSDEIIKALEKKGFTNPTPIQEQAIPILIEGKRDVVGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|146419343|ref|XP_001485634.1| hypothetical protein PGUG_01305 [Meyerozyma guilliermondii ATCC
6260]
Length = 862
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 1 MAEWVKFNIPETIIRALYQK-GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ +W + +P +I+ L +K G+ TP+ IQS +P A+++ +DI+G A TGSGKTLAF I
Sbjct: 265 IQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALP-AIMSGRDIIGVANTGSGKTLAFVI 323
Query: 60 PILTGIVNK 68
P++ I+++
Sbjct: 324 PLIRHIMDQ 332
>gi|390598971|gb|EIN08368.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 754
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 50/70 (71%), Gaps = 3/70 (4%)
Query: 1 MAEWVKF--NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 58
+ W K+ ++ ++RAL+ +GF +PT IQ+ V+P A R D+VG AETGSGKTLA+G
Sbjct: 126 LPAWHKYKDHVHPKLLRALHAQGFNSPTPIQAQVIPEAGTGR-DVVGIAETGSGKTLAYG 184
Query: 59 IPILTGIVNK 68
+P+LT ++ +
Sbjct: 185 LPVLTDLLTR 194
>gi|358395256|gb|EHK44643.1| hypothetical protein TRIATDRAFT_172944, partial [Trichoderma
atroviride IMI 206040]
Length = 785
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
WV+ N+ I+ A+ + GF PT IQ +P +LA +D++G A+TGSGKTLAFGIPI+
Sbjct: 223 WVELNLSTRILSAIAKLGFAKPTLIQEKTIPE-ILAGEDVIGKAQTGSGKTLAFGIPIV 280
>gi|396475407|ref|XP_003839779.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
gi|312216349|emb|CBX96300.1| similar to ATP-dependent RNA helicase MAK5 [Leptosphaeria maculans
JN3]
Length = 826
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + N+ E ++ AL + F+ PT+IQ+ +P ++A +D++G A TGSGKTLAFGIP
Sbjct: 248 VSAWEELNLSEQVLDALAKLNFQKPTEIQASTIPE-IMAGRDVIGKASTGSGKTLAFGIP 306
Query: 61 ILTGIVN 67
I+ ++
Sbjct: 307 IIESFLS 313
>gi|167752241|ref|ZP_02424368.1| hypothetical protein ALIPUT_00483 [Alistipes putredinis DSM
17216]
gi|167660482|gb|EDS04612.1| DEAD/DEAH box helicase [Alistipes putredinis DSM 17216]
Length = 650
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 47/72 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + I+ A+ +KGF+TP+ IQS+ +P L KDI+ A+TG+GKT AFG+P
Sbjct: 4 LEEFKALGLSDDILTAIAKKGFETPSAIQSLTIPHLLTTDKDIIAQAQTGTGKTAAFGLP 63
Query: 61 ILTGIVNKLENP 72
I+ + ++ P
Sbjct: 64 IIQMLTSRRNIP 75
>gi|448103033|ref|XP_004199934.1| Piso0_002489 [Millerozyma farinosa CBS 7064]
gi|359381356|emb|CCE81815.1| Piso0_002489 [Millerozyma farinosa CBS 7064]
Length = 572
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ +++A+ GF PT +QS +P AL ++DI+ A TGSGKT A+ IPIL
Sbjct: 17 WSSFNLDPRLVQAIDHVGFSNPTYVQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPILN 76
Query: 64 GI 65
+
Sbjct: 77 NL 78
>gi|311744584|ref|ZP_07718384.1| ATP-dependent RNA helicase RhlE, partial [Aeromicrobium marinum
DSM 15272]
gi|311312203|gb|EFQ82120.1| ATP-dependent RNA helicase RhlE [Aeromicrobium marinum DSM 15272]
Length = 413
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ F++P ++ AL + TPT IQ V+P AL A D++G A TGSGKTLAFG+P+L
Sbjct: 13 FSSFDLPRPVLSALASRQLDTPTPIQDAVIPDAL-AGHDVLGKARTGSGKTLAFGLPVL 70
>gi|68478403|ref|XP_716703.1| hypothetical protein CaO19.3393 [Candida albicans SC5314]
gi|68478522|ref|XP_716643.1| hypothetical protein CaO19.10896 [Candida albicans SC5314]
gi|74679968|sp|Q5A4P9.1|DBP9_CANAL RecName: Full=ATP-dependent RNA helicase DBP9
gi|46438316|gb|EAK97648.1| hypothetical protein CaO19.10896 [Candida albicans SC5314]
gi|46438381|gb|EAK97712.1| hypothetical protein CaO19.3393 [Candida albicans SC5314]
Length = 574
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ +++A+ Q GF PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 16 WDSFNLDPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIVN 75
Query: 64 GIV 66
++
Sbjct: 76 NLL 78
>gi|308810583|ref|XP_003082600.1| RNA Helicase (ISS) [Ostreococcus tauri]
gi|116061069|emb|CAL56457.1| RNA Helicase (ISS) [Ostreococcus tauri]
Length = 1211
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +F++ I+RA+ GF +PT IQ + A R DI+GAA+TGSGKTLAF +P
Sbjct: 268 ISAWFEFDLHPLILRAIQDCGFTSPTPIQRECLHPATKGRYDIIGAAQTGSGKTLAFALP 327
Query: 61 IL 62
IL
Sbjct: 328 IL 329
>gi|28211624|ref|NP_782568.1| ATP-dependent RNA helicase [Clostridium tetani E88]
gi|28204066|gb|AAO36505.1| ATP-dependent RNA helicase [Clostridium tetani E88]
Length = 524
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 48/68 (70%), Gaps = 4/68 (5%)
Query: 3 EWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
E +KFN + E I++A+ GF+TP+KIQ+ V+P +L D++G A+TG+GKTLAFG
Sbjct: 2 ENLKFNNLGLNEDILKAIEDMGFETPSKIQAEVIP-IVLQGFDVIGQAQTGTGKTLAFGA 60
Query: 60 PILTGIVN 67
P+L I N
Sbjct: 61 PVLNSISN 68
>gi|15828540|ref|NP_325900.1| ATP-dependent RNA helicase [Mycoplasma pulmonis UAB CTIP]
gi|14089482|emb|CAC13242.1| ATP-DEPENDENT RNA HELICASE [Mycoplasma pulmonis]
Length = 480
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 53/83 (63%), Gaps = 8/83 (9%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI I+++L + GF+ PTKIQ V+P A KDI+G A+TG+GKT AF IPIL
Sbjct: 2 RFTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEG-KDIIGQAQTGTGKTAAFAIPIL 60
Query: 63 TGI---VNKLEN----PTEEDEN 78
+ + +N++++ PT E N
Sbjct: 61 SNLDCSINRIQHLVIAPTRELAN 83
>gi|315126148|ref|YP_004068151.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas sp. SM9913]
gi|315014662|gb|ADT68000.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas sp. SM9913]
Length = 607
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|270358682|gb|ACZ81471.1| CNB00610 [Cryptococcus heveanensis]
Length = 974
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSAL-LARKDIVGAAETGSGKTLAFGIP 60
++W NI + +I++L Q+ FK+PT IQ +P AL +DI+G A TGSGKTLA+ IP
Sbjct: 29 SQWQALNISDDLIKSLLQRKFKSPTPIQRSSIPGALSTPPRDILGMARTGSGKTLAYLIP 88
Query: 61 ILTGI 65
+L I
Sbjct: 89 LLQRI 93
>gi|373858038|ref|ZP_09600777.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
gi|372452260|gb|EHP25732.1| DEAD/DEAH box helicase domain protein [Bacillus sp. 1NLA3E]
Length = 485
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ FN+ E + +AL Q GF+ P+ IQ+ +P AL + KDI+G A+TG+GKT AFG+P
Sbjct: 1 MTKFSDFNLSEALEKALSQMGFEEPSPIQAQAIPVAL-SGKDIIGQAQTGTGKTTAFGVP 59
Query: 61 IL 62
++
Sbjct: 60 LI 61
>gi|221488186|gb|EEE26400.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii GT1]
Length = 970
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 56/160 (35%), Positives = 79/160 (49%), Gaps = 14/160 (8%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKL--E 70
++RAL F PT IQ V+ +AL RKDIVGAAETGSGKTLA+G+PI+ ++ +
Sbjct: 244 VLRALQDCRFFAPTPIQRSVLLAALRDRKDIVGAAETGSGKTLAYGVPIVCNLLAQALRR 303
Query: 71 NPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEE 130
N E + + + G A G + ++ E ED +DSG E
Sbjct: 304 NEKEIEHKNKTKALKKKRKMRVEGGGEAAGDAWRSSSDDEQE---PEDASDSG------E 354
Query: 131 VLEELEEESANTTEFVKKTRNKL---YALILAPTRELAIQ 167
E + + N T K K+ LI+ P+RELA+Q
Sbjct: 355 ASSEAGKGAGNITGGPKSVGGKVDGPECLIVVPSRELALQ 394
>gi|77359936|ref|YP_339511.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas haloplanktis TAC125]
gi|76874847|emb|CAI86068.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas haloplanktis TAC125]
Length = 616
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|359442860|ref|ZP_09232716.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20429]
gi|392535246|ref|ZP_10282383.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas arctica A 37-1-2]
gi|358035220|dbj|GAA68965.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20429]
Length = 621
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|359439062|ref|ZP_09229042.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20311]
gi|358026296|dbj|GAA65291.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20311]
Length = 613
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|359446128|ref|ZP_09235830.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20439]
gi|358040058|dbj|GAA72079.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20439]
Length = 609
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|320581609|gb|EFW95829.1| Essential nucleolar protein, putative DEAD-box RNA helicase
[Ogataea parapolymorpha DL-1]
Length = 705
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW N+ + ++ L + GF+ PT+IQ +P A+ KD++G A TGSGKTLA+GIP
Sbjct: 157 LPEWSSLNLSASTLQGLQKLGFQKPTEIQKATIPLAVDG-KDVIGKAITGSGKTLAYGIP 215
Query: 61 IL-TGIVNKLEN 71
IL + NK E+
Sbjct: 216 ILEKALSNKQEH 227
>gi|406602502|emb|CCH45896.1| hypothetical protein BN7_5483 [Wickerhamomyces ciferrii]
Length = 579
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 46/75 (61%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F + +I+A+ Q GFK PT +QS +P AL ++DI+ A TGSGKT+A+ +P++ I+
Sbjct: 20 FKLDPRLIQAIKQLGFKNPTLVQSKAIPLALQEKRDIIAKASTGSGKTVAYSVPVVQSIL 79
Query: 67 NKLENPTEEDENDSA 81
N N D S+
Sbjct: 80 NAKANNNSSDHEISS 94
>gi|156391217|ref|XP_001635665.1| predicted protein [Nematostella vectensis]
gi|156222761|gb|EDO43602.1| predicted protein [Nematostella vectensis]
Length = 777
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + IP++I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 349 IRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFAIP 407
Query: 61 ILTGIVN--KLENPTEEDE 77
+L I+ K+E + D+
Sbjct: 408 LLVWIMGLPKIERDNDADQ 426
>gi|359434412|ref|ZP_09224677.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20652]
gi|357918920|dbj|GAA60926.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20652]
Length = 617
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|307104920|gb|EFN53171.1| hypothetical protein CHLNCDRAFT_15504, partial [Chlorella
variabilis]
Length = 57
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 39/47 (82%)
Query: 16 ALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
AL + GF+ PT +Q+ +P+A+ R+D++GAA+TGSGKTLAFG+PI+
Sbjct: 8 ALGRLGFEAPTHVQAECLPAAIRDRRDVIGAAQTGSGKTLAFGLPIM 54
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/23 (73%), Positives = 23/23 (100%)
Query: 82 RKDIVGAAETGSGKTLAFGIPIL 104
R+D++GAA+TGSGKTLAFG+PI+
Sbjct: 32 RRDVIGAAQTGSGKTLAFGLPIM 54
>gi|296533085|ref|ZP_06895723.1| ATP-dependent RNA helicase RhlE, partial [Roseomonas cervicalis
ATCC 49957]
gi|296266590|gb|EFH12577.1| ATP-dependent RNA helicase RhlE [Roseomonas cervicalis ATCC
49957]
Length = 389
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + E ++RAL Q+G+ TPT IQ+ +P +LA +D++G A+TG+GKT AF +P
Sbjct: 1 MTDFAALGLAEPLLRALTQEGYTTPTPIQAQAIPH-VLAGRDLLGIAQTGTGKTAAFALP 59
Query: 61 ILTGIVNK 68
+L + ++
Sbjct: 60 VLHHLADR 67
>gi|254578440|ref|XP_002495206.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
gi|238938096|emb|CAR26273.1| ZYRO0B05852p [Zygosaccharomyces rouxii]
Length = 751
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 1 MAEWVKFN-IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ EW K + T++ L Q+GF PT IQ V+P AL +DI+G A TGSGKTLA+GI
Sbjct: 183 LPEWQKIAPLSFTVLNGLSQQGFTKPTDIQKEVLPLAL-KNEDIMGKAATGSGKTLAYGI 241
Query: 60 PILTGIVN 67
P+L +V+
Sbjct: 242 PLLESLVH 249
>gi|317142764|ref|XP_001819080.2| ATP-dependent RNA helicase mak5 [Aspergillus oryzae RIB40]
gi|391863775|gb|EIT73074.1| RNA helicase [Aspergillus oryzae 3.042]
Length = 769
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + I+ + + F TPT +Q +P L R D++G A TGSGKTLAFGIP
Sbjct: 195 VSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKASTGSGKTLAFGIP 253
Query: 61 ILTGIVNKLENPTEED 76
IL + KL + T++D
Sbjct: 254 ILEYYLEKLRSKTQKD 269
>gi|238501664|ref|XP_002382066.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
gi|220692303|gb|EED48650.1| ATP dependent RNA helicase, putative [Aspergillus flavus NRRL3357]
Length = 769
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + I+ + + F TPT +Q +P L R D++G A TGSGKTLAFGIP
Sbjct: 195 VSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKASTGSGKTLAFGIP 253
Query: 61 ILTGIVNKLENPTEED 76
IL + KL + T++D
Sbjct: 254 ILEYYLEKLRSKTQKD 269
>gi|91207159|sp|Q2UMY7.1|MAK5_ASPOR RecName: Full=ATP-dependent RNA helicase mak5
gi|83766938|dbj|BAE57078.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 757
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + I+ + + F TPT +Q +P L R D++G A TGSGKTLAFGIP
Sbjct: 183 VSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKASTGSGKTLAFGIP 241
Query: 61 ILTGIVNKLENPTEED 76
IL + KL + T++D
Sbjct: 242 ILEYYLEKLRSKTQKD 257
>gi|359455684|ref|ZP_09244895.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20495]
gi|414072865|ref|ZP_11408780.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. Bsw20308]
gi|358047307|dbj|GAA81144.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20495]
gi|410804718|gb|EKS10768.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. Bsw20308]
Length = 614
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|119470813|ref|ZP_01613424.1| ATP-dependent RNA helicase, cold shock protein A [Alteromonadales
bacterium TW-7]
gi|392537098|ref|ZP_10284235.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas marina mano4]
gi|119446040|gb|EAW27319.1| ATP-dependent RNA helicase, cold shock protein A [Alteromonadales
bacterium TW-7]
Length = 600
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|359448782|ref|ZP_09238296.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20480]
gi|358045352|dbj|GAA74545.1| ATP-dependent RNA helicase DeaD [Pseudoalteromonas sp. BSi20480]
Length = 600
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNNIDPSVKQP 74
>gi|257068313|ref|YP_003154568.1| DNA/RNA helicase, superfamily II [Brachybacterium faecium DSM 4810]
gi|256559131|gb|ACU84978.1| DNA/RNA helicase, superfamily II [Brachybacterium faecium DSM 4810]
Length = 582
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F++ I+ AL KG TP IQS+ +P AL R DI+G A+TG+GKTL FGIP+L
Sbjct: 33 FADFDVRTDIVEALAAKGITTPFPIQSLTLPVALRGR-DIIGQAKTGTGKTLGFGIPLLQ 91
Query: 64 GIVNKLE-NPTE 74
V E NP +
Sbjct: 92 NSVAPGEPNPAD 103
>gi|411171721|gb|AFW16627.1| ATP-dependent RNA helicase [Bacillus sp. UEB-S]
Length = 479
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G++ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYREPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|386774462|ref|ZP_10096840.1| DNA/RNA helicase, superfamily II [Brachybacterium
paraconglomeratum LC44]
Length = 596
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F++ I++AL KG TP IQ++ +P AL R DI+G A+TG+GKTL FGIP+L
Sbjct: 20 FADFDVRADIVKALAAKGITTPFPIQALTLPVALRGR-DIIGQAKTGTGKTLGFGIPLLQ 78
Query: 64 GIVNKLE-NPTEE 75
V E NP +
Sbjct: 79 SSVAPGEPNPDDR 91
>gi|255727326|ref|XP_002548589.1| hypothetical protein CTRG_02886 [Candida tropicalis MYA-3404]
gi|240134513|gb|EER34068.1| hypothetical protein CTRG_02886 [Candida tropicalis MYA-3404]
Length = 605
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ +++A+ Q GF PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 52 WDSFNLDPRLLQAIDQLGFANPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYSIPIVN 111
Query: 64 GIV 66
++
Sbjct: 112 NLL 114
>gi|257126351|ref|YP_003164465.1| DEAD/DEAH box helicase [Leptotrichia buccalis C-1013-b]
gi|257050290|gb|ACV39474.1| DEAD/DEAH box helicase domain protein [Leptotrichia buccalis
C-1013-b]
Length = 571
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F + ++ AL +KGF+ P++IQ +V+P L R ++G A+TG+GKT AFGIP
Sbjct: 1 MQRFEDFGLSTEMLNALSKKGFEEPSEIQKLVVPELLKERTHLIGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|384177569|ref|YP_005558954.1| ATP-dependent RNA helicase DbpA [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
gi|349596793|gb|AEP92980.1| ATP-dependent RNA helicase DbpA [Bacillus subtilis subsp.
subtilis str. RO-NN-1]
Length = 479
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G++ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYREPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|392556455|ref|ZP_10303592.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas undina NCIMB 2128]
Length = 609
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F N+ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLNLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++ P
Sbjct: 60 ALPLLNDIDPSVKQP 74
>gi|241956492|ref|XP_002420966.1| ATP-dependent RNA helicase, putative; ribosome biogenesis
protein, putative [Candida dubliniensis CD36]
gi|223644309|emb|CAX41122.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 570
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ +++A+ Q GF PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 16 WDSFNLDPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIVN 75
Query: 64 GIV 66
++
Sbjct: 76 NLL 78
>gi|406859182|gb|EKD12251.1| DEAD/DEAH box helicase [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 762
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + ++ + AL + GF+ PT IQS +P ++A D+VG A TGSGKTLAFGIP
Sbjct: 196 VSAWTELDLSPDTLSALSKLGFQKPTLIQSSAIPE-IMAGHDVVGKASTGSGKTLAFGIP 254
Query: 61 ILTGIVNKLENPTEEDENDSAR 82
IL + +EDE ++R
Sbjct: 255 ILESWIETY-GQLDEDELKASR 275
>gi|258653503|ref|YP_003202659.1| DEAD/DEAH box helicase [Nakamurella multipartita DSM 44233]
gi|258556728|gb|ACV79670.1| DEAD/DEAH box helicase domain protein [Nakamurella multipartita
DSM 44233]
Length = 607
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ +P T++RA+ GF TPT IQ+ +P ALLA +DI G A+TG+GKT AFG+P+L I
Sbjct: 31 ELGLPGTLLRAVKDLGFATPTAIQAAAIP-ALLAGRDITGVAQTGTGKTAAFGLPLLAAI 89
>gi|397573945|gb|EJK48944.1| hypothetical protein THAOC_32221 [Thalassiosira oceanica]
Length = 980
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 44/58 (75%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
ET+ R L+ + PT IQ+ +P+A+L R+DIVGAA TGSGKTL++G+PIL ++++
Sbjct: 256 ETLSRGLHSLKYSYPTPIQASTLPAAILGRRDIVGAAPTGSGKTLSYGLPILQYLLDE 313
>gi|395760255|ref|ZP_10440924.1| cold-shock DeaD box ATP-dependent RNA helicase (partial match)
[Janthinobacterium lividum PAMC 25724]
Length = 716
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
N+ E +IRAL G++TP+ IQ+ +P LLA +D++G A+TG+GKT AF +PIL+ I
Sbjct: 12 LNLSEPLIRALKDVGYETPSPIQAATIP-LLLANRDVLGQAQTGTGKTAAFALPILSRID 70
Query: 67 NKLENP 72
K +P
Sbjct: 71 LKQSSP 76
>gi|260889521|ref|ZP_05900784.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Leptotrichia
hofstadii F0254]
gi|260860932|gb|EEX75432.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Leptotrichia
hofstadii F0254]
Length = 290
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F + ++ AL +KGF+ P++IQ +V+P L R ++G A+TG+GKT AFGIP
Sbjct: 1 MQRFEDFGLSTEMLNALSKKGFEEPSEIQKLVVPELLKERTHLIGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|407775962|ref|ZP_11123253.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Thalassospira profundimaris WP0211]
gi|407281034|gb|EKF06599.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Thalassospira profundimaris WP0211]
Length = 605
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + + E ++RAL Q+G+ PT IQ+ +PS LL KD++G A+TG+GKT AF +P
Sbjct: 1 MTQFSELGLAEPVLRALAQEGYDAPTPIQAQSIPS-LLDGKDLLGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|355683260|gb|AER97066.1| DEAD box polypeptide 24 [Mustela putorius furo]
Length = 702
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP++
Sbjct: 58 WKDLFVPKPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIPMIH 117
Query: 64 GIV 66
++
Sbjct: 118 AVL 120
>gi|304315659|ref|YP_003850804.1| DEAD/DEAH box helicase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777161|gb|ADL67720.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 514
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + N+ E I++A+ GF+ P+KIQS V+P LL D++G AETG+GKTLA+G PI+
Sbjct: 2 DFKELNLNEKILKAIDDMGFEEPSKIQSEVIP-VLLQGSDVIGQAETGTGKTLAYGAPII 60
Query: 63 TGI 65
I
Sbjct: 61 NNI 63
>gi|146423163|ref|XP_001487513.1| hypothetical protein PGUG_00890 [Meyerozyma guilliermondii ATCC
6260]
Length = 586
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A+W F + +++A+YQ GF+ PT IQS +P +L ++DI+ A TGSGKT A+ IPI
Sbjct: 35 AKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPI 94
Query: 62 LTGIVNK 68
+ I+++
Sbjct: 95 IQNILSE 101
>gi|224538852|ref|ZP_03679391.1| hypothetical protein BACCELL_03748 [Bacteroides cellulosilyticus
DSM 14838]
gi|224519527|gb|EEF88632.1| hypothetical protein BACCELL_03748 [Bacteroides cellulosilyticus
DSM 14838]
Length = 478
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + NI E + RAL +K + TPT IQ +P AL R D++G A+TG+GKT AF IP
Sbjct: 1 MMTFKQMNISEPVCRALLEKNYSTPTLIQEQAIPEALTGR-DLLGLAQTGTGKTAAFAIP 59
Query: 61 IL 62
I+
Sbjct: 60 II 61
>gi|223590194|sp|A5DC85.2|DBP9_PICGU RecName: Full=ATP-dependent RNA helicase DBP9
gi|190344991|gb|EDK36792.2| hypothetical protein PGUG_00890 [Meyerozyma guilliermondii ATCC
6260]
Length = 586
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A+W F + +++A+YQ GF+ PT IQS +P +L ++DI+ A TGSGKT A+ IPI
Sbjct: 35 AKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPI 94
Query: 62 LTGIVNK 68
+ I+++
Sbjct: 95 IQNILSE 101
>gi|440784133|ref|ZP_20961554.1| ATP-dependent RNA helicase [Clostridium pasteurianum DSM 525]
gi|440219169|gb|ELP58384.1| ATP-dependent RNA helicase [Clostridium pasteurianum DSM 525]
Length = 479
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + KFNI + I+ +L + G+K PT++Q V+P +L KDI+ +ETGSGKT +FGIP
Sbjct: 1 MENFCKFNISKRILLSLEKLGYKNPTEVQKEVIP-LVLKNKDIIVQSETGSGKTASFGIP 59
Query: 61 ILTGI 65
I I
Sbjct: 60 ICEKI 64
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ + I+ AL ++G+ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 369 WVQCGVSMKILSALKKQGYDKPTPIQAQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 427
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 428 HIMD--QRPLEESE 439
>gi|407789204|ref|ZP_11136306.1| ATP-dependent RNA helicase DeaD [Gallaecimonas xiamenensis 3-C-1]
gi|407207182|gb|EKE77125.1| ATP-dependent RNA helicase DeaD [Gallaecimonas xiamenensis 3-C-1]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + + ++P+ I++AL GF TP+ IQ+ +P LL +D++G A+TG+GKT AFG+P+
Sbjct: 3 ATFTELSLPQPIMQALDDLGFVTPSPIQASCIP-LLLEGRDVLGIAQTGTGKTAAFGLPL 61
Query: 62 LTGI 65
L GI
Sbjct: 62 LAGI 65
>gi|221508698|gb|EEE34267.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 848
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 18/162 (11%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI----VNK 68
++RAL F PT IQ V+ +AL RKDIVGAAETGSGKTLA+G+PI+ + + +
Sbjct: 244 VLRALQDCRFFAPTPIQRSVLLAALRDRKDIVGAAETGSGKTLAYGVPIVCNLLAQALRR 303
Query: 69 LENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEA 128
E E A K G G+ + +DE + ++
Sbjct: 304 NEKEIEHKNKTKALKKKRKMRVEGGGEA-----------AGDAWRSSSDDEQEPEEASDS 352
Query: 129 EEVLEELEEESANTTEFVKKTRNKL---YALILAPTRELAIQ 167
E E + + N T K K+ LI+ P+RELA+Q
Sbjct: 353 GEASSEAGKGAGNITGGPKSVGGKVDGPECLIVVPSRELALQ 394
>gi|340623645|ref|YP_004742098.1| DEAD/DEAH box helicase [Methanococcus maripaludis X1]
gi|339903913|gb|AEK19355.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis X1]
Length = 538
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + I+ AL +KGF PT IQ +P + ++DIVG A+TG+GKT AFGIP
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|313234298|emb|CBY10365.1| unnamed protein product [Oikopleura dioica]
Length = 408
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + IPE I++ + G+K PT IQ +P + R DI+G AETGSGKTLAF +P
Sbjct: 1 MRYWKESIIPENILKIISDAGYKDPTPIQRQAIPIGMQNR-DIIGVAETGSGKTLAFLVP 59
Query: 61 ILTGIVNKLENPTEEDEN 78
+L I + N ED +
Sbjct: 60 LLVWIDSLPRNIRVEDAD 77
>gi|88857246|ref|ZP_01131889.1| RNA helicase DeaD [Pseudoalteromonas tunicata D2]
gi|88820443|gb|EAR30255.1| RNA helicase DeaD [Pseudoalteromonas tunicata D2]
Length = 624
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ N+ +++A+ + G+ TPT IQS +PS LLA KD++G A+TG+GKT AFG+P+L+ +
Sbjct: 11 QLNLLAPVLQAINEMGYITPTPIQSQAIPS-LLAGKDVLGEAQTGTGKTAAFGLPLLSRL 69
Query: 66 VNKLENP 72
L+ P
Sbjct: 70 DADLKQP 76
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ + I+ AL + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 363 WVQCGVSMKILNALKKHGYEKPTPIQAQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 421
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 422 HIMD--QRPLEESE 433
>gi|302673650|ref|XP_003026511.1| hypothetical protein SCHCODRAFT_62132 [Schizophyllum commune
H4-8]
gi|300100194|gb|EFI91608.1| hypothetical protein SCHCODRAFT_62132 [Schizophyllum commune
H4-8]
Length = 437
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ + + +P+ I ++ KGFK PT IQ+ P AL R D+VG AETGSGKTLAFGIP
Sbjct: 7 VVSFAQLAVPDEIRKSF--KGFKEPTPIQACTWPPALEGR-DVVGIAETGSGKTLAFGIP 63
Query: 61 ILTGIVNKLENPTEE 75
+L ++ T+
Sbjct: 64 LLNRLITSRSTTTQS 78
>gi|169837346|ref|ZP_02870534.1| ATP-dependent RNA helicase [candidate division TM7 single-cell
isolate TM7a]
Length = 477
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ F + ++ AL +KGF+ P++IQ +V+P L R ++G A+TG+GKT AFGIP
Sbjct: 1 MQKFEDFGLSIEMLNALSKKGFEEPSEIQKLVIPELLKERTHLIGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|170088270|ref|XP_001875358.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650558|gb|EDR14799.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 691
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP+ I+ + Q G+K P+ IQ +P LL R DI+G AETGSGKT AF IP
Sbjct: 263 LRSWTESAIPQPILDCIEQIGYKDPSPIQRQAIPIGLLNR-DIIGIAETGSGKTAAFVIP 321
Query: 61 ILTGI 65
+L+ I
Sbjct: 322 MLSFI 326
>gi|45358020|ref|NP_987577.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
maripaludis S2]
gi|44920777|emb|CAF30013.1| Probable ATP dependent RNA helicase [Methanococcus maripaludis
S2]
Length = 538
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + I+ AL +KGF PT IQ +P + ++DIVG A+TG+GKT AFGIP
Sbjct: 1 MESFKNLGLSDEILEALEKKGFTNPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILETI 65
>gi|403416563|emb|CCM03263.1| predicted protein [Fibroporia radiculosa]
Length = 669
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARK--DIVGAAETGSGKTLAFG 58
+ W F++ + RALY + F +PT IQ+ +P LARK DIVG AETGSGKTLA+G
Sbjct: 128 LPRWSPFSLHPQLGRALYAQHFSSPTPIQAEALP---LARKGRDIVGVAETGSGKTLAYG 184
Query: 59 IPILTGIVNKLENPTEEDENDSARKDIV 86
+PIL ++ +P E S R I+
Sbjct: 185 LPILHHLLAH-ASPAESKTRRSVRALIL 211
>gi|423222165|ref|ZP_17208635.1| hypothetical protein HMPREF1062_00821 [Bacteroides
cellulosilyticus CL02T12C19]
gi|392643389|gb|EIY37140.1| hypothetical protein HMPREF1062_00821 [Bacteroides
cellulosilyticus CL02T12C19]
Length = 477
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + NI E + RAL +K + TPT IQ +P AL R D++G A+TG+GKT AF IPI+
Sbjct: 3 FKQMNISEPVCRALLEKNYSTPTLIQEQAIPEALTGR-DLLGLAQTGTGKTAAFAIPIIE 61
Query: 64 GIVNKLENPTEEDE 77
+ L +PT + +
Sbjct: 62 QL---LADPTSQQK 72
>gi|242278297|ref|YP_002990426.1| DEAD/DEAH box helicase [Desulfovibrio salexigens DSM 2638]
gi|242121191|gb|ACS78887.1| DEAD/DEAH box helicase domain protein [Desulfovibrio salexigens
DSM 2638]
Length = 521
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + + II AL +KGF PT IQ +P L KDIVG A+TG+GKT AFG+P
Sbjct: 1 MEKFRNLGLSDAIIEALEKKGFTAPTPIQEKTIPMLLSGEKDIVGQAQTGTGKTAAFGLP 60
Query: 61 ILTGI 65
I+ +
Sbjct: 61 IIENV 65
>gi|374287228|ref|YP_005034313.1| putative RNA helicase dead-box protein [Bacteriovorax marinus SJ]
gi|301165769|emb|CBW25341.1| putative RNA helicase dead-box protein [Bacteriovorax marinus SJ]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE+++RAL KG+K+PT IQ +P L D VG A+TG+GKT AF +P+L
Sbjct: 3 FSDLTLPESLLRALEDKGYKSPTDIQEKAIPLLLEKDTDFVGQAQTGTGKTAAFSLPLLA 62
Query: 64 GIVNK 68
I +K
Sbjct: 63 KIDSK 67
>gi|318081433|ref|ZP_07988765.1| ATP-dependent RNA helicase [Streptomyces sp. SA3_actF]
Length = 488
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE I+R L Q G +P IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 53 FAELGLPENIVRKLTQNGVTSPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLLA 111
Query: 64 GI 65
+
Sbjct: 112 SL 113
>gi|392307937|ref|ZP_10270471.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas citrea NCIMB 1889]
Length = 609
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 4/68 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F ++ I++A+ ++G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFKSLDLSPAILKAVEEQGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGI 65
+P+L I
Sbjct: 60 ALPLLNNI 67
>gi|297584103|ref|YP_003699883.1| DEAD/DEAH box helicase domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297142560|gb|ADH99317.1| DEAD/DEAH box helicase domain protein [Bacillus selenitireducens
MLS10]
Length = 528
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + +FNI ++++RA+ + GF+ P+ IQ V+P+ +L D++G A+TG+GKT AFGIP
Sbjct: 1 MMTFEEFNISKSLMRAIKEMGFEAPSPIQEKVIPT-ILEGNDLIGQAQTGTGKTAAFGIP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|401885525|gb|EJT49639.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
2479]
gi|406694842|gb|EKC98161.1| ATP-dependent RNA helicase [Trichosporon asahii var. asahii CBS
8904]
Length = 804
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ N+ ++RAL GF PT IQS +P ALL R DI+G+A TGSGKT AF IPIL
Sbjct: 210 FASMNLSRPLLRALSSLGFNAPTPIQSRAVPLALLGR-DILGSAVTGSGKTAAFMIPIL 267
>gi|297565173|ref|YP_003684145.1| DEAD/DEAH box helicase [Meiothermus silvanus DSM 9946]
gi|296849622|gb|ADH62637.1| DEAD/DEAH box helicase domain protein [Meiothermus silvanus DSM
9946]
Length = 538
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
E+ F + ++ AL KGF TPT IQ+ +P AL R D++G A TG+GKTLAF +P
Sbjct: 2 EFKDFALRPEVLAALEAKGFTTPTAIQAQAIPLALEGR-DVLGQARTGTGKTLAFALP-- 58
Query: 63 TGIVNKLENPTEEDENDSARK 83
I +KLE P D ++R+
Sbjct: 59 --IAHKLEAPFRGDSRVASRQ 77
>gi|353235877|emb|CCA67883.1| related to MAK5-ATP-dependent RNA helicase [Piriformospora indica
DSM 11827]
Length = 703
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW + T++R + +GF PT IQ +P + R D++G A+TGSGKTLAF +P
Sbjct: 124 LPEWSNLGLSPTLLRRIKDQGFIKPTPIQRETLPLSTSGR-DVIGIAQTGSGKTLAFALP 182
Query: 61 ILTGIV--NKLENPTEEDEN 78
IL I+ N+L++ + N
Sbjct: 183 ILRHILSTNRLKSLRRQKRN 202
>gi|154314076|ref|XP_001556363.1| hypothetical protein BC1G_04981 [Botryotinia fuckeliana B05.10]
Length = 490
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + ++ + AL + GF PT IQS +P +LA D+VG A TGSGKTLAFGIP
Sbjct: 206 VSSWEELDLSSNTLSALSKMGFSKPTPIQSEAIPE-VLAGHDVVGKASTGSGKTLAFGIP 264
Query: 61 IL 62
I+
Sbjct: 265 IV 266
>gi|117924939|ref|YP_865556.1| DEAD/DEAH box helicase [Magnetococcus marinus MC-1]
gi|117608695|gb|ABK44150.1| DEAD/DEAH box helicase domain protein [Magnetococcus marinus
MC-1]
Length = 439
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+++ N+ + ++ AL Q G+ TPT IQ+ +P LLA +D++G A+TG+GKT AF +P
Sbjct: 1 MSDFASLNLVKPLLNALTQAGYTTPTPIQAQAIPH-LLAGRDLLGIAQTGTGKTAAFALP 59
Query: 61 ILTGIVNKLEN 71
IL NKL
Sbjct: 60 IL----NKLSQ 66
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ + I+ AL + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 364 WVQCGVSMKILSALKKHGYEKPTPIQAQAIP-AVMSGRDLIGIAKTGSGKTIAFLLPMFR 422
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 423 HIMD--QRPLEESE 434
>gi|19113831|ref|NP_592919.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1175401|sp|Q09719.1|DBP10_SCHPO RecName: Full=ATP-dependent RNA helicase dbp10
gi|914885|emb|CAA90465.1| ATP-dependent RNA helicase Dbp10 (predicted) [Schizosaccharomyces
pombe]
Length = 848
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 70
+T++RA+++KGFK PT IQ +P LL +D+VG A TGSGKT AF IP++ + + L
Sbjct: 78 QTLLRAIFKKGFKAPTPIQRKTIP-LLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLA 136
Query: 71 N 71
N
Sbjct: 137 N 137
>gi|262038442|ref|ZP_06011816.1| ATP-dependent RNA helicase DbpA [Leptotrichia goodfellowii F0264]
gi|261747537|gb|EEY35002.1| ATP-dependent RNA helicase DbpA [Leptotrichia goodfellowii F0264]
Length = 98
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + + ++ AL +KGF+ P+ IQ +V+P L R ++G A+TG+GKT AFGIP
Sbjct: 1 MQRFEDYGLSQEVLNALEKKGFEEPSDIQKLVIPELLKERTHLIGQAQTGTGKTAAFGIP 60
Query: 61 IL 62
IL
Sbjct: 61 IL 62
>gi|451996154|gb|EMD88621.1| hypothetical protein COCHEDRAFT_1181781 [Cochliobolus
heterostrophus C5]
Length = 742
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W K ++ E ++ AL + F PT IQ+ +P ++A +D++G A TGSGKTLAFGIP
Sbjct: 170 VSAWAKLDLSEEMLGALAKLKFSEPTDIQASTIPE-IIAGRDVIGKASTGSGKTLAFGIP 228
Query: 61 ILTGIVNK 68
I+ + +
Sbjct: 229 IIESYLTR 236
>gi|347831310|emb|CCD47007.1| hypothetical protein [Botryotinia fuckeliana]
Length = 774
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + ++ + AL + GF PT IQS +P +LA D+VG A TGSGKTLAFGIP
Sbjct: 206 VSSWEELDLSSNTLSALSKMGFSKPTPIQSEAIPE-VLAGHDVVGKASTGSGKTLAFGIP 264
Query: 61 IL 62
I+
Sbjct: 265 IV 266
>gi|154418331|ref|XP_001582184.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
gi|121916417|gb|EAY21198.1| DEAD/DEAH box helicase family protein [Trichomonas vaginalis G3]
Length = 640
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W +P ++ L +GFK PT IQ +P +L+ +DI+G A TGSGKTLAF IP
Sbjct: 100 IVNWTDCGLPAPLMSHLRLRGFKQPTSIQCQAIP-CILSGRDIIGCAVTGSGKTLAFIIP 158
Query: 61 ILTGIV 66
L ++
Sbjct: 159 CLLHVL 164
>gi|350286853|gb|EGZ68100.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 777
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EWV ++ +I ++ + F PT IQS +P ++A D++G A TGSGKTLAFGIP
Sbjct: 205 MSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPE-IMAGHDVIGKASTGSGKTLAFGIP 263
Query: 61 ILTGIVNKLENPTEEDE 77
++ ++ E + E
Sbjct: 264 VIESWLSAAETRKQNKE 280
>gi|336466285|gb|EGO54450.1| hypothetical protein NEUTE1DRAFT_87798 [Neurospora tetrasperma FGSC
2508]
Length = 808
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EWV ++ +I ++ + F PT IQS +P ++A D++G A TGSGKTLAFGIP
Sbjct: 205 MSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPE-IMAGHDVIGKASTGSGKTLAFGIP 263
Query: 61 IL 62
++
Sbjct: 264 VI 265
>gi|443288243|ref|ZP_21027337.1| Putative ATP-dependent RNA helicase (DEAD/DEAH box)
[Micromonospora lupini str. Lupac 08]
gi|385888773|emb|CCH15411.1| Putative ATP-dependent RNA helicase (DEAD/DEAH box)
[Micromonospora lupini str. Lupac 08]
Length = 653
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ +PE ++RAL Q+G +P +IQ +P AL R D++G +TGSGKTLAFG+P++
Sbjct: 32 DFAGLGLPEPLVRALAQQGITSPFEIQRATVPDALAGR-DVLGRGQTGSGKTLAFGLPMI 90
Query: 63 TGIVNK 68
+ N+
Sbjct: 91 ARLANR 96
>gi|347536498|ref|YP_004843923.1| putative ATP-dependent RNA helicase [Flavobacterium
branchiophilum FL-15]
gi|345529656|emb|CCB69686.1| Probable ATP-dependent RNA helicase, DEAD/DEAH box family
[Flavobacterium branchiophilum FL-15]
Length = 432
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ ++ + + L TPT+IQ V+P L A+ D+VG A TG GKT+AFG+P
Sbjct: 1 MSNFIDLGLTNAFVETLKSLNINTPTEIQQQVIPQILQAQHDVVGIAHTGHGKTVAFGVP 60
Query: 61 ILTGIVNKLENP 72
IL I ++NP
Sbjct: 61 ILQQI--DVQNP 70
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 81 ARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
A+ D+VG A TG GKT+AFG+PIL I ++NP + + E +++ +L++
Sbjct: 39 AQHDVVGIAHTGHGKTVAFGVPILQQI--DVQNPHVQAVILAPTRELGQQITHQLQQ 93
>gi|85086234|ref|XP_957656.1| hypothetical protein NCU04041 [Neurospora crassa OR74A]
gi|74662508|sp|Q7RZH4.1|MAK5_NEUCR RecName: Full=ATP-dependent RNA helicase mak-5
gi|28918750|gb|EAA28420.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|39979232|emb|CAE85602.1| related to ATP-dependent RNA helicase [Neurospora crassa]
Length = 805
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EWV ++ +I ++ + F PT IQS +P ++A D++G A TGSGKTLAFGIP
Sbjct: 208 MSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPE-IMAGHDVIGKASTGSGKTLAFGIP 266
Query: 61 IL 62
++
Sbjct: 267 VI 268
>gi|392573357|gb|EIW66497.1| hypothetical protein TREMEDRAFT_65359 [Tremella mesenterica DSM
1558]
Length = 744
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + + R+L + GF PT IQ+ +P LA +D+VG AETGSGKTLA+ +P
Sbjct: 152 LPQWSSIPLHPILKRSLSKLGFTKPTDIQARALP-VCLAGRDVVGVAETGSGKTLAYALP 210
Query: 61 ILTGIVNKLENP 72
IL+ + L NP
Sbjct: 211 ILSYL---LRNP 219
>gi|218132094|ref|ZP_03460898.1| hypothetical protein BACEGG_03721 [Bacteroides eggerthii DSM
20697]
gi|217985744|gb|EEC52085.1| DEAD/DEAH box helicase [Bacteroides eggerthii DSM 20697]
Length = 392
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI E+I++A+ +KG+ PT IQ+ +P ALL KDI+G A+TG+GKT AF IPI+
Sbjct: 26 LNITESILKAIEEKGYVNPTPIQAKAIP-ALLVGKDILGCAQTGTGKTAAFAIPII 80
>gi|443899361|dbj|GAC76692.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 563
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 63/119 (52%), Gaps = 15/119 (12%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV-- 66
I + + L +GF TPT IQ+ P LL KD+VG AETGSGKT AFG+P L +V
Sbjct: 143 IDAAVKKTLDAQGFTTPTPIQACCWP-VLLQNKDVVGIAETGSGKTFAFGLPALQHLVTK 201
Query: 67 NKLENPTEEDENDSARKDIVGAAETGS------------GKTLAFGIPILTGIVNKLEN 113
+K+ + + + + A+ +++ A T GK++ G+ L G V+K E
Sbjct: 202 HKVLDGSSKKKAKGAQVNVLVVAPTRELAIQTEENMAKLGKSMGIGMICLYGGVSKQEQ 260
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 26/85 (30%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD+VG AETGSGKT AFG+P L +V K +VL+ ++ A
Sbjct: 174 KDVVGIAETGSGKTFAFGLPALQHLVTK------------------HKVLDGSSKKKAKG 215
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
+ + L++APTRELAIQ
Sbjct: 216 AQ--------VNVLVVAPTRELAIQ 232
>gi|317477122|ref|ZP_07936363.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
gi|316906665|gb|EFV28378.1| DEAD/DEAH box helicase [Bacteroides eggerthii 1_2_48FAA]
Length = 392
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI E+I++A+ +KG+ PT IQ+ +P ALL KDI+G A+TG+GKT AF IPI+
Sbjct: 26 LNITESILKAIEEKGYVNPTPIQAKAIP-ALLVGKDILGCAQTGTGKTAAFAIPII 80
>gi|299470469|emb|CBN78461.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1012
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + ++P +++ A+ + G++ P+ IQ +P + R+DI+G AETGSGKT AFGIP++
Sbjct: 578 WEEGHLPSSVMEAIRELGYEKPSPIQRQAIPIGM-ERRDIIGIAETGSGKTAAFGIPMIA 636
Query: 64 GIVN 67
I++
Sbjct: 637 YILS 640
>gi|312375100|gb|EFR22532.1| hypothetical protein AND_15065 [Anopheles darlingi]
Length = 821
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W++ P+ I+ + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+LT
Sbjct: 395 WIESGFPKEILEIIDKVGYKDPTPIQRQAIPIGLQNR-DIIGIAETGSGKTLAFLIPLLT 453
Query: 64 GI 65
I
Sbjct: 454 WI 455
>gi|291001145|ref|XP_002683139.1| predicted protein [Naegleria gruberi]
gi|284096768|gb|EFC50395.1| predicted protein [Naegleria gruberi]
Length = 460
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 17 LYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLEN-PTEE 75
LY+ GF PT IQ +P A+ + DI+ AAETGSGKTLAF +PI+ ++ EN P ++
Sbjct: 1 LYRLGFYKPTPIQEESIPKAIGQQADILAAAETGSGKTLAFVLPIIDELMKLKENEPAQQ 60
Query: 76 DENDSARKDI 85
++D +R D+
Sbjct: 61 VKDDESRTDM 70
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 22/84 (26%)
Query: 84 DIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTT 143
DI+ AAETGSGKTLAF +PI+ ++ EN E A++V +++ + T
Sbjct: 26 DILAAAETGSGKTLAFVLPIIDELMKLKEN------------EPAQQV----KDDESRTD 69
Query: 144 EFVKKTRNKLYALILAPTRELAIQ 167
F +L +LIL PTRELA+Q
Sbjct: 70 MF------QLRSLILLPTRELALQ 87
>gi|342886208|gb|EGU86105.1| hypothetical protein FOXB_03374 [Fusarium oxysporum Fo5176]
Length = 774
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA WV N+ I+ A+ + F PT IQ +P +LA D++G A+TGSGKTLAFGIP
Sbjct: 201 MAAWVPLNLSPQILSAIAKLKFTKPTLIQEKTIPE-ILAGDDVIGKAQTGSGKTLAFGIP 259
Query: 61 IL 62
++
Sbjct: 260 MV 261
>gi|71005310|ref|XP_757321.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
gi|74703958|sp|Q4PFD9.1|PRP5_USTMA RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|46096725|gb|EAK81958.1| hypothetical protein UM01174.1 [Ustilago maydis 521]
Length = 1156
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W +P + + + + G+ PT IQS MP A+++ +DI+G A+TGSGKT+AF +P
Sbjct: 475 LTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMP-AIMSGRDIIGVAKTGSGKTMAFLLP 533
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E E
Sbjct: 534 MFRHI--KDQRPVEPSE 548
>gi|418463832|ref|ZP_13034780.1| DNA/RNA helicase, superfamily II, partial [Saccharomonospora
azurea SZMC 14600]
gi|359731170|gb|EHK80276.1| DNA/RNA helicase, superfamily II, partial [Saccharomonospora
azurea SZMC 14600]
Length = 406
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + N+P+ + RAL + G P IQ+ +P AL R D++G A+TGSGKTLAFG+
Sbjct: 1 MSTFAELNLPQPLHRALQKAGMDAPFPIQAATLPDALAGR-DVLGRAQTGSGKTLAFGLA 59
Query: 61 ILT 63
+L+
Sbjct: 60 LLS 62
>gi|334335907|ref|YP_004541059.1| DEAD/DEAH box helicase [Isoptericola variabilis 225]
gi|334106275|gb|AEG43165.1| DEAD/DEAH box helicase domain protein [Isoptericola variabilis
225]
Length = 447
