BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11948
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum
GN=ddx24 PE=3 SV=1
Length = 940
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EW +N+ I++ L GF PT+IQS V+P A+ + D++GAA+TGSGKTLAFGIP
Sbjct: 293 MSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIP 352
Query: 61 ILTGIVNKLENPTEEDENDSARK 83
++ I+ L + EN + ++
Sbjct: 353 MVQRILQHLRKHGQNVENKANKQ 375
>sp|Q9GZR7|DDX24_HUMAN ATP-dependent RNA helicase DDX24 OS=Homo sapiens GN=DDX24 PE=1 SV=1
Length = 859
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 99/215 (46%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPTE----------------------EDENDSARKDIV------- 86
++ ++ N P+ E E+D+ D V
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRTEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 87 ------GAAETG---SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
A+TG S + L FG + ++ + P + + + L++E L
Sbjct: 311 SDIAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 370
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 371 QELDDKSATCKAYPKRP---LLGLVLTPTRELAVQ 402
>sp|Q5RDL2|DDX24_PONAB ATP-dependent RNA helicase DDX24 OS=Pongo abelii GN=DDX24 PE=2 SV=1
Length = 859
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 98/215 (45%), Gaps = 51/215 (23%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P ++RAL GF PT IQ + + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 191 VSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTLAFAIP 250
Query: 61 ILTGIV-----NKLENPTE----------------------EDENDSARKDIV------- 86
++ ++ N P+ E E+D+ D V
Sbjct: 251 MIHAVLQWQKRNAAPPPSNTEAPPGETRPEAGAETRSPGKAEAESDALPDDTVIESEALP 310
Query: 87 ------GAAETG---SGKTLAFGIPIL----TGIVNKLENPTEEDENDSGLEEEAEEVL- 132
A+TG S + L FG + ++ + P + + + L++E L
Sbjct: 311 SDTAAEARAKTGGTVSDQALLFGDDDAGEGPSSLIREKPVPKQNENEEENLDKEQTGNLK 370
Query: 133 EELEEESANTTEFVKKTRNKLYALILAPTRELAIQ 167
+EL+++SA + K+ L L+L PTRELA+Q
Sbjct: 371 QELDDKSATCKTYPKRP---LLGLVLTPTRELAVQ 402
>sp|Q9ESV0|DDX24_MOUSE ATP-dependent RNA helicase DDX24 OS=Mus musculus GN=Ddx24 PE=1 SV=2
Length = 857
Score = 70.9 bits (172), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTLAF IP
Sbjct: 192 VSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTLAFAIP 251
Query: 61 ILTGIV--NKLENP-----------------------------------------TEEDE 77
++ ++ +K++ P TE
Sbjct: 252 MIHSVLQWHKMKAPPIPRSTGMPPREMRFGATAHLGSPCKDRTESGVLPEEARIETEAQP 311
Query: 78 NDSARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEE 137
+DS + + + S +TL + LE +N+ G E+ E +L++
Sbjct: 312 SDSGVQATPETSASASAQTLLVCDDDAGEGPSSLEEKPVPKQNEDGEEKFDAEQAGKLKQ 371
Query: 138 ESANTTEFVK-KTRNKLYALILAPTRELAIQ 167
E + K R L L+L PTRELAIQ
Sbjct: 372 ELCDQIAIYKVHPRRPLLGLVLTPTRELAIQ 402
>sp|A3AVH5|RH13_ORYSJ DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp.
japonica GN=Os04g0510400 PE=2 SV=2
Length = 832
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +I A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+PIL
Sbjct: 200 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 259
Query: 64 GIVNKLENPTEEDENDSARKD 84
++ + E D + +D
Sbjct: 260 RLLEEQEKAMRLSREDESTQD 280
>sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp.