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F +P I+R L +G TP IQS +P AL A D++G TGSGKTLAF +P
Sbjct: 1 MTTFADFGLPSPIVRVLADQGIATPFPIQSASLPDAL-AGTDVLGRGRTGSGKTLAFSLP 59
Query: 61 ILT 63
++T
Sbjct: 60 VVT 62
>gi|435851473|ref|YP_007313059.1| DNA/RNA helicase, superfamily II [Methanomethylovorans hollandica
DSM 15978]
gi|433662103|gb|AGB49529.1| DNA/RNA helicase, superfamily II [Methanomethylovorans hollandica
DSM 15978]
Length = 534
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ ++++ L +KGF PT IQ V+P + +DI+G A+TG+GKT AFGIPI+
Sbjct: 10 FNLSQSMLDVLEKKGFFKPTPIQIHVIPPLMKGDRDIIGQAQTGTGKTAAFGIPII 65
>gi|436840104|ref|YP_007324482.1| DEAD/DEAH box helicase domain protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432169010|emb|CCO22376.1| DEAD/DEAH box helicase domain protein [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 585
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + + II AL +KGF PT IQ +P L KDIVG A TG+GKT AFG+P
Sbjct: 67 MEKFRNLGLSDAIIDALAKKGFTAPTPIQEQTIPMLLSGEKDIVGQAMTGTGKTAAFGLP 126
Query: 61 IL 62
IL
Sbjct: 127 IL 128
>gi|20092752|ref|NP_618827.1| ATP-dependent RNA helicase [Methanosarcina acetivorans C2A]
gi|19918045|gb|AAM07307.1| ATP-dependent RNA helicase [Methanosarcina acetivorans C2A]
Length = 555
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 80/158 (50%), Gaps = 23/158 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A++ + ++ ++AL +KGF+ PT IQ V+P L DI+G A+TG+GKT AFG P
Sbjct: 4 LAKFKALGLSDSTLKALKKKGFEEPTPIQEKVIPLFLKGESDIIGQAQTGTGKTTAFGAP 63
Query: 61 ILTGIVNK-------LENPTEE------DENDSARKD----IV----GAAETGSGKTLAF 99
I+ I K + PT E +E +S + D +V G + T + L
Sbjct: 64 IIEKIPEKSGYVQAIILTPTRELAIQVSEELNSIKGDKKLHVVPIYGGQSMTQQLRVLKS 123
Query: 100 GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
G+ I+ G ++ + E D LE A VL+E +E
Sbjct: 124 GVDIVVGTPGRIIDHLERKSLD--LEHIAYFVLDEADE 159
>gi|257055065|ref|YP_003132897.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
gi|256584937|gb|ACU96070.1| DNA/RNA helicase, superfamily II [Saccharomonospora viridis DSM
43017]
Length = 449
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ N+P+ + RAL + G TP IQ+ +P AL R D++G A+TGSGKTLAFG+ +L+
Sbjct: 22 FADLNLPKALHRALRKAGLHTPFPIQAATLPDALAGR-DVLGRAQTGSGKTLAFGLALLS 80
>gi|346327471|gb|EGX97067.1| ATP dependent RNA helicase, putative [Cordyceps militaris CM01]
Length = 852
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+WV N+ I+ A+ + GF +PT IQ+ +P + A D++G A+TGSGKTLAFGIPI+
Sbjct: 231 DWVALNLSPAIVSAIGKLGFTSPTAIQAESIPP-INAGADVIGKAQTGSGKTLAFGIPIV 289
>gi|91788228|ref|YP_549180.1| DEAD/DEAH box helicase [Polaromonas sp. JS666]
gi|91697453|gb|ABE44282.1| DEAD/DEAH box helicase-like protein [Polaromonas sp. JS666]
Length = 422
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
+RA+ KG++ PT IQS +P+ LL R D+VG+A+TGSGKT AF +P+L + N
Sbjct: 16 FLRAIGDKGYRAPTAIQSQAIPAILLGR-DVVGSAQTGSGKTAAFALPMLQQLAN 69
>gi|19705271|ref|NP_602766.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gi|19713234|gb|AAL94065.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 528
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E I++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLSEKILKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|332375408|gb|AEE62845.1| unknown [Dendroctonus ponderosae]
Length = 469
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + + +A Q +KTP+KIQ +P AL KDI+G AETGSGKT AF +PIL
Sbjct: 41 WSDLGLVDVLCKACEQLKWKTPSKIQRESIPVALQG-KDIIGLAETGSGKTAAFALPILQ 99
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 100 AL---LENP 105
>gi|158297447|ref|XP_317676.4| AGAP007825-PA [Anopheles gambiae str. PEST]
gi|157015199|gb|EAA12654.5| AGAP007825-PA [Anopheles gambiae str. PEST]
Length = 670
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W++ P+ I+ + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+LT
Sbjct: 399 WLESGFPKEILEIIDKVGYKDPTPIQRQAIPIGLQNR-DIIGIAETGSGKTLAFLIPLLT 457
Query: 64 GI 65
I
Sbjct: 458 WI 459
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ + +++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 291 MRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQR-DVIGIAETGSGKTAAFVLP 349
Query: 61 ILTGIVNKLENPTEEDE 77
+LT +++L +EE+E
Sbjct: 350 MLT-YISRLPPMSEENE 365
>gi|448099184|ref|XP_004199083.1| Piso0_002489 [Millerozyma farinosa CBS 7064]
gi|359380505|emb|CCE82746.1| Piso0_002489 [Millerozyma farinosa CBS 7064]
Length = 572
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 38/62 (61%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ + +A+ GF PT +QS +P AL ++DI+ A TGSGKT A+ IPIL
Sbjct: 17 WSLFNLDPRLFQAIDHVGFSNPTYVQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPILN 76
Query: 64 GI 65
+
Sbjct: 77 NL 78
>gi|348026760|ref|YP_004766565.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
elsdenii DSM 20460]
gi|341822814|emb|CCC73738.1| ATP-dependent RNA helicase DeaD family protein [Megasphaera
elsdenii DSM 20460]
Length = 526
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ NI E IIRAL + GF+ PT IQ+ +P A+ + D++G A+TG+GKT A+GIP
Sbjct: 2 LEQFQNLNISEVIIRALNEMGFEEPTPIQAESIPVAM-SGSDMIGQAQTGTGKTAAYGIP 60
Query: 61 ILTGIV 66
+L I+
Sbjct: 61 VLEKIL 66
>gi|302676285|ref|XP_003027826.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
gi|300101513|gb|EFI92923.1| hypothetical protein SCHCODRAFT_70633 [Schizophyllum commune H4-8]
Length = 651
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW + + +++ L + F PT IQ+ + AL R D+VG A+TGSGKTLA+G+P
Sbjct: 77 LEEWEPYALHPQLLKTLQARNFLKPTPIQAAALIPALAGR-DVVGVAQTGSGKTLAYGLP 135
Query: 61 ILTGIVNKLENP 72
IL + LENP
Sbjct: 136 ILHHL---LENP 144
>gi|402778075|ref|YP_006632019.1| ATP-dependent RNA helicase [Bacillus subtilis QB928]
gi|402483254|gb|AFQ59763.1| ATP-dependent RNA helicase [Bacillus subtilis QB928]
Length = 490
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 12 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 70
Query: 61 IL 62
+
Sbjct: 71 LC 72
>gi|411008027|ref|ZP_11384356.1| ATP-dependent RNA helicase [Streptomyces globisporus C-1027]
Length = 545
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+PE I+R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P L +
Sbjct: 58 LGLPEGIVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPTLAAL 115
>gi|343517883|ref|ZP_08754879.1| cold-shock DEAD-box protein A [Haemophilus pittmaniae HK 85]
gi|343394734|gb|EGV07281.1| cold-shock DEAD-box protein A [Haemophilus pittmaniae HK 85]
Length = 604
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 4/75 (5%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M E + FN +PE I+ A+ GF+TP+ IQ + +P LLA +D++G A+TGSGKT AF
Sbjct: 1 MTEQMTFNELGLPEFILNAVSDLGFETPSPIQQVCIPH-LLAGRDVLGMAQTGSGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+PIL I + ++P
Sbjct: 60 ALPILAQIDSHQKHP 74
>gi|325068862|ref|ZP_08127535.1| DEAD/DEAH box helicase domain protein [Actinomyces oris K20]
Length = 470
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P +++A+ GF TPT IQ +P LLA +D+VG A+TG+GKT AFG+P+L
Sbjct: 176 FADLGLPGDLLKAVTDMGFVTPTAIQKEAIP-VLLAGRDVVGVAQTGTGKTAAFGLPLLD 234
Query: 64 GIVNK 68
+ ++
Sbjct: 235 AVDSR 239
>gi|254517068|ref|ZP_05129126.1| cold-shock deAd-box protein a [gamma proteobacterium NOR5-3]
gi|219674573|gb|EED30941.1| cold-shock deAd-box protein a [gamma proteobacterium NOR5-3]
Length = 609
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P +++AL G++TP+ IQ+M +P LL KD+VG A+TG+GKT AF +PIL +
Sbjct: 13 LQLPAFLMKALSDVGYETPSAIQTMTIPP-LLEGKDLVGQAQTGTGKTAAFALPILARLD 71
Query: 67 NKLENP 72
KL P
Sbjct: 72 PKLSKP 77
>gi|189467630|ref|ZP_03016415.1| hypothetical protein BACINT_04020 [Bacteroides intestinalis DSM
17393]
gi|189435894|gb|EDV04879.1| DEAD/DEAH box helicase [Bacteroides intestinalis DSM 17393]
Length = 482
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + NI E + RAL +K + TPT IQ +P AL R D++G A+TG+GKT AF +P
Sbjct: 1 MMTFKQMNISEPVCRALLEKNYSTPTLIQEQAIPEALTGR-DLLGLAQTGTGKTAAFAVP 59
Query: 61 IL 62
I+
Sbjct: 60 II 61
>gi|345563744|gb|EGX46729.1| hypothetical protein AOL_s00097g477 [Arthrobotrys oligospora ATCC
24927]
Length = 854
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + N+ I+R L F TPT IQS +P ALLAR DIVG A TGSGKT A+ +PIL
Sbjct: 321 FQQMNLSRPILRGLGHINFTTPTAIQSRTIPIALLAR-DIVGGAVTGSGKTAAYMVPIL 378
>gi|305667396|ref|YP_003863683.1| DEAD/DEAH box helicase-like protein [Maribacter sp. HTCC2170]
gi|88709444|gb|EAR01677.1| DEAD/DEAH box helicase-like protein [Maribacter sp. HTCC2170]
Length = 432
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I E I++AL Q+G+ +PT IQ +P LL KD++G A+TG+GKT AF IPIL
Sbjct: 3 FKNLGIIEPILKALGQEGYSSPTPIQEQAVP-ILLKGKDLLGCAQTGTGKTAAFAIPILQ 61
Query: 64 GIVNKLENPTEEDENDSARK 83
I N + ND RK
Sbjct: 62 QIHN------DRQSNDRHRK 75
>gi|428281561|ref|YP_005563296.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. natto
BEST195]
gi|291486518|dbj|BAI87593.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. natto
BEST195]
Length = 479
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|254389955|ref|ZP_05005177.1| ATP-dependent RNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|197703664|gb|EDY49476.1| ATP-dependent RNA helicase [Streptomyces clavuligerus ATCC 27064]
Length = 501
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +PE ++R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P L
Sbjct: 80 FADLGLPEGVVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPTL 137
>gi|170744521|ref|YP_001773176.1| DEAD/DEAH box helicase [Methylobacterium sp. 4-46]
gi|168198795|gb|ACA20742.1| DEAD/DEAH box helicase domain protein [Methylobacterium sp. 4-46]
Length = 499
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++V F + I++AL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFVDFGLAAPILKALAETGYVTPTPIQAQAVPQAMAGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 ILTGIVNKLENPTEEDENDSAR 82
IL + + E P R
Sbjct: 60 ILHRLAS--ETPQRRAPRRGCR 79
>gi|296329829|ref|ZP_06872313.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305676555|ref|YP_003868227.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. spizizenii
str. W23]
gi|296152868|gb|EFG93733.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. spizizenii
ATCC 6633]
gi|305414799|gb|ADM39918.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. spizizenii
str. W23]
Length = 479
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|221311883|ref|ZP_03593730.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. 168]
gi|221316207|ref|ZP_03598012.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. NCIB 3610]
gi|221321119|ref|ZP_03602413.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. JH642]
gi|221325403|ref|ZP_03606697.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. SMY]
gi|255767828|ref|NP_391790.2| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. 168]
gi|452912634|ref|ZP_21961262.1| ATP-dependent RNA helicase dbpA [Bacillus subtilis MB73/2]
gi|254763269|sp|P42305.2|DBPA_BACSU RecName: Full=ATP-dependent RNA helicase DbpA
gi|225185456|emb|CAB15947.2| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. 168]
gi|407962755|dbj|BAM55995.1| ATP-dependent RNA helicase [Bacillus subtilis BEST7613]
gi|407966768|dbj|BAM60007.1| ATP-dependent RNA helicase [Bacillus subtilis BEST7003]
gi|452117662|gb|EME08056.1| ATP-dependent RNA helicase dbpA [Bacillus subtilis MB73/2]
Length = 479
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|443922417|gb|ELU41869.1| delta-sterol C-methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 1600
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW ++ I +L + F PT IQ +P A R D+VG AETGSGKTLA+ +P
Sbjct: 134 LPEWASMSLHPIISHSLLELSFTNPTPIQKSALPFAQQGR-DVVGVAETGSGKTLAYSLP 192
Query: 61 ILTGIVNKLENPTEEDENDSARK 83
IL I L NPT ++S+RK
Sbjct: 193 ILQYI---LSNPT----SNSSRK 208
>gi|386760602|ref|YP_006233819.1| ATP-dependent RNA helicase [Bacillus sp. JS]
gi|384933885|gb|AFI30563.1| ATP-dependent RNA helicase [Bacillus sp. JS]
Length = 479
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|430757511|ref|YP_007207571.1| ATP-dependent RNA helicase DbpA [Bacillus subtilis subsp.
subtilis str. BSP1]
gi|430022031|gb|AGA22637.1| ATP-dependent RNA helicase DbpA [Bacillus subtilis subsp.
subtilis str. BSP1]
Length = 479
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|428180708|gb|EKX49574.1| hypothetical protein GUITHDRAFT_162044 [Guillardia theta
CCMP2712]
Length = 772
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + + + IIR++ ++G++ PT IQ +P +L D++GAAETG+GKT AFGIP
Sbjct: 1 MAAFAELGVMGEIIRSIDEEGWQLPTPIQQEAIP-LILGGGDVLGAAETGTGKTGAFGIP 59
Query: 61 ILTGIVNKLENPTEED 76
IL + L+N D
Sbjct: 60 ILQLVHENLQNQASSD 75
>gi|443631371|ref|ZP_21115552.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443349176|gb|ELS63232.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 479
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|350268205|ref|YP_004879512.1| ATP-dependent RNA helicase DbpA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349601092|gb|AEP88880.1| ATP-dependent RNA helicase DbpA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 479
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|433630356|ref|YP_007263984.1| Putative cold-shock dead-box protein a homolog DeaD
(ATP-dependent RNA helicase DeaD homolog)
[Mycobacterium canettii CIPT 140070010]
gi|432161949|emb|CCK59308.1| Putative cold-shock dead-box protein a homolog DeaD
(ATP-dependent RNA helicase DeaD homolog)
[Mycobacterium canettii CIPT 140070010]
Length = 563
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + IP ++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IP+
Sbjct: 13 ATFADLQIPPRVLRAIGDVGYESPTAIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPM 71
Query: 62 LTGI 65
L+ I
Sbjct: 72 LSKI 75
>gi|665989|dbj|BAA11693.1| deaD [Bacillus subtilis]
Length = 479
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++++P+ I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 374 WKEYSLPDHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 432
Query: 64 GI 65
I
Sbjct: 433 WI 434
>gi|418030845|ref|ZP_12669330.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351471904|gb|EHA32017.1| ATP-dependent RNA helicase [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 479
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|321313476|ref|YP_004205763.1| ATP-dependent RNA helicase [Bacillus subtilis BSn5]
gi|320019750|gb|ADV94736.1| ATP-dependent RNA helicase [Bacillus subtilis BSn5]
Length = 479
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|120403427|ref|YP_953256.1| DEAD/DEAH box helicase [Mycobacterium vanbaalenii PYR-1]
gi|119956245|gb|ABM13250.1| DEAD/DEAH box helicase domain protein [Mycobacterium vanbaalenii
PYR-1]
Length = 443
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P ++++L Q+G P IQ+ +P AL R D++G +TGSGKTLAF IP++T
Sbjct: 6 FTDLGVPAPLVQSLSQRGITEPFPIQAATLPDALAGR-DVLGRGKTGSGKTLAFSIPLVT 64
Query: 64 GIVNKLENPTE 74
+ + P+
Sbjct: 65 ALTGRRSQPSR 75
>gi|269119742|ref|YP_003307919.1| DEAD/DEAH box helicase [Sebaldella termitidis ATCC 33386]
gi|268613620|gb|ACZ07988.1| DEAD/DEAH box helicase domain protein [Sebaldella termitidis ATCC
33386]
Length = 530
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + E ++AL +KGF +P+ IQ++V+P L R +++G A+TG+GKT AF IPIL
Sbjct: 6 FLDLGVSEATLKALDKKGFTSPSAIQTLVIPELLKERTNLIGQAQTGTGKTAAFAIPIL 64
>gi|358347102|ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 781
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ + + +++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 285 MRSWVESKLSQELLKAVEKAGYKTPSPIQMAAIPLGLQQR-DVIGVAETGSGKTAAFVLP 343
Query: 61 ILTGIVNKLENPTEEDE 77
+L+ I +L +EE+E
Sbjct: 344 MLSYIT-RLPPISEENE 359
>gi|403216467|emb|CCK70964.1| hypothetical protein KNAG_0F03020 [Kazachstania naganishii CBS
8797]
Length = 598
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F + +++A+ + G PT +QS +P AL ++DI+ A TGSGKTLA+ +P++ I+
Sbjct: 23 FQLDARLLQAVKRAGLHHPTLVQSHAIPLALQQKRDIIAKAATGSGKTLAYLVPVIQTIL 82
Query: 67 NKLEN-PTEEDENDS 80
N N P E DE S
Sbjct: 83 NYKANAPNEADEGSS 97
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 31/87 (35%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLEN-PTEEDENDSGLEEEAEEVLEELEEESA 140
++DI+ A TGSGKTLA+ +P++ I+N N P E DE S L
Sbjct: 56 KRDIIAKAATGSGKTLAYLVPVIQTILNYKANAPNEADEGSSTL---------------- 99
Query: 141 NTTEFVKKTRNKLYALILAPTRELAIQ 167
+IL PTRELA Q
Sbjct: 100 --------------GIILVPTRELAQQ 112
>gi|367052807|ref|XP_003656782.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
gi|347004047|gb|AEO70446.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
Length = 718
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + N+P ++ ++ G+ PT IQ +P AL AR D++G A TGSGKT AF +P
Sbjct: 280 MRSWQESNLPRRLLEIVHSVGYDEPTPIQRAAIPIALQAR-DLIGVAVTGSGKTAAFLLP 338
Query: 61 ILTGIVNKLENPTEEDEND 79
+L +++L TE+++ND
Sbjct: 339 LLV-YISELPPLTEDNKND 356
>gi|224014332|ref|XP_002296829.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968684|gb|EED87030.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 884
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 18/86 (20%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
R+D+VGAA TGSGKTL++G+PIL ++ GL++ L+ EE+SA+
Sbjct: 229 RRDVVGAAPTGSGKTLSYGLPILQWVL--------------GLDDAEIAALD--EEDSAD 272
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
E K + L ALIL PTRELAIQ
Sbjct: 273 AGE--PKQKRPLQALILVPTRELAIQ 296
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 22 FKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+ PT IQ+ +P+A+L R+D+VGAA TGSGKTL++G+PIL ++
Sbjct: 211 YSYPTPIQASTLPAAILGRRDVVGAAPTGSGKTLSYGLPILQWVL 255
>gi|45190633|ref|NP_984887.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|74693626|sp|Q757I6.1|MAK5_ASHGO RecName: Full=ATP-dependent RNA helicase MAK5
gi|44983612|gb|AAS52711.1| AER027Wp [Ashbya gossypii ATCC 10895]
gi|374108110|gb|AEY97017.1| FAER027Wp [Ashbya gossypii FDAG1]
Length = 752
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ W + T+++ L + GF PT+IQ +P AL DI+G A TGSGKTLA+GI
Sbjct: 178 LPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGH-DIMGKASTGSGKTLAYGI 236
Query: 60 PILTGIV 66
PIL GI+
Sbjct: 237 PILEGII 243
>gi|366996959|ref|XP_003678242.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
gi|342304113|emb|CCC71900.1| hypothetical protein NCAS_0I02320 [Naumovozyma castellii CBS 4309]
Length = 731
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 1 MAEWVKF-NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ +W K TI++ L GF PT+IQ+ +P AL +DI+G A TGSGKTLA+GI
Sbjct: 150 LPDWTKLATFSTTIMQGLQSLGFTKPTEIQAKAIPFAL-KNEDIMGKASTGSGKTLAYGI 208
Query: 60 PILTGIVNKLENPTEE 75
PIL ++ N + +
Sbjct: 209 PILENLIKTFGNDSNK 224
>gi|326432948|gb|EGD78518.1| hypothetical protein PTSG_12845 [Salpingoeca sp. ATCC 50818]
Length = 984
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ W+ F + +I+ L + F PT +Q + A+ +DIV AETGSGKTLAFG+P
Sbjct: 289 MSAWLPFGLHSSIMEGLQAQRFTKPTPVQEECLQPAIQGFRDIVACAETGSGKTLAFGLP 348
Query: 61 ILTGIVN 67
++ I+N
Sbjct: 349 VIQHIIN 355
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 28/85 (32%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
+DIV AETGSGKTLAFG+P++ I+N
Sbjct: 329 RDIVACAETGSGKTLAFGLPVIQHIINL----------------------------RQQG 360
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
+ +L AL++ PTRELAIQ
Sbjct: 361 DDGDDDALTRLKALVVCPTRELAIQ 385
>gi|72382486|ref|YP_291841.1| helicase, C-terminal:DEAD/DEAH box helicase, N-terminal
[Prochlorococcus marinus str. NATL2A]
gi|72002336|gb|AAZ58138.1| ATP-dependent RNA helicase CsdA [Prochlorococcus marinus str.
NATL2A]
Length = 589
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +FN E +I+ + KG+ +PT IQ +P LL R D+VG A+TG+GKT AF +PIL
Sbjct: 38 FSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGR-DLVGQAQTGTGKTAAFALPILE 96
Query: 64 GIVNKLENP 72
+ + +P
Sbjct: 97 RLKKNVGHP 105
>gi|255729782|ref|XP_002549816.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132885|gb|EER32442.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 571
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +I +I +Y+ GF PT IQ +P +L+ R D+VG AETGSGKTL+F IP
Sbjct: 157 LRSWDESSINSKLISIIYKLGFNQPTSIQRASIPLSLIKR-DVVGVAETGSGKTLSFLIP 215
Query: 61 ILTGIVNKLEN 71
+ I++ EN
Sbjct: 216 LFNYILSIDEN 226
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ + +++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 288 MRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQR-DVIGIAETGSGKTAAFVLP 346
Query: 61 ILTGIVNKLENPTEEDE 77
+LT +++L +EE+E
Sbjct: 347 MLT-YISRLPPISEENE 362
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ + +++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 305 MRSWVESKLSTELLKAVERAGYKTPSPIQMAAIPLGLQQR-DVIGIAETGSGKTAAFVLP 363
Query: 61 ILTGIVNKLENPTEEDE 77
+LT +++L +EE+E
Sbjct: 364 MLT-YISRLPPMSEENE 379
>gi|124026185|ref|YP_001015301.1| ATP-dependent RNA helicase [Prochlorococcus marinus str. NATL1A]
gi|123961253|gb|ABM76036.1| putative ATP-dependent RNA helicase [Prochlorococcus marinus str.
NATL1A]
Length = 589
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +FN E +I+ + KG+ +PT IQ +P LL R D+VG A+TG+GKT AF +PIL
Sbjct: 38 FSEFNFSEELIQTISDKGYSSPTPIQKAAIPELLLGR-DLVGQAQTGTGKTAAFALPILE 96
Query: 64 GIVNKLENP 72
+ + +P
Sbjct: 97 RLKKNVGHP 105
>gi|71003417|ref|XP_756389.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
gi|46095767|gb|EAK81000.1| hypothetical protein UM00242.1 [Ustilago maydis 521]
Length = 957
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 40/168 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET-GSGKTLAFGI 59
+ W + + RAL KGFK PT+IQ +P AL +++ + ++ + + A G
Sbjct: 240 LPAWSHLALHSDLKRALLHKGFKQPTEIQRKAIPFALGLQQEATSSDDSEDTADSAAIGA 299
Query: 60 PILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDE 119
P + ++D+VG ++TGSGKTLA+G+PIL + EN
Sbjct: 300 P-----------------STRRKRDVVGVSQTGSGKTLAYGLPILNYLFENAENAIA--- 339
Query: 120 NDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
S+ V L ALIL PTRELA+Q
Sbjct: 340 -------------------SSCRRNAVDDLPPPLGALILCPTRELALQ 368
>gi|70996226|ref|XP_752868.1| ATP-dependent RNA helicase (Drs1) [Aspergillus fumigatus Af293]
gi|74672247|sp|Q4WRV2.1|DRS1_ASPFU RecName: Full=ATP-dependent RNA helicase drs1
gi|66850503|gb|EAL90830.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
Af293]
gi|159131623|gb|EDP56736.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus fumigatus
A1163]
Length = 830
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F TPT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 315 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 369
>gi|384564988|ref|ZP_10012092.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
gi|384520842|gb|EIE98037.1| DNA/RNA helicase, superfamily II [Saccharomonospora glauca K62]
Length = 446
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + N+P+ + RAL + G +TP IQ+ +P AL R D++G A+TGSGKTLAFG+ +L
Sbjct: 21 FAELNLPQPLNRALGKAGMRTPFPIQAATLPDALAGR-DVLGRAQTGSGKTLAFGLALL 78
>gi|393220338|gb|EJD05824.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 740
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP TI+ + + G+K P+ IQ +P L R D++G AETGSGKT AF IP
Sbjct: 314 LRSWTESEIPPTILEVVEKVGYKEPSAIQRQAIPIGLQNR-DLIGIAETGSGKTAAFVIP 372
Query: 61 ILTGIVN 67
+LT I N
Sbjct: 373 MLTYISN 379
>gi|407770302|ref|ZP_11117672.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407286580|gb|EKF12066.1| ATP-dependent RNA helicase, DEAD/DEAH box family protein
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 609
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + E ++RAL +G+ PT IQ+ +PS LL KD++G A+TG+GKT AF +P
Sbjct: 1 MTQFSDLGLAEPVLRALKHEGYDAPTPIQAQAIPS-LLEGKDLLGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|354605411|ref|ZP_09023399.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
gi|353346953|gb|EHB91231.1| hypothetical protein HMPREF9450_02314 [Alistipes indistinctus YIT
12060]
Length = 400
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
NI E I+RA+ +KG+ PT IQ +P +L KDI G A+TG+GKT AF IPIL ++
Sbjct: 6 LNIAEPILRAVCEKGYNEPTPIQEQAIP-VVLRGKDIFGIAQTGTGKTAAFAIPILQHLL 64
Query: 67 NKLEN 71
K E
Sbjct: 65 KKNEQ 69
>gi|58263322|ref|XP_569071.1| DEAD box RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108656|ref|XP_776981.1| hypothetical protein CNBB5090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818048|sp|P0CR07.1|DBP10_CRYNB RecName: Full=ATP-dependent RNA helicase DBP10
gi|338818049|sp|P0CR06.1|DBP10_CRYNJ RecName: Full=ATP-dependent RNA helicase DBP10
gi|50259664|gb|EAL22334.1| hypothetical protein CNBB5090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223721|gb|AAW41764.1| DEAD box RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 802
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSAL-LARKDIVGAAETGSGKTLAFGIPI 61
+W N+ +IR+L + FKTPT IQ +P AL +DI+G A TGSGKTLA+ IP+
Sbjct: 28 QWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPL 87
Query: 62 L--TGIVNKLENP 72
L TG + + P
Sbjct: 88 LQRTGSTHHGQGP 100
>gi|405979651|ref|ZP_11037994.1| hypothetical protein HMPREF9241_00717 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404392067|gb|EJZ87128.1| hypothetical protein HMPREF9241_00717 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 596
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F + + I+ AL KG P IQ++ +P AL R DI+G A+TG+GKTL FGIP+L
Sbjct: 75 FADFGVTDPIVDALEDKGITHPFPIQALTLPPAL-DRHDIIGQAKTGTGKTLGFGIPVLE 133
Query: 64 GIV 66
++
Sbjct: 134 DVI 136
>gi|350425682|ref|XP_003494199.1| PREDICTED: cold-shock DEAD box protein A-like [Bombus impatiens]
Length = 734
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+V +PE I++AL GF P+ IQ+ +P LL +D++G A+TGSGKT AF +P LT
Sbjct: 7 FVDLGLPEEILQALNDLGFTKPSPIQAQCIP-LLLKGEDVLGMAQTGSGKTAAFSLPFLT 65
Query: 64 GIVNKLENP 72
I L+ P
Sbjct: 66 NIDVSLKAP 74
>gi|421145364|ref|ZP_15605243.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
gi|395488237|gb|EJG09113.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
fusiforme ATCC 51190]
Length = 528
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|296328514|ref|ZP_06871033.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|296154323|gb|EFG95122.1| DEAD/DEAH box family ATP-dependent RNA helicase [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 528
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|374372577|ref|ZP_09630240.1| DEAD/DEAH box helicase domain protein [Niabella soli DSM 19437]
gi|373235322|gb|EHP55112.1| DEAD/DEAH box helicase domain protein [Niabella soli DSM 19437]
Length = 549
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + I E ++++L + GFKTPT IQ +P L KD +G A+TG+GKT AFG+P
Sbjct: 1 MVTFESLGIEEGLLQSLQKIGFKTPTPIQEQAIPVLLQGTKDFIGLAQTGTGKTAAFGLP 60
Query: 61 ILTGIVNK 68
+L ++NK
Sbjct: 61 LLQ-LINK 67
>gi|34763211|ref|ZP_00144175.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256846171|ref|ZP_05551629.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
gi|27887121|gb|EAA24228.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
vincentii ATCC 49256]
gi|256719730|gb|EEU33285.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_36A2]
Length = 528
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|237742838|ref|ZP_04573319.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
gi|229430486|gb|EEO40698.1| ATP-dependent RNA helicase [Fusobacterium sp. 4_1_13]
Length = 528
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|156549811|ref|XP_001606554.1| PREDICTED: probable ATP-dependent RNA helicase DDX49-like
[Nasonia vitripennis]
Length = 456
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M E+ NI II L G K PT IQ +P A+L+ KD +G A+TGSGKTLAF +P
Sbjct: 1 MTEFTDLNISSWIIDQLKLIGVKKPTPIQQNCIP-AILSGKDCIGCAKTGSGKTLAFALP 59
Query: 61 ILT-------GIVNKLENPTEE 75
IL GI + PT E
Sbjct: 60 ILQKLSEDPYGIFALVLTPTRE 81
>gi|426200230|gb|EKV50154.1| hypothetical protein AGABI2DRAFT_216556, partial [Agaricus bisporus
var. bisporus H97]
Length = 747
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IPE+I+ + + G+K P+ IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 319 LRSWRESQIPESILECIDRIGYKEPSPIQRQAIPIGLQNR-DIIGIAETGSGKTAAFVIP 377
Query: 61 ILTGIVN 67
+L I N
Sbjct: 378 MLAFIGN 384
>gi|392427583|ref|YP_006468577.1| DNA/RNA helicase, superfamily II [Desulfosporosinus acidiphilus
SJ4]
gi|391357546|gb|AFM43245.1| DNA/RNA helicase, superfamily II [Desulfosporosinus acidiphilus
SJ4]
Length = 488
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + + ETIIR++ GF+ T IQ M +P AL R D++G A+TG+GKT A+GIP
Sbjct: 1 MASFTDLGLSETIIRSIVNMGFEETTPIQEMTIPIALQGR-DLIGQAQTGTGKTAAYGIP 59
Query: 61 IL 62
++
Sbjct: 60 LI 61
>gi|147774689|emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]
Length = 661
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ + +++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 258 MRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQR-DVIGIAETGSGKTAAFVLP 316
Query: 61 ILTGIVNKLENPTEEDE 77
+LT +++L +EE+E
Sbjct: 317 MLT-YISRLPPISEENE 332
>gi|254302223|ref|ZP_04969581.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|422340165|ref|ZP_16421119.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
gi|148322415|gb|EDK87665.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|355370105|gb|EHG17493.1| ATP-dependent RNA helicase [Fusobacterium nucleatum subsp.
polymorphum F0401]
Length = 529
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|349602917|gb|AEP98907.1| putative ATP-dependent RNA helicase DDX46-like protein, partial
[Equus caballus]
Length = 667
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 9 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 67
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 68 HIMD--QRPLEEGE 79
>gi|119494918|ref|XP_001264258.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
gi|142982588|sp|A1D1R8.1|DRS1_NEOFI RecName: Full=ATP-dependent RNA helicase drs1
gi|119412420|gb|EAW22361.1| ATP-dependent RNA helicase (Drs1), putative [Neosartorya fischeri
NRRL 181]
Length = 819
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F TPT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 304 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 358
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 3/83 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + +P +I+ + + G+K PT IQ +P L R DI+G AETGSGKTLAF +P
Sbjct: 157 LRKWSESGLPSSILDIIKELGYKDPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLLP 215
Query: 61 ILTGIVN--KLENPTEEDENDSA 81
+L I + K+E + D+ A
Sbjct: 216 LLVWITSLPKIERQEDADQGPYA 238
>gi|409082396|gb|EKM82754.1| hypothetical protein AGABI1DRAFT_104628 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 747
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IPE+I+ + + G+K P+ IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 319 LRSWRESQIPESILECIDRIGYKEPSPIQRQAIPIGLQNR-DIIGIAETGSGKTAAFVIP 377
Query: 61 ILTGIVN 67
+L I N
Sbjct: 378 MLAFIGN 384
>gi|389748974|gb|EIM90151.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Stereum hirsutum FP-91666 SS1]
Length = 809
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W++ IP+ I+ + G+K P+ IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 381 LRSWLESTIPQQILDVVDSVGYKEPSPIQRQAIPIGLQNR-DIIGIAETGSGKTAAFVIP 439
Query: 61 ILTGIVNKLENPTEEDEN 78
+LT ++KL T+E+ +
Sbjct: 440 MLT-FISKLPPFTDENRH 456
>gi|217077055|ref|YP_002334771.1| ATP-dependent RNA helicase [Thermosipho africanus TCF52B]
gi|419759635|ref|ZP_14285925.1| ATP-dependent RNA helicase [Thermosipho africanus H17ap60334]
gi|217036908|gb|ACJ75430.1| ATP-dependent RNA helicase [Thermosipho africanus TCF52B]
gi|407515319|gb|EKF50088.1| ATP-dependent RNA helicase [Thermosipho africanus H17ap60334]
Length = 516
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
FN+ E +RA+ +KGF+ PT +Q V+P+ L K+++ A+TG+GKT AFGIP++ +
Sbjct: 6 FNLSEKTLRAINEKGFENPTPVQEKVIPTLLKKEKNLIVQAKTGTGKTAAFGIPLIELLE 65
Query: 67 NK 68
NK
Sbjct: 66 NK 67
>gi|441477763|dbj|BAM75194.1| vasa-like gene-4, partial [Pinctada fucata]
Length = 593
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 8 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
N PE I + L Q+ F+ PT IQS+ P A R D++G A+TGSGKTLAF +P L I+N
Sbjct: 191 NFPEYIQKTLMQQDFEKPTSIQSVTWPLASSGR-DVIGIAQTGSGKTLAFMLPALVHIMN 249
Query: 68 K 68
+
Sbjct: 250 Q 250
>gi|398816782|ref|ZP_10575424.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
gi|398031995|gb|EJL25360.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. BC25]
Length = 520
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + F + +I+RAL GF+ T IQ +P AL R D++G A+TG+GKT AFGIP
Sbjct: 1 MATFNDFGLHHSIVRALSNMGFEEATAIQDQTVPVALQGR-DLIGQAQTGTGKTAAFGIP 59
Query: 61 IL 62
++
Sbjct: 60 LI 61
>gi|375099478|ref|ZP_09745741.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea
NA-134]
gi|374660210|gb|EHR60088.1| DNA/RNA helicase, superfamily II [Saccharomonospora cyanea
NA-134]
Length = 442
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ N+P+ + AL + G +TP IQS +P AL R D++G A+TGSGKTLAFG+ +LT
Sbjct: 17 FADLNLPQPLHSALRKTGMETPFPIQSATLPDALAGR-DVLGRAQTGSGKTLAFGLALLT 75
>gi|302543660|ref|ZP_07296002.1| putative ATP-dependent RNA helicase [Streptomyces hygroscopicus
ATCC 53653]
gi|302461278|gb|EFL24371.1| putative ATP-dependent RNA helicase [Streptomyces himastatinicus
ATCC 53653]
Length = 736
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE I+R L Q G TP IQ+ +P A+ A KDI+G TGSGKTL+FG+P+LT
Sbjct: 65 FAELGLPEQIVRKLAQNGVTTPFPIQAATIPDAM-AGKDILGRGRTGSGKTLSFGLPLLT 123
Query: 64 GI 65
+
Sbjct: 124 SL 125
>gi|423302506|ref|ZP_17280528.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
gi|408470382|gb|EKJ88916.1| hypothetical protein HMPREF1057_03669 [Bacteroides finegoldii
CL09T03C10]
Length = 374
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI E I++A+ +KG+ PT IQ +P+AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 6 LNIIELILKAIEEKGYTVPTSIQEKAIPAAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|380478434|emb|CCF43606.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 779
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV + + A+ + F PTKIQ+ +P +LA D++G A TGSGKTLAF IP
Sbjct: 213 MTPWVDLGLSPATVSAIAKLKFAKPTKIQASTIPE-ILAGHDVIGKASTGSGKTLAFSIP 271
Query: 61 ILTGIVNKLE 70
I+ ++K E
Sbjct: 272 IVEDWLDKYE 281
>gi|308071529|ref|YP_003873134.1| ATP-dependent RNA helicase dbpA [Paenibacillus polymyxa E681]
gi|305860808|gb|ADM72596.1| ATP-dependent RNA helicase dbpA [Paenibacillus polymyxa E681]
Length = 481
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + + E I+RAL G++TPT+IQ+ V+P AL +KD+V ++TGSGKT A+GIPI
Sbjct: 5 HFTDYALSEEIVRALSSLGYETPTEIQTEVIPVAL-EKKDLVAKSQTGSGKTAAYGIPIC 63
>gi|405980982|ref|ZP_11039311.1| hypothetical protein HMPREF9240_00317 [Actinomyces neuii
BVS029A5]
gi|404393001|gb|EJZ88058.1| hypothetical protein HMPREF9240_00317 [Actinomyces neuii
BVS029A5]
Length = 576
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ ++P ++ A+ + GF+ PT IQ +P ALLA++D+VG A+TG+GKT AFG+P+L
Sbjct: 6 FADLSLPSYLLEAVQKLGFENPTPIQEAAIP-ALLAKQDVVGIAQTGTGKTAAFGLPLLA 64
Query: 64 GI 65
+
Sbjct: 65 HV 66
>gi|340751823|ref|ZP_08688633.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
gi|229420786|gb|EEO35833.1| ATP-dependent RNA helicase [Fusobacterium mortiferum ATCC 9817]
Length = 545
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ + + E ++AL +KG++ PT IQ++ +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 4 LEQFRELGLSEKTLKALAKKGYEQPTPIQALTIPALLNGDKDIIGQAQTGTGKTAAFSLP 63
Query: 61 IL 62
IL
Sbjct: 64 IL 65
>gi|73667695|ref|YP_303710.1| ATP-dependent RNA helicase [Methanosarcina barkeri str. Fusaro]
gi|72394857|gb|AAZ69130.1| ATP-dependent RNA helicase [Methanosarcina barkeri str. Fusaro]
Length = 579
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 26/158 (16%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A++ + +++++AL +KGF+ PT IQ V+P L DI+G A+TG+GKT AFG P
Sbjct: 4 LAKFKALGLSDSMLKALKKKGFEEPTPIQEKVIPLFLKGECDIIGQAQTGTGKTTAFGAP 63
Query: 61 ILTGIVNK-------LENPTEE------DENDSARKD----IV----GAAETGSGKTLAF 99
I+ I K + PT E +E +S + D IV G + T + L
Sbjct: 64 IIEKIPEKSGKVQAIVLTPTRELAIQVSEELNSLKGDKKLHIVPIYGGQSMTQQFRMLKS 123
Query: 100 GIPILTG----IVNKLENPTEEDENDSGLE-EEAEEVL 132
G+ I+ G +++ LE + EN + +EA+E+L
Sbjct: 124 GVDIVVGTPGRVIDHLERKSLNLENIAYFVLDEADEML 161
>gi|121700981|ref|XP_001268755.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
gi|142982514|sp|A1CNV8.1|DRS1_ASPCL RecName: Full=ATP-dependent RNA helicase drs1
gi|119396898|gb|EAW07329.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus clavatus
NRRL 1]
Length = 826
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F TPT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 311 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 365
>gi|443922203|gb|ELU41680.1| ATP-dependent RNA helicase drs1 [Rhizoctonia solani AG-1 IA]
Length = 1126
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ N+ ++RAL GF +PT IQ+ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 188 FTSMNLSRPLLRALTSAGFNSPTPIQAATIPVALLG-KDVVGGAVTGSGKTAAFIIPIL 245
>gi|365875010|ref|ZP_09414540.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis Ag1]
gi|442589346|ref|ZP_21008154.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis R26]
gi|365757122|gb|EHM99031.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis Ag1]
gi|442560956|gb|ELR78183.1| ATP-dependent RNA helicase RhlE [Elizabethkingia anophelis R26]
Length = 424
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 70
E I +AL ++G+KTPT IQ +P +LA KD++G A+TG+GKT AF IPIL + + E
Sbjct: 10 EPISKALQEEGYKTPTSIQEQAIPK-ILAGKDLLGCAQTGTGKTAAFAIPILQLLTERSE 68
Query: 71 N 71
N
Sbjct: 69 N 69
>gi|363892772|ref|ZP_09319927.1| hypothetical protein HMPREF9630_02004 [Eubacteriaceae bacterium
CM2]
gi|402837161|ref|ZP_10885688.1| DEAD/DEAH box helicase [Eubacteriaceae bacterium OBRC8]
gi|361962765|gb|EHL15873.1| hypothetical protein HMPREF9630_02004 [Eubacteriaceae bacterium
CM2]
gi|402275576|gb|EJU24723.1| DEAD/DEAH box helicase [Eubacteriaceae bacterium OBRC8]
Length = 507
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
I E I+RA+ GF++ T+IQ ++P AL +KD++G ++TG+GKT+AFGIPI+ I
Sbjct: 9 INENILRAIDDMGFESMTQIQEQIIPIAL-EKKDVIGQSQTGTGKTVAFGIPIIENI 64
>gi|153809380|ref|ZP_01962048.1| hypothetical protein BACCAC_03694 [Bacteroides caccae ATCC 43185]
gi|423221053|ref|ZP_17207547.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
gi|149127966|gb|EDM19188.1| DEAD/DEAH box helicase [Bacteroides caccae ATCC 43185]
gi|392622292|gb|EIY16424.1| hypothetical protein HMPREF1061_04320 [Bacteroides caccae
CL03T12C61]
Length = 375
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI E I++A+ +KG+ PT IQ +P+AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 6 LNITEPILKAIKEKGYTVPTPIQEKAIPAAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|260802690|ref|XP_002596225.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
gi|229281479|gb|EEN52237.1| hypothetical protein BRAFLDRAFT_276047 [Branchiostoma floridae]
Length = 924
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
WV+ + + ++ L + GF+ PT IQ+ +P +++ +D++G A+TGSGKTLAF IP+
Sbjct: 238 HWVQSGVSKKVLACLKKHGFEKPTPIQAQAIP-VIMSGRDMIGIAKTGSGKTLAFLIPMF 296
Query: 63 TGIVNKLENPTEEDE 77
I++ + P E+ E
Sbjct: 297 RHILD--QRPLEDTE 309
>gi|385302229|gb|EIF46371.1| atp-dependent rna helicase dbp7 (dead-box protein 7) [Dekkera
bruxellensis AWRI1499]
Length = 419
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 AEWVKFNIPETIIRALYQK-GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
A++ K I +T+ R L QK G+ PTKIQ V+P+ + D+ A+TGSGKTLAF +P
Sbjct: 90 ADFAKLGIXKTLCRCLEQKLGYAKPTKIQRAVIPALITGDDDMFVQAQTGSGKTLAFSVP 149
Query: 61 IL 62
I+
Sbjct: 150 II 151
>gi|423137936|ref|ZP_17125579.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
gi|371958886|gb|EHO76587.1| hypothetical protein HMPREF9942_01717 [Fusobacterium nucleatum
subsp. animalis F0419]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|402574642|ref|YP_006623985.1| DNA/RNA helicase [Desulfosporosinus meridiei DSM 13257]
gi|402255839|gb|AFQ46114.1| DNA/RNA helicase, superfamily II [Desulfosporosinus meridiei DSM
13257]
Length = 500
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + N+ E ++R++ GF+ T IQ +PSA+ KD++G A+TG+GKT A+GIP
Sbjct: 1 MATFTDLNLSELVMRSIINMGFEETTPIQEQTIPSAMEG-KDLIGQAQTGTGKTAAYGIP 59
Query: 61 ILTGIVNKLEN 71
++ I+ + EN
Sbjct: 60 LVERIMGQSEN 70
>gi|417749907|ref|ZP_12398289.1| DNA/RNA helicase, superfamily II [Mycobacterium avium subsp.
paratuberculosis S397]
gi|336458594|gb|EGO37561.1| DNA/RNA helicase, superfamily II [Mycobacterium avium subsp.
paratuberculosis S397]
Length = 566
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G++TPT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAIADVGYETPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|304413657|ref|ZP_07395101.1| ATP-dependent RNA helicase [Candidatus Regiella insecticola LSR1]
gi|304283748|gb|EFL92142.1| ATP-dependent RNA helicase [Candidatus Regiella insecticola LSR1]
Length = 449
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +F++ + +I+AL KG++ PT IQ+M +P+A+ R D++G+A TG+GKT AF +PIL
Sbjct: 5 HFSEFDLNDRLIKALNDKGYQRPTAIQAMAIPAAMEGR-DLLGSAPTGTGKTAAFLLPIL 63
Query: 63 TGIVN 67
+++
Sbjct: 64 QHLLD 68
>gi|118462257|ref|YP_880643.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium avium 104]
gi|118163544|gb|ABK64441.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium avium 104]
Length = 566
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G++TPT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAIADVGYETPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|433653854|ref|YP_007297562.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292043|gb|AGB17865.1| DNA/RNA helicase, superfamily II [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 514
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + N+ E I++A+ GF+ P+KIQS V+P LL D++G AETG+GKTLA+G PI+
Sbjct: 2 DFKELNLNEKILKAIDDMGFEEPSKIQSEVIP-VLLEGSDVIGQAETGTGKTLAYGAPII 60
Query: 63 TGI 65
Sbjct: 61 NSF 63
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV+ + +++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 209 MRSWVESKLSPELLKAVERAGYKTPSPIQMAAIPLGLQQR-DVIGIAETGSGKTAAFVLP 267
Query: 61 ILTGIVNKLENPTEEDE 77
+LT +++L +EE+E
Sbjct: 268 MLT-YISRLPPISEENE 283
>gi|88704236|ref|ZP_01101950.1| ATP-dependent RNA helicase DEAD/DEAH box [Congregibacter
litoralis KT71]
gi|88701287|gb|EAQ98392.1| ATP-dependent RNA helicase DEAD/DEAH box [Congregibacter
litoralis KT71]
Length = 604
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P +++AL G++TP+ IQ+M +P LL KD+VG A+TG+GKT AF +PIL +
Sbjct: 13 LQLPVFLMKALSDVGYETPSAIQTMTIPP-LLEGKDLVGQAQTGTGKTAAFALPILARLD 71
Query: 67 NKLENP 72
KL P
Sbjct: 72 AKLAKP 77
>gi|41408619|ref|NP_961455.1| DeaD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|440777955|ref|ZP_20956733.1| DeaD [Mycobacterium avium subsp. paratuberculosis S5]
gi|41396977|gb|AAS04838.1| DeaD [Mycobacterium avium subsp. paratuberculosis K-10]
gi|436721715|gb|ELP45806.1| DeaD [Mycobacterium avium subsp. paratuberculosis S5]
Length = 566
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G++TPT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAIADVGYETPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|336419231|ref|ZP_08599497.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
sp. 11_3_2]
gi|336163922|gb|EGN66836.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
sp. 11_3_2]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|288554498|ref|YP_003426433.1| ATP-dependent RNA helicase [Bacillus pseudofirmus OF4]
gi|288545658|gb|ADC49541.1| ATP-dependent RNA helicase [Bacillus pseudofirmus OF4]
Length = 502
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + +F + ++RA+ Q GF+ T IQ+ +P+AL KDI+G A+TG+GKT AFG+P
Sbjct: 1 MATFYEFGLNSEVVRAVTQMGFEEATPIQAATIPTALEG-KDIIGQAQTGTGKTGAFGVP 59
Query: 61 ILTGI 65
++ I
Sbjct: 60 LIDRI 64
>gi|289766283|ref|ZP_06525661.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
gi|289717838|gb|EFD81850.1| ATP-dependent RNA helicase [Fusobacterium sp. D11]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|401408835|ref|XP_003883866.1| hypothetical protein NCLIV_036150 [Neospora caninum Liverpool]
gi|325118283|emb|CBZ53834.1| hypothetical protein NCLIV_036150 [Neospora caninum Liverpool]
Length = 956
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 85/175 (48%), Gaps = 25/175 (14%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP 72
++RAL F +PT IQ V+ +AL RKDIVGA+ETGSGKTLA+G+PI + N L
Sbjct: 237 VLRALQDCRFFSPTPIQRAVLLAALRDRKDIVGASETGSGKTLAYGVPI---VCNLLAQA 293
Query: 73 TEEDENDSARKDIVGAAETGSGKTL-AFGIPI------LTGIVNKLENPTEEDENDSGLE 125
+E + K+ + + + + AF + + G + E D S +
Sbjct: 294 LRRNEKEIEHKNKTKSLKKRKKQRVDAFSVALSQDDGDAVGSSSLTEEEAAVDAWPSSSD 353
Query: 126 EEAEEVLEELEEESANTTEFV----------KKTRNKL---YALILAPTRELAIQ 167
E+AE EE ++ +T+ K K+ LI+ P+RELA+Q
Sbjct: 354 EDAEH--EEAPNQNDDTSSPAMDGGRSSGGPKSVGGKVGGPECLIVVPSRELALQ 406
>gi|260495553|ref|ZP_05815678.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
gi|260196895|gb|EEW94417.1| ATP-dependent RNA helicase [Fusobacterium sp. 3_1_33]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|421745076|ref|ZP_16182944.1| DNA/RNA helicase, superfamily II, partial [Streptomyces sp. SM8]
gi|406686509|gb|EKC90662.1| DNA/RNA helicase, superfamily II, partial [Streptomyces sp. SM8]
Length = 569
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE ++R L Q G P IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 77 FASLGLPEGVVRKLAQNGVTKPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLLA 135
Query: 64 GI 65
+
Sbjct: 136 SL 137
>gi|237743040|ref|ZP_04573521.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
gi|229433600|gb|EEO43812.1| ATP-dependent RNA helicase [Fusobacterium sp. 7_1]
Length = 528
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|226315226|ref|YP_002775122.1| ATP-dependent RNA helicase [Brevibacillus brevis NBRC 100599]
gi|226098176|dbj|BAH46618.1| putative ATP-dependent RNA helicase [Brevibacillus brevis NBRC
100599]
Length = 513
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + F + +I+RAL GF+ T IQ +P AL R D++G A+TG+GKT AFGIP
Sbjct: 1 MATFNDFGLHHSIVRALSNMGFEEATAIQDQTVPVALQGR-DLIGQAQTGTGKTAAFGIP 59
Query: 61 IL 62
++
Sbjct: 60 LI 61
>gi|409201973|ref|ZP_11230176.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas flavipulchra JG1]
Length = 607
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F ++ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLDLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L + ++ P
Sbjct: 60 ALPLLNQVDASVKQP 74
>gi|406985211|gb|EKE06046.1| hypothetical protein ACD_19C00104G0001, partial [uncultured
bacterium]
Length = 141
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARK-DIVGAAETGSGKTLAFGI 59
M E+ F + E I++AL GF TPT+IQ+ +P L +K D G A+TG+GKTLAFGI
Sbjct: 5 MNEFKNFGLSENIMKALDSVGFTTPTEIQAKAIPMLLANKKQDFHGQAQTGTGKTLAFGI 64
Query: 60 PIL 62
P++
Sbjct: 65 PLI 67
>gi|392595702|gb|EIW85025.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coniophora
puteana RWD-64-598 SS2]
Length = 773
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IPE I+ + Q G+K P+ IQ +P L R D++G AETGSGKT AF IP
Sbjct: 322 LRSWAESEIPEIILGVIEQVGYKEPSPIQRQAIPIGLQNR-DVIGIAETGSGKTAAFVIP 380
Query: 61 ILTGI 65
+LT I
Sbjct: 381 MLTFI 385
>gi|359150602|ref|ZP_09183433.1| ATP-dependent RNA helicase, partial [Streptomyces sp. S4]
Length = 599
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE ++R L Q G P IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 77 FASLGLPEGVVRKLAQNGVTKPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLLA 135
Query: 64 GI 65
+
Sbjct: 136 SL 137
>gi|58270130|ref|XP_572221.1| ATP dependent RNA helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|338818274|sp|P0CQ90.1|MAK5_CRYNJ RecName: Full=ATP-dependent RNA helicase MAK5
gi|57228479|gb|AAW44914.1| ATP dependent RNA helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 772
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW ++ ++ R+ F PT IQS +P+ + R D+VG AETGSGKTLA+ +P
Sbjct: 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYSLP 229
Query: 61 ILTGIVNK 68
IL ++ +
Sbjct: 230 ILHYLLGQ 237
>gi|392544413|ref|ZP_10291550.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas piscicida JCM 20779]
Length = 607
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F ++ I++A+ + G+KTP++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLDLSPAILKAVEELGYKTPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L + ++ P
Sbjct: 60 ALPLLNQVDASVKQP 74
>gi|336399893|ref|ZP_08580692.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
gi|336163533|gb|EGN66456.1| hypothetical protein HMPREF0404_02020 [Fusobacterium sp. 21_1A]
Length = 528
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRDLGLSEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|134117550|ref|XP_772546.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818273|sp|P0CQ91.1|MAK5_CRYNB RecName: Full=ATP-dependent RNA helicase MAK5
gi|50255161|gb|EAL17899.1| hypothetical protein CNBL0260 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 772
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW ++ ++ R+ F PT IQS +P+ + R D+VG AETGSGKTLA+ +P
Sbjct: 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYSLP 229
Query: 61 ILTGIVNK 68
IL ++ +
Sbjct: 230 ILHYLLGQ 237
>gi|346970819|gb|EGY14271.1| ATP-dependent RNA helicase MAK5 [Verticillium dahliae VdLs.17]
Length = 700
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EW+ N+ I + + F PT IQS +P + A D++G A TGSGKTLAFGIP
Sbjct: 136 MSEWMGLNLSPATIATIRRLKFTKPTTIQSTAIPH-IQAGHDVIGKASTGSGKTLAFGIP 194
Query: 61 ILTGIVNK 68
I+ + K
Sbjct: 195 IVDKWLEK 202
>gi|213964614|ref|ZP_03392814.1| cold-shock deAd box protein a [Corynebacterium amycolatum SK46]
gi|213952807|gb|EEB64189.1| cold-shock deAd box protein a [Corynebacterium amycolatum SK46]
Length = 702
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +P+ I+ A+ + GF+TP+ IQ+ +P+ L++ +D+VG A+TG+GKT AF +PIL
Sbjct: 63 FDELELPDDIVNAVRKVGFETPSPIQAATIPT-LMSGRDVVGLAQTGTGKTAAFALPILA 121
Query: 64 GIVNKLENP 72
I + P
Sbjct: 122 RIDRSVRAP 130
>gi|145351197|ref|XP_001419971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580204|gb|ABO98264.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 575
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 1 MAEWVKF-NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
M W + ++P+ I+RA+ Q G++ P+ IQ +P LL R D++G AETGSGKT AF +
Sbjct: 153 MRAWKECTSLPQEILRAIAQVGYEKPSPIQMASIPIGLLKR-DVIGIAETGSGKTCAFVV 211
Query: 60 PILTGIVN 67
P+L I+
Sbjct: 212 PMLAHIMQ 219
>gi|255941704|ref|XP_002561621.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586244|emb|CAP93992.1| Pc16g13220 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 815
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L GF PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 309 FNLSRPILRGLAAVGFTDPTPIQRKAIPVALLG-KDIVGSAVTGSGKTAAFIVPIL 363
>gi|195051805|ref|XP_001993174.1| GH13670 [Drosophila grimshawi]
gi|193900233|gb|EDV99099.1| GH13670 [Drosophila grimshawi]
Length = 518
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + ET+ +A + +K P+KIQ +P AL KD++G AETGSGKT AF +PIL
Sbjct: 59 WKDLGLSETLCKACDELKWKAPSKIQKEAIPVALQG-KDVIGLAETGSGKTGAFALPILH 117
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 118 AL---LENP 123
>gi|430811708|emb|CCJ30841.1| unnamed protein product [Pneumocystis jirovecii]
Length = 610
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + N+ I++AL GF PT IQS +P ALL KDIVG+A TGSGKT AF IP+L
Sbjct: 173 FSQLNLSRPILKALESIGFDKPTTIQSKAIPIALLG-KDIVGSAVTGSGKTAAFVIPVLE 231
Query: 64 GIVNK 68
++ +
Sbjct: 232 RLLYR 236
>gi|357128412|ref|XP_003565867.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Brachypodium distachyon]
Length = 675
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + + E ++RA+ G+ TPT IQ +P L R+D++G A+TGSGKT AF +P
Sbjct: 222 MRTWAESALGEPLLRAVAMAGYATPTPIQMAAVPLGL-RRRDLIGVAQTGSGKTAAFVLP 280
Query: 61 ILTGIVNKLENP 72
+L I+N + +P
Sbjct: 281 MLAYIMNLMTSP 292
>gi|262066543|ref|ZP_06026155.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
gi|291379777|gb|EFE87295.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
periodonticum ATCC 33693]
Length = 528
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E I++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLGEKILKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 IL 62
I+
Sbjct: 67 II 68
>gi|195118551|ref|XP_002003800.1| GI21075 [Drosophila mojavensis]
gi|193914375|gb|EDW13242.1| GI21075 [Drosophila mojavensis]
Length = 515
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + ET+ +A + +K P+KIQ +P AL KDI+G AETGSGKT AF +PIL
Sbjct: 61 WKDLGLNETLCKACEELKWKAPSKIQKEAIPVALQG-KDIIGLAETGSGKTGAFALPILH 119
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 120 AL---LENP 125
>gi|451851184|gb|EMD64485.1| hypothetical protein COCSADRAFT_37068 [Cochliobolus sativus ND90Pr]
Length = 823
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W K ++ E ++ AL + F PT IQ+ +P ++A +D++G A TGSGKTLAFGIP
Sbjct: 251 VSAWGKLDLSEEMLGALAKLKFSKPTNIQTSTIPE-IIAGRDVIGKASTGSGKTLAFGIP 309
Query: 61 IL 62
I+
Sbjct: 310 II 311
>gi|29347295|ref|NP_810798.1| ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339194|gb|AAO76992.1| putative ATP-dependent RNA helicase [Bacteroides thetaiotaomicron
VPI-5482]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + NI E I++A+ +KG+ PT IQ +P AL A+KDI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIEEKGYTVPTPIQEKAIPVAL-AKKDILGCAQTGTGKTASFAIPIIQ 61
Query: 64 GI-VNKLENPTEE 75
+ +NK E E
Sbjct: 62 HLHLNKGEGKRSE 74
>gi|404379274|ref|ZP_10984339.1| hypothetical protein HMPREF9021_01703 [Simonsiella muelleri ATCC
29453]
gi|294482727|gb|EFG30416.1| hypothetical protein HMPREF9021_01703 [Simonsiella muelleri ATCC
29453]
Length = 455
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ N+ + I+ AL G+ +PT IQ +P+AL A KDI+ +A+TGSGKT AF +P L
Sbjct: 4 QFADLNLDKNILSALQSAGYHSPTPIQMQAIPAAL-ADKDIMASAQTGSGKTAAFLLPSL 62
Query: 63 TGIVNKLENP 72
I+ + E P
Sbjct: 63 QKIIKRSEKP 72
>gi|71029534|ref|XP_764410.1| DEAD box RNA helicase [Theileria parva strain Muguga]
gi|68351364|gb|EAN32127.1| DEAD box RNA helicase, putative [Theileria parva]
Length = 543
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP--- 60
W F + +I+RA+ + G++ PT IQS V+P AL KD++ AETGSGKT +F IP
Sbjct: 77 WSDFGLCRSILRAISEMGYQNPTIIQSKVIPLALEG-KDLLVTAETGSGKTASFLIPTLQ 135
Query: 61 --ILTGIVNKLEN 71
+++G++ +L N
Sbjct: 136 RLVVSGVLKQLTN 148
>gi|71006426|ref|XP_757879.1| hypothetical protein UM01732.1 [Ustilago maydis 521]
gi|74703402|sp|Q4PDT1.1|DBP3_USTMA RecName: Full=ATP-dependent RNA helicase DBP3
gi|46097315|gb|EAK82548.1| hypothetical protein UM01732.1 [Ustilago maydis 521]
Length = 585
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
+ + L +GF TPT IQ+ P LL KD+VG AETGSGKT AFG+P L +V K
Sbjct: 170 VKKTLDSQGFSTPTPIQACCWP-VLLQNKDVVGIAETGSGKTFAFGLPALQHLVTK 224
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 27/85 (31%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD+VG AETGSGKT AFG+P L +V K +VL+ ++++
Sbjct: 197 KDVVGIAETGSGKTFAFGLPALQHLVTK------------------HKVLDSGKKKAKGA 238
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
++ L++APTRELAIQ
Sbjct: 239 ---------QVNVLVIAPTRELAIQ 254
>gi|429757621|ref|ZP_19290153.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 181 str. F0379]
gi|429174759|gb|EKY16228.1| DEAD/DEAH box helicase [Actinomyces sp. oral taxon 181 str. F0379]
Length = 564
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F + + I+ AL ++G P IQ++ +P AL R DI+G A+TG+GKTL FGIP+L
Sbjct: 64 FADFGVSDPIVDALEERGITHPFPIQALTLPVAL-DRHDIIGQAKTGTGKTLGFGIPVLE 122
Query: 64 GIV 66
++
Sbjct: 123 DVI 125
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQS +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 375 WVQCGISMKILNSLKKHGYEKPTPIQSQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 433
Query: 64 GIVNK 68
I+++
Sbjct: 434 HIMDQ 438
>gi|66816623|ref|XP_642321.1| hypothetical protein DDB_G0277857 [Dictyostelium discoideum AX4]
gi|74997195|sp|Q54Y81.1|DDX23_DICDI RecName: Full=ATP-dependent RNA helicase ddx23; AltName:
Full=ATP-dependent RNA helicase helB2; AltName:
Full=DEAD box protein 23
gi|60470121|gb|EAL68101.1| hypothetical protein DDB_G0277857 [Dictyostelium discoideum AX4]
Length = 834
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + N+P I+ A+ Q G++ P+ IQ +P +L R DI+G AETGSGKT AF IP+L
Sbjct: 415 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGR-DILGIAETGSGKTCAFVIPMLI 473
Query: 64 GIVN--KLENPTEED 76
I +L TE D
Sbjct: 474 YISKQPRLTKDTEAD 488
>gi|227548399|ref|ZP_03978448.1| superfamily II helicase, partial [Corynebacterium lipophiloflavum
DSM 44291]
gi|227079443|gb|EEI17406.1| superfamily II helicase [Corynebacterium lipophiloflavum DSM 44291]
Length = 683
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ K ++P+++I A+ GF+ P+ IQ+ +P L+ +D+VG A+TG+GKT AF +P+L+
Sbjct: 106 FEKLDLPDSVIAAVKMVGFEQPSPIQAETIP-LLMEGRDVVGLAQTGTGKTAAFALPVLS 164
Query: 64 GIVNKLENP 72
I +L +P
Sbjct: 165 QIDPQLRHP 173
>gi|289550302|ref|YP_003471206.1| cold-shock DEAD-box protein A [Staphylococcus lugdunensis
HKU09-01]
gi|315660238|ref|ZP_07913093.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|385783930|ref|YP_005760103.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|418415253|ref|ZP_12988459.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|418635602|ref|ZP_13197976.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|289179834|gb|ADC87079.1| Cold-shock DEAD-box protein A [Staphylococcus lugdunensis
HKU09-01]
gi|315494665|gb|EFU83005.1| DEAD/DEAH box family ATP-dependent RNA helicase [Staphylococcus
lugdunensis M23590]
gi|339894186|emb|CCB53451.1| putative helicase [Staphylococcus lugdunensis N920143]
gi|374841707|gb|EHS05164.1| DEAD/DEAH box helicase [Staphylococcus lugdunensis VCU139]
gi|410875260|gb|EKS23185.1| hypothetical protein HMPREF9308_01624 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 504
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + I E ++ L GFK PT IQ +P AL R DI+G A+TG+GKT AFGIP
Sbjct: 1 MQNFKDLGISEKTVQTLENMGFKEPTPIQKDSIPYALEGR-DILGQAQTGTGKTGAFGIP 59
Query: 61 ILTGIVNK 68
++ +VNK
Sbjct: 60 LIEKVVNK 67
>gi|400598353|gb|EJP66070.1| ATP-dependent RNA helicase MAK5 [Beauveria bassiana ARSEF 2860]
Length = 799
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +WV N+ + A+ + GF +PT+IQ +P + D++G A+TGSGKTLAFGIP
Sbjct: 188 LKKWVALNLSPATVSAIGKLGFASPTEIQEQTIPH-ITGGADVIGKAQTGSGKTLAFGIP 246
Query: 61 IL 62
I+
Sbjct: 247 IV 248
>gi|443895251|dbj|GAC72597.1| RNA helicase [Pseudozyma antarctica T-34]
Length = 1151
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W +P + + + + G+ +PT IQS +P A+++ +DI+G A+TGSGKT+AF +P
Sbjct: 476 LTKWSHCGLPASCLDVIKRLGYDSPTPIQSQAIP-AIMSGRDIIGVAKTGSGKTMAFLLP 534
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E E
Sbjct: 535 MFRHI--KDQRPVETSE 549
>gi|403342187|gb|EJY70406.1| hypothetical protein OXYTRI_08845 [Oxytricha trifallax]
Length = 1227
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + +P+ ++ + +K F+ P IQ +P A+++ +D++G AETGSGKTLA+ +P
Sbjct: 583 VSSWYQCGLPDGVLEVIERKNFQKPFPIQCQSLP-AIMSGRDVIGIAETGSGKTLAYVLP 641
Query: 61 ILTGIVNKLENPTEEDE 77
++ I + + P EE E
Sbjct: 642 MIRHIRD--QRPLEEGE 656
>gi|448533726|ref|XP_003870686.1| DEAD-box helicase [Candida orthopsilosis Co 90-125]
gi|380355041|emb|CCG24557.1| DEAD-box helicase [Candida orthopsilosis]
Length = 570
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W N+ +++A+ Q GF+ PT IQS +P AL ++DI+ A TGSGKT A+ IP++
Sbjct: 18 WKSLNLDPRLLQAIDQLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPVIQ 77
Query: 64 GIV 66
++
Sbjct: 78 NLL 80
>gi|421526210|ref|ZP_15972819.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
gi|402257969|gb|EJU08442.1| ATP-dependent RNA helicase [Fusobacterium nucleatum ChDC F128]
Length = 529
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 ILTGIVN 67
I+ N
Sbjct: 67 IIENFEN 73
>gi|6473828|dbj|BAA87186.1| Hypothetical nuclear protein [Schizosaccharomyces pombe]
Length = 93
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 70
+T++RA+++KGFK PT IQ +P LL +D+VG A TGSGKT AF IP++ + + L
Sbjct: 4 QTLLRAIFKKGFKAPTPIQRKTIP-LLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLA 62
Query: 71 N 71
N
Sbjct: 63 N 63
>gi|336262101|ref|XP_003345836.1| hypothetical protein SMAC_07120 [Sordaria macrospora k-hell]
gi|380088610|emb|CCC13496.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 807
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EWV ++ +I ++ + F PT IQ+ +P ++A D++G A TGSGKTLAFGIP
Sbjct: 207 MSEWVPLDLSPRMISSIAKLKFTKPTLIQAQAIPQ-IMAGHDVIGKASTGSGKTLAFGIP 265
Query: 61 IL 62
++
Sbjct: 266 LV 267
>gi|295658672|ref|XP_002789896.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282857|gb|EEH38423.1| ATP-dependent RNA helicase MAK5 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 771
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W I + +L + F PT IQS +P + A D+VG A TGSGKTLAFGIP
Sbjct: 192 VSAWEPLGISAELQTSLAKLKFAKPTPIQSACIPE-IAAGHDVVGKASTGSGKTLAFGIP 250
Query: 61 IL-TGIVNKLENPTEEDENDSARKD 84
IL + N + P + +DS+RK+
Sbjct: 251 ILEYHLENNRDEPIQSTGSDSSRKN 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 43/89 (48%), Gaps = 27/89 (30%)
Query: 80 SARKDIVGAAETGSGKTLAFGIPIL-TGIVNKLENPTEEDENDSGLEEEAEEVLEELEEE 138
+A D+VG A TGSGKTLAFGIPIL + N + P + +DS
Sbjct: 228 AAGHDVVGKASTGSGKTLAFGIPILEYHLENNRDEPIQSTGSDS---------------- 271
Query: 139 SANTTEFVKKTRNKLYALILAPTRELAIQ 167
+R ALIL+PTRELA Q
Sbjct: 272 ----------SRKNPIALILSPTRELAHQ 290
>gi|241618030|ref|XP_002408280.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215502947|gb|EEC12441.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1025
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + + ++ L + GF+ PT IQ+ +P A+++ +D++G A+TGSGKTLAF +P+
Sbjct: 351 WAQCGVSKKVMEVLKKHGFEKPTPIQAQAIP-AVMSGRDLIGIAKTGSGKTLAFLLPMFR 409
Query: 64 GIVNKLENPTEEDE 77
I++ + P E+D+
Sbjct: 410 HILD--QPPLEDDD 421
>gi|392404056|ref|YP_006440668.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM
21527]
gi|390612010|gb|AFM13162.1| DEAD/DEAH box helicase domain protein [Turneriella parva DSM
21527]
Length = 424
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+++ KF E I R + + GFK PT IQ +P AL A KDI+G A+TG+GKT AF +P
Sbjct: 1 MSDFEKFGFSEAITRNVTRAGFKAPTPIQKEAIPHAL-AGKDILGLAQTGTGKTAAFVLP 59
Query: 61 IL 62
+L
Sbjct: 60 ML 61
>gi|444315237|ref|XP_004178276.1| hypothetical protein TBLA_0A09740 [Tetrapisispora blattae CBS 6284]
gi|387511315|emb|CCH58757.1| hypothetical protein TBLA_0A09740 [Tetrapisispora blattae CBS 6284]
Length = 617
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F + +++A+ GF PT IQS +P AL ++DI+ A TGSGKTLA+ IP++ I+
Sbjct: 22 FQLDSRLLQAIKGSGFHNPTLIQSHAIPLALQEKRDIIAKAATGSGKTLAYVIPVIQTIL 81
Query: 67 N---KLENPTEEDENDSARKDIV 86
N LEN D DS+ I+
Sbjct: 82 NYKRTLENNQGTDITDSSTLGII 104
>gi|427440715|ref|ZP_18924987.1| DEAD/DEAH box family ATP-dependent RNA helicase [Pediococcus
lolii NGRI 0510Q]
gi|425787422|dbj|GAC45775.1| DEAD/DEAH box family ATP-dependent RNA helicase [Pediococcus
lolii NGRI 0510Q]
Length = 511
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + + E I++A+ G+ PT IQ+ +P +LA KDI+G A+TG+GKT AFG+PIL
Sbjct: 2 KFTELGLEENILKAVLDNGYDEPTPIQAETIPD-VLAGKDIIGQAQTGTGKTAAFGLPIL 60
Query: 63 TGIVNKLENP 72
+ L+NP
Sbjct: 61 QNV--DLDNP 68
>gi|363889902|ref|ZP_09317252.1| hypothetical protein HMPREF9628_01748 [Eubacteriaceae bacterium
CM5]
gi|363894857|ref|ZP_09321912.1| hypothetical protein HMPREF9629_02181 [Eubacteriaceae bacterium
ACC19a]
gi|361961266|gb|EHL14481.1| hypothetical protein HMPREF9629_02181 [Eubacteriaceae bacterium
ACC19a]
gi|361966184|gb|EHL19117.1| hypothetical protein HMPREF9628_01748 [Eubacteriaceae bacterium
CM5]
Length = 507
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
I E I+RA+ GF+ T+IQ ++P AL +KD++G ++TG+GKT+AFGIPI+ I
Sbjct: 9 INENILRAIDDMGFENMTQIQEQIIPIAL-EKKDVIGQSQTGTGKTVAFGIPIIENI 64
>gi|345008256|ref|YP_004810610.1| DEAD/DEAH box helicase [Streptomyces violaceusniger Tu 4113]
gi|344034605|gb|AEM80330.1| DEAD/DEAH box helicase domain protein [Streptomyces violaceusniger
Tu 4113]
Length = 735
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE I+R L Q G TP IQ+ +P A+ A KDI+G TGSGKTL+FG+P+LT
Sbjct: 65 FADLGLPEQIVRKLAQNGVTTPFPIQAATIPDAM-AGKDILGRGRTGSGKTLSFGLPLLT 123
>gi|383828476|ref|ZP_09983565.1| DNA/RNA helicase, superfamily II [Saccharomonospora xinjiangensis
XJ-54]
gi|383461129|gb|EID53219.1| DNA/RNA helicase, superfamily II [Saccharomonospora xinjiangensis
XJ-54]
Length = 442
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ N+PE + RAL + G + P IQ+ +P AL R D++G A+TGSGKTLAFG+ +L+
Sbjct: 17 FADLNLPEPLHRALQKAGMEAPFPIQAATLPDALAGR-DVLGRAQTGSGKTLAFGLALLS 75
>gi|375311376|ref|ZP_09776631.1| ATP-dependent RNA helicase dbpA [Paenibacillus sp. Aloe-11]
gi|375076556|gb|EHS54809.1| ATP-dependent RNA helicase dbpA [Paenibacillus sp. Aloe-11]
Length = 481
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + + E I+RAL G++TPTK+Q+ V+P AL+ +KD+V ++TGSGKT A+GIP+
Sbjct: 5 HFTDYPLSEEIVRALNSLGYETPTKVQTEVIPVALV-KKDLVVKSQTGSGKTAAYGIPLC 63
>gi|383113927|ref|ZP_09934694.1| hypothetical protein BSGG_4721 [Bacteroides sp. D2]
gi|313697186|gb|EFS34021.1| hypothetical protein BSGG_4721 [Bacteroides sp. D2]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P+AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIEEKGYAVPTPIQGEAIPAAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|326928709|ref|XP_003210518.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Meleagris gallopavo]
Length = 1027
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ AL + G++ PT IQS +P A++ +D++G A+TGSGKT+AF +P+
Sbjct: 370 WVQCGISMKILTALKKHGYEKPTPIQSQAIP-AIMNGRDLIGIAKTGSGKTIAFLLPMFR 428
Query: 64 GIVNK 68
I+++
Sbjct: 429 HIMDQ 433
>gi|160883549|ref|ZP_02064552.1| hypothetical protein BACOVA_01521 [Bacteroides ovatus ATCC 8483]
gi|237722794|ref|ZP_04553275.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|293371813|ref|ZP_06618223.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|299147643|ref|ZP_07040707.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|336416998|ref|ZP_08597329.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|423291591|ref|ZP_17270438.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
gi|156110962|gb|EDO12707.1| DEAD/DEAH box helicase [Bacteroides ovatus ATCC 8483]
gi|229447316|gb|EEO53107.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|292633265|gb|EFF51836.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CMC 3f]
gi|298514430|gb|EFI38315.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 3_1_23]
gi|335937042|gb|EGM98952.1| hypothetical protein HMPREF1017_04437 [Bacteroides ovatus
3_8_47FAA]
gi|392662714|gb|EIY56270.1| hypothetical protein HMPREF1069_05481 [Bacteroides ovatus
CL02T12C04]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P+AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIEEKGYAVPTPIQGEAIPAAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|390454552|ref|ZP_10240080.1| ATP-dependent RNA helicase dbpA [Paenibacillus peoriae KCTC 3763]
Length = 481
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + + E I+RAL G++TPTK+Q+ V+P AL+ +KD+V ++TGSGKT A+GIP+
Sbjct: 5 HFTDYPLSEEIVRALNSLGYETPTKVQTEVIPVALV-KKDLVVKSQTGSGKTAAYGIPLC 63
>gi|296136685|ref|YP_003643927.1| DEAD/DEAH box helicase [Thiomonas intermedia K12]
gi|295796807|gb|ADG31597.1| DEAD/DEAH box helicase domain protein [Thiomonas intermedia K12]
Length = 666
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ + + +PE +++AL G++TP+ IQ+ +P LLA +D++G A+TG+GKT AF +P
Sbjct: 6 ISPFAELGLPEPLLQALRDVGYETPSPIQAATIPP-LLAGRDVLGQAQTGTGKTAAFALP 64
Query: 61 ILTGI 65
IL I
Sbjct: 65 ILAKI 69
>gi|183984161|ref|YP_001852452.1| cold-shock DEAD-box protein, DeaD [Mycobacterium marinum M]
gi|443492292|ref|YP_007370439.1| cold-shock DEAD-box protein, DeaD [Mycobacterium liflandii
128FXT]
gi|183177487|gb|ACC42597.1| cold-shock DEAD-Box protein, DeaD [Mycobacterium marinum M]
gi|442584789|gb|AGC63932.1| cold-shock DEAD-box protein, DeaD [Mycobacterium liflandii
128FXT]
Length = 571
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + I +++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IPI
Sbjct: 13 ATFADLQIHPSVMRAIADVGYESPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPI 71
Query: 62 LTGI 65
L+ I
Sbjct: 72 LSKI 75
>gi|70954064|ref|XP_746097.1| RNA helicase [Plasmodium chabaudi chabaudi]
gi|56526610|emb|CAH77382.1| RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 643
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ NIP +I+++LY F +P +IQS + ++ +KDI+ ++TG+GKTL F +PILT I
Sbjct: 91 ELNIPHSIMKSLYDHNFFSPREIQSKTLEHSINGKKDIIVVSKTGTGKTLTFCLPILTNI 150
Query: 66 V-NKLE 70
+ NKL+
Sbjct: 151 LQNKLK 156
>gi|310800598|gb|EFQ35491.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 777
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M WV + ++ A+ + F PT IQS +P +LA D++G A TGSGKTLAF IP
Sbjct: 204 MTPWVDLGLSPALVAAIAKLKFAKPTNIQSSTIPD-ILAGHDVIGKASTGSGKTLAFSIP 262
Query: 61 ILTGIVNKLE 70
I+ V+K +
Sbjct: 263 IVEEWVDKHD 272
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 380 WKEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 438
Query: 64 GI 65
I
Sbjct: 439 WI 440
>gi|423298414|ref|ZP_17276472.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
gi|392663326|gb|EIY56877.1| hypothetical protein HMPREF1070_05137 [Bacteroides ovatus
CL03T12C18]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P+AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIEEKGYAVPTPIQGEAIPAAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|58263430|ref|XP_569125.1| pre-mRNA splicing factor [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108386|ref|XP_777144.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819236|sp|P0CQ99.1|PRP5_CRYNB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|338819237|sp|P0CQ98.1|PRP5_CRYNJ RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|50259829|gb|EAL22497.1| hypothetical protein CNBB3750 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223775|gb|AAW41818.1| pre-mRNA splicing factor, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1072
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P+ + + +G++TPT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+L
Sbjct: 405 WGAFGLPQGCLDVIKHQGWETPTSIQAQAIP-AIMSGRDVIGIAKTGSGKTVAFLLPMLR 463
Query: 64 GIVNK 68
+ ++
Sbjct: 464 HVRDQ 468
>gi|402081834|gb|EJT76979.1| ATP-dependent RNA helicase MAK5 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 760
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M++WV ++ ++ ++ + F PT IQ+ +P +LA D++G A TGSGKTLAFGIP
Sbjct: 193 MSQWVPLDLSGEMLSSIARLKFSKPTAIQAQAIPE-ILAGHDVIGKASTGSGKTLAFGIP 251
Query: 61 IL 62
I+
Sbjct: 252 IV 253
>gi|363739175|ref|XP_414629.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Gallus
gallus]
Length = 1028
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ AL + G++ PT IQS +P A++ +D++G A+TGSGKT+AF +P+
Sbjct: 371 WVQCGISMKILTALKKHGYEKPTPIQSQAIP-AIMNGRDLIGIAKTGSGKTIAFLLPMFR 429
Query: 64 GIVNK 68
I+++
Sbjct: 430 HIMDQ 434
>gi|376290134|ref|YP_005162381.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae C7 (beta)]
gi|372103530|gb|AEX67127.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae C7 (beta)]
Length = 682
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+PE I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPEAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|329956784|ref|ZP_08297353.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
gi|328523823|gb|EGF50910.1| ATP-dependent RNA helicase RhlE [Bacteroides clarus YIT 12056]
Length = 372
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 48/75 (64%), Gaps = 5/75 (6%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
NI E I++A+ +KG+ +PT IQ +P+AL KDI+G A+TG+GKT AF IP I+
Sbjct: 6 LNITEPILKAIEEKGYTSPTPIQVKAIPAALTG-KDILGCAQTGTGKTAAFAIP----II 60
Query: 67 NKLENPTEEDENDSA 81
L+ E D++ A
Sbjct: 61 QHLQAGKERDKSIKA 75
>gi|302890093|ref|XP_003043931.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
gi|256724850|gb|EEU38218.1| hypothetical protein NECHADRAFT_99434 [Nectria haematococca mpVI
77-13-4]
Length = 760
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A WV N+ I+ A+ + GF PT IQ +P +++ +D++G A+TGSGKTLAFGIP+
Sbjct: 194 AAWVPLNLSPQILSAIAKLGFTKPTLIQEKTIPE-IVSGEDVIGKAQTGSGKTLAFGIPM 252
Query: 62 L 62
+
Sbjct: 253 V 253
>gi|298385203|ref|ZP_06994762.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
gi|383122089|ref|ZP_09942788.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|251837561|gb|EES65653.1| hypothetical protein BSIG_5243 [Bacteroides sp. 1_1_6]
gi|298262347|gb|EFI05212.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. 1_1_14]
Length = 374
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL A+KDI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIEEKGYTVPTPIQEKAIPVAL-AKKDILGCAQTGTGKTASFAIPII 60
>gi|242009038|ref|XP_002425300.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212509065|gb|EEB12562.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 1014
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW + + + ++ L + GF+ PT IQ+ +P A+++ +D++G A+TGSGKTLAF +P
Sbjct: 347 IKEWAQCGVSKKVLEILKKNGFEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTLAFLLP 405
Query: 61 ILTGIVNK 68
+ I+++
Sbjct: 406 MFRHILDQ 413
>gi|407984605|ref|ZP_11165216.1| DEAD/DEAH box helicase family protein [Mycobacterium hassiacum
DSM 44199]
gi|407373827|gb|EKF22832.1| DEAD/DEAH box helicase family protein [Mycobacterium hassiacum
DSM 44199]
Length = 560
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ IP ++RA+ G++TP+ IQ+ +P L+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIPPAVLRAVEDVGYETPSAIQAATIPP-LMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|418063902|ref|ZP_12701506.1| DEAD/DEAH box helicase domain protein, partial [Methylobacterium
extorquens DSM 13060]
gi|373556194|gb|EHP82728.1| DEAD/DEAH box helicase domain protein, partial [Methylobacterium
extorquens DSM 13060]
Length = 417
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ F + + ++RAL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFTDFGLAQPVLRALEEAGYVTPTPIQAQAVPPAMEGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|302915827|ref|XP_003051724.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732663|gb|EEU46011.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 714
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + N+P ++ + Q G+K PT IQ +P AL AR D++G A TGSGKT AF +P
Sbjct: 277 MRNWRESNLPPRLLSVVDQVGYKEPTPIQRAAIPIALQAR-DLIGVAVTGSGKTAAFLLP 335
Query: 61 ILTGIVNKLENPTEEDEN 78
+L I + P ED N
Sbjct: 336 LLVYISDL---PPLEDHN 350
>gi|392396642|ref|YP_006433243.1| DNA/RNA helicase [Flexibacter litoralis DSM 6794]
gi|390527720|gb|AFM03450.1| DNA/RNA helicase, superfamily II [Flexibacter litoralis DSM 6794]
Length = 617
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ N+ + + RA+ GF++P+ IQ+ +P LL KD++G A+TG+GKT AFGIP++
Sbjct: 23 KFTDMNLSDEVKRAVEVMGFESPSPIQAEAIPH-LLEGKDVIGQAQTGTGKTAAFGIPLI 81
Query: 63 TGIVNKLENPTEEDENDSARKDIV 86
I+ EN +E D N K I+
Sbjct: 82 ERIIKANEN-SEFDRNSRLPKGII 104
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 30/85 (35%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD++G A+TG+GKT AFGIP++ I+ EN
Sbjct: 60 KDVIGQAQTGTGKTAAFGIPLIERIIKANEN----------------------------- 90
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
+EF + +R +IL PTRELA+Q
Sbjct: 91 SEFDRNSRLP-KGIILCPTRELAVQ 114
>gi|398308880|ref|ZP_10512354.1| ATP-dependent RNA helicase [Bacillus mojavensis RO-H-1]
Length = 479
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PT++Q V+P+AL RKD+V ++TGSGKT AFGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTEVQRSVIPAAL-ERKDLVVKSQTGSGKTAAFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>gi|321261600|ref|XP_003195519.1| ATP dependent RNA helicase [Cryptococcus gattii WM276]
gi|317461993|gb|ADV23732.1| ATP dependent RNA helicase, putative [Cryptococcus gattii WM276]
Length = 772
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW ++ + R+ F PT IQS +P+ + R D+VG AETGSGKTLA+ +P
Sbjct: 171 LPEWSSISLHPALKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYALP 229
Query: 61 ILTGIVNK 68
IL ++ +
Sbjct: 230 ILHYLLGQ 237
>gi|410694396|ref|YP_003625018.1| Cold-shock DEAD box protein A (ATP-dependent RNA helicase deaD)
[Thiomonas sp. 3As]
gi|294340821|emb|CAZ89216.1| Cold-shock DEAD box protein A (ATP-dependent RNA helicase deaD)
[Thiomonas sp. 3As]
Length = 666
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE +++AL G++TP+ IQ+ +P LLA +D++G A+TG+GKT AF +PIL
Sbjct: 9 FAELGLPEPLLQALRDVGYETPSPIQAATIPP-LLAGRDVLGQAQTGTGKTAAFALPILA 67
Query: 64 GI 65
I
Sbjct: 68 KI 69
>gi|380690627|gb|AFD93382.1| DEAD box ATP-dependent RNA helicase, partial [Cydia pomonella]
Length = 459
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + I+ + + G+K+PT IQ +P L R DI+G AETGSGKTLAF IP+LT
Sbjct: 116 WKEAGFHSDIMDIINKVGYKSPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLT 174
Query: 64 GIVNKLENPTEEDENDSARKDIVGA----AETGSGKTLAFGIPI-LTGIV 108
I + +N ED + I+ A+ +T FG+P+ +T +V
Sbjct: 175 WIQSLPKNERMEDADQGPYAIILAPTRELAQQIEEETNKFGVPLGITSVV 224
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 42/85 (49%), Gaps = 30/85 (35%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
+DI+G AETGSGKTLAF IP+LT I + +N ED D G
Sbjct: 152 RDIIGVAETGSGKTLAFLIPLLTWIQSLPKNERMEDA-DQG------------------- 191
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
YA+ILAPTRELA Q
Sbjct: 192 ----------PYAIILAPTRELAQQ 206
>gi|367005897|ref|XP_003687680.1| hypothetical protein TPHA_0K01120 [Tetrapisispora phaffii CBS
4417]
gi|357525985|emb|CCE65246.1| hypothetical protein TPHA_0K01120 [Tetrapisispora phaffii CBS
4417]
Length = 604
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP 72
+++A+ + G+K PT IQ+ +P AL ++DI+ A TGSGKTLA+ IP++ I++ +N
Sbjct: 28 LLQAIKRNGYKNPTLIQATAIPLALQEKRDIIAKASTGSGKTLAYLIPVIQTILDYQQNK 87
Query: 73 TEE-DENDSA 81
+ D N SA
Sbjct: 88 GNDVDSNSSA 97
>gi|114569901|ref|YP_756581.1| DEAD/DEAH box helicase [Maricaulis maris MCS10]
gi|114340363|gb|ABI65643.1| DEAD/DEAH box helicase domain protein [Maricaulis maris MCS10]
Length = 452
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + E I+RAL +G++TPT IQ V+P A++ +DIVG A+TG+GKT +F +P
Sbjct: 1 MTQFSDLGLAEPILRALNDEGYETPTPIQREVIP-AMIEGRDIVGIAQTGTGKTASFVLP 59
Query: 61 ILTGIV--NKLENP 72
IL ++ N+ +P
Sbjct: 60 ILNRLIEENRPTHP 73
>gi|399927884|ref|ZP_10785242.1| Superfamily II DNA and RNA helicase [Myroides injenensis
M09-0166]
Length = 371
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+I I++A+ + G+ TPT IQ +P +L KDI+G A+TG+GKT AF IPIL G++
Sbjct: 6 LSISSPILQAIQEVGYTTPTAIQVQAIPP-ILQGKDIIGCAQTGTGKTGAFAIPILEGLL 64
Query: 67 NK 68
NK
Sbjct: 65 NK 66
>gi|310779133|ref|YP_003967466.1| DEAD/DEAH box helicase [Ilyobacter polytropus DSM 2926]
gi|309748456|gb|ADO83118.1| DEAD/DEAH box helicase domain protein [Ilyobacter polytropus DSM
2926]
Length = 526
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + E +R L +KGF+ P+ IQ++ +P L KD++G A+TG+GKT AF +P
Sbjct: 4 LKEFKALGLSEKTLRPLLEKGFEKPSPIQALTIPVLLNGDKDVIGQAQTGTGKTAAFSLP 63
Query: 61 ILTGI 65
IL I
Sbjct: 64 ILEKI 68
>gi|194758757|ref|XP_001961625.1| GF15062 [Drosophila ananassae]
gi|190615322|gb|EDV30846.1| GF15062 [Drosophila ananassae]
Length = 819
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 393 WSESGFPREIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 451
Query: 64 GI 65
I
Sbjct: 452 WI 453
>gi|195484183|ref|XP_002090584.1| GE13195 [Drosophila yakuba]
gi|194176685|gb|EDW90296.1| GE13195 [Drosophila yakuba]
Length = 821
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 395 WSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 453
Query: 64 GI 65
I
Sbjct: 454 WI 455
>gi|162148995|ref|YP_001603456.1| cold-shock DEAD box protein A [Gluconacetobacter diazotrophicus
PAl 5]
gi|209545253|ref|YP_002277482.1| DEAD/DEAH box helicase [Gluconacetobacter diazotrophicus PAl 5]
gi|161787572|emb|CAP57168.1| putative cold-shock DEAD box protein A [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532930|gb|ACI52867.1| DEAD/DEAH box helicase domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 423
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + E ++RAL ++G+ TPT IQ+ +P LLA +D++G A+TG+GKT AF +P
Sbjct: 1 MTTFADLQLAEPLLRALNEEGYTTPTPIQAGAIPH-LLAGRDLLGLAQTGTGKTAAFALP 59
Query: 61 ILTGIV--NKLENP 72
IL ++ ++ NP
Sbjct: 60 ILQRLLTHHRRANP 73
>gi|550331|emb|CAA57418.1| putative RNA helicase [Dictyostelium discoideum]
Length = 566
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + N+P I+ A+ Q G++ P+ IQ +P +L R DI+G AETGSGKT AF IP+L
Sbjct: 147 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGR-DILGIAETGSGKTCAFVIPMLI 205
Query: 64 GIVN--KLENPTEED 76
I +L TE D
Sbjct: 206 YISKQPRLTKDTEAD 220
>gi|433458404|ref|ZP_20416331.1| DNA/RNA helicase [Arthrobacter crystallopoietes BAB-32]
gi|432193378|gb|ELK50115.1| DNA/RNA helicase [Arthrobacter crystallopoietes BAB-32]
Length = 559
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F++ I+R+L+ G P IQ+M +P AL + DI+G A+TG+GKTL FGIP L
Sbjct: 43 FADFDVRADIVRSLFDAGITHPFPIQAMTLPVAL-SGHDIIGQAKTGTGKTLGFGIPALQ 101
Query: 64 GIV 66
++
Sbjct: 102 RVI 104
>gi|256825728|ref|YP_003149688.1| DNA/RNA helicase [Kytococcus sedentarius DSM 20547]
gi|256689121|gb|ACV06923.1| DNA/RNA helicase, superfamily II [Kytococcus sedentarius DSM
20547]
Length = 499
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F I I+ AL G P IQSM +P AL R+DI+G A+TG+GKTL FG+P++
Sbjct: 6 FADFGIHPDIVAALEAGGITHPFPIQSMTLPVAL-DRQDIIGQAKTGTGKTLGFGVPMVQ 64
Query: 64 GIV-------NKLENP 72
+V ++LE P
Sbjct: 65 NVVGPNHEGYDQLERP 80
>gi|357495749|ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 666
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ + + I++A+ + G+KTP+ IQ +P L R D++G AETGSGKT AF +P+L+
Sbjct: 250 WVESKLSQEILKAVEKAGYKTPSPIQMASIPLGLQQR-DVIGVAETGSGKTAAFVLPMLS 308
Query: 64 GIVNKLENPTEEDE 77
I +L +EE+E
Sbjct: 309 YIT-RLPPISEENE 321
>gi|444337104|ref|ZP_21151128.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|443547573|gb|ELT57044.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 617
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FMDLGLPEFILNAVSDLGFQTPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|392550603|ref|ZP_10297740.1| ATP-dependent RNA helicase CsdA [Pseudoalteromonas spongiae
UST010723-006]
Length = 600
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
N+P I+ A+ + GF PT IQ +P ALLA KD++G A+TG+GKT AFG+P+L +
Sbjct: 11 LNLPTPILSAITELGFVEPTPIQQQSIP-ALLAGKDVLGEAQTGTGKTAAFGLPLLARLD 69
Query: 67 NKLENP 72
L P
Sbjct: 70 ANLNAP 75
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A++ +D++G A+TGSGKT+AF +P+
Sbjct: 372 WVQCGISMKILNSLKKHGYEKPTPIQAQAIP-AIMNGRDLIGIAKTGSGKTIAFLLPMFR 430
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 431 HIMD--QRPLEEGE 442
>gi|300779124|ref|ZP_07088982.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC
35910]
gi|300504634|gb|EFK35774.1| ATP-dependent RNA helicase RhlE [Chryseobacterium gleum ATCC
35910]
Length = 373
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + N+ IIRA+ + G+ PT+IQ +P +LA KDI+G A+TG+GKT AF +P
Sbjct: 1 MMSFKSLNLINAIIRAVTEAGYSKPTEIQYTAIPH-ILAGKDIIGCAQTGTGKTAAFAMP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|321252102|ref|XP_003192288.1| pre-mRNA splicing factor [Cryptococcus gattii WM276]
gi|317458756|gb|ADV20501.1| pre-mRNA splicing factor, putative [Cryptococcus gattii WM276]
Length = 1063
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P+ + + +G++TPT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+L
Sbjct: 396 WGAFGLPQGCLDVIKHQGWETPTSIQAQAIP-AIMSGRDVIGIAKTGSGKTVAFLLPMLR 454
Query: 64 GIVNK 68
+ ++
Sbjct: 455 HVRDQ 459
>gi|281204092|gb|EFA78288.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 443
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
K + I+ A + GFK PT+IQ +P AL A KDIVG A+TGSGKT AF IP+L +
Sbjct: 17 KLGVDPQIVEACKKLGFKNPTEIQRKAIPEAL-AGKDIVGLAQTGSGKTAAFSIPMLQAL 75
Query: 66 VNK 68
+ K
Sbjct: 76 LAK 78
>gi|365966468|ref|YP_004948030.1| cold-shock deAd box protein a [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|365745381|gb|AEW76286.1| cold-shock deAd box protein a [Aggregatibacter
actinomycetemcomitans ANH9381]
Length = 595
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 3 FMDLGLPEFILNAVSDLGFQTPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 61
Query: 64 GI 65
I
Sbjct: 62 KI 63
>gi|304385542|ref|ZP_07367886.1| DEAD/DEAH box family ATP-dependent RNA helicase [Pediococcus
acidilactici DSM 20284]
gi|418069818|ref|ZP_12707095.1| superfamily II DNA/RNA helicase [Pediococcus acidilactici
MA18/5M]
gi|304328046|gb|EFL95268.1| DEAD/DEAH box family ATP-dependent RNA helicase [Pediococcus
acidilactici DSM 20284]
gi|357536349|gb|EHJ20380.1| superfamily II DNA/RNA helicase [Pediococcus acidilactici
MA18/5M]
Length = 511
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + + E I++A+ G+ PT IQ+ +P +LA KDI+G A+TG+GKT AFG+PIL
Sbjct: 2 KFTELGLEEDILKAVLDNGYDEPTPIQAETIPD-VLAGKDIIGQAQTGTGKTAAFGLPIL 60
Query: 63 TGIVNKLENP 72
+ L+NP
Sbjct: 61 QNV--DLDNP 68
>gi|255080620|ref|XP_002503883.1| predicted protein [Micromonas sp. RCC299]
gi|226519150|gb|ACO65141.1| predicted protein [Micromonas sp. RCC299]
Length = 754
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + +PE + RA+ + G+ P+ IQ +P LL R D++G AETGSGKT AF +P
Sbjct: 321 MRSWEESTMPEQVKRAIQKVGYAKPSPIQMASIPIGLLKR-DVIGIAETGSGKTCAFVVP 379
Query: 61 ILTGI 65
+L I
Sbjct: 380 MLAYI 384
>gi|405118430|gb|AFR93204.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Cryptococcus
neoformans var. grubii H99]
Length = 1071
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P+ + + +G++TPT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+L
Sbjct: 404 WGAFGLPQGCLDVIKHQGWETPTSIQAQAIP-AIMSGRDVIGIAKTGSGKTVAFLLPMLR 462
Query: 64 GIVNK 68
+ ++
Sbjct: 463 HVRDQ 467
>gi|302525261|ref|ZP_07277603.1| ATP-dependent RNA helicase [Streptomyces sp. AA4]
gi|302434156|gb|EFL05972.1| ATP-dependent RNA helicase [Streptomyces sp. AA4]
Length = 613
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + +PE ++RAL + G P IQS +P AL R D++G A+TGSGKTLAFG+ IL
Sbjct: 83 FAQLGLPEPLLRALAEAGIDAPFPIQSATIPDALAGR-DVLGRAQTGSGKTLAFGLAIL 140
>gi|427793119|gb|JAA62011.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1147
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + + ++ L + GF+ PT IQ+ +P A+++ +D++G A+TGSGKTLAF +P+
Sbjct: 419 WAQCGVSKKVLELLKKHGFEKPTPIQAQAIP-AVMSGRDLIGIAKTGSGKTLAFLLPMFR 477
Query: 64 GIVNKLENPTEEDE 77
I++ + P E+D+
Sbjct: 478 HILD--QPPLEDDD 489
>gi|448104053|ref|XP_004200189.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
gi|359381611|emb|CCE82070.1| Piso0_002766 [Millerozyma farinosa CBS 7064]
Length = 900
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 48/69 (69%), Gaps = 2/69 (2%)
Query: 1 MAEWVKFNIPETIIRALYQK-GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+++W +P +I+ L +K G+ +P+ IQS +P A++ +DI+G A+TGSGKTL+F +
Sbjct: 302 ISKWSHLGLPNSIMTILKEKLGYTSPSPIQSQALP-AIMKGRDIIGVAKTGSGKTLSFSL 360
Query: 60 PILTGIVNK 68
P+L + ++
Sbjct: 361 PLLRHVQDQ 369
>gi|219118375|ref|XP_002179962.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408219|gb|EEC48153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 948
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP 72
I AL + F TPT IQ+ +P+A+L R+++VGAA TGSGKTLAF +P+ ++ K E+
Sbjct: 248 ICEALVLQSFWTPTPIQAATLPAAILGRRNVVGAAPTGSGKTLAFLLPVAQFLLQKQES- 306
Query: 73 TEEDENDSARKD 84
ND A KD
Sbjct: 307 --MHINDEATKD 316
>gi|308800454|ref|XP_003075008.1| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
gi|119358858|emb|CAL52279.2| Ddx49 Ddx49-related DEAD box helicase superfamily II protein (IC)
[Ostreococcus tauri]
Length = 419
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 19/165 (11%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + + + +++ L + F++P+ +QS +P +LA KD++G A TGSGKT AF +P
Sbjct: 1 MATFDELGLCNVVLKILKRVHFRSPSDVQSTCIPQ-ILAGKDVIGIANTGSGKTAAFALP 59
Query: 61 IL-------TGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLEN 113
I+ GI +PT E N A + V A TG ++TG + ++
Sbjct: 60 IVDMLSRDPYGIFALCLSPTRELANQIADQFTVFGAGTG------LNCMVITGGEDLIQQ 113
Query: 114 PTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALIL 158
T + + + E S+NT ++ +KL LIL
Sbjct: 114 ATALSRRPNIVVATPGRLFEHF-MHSSNTVQYF----SKLKCLIL 153
>gi|416106824|ref|ZP_11590073.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
gi|348006026|gb|EGY46492.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype c str. SCC2302]
Length = 609
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 3 FMDLGLPEFILNAVSDLGFQTPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 61
Query: 64 GI 65
I
Sbjct: 62 KI 63
>gi|261868715|ref|YP_003256637.1| cold-shock deAd box protein a [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|415769976|ref|ZP_11484591.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|444345967|ref|ZP_21153965.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|261414047|gb|ACX83418.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|348657009|gb|EGY74606.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443542206|gb|ELT52565.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 595
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 3 FMDLGLPEFILNAVSDLGFQTPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 61
Query: 64 GI 65
I
Sbjct: 62 KI 63
>gi|227542566|ref|ZP_03972615.1| superfamily II helicase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227181764|gb|EEI62736.1| superfamily II helicase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 718
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ K +P I+ A+ + GF+TP+ IQ+ +P ALL +D+VG A+TG+GKT AF +PI+
Sbjct: 112 FDKLGLPSDILEAVKKVGFETPSPIQARTIP-ALLDGRDVVGLAQTGTGKTAAFALPIIA 170
Query: 64 GIVNKLENP 72
I +P
Sbjct: 171 RIDKSNRSP 179
>gi|227487924|ref|ZP_03918240.1| superfamily II helicase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227092130|gb|EEI27442.1| superfamily II helicase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 718
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ K +P I+ A+ + GF+TP+ IQ+ +P ALL +D+VG A+TG+GKT AF +PI+
Sbjct: 112 FDKLGLPSDILEAVKKVGFETPSPIQARTIP-ALLDGRDVVGLAQTGTGKTAAFALPIIA 170
Query: 64 GIVNKLENP 72
I +P
Sbjct: 171 RIDKSNRSP 179
>gi|194880138|ref|XP_001974373.1| GG21122 [Drosophila erecta]
gi|190657560|gb|EDV54773.1| GG21122 [Drosophila erecta]
Length = 816
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 390 WSESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 448
Query: 64 GI 65
I
Sbjct: 449 WI 450
>gi|375145001|ref|YP_005007442.1| DEAD/DEAH box helicase [Niastella koreensis GR20-10]
gi|361059047|gb|AEV98038.1| DEAD/DEAH box helicase domain protein [Niastella koreensis
GR20-10]
Length = 419
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ N+ E I+RAL +G+ TPT IQ +P +L RKD+ G A TG+GKT AF IP+L
Sbjct: 3 FQNLNVIEPILRALNNEGYTTPTPIQEQAIP-LVLQRKDLFGCARTGTGKTAAFAIPVL 60
>gi|416076365|ref|ZP_11585446.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348004969|gb|EGY45459.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
Length = 603
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FMDLGLPEFILNAVSDLGFQTPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|325265712|ref|ZP_08132401.1| ATP-dependent RNA helicase RhlE [Kingella denitrificans ATCC
33394]
gi|324982843|gb|EGC18466.1| ATP-dependent RNA helicase RhlE [Kingella denitrificans ATCC
33394]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ N+ + I+ AL G+ +PT IQ+ +P+AL A KDI+ +A+TGSGKT AF +P L
Sbjct: 4 KFADLNLDKNILSALQAAGYDSPTPIQAQSIPAAL-ADKDIMASAQTGSGKTAAFLLPSL 62
Query: 63 TGIVNKLENP 72
IV + E P
Sbjct: 63 QKIVKRSEKP 72
>gi|270290190|ref|ZP_06196416.1| ATP-dependent RNA helicase DeaD [Pediococcus acidilactici 7_4]
gi|270281727|gb|EFA27559.1| ATP-dependent RNA helicase DeaD [Pediococcus acidilactici 7_4]
Length = 511
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%), Gaps = 3/70 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + + E I++A+ G+ PT IQ+ +P +LA KDI+G A+TG+GKT AFG+PIL
Sbjct: 2 KFTELGLEEDILKAVLDNGYDEPTPIQAETIPD-VLAGKDIIGQAQTGTGKTAAFGLPIL 60
Query: 63 TGIVNKLENP 72
+ L+NP
Sbjct: 61 QNV--DLDNP 68
>gi|449551073|gb|EMD42037.1| hypothetical protein CERSUDRAFT_129370 [Ceriporiopsis subvermispora
B]
Length = 794
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
+ ++ N+ II++L GF TPT IQ+ +P ALL KD+VG A TGSGKT AF IP+
Sbjct: 208 SSFLSMNLSRPIIKSLTTLGFNTPTPIQAATIPVALLG-KDVVGNAVTGSGKTAAFIIPM 266
Query: 62 LTGIVNK 68
L ++ +
Sbjct: 267 LERLMYR 273
>gi|358467620|ref|ZP_09177312.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral
taxon 370 str. F0437]
gi|357067539|gb|EHI77649.1| hypothetical protein HMPREF9093_01792 [Fusobacterium sp. oral
taxon 370 str. F0437]
Length = 529
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 IL 62
I+
Sbjct: 67 II 68
>gi|422932838|ref|ZP_16965763.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
gi|339892024|gb|EGQ80925.1| ATP-dependent RNA helicase DeaD [Fusobacterium nucleatum subsp.
animalis ATCC 51191]
Length = 296
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 IL 62
I+
Sbjct: 67 II 68
>gi|294783794|ref|ZP_06749118.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
sp. 1_1_41FAA]
gi|294480672|gb|EFG28449.1| ATP-dependent RNA helicase, DEAD/DEAH box family [Fusobacterium
sp. 1_1_41FAA]
Length = 529
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLGEKVLKVLSKKGYESPTPIQRLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 IL 62
I+
Sbjct: 67 II 68
>gi|340753231|ref|ZP_08690020.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|422315292|ref|ZP_16396730.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
gi|229422830|gb|EEO37877.1| ATP-dependent RNA helicase [Fusobacterium sp. 2_1_31]
gi|404592614|gb|EKA94414.1| hypothetical protein FPOG_02366 [Fusobacterium periodonticum D10]
Length = 529
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ + + E +++ L +KG+++PT IQ + +P+ L KDI+G A+TG+GKT AF +P
Sbjct: 7 LKEFRELGLGEKVLKVLSKKGYESPTPIQKLTIPALLKNDKDIIGQAQTGTGKTAAFSLP 66
Query: 61 IL 62
I+
Sbjct: 67 II 68
>gi|427794033|gb|JAA62468.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1111
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + + ++ L + GF+ PT IQ+ +P A+++ +D++G A+TGSGKTLAF +P+
Sbjct: 417 WAQCGVSKKVLELLKKHGFEKPTPIQAQAIP-AVMSGRDLIGIAKTGSGKTLAFLLPMFR 475
Query: 64 GIVNKLENPTEEDE 77
I++ + P E+D+
Sbjct: 476 HILD--QPPLEDDD 487
>gi|70943453|ref|XP_741771.1| ATP-dependent RNA helicase [Plasmodium chabaudi chabaudi]
gi|56520361|emb|CAH82196.1| ATP-dependent RNA helicase, putative [Plasmodium chabaudi chabaudi]
Length = 557
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 39/167 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ + E+I+ L + FK PT IQ + P AL + KD++G AETGSGKTLAF +P
Sbjct: 130 ITQFSDLDFHESILNYL-NENFKEPTAIQKITWPIAL-SGKDLIGVAETGSGKTLAFVLP 187
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDEN 120
L I+ + E++ + + + NKL +E ++N
Sbjct: 188 CLMHILKHKQAEMEQNGGEHIKNN-----------------------ENKL---SESNKN 221
Query: 121 DSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
D+ + + E + + E T Y LIL PTREL +Q
Sbjct: 222 DNNYDPDFENEFQNEDNEDRKT-----------YGLILLPTRELCMQ 257
>gi|403223642|dbj|BAM41772.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 567
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F++ +++++A+Y+ G++ PT IQ+ V+P AL KD++ AETGSGKT +F IP L
Sbjct: 73 WSDFSLCKSLLKAIYELGYEHPTLIQTKVIPLALEG-KDLLVTAETGSGKTASFVIPTLQ 131
Query: 64 GIV 66
+V
Sbjct: 132 RLV 134
>gi|365891188|ref|ZP_09429640.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. STM 3809]
gi|365332881|emb|CCE02171.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. STM 3809]
Length = 473
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + FN+ + + RAL ++ + TPT IQ+ +P AL R D++G A+TG+GKT +F +P
Sbjct: 1 MTSFQDFNLADALTRALKEENYTTPTPIQAQTIPLALQGR-DVIGIAQTGTGKTASFALP 59
Query: 61 ILTGIVNKLENP 72
IL +++ P
Sbjct: 60 ILHRLLDNRIKP 71
>gi|149236141|ref|XP_001523948.1| hypothetical protein LELG_04761 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013497|sp|A5E572.1|DBP9_LODEL RecName: Full=ATP-dependent RNA helicase DBP9
gi|146452324|gb|EDK46580.1| hypothetical protein LELG_04761 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 606
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W N+ +++A+ + GF+ PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 22 WDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPIIQ 81
Query: 64 GIV 66
I+
Sbjct: 82 NIM 84
>gi|91200410|emb|CAJ73457.1| strongly similar to ATP-dependent RNA helicase [Candidatus
Kuenenia stuttgartiensis]
Length = 524
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + E+ ++ L +KG++ PT IQ +P+ L KDIVG A+TG+GKT AFG+P
Sbjct: 1 MESFESLGLSESTLKVLKEKGYEEPTPIQQKTIPAILSGTKDIVGQAQTGTGKTAAFGLP 60
Query: 61 IL 62
+L
Sbjct: 61 VL 62
>gi|342218233|ref|ZP_08710855.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
gi|341590668|gb|EGS33904.1| DEAD-box ATP-dependent RNA helicase CshA [Megasphaera sp. UPII
135-E]
Length = 515
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ NI TI++AL GF+ PT IQ+ +P AL +D++G A+TG+GKT AFGIP
Sbjct: 2 LEKFQNLNISTTILQALNTMGFEEPTPIQAEAIPVALQG-QDMIGQAQTGTGKTAAFGIP 60
Query: 61 ILTGIV 66
+L I+
Sbjct: 61 VLEKIL 66
>gi|321252662|ref|XP_003192483.1| DEAD box RNA helicase [Cryptococcus gattii WM276]
gi|317458951|gb|ADV20696.1| DEAD box RNA helicase, putative [Cryptococcus gattii WM276]
Length = 798
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSAL-LARKDIVGAAETGSGKTLAFGIP 60
+W N+ +IR+L + FK+PT IQ +P +L +DI+G A TGSGKTLA+ IP
Sbjct: 27 GQWRALNVGPDLIRSLLMRKFKSPTPIQRAAIPPSLSTPPRDILGMARTGSGKTLAYLIP 86
Query: 61 IL--TGIVNKLENP 72
+L TG + + P
Sbjct: 87 LLQRTGSTHHGQGP 100
>gi|325279879|ref|YP_004252421.1| DEAD/DEAH box helicase domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324311688|gb|ADY32241.1| DEAD/DEAH box helicase domain protein [Odoribacter splanchnicus
DSM 20712]
Length = 374
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI + I++A+ +KG+ PT IQ +P AL +RKDI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNIIQPILKAIEEKGYNRPTPIQQQAIPVAL-SRKDILGCAQTGTGKTASFAIPII 60
>gi|427795059|gb|JAA62981.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 1123
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + + ++ L + GF+ PT IQ+ +P A+++ +D++G A+TGSGKTLAF +P+
Sbjct: 395 WAQCGVSKKVLELLKKHGFEKPTPIQAQAIP-AVMSGRDLIGIAKTGSGKTLAFLLPMFR 453
Query: 64 GIVNKLENPTEEDE 77
I++ + P E+D+
Sbjct: 454 HILD--QPPLEDDD 465
>gi|300783976|ref|YP_003764267.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei U32]
gi|384147221|ref|YP_005530037.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
gi|399535861|ref|YP_006548523.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
gi|299793490|gb|ADJ43865.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei U32]
gi|340525375|gb|AEK40580.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
gi|398316631|gb|AFO75578.1| ATP-dependent RNA helicase [Amycolatopsis mediterranei S699]
Length = 534
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE ++RAL + G +P IQS +P AL R D++G A+TGSGKTLAFG+ +L
Sbjct: 46 FAELGLPEPLLRALSEAGINSPFPIQSATIPDALAGR-DVLGRAQTGSGKTLAFGLAMLA 104
Query: 64 GIVNKLENP 72
+ + P
Sbjct: 105 RLADGKARP 113
>gi|456358119|dbj|BAM92564.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain,
RhlE protein [Agromonas oligotrophica S58]
Length = 471
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + FN+ + + RAL ++ + TPT IQ+ +P AL R D+VG A+TG+GKT +F +P
Sbjct: 1 MTSFQDFNLADALTRALKEENYTTPTPIQAQTIPIALQGR-DVVGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|345428775|ref|YP_004821891.1| ATP-dependent RNA helicase [Haemophilus parainfluenzae T3T1]
gi|301154834|emb|CBW14297.1| ATP-dependent RNA helicase [Haemophilus parainfluenzae T3T1]
Length = 616
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M + + FN +PE I++A+ GF+TP+ IQ +P ALL +D++G A+TGSGKT AF
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIP-ALLEGRDVLGMAQTGSGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+PIL I ++P
Sbjct: 60 SLPILAKIDPAAKHP 74
>gi|90408322|ref|ZP_01216486.1| ATP-dependent RNA helicase DeaD [Psychromonas sp. CNPT3]
gi|90310553|gb|EAS38674.1| ATP-dependent RNA helicase DeaD [Psychromonas sp. CNPT3]
Length = 579
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
N+PE +++ + + G++TP+ IQ+ +P LL KD++G A+TG+GKT AF +P+L I
Sbjct: 16 LNLPEALLKVVSEMGYETPSPIQAQCIPH-LLNGKDVLGLAQTGTGKTAAFALPLLANID 74
Query: 67 NKLENP 72
L+ P
Sbjct: 75 LSLKAP 80
>gi|291225666|ref|XP_002732826.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23-like
[Saccoglossus kowalevskii]
Length = 768
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +P+ II + G+K PT IQ +P L R D++G AETGSGKT AF IP+L
Sbjct: 341 WTEAGLPDYIIDVIDSMGYKEPTPIQRQAIPIGLQNR-DVIGVAETGSGKTAAFLIPLLV 399
Query: 64 GIVNKLENPTEEDENDSARKDIVGA----AETGSGKTLAFGIPILTGIVNKLENPTEEDE 119
I + + +ED + I+ A+ +T+ FG P+ V+ + + ED+
Sbjct: 400 WISSLPKIARQEDVDQGPYAVILAPTRELAQQIEAETINFGKPLGIRTVSIIGGISREDQ 459
>gi|388852991|emb|CCF53439.1| probable DBP3-putative RNA helicase required for pre-rRNA
processing [Ustilago hordei]
Length = 574
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I + + L +GF TPT IQ+ P LL KD+VG AETGSGKT AFG+P L +V K
Sbjct: 155 IDAAVKKTLDAQGFTTPTPIQACCWP-VLLQDKDVVGIAETGSGKTFAFGLPALQHLVTK 213
>gi|255691171|ref|ZP_05414846.1| ATP-dependent RNA helicase RhlE [Bacteroides finegoldii DSM
17565]
gi|260623074|gb|EEX45945.1| DEAD/DEAH box helicase [Bacteroides finegoldii DSM 17565]
Length = 374
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI E I++A+ +KG+ PT IQ +P+AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 6 LNIIEPILKAIEEKGYIAPTSIQEKAIPAAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|225561576|gb|EEH09856.1| ATP-dependent RNA helicase DRS1 [Ajellomyces capsulatus G186AR]
Length = 829
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 310 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 364
>gi|429855665|gb|ELA30611.1| ATP-dependent RNA helicase mak5 [Colletotrichum gloeosporioides
Nara gc5]
Length = 749
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M++W+ + I+ A+ + F P+ IQ +P +LA D++G A TGSGKTLAF IP
Sbjct: 189 MSQWIDLGLSPAIVSAIAKLKFTKPSNIQKSSIPE-ILAGHDVIGKASTGSGKTLAFSIP 247
Query: 61 ILTGIVNKLENPTEEDENDSA 81
I+ + K + E + + A
Sbjct: 248 IVEDWIEKFDAKDGEKDTEHA 268
>gi|325091017|gb|EGC44327.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H88]
Length = 828
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 309 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 363
>gi|296170155|ref|ZP_06851752.1| ATP-dependent RNA helicase DeaD [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895181|gb|EFG74896.1| ATP-dependent RNA helicase DeaD [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 566
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAIADVGYESPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|381164896|ref|ZP_09874126.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea
NA-128]
gi|379256801|gb|EHY90727.1| DNA/RNA helicase, superfamily II [Saccharomonospora azurea
NA-128]
Length = 451
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ + + N+P+ + RAL + G P IQ+ +P AL R D++G A+TGSGKTLAFG+
Sbjct: 23 VSTFAELNLPQPLHRALQKAGMDAPFPIQAATLPDALAGR-DVLGRAQTGSGKTLAFGLA 81
Query: 61 ILT 63
+L+
Sbjct: 82 LLS 84
>gi|226295334|gb|EEH50754.1| ATP-dependent RNA helicase drs1 [Paracoccidioides brasiliensis
Pb18]
Length = 755
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 304 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 358
>gi|386727758|ref|YP_006194084.1| protein DbpA [Paenibacillus mucilaginosus K02]
gi|384094883|gb|AFH66319.1| DbpA [Paenibacillus mucilaginosus K02]
Length = 482
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A++ ++ + E I+RAL G+K PT++Q V+P+ALL KDI + TGSGKT A+GIPI
Sbjct: 3 ADFREYGLSEEILRALDTLGYKEPTEVQREVIPAALLG-KDITVKSRTGSGKTAAYGIPI 61
>gi|297571406|ref|YP_003697180.1| DEAD/DEAH box helicase [Arcanobacterium haemolyticum DSM 20595]
gi|296931753|gb|ADH92561.1| DEAD/DEAH box helicase domain protein [Arcanobacterium
haemolyticum DSM 20595]
Length = 620
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ N+PETI+ A+ GF +PT IQ +P LL +D++G A+TG+GKT AF +P+L
Sbjct: 7 FADLNLPETILSAVTDLGFTSPTAIQEQAIP-LLLEGRDVLGVAQTGTGKTAAFALPMLA 65
Query: 64 GI 65
+
Sbjct: 66 HV 67
>gi|419846080|ref|ZP_14369337.1| cold-shock DEAD-box protein A [Haemophilus parainfluenzae HK2019]
gi|386414375|gb|EIJ28931.1| cold-shock DEAD-box protein A [Haemophilus parainfluenzae HK2019]
Length = 612
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M + + FN +PE I++A+ GF+TP+ IQ +P ALL +D++G A+TGSGKT AF
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIP-ALLEGRDVLGMAQTGSGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+PIL I ++P
Sbjct: 60 SLPILAKIDPTAKHP 74
>gi|378551112|ref|ZP_09826328.1| hypothetical protein CCH26_13526 [Citricoccus sp. CH26A]
Length = 578
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ FN+ ++ AL +KG P IQ+M +P AL DI+G A+TG+GKTL FG+P+L
Sbjct: 46 FADFNVRADMVEALAEKGITHPFPIQAMTLPVAL-GGHDIIGQAKTGTGKTLGFGLPLLQ 104
Query: 64 GIVN 67
++
Sbjct: 105 RVIG 108
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 316 WVQCGISMKILNSLRKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 374
Query: 64 GIVNK 68
I+++
Sbjct: 375 HIMDQ 379
>gi|427383474|ref|ZP_18880194.1| hypothetical protein HMPREF9447_01227 [Bacteroides oleiciplenus
YIT 12058]
gi|425728658|gb|EKU91513.1| hypothetical protein HMPREF9447_01227 [Bacteroides oleiciplenus
YIT 12058]
Length = 484
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E + RAL +K + TPT IQ +P AL R D++G A+TG+GKT AF +PI+
Sbjct: 3 FKQMNISEPVCRALLEKDYSTPTLIQEQAIPEALTGR-DLLGLAQTGTGKTAAFAVPII 60
>gi|327348577|gb|EGE77434.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ATCC
18188]
Length = 772
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +I I +L + F PT IQS +P A+ A D+VG A TGSGKTLAFGIP
Sbjct: 187 VSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIP-AIAAGHDVVGKASTGSGKTLAFGIP 245
Query: 61 ILTGIV-NKLENPTEEDEN-DSARKD 84
IL + + + P+++ ++ +SA KD
Sbjct: 246 ILEYYLETRHDEPSQQHKDPESAGKD 271
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 24/88 (27%)
Query: 80 SARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 139
+A D+VG A TGSGKTLAFGIPIL E LE +E
Sbjct: 223 AAGHDVVGKASTGSGKTLAFGIPIL------------------------EYYLETRHDEP 258
Query: 140 ANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ + + ALIL+PTRELA Q
Sbjct: 259 SQQHKDPESAGKDPIALILSPTRELAHQ 286
>gi|239611412|gb|EEQ88399.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis ER-3]
Length = 772
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +I I +L + F PT IQS +P A+ A D+VG A TGSGKTLAFGIP
Sbjct: 187 VSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIP-AIAAGHDVVGKASTGSGKTLAFGIP 245
Query: 61 ILTGIVNKLENPTEEDENDSARKDI 85
IL + T DE KD+
Sbjct: 246 ILEYYLE-----TRHDEPSQQHKDL 265
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 42/88 (47%), Gaps = 24/88 (27%)
Query: 80 SARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 139
+A D+VG A TGSGKTLAFGIPIL E LE +E
Sbjct: 223 AAGHDVVGKASTGSGKTLAFGIPIL------------------------EYYLETRHDEP 258
Query: 140 ANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ + ++ ALIL+PTRELA Q
Sbjct: 259 SQQHKDLESVGKDPIALILSPTRELAHQ 286
>gi|195344854|ref|XP_002038991.1| GM17282 [Drosophila sechellia]
gi|194134121|gb|EDW55637.1| GM17282 [Drosophila sechellia]
Length = 822
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 396 WNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 454
Query: 64 GI 65
I
Sbjct: 455 WI 456
>gi|24584994|ref|NP_609888.2| CG10333 [Drosophila melanogaster]
gi|22946759|gb|AAF53680.2| CG10333 [Drosophila melanogaster]
gi|60677727|gb|AAX33370.1| RH55640p [Drosophila melanogaster]
Length = 822
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 396 WNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 454
Query: 64 GI 65
I
Sbjct: 455 WI 456
>gi|21226849|ref|NP_632771.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
gi|20905151|gb|AAM30443.1| ATP-dependent RNA helicase [Methanosarcina mazei Go1]
Length = 587
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A++ + ++ ++AL +KGF+ PT IQ V+P L DI+G A+TG+GKT AFG P
Sbjct: 4 LAKFKALGLSDSTLKALKKKGFEEPTPIQEKVIPLFLKGEADIIGQAQTGTGKTTAFGAP 63
Query: 61 ILTGIVNK 68
I+ I K
Sbjct: 64 IIEKIPEK 71
>gi|406601713|emb|CCH46674.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 588
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP ++ +++ G+K PT IQ +P +L ++KDI+G AETGSGKTLA+ IP
Sbjct: 184 LRNWRESKIPLELLDIIHKLGYKEPTPIQRASIPISL-SKKDIIGIAETGSGKTLAYLIP 242
Query: 61 ILTGIV 66
+L+ ++
Sbjct: 243 MLSKLL 248
>gi|332670437|ref|YP_004453445.1| DEAD/DEAH box helicase domain-containing protein [Cellulomonas
fimi ATCC 484]
gi|332339475|gb|AEE46058.1| DEAD/DEAH box helicase domain protein [Cellulomonas fimi ATCC
484]
Length = 596
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P + RA+ GF TP+ IQS +P ALLA +DIVG A+TG+GKT AFG+P+L
Sbjct: 27 FATLGLPAPLERAVADLGFVTPSAIQSQAVP-ALLAGRDIVGVAQTGTGKTAAFGLPLLA 85
Query: 64 GI 65
+
Sbjct: 86 AV 87
>gi|390933807|ref|YP_006391312.1| DEAD/DEAH box helicase [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389569308|gb|AFK85713.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 513
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + N+ E I++A+ GF+ P+KIQS V+P LL D++G AETG+GKTLA+G PI+
Sbjct: 2 DFKELNLNEKILKAIDDMGFEEPSKIQSEVIP-VLLEGLDVIGQAETGTGKTLAYGAPII 60
Query: 63 TGI 65
Sbjct: 61 NNF 63
>gi|78189083|ref|YP_379421.1| DEAD/DEAH box helicase-like protein [Chlorobium chlorochromatii
CaD3]
gi|78171282|gb|ABB28378.1| ATP-dependent RNA helicase CsdA [Chlorobium chlorochromatii CaD3]
Length = 640
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE +++AL + G+++PT IQ+ +P LLA +D++G A+TG+GKT AF +PIL
Sbjct: 12 FFSLQLPELLMKALEEVGYESPTPIQAQTIP-FLLAGRDVLGQAQTGTGKTAAFALPILA 70
Query: 64 GI 65
I
Sbjct: 71 SI 72
>gi|298482320|ref|ZP_07000507.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
gi|298271607|gb|EFI13181.1| ATP-dependent RNA helicase RhlE [Bacteroides sp. D22]
Length = 374
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIEEKGYTVPTPIQEKAIPPAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|374307851|ref|YP_005054282.1| ATP-dependent RNA helicase DeaD [Filifactor alocis ATCC 35896]
gi|291166137|gb|EFE28183.1| ATP-dependent RNA helicase DeaD [Filifactor alocis ATCC 35896]
Length = 539
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ +FNI + I AL Q GF+ T IQ + +P A KD++G ++TG+GKT AFGIP
Sbjct: 1 MKKFTEFNISKEIQMALEQLGFEEATIIQELAIPIATEG-KDLIGQSQTGTGKTFAFGIP 59
Query: 61 ILTGIV 66
IL I+
Sbjct: 60 ILDNIL 65
>gi|404405997|ref|ZP_10997581.1| DNA/RNA helicase [Alistipes sp. JC136]
Length = 652
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 4/73 (5%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A++ + E ++ A+ KGF++PT IQ + +P L DI+ ++TG+GKT AFG+PI
Sbjct: 5 ADFSTLGLSEQMLEAVRAKGFESPTSIQRLTIPRLLSGDNDIIAQSQTGTGKTAAFGLPI 64
Query: 62 LTGIVNKLENPTE 74
L ++E+ TE
Sbjct: 65 L----QQIEHSTE 73
>gi|389876606|ref|YP_006370171.1| DEAD/DEAH box helicase [Tistrella mobilis KA081020-065]
gi|388527390|gb|AFK52587.1| DEAD/DEAH box helicase domain-containing protein [Tistrella
mobilis KA081020-065]
Length = 528
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + + ET++RAL Q G+ TPT IQ +P L+A +D++G A+TG+GKT AF +P
Sbjct: 1 MTNFSELGLSETLLRALDQAGYVTPTPIQEQAIPH-LVAGRDLLGIAQTGTGKTAAFALP 59
Query: 61 ILTGI 65
IL I
Sbjct: 60 ILNRI 64
>gi|343428420|emb|CBQ71950.1| probable DBP3-putative RNA helicase required for pre-rRNA
processing [Sporisorium reilianum SRZ2]
Length = 589
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I + + L +GF TPT IQ+ P LL KD+VG AETGSGKT AFG+P L +V K
Sbjct: 171 IDAAVKKTLDAQGFLTPTPIQACCWP-VLLQNKDVVGIAETGSGKTFAFGLPALQHLVTK 229
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 27/85 (31%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD+VG AETGSGKT AFG+P L +V K VL+ ++++
Sbjct: 202 KDVVGIAETGSGKTFAFGLPALQHLVTK------------------HNVLDGGKKKAKGA 243
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
++ L++APTRELAIQ
Sbjct: 244 ---------QVNVLVVAPTRELAIQ 259
>gi|225677534|gb|EEH15818.1| ATP-dependent RNA helicase drs1 [Paracoccidioides brasiliensis
Pb03]
Length = 815
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 305 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 359
>gi|50543204|ref|XP_499768.1| YALI0A04939p [Yarrowia lipolytica]
gi|49645633|emb|CAG83693.1| YALI0A04939p [Yarrowia lipolytica CLIB122]
Length = 998
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 12 TIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++I+ LY G+K+PT+IQ +P +LA D++G A TGSGKTLA+G+PIL
Sbjct: 367 SLIQGLYALGYKSPTEIQKKSIP-PILAGDDVIGKASTGSGKTLAYGLPIL 416
>gi|407771546|ref|ZP_11118901.1| DEAD/DEAH box helicase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407285433|gb|EKF10934.1| DEAD/DEAH box helicase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 653
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + E I++A+ G+ TPT IQS +PS L+AR DI+G A+TG+GKT F +P+L
Sbjct: 3 FADLGLSEDILKAVADAGYDTPTPIQSQAIPSVLMAR-DILGCAQTGTGKTAGFVLPML 60
>gi|383786573|ref|YP_005471142.1| DNA/RNA helicase [Fervidobacterium pennivorans DSM 9078]
gi|383109420|gb|AFG35023.1| DNA/RNA helicase, superfamily II [Fervidobacterium pennivorans
DSM 9078]
Length = 548
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F + + + A+ +KG+ PT+IQ +V+P AL KDI+ A+TG+GKT AF IPIL
Sbjct: 19 FGLSKETLSAIEKKGYTQPTEIQKLVLPVALETDKDIIAQAQTGTGKTAAFAIPIL 74
>gi|261205266|ref|XP_002627370.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
gi|239592429|gb|EEQ75010.1| ATP-dependent RNA helicase MAK5 [Ajellomyces dermatitidis SLH14081]
Length = 772
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +I I +L + F PT IQS +P A+ A D+VG A TGSGKTLAFGIP
Sbjct: 187 VSAWGPLDISAEIQTSLSKLKFAKPTPIQSACIP-AIAAGHDVVGKASTGSGKTLAFGIP 245
Query: 61 ILTGIV-NKLENPTEEDEN-DSARKD 84
IL + + + P+++ ++ +SA KD
Sbjct: 246 ILEYYLETRHDEPSQQHKDRESAGKD 271
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 41/88 (46%), Gaps = 24/88 (27%)
Query: 80 SARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 139
+A D+VG A TGSGKTLAFGIPIL E LE +E
Sbjct: 223 AAGHDVVGKASTGSGKTLAFGIPIL------------------------EYYLETRHDEP 258
Query: 140 ANTTEFVKKTRNKLYALILAPTRELAIQ 167
+ + + ALIL+PTRELA Q
Sbjct: 259 SQQHKDRESAGKDPIALILSPTRELAHQ 286
>gi|295664398|ref|XP_002792751.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278865|gb|EEH34431.1| ATP-dependent RNA helicase drs1 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 835
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 318 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 372
>gi|282855404|ref|ZP_06264727.1| cold-shock deAd box protein a [Pyramidobacter piscolens W5455]
gi|282586784|gb|EFB92029.1| cold-shock deAd box protein a [Pyramidobacter piscolens W5455]
Length = 467
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + FN+PE+ + AL Q+GF TPT +Q+ V+ L D+V A TGSGKTLAF +P+
Sbjct: 16 ASFRDFNLPESFLAALDQRGFTTPTPVQAQVLSQPNLD-TDMVVQARTGSGKTLAFLLPL 74
Query: 62 LT 63
L+
Sbjct: 75 LS 76
>gi|312139811|ref|YP_004007147.1| dead/deah box helicase [Rhodococcus equi 103S]
gi|311889150|emb|CBH48463.1| putative DEAD/DEAH box helicase [Rhodococcus equi 103S]
Length = 700
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE ++ AL + P+ IQ+M +P A+ A K+I+G A+TGSGKTLAFG+P+L
Sbjct: 3 FAEIGLPEPVVAALARNSITVPSPIQAMAIPDAI-AGKNILGRAQTGSGKTLAFGLPMLA 61
Query: 64 GIVNKLENP 72
+ + P
Sbjct: 62 RLARHEDRP 70
>gi|261189897|ref|XP_002621359.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
gi|239591595|gb|EEQ74176.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis SLH14081]
Length = 834
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 316 FSLSRPILRGLTSVGFTTPTPIQQKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 370
>gi|416067607|ref|ZP_11582351.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348001984|gb|EGY42707.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 600
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FMDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|415757848|ref|ZP_11481481.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416049990|ref|ZP_11576806.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|429734662|ref|ZP_19268669.1| cold-shock DEAD-box protein A [Aggregatibacter
actinomycetemcomitans Y4]
gi|347990985|gb|EGY32499.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype d str. I63B]
gi|348655344|gb|EGY70803.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|429151508|gb|EKX94374.1| cold-shock DEAD-box protein A [Aggregatibacter
actinomycetemcomitans Y4]
Length = 600
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FMDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|399523842|ref|ZP_10764443.1| DEAD/DEAH box helicase [Atopobium sp. ICM58]
gi|398375104|gb|EJN52568.1| DEAD/DEAH box helicase [Atopobium sp. ICM58]
Length = 722
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE I+ A+ GF+ PT IQ+ +P LL +D+VG A+TG+GKT AFG+P+L
Sbjct: 49 FASLGLPEEILEAVTDMGFRVPTPIQAAAIPP-LLELRDVVGIAQTGTGKTAAFGLPLLA 107
>gi|387121415|ref|YP_006287298.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|385875907|gb|AFI87466.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 595
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 3 FMDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 61
Query: 64 GI 65
I
Sbjct: 62 KI 63
>gi|392305434|emb|CCI71797.1| DEAD-box ATP dependent DNA helicase [Paenibacillus polymyxa M1]
Length = 481
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + + E I+RAL G++TPT+IQ+ V+P AL +KD+V ++TGSGKT A+GIP+
Sbjct: 5 HFADYPLSEEIVRALNSLGYETPTEIQTEVIPVAL-EKKDLVAKSQTGSGKTAAYGIPLC 63
>gi|418464893|ref|ZP_13035832.1| cold-shock deAd box protein a [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756848|gb|EHK91005.1| cold-shock deAd box protein a [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 592
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 5 VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTG 64
+ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 1 MDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILAK 59
Query: 65 IVNKLENP 72
I ++P
Sbjct: 60 IAPNEKHP 67
>gi|327352045|gb|EGE80902.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ATCC 18188]
Length = 834
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 316 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 370
>gi|301300913|ref|ZP_07207085.1| putative DEAD-box ATP-dependent RNA helicase CshB [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300851512|gb|EFK79224.1| putative DEAD-box ATP-dependent RNA helicase CshB [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 440
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + +FN E I +AL + FK PT++Q+ ++P+ +L K +VG ++TGSGKT F +P
Sbjct: 1 MANFREFNFKEYIYQALDEINFKEPTEVQARLIPT-ILKGKSVVGQSQTGSGKTHTFLLP 59
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGI 101
I +N +A+KD V A T + LA+ I
Sbjct: 60 IF--------------QNLNAQKDEVQAVITTPSRELAYQI 86
>gi|50424613|ref|XP_460896.1| DEHA2F12232p [Debaryomyces hansenii CBS767]
gi|74688654|sp|Q6BLM5.1|DBP9_DEBHA RecName: Full=ATP-dependent RNA helicase DBP9
gi|49656565|emb|CAG89246.1| DEHA2F12232p [Debaryomyces hansenii CBS767]
Length = 586
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F + +++A+ Q GF+ PT IQS +P A+ ++DI+ A TGSGKT A+ IPI+
Sbjct: 23 WESFGLDARLLQAIDQLGFENPTLIQSSAIPLAIEEKRDIIAKASTGSGKTAAYSIPIIQ 82
Query: 64 GIV 66
++
Sbjct: 83 NLL 85
>gi|452209335|ref|YP_007489449.1| Cold-shock DEAD-box protein A [Methanosarcina mazei Tuc01]
gi|452099237|gb|AGF96177.1| Cold-shock DEAD-box protein A [Methanosarcina mazei Tuc01]
Length = 610
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A++ + ++ ++AL +KGF+ PT IQ V+P L DI+G A+TG+GKT AFG P
Sbjct: 4 LAKFKALGLSDSTLKALKKKGFEEPTPIQEKVIPLFLKGEADIIGQAQTGTGKTTAFGAP 63
Query: 61 ILTGIVNK-------LENPTEE------DENDSARKD----IV----GAAETGSGKTLAF 99
I+ I K + PT E +E +S + D IV G + T + L
Sbjct: 64 IIEKIPEKSGHVQAIILTPTRELAIQVSEELNSIKGDKKLYIVPIYGGQSMTQQLRVLKS 123
Query: 100 GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
G+ I+ G ++ + E LE A VL+E +E
Sbjct: 124 GVDIVVGTPGRVIDHLE--RKSLNLEHIAYFVLDEADE 159
>gi|383936096|ref|ZP_09989526.1| ATP-dependent RNA helicase DeaD [Rheinheimera nanhaiensis E407-8]
gi|383702852|dbj|GAB59617.1| ATP-dependent RNA helicase DeaD [Rheinheimera nanhaiensis E407-8]
Length = 590
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%), Gaps = 9/79 (11%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M++ V F+ +PE I+RA+ + G++TP+ IQ+ +P LLA +D++G A+TG+GKT AF
Sbjct: 1 MSDTVSFSQLMLPEAIVRAVTELGYETPSPIQAAAIPK-LLAGEDVLGQAQTGTGKTGAF 59
Query: 58 GIPILTGIVNKLENPTEED 76
+P+L + +P + D
Sbjct: 60 ALPLLARL-----DPAQND 73
>gi|239612877|gb|EEQ89864.1| 2-isopropylmalate synthase [Ajellomyces dermatitidis ER-3]
Length = 834
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 316 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 370
>gi|336372365|gb|EGO00704.1| hypothetical protein SERLA73DRAFT_105076 [Serpula lacrymans var.
lacrymans S7.3]
Length = 681
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A ++ N+ II+AL G PT IQ+ +P ALL KD+VG A TGSGKT AF IPI
Sbjct: 186 ASFLTMNLSRPIIKALTTMGLHKPTPIQAAAVPVALLG-KDVVGGAVTGSGKTAAFTIPI 244
Query: 62 L 62
+
Sbjct: 245 I 245
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 515 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 573
Query: 64 GIVNK 68
I+++
Sbjct: 574 HIMDQ 578
>gi|291514657|emb|CBK63867.1| Superfamily II DNA and RNA helicases [Alistipes shahii WAL 8301]
Length = 690
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 41/64 (64%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A++ + E ++ A+ KGF+TPT IQ + +P L DI+ ++TG+GKT AFG+PI
Sbjct: 25 ADFSALGLSEEMLAAVQAKGFETPTSIQRLTIPRLLSGENDIIAQSQTGTGKTAAFGLPI 84
Query: 62 LTGI 65
L I
Sbjct: 85 LQQI 88
>gi|395324143|gb|EJF56589.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1073
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W F +P + + + + G+ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P
Sbjct: 414 VTKWSHFGLPASCLEVIKKLGYAAPTPIQAQAIP-AIMSGRDVIGVAKTGSGKTIAFLLP 472
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E+ E
Sbjct: 473 MFRHI--KDQRPLEQME 487
>gi|416034326|ref|ZP_11573308.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|347998190|gb|EGY39128.1| preprotein translocase subunit SecF [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
Length = 600
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FMDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|384170944|ref|YP_005552321.1| DEAD-box ATP dependent DNA helicase [Arcobacter sp. L]
gi|345470554|dbj|BAK72004.1| DEAD-box ATP dependent DNA helicase [Arcobacter sp. L]
Length = 511
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
FN E + +A+ + GFK P+ IQ MP +L KDIVG A TG+GKT AFG+PIL +
Sbjct: 6 FNFKEQLQKAIEEAGFKEPSPIQEQAMP-FILNGKDIVGQAHTGTGKTAAFGLPILNRLK 64
Query: 67 NK 68
K
Sbjct: 65 GK 66
>gi|227891108|ref|ZP_04008913.1| ATP-dependent RNA helicase [Lactobacillus salivarius ATCC 11741]
gi|417788678|ref|ZP_12436361.1| ATP-dependent RNA helicase YqfR [Lactobacillus salivarius NIAS840]
gi|417810036|ref|ZP_12456717.1| ATP-dependent RNA helicase [Lactobacillus salivarius GJ-24]
gi|418961607|ref|ZP_13513492.1| ATP-dependent RNA helicase [Lactobacillus salivarius SMXD51]
gi|227866982|gb|EEJ74403.1| ATP-dependent RNA helicase [Lactobacillus salivarius ATCC 11741]
gi|334308855|gb|EGL99841.1| ATP-dependent RNA helicase YqfR [Lactobacillus salivarius NIAS840]
gi|335350960|gb|EGM52456.1| ATP-dependent RNA helicase [Lactobacillus salivarius GJ-24]
gi|380343702|gb|EIA32050.1| ATP-dependent RNA helicase [Lactobacillus salivarius SMXD51]
Length = 440
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + +FN E I +AL + FK PT++Q+ ++P+ +L K +VG ++TGSGKT F +P
Sbjct: 1 MANFREFNFKEYIYQALDEINFKEPTEVQARLIPT-ILKGKSVVGQSQTGSGKTHTFLLP 59
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGI 101
I +N +A+KD V A T + LA+ I
Sbjct: 60 IF--------------QNLNAQKDEVQAVITTPSRELAYQI 86
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 306 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 364
Query: 64 GIVNK 68
I+++
Sbjct: 365 HIMDQ 369
>gi|423216420|ref|ZP_17202944.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
gi|392690791|gb|EIY84045.1| hypothetical protein HMPREF1074_04476 [Bacteroides xylanisolvens
CL03T12C04]
Length = 374
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|332669674|ref|YP_004452682.1| DEAD/DEAH box helicase domain-containing protein [Cellulomonas fimi
ATCC 484]
gi|332338712|gb|AEE45295.1| DEAD/DEAH box helicase domain protein [Cellulomonas fimi ATCC 484]
Length = 590
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + F++ I++AL G P IQ+M +P AL +R DI+G A+TG+GKTL FG+P+
Sbjct: 46 ASFADFDVRPEIVQALADAGISHPFPIQAMTLPVAL-SRHDIIGQAKTGTGKTLGFGVPL 104
Query: 62 LTGIV 66
L +V
Sbjct: 105 LNAVV 109
>gi|310644788|ref|YP_003949547.1| DEAD/DEAH box helicase [Paenibacillus polymyxa SC2]
gi|309249739|gb|ADO59306.1| DEAD/DEAH box helicase domain protein [Paenibacillus polymyxa
SC2]
Length = 481
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + + E I+RAL G++TPT+IQ+ V+P AL +KD+V ++TGSGKT A+GIP+
Sbjct: 5 HFADYPLSEEIVRALNSLGYETPTEIQTEVIPVAL-EKKDLVAKSQTGSGKTAAYGIPLC 63
>gi|296108765|ref|YP_003615714.1| DEAD/DEAH box helicase domain protein [methanocaldococcus
infernus ME]
gi|295433579|gb|ADG12750.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus
infernus ME]
Length = 357
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + + ++AL +KGFK PTKIQ ++P L +IVG A+TG+GKT AFG+PI+
Sbjct: 2 DFKSLGLSDNTLKALKRKGFKKPTKIQEKIIPILLSEDVNIVGQAQTGTGKTAAFGLPII 61
Query: 63 TGI 65
I
Sbjct: 62 EKI 64
>gi|225679099|gb|EEH17383.1| ATP-dependent RNA helicase mak5 [Paracoccidioides brasiliensis
Pb03]
Length = 772
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W I + +L + F PT IQS +P + A D+VG A TGSGKTLAFGIP
Sbjct: 193 VSAWEPLGISAELQTSLAKLKFAKPTPIQSACIP-VIAAGHDVVGKAPTGSGKTLAFGIP 251
Query: 61 IL-TGIVNKLENPTEEDENDSARK 83
IL + N + P + +DS+RK
Sbjct: 252 ILEYHLENNRDEPIQNTGSDSSRK 275
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 44/88 (50%), Gaps = 25/88 (28%)
Query: 80 SARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 139
+A D+VG A TGSGKTLAFGIPIL LEN +E ++G +
Sbjct: 229 AAGHDVVGKAPTGSGKTLAFGIPILE---YHLENNRDEPIQNTGSDS------------- 272
Query: 140 ANTTEFVKKTRNKLYALILAPTRELAIQ 167
+R ALIL+PTRELA Q
Sbjct: 273 ---------SRKHPIALILSPTRELAHQ 291
>gi|189201219|ref|XP_001936946.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984045|gb|EDU49533.1| ATP-dependent RNA helicase MAK5 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 778
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + + E ++ AL + F PT IQ +P +LA +D++G A TGSGKTLAFGIP
Sbjct: 208 VSAWDELELSEEMLGALAKLKFSKPTTIQKSTIPE-ILAGRDVIGKASTGSGKTLAFGIP 266
Query: 61 ILTGIVNKLENPTEEDEN 78
I+ + + ++E E+
Sbjct: 267 IVESYLASRSSASKEPED 284
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|399020147|ref|ZP_10722287.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
gi|398096157|gb|EJL86486.1| DNA/RNA helicase, superfamily II [Herbaspirillum sp. CF444]
Length = 899
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ N+ E ++R L + G++TP+ IQ+ +P+ LL +D++G A+TG+GKT AF +P
Sbjct: 6 LPQFSDLNLSEPLLRVLKELGYETPSPIQAATIPT-LLNNRDVLGQAQTGTGKTAAFALP 64
Query: 61 ILTGI 65
IL+ I
Sbjct: 65 ILSRI 69
>gi|295085349|emb|CBK66872.1| Superfamily II DNA and RNA helicases [Bacteroides xylanisolvens
XB1A]
Length = 374
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|262409233|ref|ZP_06085777.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294645798|ref|ZP_06723482.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294809471|ref|ZP_06768175.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
gi|262352980|gb|EEZ02076.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292638877|gb|EFF57211.1| ATP-dependent RNA helicase RhlE [Bacteroides ovatus SD CC 2a]
gi|294443343|gb|EFG12106.1| ATP-dependent RNA helicase RhlE [Bacteroides xylanisolvens SD CC
1b]
Length = 374
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL-AKRDILGCAQTGTGKTASFAIPII 60
>gi|449299906|gb|EMC95919.1| hypothetical protein BAUCODRAFT_508764 [Baudoinia compniacensis
UAMH 10762]
Length = 567
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 21 GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
GFK PT IQ+ P LLA +D+VG AETGSGKTLAFG+P L I
Sbjct: 195 GFKAPTPIQAACWPY-LLAGRDLVGVAETGSGKTLAFGVPCLHHI 238
>gi|365880479|ref|ZP_09419846.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 375]
gi|365291464|emb|CCD92377.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 375]
Length = 481
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + FN+ + + RAL ++ + TPT IQ+ +P AL R D++G A+TG+GKT +F +P
Sbjct: 1 MTSFQDFNLADALTRALKEENYTTPTPIQAQTIPLALQGR-DVIGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|195443116|ref|XP_002069285.1| GK21047 [Drosophila willistoni]
gi|194165370|gb|EDW80271.1| GK21047 [Drosophila willistoni]
Length = 507
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + ET+ +A + +K P+KIQ +P AL KD++G AETGSGKT AF +PIL
Sbjct: 57 WKDLGLNETLCQACEELKWKAPSKIQKEAIPVALQG-KDVIGLAETGSGKTGAFALPILQ 115
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 116 AL---LENP 121
>gi|194878451|ref|XP_001974067.1| GG21281 [Drosophila erecta]
gi|190657254|gb|EDV54467.1| GG21281 [Drosophila erecta]
Length = 524
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + ET+ +A + +K P+KIQ +P AL KD++G AETGSGKT AF +PIL
Sbjct: 71 WKDLGLNETLCQACDELKWKAPSKIQREAIPVALQG-KDVIGLAETGSGKTGAFALPILH 129
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 130 AL---LENP 135
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W F +P + + + + G+ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P
Sbjct: 222 VTKWSHFGLPASCLEVIKKLGYTAPTPIQAQAIP-AIMSGRDVIGVAKTGSGKTIAFLLP 280
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E+ E
Sbjct: 281 MFRHI--KDQRPLEQME 295
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 611 WVQCGISMKILNSLKKHGYEKPTPIQAQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 669
Query: 64 GIVNK 68
I+++
Sbjct: 670 HIMDQ 674
>gi|357031821|ref|ZP_09093763.1| ATP-dependent RNA helicase [Gluconobacter morbifer G707]
gi|356414601|gb|EHH68246.1| ATP-dependent RNA helicase [Gluconobacter morbifer G707]
Length = 437
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + N+ E I +AL ++G+ TPT IQ+ +P LL +D++G A+TG+GKT AF +P
Sbjct: 1 MTSFAELNLAEPIQKALAEEGYTTPTPIQAGAIPH-LLQGRDLLGLAQTGTGKTAAFALP 59
Query: 61 ILTGIVNKLENPT 73
IL ++ + P+
Sbjct: 60 ILDYLLRNRKAPS 72
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 372 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 430
Query: 64 GIVNK 68
I+++
Sbjct: 431 HIMDQ 435
>gi|336406430|ref|ZP_08587085.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345509853|ref|ZP_08789440.1| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
gi|335934634|gb|EGM96619.1| hypothetical protein HMPREF0127_04398 [Bacteroides sp. 1_1_30]
gi|345454658|gb|EEO51805.2| hypothetical protein BSAG_03518 [Bacteroides sp. D1]
Length = 382
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL A++DI+G A+TG+GKT +F IPI+
Sbjct: 11 FKELNITEPILKAIGEKGYTVPTPIQEKAIPPAL-AKRDILGCAQTGTGKTASFAIPII 68
>gi|326924964|ref|XP_003208692.1| PREDICTED: probable ATP-dependent RNA helicase DDX59-like
[Meleagris gallopavo]
Length = 625
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 10 PETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKL 69
PET+ L G++ PT IQ ++P LL R DI+ +A+TGSGKT AF +P++ ++NK
Sbjct: 217 PETLNSNLKNSGYEVPTPIQMQMIPVGLLGR-DILASADTGSGKTAAFLLPVIMKVLNKT 275
Query: 70 ENPT 73
E P+
Sbjct: 276 ETPS 279
>gi|90962087|ref|YP_536003.1| ATP-dependent RNA helicase [Lactobacillus salivarius UCC118]
gi|90821281|gb|ABD99920.1| ATP-dependent RNA helicase [Lactobacillus salivarius UCC118]
Length = 440
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 15/101 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + +FN E I +AL + FK PT++Q+ ++P+ +L K +VG ++TGSGKT F +P
Sbjct: 1 MANFREFNFKEYIYQALDEINFKEPTEVQARLIPT-ILKGKSVVGQSQTGSGKTHTFLLP 59
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGI 101
I +N +A+KD V A T + LA+ I
Sbjct: 60 IF--------------QNLNAQKDEVQAVITTPSRELAYQI 86
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 373 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 431
Query: 64 GIVNK 68
I+++
Sbjct: 432 HIMDQ 436
>gi|399527779|ref|ZP_10767466.1| DEAD/DEAH box helicase [Actinomyces sp. ICM39]
gi|398361715|gb|EJN45457.1| DEAD/DEAH box helicase [Actinomyces sp. ICM39]
Length = 719
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +PE I+ A+ GF+ PT IQ+ +P LL +D+VG A+TG+GKT AFG+P+L
Sbjct: 44 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPP-LLELRDVVGIAQTGTGKTAAFGLPLL 101
>gi|365538739|ref|ZP_09363914.1| ATP-dependent RNA helicase [Vibrio ordalii ATCC 33509]
Length = 421
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ + T++ AL GF+ PT +QS +P +LA KD++ A+TG+GKT AFG+PIL
Sbjct: 10 RLGLSTTLVSALQSLGFEQPTDVQSQAIPH-VLAGKDVMAGAQTGTGKTAAFGLPILQRF 68
Query: 66 VNKLENPTEEDENDSARKDIV 86
L+N E + N + +V
Sbjct: 69 ---LDNQVEREANSKVVRALV 86
>gi|367474852|ref|ZP_09474344.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 285]
gi|365272847|emb|CCD86812.1| putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 285]
Length = 469
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + FN+ + + RAL ++ + TPT IQ+ +P AL R D++G A+TG+GKT +F +P
Sbjct: 1 MTSFQDFNLADALTRALKEENYTTPTPIQAQTIPIALQGR-DVIGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|146338133|ref|YP_001203181.1| ATP-dependent RNA helicase [Bradyrhizobium sp. ORS 278]
gi|146190939|emb|CAL74944.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. ORS 278]
Length = 473
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + FN+ + + RAL ++ + TPT IQ+ +P AL R D++G A+TG+GKT +F +P
Sbjct: 1 MTSFQDFNLADALTRALKEENYTTPTPIQAQTIPLALQGR-DVIGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|5410326|gb|AAD43033.1| RNA helicase [Homo sapiens]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|389641713|ref|XP_003718489.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|374095422|sp|A4REU9.2|MAK5_MAGO7 RecName: Full=ATP-dependent RNA helicase MAK5
gi|351641042|gb|EHA48905.1| ATP-dependent RNA helicase MAK5 [Magnaporthe oryzae 70-15]
gi|440476884|gb|ELQ58053.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae P131]
Length = 760
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++EW + E I+ ++ + F PT IQ+ +P +LA D+VG A TGSGKTLAFGIP
Sbjct: 186 VSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPE-ILAGHDVVGKASTGSGKTLAFGIP 244
Query: 61 IL 62
I+
Sbjct: 245 IV 246
>gi|145539279|ref|XP_001455334.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423133|emb|CAK87937.1| unnamed protein product [Paramecium tetraurelia]
Length = 451
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%), Gaps = 4/52 (7%)
Query: 21 GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP 72
G+K PT IQ +P L +KDI+G AETGSGKTLAFG+PIL + L NP
Sbjct: 31 GYKIPTPIQQQSLPYTL-QKKDIIGLAETGSGKTLAFGLPILQHL---LANP 78
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 39/86 (45%), Gaps = 39/86 (45%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
+KDI+G AETGSGKTLAFG+PIL + L NP
Sbjct: 49 KKDIIGLAETGSGKTLAFGLPILQHL---LANP--------------------------- 78
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
YALIL+PTREL +Q
Sbjct: 79 ---------QPYYALILSPTRELCVQ 95
>gi|376293035|ref|YP_005164709.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC02]
gi|372110358|gb|AEX76418.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC02]
Length = 682
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 373 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 431
Query: 64 GIVNK 68
I+++
Sbjct: 432 HIMDQ 436
>gi|154282923|ref|XP_001542257.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
gi|150410437|gb|EDN05825.1| 2-isopropylmalate synthase [Ajellomyces capsulatus NAm1]
Length = 1466
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 310 FSLSRPILRGLTSVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 364
>gi|148258225|ref|YP_001242810.1| ATP-dependent RNA helicase [Bradyrhizobium sp. BTAi1]
gi|146410398|gb|ABQ38904.1| Putative ATP-dependent RNA helicase with P-loop hydrolase domain
(rhlE gene) [Bradyrhizobium sp. BTAi1]
Length = 469
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + FN+ + + RAL ++ + TPT IQ+ +P AL R D++G A+TG+GKT +F +P
Sbjct: 1 MTSFQDFNLADALTRALKEENYTTPTPIQAQTIPIALQGR-DVIGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|315634792|ref|ZP_07890074.1| ATP-dependent RNA helicase DeaD [Aggregatibacter segnis ATCC
33393]
gi|315476344|gb|EFU67094.1| ATP-dependent RNA helicase DeaD [Aggregatibacter segnis ATCC
33393]
Length = 600
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 6/69 (8%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL I
Sbjct: 11 LGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFSLPILAQI- 68
Query: 67 NKLENPTEE 75
+PTE+
Sbjct: 69 ----DPTEK 73
>gi|302407546|ref|XP_003001608.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
gi|261359329|gb|EEY21757.1| ATP-dependent RNA helicase MAK5 [Verticillium albo-atrum VaMs.102]
Length = 787
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EW+ N+ I + + F PT IQ +P + A D++G A TGSGKTLAFGIP
Sbjct: 223 MSEWMGLNLSPATIATIRRLKFTKPTTIQCAAIPH-IQAGHDVIGKASTGSGKTLAFGIP 281
Query: 61 ILTGIVNKLENPTEED 76
I+ + K N E+D
Sbjct: 282 IVDKWLEK--NGEEQD 295
>gi|195475963|ref|XP_002090252.1| GE12898 [Drosophila yakuba]
gi|194176353|gb|EDW89964.1| GE12898 [Drosophila yakuba]
Length = 522
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + ET+ +A + +++P+KIQ +P AL KD++G AETGSGKT AF +PIL
Sbjct: 70 WKDLGLNETLCQACDELKWRSPSKIQREAIPVALQG-KDVIGLAETGSGKTGAFALPILH 128
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 129 AL---LENP 134
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 421 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 479
Query: 64 GIVNK 68
I+++
Sbjct: 480 HIMDQ 484
>gi|440469812|gb|ELQ38909.1| ATP-dependent RNA helicase mak5 [Magnaporthe oryzae Y34]
Length = 760
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++EW + E I+ ++ + F PT IQ+ +P +LA D+VG A TGSGKTLAFGIP
Sbjct: 186 VSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPE-ILAGHDVVGKASTGSGKTLAFGIP 244
Query: 61 IL 62
I+
Sbjct: 245 IV 246
>gi|376284519|ref|YP_005157729.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae 31A]
gi|371578034|gb|AEX41702.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae 31A]
Length = 680
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|387874673|ref|YP_006304977.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. MOTT36Y]
gi|443304605|ref|ZP_21034393.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. H4Y]
gi|386788131|gb|AFJ34250.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. MOTT36Y]
gi|442766169|gb|ELR84163.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium sp. H4Y]
Length = 567
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAVADVGYESPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|254819463|ref|ZP_05224464.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare ATCC 13950]
gi|379746016|ref|YP_005336837.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare ATCC 13950]
gi|378798380|gb|AFC42516.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare ATCC 13950]
Length = 567
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAVADVGYESPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|407775396|ref|ZP_11122691.1| DEAD/DEAH box helicase [Thalassospira profundimaris WP0211]
gi|407281821|gb|EKF07382.1| DEAD/DEAH box helicase [Thalassospira profundimaris WP0211]
Length = 623
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + E I++A+ G+ TPT IQ+ +PS L+AR DI+G A+TG+GKT +F +P+L
Sbjct: 3 FADLGLSEDILKAVADAGYDTPTPIQAQAIPSVLMAR-DILGCAQTGTGKTASFTLPML 60
>gi|379753312|ref|YP_005341984.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-02]
gi|379760733|ref|YP_005347130.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-64]
gi|406029614|ref|YP_006728505.1| Cold-shock DEAD box protein A -like protein [Mycobacterium
indicus pranii MTCC 9506]
gi|378803528|gb|AFC47663.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-02]
gi|378808675|gb|AFC52809.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium intracellulare MOTT-64]
gi|405128161|gb|AFS13416.1| Cold-shock DEAD box protein A -like protein [Mycobacterium
indicus pranii MTCC 9506]
Length = 567
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPSVLRAVADVGYESPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|367019066|ref|XP_003658818.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
gi|347006085|gb|AEO53573.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
Length = 707
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + N+P ++ ++ G+ PT IQ +P AL AR D++G A TGSGKT AF +P
Sbjct: 270 MRSWEESNLPRRLLDIVHSVGYDEPTPIQRAAIPIALQAR-DLIGVAVTGSGKTAAFLLP 328
Query: 61 ILTGIVNKLENPTEEDEND 79
+L +++L TE ++ND
Sbjct: 329 LLV-YISELPPLTEYNKND 346
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|157413572|ref|YP_001484438.1| putative ATP-dependent RNA helicase [Prochlorococcus marinus str.
MIT 9215]
gi|157388147|gb|ABV50852.1| putative ATP-dependent RNA helicase [Prochlorococcus marinus str.
MIT 9215]
Length = 593
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ F ++I+ +L KG+K PT IQ +P +L R D++G A+TG+GKT AF +P++
Sbjct: 53 FLDFGFNQSILNSLINKGYKNPTPIQKAAIPELMLGR-DLLGQAQTGTGKTAAFALPLIE 111
Query: 64 GIVNKLE 70
+ N E
Sbjct: 112 KLTNNKE 118
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|126136425|ref|XP_001384736.1| ATP-dependent RNA helicase DBP9 (DEAD-box protein 9)
[Scheffersomyces stipitis CBS 6054]
gi|146286107|sp|A3LV40.1|DBP9_PICST RecName: Full=ATP-dependent RNA helicase DBP9
gi|126091958|gb|ABN66707.1| ATP-dependent RNA helicase DBP9 (DEAD-box protein 9)
[Scheffersomyces stipitis CBS 6054]
Length = 581
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
+ W F++ +++A+ Q GF+ PT IQ+ +P AL ++DI+ A TGSGKT A+ IPI
Sbjct: 15 SSWDSFHLDARLVQAIDQLGFEHPTLIQASAIPLALEEKRDIIAKASTGSGKTGAYVIPI 74
Query: 62 LTGIV 66
+ ++
Sbjct: 75 IHNLL 79
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ I+ + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+LT
Sbjct: 388 WSETGFPKEILDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGIAETGSGKTLAFLIPLLT 446
Query: 64 GI 65
I
Sbjct: 447 WI 448
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|19114126|ref|NP_593214.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351656|sp|Q09903.1|DRS1_SCHPO RecName: Full=ATP-dependent RNA helicase drs1
gi|1065890|emb|CAA91889.1| ATP-dependent RNA helicase Ddx27/Drs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
+ + N+ I++ L GF+ PT+IQ +P ALL KDIVGAA TGSGKT AF +PI
Sbjct: 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLG-KDIVGAAVTGSGKTAAFIVPI 317
Query: 62 LTGIVNK 68
L ++ +
Sbjct: 318 LERLLYR 324
>gi|409046062|gb|EKM55542.1| hypothetical protein PHACADRAFT_173680 [Phanerochaete carnosa
HHB-10118-sp]
Length = 668
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +IP+ ++ + + G+K P+ IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 240 LRSWTESDIPQLLLDVIERIGYKEPSPIQRQAIPIGLQNR-DIIGIAETGSGKTAAFVIP 298
Query: 61 ILTGIVNKLENPTEEDEN 78
+L+ ++KL P DEN
Sbjct: 299 MLS-FISKL--PLFTDEN 313
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|376254085|ref|YP_005142544.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae PW8]
gi|372117169|gb|AEX69639.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae PW8]
Length = 705
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|376287519|ref|YP_005160085.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae BH8]
gi|371584853|gb|AEX48518.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae BH8]
Length = 680
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|254476796|ref|ZP_05090182.1| ATP-dependent RNA helicase RhlE [Ruegeria sp. R11]
gi|214031039|gb|EEB71874.1| ATP-dependent RNA helicase RhlE [Ruegeria sp. R11]
Length = 447
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M E+ +PE ++ + + GFK PT IQ+ +P AL KD++G A+TG+GKT AFG+P
Sbjct: 1 MTEFSTMGLPEKLLSRIDEMGFKEPTPIQARAIPHALNG-KDVLGLAQTGTGKTAAFGVP 59
Query: 61 ILTGIVNKLENP 72
++ ++ P
Sbjct: 60 LIAQMMQYGRKP 71
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|455650274|gb|EMF29057.1| ATP-dependent RNA helicase [Streptomyces gancidicus BKS 13-15]
Length = 459
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE+++R L + G + P IQ+ +P AL R ++G TGSGKTLAFG+P+LT
Sbjct: 17 FAALGLPESVLRTLDRLGVREPFPIQAATLPDALRGRH-VLGRGRTGSGKTLAFGLPLLT 75
Query: 64 GIVNKLENPTE 74
+ P +
Sbjct: 76 RSAGRRAEPKQ 86
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 225 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 283
Query: 64 GIVNK 68
I+++
Sbjct: 284 HIMDQ 288
>gi|395817878|ref|XP_003804109.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Otolemur garnettii]
Length = 941
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 336 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 394
Query: 64 GIVNK 68
I+++
Sbjct: 395 HIMDQ 399
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|432866547|ref|XP_004070857.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Oryzias
latipes]
Length = 802
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++ +P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 375 WKEYALPAHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 433
Query: 64 GI 65
I
Sbjct: 434 WI 435
>gi|38233613|ref|NP_939380.1| DEAD/DEAH box helicase [Corynebacterium diphtheriae NCTC 13129]
gi|376242613|ref|YP_005133465.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae CDCE 8392]
gi|38199873|emb|CAE49539.1| DEAD-box helicase [Corynebacterium diphtheriae]
gi|372105855|gb|AEX71917.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae CDCE 8392]
Length = 680
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|260904108|ref|ZP_05912430.1| DNA/RNA helicase, superfamily II [Brevibacterium linens BL2]
Length = 489
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + + I+ AL KG P IQ+M +P AL + DI+G A+TG+GKTL FGIP+L
Sbjct: 7 DFAELGVAGPIVAALAAKGITHPFPIQAMTLPVAL-SGADIIGQAKTGTGKTLGFGIPLL 65
Query: 63 TGIVNKLEN 71
+V K E+
Sbjct: 66 QRVVGKNED 74
>gi|383826631|ref|ZP_09981754.1| cold-shock DEAD-box protein, DeaD [Mycobacterium xenopi
RIVM700367]
gi|383332437|gb|EID10918.1| cold-shock DEAD-box protein, DeaD [Mycobacterium xenopi
RIVM700367]
Length = 566
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 1/64 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + I +++RA+ + G+++P+ IQ+ +P AL+A D+VG A+TG+GKT AF IPI
Sbjct: 13 AAFDDLQIHPSVLRAIAEVGYESPSAIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPI 71
Query: 62 LTGI 65
L+ I
Sbjct: 72 LSRI 75
>gi|376248300|ref|YP_005140244.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC04]
gi|376251090|ref|YP_005137971.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC03]
gi|376256907|ref|YP_005144798.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae VA01]
gi|372112594|gb|AEX78653.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC03]
gi|372114868|gb|AEX80926.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC04]
gi|372119424|gb|AEX83158.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae VA01]
Length = 682
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|145219994|ref|YP_001130703.1| DEAD/DEAH box helicase [Chlorobium phaeovibrioides DSM 265]
gi|145206158|gb|ABP37201.1| ATP-dependent RNA helicase CsdA [Chlorobium phaeovibrioides DSM
265]
Length = 598
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ + N+ E ++RAL G++TPT IQ+ +P L+ +D++G A+TG+GKT AF +P
Sbjct: 9 ISSFTDLNLAEPVLRALADVGYETPTPIQARTIP-LLIEGRDVLGQAQTGTGKTAAFALP 67
Query: 61 ILTGI 65
IL+ I
Sbjct: 68 ILSNI 72
>gi|348502929|ref|XP_003439019.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Oreochromis
niloticus]
Length = 806
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++ +P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 379 WKEYPLPAHILEVIDKCGYKDPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 437
Query: 64 GI 65
I
Sbjct: 438 WI 439
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|296139030|ref|YP_003646273.1| DEAD/DEAH box helicase [Tsukamurella paurometabola DSM 20162]
gi|296027164|gb|ADG77934.1| DEAD/DEAH box helicase domain protein [Tsukamurella paurometabola
DSM 20162]
Length = 602
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ I E ++RAL + G++ P+ IQ+ +P LLA D+VG A+TG+GKT AF +P+L+
Sbjct: 30 FLDLGIDERVLRALAEVGYENPSPIQAATIPP-LLAGNDVVGLAQTGTGKTAAFAVPVLS 88
Query: 64 GIVNKLENP 72
I + P
Sbjct: 89 KIDGESRTP 97
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 400 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 458
Query: 64 GIVNK 68
I+++
Sbjct: 459 HIMDQ 463
>gi|336125600|ref|YP_004577556.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
gi|335343317|gb|AEH34599.1| ATP-dependent RNA helicase [Vibrio anguillarum 775]
Length = 421
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + + T++ AL GF+ PT +QS +P +LA KD++ A+TG+GKT AFG+PIL
Sbjct: 8 FQRLGLSTTLVSALQSLGFEQPTDVQSQAIPH-VLAGKDVMAGAQTGTGKTAAFGLPILQ 66
Query: 64 GIVNKLENPTEEDENDSARKDIV 86
L+N E + N + +V
Sbjct: 67 RF---LDNQAEREANSKVVRALV 86
>gi|419860593|ref|ZP_14383234.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|387982987|gb|EIK56486.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 667
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|91773889|ref|YP_566581.1| DEAD/DEAH box helicase-like protein [Methanococcoides burtonii
DSM 6242]
gi|9581858|gb|AAF89099.1|AF199442_1 DEAD-box RNA helicase [Methanococcoides burtonii]
gi|91712904|gb|ABE52831.1| Dead box RNA helicase [Methanococcoides burtonii DSM 6242]
Length = 522
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + K I + I+R++ K F+ PT+IQ M +P +L KDI+G A TGSGKTLAFG
Sbjct: 1 MESFKKLGIEDAILRSIEDKKFEEPTEIQKMAIP-LILEGKDIIGGAATGSGKTLAFG-- 57
Query: 61 ILTGIVNKLE 70
GI+ K+E
Sbjct: 58 --CGIIQKIE 65
>gi|39104531|dbj|BAC98030.2| mKIAA0801 protein [Mus musculus]
Length = 1044
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 391 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 449
Query: 64 GIVNK 68
I+++
Sbjct: 450 HIMDQ 454
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 645 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 703
Query: 64 GIVNK 68
I+++
Sbjct: 704 HIMDQ 708
>gi|405979826|ref|ZP_11038167.1| hypothetical protein HMPREF9241_00890 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404391201|gb|EJZ86265.1| hypothetical protein HMPREF9241_00890 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 753
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +P I+ A+ Q GF TPT IQ +PS LL D+VG A+TG+GKT AFG+P+L
Sbjct: 67 FADLGLPNEILDAVTQMGFVTPTPIQEKAIPS-LLELNDVVGIAQTGTGKTAAFGLPML 124
>gi|388851950|emb|CCF54306.1| related to DBP8-ATP-dependent RNA helicase [Ustilago hordei]
Length = 532
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + I +IR+L K PT IQS+ +PS L R D+VG A+TGSGKTL F +PI
Sbjct: 39 ASFSSIGISPMLIRSLASLQIKVPTPIQSLTIPSVLEGR-DLVGGAQTGSGKTLCFALPI 97
Query: 62 LTGIVNKL 69
L ++ +
Sbjct: 98 LNRLLKDM 105
>gi|340719056|ref|XP_003397973.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
terrestris]
Length = 458
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W I +T+ + +K+PTKIQ +P L KDI+G AETGSGKT AF IPIL
Sbjct: 25 WKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEG-KDIIGLAETGSGKTAAFAIPILQ 83
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 84 AL---LENP 89
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 37/85 (43%), Gaps = 39/85 (45%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KDI+G AETGSGKT AF IPIL + LENP
Sbjct: 61 KDIIGLAETGSGKTAAFAIPILQAL---LENP---------------------------- 89
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
+ +ALIL PTRELA Q
Sbjct: 90 --------QRYFALILTPTRELAFQ 106
>gi|167761792|ref|ZP_02433919.1| hypothetical protein BACSTE_00133 [Bacteroides stercoris ATCC
43183]
gi|167700298|gb|EDS16877.1| DEAD/DEAH box helicase [Bacteroides stercoris ATCC 43183]
Length = 372
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI E I++A+ +KG+ PT IQ +P+AL KDI+G A+TG+GKT AF IPI+
Sbjct: 6 LNITEPILKAIEEKGYANPTPIQVKAIPAALTG-KDILGCAQTGTGKTAAFAIPII 60
>gi|403222338|dbj|BAM40470.1| ATP-dependent RNA helicase [Theileria orientalis strain Shintoku]
Length = 470
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 40/59 (67%), Gaps = 2/59 (3%)
Query: 10 PETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
PE + RA Q G+K PTKIQ +P AL KDI+G AETGSGKT AF IPIL ++ K
Sbjct: 64 PE-LCRACKQLGWKRPTKIQVEAIPVALQG-KDIIGLAETGSGKTAAFTIPILQKLLEK 120
>gi|319408783|emb|CBI82440.1| ATP-dependent RNA helicase [Bartonella schoenbuchensis R1]
Length = 454
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++K IP + L+ G P IQ +P +L ++DI+G A+TGSGKTLAFG+P+L+
Sbjct: 8 FIKLGIPTLLTENLFIAGINKPKPIQKQAIP-VMLKKRDILGIAQTGSGKTLAFGLPVLS 66
Query: 64 GIV 66
I+
Sbjct: 67 QIL 69
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 34/86 (39%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
++DI+G A+TGSGKTLAFG+P+L+ I+ +
Sbjct: 43 KRDILGIAQTGSGKTLAFGLPVLSQIL------------------------------ALG 72
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
+ K R ALIL PTRELA+Q
Sbjct: 73 DKRYPKTAR----ALILVPTRELAVQ 94
>gi|400536166|ref|ZP_10799701.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium colombiense CECT 3035]
gi|400330248|gb|EJO87746.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium colombiense CECT 3035]
Length = 567
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I +++RA+ G+++PT IQ+ +P AL+A D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQINPSVLRAIADVGYESPTGIQAATIP-ALMAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|154508882|ref|ZP_02044524.1| hypothetical protein ACTODO_01393 [Actinomyces odontolyticus ATCC
17982]
gi|153798516|gb|EDN80936.1| DEAD/DEAH box helicase [Actinomyces odontolyticus ATCC 17982]
Length = 722
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +PE I+ A+ GF+ PT IQ+ +P LL +D+VG A+TG+GKT AFG+P+L
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPP-LLELRDVVGIAQTGTGKTAAFGLPLL 104
>gi|84994532|ref|XP_951988.1| ATP-dependent RNA helicase [Theileria annulata strain Ankara]
gi|65302149|emb|CAI74256.1| ATP-dependent RNA helicase, putative [Theileria annulata]
Length = 455
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
+ RA + G+KTPTKIQ +P AL + KDI+G AETGSGKT AF IPIL ++ K
Sbjct: 52 LCRACKELGWKTPTKIQIEAIPIAL-SGKDIIGLAETGSGKTAAFTIPILQKLLEK 106
>gi|395784104|ref|ZP_10463943.1| hypothetical protein ME3_00599 [Bartonella melophagi K-2C]
gi|395423859|gb|EJF90047.1| hypothetical protein ME3_00599 [Bartonella melophagi K-2C]
Length = 454
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++K IP + L+ G P IQ +P +L ++DI+G A+TGSGKTLAFG+P+L+
Sbjct: 8 FIKLGIPTLLTENLFIAGINKPKPIQKQAIP-VMLKKRDILGIAQTGSGKTLAFGLPVLS 66
Query: 64 GIV 66
I+
Sbjct: 67 QIL 69
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 34/86 (39%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
++DI+G A+TGSGKTLAFG+P+L+ I+ +
Sbjct: 43 KRDILGIAQTGSGKTLAFGLPVLSQIL------------------------------ALG 72
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
+ K R ALIL PTRELA+Q
Sbjct: 73 DKRYPKTAR----ALILVPTRELAVQ 94
>gi|375290654|ref|YP_005125194.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae 241]
gi|376245487|ref|YP_005135726.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC01]
gi|371580325|gb|AEX43992.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae 241]
gi|372108117|gb|AEX74178.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae HC01]
Length = 679
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|398411885|ref|XP_003857276.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
gi|339477161|gb|EGP92252.1| hypothetical protein MYCGRDRAFT_33937 [Zymoseptoria tritici IPO323]
Length = 1145
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + P +I + ++ F+ PT IQS +P AL++ +D +G A+TGSGKTLAF +P
Sbjct: 496 ITKWSQCGFPAQVIEVINEQKFENPTAIQSQALP-ALMSGRDTIGIAKTGSGKTLAFILP 554
Query: 61 ILTGI-----VNKLENP 72
+ I V LE P
Sbjct: 555 MFRHIKDQRPVANLEGP 571
>gi|386775346|ref|ZP_10097724.1| DNA/RNA helicase, superfamily II [Brachybacterium paraconglomeratum
LC44]
Length = 633
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
++P + RA+ + GF TP+ IQ+ +PS LL +D++G A+TG+GKT AFG+P+L +
Sbjct: 56 IDLPAPLRRAVDELGFTTPSAIQAQAIPS-LLEGRDVIGVAQTGTGKTAAFGLPLLAAV 113
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 185 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 243
Query: 64 GIVNK 68
I+++
Sbjct: 244 HIMDQ 248
>gi|333025550|ref|ZP_08453614.1| putative ATP-dependent RNA helicase [Streptomyces sp. Tu6071]
gi|332745402|gb|EGJ75843.1| putative ATP-dependent RNA helicase [Streptomyces sp. Tu6071]
Length = 734
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE I+R L Q G +P IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 53 FAELGLPENIVRKLTQNGVTSPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLLA 111
Query: 64 GI 65
+
Sbjct: 112 SL 113
>gi|150017770|ref|YP_001310024.1| DEAD/DEAH box helicase [Clostridium beijerinckii NCIMB 8052]
gi|149904235|gb|ABR35068.1| DEAD/DEAH box helicase domain protein [Clostridium beijerinckii
NCIMB 8052]
Length = 524
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + + E I++A+ GF+ P+KIQ+ V+P LL D++G A+TG+GKTLAFG P+L+
Sbjct: 6 FSELGLDENILKAIDAMGFEEPSKIQAEVIP-VLLEGHDVIGQAQTGTGKTLAFGAPVLS 64
Query: 64 GI 65
I
Sbjct: 65 RI 66
>gi|409083036|gb|EKM83393.1| hypothetical protein AGABI1DRAFT_65941 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 602
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ +IPE + A GFK P+ IQ+ P AL R D+VG AETGSGKTLAFGIP L+ +
Sbjct: 159 QLSIPEGLRTAF--TGFKEPSPIQACTWPPALDGR-DVVGIAETGSGKTLAFGIPALSRL 215
Query: 66 VN 67
+
Sbjct: 216 IQ 217
>gi|375292864|ref|YP_005127403.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae INCA 402]
gi|371582535|gb|AEX46201.1| ATP-dependent RNA helicase [Corynebacterium diphtheriae INCA 402]
Length = 676
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 72 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMQGHDVMGLAQTGTGKTAAFALPILSRID 130
Query: 67 NKLENP 72
K +P
Sbjct: 131 VKKRHP 136
>gi|328860816|gb|EGG09921.1| hypothetical protein MELLADRAFT_34213 [Melampsora larici-populina
98AG31]
Length = 525
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLA--RKDIVGAAETGSGKTLAFGIPI 61
W +P + A++ F PT +Q +P +L + +D+V AETGSGKTLA+ IPI
Sbjct: 9 WSHHQLPSVLKHAIHTLSFDKPTPVQDATLPISLSSTPSRDLVAIAETGSGKTLAYAIPI 68
Query: 62 LTGIVNKLENPTEEDEND 79
+ +++ L+ PT D D
Sbjct: 69 INSLLDSLKLPTSPDCPD 86
>gi|198474199|ref|XP_001356589.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
gi|198138291|gb|EAL33653.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 402 WNESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 460
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I + K+E + D+ A I+ A A+ +T+ FG P+
Sbjct: 461 WIQSLPKIERLEDVDQGPYA---IIMAPTRELAQQIEEETIKFGQPL 504
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 702 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 760
Query: 64 GIVNK 68
I+++
Sbjct: 761 HIMDQ 765
>gi|385678453|ref|ZP_10052381.1| ATP-dependent RNA helicase [Amycolatopsis sp. ATCC 39116]
Length = 458
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ N+PE ++ AL + G P IQS +P AL R D++G A+TGSGKTLAFG+ +L
Sbjct: 13 SFADLNLPEPLLGALRKAGIDAPFPIQSATLPDALAGR-DVLGRAQTGSGKTLAFGLALL 71
>gi|124485198|ref|YP_001029814.1| hypothetical protein Mlab_0371 [Methanocorpusculum labreanum Z]
gi|124362739|gb|ABN06547.1| DEAD/DEAH box helicase domain protein [Methanocorpusculum
labreanum Z]
Length = 656
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +F I E +++A+ GF+ PT IQ+M +P +L KD+ G A+TG+GKT AFGIPI+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQ-ILDGKDVTGQAQTGTGKTAAFGIPII 64
>gi|392957192|ref|ZP_10322716.1| DEAD/DEAH box helicase [Bacillus macauensis ZFHKF-1]
gi|391876599|gb|EIT85195.1| DEAD/DEAH box helicase [Bacillus macauensis ZFHKF-1]
Length = 431
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ NI +I AL ++GFK PT IQ V+P +L DI+G ++TGSGKT+AF +PIL I
Sbjct: 9 RLNIQPFLIEALVEQGFKKPTDIQERVVP-GILNGYDIIGQSQTGSGKTMAFLLPILNKI 67
>gi|119582643|gb|EAW62239.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_b [Homo
sapiens]
Length = 471
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 326 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 384
Query: 64 GIVNK 68
I+++
Sbjct: 385 HIMDQ 389
>gi|384486962|gb|EIE79142.1| hypothetical protein RO3G_03847 [Rhizopus delemar RA 99-880]
Length = 541
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 8 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
N P +++ L Q GF +PT IQS P AL R D+VG AETGSGKTLA+ +P + I
Sbjct: 228 NFPSYVMQELAQLGFPSPTPIQSQGWPMALSGR-DVVGVAETGSGKTLAYTLPAIVHI 284
>gi|342320678|gb|EGU12617.1| Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Rhodotorula
glutinis ATCC 204091]
Length = 903
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP+ I+ A+ + G+K P+ IQ +P L R D++G AETGSGKT AF IP
Sbjct: 464 LRSWKESKIPQPILEAIEEIGYKEPSPIQRQAIPIGLQNR-DMIGIAETGSGKTAAFTIP 522
Query: 61 ILTGIVNKLENPTEEDENDS 80
+L I P DEN S
Sbjct: 523 MLAYIARL---PPLSDENRS 539
>gi|293192664|ref|ZP_06609618.1| ATP-dependent RNA helicase DeaD [Actinomyces odontolyticus F0309]
gi|292820171|gb|EFF79168.1| ATP-dependent RNA helicase DeaD [Actinomyces odontolyticus F0309]
Length = 722
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +PE I+ A+ GF+ PT IQ+ +P LL +D+VG A+TG+GKT AFG+P+L
Sbjct: 47 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPP-LLELRDVVGIAQTGTGKTAAFGLPLL 104
>gi|119946809|ref|YP_944489.1| ATP-dependent RNA helicase [Psychromonas ingrahamii 37]
gi|119865413|gb|ABM04890.1| ATP-dependent RNA helicase CsdA [Psychromonas ingrahamii 37]
Length = 581
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ + + N+PE + + + + G++TP+ IQ+ +P LL KD++G A+TG+GKT AF +P
Sbjct: 13 LPNFTELNLPEALTKVVSELGYETPSPIQAQCIP-LLLEGKDVLGLAQTGTGKTAAFALP 71
Query: 61 ILTGIVNKLENP 72
+L I L P
Sbjct: 72 LLANIDINLNQP 83
>gi|443242157|ref|YP_007375382.1| ATP-dependent RNA helicase [Nonlabens dokdonensis DSW-6]
gi|442799556|gb|AGC75361.1| ATP-dependent RNA helicase [Nonlabens dokdonensis DSW-6]
Length = 425
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
E I+RAL +G++ PT IQ+ +P LL KD++G A+TG+GKT AF IPI+ + N+
Sbjct: 10 EPILRALQDQGYERPTPIQAQAIP-VLLEGKDLLGCAQTGTGKTAAFSIPIVQDLYNR 66
>gi|340923930|gb|EGS18833.1| hypothetical protein CTHT_0054430 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 709
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + +P ++ +Y+ G+ PT IQ +P AL AR D++G A TGSGKT AF +P
Sbjct: 275 MRNWEESGLPRRLLDIVYRVGYDEPTPIQRAAIPIALQAR-DLIGVAVTGSGKTAAFLLP 333
Query: 61 ILTGIVNKLENPTEEDEND 79
+L +++L TE ++ND
Sbjct: 334 LLV-YISELPPLTEYNKND 351
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 522 WVQCGISMKILNSLKKHGYEKPTPIQAQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 580
Query: 64 GIVNK 68
I+++
Sbjct: 581 HIMDQ 585
>gi|396583986|ref|ZP_10484488.1| DEAD/DEAH box helicase [Actinomyces sp. ICM47]
gi|395548411|gb|EJG15674.1| DEAD/DEAH box helicase [Actinomyces sp. ICM47]
Length = 734
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +PE I+ A+ GF+ PT IQ+ +P LL +D+VG A+TG+GKT AFG+P+L
Sbjct: 54 FASLGLPEEILAAVTDMGFRVPTPIQAAAIPP-LLELRDVVGIAQTGTGKTAAFGLPLL 111
>gi|119186507|ref|XP_001243860.1| hypothetical protein CIMG_03301 [Coccidioides immitis RS]
gi|118595360|sp|Q1E2B2.1|DRS1_COCIM RecName: Full=ATP-dependent RNA helicase DRS1
gi|392870577|gb|EAS32387.2| ATP-dependent RNA helicase DRS1 [Coccidioides immitis RS]
Length = 840
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L GF PT IQ +P LL KD+VG A TGSGKT AF IPIL
Sbjct: 324 FNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLG-KDLVGGAVTGSGKTAAFIIPIL 378
>gi|150016695|ref|YP_001308949.1| DEAD/DEAH box helicase [Clostridium beijerinckii NCIMB 8052]
gi|149903160|gb|ABR33993.1| DEAD/DEAH box helicase domain protein [Clostridium beijerinckii
NCIMB 8052]
Length = 480
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
E+ KF I + I++++ G+K P+K+Q V+P LL KDI+ ++TGSGKT AFGIP+
Sbjct: 4 EFTKFKISDEILKSIEGLGYKNPSKVQEKVIPEILL-NKDIIVKSQTGSGKTAAFGIPLC 62
>gi|449297073|gb|EMC93092.1| hypothetical protein BAUCODRAFT_77654 [Baudoinia compniacensis UAMH
10762]
Length = 496
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + E++ A GFKTPT IQ +P AL R DI+G AETGSGKT AF +PIL
Sbjct: 60 FADLGVNESLCDACTSLGFKTPTAIQREAIPLALSGR-DIIGLAETGSGKTAAFALPILQ 118
Query: 64 GIVN 67
+++
Sbjct: 119 ALLH 122
>gi|258563228|ref|XP_002582359.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
gi|237907866|gb|EEP82267.1| hypothetical protein UREG_07132 [Uncinocarpus reesii 1704]
Length = 836
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L GF PT IQ +P LL KD+VG A TGSGKT AF IPIL
Sbjct: 317 FNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLG-KDLVGGAVTGSGKTAAFIIPIL 371
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P II + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 411 WSESGFPPEIIEIIDSVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 469
Query: 64 GI 65
I
Sbjct: 470 WI 471
>gi|395815581|ref|XP_003781304.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Otolemur garnettii]
Length = 872
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 215 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 273
Query: 64 GIVNK 68
I+++
Sbjct: 274 HIMDQ 278
>gi|330465173|ref|YP_004402916.1| DEAD/DEAH box helicase domain-containing protein [Verrucosispora
maris AB-18-032]
gi|328808144|gb|AEB42316.1| DEAD/DEAH box helicase domain-containing protein [Verrucosispora
maris AB-18-032]
Length = 572
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
+PE + RAL ++G TP +IQ +P AL R D++G +TGSGKTLAFG+P+L I +
Sbjct: 41 LPEPLARALARQGITTPFEIQRATVPDALAGR-DVLGRGQTGSGKTLAFGLPLLARIAD 98
>gi|195579916|ref|XP_002079802.1| GD24145 [Drosophila simulans]
gi|194191811|gb|EDX05387.1| GD24145 [Drosophila simulans]
Length = 641
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 215 WNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 273
Query: 64 GI 65
I
Sbjct: 274 WI 275
>gi|16768302|gb|AAL28370.1| GM01081p [Drosophila melanogaster]
Length = 641
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P+ II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 215 WNESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 273
Query: 64 GI 65
I
Sbjct: 274 WI 275
>gi|452990332|emb|CCQ98554.1| putative ATP-dependent RNA helicase [Clostridium ultunense Esp]
Length = 535
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + +F I + I++A+ + GF+ P+ IQS +P +L D++G A+TG+GKT AFGIP
Sbjct: 12 MSSFQEFKIDQAILKAIQEMGFEEPSPIQSACIPK-ILEGFDVIGQAQTGTGKTAAFGIP 70
Query: 61 IL 62
I+
Sbjct: 71 IV 72
>gi|395334307|gb|EJF66683.1| DEAD-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 773
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ N+ II++L GF TPT IQ+ +P ALL KD+VG A TGSGKT AF IP+L
Sbjct: 189 FLSMNLSRPIIKSLTTLGFTTPTPIQAATIPVALLG-KDVVGNAVTGSGKTAAFIIPMLE 247
Query: 64 GIVNK 68
++ +
Sbjct: 248 RLMYR 252
>gi|395736192|ref|XP_003780666.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Pongo abelii]
Length = 1014
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 354 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 412
Query: 64 GIVNK 68
I+++
Sbjct: 413 HIMDQ 417
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+ E + A Q G+K+PTKIQ +P AL KD++G AETGSGKT AF +PIL ++
Sbjct: 2 VTEVLCEACDQLGWKSPTKIQIEAIPVALQG-KDVIGLAETGSGKTGAFALPILQSLL 58
>gi|408679572|ref|YP_006879399.1| putative ATP-dependent RNA helicase [Streptomyces venezuelae ATCC
10712]
gi|328883901|emb|CCA57140.1| putative ATP-dependent RNA helicase [Streptomyces venezuelae ATCC
10712]
Length = 772
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+PE ++R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 63 LPEGVVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLL 115
>gi|296808427|ref|XP_002844552.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
gi|238844035|gb|EEQ33697.1| ATP-dependent RNA helicase drs1 [Arthroderma otae CBS 113480]
Length = 807
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + ++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF +PI
Sbjct: 293 ASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTAAFIVPI 351
Query: 62 L 62
L
Sbjct: 352 L 352
>gi|238878470|gb|EEQ42108.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 581
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +I + ++ + Q G++ PT +Q +P AL ++D+VG AETGSGKTLAF IP+L
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLAL-KKRDVVGVAETGSGKTLAFLIPVLN 228
Query: 64 GIVNKLEN 71
I++ EN
Sbjct: 229 YILSIDEN 236
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 29/86 (33%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
++D+VG AETGSGKTLAF IP+L I++ DEN E
Sbjct: 205 KRDVVGVAETGSGKTLAFLIPVLNYILSI-------DENYLKYE---------------- 241
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
K N+ LILAPTRELA+Q
Sbjct: 242 ------KISNEPVGLILAPTRELALQ 261
>gi|427391479|ref|ZP_18885885.1| hypothetical protein HMPREF9233_01388 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732122|gb|EKU94934.1| hypothetical protein HMPREF9233_01388 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 567
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ F + E + RAL +G P IQ++ +P AL R DI+G A+TG+GKTL FGIP+L
Sbjct: 32 FADFGVSEEVTRALADEGIIHPFPIQALTLPVAL-DRHDIIGQAKTGTGKTLGFGIPML 89
>gi|374321245|ref|YP_005074374.1| ATP-dependent RNA helicase dbpA [Paenibacillus terrae HPL-003]
gi|357200254|gb|AET58151.1| ATP-dependent RNA helicase dbpA [Paenibacillus terrae HPL-003]
Length = 481
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + + E I+RAL G++TPT++Q+ V+P A L +KD+V ++TGSGKT ++GIP+
Sbjct: 5 HFTDYRLSEEIVRALDSLGYETPTEVQTKVIPVA-LEKKDLVAKSQTGSGKTASYGIPLC 63
>gi|335040306|ref|ZP_08533437.1| DEAD/DEAH box helicase domain protein [Caldalkalibacillus
thermarum TA2.A1]
gi|334179782|gb|EGL82416.1| DEAD/DEAH box helicase domain protein [Caldalkalibacillus
thermarum TA2.A1]
Length = 457
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + NI E + RAL + GF+ T IQ+ +P AL +D++G A+TG+GKT AFGIP
Sbjct: 1 MTHFQALNISEPVKRALAKMGFEEATPIQAEAIPLALKG-QDLIGQAQTGTGKTAAFGIP 59
Query: 61 ILTGI 65
++ GI
Sbjct: 60 MIEGI 64
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ AL + G++ PT IQ+ +P A++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILTALKKHGYEKPTPIQTQAIP-AIMNGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>gi|390339167|ref|XP_789805.2| PREDICTED: probable ATP-dependent RNA helicase DDX23
[Strongylocentrotus purpuratus]
Length = 785
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 11/123 (8%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++ +P+ I + + G+K P+ IQ +P L R D++G AETGSGKT AF IP+L
Sbjct: 358 WDEYGLPKHITDIIAEVGYKDPSPIQRQAIPIGLQNR-DVIGVAETGSGKTAAFLIPLLV 416
Query: 64 GI--VNKLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPILTGIVNKLENPTE 116
I + K+E ++D+ A I+ A A+ +T+ FG P+ V + +
Sbjct: 417 WISTLPKIERDEDKDQGPYA---IILAPTRELAQQIEEETIKFGKPLGIRTVTIIGGISR 473
Query: 117 EDE 119
ED+
Sbjct: 474 EDQ 476
>gi|422336696|ref|ZP_16417669.1| cold-shock DEAD box protein A [Aggregatibacter aphrophilus F0387]
gi|353346008|gb|EHB90295.1| cold-shock DEAD box protein A [Aggregatibacter aphrophilus F0387]
Length = 600
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FADLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFSLPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|150400366|ref|YP_001324133.1| DEAD/DEAH box helicase domain-containing protein [Methanococcus
vannielii SB]
gi|150013069|gb|ABR55521.1| DEAD/DEAH box helicase domain protein [Methanococcus vannielii
SB]
Length = 538
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + E II AL +KGF PT IQ +P + DIVG A+TG+GKT AFG+P
Sbjct: 1 MDSFRNLGLSEDIINALEKKGFTEPTPIQEKAIPILIKGEMDIVGQAQTGTGKTAAFGLP 60
Query: 61 ILTGI 65
I+ I
Sbjct: 61 IIETI 65
>gi|23011993|ref|ZP_00052190.1| COG0513: Superfamily II DNA and RNA helicases [Magnetospirillum
magnetotacticum MS-1]
Length = 551
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ ++ F + E I+RAL + G+ +PT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 39 LTQFTDFGLAEPILRALGEAGYVSPTPIQTQALPPAMEGR-DLCGIAQTGTGKTAAFALP 97
Query: 61 IL 62
IL
Sbjct: 98 IL 99
>gi|374997699|ref|YP_004973198.1| DNA/RNA helicase [Desulfosporosinus orientis DSM 765]
gi|357216065|gb|AET70683.1| DNA/RNA helicase, superfamily II [Desulfosporosinus orientis DSM
765]
Length = 500
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + + E+IIR++ GF+ T IQ +P A+ R D++G A+TG+GKT A+GIP
Sbjct: 1 MATFTDLGLSESIIRSIINMGFEETTPIQEQTIPIAMEGR-DLIGQAQTGTGKTAAYGIP 59
Query: 61 ILTGIVNKLEN 71
++ IV + E+
Sbjct: 60 LIERIVGQSEH 70
>gi|384222064|ref|YP_005613230.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum
USDA 6]
gi|354960963|dbj|BAL13642.1| dead-box ATP-dependent RNA helicase [Bradyrhizobium japonicum
USDA 6]
Length = 522
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F + E I RAL ++ + TPT IQ+ +P+AL R D+VG A+TG+GKT +F +P
Sbjct: 1 MTSFQDFGLAEPIARALAEENYVTPTPIQAQTIPTALTGR-DVVGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + ++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 373 WVQCGISMKILNSLKKHAYEKPTPIQAQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 431
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 432 HIMD--QRPLEEGE 443
>gi|68484469|ref|XP_713845.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
gi|68484548|ref|XP_713805.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|74656226|sp|Q59W52.1|PRP28_CANAL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|46435319|gb|EAK94703.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|46435361|gb|EAK94744.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
Length = 581
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +I + ++ + Q G++ PT +Q +P AL ++D+VG AETGSGKTLAF IP+L
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLAL-KKRDVVGVAETGSGKTLAFLIPVLN 228
Query: 64 GIVNKLEN 71
I++ EN
Sbjct: 229 YILSIDEN 236
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 29/86 (33%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
++D+VG AETGSGKTLAF IP+L I++ DEN E
Sbjct: 205 KRDVVGVAETGSGKTLAFLIPVLNYILSI-------DENYLKYE---------------- 241
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
K N+ LILAPTRELA+Q
Sbjct: 242 ------KISNEPVGLILAPTRELALQ 261
>gi|416893570|ref|ZP_11924720.1| ATP-dependent RNA helicase [Aggregatibacter aphrophilus ATCC
33389]
gi|347813860|gb|EGY30513.1| ATP-dependent RNA helicase [Aggregatibacter aphrophilus ATCC
33389]
Length = 600
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FADLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFSLPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|167585895|ref|ZP_02378283.1| DEAD/DEAH box helicase domain protein [Burkholderia ubonensis Bu]
Length = 487
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + +F + I++A+ ++G+ TPT IQ+ +P +LA +D++GAA+TG+GKT +F +PI
Sbjct: 11 ATFDQFGLAADILKAIAEQGYTTPTPIQAQAIP-VVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 62 LTGIV 66
L ++
Sbjct: 70 LQRLL 74
>gi|259488879|tpe|CBF88686.1| TPA: ATP-dependent RNA helicase (Drs1), putative (AFU_orthologue;
AFUA_1G14990) [Aspergillus nidulans FGSC A4]
Length = 814
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 300 FQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 357
>gi|251793160|ref|YP_003007888.1| cold-shock deAd box protein a [Aggregatibacter aphrophilus
NJ8700]
gi|247534555|gb|ACS97801.1| cold-shock deAd box protein a (atp-dependent rna helicasedead)
[Aggregatibacter aphrophilus NJ8700]
Length = 600
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FADLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFSLPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|84498694|ref|ZP_00997447.1| ATP-dependent RNA helicase [Janibacter sp. HTCC2649]
gi|84381031|gb|EAP96918.1| ATP-dependent RNA helicase [Janibacter sp. HTCC2649]
Length = 601
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + E ++RAL G++TP+ IQ+ +P ALLA + +VG A+TG+GKT AF +PIL+
Sbjct: 23 FSDLGLDERVLRALKDVGYETPSPIQAATIP-ALLAGRHVVGLAQTGTGKTAAFALPILS 81
Query: 64 GIVNKLENP 72
+ K + P
Sbjct: 82 RLDLKQKTP 90
>gi|220926974|ref|YP_002502276.1| DEAD/DEAH box helicase [Methylobacterium nodulans ORS 2060]
gi|219951581|gb|ACL61973.1| DEAD/DEAH box helicase domain protein [Methylobacterium nodulans
ORS 2060]
Length = 506
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++V F + I++AL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFVDFGLAAPIMKALAETGYVTPTPIQAQAVPPAMTGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + ++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 348 WVQCGISMKILNSLKKHAYEKPTPIQAQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 406
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 407 HIMD--QRPLEEGE 418
>gi|194759163|ref|XP_001961819.1| GF14739 [Drosophila ananassae]
gi|190615516|gb|EDV31040.1| GF14739 [Drosophila ananassae]
Length = 525
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +T+ +A + +K P+KIQ +P AL KD++G AETGSGKT AF +PIL
Sbjct: 73 WKDLGLNDTLCQACDELKWKAPSKIQREAIPVALQG-KDVIGLAETGSGKTGAFALPILH 131
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 132 AL---LENP 137
>gi|238484285|ref|XP_002373381.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|317140428|ref|XP_001818181.2| ATP-dependent RNA helicase drs1 [Aspergillus oryzae RIB40]
gi|91206589|sp|Q2UQI6.2|DRS1_ASPOR RecName: Full=ATP-dependent RNA helicase drs1
gi|220701431|gb|EED57769.1| ATP-dependent RNA helicase (Drs1), putative [Aspergillus flavus
NRRL3357]
gi|391871961|gb|EIT81110.1| ATP-dependent RNA helicase [Aspergillus oryzae 3.042]
Length = 820
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 307 FNLSRPILRGLAAVNFTNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 361
>gi|336320811|ref|YP_004600779.1| DEAD/DEAH box helicase domain protein [[Cellvibrio] gilvus ATCC
13127]
gi|336104392|gb|AEI12211.1| DEAD/DEAH box helicase domain protein [[Cellvibrio] gilvus ATCC
13127]
Length = 605
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ +P+ + RA+ GF TP+ IQ+ +P ALL+ +DIVG A+TG+GKT AFG+P+L +
Sbjct: 24 ELGLPDALHRAVASLGFVTPSAIQARAIP-ALLSGRDIVGVAQTGTGKTAAFGLPLLAAV 82
>gi|188581754|ref|YP_001925199.1| DEAD/DEAH box helicase [Methylobacterium populi BJ001]
gi|179345252|gb|ACB80664.1| DEAD/DEAH box helicase domain protein [Methylobacterium populi
BJ001]
Length = 506
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ F + + ++RAL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFTDFGLAQPVLRALEEAGYVTPTPIQAQAVPPAMEGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|402297853|ref|ZP_10817596.1| ATP-dependent RNA helicase [Bacillus alcalophilus ATCC 27647]
gi|401726922|gb|EJT00129.1| ATP-dependent RNA helicase [Bacillus alcalophilus ATCC 27647]
Length = 509
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + +FN+ ++RAL GF T IQ+ +P+ L A KD++G A+TG+GKT AFG+P
Sbjct: 1 MPTFHEFNLNHQVVRALEDMGFAEATPIQNATIPTTL-AGKDVIGQAQTGTGKTGAFGVP 59
Query: 61 ILTGI 65
++ I
Sbjct: 60 LIEKI 64
>gi|416056522|ref|ZP_11579867.1| LOW QUALITY PROTEIN: preprotein translocase subunit SecF
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|348002012|gb|EGY42734.1| LOW QUALITY PROTEIN: preprotein translocase subunit SecF
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
Length = 418
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 3 FMDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 61
Query: 64 GI 65
I
Sbjct: 62 KI 63
>gi|118094019|ref|XP_422189.2| PREDICTED: probable ATP-dependent RNA helicase DDX59 [Gallus
gallus]
Length = 625
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 10 PETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKL 69
PET+ L G++ PT IQ ++P LL R DIV +A+TGSGKT AF +P++ ++N+
Sbjct: 217 PETLNSNLKNSGYEVPTPIQMQMIPVGLLGR-DIVASADTGSGKTAAFLLPVIMKVLNET 275
Query: 70 ENPT 73
E P+
Sbjct: 276 ETPS 279
>gi|379708806|ref|YP_005264011.1| putative RNA helicase [Nocardia cyriacigeorgica GUH-2]
gi|374846305|emb|CCF63375.1| putative RNA helicase [Nocardia cyriacigeorgica GUH-2]
Length = 446
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P ++ AL + G TP IQS +P +LA +D++G A TGSGKTLAFG+P+L
Sbjct: 11 FAALGLPVVLVHALGRDGIATPFPIQSATIPD-VLAGRDVLGRAPTGSGKTLAFGLPMLV 69
Query: 64 GIVNKLENP 72
+ P
Sbjct: 70 RLAGAPSAP 78
>gi|298293432|ref|YP_003695371.1| DEAD/DEAH box helicase [Starkeya novella DSM 506]
gi|296929943|gb|ADH90752.1| DEAD/DEAH box helicase domain protein [Starkeya novella DSM 506]
Length = 557
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ + E I++AL + TPT IQ+ +P +LA +D+VG A+TG+GKT AF +PIL +
Sbjct: 11 ELGLAEPILKALAEANHSTPTPIQAQAVPQ-VLAGRDLVGIAQTGTGKTAAFALPILHHL 69
Query: 66 VNKLENPTEEDENDSARKDIVGAAETGSGKTL 97
V K P E SAR ++ SG+ L
Sbjct: 70 VTKRLRP----ERRSARALVLSPTRELSGQIL 97
>gi|392546003|ref|ZP_10293140.1| ATP-dependent RNA helicase, cold shock protein A
[Pseudoalteromonas rubra ATCC 29570]
Length = 611
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M+E V F ++ I++A+ + G+++P++IQ+ +P LL RKD++G A+TG+GKT AF
Sbjct: 1 MSEPVTFESLDLSPAILKAVEELGYQSPSEIQAQCIP-LLLERKDVLGLAQTGTGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L + ++ P
Sbjct: 60 ALPLLNNVDASVKQP 74
>gi|227504305|ref|ZP_03934354.1| possible ATP-dependent RNA helicase [Corynebacterium striatum
ATCC 6940]
gi|227198953|gb|EEI79001.1| possible ATP-dependent RNA helicase [Corynebacterium striatum
ATCC 6940]
Length = 463
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + +P+ I+R L ++G P IQ +P AL A KD++G TGSGKT FG+P
Sbjct: 1 MTTFADLGLPQEIVRVLNKQGITEPFPIQQAAIPDAL-AGKDVLGRGPTGSGKTFTFGLP 59
Query: 61 ILTGIVN 67
ILT + +
Sbjct: 60 ILTRLTH 66
>gi|325577637|ref|ZP_08147912.1| ATP-dependent RNA helicase DeaD [Haemophilus parainfluenzae ATCC
33392]
gi|325160382|gb|EGC72508.1| ATP-dependent RNA helicase DeaD [Haemophilus parainfluenzae ATCC
33392]
Length = 612
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M + + FN +PE I++A+ GF+TP+ IQ +P ALL +D++G A+TGSGKT AF
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIP-ALLEGRDVLGMAQTGSGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++P
Sbjct: 60 SLPLLAKIDPAAKHP 74
>gi|325676737|ref|ZP_08156410.1| ATP-dependent RNA helicase [Rhodococcus equi ATCC 33707]
gi|325552285|gb|EGD21974.1| ATP-dependent RNA helicase [Rhodococcus equi ATCC 33707]
Length = 712
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE ++ AL + P+ IQ+M +P A+ A K+I+G A+TGSGKTLAFG+P+L
Sbjct: 48 FAEIGLPEPVVAALARNSITVPSPIQAMAIPDAI-AGKNILGRAQTGSGKTLAFGLPMLA 106
Query: 64 GIVNKLENP 72
+ + P
Sbjct: 107 RLARHEDRP 115
>gi|146412600|ref|XP_001482271.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
gi|152032567|sp|A5DPU0.1|MAK5_PICGU RecName: Full=ATP-dependent RNA helicase MAK5
gi|146393035|gb|EDK41193.1| hypothetical protein PGUG_05291 [Meyerozyma guilliermondii ATCC
6260]
Length = 754
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 14 IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPT 73
I L GFK PT IQ +P AL KD++G A TGSGKTLA+GIPIL + +LE+ T
Sbjct: 196 INGLAGCGFKEPTAIQRKAIPLALQG-KDVIGKATTGSGKTLAYGIPILERCLAQLESKT 254
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 32/85 (37%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD++G A TGSGKTLA+GIPIL E L +LE ++
Sbjct: 222 KDVIGKATTGSGKTLAYGIPIL------------------------ERCLAQLESKT--- 254
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
T A+I APTRELA Q
Sbjct: 255 -----NTIKPPTAMIFAPTRELAHQ 274
>gi|66550432|ref|XP_395653.2| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform
1 [Apis mellifera]
Length = 452
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W I + + +A +K+PTKIQ +P AL KDI+G AETGSGKT AF +PIL
Sbjct: 20 WKDLGIVDVLCKACEDLKWKSPTKIQYEAIPLALEG-KDIIGLAETGSGKTAAFALPILQ 78
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 79 AL---LENP 84
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 37/85 (43%), Gaps = 39/85 (45%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KDI+G AETGSGKT AF +PIL + LENP
Sbjct: 56 KDIIGLAETGSGKTAAFALPILQAL---LENP---------------------------- 84
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
+ +ALIL PTRELA Q
Sbjct: 85 --------QRYFALILTPTRELAFQ 101
>gi|392400358|ref|YP_006436958.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis Cp162]
gi|390531436|gb|AFM07165.1| DEAD-box helicase [Corynebacterium pseudotuberculosis Cp162]
Length = 660
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|386740147|ref|YP_006213327.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 31]
gi|384476841|gb|AFH90637.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 31]
Length = 660
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|383313989|ref|YP_005374844.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis P54B96]
gi|380869490|gb|AFF21964.1| DEAD-box helicase [Corynebacterium pseudotuberculosis P54B96]
Length = 638
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|387136343|ref|YP_005692323.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 42/02-A]
gi|348606788|gb|AEP70061.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 42/02-A]
Length = 659
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|384506502|ref|YP_005683171.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis C231]
gi|302205951|gb|ADL10293.1| DEAD-box helicase [Corynebacterium pseudotuberculosis C231]
Length = 650
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|300858229|ref|YP_003783212.1| hypothetical protein cpfrc_00811 [Corynebacterium
pseudotuberculosis FRC41]
gi|375288396|ref|YP_005122937.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 3/99-5]
gi|384504410|ref|YP_005681080.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 1002]
gi|384508590|ref|YP_005685258.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis I19]
gi|384510681|ref|YP_005690259.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis PAT10]
gi|300685683|gb|ADK28605.1| hypothetical protein cpfrc_00811 [Corynebacterium
pseudotuberculosis FRC41]
gi|302330505|gb|ADL20699.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 1002]
gi|308276186|gb|ADO26085.1| DEAD-box helicase [Corynebacterium pseudotuberculosis I19]
gi|341824620|gb|AEK92141.1| DEAD-box helicase [Corynebacterium pseudotuberculosis PAT10]
gi|371575685|gb|AEX39288.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 3/99-5]
Length = 660
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|126740399|ref|ZP_01756087.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. SK209-2-6]
gi|126718535|gb|EBA15249.1| ATP-dependent RNA helicase RhlE [Roseobacter sp. SK209-2-6]
Length = 506
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ N+ +++A+Y+ G++TPT IQ+ +P AL R D++G A+TG+GKT +F +P
Sbjct: 35 MTKFTDLNLNPKVLKAIYEAGYETPTPIQAGAIPPALEGR-DVLGIAQTGTGKTASFTLP 93
Query: 61 ILT 63
++T
Sbjct: 94 MIT 96
>gi|412990376|emb|CCO19694.1| probable ATP-dependent RNA helicase DDX41 [Bathycoccus prasinos]
Length = 551
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
++ +P I+ L QKG PT IQ +P +L+ +D++G A TGSGKTLAF +PI
Sbjct: 117 CSFLTMGLPNKILHTLRQKGIMKPTAIQMQGIP-LILSGRDMIGIASTGSGKTLAFVLPI 175
Query: 62 LTGIV 66
LT ++
Sbjct: 176 LTSVM 180
>gi|392568072|gb|EIW61246.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 830
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W F +P + + + + G+ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P
Sbjct: 169 VTKWSHFGLPASCLEVIKKLGYAGPTPIQAQAIP-AIMSGRDVIGVAKTGSGKTIAFLLP 227
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E+ E
Sbjct: 228 MFRHI--KDQRPLEQME 242
>gi|337290483|ref|YP_004629504.1| hypothetical protein CULC22_00872 [Corynebacterium ulcerans
BR-AD22]
gi|384515395|ref|YP_005710487.1| hypothetical protein CULC809_00857 [Corynebacterium ulcerans 809]
gi|397653720|ref|YP_006494403.1| hypothetical protein CULC0102_0969 [Corynebacterium ulcerans 0102]
gi|334696596|gb|AEG81393.1| hypothetical protein CULC809_00857 [Corynebacterium ulcerans 809]
gi|334698789|gb|AEG83585.1| hypothetical protein CULC22_00872 [Corynebacterium ulcerans
BR-AD22]
gi|393402676|dbj|BAM27168.1| hypothetical protein CULC0102_0969 [Corynebacterium ulcerans 0102]
Length = 674
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|295837571|ref|ZP_06824504.1| ATP-dependent RNA helicase [Streptomyces sp. SPB74]
gi|295826577|gb|EDY45280.2| ATP-dependent RNA helicase [Streptomyces sp. SPB74]
Length = 738
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + +PE I+R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 55 FAELGLPEGIVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLL 112
>gi|195437654|ref|XP_002066755.1| GK24389 [Drosophila willistoni]
gi|194162840|gb|EDW77741.1| GK24389 [Drosophila willistoni]
Length = 808
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + P II + + G+K PT IQ +P L R DI+G AETGSGKTLAF IP+L+
Sbjct: 382 WNESGFPPEIIDIIDRVGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTLAFLIPLLS 440
Query: 64 GI 65
I
Sbjct: 441 WI 442
>gi|169854086|ref|XP_001833720.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea
okayama7#130]
gi|116505187|gb|EAU88082.1| ATP-dependent rRNA helicase RRP3 [Coprinopsis cinerea
okayama7#130]
Length = 455
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ ++ AL Q G+K+PT+IQS +P AL R DI+G AETGSGKT AF +PIL
Sbjct: 28 DPLLEALEQVGYKSPTEIQSESLPHALEGR-DIIGVAETGSGKTAAFALPIL 78
>gi|71277821|ref|YP_268464.1| RNA helicase DeaD [Colwellia psychrerythraea 34H]
gi|71143561|gb|AAZ24034.1| RNA helicase DeaD [Colwellia psychrerythraea 34H]
Length = 611
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE ++ A+ GF + T IQ++ +P LLA KD++G A+TG+GKT AFG+P L
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPP-LLAGKDVLGEAQTGTGKTAAFGLPALA 75
Query: 64 GIVNKLENP 72
I ++ P
Sbjct: 76 KIDTSIKKP 84
>gi|389850156|ref|YP_006352391.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 258]
gi|388247462|gb|AFK16453.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 258]
Length = 660
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|302853426|ref|XP_002958228.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
gi|300256416|gb|EFJ40682.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
Length = 574
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 6/81 (7%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + +P +I+A+ + G+K P+ IQ +P L R D++G AETGSGKT AF +P
Sbjct: 154 IRKWEESGLPSLLIKAIDRVGYKKPSPIQMAAIPLGLQQR-DVIGIAETGSGKTAAFVLP 212
Query: 61 ILTGIVNKLENP--TEEDEND 79
+L+ I + P TEE+E D
Sbjct: 213 MLSYI---MRQPPMTEENEAD 230
>gi|213408188|ref|XP_002174865.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
gi|212002912|gb|EEB08572.1| ATP-dependent RNA helicase drs1 [Schizosaccharomyces japonicus
yFS275]
Length = 730
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
I+R L F+ PT IQS +P ALL KDIVGAA TGSGKT AF +PIL +V +
Sbjct: 242 ILRGLSSLNFEDPTPIQSKTIPVALLG-KDIVGAAVTGSGKTAAFVVPILERLVYR 296
>gi|195401282|ref|XP_002059243.1| GJ16136 [Drosophila virilis]
gi|194156117|gb|EDW71301.1| GJ16136 [Drosophila virilis]
Length = 523
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +T+ +A + +K P+KIQ +P AL KD++G AETGSGKT AF +PIL
Sbjct: 66 WKDLGLNDTLCKACEELKWKAPSKIQKEAIPVALQG-KDVIGLAETGSGKTGAFALPILH 124
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 125 AL---LENP 130
>gi|385807275|ref|YP_005843672.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 267]
gi|383804668|gb|AFH51747.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 267]
Length = 662
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|416052882|ref|ZP_11578517.1| ATP-dependent RNA helicase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991674|gb|EGY33137.1| ATP-dependent RNA helicase [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 592
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 5 VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTG 64
+ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 1 MDLGLPEFILNAVSDLGFETPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILAK 59
Query: 65 IVNKLENP 72
I ++P
Sbjct: 60 IDPHEKHP 67
>gi|383775371|ref|YP_005459937.1| putative DEAD/DEAH box helicase [Actinoplanes missouriensis 431]
gi|381368603|dbj|BAL85421.1| putative DEAD/DEAH box helicase [Actinoplanes missouriensis 431]
Length = 571
Score = 59.3 bits (142), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P I+R L ++G TP +IQ+ +P AL R D++G +TGSGKTLAFG+P+L
Sbjct: 13 FADLGLPAEIVRVLNREGISTPFEIQAATVPDALAGR-DVLGRGQTGSGKTLAFGLPVLA 71
Query: 64 GI 65
I
Sbjct: 72 RI 73
>gi|313683287|ref|YP_004061025.1| dead/deah box helicase domain-containing protein [Sulfuricurvum
kujiense DSM 16994]
gi|313156147|gb|ADR34825.1| DEAD/DEAH box helicase domain protein [Sulfuricurvum kujiense DSM
16994]
Length = 526
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 7/84 (8%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A + F + + I++++ GFKTP+ IQ MV+P ++ +D+VG A TG+GKT AFG+P
Sbjct: 13 LATFEAFGLRKEIMQSINFAGFKTPSPIQQMVIP-VIMEGRDVVGQAHTGTGKTAAFGLP 71
Query: 61 ILT------GIVNKLENPTEEDEN 78
L GI + PT E N
Sbjct: 72 ALNKMHLKGGIETLIITPTRELAN 95
>gi|47221754|emb|CAG08808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1046
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ + I+ AL + ++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 345 WVQCGVSMKILSALKKHTYEKPTPIQAQAIP-AVMSGRDLIGIAKTGSGKTIAFLLPMFR 403
Query: 64 GIVNKLENPTEEDE 77
I++ + P EE E
Sbjct: 404 HIMD--QRPLEESE 415
>gi|379715095|ref|YP_005303432.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 316]
gi|387140417|ref|YP_005696395.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis 1/06-A]
gi|355392208|gb|AER68873.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 1/06-A]
gi|377653801|gb|AFB72150.1| DEAD-box helicase [Corynebacterium pseudotuberculosis 316]
Length = 660
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|89890308|ref|ZP_01201818.1| ATP-dependent RNA helicase [Flavobacteria bacterium BBFL7]
gi|89517223|gb|EAS19880.1| ATP-dependent RNA helicase [Flavobacteria bacterium BBFL7]
Length = 425
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
E I+RAL +G++ PT IQ+ +P LL KD++G A+TG+GKT AF IPIL + N
Sbjct: 10 EPILRALQDQGYENPTPIQAQSIP-VLLKGKDLLGVAQTGTGKTAAFSIPILQHLYN 65
>gi|384154754|ref|YP_005537569.1| DEAD/DEAH box helicase [Arcobacter butzleri ED-1]
gi|345468308|dbj|BAK69759.1| DEAD-box ATP dependent DNA helicase [Arcobacter butzleri ED-1]
Length = 516
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
FN E + +A+ + GFK P+ IQ +P L R DIVG A TG+GKT AFG+PIL I
Sbjct: 6 FNFKELLQKAIDEAGFKEPSPIQEQAIPYILDGR-DIVGQAHTGTGKTAAFGLPILNKI 63
>gi|315635445|ref|ZP_07890711.1| ATP-dependent RNA helicase DeaD [Arcobacter butzleri JV22]
gi|315480203|gb|EFU70870.1| ATP-dependent RNA helicase DeaD [Arcobacter butzleri JV22]
Length = 516
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
FN E + +A+ + GFK P+ IQ +P L R DIVG A TG+GKT AFG+PIL I
Sbjct: 6 FNFKELLQKAIDEAGFKEPSPIQEQAIPYILDGR-DIVGQAHTGTGKTAAFGLPILNKI 63
>gi|260949921|ref|XP_002619257.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
gi|238846829|gb|EEQ36293.1| hypothetical protein CLUG_00416 [Clavispora lusitaniae ATCC 42720]
Length = 801
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + + L GFK PT IQ +P AL KD++G A TGSGKTLA+GIP
Sbjct: 212 LPQWQNVPLSAYTLSGLQALGFKQPTPIQKSAIPLALEG-KDVIGKATTGSGKTLAYGIP 270
Query: 61 ILTGIVNKL 69
IL ++K+
Sbjct: 271 ILEKYISKI 279
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 27/85 (31%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD++G A TGSGKTLA+GIPIL ++K+ ++ L +
Sbjct: 251 KDVIGKATTGSGKTLAYGIPILEKYISKIAE------------------IKTLRQ----- 287
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
KKT +I APTRELA Q
Sbjct: 288 ----KKTIPAPTGIIFAPTRELAHQ 308
>gi|336367070|gb|EGN95415.1| hypothetical protein SERLA73DRAFT_162301 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379794|gb|EGO20948.1| hypothetical protein SERLADRAFT_417400 [Serpula lacrymans var.
lacrymans S7.9]
Length = 756
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IPE I+ + + G+K P+ IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 328 LRSWTESAIPEIILDVIAKIGYKEPSAIQRQAIPIGLQNR-DIIGIAETGSGKTAAFVIP 386
Query: 61 ILTGI 65
+L+ I
Sbjct: 387 MLSFI 391
>gi|323137351|ref|ZP_08072429.1| DEAD/DEAH box helicase domain protein [Methylocystis sp. ATCC
49242]
gi|322397338|gb|EFX99861.1| DEAD/DEAH box helicase domain protein [Methylocystis sp. ATCC
49242]
Length = 450
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + E ++RAL ++G++TPT IQ+ +P L+ +D++G A+TG+GKT AF +P
Sbjct: 1 MTKFSDLGLAEILLRALDREGYETPTSIQAQAIPY-LMEGRDLLGIAQTGTGKTAAFALP 59
Query: 61 ILTGIVNKLENP 72
IL + P
Sbjct: 60 ILNRLAADRRRP 71
>gi|440299556|gb|ELP92108.1| ATP-dependent rRNA helicase rrp3, putative [Entamoeba invadens
IP1]
Length = 433
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
+PE +I+ + G+K PT IQS +P AL RKDI+G A+TGSGKT AF +P+L ++N
Sbjct: 21 LPE-VIKVVEHLGYKMPTPIQSSSIPVAL-KRKDIIGIAQTGSGKTAAFLLPMLNHLLN 77
>gi|407982755|ref|ZP_11163421.1| helicase conserved C-terminal domain protein [Mycobacterium
hassiacum DSM 44199]
gi|407375643|gb|EKF24593.1| helicase conserved C-terminal domain protein [Mycobacterium
hassiacum DSM 44199]
Length = 517
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + + + I+RAL + G P IQ + MP AL A D++G A TG GKTLAFG+P+L
Sbjct: 8 FAELGVRDEIVRALAEDGKVHPFAIQELTMPLAL-AGDDLIGQARTGMGKTLAFGVPLLQ 66
Query: 64 GIVNKLENP 72
I + E P
Sbjct: 67 RIADDTERP 75
>gi|409049919|gb|EKM59396.1| hypothetical protein PHACADRAFT_249858 [Phanerochaete carnosa
HHB-10118-sp]
Length = 851
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W F +P + + + + G+ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P
Sbjct: 192 VTKWSHFGLPASCLDVIKKLGYAGPTPIQAQAIP-AIMSGRDVIGVAKTGSGKTIAFLLP 250
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E+ E
Sbjct: 251 MFRHI--KDQRPLEQME 265
>gi|401624490|gb|EJS42546.1| dbp9p [Saccharomyces arboricola H-6]
Length = 594
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F++ +++A+ GF+ PT IQS +P AL ++DI+ A TGSGKTLA+ IP++ I+
Sbjct: 22 FHLDSRLLQAIKNIGFQNPTLIQSHSIPLALQEKRDIIAKAATGSGKTLAYLIPVIQTIL 81
Query: 67 NKLENPTEEDEN 78
+ ++EN
Sbjct: 82 EYKKTIANDEEN 93
>gi|419801865|ref|ZP_14327068.1| cold-shock DEAD-box protein A [Haemophilus parainfluenzae HK262]
gi|385192232|gb|EIF39638.1| cold-shock DEAD-box protein A [Haemophilus parainfluenzae HK262]
Length = 612
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 1 MAEWVKFN---IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M + + FN +PE I++A+ GF+TP+ IQ +P ALL +D++G A+TGSGKT AF
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQACIP-ALLEGRDVLGMAQTGSGKTAAF 59
Query: 58 GIPILTGIVNKLENP 72
+P+L I ++P
Sbjct: 60 SLPLLAKIDPAAKHP 74
>gi|367029791|ref|XP_003664179.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
gi|347011449|gb|AEO58934.1| hypothetical protein MYCTH_2306707 [Myceliophthora thermophila ATCC
42464]
Length = 785
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EWV + ++ A+ + F PT IQ+ +P ++ D++G A TGSGKTLAFGIP
Sbjct: 200 MSEWVPLGLSPQVLSAIARLKFAKPTAIQAKAIPH-IMNGHDLIGKAATGSGKTLAFGIP 258
Query: 61 IL 62
I+
Sbjct: 259 IV 260
>gi|317025749|ref|XP_001389716.2| ATP-dependent RNA helicase drs1 [Aspergillus niger CBS 513.88]
Length = 827
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 314 FNLSRPILRGLAGVNFSNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 368
>gi|119193909|ref|XP_001247558.1| hypothetical protein CIMG_01329 [Coccidioides immitis RS]
gi|118574275|sp|Q1E7Y4.1|MAK5_COCIM RecName: Full=ATP-dependent RNA helicase MAK5
gi|392863201|gb|EAS36075.2| ATP-dependent RNA helicase MAK5 [Coccidioides immitis RS]
Length = 783
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W ++ + +L + F +PT IQS +P A+L D++G A TGSGKTLAFGIP
Sbjct: 189 VSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIP-AVLQGHDVIGKASTGSGKTLAFGIP 247
Query: 61 ILTGIVNKLEN---PTEEDENDSAR 82
I+ + K PT +E +S +
Sbjct: 248 IVEYFLGKYRGGRAPTASEERESTK 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 30/87 (34%)
Query: 84 DIVGAAETGSGKTLAFGIPILTGIVNKLEN---PTEEDENDSGLEEEAEEVLEELEEESA 140
D++G A TGSGKTLAFGIPI+ + K PT +E +S E
Sbjct: 229 DVIGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEERESTKEP-------------- 274
Query: 141 NTTEFVKKTRNKLYALILAPTRELAIQ 167
ALIL+PTRELA Q
Sbjct: 275 -------------MALILSPTRELAHQ 288
>gi|403068845|ref|ZP_10910177.1| ATP-dependent RNA helicase YxiN [Oceanobacillus sp. Ndiop]
Length = 481
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + ++N+ E II+AL G++TPT++QS V+ A L +KD+V ++TGSGKT ++GIP
Sbjct: 3 MQSFNEYNLSEEIIKALTNLGYETPTEVQSKVLSLA-LDKKDLVVKSQTGSGKTASYGIP 61
Query: 61 IL 62
+
Sbjct: 62 VC 63
>gi|399025475|ref|ZP_10727471.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
gi|398077852|gb|EJL68799.1| DNA/RNA helicase, superfamily II [Chryseobacterium sp. CF314]
Length = 329
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + N+ IIRA+ + G+ PT+IQ +P +LA KDI+G A+TG+GKT AF +P
Sbjct: 33 MMSFKDLNLINPIIRAVTEAGYSKPTEIQYTAIPH-ILAGKDIIGCAQTGTGKTAAFAMP 91
Query: 61 IL 62
IL
Sbjct: 92 IL 93
>gi|142982528|sp|A2QAX7.1|DRS1_ASPNC RecName: Full=ATP-dependent RNA helicase drs1
gi|134055839|emb|CAK37361.1| unnamed protein product [Aspergillus niger]
Length = 824
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 314 FNLSRPILRGLAGVNFSNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 368
>gi|115492615|ref|XP_001210935.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
gi|121742543|sp|Q0CZN5.1|DRS1_ASPTN RecName: Full=ATP-dependent RNA helicase drs1
gi|114197795|gb|EAU39495.1| hypothetical protein ATEG_00849 [Aspergillus terreus NIH2624]
Length = 821
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 309 FNLSRPILRGLAAVNFTNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 363
>gi|299117107|emb|CBN73878.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 467
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 8 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
++PE ++R + ++GF PT IQS P ALL R D+VG + TGSGKTLAF +P + I
Sbjct: 67 SMPEYVLREVLKQGFPKPTPIQSQGWPMALLGR-DMVGISATGSGKTLAFLLPAMIHI 123
>gi|240949643|ref|ZP_04753978.1| cold-shock DEAD box protein A-like protein [Actinobacillus minor
NM305]
gi|240295901|gb|EER46577.1| cold-shock DEAD box protein A-like protein [Actinobacillus minor
NM305]
Length = 604
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P++I+ A+ + GF TP+ IQ +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FADLGLPQSILDAVNEMGFVTPSPIQQACIPH-LLNGRDVLGMAQTGSGKTAAFSLPILA 66
Query: 64 GIVNKLENP 72
I + +P
Sbjct: 67 QIDPEQRHP 75
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 389 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 447
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 448 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 491
>gi|350638693|gb|EHA27049.1| hypothetical protein ASPNIDRAFT_130294 [Aspergillus niger ATCC
1015]
Length = 793
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 287 FNLSRPILRGLAGVNFSNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 341
>gi|387138413|ref|YP_005694392.1| DEAD/DEAH box helicase [Corynebacterium pseudotuberculosis CIP
52.97]
gi|349734891|gb|AEQ06369.1| DEAD-box helicase [Corynebacterium pseudotuberculosis CIP 52.97]
Length = 829
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I++A+ + GF+TP+ IQ+ +P L+ D++G A+TG+GKT AF +PIL+ I
Sbjct: 71 LGLPDAILKAVAKVGFETPSPIQAQTIP-VLMEGHDVMGLAQTGTGKTAAFALPILSRIN 129
Query: 67 NKLENP 72
K +P
Sbjct: 130 VKKRHP 135
>gi|260063256|ref|YP_003196336.1| DEAD/DEAH box helicase-like protein [Robiginitalea biformata
HTCC2501]
gi|88783350|gb|EAR14522.1| DEAD/DEAH box helicase-like protein [Robiginitalea biformata
HTCC2501]
Length = 422
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ + E I+RAL ++ + PT IQ+ +P +L R+D++G+A+TG+GKT AF IPIL +
Sbjct: 5 QLELAEPILRALKKENYSRPTDIQAQAIPH-VLNRRDVMGSAQTGTGKTAAFAIPILQHL 63
Query: 66 VNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGI 101
E D ++ +V A + LA I
Sbjct: 64 --------ERDRRYGGKRGVVNALIVTPTRELAIQI 91
>gi|83766036|dbj|BAE56179.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 343 FNLSRPILRGLAAVNFTNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 397
>gi|319787505|ref|YP_004146980.1| DEAD/DEAH box helicase [Pseudoxanthomonas suwonensis 11-1]
gi|317466017|gb|ADV27749.1| DEAD/DEAH box helicase domain protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 616
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ +PE ++ AL G++TP+ IQ+ +P ALL+ +D++G A+TG+GKT AF +PIL+ +
Sbjct: 16 ELGLPEPLLAALTAVGYETPSPIQAATIP-ALLSGRDVLGTAQTGTGKTAAFALPILSHL 74
Query: 66 VNKLENP 72
KL P
Sbjct: 75 DLKLARP 81
>gi|303317730|ref|XP_003068867.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240108548|gb|EER26722.1| ATP-dependent RNA helicase DRS1, putative [Coccidioides posadasii
C735 delta SOWgp]
Length = 840
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L GF PT IQ +P LL KD+VG A TGSGKT AF IPIL
Sbjct: 324 FNLSRPILRGLAAVGFSAPTPIQRKAIPIGLLG-KDLVGGAVTGSGKTAAFIIPIL 378
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|355571182|ref|ZP_09042434.1| DEAD/DEAH box helicase domain protein [Methanolinea tarda NOBI-1]
gi|354825570|gb|EHF09792.1| DEAD/DEAH box helicase domain protein [Methanolinea tarda NOBI-1]
Length = 441
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ ++PE ++RA+ GF+ PT IQS+ +P + D+VG A TG+GKT AFGIP+L
Sbjct: 6 FADLDVPEPLLRAIRDLGFEEPTPIQSLAIP-VIREGHDMVGQAHTGTGKTAAFGIPLL 63
>gi|385840656|ref|YP_005863980.1| ATP-dependent RNA helicase [Lactobacillus salivarius CECT 5713]
gi|300214777|gb|ADJ79193.1| ATP-dependent RNA helicase [Lactobacillus salivarius CECT 5713]
Length = 440
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 56/101 (55%), Gaps = 15/101 (14%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + FN E I +AL + FK PT++Q+ ++P+ +L K +VG ++TGSGKT F +P
Sbjct: 1 MANFRGFNFKEYIYQALDEINFKEPTEVQARLIPT-ILKGKSVVGQSQTGSGKTHTFLLP 59
Query: 61 ILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGI 101
I +N +A+KD V A T + LA+ I
Sbjct: 60 IF--------------QNLNAQKDEVQAVITTPSRELAYQI 86
>gi|240274680|gb|EER38196.1| ATP-dependent RNA helicase drs1 [Ajellomyces capsulatus H143]
Length = 828
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
F++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF IPIL
Sbjct: 309 FSLSRPILRGLTFVGFTTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIIPIL 363
>gi|452912129|ref|ZP_21960782.1| putative ATP-dependent RNA helicase [Kocuria palustris PEL]
gi|452832711|gb|EME35539.1| putative ATP-dependent RNA helicase [Kocuria palustris PEL]
Length = 655
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F + E I AL + G P IQSM +P AL +DI+G A+TG+GKTL FGIP +
Sbjct: 70 FADFGVREDIAEALAEAGIVHPFPIQSMTLPIALSG-QDIIGQAKTGTGKTLGFGIPAVQ 128
Query: 64 GIVNKLEN 71
+V + ++
Sbjct: 129 NVVGRDDD 136
>gi|405124025|gb|AFR98787.1| ATP-dependent RNA helicase MAK5 [Cryptococcus neoformans var.
grubii H99]
Length = 771
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW + + R+ F PT IQS +P+ + R D+VG AETGSGKTLA+ +P
Sbjct: 170 LPEWSSIPLHPALKRSFLASSFTAPTAIQSRAIPAGVTGR-DVVGVAETGSGKTLAYSLP 228
Query: 61 IL 62
IL
Sbjct: 229 IL 230
>gi|367013592|ref|XP_003681296.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
gi|359748956|emb|CCE92085.1| hypothetical protein TDEL_0D05010 [Torulaspora delbrueckii]
Length = 750
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 3 EWVKF-NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
EW K + T ++ L + GF PT IQ+ +P A+ +DI+G A TGSGKTLA+GIPI
Sbjct: 174 EWNKLGKLSVTTLQGLTKLGFSKPTDIQAKAIPEAMKG-EDIMGKAATGSGKTLAYGIPI 232
Query: 62 LTGIVN 67
L ++N
Sbjct: 233 LEKMLN 238
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 370 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 428
Query: 64 GIVNK 68
I+ +
Sbjct: 429 HIMGQ 433
>gi|353237187|emb|CCA69166.1| related to DRS1-RNA helicase of the DEAD box family [Piriformospora
indica DSM 11827]
Length = 767
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ N+ I+++L F TPT IQ+ +P ALL KDIVG A TGSGKT AF IPIL
Sbjct: 178 FLTMNLSRPIMKSLTSLSFHTPTPIQAATIPVALLG-KDIVGNAVTGSGKTAAFMIPILE 236
Query: 64 GIVNK 68
++ +
Sbjct: 237 RLLYR 241
>gi|167538304|ref|XP_001750817.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770734|gb|EDQ84416.1| predicted protein [Monosiga brevicollis MX1]
Length = 1041
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 42/68 (61%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+A W + + A+ ++GF PT IQ + A+ +D++ AA TGSGKTLAFG+P
Sbjct: 290 LAAWTVLQLDRELAEAVVRRGFTAPTPIQQAAIVPAVRDYRDVIAAAPTGSGKTLAFGLP 349
Query: 61 ILTGIVNK 68
+L I+N+
Sbjct: 350 VLQHILNR 357
Score = 41.6 bits (96), Expect = 0.100, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 33/85 (38%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
+D++ AA TGSGKTLAFG+P+L I+N+ + +GL+
Sbjct: 330 RDVIAAAPTGSGKTLAFGLPVLQHILNR----RARGRSTAGLQ----------------- 368
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
LIL PTRELA+Q
Sbjct: 369 ------------CLILTPTRELALQ 381
>gi|428773406|ref|YP_007165194.1| DEAD/DEAH box helicase [Cyanobacterium stanieri PCC 7202]
gi|428687685|gb|AFZ47545.1| DEAD/DEAH box helicase domain protein [Cyanobacterium stanieri
PCC 7202]
Length = 483
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 10/93 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + ET++ L GF TPTKIQ++ +P L+A +D+VG ++TG+GKT A+ +PIL
Sbjct: 5 FASLGLSETLVNQLDNIGFNTPTKIQTLAIPE-LIAGRDVVGQSQTGTGKTAAYSLPILD 63
Query: 64 GIVNKLEN-------PTEE--DENDSARKDIVG 87
I +N PT E + A KD++G
Sbjct: 64 KIDKSDKNVQALILAPTRELAQQVAEAFKDLIG 96
>gi|350398997|ref|XP_003485378.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like [Bombus
impatiens]
Length = 453
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W I +T+ + +K+PTKIQ +P L KD++G AETGSGKT AF IPIL
Sbjct: 20 WKDLGIVDTLCKTCEDLKWKSPTKIQCEAIPLTLEG-KDVIGLAETGSGKTAAFAIPILQ 78
Query: 64 GIVNKLENP 72
+ LENP
Sbjct: 79 AL---LENP 84
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 37/85 (43%), Gaps = 39/85 (45%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD++G AETGSGKT AF IPIL + LENP
Sbjct: 56 KDVIGLAETGSGKTAAFAIPILQAL---LENP---------------------------- 84
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
+ +ALIL PTRELA Q
Sbjct: 85 --------QRYFALILTPTRELAFQ 101
>gi|367040293|ref|XP_003650527.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
gi|346997788|gb|AEO64191.1| hypothetical protein THITE_2110069 [Thielavia terrestris NRRL 8126]
Length = 775
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ WV + + ++ A+ + F PT IQ+ +P + D++G A TGSGKTLAFGIP
Sbjct: 193 MSHWVPLGLSQQMLSAIARLKFAKPTAIQASAIPEVMNGH-DVIGKAVTGSGKTLAFGIP 251
Query: 61 ILTGIVNKLEN 71
I+ + K N
Sbjct: 252 IVESWLAKATN 262
>gi|408676181|ref|YP_006876008.1| ATP-dependent RNA helicase [Streptomyces venezuelae ATCC 10712]
gi|328880510|emb|CCA53749.1| ATP-dependent RNA helicase [Streptomyces venezuelae ATCC 10712]
Length = 472
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + + ++P ++ L + G TP IQS +P AL R D++G TGSGKTLAFG+P+
Sbjct: 28 ASFAELDLPAEVLDVLARLGLDTPFPIQSATLPDALAGR-DVLGRGRTGSGKTLAFGLPL 86
Query: 62 L 62
L
Sbjct: 87 L 87
>gi|320038882|gb|EFW20817.1| ATP-dependent RNA helicase DRS1 [Coccidioides posadasii str.
Silveira]
Length = 840
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L GF PT IQ +P LL KD+VG A TGSGKT AF IPIL
Sbjct: 324 FNLSRPILRGLAAVGFSAPTPIQRKAIPIGLLG-KDLVGGAVTGSGKTAAFIIPIL 378
>gi|432114505|gb|ELK36353.1| Putative ATP-dependent RNA helicase DDX23 [Myotis davidii]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPILTGIVNKLENPTE 116
I K++ E D+ A I+ A A+ +T+ FG P+ V + + +
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPLGIRTVAVIGSISR 508
Query: 117 EDE 119
ED+
Sbjct: 509 EDQ 511
>gi|159489242|ref|XP_001702606.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280628|gb|EDP06385.1| predicted protein [Chlamydomonas reinhardtii]
Length = 602
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + NI +++A+ G+K+PT IQ+ +P AL R DI G+A TGSGKT AF +P
Sbjct: 149 ASFADLNISRPLLKAVEALGYKSPTPIQAACIPLALAGR-DICGSAVTGSGKTAAFALPF 207
Query: 62 LTGIVNK 68
L ++++
Sbjct: 208 LERLLHR 214
>gi|451848387|gb|EMD61693.1| hypothetical protein COCSADRAFT_163118 [Cochliobolus sativus
ND90Pr]
Length = 1132
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + + + + + G++ PT IQ+ P +L R D++G A+TGSGKTLAFGIP
Sbjct: 489 VTKWAQMGLLQATMDVFTRVGYQKPTSIQAQAAPISLSGR-DLIGVAKTGSGKTLAFGIP 547
Query: 61 ILTGIVNK 68
++ I+++
Sbjct: 548 MIRHILDQ 555
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|426201913|gb|EKV51836.1| hypothetical protein AGABI2DRAFT_182780 [Agaricus bisporus var.
bisporus H97]
Length = 524
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ +IPE + A GFK P+ IQ+ P AL R D+VG AETGSGKTLAFGIP L+ +
Sbjct: 112 QLSIPEGLRTAF--TGFKEPSPIQACTWPPALDGR-DVVGIAETGSGKTLAFGIPALSRL 168
Query: 66 VN 67
+
Sbjct: 169 IQ 170
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 23/27 (85%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVN 109
+D+VG AETGSGKTLAFGIP L+ ++
Sbjct: 144 RDVVGIAETGSGKTLAFGIPALSRLIQ 170
>gi|326473339|gb|EGD97348.1| ATP-dependent RNA helicase DRS1 [Trichophyton tonsurans CBS 112818]
Length = 700
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + ++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF +PI
Sbjct: 296 ASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIVPI 354
Query: 62 L 62
L
Sbjct: 355 L 355
>gi|148672231|gb|EDL04178.1| mCG18410, isoform CRA_c [Mus musculus]
Length = 466
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 225 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 283
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 284 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 327
>gi|310790707|gb|EFQ26240.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 733
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + +P ++ + + G+K P+ IQ +P AL AR D++G A TGSGKT AF +P
Sbjct: 289 MRSWEESGLPRQLLNIVDRVGYKDPSPIQRAAIPIALQAR-DLIGVAVTGSGKTAAFLLP 347
Query: 61 ILTGIVNKLENPTEEDENDSA 81
+LT + L TE ++ND A
Sbjct: 348 LLT-YIQDLPPLTEINKNDGA 367
>gi|67517117|ref|XP_658442.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
gi|40746512|gb|EAA65668.1| hypothetical protein AN0838.2 [Aspergillus nidulans FGSC A4]
Length = 1676
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 795 FNLSRPILRGLAAVNFTNPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 849
>gi|374315479|ref|YP_005061907.1| DNA/RNA helicase [Sphaerochaeta pleomorpha str. Grapes]
gi|359351123|gb|AEV28897.1| DNA/RNA helicase, superfamily II [Sphaerochaeta pleomorpha str.
Grapes]
Length = 637
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ + + + I AL KGF+ PTKIQ+ +P L + D++G A+TG+GKT AFG+P
Sbjct: 4 LTHFAELGLSAQTIAALEAKGFEEPTKIQAACIPLLLKDQVDVIGQAQTGTGKTAAFGLP 63
Query: 61 IL 62
IL
Sbjct: 64 IL 65
>gi|290959211|ref|YP_003490393.1| ATP-dependent RNA helicase [Streptomyces scabiei 87.22]
gi|260648737|emb|CBG71850.1| putative ATP-dependent RNA helicase [Streptomyces scabiei 87.22]
Length = 765
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +PE ++R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 37 FATLGLPEGVVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLL 94
>gi|254561714|ref|YP_003068809.1| RNA helicase [Methylobacterium extorquens DM4]
gi|254268992|emb|CAX24953.1| RNA helicase [Methylobacterium extorquens DM4]
Length = 510
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ F + + ++RAL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFTDFGLAQPVLRALEEAGYVTPTPIQAQAVPPAMEGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|218530745|ref|YP_002421561.1| DEAD/DEAH box helicase [Methylobacterium extorquens CM4]
gi|218523048|gb|ACK83633.1| DEAD/DEAH box helicase domain protein [Methylobacterium
extorquens CM4]
Length = 510
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ F + + ++RAL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFTDFGLAQPVLRALEEAGYVTPTPIQAQAVPPAMEGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|163851993|ref|YP_001640036.1| DEAD/DEAH box helicase [Methylobacterium extorquens PA1]
gi|240139120|ref|YP_002963595.1| RNA helicase [Methylobacterium extorquens AM1]
gi|163663598|gb|ABY30965.1| DEAD/DEAH box helicase domain protein [Methylobacterium
extorquens PA1]
gi|240009092|gb|ACS40318.1| RNA helicase [Methylobacterium extorquens AM1]
Length = 510
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ F + + ++RAL + G+ TPT IQ+ +P A+ R D+ G A+TG+GKT AF +P
Sbjct: 1 MTQFTDFGLAQPVLRALEEAGYVTPTPIQAQAVPPAMEGR-DLCGIAQTGTGKTAAFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|299747858|ref|XP_001837294.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
gi|298407711|gb|EAU84911.2| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Coprinopsis
cinerea okayama7#130]
Length = 1081
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W F +P + I + + + PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 422 KWSHFGLPASCIEVIKRLNYTAPTSIQAQAIP-AIMSGRDVIGVAKTGSGKTIAFLLPLF 480
Query: 63 TGIVNKLENPTEEDE 77
I K + P E+ E
Sbjct: 481 RHI--KDQRPLEQME 493
>gi|254284072|ref|ZP_04959040.1| cold-shock deAd-box protein a [gamma proteobacterium NOR51-B]
gi|219680275|gb|EED36624.1| cold-shock deAd-box protein a [gamma proteobacterium NOR51-B]
Length = 598
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ + + +P+ +++AL G+++P+ IQSM +P LL D+VG A+TG+GKT AF +P
Sbjct: 7 LGRFDELRLPDFLLKALADVGYESPSAIQSMTIPP-LLDGHDLVGQAQTGTGKTAAFALP 65
Query: 61 ILTGIVNKLENP 72
+L + K P
Sbjct: 66 VLARLDTKAGGP 77
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|443729238|gb|ELU15222.1| hypothetical protein CAPTEDRAFT_167508 [Capitella teleta]
Length = 1000
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + + ++ L + F PT IQS +P A+++ +DI+G A TGSGKTLAF +P+
Sbjct: 340 WAQCGVSKKVMDCLKRNNFDKPTPIQSQAVP-AIMSGRDIIGIARTGSGKTLAFLLPLFR 398
Query: 64 GIVNKLENPTEED 76
+ L+ P ED
Sbjct: 399 HV---LDQPEMED 408
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|358370127|dbj|GAA86739.1| ATP-dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 832
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 319 FNLSRPILRGLAGVNFSNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 373
>gi|357236526|ref|ZP_09123869.1| hypothetical protein STRCR_2065 [Streptococcus criceti HS-6]
gi|356884508|gb|EHI74708.1| hypothetical protein STRCR_2065 [Streptococcus criceti HS-6]
Length = 519
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + N+ E I++A+ + GF P+ IQ M +P AL KD++G A+TG+GKT AFG+P L
Sbjct: 2 KFTELNLAENILQAVEKAGFVEPSPIQEMTIPLALEG-KDVIGQAQTGTGKTAAFGLPTL 60
Query: 63 TGI 65
I
Sbjct: 61 NKI 63
>gi|390603942|gb|EIN13333.1| DEAD-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 546
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
IP+ + AL GFK PT IQ+ P AL R D+VG AETGSGKTLAFG+P L+ +V
Sbjct: 118 IPDDLRTAL--DGFKEPTPIQAYAWPPALEGR-DVVGIAETGSGKTLAFGLPALSRLV 172
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|33240544|ref|NP_875486.1| superfamily II DNA/RNA helicase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
gi|33238072|gb|AAQ00139.1| Superfamily II DNA/RNA helicase [Prochlorococcus marinus subsp.
marinus str. CCMP1375]
Length = 603
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F E +++ L KG++ PT IQ +P +L R D++G A+TG+GKT AF +P+L I
Sbjct: 56 FGFSEALLKTLKNKGYEEPTPIQKASIPELMLGR-DLLGQAQTGTGKTAAFALPLLERIN 114
Query: 67 NKLENP 72
+K NP
Sbjct: 115 SKERNP 120
>gi|345567391|gb|EGX50323.1| hypothetical protein AOL_s00076g87 [Arthrobotrys oligospora ATCC
24927]
Length = 791
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + ++P+ ++ ++ G+K P+ IQ +P AL +R D++G A TGSGKT +F +P
Sbjct: 342 MRSWKESSLPQVLLDVIHSVGYKDPSPIQRAAIPIALRSR-DVIGVAVTGSGKTASFILP 400
Query: 61 ILTGIVN--KLENPTEED 76
+L I + L+N T+ D
Sbjct: 401 LLVYIKDLPPLDNITKHD 418
>gi|336476811|ref|YP_004615952.1| DEAD/DEAH box helicase [Methanosalsum zhilinae DSM 4017]
gi|335930192|gb|AEH60733.1| DEAD/DEAH box helicase domain protein [Methanosalsum zhilinae DSM
4017]
Length = 451
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
FNI I+RAL +G PT IQ +P + + KD++G + TGSGKT AF IP+L IV
Sbjct: 6 FNIKSQIVRALNNEGITAPTDIQEQTIP-LIASGKDVIGISHTGSGKTAAFAIPLLDKIV 64
>gi|218780159|ref|YP_002431477.1| DEAD/DEAH box helicase [Desulfatibacillum alkenivorans AK-01]
gi|218761543|gb|ACL04009.1| DEAD/DEAH box helicase domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 489
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 2/69 (2%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ F++PET++ L GF+ T IQ+ V+P AL + KDI G A+TG+GKT AF +P+
Sbjct: 24 KFADFDLPETLLEGLKDAGFERCTPIQAQVLPVAL-SGKDIAGQAQTGTGKTAAFLVPMF 82
Query: 63 TGIVNKLEN 71
+ ++ LEN
Sbjct: 83 SKLLG-LEN 90
>gi|358369372|dbj|GAA85987.1| ATP dependent RNA helicase [Aspergillus kawachii IFO 4308]
Length = 766
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + I+ L + F TPT +Q +P +L D++G A TGSGKTLAFGIPIL
Sbjct: 194 WESLGLSPEILTGLSKMKFTTPTLVQKSCIPQ-ILDGHDVIGKASTGSGKTLAFGIPILE 252
Query: 64 GIVNK----LENPTEEDENDSA 81
+ K L EE + DSA
Sbjct: 253 HYLEKKREDLRAGKEEKKKDSA 274
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 25/84 (29%)
Query: 84 DIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTT 143
D++G A TGSGKTLAFGIPIL + LE++ E++ EE
Sbjct: 231 DVIGKASTGSGKTLAFGIPIL----------------EHYLEKKREDLRAGKEE------ 268
Query: 144 EFVKKTRNKLYALILAPTRELAIQ 167
KK + ALI++PTRELA Q
Sbjct: 269 ---KKKDSAPIALIMSPTRELAHQ 289
>gi|357412196|ref|YP_004923932.1| DEAD/DEAH box helicase [Streptomyces flavogriseus ATCC 33331]
gi|320009565|gb|ADW04415.1| DEAD/DEAH box helicase domain protein [Streptomyces flavogriseus
ATCC 33331]
Length = 726
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE ++R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P L
Sbjct: 49 FADLGLPEGVVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPTLA 107
Query: 64 GI 65
+
Sbjct: 108 AL 109
>gi|157736313|ref|YP_001488996.1| DEAD/DEAH box helicase [Arcobacter butzleri RM4018]
gi|157698167|gb|ABV66327.1| ATP-dependent RNA helicase, DEAD box family [Arcobacter butzleri
RM4018]
Length = 516
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
FN E + +A+ + GFK P+ IQ +P L R DIVG A TG+GKT AFG+PIL I
Sbjct: 6 FNFKELLQKAIDEAGFKEPSPIQEQAIPYILDGR-DIVGQAHTGTGKTAAFGLPILNKI 63
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|416081084|ref|ZP_11586358.1| ATP-dependent RNA helicase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|348011107|gb|EGY51092.1| ATP-dependent RNA helicase [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
Length = 78
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ +PE I+ A+ GF+TP+ IQ + +P LL +D++G A+TGSGKT AF +PIL
Sbjct: 8 FMDLGLPEFILNAVSDLGFQTPSPIQQICIPH-LLEGRDVLGMAQTGSGKTAAFALPILA 66
Query: 64 GI 65
I
Sbjct: 67 KI 68
>gi|50287517|ref|XP_446188.1| hypothetical protein [Candida glabrata CBS 138]
gi|74691026|sp|Q6FUA6.1|DBP9_CANGA RecName: Full=ATP-dependent RNA helicase DBP9
gi|49525495|emb|CAG59112.1| unnamed protein product [Candida glabrata]
Length = 595
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F + +++A+ GF PT IQS +P AL ++DI+ A TGSGKTLA+ IP++ I+
Sbjct: 19 FKLDARLLQAIKGSGFTHPTLIQSHAIPLALEEKRDIIAKAATGSGKTLAYLIPVIQTIL 78
Query: 67 NKLENPTEEDE 77
+ ++ T DE
Sbjct: 79 DYKKSRTNGDE 89
>gi|412992467|emb|CCO18447.1| predicted protein [Bathycoccus prasinos]
Length = 818
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+P+ I+RA+ + G+ P+ IQ +P LL R D++G AETGSGKT AF +P+L I+
Sbjct: 389 LPQEILRAIEKVGYTKPSPIQMASIPIGLLKR-DVIGVAETGSGKTCAFVVPMLAHIM 445
>gi|387902864|ref|YP_006333203.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
gi|387577756|gb|AFJ86472.1| ATP-dependent RNA helicase [Burkholderia sp. KJ006]
Length = 493
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + +F + I++A+ ++G+ TPT IQ+ +P +LA +D++GAA+TG+GKT +F +PI
Sbjct: 11 ATFDQFGLAPDILKAIVEQGYTTPTPIQAQAIP-VVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 62 LTGIV 66
+ ++
Sbjct: 70 IQRLL 74
>gi|330926678|ref|XP_003301562.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
gi|311323563|gb|EFQ90355.1| hypothetical protein PTT_13094 [Pyrenophora teres f. teres 0-1]
Length = 827
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + + E ++ AL + F PT IQ +P +LA +D++G A TGSGKTLAFGIP
Sbjct: 257 VSAWDELELSEEMLGALAKLKFSKPTTIQKSTIPE-ILAGRDVIGKASTGSGKTLAFGIP 315
Query: 61 ILTGIVNKLENPTEEDEN 78
I+ + + +++ E+
Sbjct: 316 IIESYLASRSSASKDPED 333
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 391 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 449
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 450 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 493
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|327272752|ref|XP_003221148.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform
2 [Anolis carolinensis]
Length = 399
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
+ E + A Q G+KTPTKIQ +P AL R DI+G AETGSGKT AF +PIL +
Sbjct: 23 VTEVLCEACDQLGWKTPTKIQVESIPLALQGR-DIIGLAETGSGKTGAFALPILQAL--- 78
Query: 69 LENP 72
LE P
Sbjct: 79 LETP 82
>gi|309776780|ref|ZP_07671754.1| ATP-dependent RNA helicase RhlE [Erysipelotrichaceae bacterium
3_1_53]
gi|308915528|gb|EFP61294.1| ATP-dependent RNA helicase RhlE [Erysipelotrichaceae bacterium
3_1_53]
Length = 438
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ NI E I++A+ ++G+ TPT IQ +P AL R DI+G A+TG+GKT AF IP +
Sbjct: 2 KFQTLNITEPILKAINEQGYLTPTPIQEQAIPYALQGR-DILGCAQTGTGKTAAFSIPTI 60
Query: 63 TGIVNKLE 70
++N+ E
Sbjct: 61 Q-LLNRHE 67
>gi|440696205|ref|ZP_20878693.1| DEAD/DEAH box helicase [Streptomyces turgidiscabies Car8]
gi|440281589|gb|ELP69170.1| DEAD/DEAH box helicase [Streptomyces turgidiscabies Car8]
Length = 752
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +PE ++R L Q G +P IQ+ +P AL A KDI+G TGSGKTL+FG+P+LT
Sbjct: 48 FTDLGLPEGVVRKLTQNGVTSPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLLT 106
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|169844029|ref|XP_001828736.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
gi|116510107|gb|EAU93002.1| ATP-dependent RNA helicase drs1 [Coprinopsis cinerea okayama7#130]
Length = 754
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+++ N+ I++A+ GF PT IQ+ +P ALL KDIVG A TGSGKT AF IP+L
Sbjct: 176 FLQMNLSRPILKAISSLGFTKPTPIQASTIPVALLG-KDIVGNAVTGSGKTAAFMIPMLE 234
Query: 64 GIVNK 68
++ +
Sbjct: 235 RLLYR 239
>gi|371777791|ref|ZP_09484113.1| dead/deah box helicase domain protein [Anaerophaga sp. HS1]
Length = 540
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M +V+ + I+ +L GFKTPT IQS +P L + D+V A+TG+GKT AFG+P
Sbjct: 1 MQNFVETGLRPEILESLETIGFKTPTPIQSKTIPYILESENDLVAMAQTGTGKTAAFGLP 60
Query: 61 ILTGI 65
IL I
Sbjct: 61 ILQKI 65
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 392 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 450
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 451 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 494
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 392 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 450
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 451 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 494
>gi|327272750|ref|XP_003221147.1| PREDICTED: probable ATP-dependent RNA helicase DDX47-like isoform
1 [Anolis carolinensis]
Length = 445
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
+ E + A Q G+KTPTKIQ +P AL R DI+G AETGSGKT AF +PIL +
Sbjct: 23 VTEVLCEACDQLGWKTPTKIQVESIPLALQGR-DIIGLAETGSGKTGAFALPILQAL--- 78
Query: 69 LENP 72
LE P
Sbjct: 79 LETP 82
>gi|212379240|gb|ACJ24856.1| putative ATP-dependent RNA helicase [Streptomyces pactum]
Length = 788
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+PE I+R L Q G TP IQ+ +P A+ R DI+G TGSGKTL+FG+P+LT
Sbjct: 94 LPEQIVRKLAQNGVTTPFPIQAATIPDAMAGR-DILGRGRTGSGKTLSFGLPLLT 147
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 373 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 431
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 432 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 475
>gi|209886522|ref|YP_002290379.1| ATP-dependent RNA helicase RhlE [Oligotropha carboxidovorans OM5]
gi|337739955|ref|YP_004631683.1| ATP-dependent RNA helicase RhlE [Oligotropha carboxidovorans OM5]
gi|386028973|ref|YP_005949748.1| ATP-dependent RNA helicase RhlE [Oligotropha carboxidovorans OM4]
gi|209874718|gb|ACI94514.1| putative ATP-dependent RNA helicase RhlE [Oligotropha
carboxidovorans OM5]
gi|336094041|gb|AEI01867.1| ATP-dependent RNA helicase RhlE [Oligotropha carboxidovorans OM4]
gi|336097619|gb|AEI05442.1| ATP-dependent RNA helicase RhlE [Oligotropha carboxidovorans OM5]
Length = 512
Score = 58.9 bits (141), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F + ETI RAL ++ + TPT IQ+ +P A+ R D++G A+TG+GKT +F +P
Sbjct: 1 MTSFQDFGLAETITRALSEENYVTPTPIQAQTIPIAITGR-DVIGIAQTGTGKTASFALP 59
Query: 61 ILTGIVNKLENP 72
IL ++ P
Sbjct: 60 ILHRLLENRVRP 71
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 392 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 450
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 451 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 494
>gi|375082207|ref|ZP_09729275.1| ATP-dependent RNA helicase, DEAD-family protein [Thermococcus
litoralis DSM 5473]
gi|374743095|gb|EHR79465.1| ATP-dependent RNA helicase, DEAD-family protein [Thermococcus
litoralis DSM 5473]
Length = 380
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
K + E+ + A+ +KGFK PT IQ V+P L KDI+G ++TG+GKT AF +P++
Sbjct: 5 KLGLSESSLNAIRRKGFKRPTDIQREVIPRLLGGNKDIIGQSQTGTGKTAAFALPLI 61
>gi|374340782|ref|YP_005097518.1| DNA/RNA helicase [Marinitoga piezophila KA3]
gi|372102316|gb|AEX86220.1| DNA/RNA helicase, superfamily II [Marinitoga piezophila KA3]
Length = 533
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 1 MAEWVKF---NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 57
M + VKF + E+ ++AL +KGF+ PT IQ V+P L D++G A+TG+GKT AF
Sbjct: 1 MEKLVKFEDLGLSESTLKALKKKGFEEPTPIQEKVIPILLQEGIDVIGQAQTGTGKTAAF 60
Query: 58 GIPIL 62
G+P++
Sbjct: 61 GLPLI 65
>gi|397678974|ref|YP_006520509.1| cold-shock DEAD box protein A-like protein [Mycobacterium
massiliense str. GO 06]
gi|418249081|ref|ZP_12875403.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus 47J26]
gi|419711589|ref|ZP_14239052.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus M93]
gi|420930546|ref|ZP_15393822.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-151-0930]
gi|420936028|ref|ZP_15399297.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-152-0914]
gi|420940798|ref|ZP_15404060.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-153-0915]
gi|420946105|ref|ZP_15409358.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-154-0310]
gi|420951063|ref|ZP_15414309.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0626]
gi|420955234|ref|ZP_15418473.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0107]
gi|420960958|ref|ZP_15424186.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-1231]
gi|420991202|ref|ZP_15454354.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0307]
gi|420997038|ref|ZP_15460178.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0912-R]
gi|421001472|ref|ZP_15464602.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0912-S]
gi|353450736|gb|EHB99130.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus 47J26]
gi|382938911|gb|EIC63240.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus M93]
gi|392139564|gb|EIU65296.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-151-0930]
gi|392141543|gb|EIU67268.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-152-0914]
gi|392151585|gb|EIU77293.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-153-0915]
gi|392159313|gb|EIU85009.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 1S-154-0310]
gi|392160840|gb|EIU86531.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0626]
gi|392189282|gb|EIV14916.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0912-R]
gi|392190213|gb|EIV15845.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0307]
gi|392200290|gb|EIV25896.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0912-S]
gi|392254023|gb|EIV79490.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-1231]
gi|392255762|gb|EIV81223.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense 2B-0107]
gi|395457239|gb|AFN62902.1| Cold-shock DEAD box protein A-like protein [Mycobacterium
massiliense str. GO 06]
Length = 598
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +I ++RA+ G++TP+ IQ+ +P LLA D+VG A+TG+GKT AF IPIL+
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPP-LLAGSDVVGLAQTGTGKTAAFAIPILS 83
Query: 64 GI 65
I
Sbjct: 84 KI 85
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|187934290|ref|YP_001887690.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
gi|187722443|gb|ACD23664.1| ATP-dependent RNA helicase RhlE [Clostridium botulinum B str.
Eklund 17B]
Length = 432
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
NI E I RAL + G+ PT IQ +PS LL KD +G A+TG+GKT AF IP+L I
Sbjct: 6 LNIIEPIQRALTEAGYTNPTPIQEQSIPS-LLNGKDFLGCAQTGTGKTAAFAIPVLQNI 63
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|363746013|ref|XP_003643496.1| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial
[Gallus gallus]
Length = 394
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 186 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 244
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 245 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 288
>gi|354584019|ref|ZP_09002916.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
gi|353197281|gb|EHB62774.1| DEAD/DEAH box helicase domain protein [Paenibacillus lactis 154]
Length = 490
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 42/56 (75%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
NI I++AL ++ +KTPT IQ+ +P A+LA +D++G A+TG+GKT AF +P++
Sbjct: 6 LNISPIILKALAKENYKTPTPIQAQAIP-AVLAGRDLLGCAQTGTGKTAAFSVPMI 60
>gi|451998973|gb|EMD91436.1| hypothetical protein COCHEDRAFT_1101623 [Cochliobolus
heterostrophus C5]
Length = 1058
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W + + + + + G++ PT IQ+ P +L R D++G A+TGSGKTLAFGIP
Sbjct: 415 VTKWAQMGLLQATMDVFTRVGYQKPTSIQAQAAPISLSGR-DLIGVAKTGSGKTLAFGIP 473
Query: 61 ILTGIVNK 68
++ I+++
Sbjct: 474 MIRHILDQ 481
>gi|380696525|ref|ZP_09861384.1| ATP-dependent RNA helicase [Bacteroides faecis MAJ27]
Length = 374
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ + NI E I++A+ +KG+ PT IQ +P AL+ R DI+G A+TG+GKT +F IPI+
Sbjct: 3 FKELNITEPILKAVEEKGYTVPTPIQEKAIPVALVKR-DILGCAQTGTGKTASFAIPII 60
>gi|324505355|gb|ADY42303.1| ATP-dependent RNA helicase DDX23 [Ascaris suum]
Length = 515
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +P ++ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP
Sbjct: 84 LRNWAEAGLPSEVLDVIIKIGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIP 142
Query: 61 ILTGIVNKLENPTEEDEN 78
+L I + + + ED++
Sbjct: 143 LLVWITSLPKIQSNEDQD 160
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|421598599|ref|ZP_16041987.1| dead-box ATP-dependent RNA helicase, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404269295|gb|EJZ33587.1| dead-box ATP-dependent RNA helicase, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 359
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F + E I RAL ++ + TPT IQ+ +P AL R D+VG A+TG+GKT +F +P
Sbjct: 1 MTSFQDFGLAEPIARALREENYVTPTPIQAQTVPLALTGR-DVVGIAQTGTGKTASFALP 59
Query: 61 IL 62
IL
Sbjct: 60 IL 61
>gi|365869382|ref|ZP_09408929.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|414582556|ref|ZP_11439696.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1215]
gi|420876743|ref|ZP_15340115.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0304]
gi|420881759|ref|ZP_15345123.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0421]
gi|420888066|ref|ZP_15351420.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0422]
gi|420893793|ref|ZP_15357135.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0708]
gi|420898622|ref|ZP_15361958.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0817]
gi|420903935|ref|ZP_15367256.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1212]
gi|420970934|ref|ZP_15434131.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0921]
gi|421048242|ref|ZP_15511238.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense CCUG 48898 = JCM 15300]
gi|363998839|gb|EHM20045.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium massiliense
CCUG 48898 = JCM 15300]
gi|392090420|gb|EIU16233.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0304]
gi|392090814|gb|EIU16625.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0421]
gi|392092626|gb|EIU18431.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0422]
gi|392102383|gb|EIU28170.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0708]
gi|392107863|gb|EIU33645.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0817]
gi|392109193|gb|EIU34971.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1212]
gi|392117708|gb|EIU43476.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-1215]
gi|392171906|gb|EIU97579.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
5S-0921]
gi|392242407|gb|EIV67894.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium
massiliense CCUG 48898]
Length = 598
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +I ++RA+ G++TP+ IQ+ +P LLA D+VG A+TG+GKT AF IPIL+
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPP-LLAGSDVVGLAQTGTGKTAAFAIPILS 83
Query: 64 GI 65
I
Sbjct: 84 KI 85
>gi|302520727|ref|ZP_07273069.1| ATP-dependent RNA helicase [Streptomyces sp. SPB78]
gi|302429622|gb|EFL01438.1| ATP-dependent RNA helicase [Streptomyces sp. SPB78]
Length = 518
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + +PE I+R L Q G +P IQ+ +P AL A KDI+G TGSGKTL+FG+P+L
Sbjct: 83 FAELGLPENIVRKLTQNGVTSPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPLLA 141
Query: 64 GI 65
+
Sbjct: 142 SL 143
>gi|302654026|ref|XP_003018826.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
gi|291182505|gb|EFE38181.1| hypothetical protein TRV_07145 [Trichophyton verrucosum HKI 0517]
Length = 814
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + ++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF +PI
Sbjct: 297 ASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIVPI 355
Query: 62 L 62
L
Sbjct: 356 L 356
>gi|169628494|ref|YP_001702143.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus ATCC 19977]
gi|419716620|ref|ZP_14244016.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus M94]
gi|420863361|ref|ZP_15326754.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0303]
gi|420867758|ref|ZP_15331143.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RA]
gi|420872190|ref|ZP_15335570.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RB]
gi|420908973|ref|ZP_15372286.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-R]
gi|420915356|ref|ZP_15378661.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-S]
gi|420919746|ref|ZP_15383044.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-S]
gi|420926243|ref|ZP_15389528.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-1108]
gi|420965711|ref|ZP_15428925.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0810-R]
gi|420976589|ref|ZP_15439771.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0212]
gi|420981969|ref|ZP_15445139.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-R]
gi|420986517|ref|ZP_15449678.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0206]
gi|421006515|ref|ZP_15469630.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0119-R]
gi|421011836|ref|ZP_15474929.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-R]
gi|421016756|ref|ZP_15479823.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-S]
gi|421022668|ref|ZP_15485716.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0731]
gi|421028023|ref|ZP_15491060.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-R]
gi|421033882|ref|ZP_15496904.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-S]
gi|421039073|ref|ZP_15502084.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-R]
gi|421042545|ref|ZP_15505550.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-S]
gi|169240461|emb|CAM61489.1| Probable cold-shock DEAD box protein A homolog (ATP-dependent RNA
helicase DEAD homolog) [Mycobacterium abscessus]
gi|382940906|gb|EIC65228.1| cold-shock DEAD box protein A-like protein [Mycobacterium
abscessus M94]
gi|392073161|gb|EIT99001.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RA]
gi|392073881|gb|EIT99719.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0303]
gi|392076379|gb|EIU02212.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0726-RB]
gi|392121347|gb|EIU47112.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-R]
gi|392123040|gb|EIU48802.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0125-S]
gi|392133751|gb|EIU59493.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-S]
gi|392138651|gb|EIU64384.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-1108]
gi|392170848|gb|EIU96525.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0212]
gi|392173987|gb|EIU99653.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
6G-0728-R]
gi|392187934|gb|EIV13573.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0206]
gi|392202267|gb|EIV27864.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0119-R]
gi|392210240|gb|EIV35810.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-R]
gi|392215365|gb|EIV40913.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0731]
gi|392215856|gb|EIV41403.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0122-S]
gi|392227287|gb|EIV52801.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-R]
gi|392230423|gb|EIV55933.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-S]
gi|392231929|gb|EIV57433.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0930-R]
gi|392241611|gb|EIV67099.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
4S-0116-S]
gi|392257699|gb|EIV83148.1| ATP-dependent DEAD-box RNA helicase DeaD [Mycobacterium abscessus
3A-0810-R]
Length = 598
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +I ++RA+ G++TP+ IQ+ +P LLA D+VG A+TG+GKT AF IPIL+
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPP-LLAGSDVVGLAQTGTGKTAAFAIPILS 83
Query: 64 GI 65
I
Sbjct: 84 KI 85
>gi|197100123|ref|NP_001125347.1| probable ATP-dependent RNA helicase DDX23 [Pongo abelii]
gi|67460452|sp|Q5RC67.1|DDX23_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=DEAD box protein 23
gi|55727779|emb|CAH90640.1| hypothetical protein [Pongo abelii]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|392571512|gb|EIW64684.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 772
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ N+ II+++ GF TPT IQ+ +P ALL KD+VG A TGSGKT AF IP+L
Sbjct: 185 FLSMNLSRPIIKSITTLGFTTPTPIQAATIPVALLG-KDVVGNAVTGSGKTAAFIIPMLE 243
Query: 64 GIVNK 68
++ +
Sbjct: 244 RLMYR 248
>gi|258645737|ref|ZP_05733206.1| ATP-dependent RNA helicase DeaD [Dialister invisus DSM 15470]
gi|260403106|gb|EEW96653.1| ATP-dependent RNA helicase DeaD [Dialister invisus DSM 15470]
Length = 424
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++K + E + +ALYQ+G + PT IQ +P A+ KDI+G +ETG+GKTLA+ +P
Sbjct: 1 MNAFIKLGVIEPLAQALYQQGIRFPTVIQQASIP-AIFKGKDIIGRSETGTGKTLAYLLP 59
Query: 61 IL 62
++
Sbjct: 60 LV 61
>gi|449680655|ref|XP_002168566.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Hydra
magnipapillata]
Length = 585
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 23/133 (17%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL--- 62
+FN+P I++ + + GF+ PT IQ +P +L ++++ A TGSGKTLAF +PIL
Sbjct: 163 RFNVPTIIMKNVKENGFEVPTPIQMQAIP-VILQHREMLACAPTGSGKTLAFILPILCHL 221
Query: 63 -----TGIVNKLENPTEEDENDSARK------------DIVGAAETGSGKTLAFGIPILT 105
TGI + +PT E R+ DI+ A+ + K+ A I I T
Sbjct: 222 KESKKTGIRAVIVSPTRELSQQIYREFVRMNAGIGLKIDILTKAKINNFKSKACDILIST 281
Query: 106 GIVNKLENPTEED 118
N+L + ++D
Sbjct: 282 P--NRLVHLLKQD 292
>gi|444305942|ref|ZP_21141717.1| DNA/RNA helicase [Arthrobacter sp. SJCon]
gi|443481746|gb|ELT44666.1| DNA/RNA helicase [Arthrobacter sp. SJCon]
Length = 557
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +N+ E I+ +L G P IQ+M +P AL + DI+G A+TG+GKTL FGIP L
Sbjct: 39 FADYNVREDIVESLADAGITHPFPIQAMTLPVAL-SGHDIIGQAKTGTGKTLGFGIPALQ 97
Query: 64 GIVNK 68
++ +
Sbjct: 98 RVIGQ 102
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|418419638|ref|ZP_12992821.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium abscessus
subsp. bolletii BD]
gi|364001268|gb|EHM22464.1| cold-shock DEAD box protein A-like protein (ATP-dependent RNA
helicase DEAD-like protein) [Mycobacterium abscessus
subsp. bolletii BD]
Length = 598
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +I ++RA+ G++TP+ IQ+ +P LLA D+VG A+TG+GKT AF IPIL+
Sbjct: 25 FADLHIAPEVLRAVSDVGYETPSAIQAATIPP-LLAGSDVVGLAQTGTGKTAAFAIPILS 83
Query: 64 GI 65
I
Sbjct: 84 KI 85
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 392 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 450
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 451 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 494
>gi|189205421|ref|XP_001939045.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975138|gb|EDU41764.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 690
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + +P+ ++R + Q G+ PT IQ +P AL R D++G A+TGSGKT AF +P
Sbjct: 268 MRNWQEAGLPDQLMRIVDQVGYTEPTPIQRAAIPIALQCR-DLIGVAKTGSGKTAAFLLP 326
Query: 61 ILTGI 65
+L I
Sbjct: 327 LLAYI 331
>gi|115352406|ref|YP_774245.1| DEAD/DEAH box helicase [Burkholderia ambifaria AMMD]
gi|115282394|gb|ABI87911.1| DEAD/DEAH box helicase domain protein [Burkholderia ambifaria
AMMD]
Length = 497
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + +F + I++A+ ++G+ TPT IQ+ +P +LA +D++GAA+TG+GKT +F +PI
Sbjct: 11 ATFDQFGLAADILKAIAEQGYTTPTPIQAQAIP-VVLAGRDVMGAAQTGTGKTASFSLPI 69
Query: 62 L 62
+
Sbjct: 70 I 70
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 392 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 450
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 451 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 494
>gi|326481966|gb|EGE05976.1| 2-isopropylmalate synthase [Trichophyton equinum CBS 127.97]
Length = 638
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + ++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF +PI
Sbjct: 296 ASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIVPI 354
Query: 62 L 62
L
Sbjct: 355 L 355
>gi|302499800|ref|XP_003011895.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
gi|291175449|gb|EFE31255.1| hypothetical protein ARB_01875 [Arthroderma benhamiae CBS 112371]
Length = 814
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + ++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF +PI
Sbjct: 297 ASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIVPI 355
Query: 62 L 62
L
Sbjct: 356 L 356
>gi|313146179|ref|ZP_07808372.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|423279249|ref|ZP_17258162.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
gi|313134946|gb|EFR52306.1| ATP-dependent RNA helicase [Bacteroides fragilis 3_1_12]
gi|404585418|gb|EKA90034.1| hypothetical protein HMPREF1203_02379 [Bacteroides fragilis HMW
610]
Length = 427
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
N+ E I++AL Q+G+ +PT IQ +P LL KD++G A+TG+GKT AF IPIL
Sbjct: 6 LNLIEPILKALRQEGYTSPTPIQEQSIP-ILLQGKDLLGCAQTGTGKTAAFSIPIL 60
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 371 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 429
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 430 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 473
>gi|53712950|ref|YP_098942.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60681162|ref|YP_211306.1| ATP-dependent RNA helicase [Bacteroides fragilis NCTC 9343]
gi|265763047|ref|ZP_06091615.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|383117799|ref|ZP_09938542.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|423249596|ref|ZP_17230612.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|423256091|ref|ZP_17237019.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|423258064|ref|ZP_17238987.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|423264968|ref|ZP_17243971.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|423268460|ref|ZP_17247432.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|423273980|ref|ZP_17252927.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|423285051|ref|ZP_17263934.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
gi|52215815|dbj|BAD48408.1| ATP-dependent RNA helicase DeaD [Bacteroides fragilis YCH46]
gi|60492596|emb|CAH07368.1| putative ATP-dependent RNA helicase [Bacteroides fragilis NCTC
9343]
gi|251946848|gb|EES87130.1| hypothetical protein BSHG_0049 [Bacteroides sp. 3_2_5]
gi|263255655|gb|EEZ27001.1| ATP-dependent RNA helicase DeaD [Bacteroides sp. 2_1_16]
gi|387777510|gb|EIK39607.1| hypothetical protein HMPREF1055_01264 [Bacteroides fragilis
CL07T00C01]
gi|392649282|gb|EIY42960.1| hypothetical protein HMPREF1067_03663 [Bacteroides fragilis
CL03T12C07]
gi|392655681|gb|EIY49323.1| hypothetical protein HMPREF1066_01622 [Bacteroides fragilis
CL03T00C08]
gi|392703744|gb|EIY96885.1| hypothetical protein HMPREF1079_00514 [Bacteroides fragilis
CL05T00C42]
gi|392704701|gb|EIY97836.1| hypothetical protein HMPREF1056_01658 [Bacteroides fragilis
CL07T12C05]
gi|392707413|gb|EIZ00532.1| hypothetical protein HMPREF1080_01580 [Bacteroides fragilis
CL05T12C13]
gi|404579640|gb|EKA84354.1| hypothetical protein HMPREF1204_03472 [Bacteroides fragilis HMW
615]
Length = 427
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
N+ E I++AL Q+G+ +PT IQ +P LL KD++G A+TG+GKT AF IPIL
Sbjct: 6 LNLIEPILKALRQEGYTSPTPIQEQSIP-ILLQGKDLLGCAQTGTGKTAAFSIPIL 60
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|425770601|gb|EKV09069.1| hypothetical protein PDIP_65800 [Penicillium digitatum Pd1]
gi|425772047|gb|EKV10473.1| hypothetical protein PDIG_56240 [Penicillium digitatum PHI26]
Length = 1500
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+FN+ I+R L GF PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 308 EFNLSRPILRGLAAVGFTDPTPIQRKAIPVALLG-KDIVGSAVTGSGKTAAFIVPIL 363
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 392 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 450
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 451 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 494
>gi|424662680|ref|ZP_18099717.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
gi|404576370|gb|EKA81108.1| hypothetical protein HMPREF1205_03066 [Bacteroides fragilis HMW
616]
Length = 427
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
N+ E I++AL Q+G+ +PT IQ +P LL KD++G A+TG+GKT AF IPIL
Sbjct: 6 LNLIEPILKALRQEGYTSPTPIQEQSIP-ILLQGKDLLGCAQTGTGKTAAFSIPIL 60
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>gi|354543099|emb|CCE39817.1| hypothetical protein CPAR2_602350 [Candida parapsilosis]
Length = 573
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W N+ +++A+ + GF+ PT IQS +P AL ++DI+ A TGSGKT A+ +PI+
Sbjct: 18 WKSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYALPIIQ 77
Query: 64 GIV 66
++
Sbjct: 78 NLL 80
>gi|327295054|ref|XP_003232222.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
gi|326465394|gb|EGD90847.1| ATP-dependent RNA helicase DRS1 [Trichophyton rubrum CBS 118892]
Length = 813
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A + ++ I+R L GF TPT IQ +P ALL KD+VG A TGSGKT AF +PI
Sbjct: 296 ASFQNLSLSRPILRGLASVGFSTPTPIQRKTIPVALLG-KDVVGGAVTGSGKTGAFIVPI 354
Query: 62 L 62
L
Sbjct: 355 L 355
>gi|157877414|ref|XP_001687024.1| ATP-dependent RNA helicase-like protein [Leishmania major strain
Friedlin]
gi|68130099|emb|CAJ09407.1| ATP-dependent RNA helicase-like protein [Leishmania major strain
Friedlin]
Length = 964
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSAL------LARKDIVGAAETGSGKTLAF 57
W + + +++AL F PT +Q V+P+ L LAR+ A + A
Sbjct: 193 WERVGLHPALLQALRDLHFTHPTPVQEEVLPNVLASGDEGLARQRSSEADKKSKKHKRAG 252
Query: 58 GIPILTGIVNKLENPTEEDENDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP-TE 116
G DSA D+V +AETGSGKTL F +PIL ++ L+
Sbjct: 253 GAA------------------DSAGHDVVVSAETGSGKTLVFALPILQDLLTTLDTERVS 294
Query: 117 EDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNK--LYALILAPTRELAIQ 167
S E E+ + ++A +K R K +++LI++PTRELA+Q
Sbjct: 295 AVTPTSSAEAVHEKATGQASSDAAVARAELKAKRQKRIMHSLIISPTRELALQ 347
>gi|88808892|ref|ZP_01124401.1| putative ATP-dependent RNA helicase [Synechococcus sp. WH 7805]
gi|88786834|gb|EAR17992.1| putative ATP-dependent RNA helicase [Synechococcus sp. WH 7805]
Length = 607
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F E ++R L +KG+K P+ IQ P +L R D+VG A+TG+GKT AF +P+L
Sbjct: 59 FAGFGFSEALLRTLEEKGYKEPSPIQKAAFPELMLGR-DLVGQAQTGTGKTAAFALPLLE 117
Query: 64 GIVNKLENP 72
+ + P
Sbjct: 118 RLEGRSSKP 126
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 391 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 449
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 450 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 493
>gi|375357970|ref|YP_005110742.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
gi|301162651|emb|CBW22198.1| putative ATP-dependent RNA helicase [Bacteroides fragilis 638R]
Length = 427
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
N+ E I++AL Q+G+ +PT IQ +P LL KD++G A+TG+GKT AF IPIL
Sbjct: 6 LNLIEPILKALRQEGYTSPTPIQEQSIP-ILLQGKDLLGCAQTGTGKTAAFSIPIL 60
>gi|254582140|ref|XP_002497055.1| ZYRO0D14388p [Zygosaccharomyces rouxii]
gi|238939947|emb|CAR28122.1| ZYRO0D14388p [Zygosaccharomyces rouxii]
Length = 583
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENP 72
+++A+ + GF PT IQS +P AL ++DI+ A TGSGKTLA+ IP++ I+N E
Sbjct: 29 LLQAVKRNGFLHPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPVIQTILNYKE-- 86
Query: 73 TEEDEND 79
+ +DEND
Sbjct: 87 SLQDEND 93
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 30/86 (34%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
++DI+ A TGSGKTLA+ IP++ I+N E + +DEND
Sbjct: 56 KRDIIAKAATGSGKTLAYLIPVIQTILNYKE--SLQDEND-------------------- 93
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
+N+ ++L PT+ELA Q
Sbjct: 94 --------QNQTLGIVLVPTKELANQ 111
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 391 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 449
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 450 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 493
>gi|108800931|ref|YP_641128.1| DEAD/DEAH box helicase [Mycobacterium sp. MCS]
gi|119870071|ref|YP_940023.1| DEAD/DEAH box helicase [Mycobacterium sp. KMS]
gi|126436556|ref|YP_001072247.1| DEAD/DEAH box helicase [Mycobacterium sp. JLS]
gi|108771350|gb|ABG10072.1| ATP-dependent RNA helicase CsdA [Mycobacterium sp. MCS]
gi|119696160|gb|ABL93233.1| ATP-dependent RNA helicase CsdA [Mycobacterium sp. KMS]
gi|126236356|gb|ABN99756.1| ATP-dependent RNA helicase CsdA [Mycobacterium sp. JLS]
Length = 557
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ I ++RA+ G++TP+ IQ+ +P A+LA D+VG A+TG+GKT AF IPIL+
Sbjct: 15 FADLQIHPEVLRAVTDVGYETPSAIQAATIP-AMLAGSDVVGLAQTGTGKTAAFAIPILS 73
Query: 64 GI 65
I
Sbjct: 74 KI 75
>gi|117919411|ref|YP_868603.1| DEAD/DEAH box helicase [Shewanella sp. ANA-3]
gi|117611743|gb|ABK47197.1| DEAD/DEAH box helicase domain protein [Shewanella sp. ANA-3]
Length = 443
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 21 GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLEN 71
G K PT++Q + +P A+LA +D++ ++TGSGKTLAFG+P+L I +LE+
Sbjct: 35 GLKHPTRVQQLAIP-AILAGRDVLALSQTGSGKTLAFGLPLLQAIHQQLES 84
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 32/87 (36%)
Query: 81 ARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESA 140
A +D++ ++TGSGKTLAFG+P+L I +LE+
Sbjct: 52 AGRDVLALSQTGSGKTLAFGLPLLQAIHQQLES--------------------------- 84
Query: 141 NTTEFVKKTRNKLYALILAPTRELAIQ 167
V + K AL+L PTRELA Q
Sbjct: 85 -----VSSSACKAQALVLVPTRELAQQ 106
>gi|410944765|ref|ZP_11376506.1| ATP-dependent RNA helicase [Gluconobacter frateurii NBRC 101659]
Length = 434
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + + N+ E I +AL ++G+ TPT IQ+ +P LL +D++G A+TG+GKT AF +P
Sbjct: 1 MTSFAELNLAEPIQKALAEEGYTTPTPIQAGAIPH-LLEGRDLLGLAQTGTGKTAAFALP 59
Query: 61 ILTGIVNKLENP 72
IL ++ P
Sbjct: 60 ILDYLLRNRRPP 71
>gi|393240212|gb|EJD47739.1| DEAD-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 778
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
++ N+ I++AL F TPT IQ+ +P ALL KDIVG A TGSGKT AF IP+L
Sbjct: 175 FLSMNLSRPILKALTALNFHTPTPIQASTIPVALLG-KDIVGNAVTGSGKTAAFVIPMLE 233
Query: 64 GIVNK 68
++ +
Sbjct: 234 RLLYR 238
>gi|388851757|emb|CCF54563.1| related to RNA helicase [Ustilago hordei]
Length = 1171
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+W +P + + + + G+ PT IQS +P A+++ +DI+G A+TGSGKT+AF +P+
Sbjct: 495 KWSHCGLPASALDVIKKLGYAAPTPIQSQAVP-AIMSGRDIIGVAKTGSGKTMAFLLPMF 553
Query: 63 TGIVNKLENPTEEDE 77
I K + P E E
Sbjct: 554 RHI--KDQRPVEPSE 566
>gi|239988942|ref|ZP_04709606.1| putative ATP-dependent RNA helicase [Streptomyces roseosporus NRRL
11379]
gi|291445934|ref|ZP_06585324.1| ATP-dependent RNA helicase [Streptomyces roseosporus NRRL 15998]
gi|291348881|gb|EFE75785.1| ATP-dependent RNA helicase [Streptomyces roseosporus NRRL 15998]
Length = 742
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 9 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+PE I+R L Q G TP IQ+ +P AL A KDI+G TGSGKTL+FG+P L +
Sbjct: 66 LPEGIVRKLAQNGVTTPFPIQAATIPDAL-AGKDILGRGRTGSGKTLSFGLPTLAAL 121
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 391 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 449
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 450 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 493
>gi|198425972|ref|XP_002127372.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
[Ciona intestinalis]
Length = 790
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 8 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 67
++P I+ +++ G+K PT IQ +P L R DI+G AETGSGKT AF IP+L I +
Sbjct: 368 DLPPEIVEVIHRIGYKDPTPIQRQAIPIGFLNR-DIIGVAETGSGKTAAFLIPLLAWITS 426
>gi|170742455|ref|YP_001771110.1| DEAD/DEAH box helicase [Methylobacterium sp. 4-46]
gi|168196729|gb|ACA18676.1| DEAD/DEAH box helicase domain protein [Methylobacterium sp. 4-46]
Length = 482
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + + E +++A+ G+ TPT IQ+ +P +LAR+D++G A+TG+GKT AF +P+LT
Sbjct: 3 FAELGLSEKVLQAVSAAGYTTPTPIQAQAIPH-VLARRDVLGVAQTGTGKTAAFTLPMLT 61
>gi|57640241|ref|YP_182719.1| DEAD/DEAH box helicase [Thermococcus kodakarensis KOD1]
gi|57158565|dbj|BAD84495.1| DEAD/DEAH box RNA helicase [Thermococcus kodakarensis KOD1]
Length = 406
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 14 IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+ A+ +KGF PT IQ V+P L A DIVG ++TGSGKT AFG+PIL I
Sbjct: 13 VEAVERKGFSIPTDIQREVIPLLLSAESDIVGQSKTGSGKTAAFGLPILDSI 64
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 40/88 (45%), Gaps = 39/88 (44%)
Query: 80 SARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 139
SA DIVG ++TGSGKT AFG+PIL I +E + E++
Sbjct: 37 SAESDIVGQSKTGSGKTAAFGLPILDSI---------------------DESIREVQ--- 72
Query: 140 ANTTEFVKKTRNKLYALILAPTRELAIQ 167
ALIL PTRELAIQ
Sbjct: 73 ---------------ALILTPTRELAIQ 85
>gi|33861657|ref|NP_893218.1| ATP-dependent RNA helicase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33634234|emb|CAE19560.1| putative ATP-dependent RNA helicase [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 592
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ F + I+ +L KG+KTPT IQ +P +L R D++G A+TG+GKT AF +P
Sbjct: 52 FACFGFNKLILNSLESKGYKTPTPIQKAAIPELMLGR-DLLGQAQTGTGKTAAFALP--- 107
Query: 64 GIVNKLENPTEED 76
++ KLEN E +
Sbjct: 108 -LIEKLENNKESN 119
>gi|399048154|ref|ZP_10739853.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
gi|398053887|gb|EJL46038.1| DNA/RNA helicase, superfamily II [Brevibacillus sp. CF112]
Length = 503
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M + F + +++RAL GF+ T IQ +P AL R D++G A+TG+GKT AFGIP
Sbjct: 1 MTTFYDFGLHHSVVRALGNMGFEEATAIQEQTVPVALQGR-DLIGQAQTGTGKTAAFGIP 59
Query: 61 IL 62
++
Sbjct: 60 LV 61
>gi|385305034|gb|EIF49032.1| atp-dependent rna helicase rok1 [Dekkera bruxellensis AWRI1499]
Length = 574
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 11/89 (12%)
Query: 6 KFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
+F + T++ L ++GF PT IQ +P+A+ R DI+G A TGSGKTLAF IP++ +
Sbjct: 119 RFKLNRTLLDNLLKEGFTEPTPIQCEAIPAAMYDR-DIIGCAPTGSGKTLAFLIPLVQSL 177
Query: 66 VNKLENPTEEDENDSARKDIVGAAETGSG 94
++ + S + + G + GSG
Sbjct: 178 LDFI----------SPKNSVKGKSTKGSG 196
>gi|330925821|ref|XP_003301209.1| hypothetical protein PTT_12655 [Pyrenophora teres f. teres 0-1]
gi|311324270|gb|EFQ90696.1| hypothetical protein PTT_12655 [Pyrenophora teres f. teres 0-1]
Length = 690
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M W + +P+ ++R + Q G+ PT IQ +P AL R D++G A+TGSGKT AF +P
Sbjct: 268 MRNWQEAGLPDQLMRIVDQVGYTEPTPIQRAAIPIALQCR-DLIGVAKTGSGKTAAFLLP 326
Query: 61 ILTGI 65
+L I
Sbjct: 327 LLAYI 331
>gi|255724828|ref|XP_002547343.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
gi|240135234|gb|EER34788.1| hypothetical protein CTRG_01650 [Candida tropicalis MYA-3404]
Length = 711
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 4 WVKFNIPETI----IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
W K ++ +I + L Q GF+ PT IQ +P AL KD++G A TGSGKTLA+GI
Sbjct: 115 WQKGDLGSSISGYTLNGLSQLGFQKPTPIQKETIPIALQG-KDVIGKATTGSGKTLAYGI 173
Query: 60 PILTGIVNKL 69
PIL + L
Sbjct: 174 PILEKYIQSL 183
>gi|160902412|ref|YP_001567993.1| DEAD/DEAH box helicase domain-containing protein [Petrotoga
mobilis SJ95]
gi|160360056|gb|ABX31670.1| DEAD/DEAH box helicase domain protein [Petrotoga mobilis SJ95]
Length = 530
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M ++ + + + I+ A+ +KG++ PT IQ V+P L + +++G A+TG+GKT AFGIP
Sbjct: 1 MTKFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIP 60
Query: 61 IL 62
++
Sbjct: 61 LI 62
>gi|119578414|gb|EAW58010.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_a [Homo
sapiens]
Length = 634
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 207 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 265
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPILTGIVNKLENPTE 116
I K++ E D+ A I+ A A+ +T+ FG P+ V + +
Sbjct: 266 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISR 322
Query: 117 EDE 119
ED+
Sbjct: 323 EDQ 325
>gi|403048764|ref|ZP_10903248.1| DEAD/DEAH box helicase [SAR86 cluster bacterium SAR86D]
Length = 92
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ E+ N+ + I+R+L + +K PT IQ+ V+P A+L + DI+ AA+TG+GKT AF +P
Sbjct: 18 LNEFNDLNLSDPILRSLKDQNYKEPTPIQAEVIP-AILNKSDIMAAAQTGTGKTAAFVLP 76
Query: 61 ILTGIVN 67
IL+ + N
Sbjct: 77 ILSILSN 83
>gi|227496195|ref|ZP_03926501.1| superfamily II helicase [Actinomyces urogenitalis DSM 15434]
gi|226834278|gb|EEH66661.1| superfamily II helicase [Actinomyces urogenitalis DSM 15434]
Length = 762
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ +P +++A+ G+ TPT IQ +P LL+ +D+VG A+TG+GKT AFG+P+L
Sbjct: 124 FADLGLPADLLKAVTDMGYVTPTAIQREAIP-VLLSGRDVVGVAQTGTGKTAAFGLPLLD 182
Query: 64 GI 65
+
Sbjct: 183 AV 184
>gi|395538709|ref|XP_003771317.1| PREDICTED: probable ATP-dependent RNA helicase DDX47 isoform 2
[Sarcophilus harrisii]
Length = 411
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 4/66 (6%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
+ E + A Q G+KTPTKIQ +P AL R DI+G AETGSGKT AF +PIL +
Sbjct: 30 LGVTEVLCDACDQLGWKTPTKIQIEAIPMALEGR-DIIGLAETGSGKTGAFALPILNAL- 87
Query: 67 NKLENP 72
LE P
Sbjct: 88 --LETP 91
>gi|383820631|ref|ZP_09975884.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium phlei RIVM601174]
gi|383334548|gb|EID12986.1| ATP-dependent rna helicase, dead/deah box family protein
[Mycobacterium phlei RIVM601174]
Length = 559
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%), Gaps = 1/59 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGI 65
I +++RA+ G++TP+ IQ+ +P A+LA D+VG A+TG+GKT AF IP+L+ I
Sbjct: 18 LQIHPSVLRAIADVGYETPSAIQAATIP-AMLAGSDVVGLAQTGTGKTAAFAIPLLSKI 75
>gi|333895980|ref|YP_004469854.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333111245|gb|AEF16182.1| DEAD/DEAH box helicase domain protein [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 513
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ + ++ E I++A+ GF+ P+KIQS V+P LL D++G AETG+GKTLA+G PI+
Sbjct: 2 DFKELHLNEKILKAIDDMGFEEPSKIQSEVIP-VLLEGLDVIGQAETGTGKTLAYGAPII 60
Query: 63 TGI 65
Sbjct: 61 NNF 63
>gi|289208228|ref|YP_003460294.1| DEAD/DEAH box helicase [Thioalkalivibrio sp. K90mix]
gi|288943859|gb|ADC71558.1| DEAD/DEAH box helicase domain protein [Thioalkalivibrio sp.
K90mix]
Length = 627
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
+ + + E++ RAL Q GF TPT +Q+ +P ALLA D++G A+TG+GKT AFG+P++
Sbjct: 7 FAELGLSESLARALLQLGFTTPTPVQAACIP-ALLAGDDVLGEAQTGTGKTGAFGLPLID 65
Query: 64 GI 65
I
Sbjct: 66 SI 67
>gi|39936732|ref|NP_949008.1| ATP-dependent RNA helicase [Rhodopseudomonas palustris CGA009]
gi|192292558|ref|YP_001993163.1| DEAD/DEAH box helicase [Rhodopseudomonas palustris TIE-1]
gi|39650588|emb|CAE29111.1| putative ATP-dependent RNA helicase [Rhodopseudomonas palustris
CGA009]
gi|192286307|gb|ACF02688.1| DEAD/DEAH box helicase domain protein [Rhodopseudomonas palustris
TIE-1]
Length = 474
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ + +F + + I RAL ++ + TPT IQ+ +P AL R D+VG A+TG+GKT +F +P
Sbjct: 8 LTSFQEFGLADPIARALQEENYHTPTPIQAQTIPLALAGR-DVVGIAQTGTGKTASFALP 66
Query: 61 ILTGIVNKLENPTEE 75
IL ++ P +
Sbjct: 67 ILHRLLQNRIKPASK 81
>gi|254671737|emb|CBA09550.1| putative ATP-dependent RNA helicase [Neisseria meningitidis
alpha153]
Length = 399
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
++ N+ + I+ A+ +G+++PT IQ+ +PSAL R DI+ +A+TGSGKT AF +P L
Sbjct: 4 KFADLNLDKNILSAVSSEGYESPTPIQAQAIPSALEGR-DIMASAQTGSGKTAAFLLPTL 62
Query: 63 TGIVNKLENP 72
+ + E P
Sbjct: 63 QKLTKRSEKP 72
>gi|399887624|ref|ZP_10773501.1| ATP-dependent RNA helicase [Clostridium arbusti SL206]
Length = 479
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + FNI II L + G+K PT++Q V+P +L KDI+ ++TGSGKT AF IP
Sbjct: 1 MANFNGFNIDNEIILCLDKLGYKNPTEVQEKVIP-LVLKNKDIIVKSQTGSGKTAAFAIP 59
Query: 61 IL 62
I
Sbjct: 60 IC 61
>gi|442320812|ref|YP_007360833.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus
DSM 14675]
gi|441488454|gb|AGC45149.1| putative ATP-dependent RNA helicase RhlE [Myxococcus stipitatus
DSM 14675]
Length = 497
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
+ +T++RA+ +G+ TPT IQ+ +P AL A KD++G A+TG+GKT AF +PIL
Sbjct: 6 LQLHDTLLRAVKAEGYTTPTPIQAKAIPHAL-AGKDVLGVAQTGTGKTAAFALPIL 60
>gi|374583452|ref|ZP_09656546.1| DNA/RNA helicase, superfamily II [Desulfosporosinus youngiae DSM
17734]
gi|374419534|gb|EHQ91969.1| DNA/RNA helicase, superfamily II [Desulfosporosinus youngiae DSM
17734]
Length = 495
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA + N+ E+++R++ GF+ T +Q +P A+ R D++G A+TG+GKT A+GIP
Sbjct: 1 MATFTDLNLSESVMRSIINMGFEETTPVQEQTIPIAMEGR-DLIGQAQTGTGKTAAYGIP 59
Query: 61 ILTGIVNKLEN 71
++ +V + E+
Sbjct: 60 LVERLVGQAEH 70
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.130 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,681,052,109
Number of Sequences: 23463169
Number of extensions: 113052549
Number of successful extensions: 817407
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9278
Number of HSP's successfully gapped in prelim test: 13933
Number of HSP's that attempted gapping in prelim test: 753362
Number of HSP's gapped (non-prelim): 67215
length of query: 167
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 39
effective length of database: 9,355,909,735
effective search space: 364880479665
effective search space used: 364880479665
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)