indica GN=OsI_016050 PE=2 SV=2
Length = 832
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + + +I A+ + GFK PT IQ P+A KD++GAAETGSGKTLAFG+PIL
Sbjct: 200 WRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVIGAAETGSGKTLAFGLPILQ 259
Query: 64 GIVNKLENPTEEDENDSARKD 84
++ + E D + +D
Sbjct: 260 RLLEEQEKAMRLSREDESTQD 280
>sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana
GN=RH13 PE=2 SV=3
Length = 826
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 61 ILTGIVNKLE 70
IL ++++ E
Sbjct: 249 ILQRLLDERE 258
>sp|Q4IBS2|MAK5_GIBZE ATP-dependent RNA helicase MAK5 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MAK5 PE=3
SV=2
Length = 781
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
MA WV N+ II A+ + F PTKIQ +P ++A D++G A+TGSGKTLAFGIP
Sbjct: 214 MAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE-IVAGHDVIGKAQTGSGKTLAFGIP 272
Query: 61 IL 62
++
Sbjct: 273 MV 274
>sp|A5DF03|PRP28_PICGU Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP28 PE=3 SV=2
Length = 575
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ W + IP T++ + Q G+K PT IQ +P+AL +D+VG AETGSGKTLAF IP
Sbjct: 149 LRSWKESGIPTTLLNTIDQLGYKEPTPIQRAAIPTAL-GHRDVVGIAETGSGKTLAFLIP 207
Query: 61 ILT 63
+L+
Sbjct: 208 LLS 210
>sp|A7EAY2|MAK5_SCLS1 ATP-dependent RNA helicase mak5 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=mak5 PE=3 SV=1
Length = 780
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
WV+ ++ + AL + GF PT IQS +P +LA D+VG A TGSGKTLAFGIPI+
Sbjct: 215 WVELDLSSNTLMALSKMGFSKPTPIQSEAIPE-VLAGHDVVGKASTGSGKTLAFGIPIV 272
>sp|O74393|MAK5_SCHPO ATP-dependent RNA helicase mak5 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=mak5 PE=1 SV=1
Length = 648
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W F++ ++ +L + GF P IQS+V+P A + DI+G A+TGSGKTLAFGIP
Sbjct: 121 VSAWAHFSLSPEMLGSLSKAGFSKPMPIQSLVIPEASIGF-DIIGKADTGSGKTLAFGIP 179
Query: 61 ILTGIVNKLE 70
IL + ++
Sbjct: 180 ILEHCLRNVD 189
>sp|A5DDF4|PRP5_PICGU Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PRP5 PE=3 SV=2
Length = 862
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 49/69 (71%), Gaps = 2/69 (2%)
Query: 1 MAEWVKFNIPETIIRALYQK-GFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ +W + +P +I+ L +K G+ TP+ IQS +P A+++ +DI+G A TGSGKTLAF I
Sbjct: 265 IQKWAQLGLPSSIMTVLEEKLGYDTPSPIQSQALP-AIMSGRDIIGVANTGSGKTLAFVI 323
Query: 60 PILTGIVNK 68
P++ I+++
Sbjct: 324 PLIRHIMDQ 332
>sp|Q5A4P9|DBP9_CANAL ATP-dependent RNA helicase DBP9 OS=Candida albicans (strain
SC5314 / ATCC MYA-2876) GN=DBP9 PE=3 SV=1
Length = 574
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W FN+ +++A+ Q GF PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 16 WDSFNLDPRLLQAIDQLGFSNPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYCIPIVN 75
Query: 64 GIV 66
++
Sbjct: 76 NLL 78
>sp|Q2UMY7|MAK5_ASPOR ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=mak5 PE=3 SV=1
Length = 757
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W + I+ + + F TPT +Q +P L R D++G A TGSGKTLAFGIP
Sbjct: 183 VSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKASTGSGKTLAFGIP 241
Query: 61 ILTGIVNKLENPTEED 76
IL + KL + T++D
Sbjct: 242 ILEYYLEKLRSKTQKD 257
>sp|A5DC85|DBP9_PICGU ATP-dependent RNA helicase DBP9 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=DBP9 PE=3 SV=2
Length = 586
Score = 62.8 bits (151), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
A+W F + +++A+YQ GF+ PT IQS +P +L ++DI+ A TGSGKT A+ IPI
Sbjct: 35 AKWENFKLDPRLLQAVYQLGFEKPTLIQSNAIPLSLEDKRDIIAKASTGSGKTGAYSIPI 94
Query: 62 LTGIVNK 68
+ I+++
Sbjct: 95 IQNILSE 101
>sp|Q09719|DBP10_SCHPO ATP-dependent RNA helicase dbp10 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dbp10 PE=1 SV=1
Length = 848
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 11 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 70
+T++RA+++KGFK PT IQ +P LL +D+VG A TGSGKT AF IP++ + + L
Sbjct: 78 QTLLRAIFKKGFKAPTPIQRKTIP-LLLEGRDVVGMARTGSGKTAAFVIPMIEHLKSTLA 136
Query: 71 N 71
N
Sbjct: 137 N 137
>sp|Q7RZH4|MAK5_NEUCR ATP-dependent RNA helicase mak-5 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mak-5 PE=3 SV=1
Length = 805
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+EWV ++ +I ++ + F PT IQS +P ++A D++G A TGSGKTLAFGIP
Sbjct: 208 MSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPE-IMAGHDVIGKASTGSGKTLAFGIP 266
Query: 61 IL 62
++
Sbjct: 267 VI 268
>sp|Q4PFD9|PRP5_USTMA Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Ustilago
maydis (strain 521 / FGSC 9021) GN=PRP5 PE=3 SV=1
Length = 1156
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ +W +P + + + + G+ PT IQS MP A+++ +DI+G A+TGSGKT+AF +P
Sbjct: 475 LTKWSHCGLPASCLDVIKRLGYSAPTPIQSQAMP-AIMSGRDIIGVAKTGSGKTMAFLLP 533
Query: 61 ILTGIVNKLENPTEEDE 77
+ I K + P E E
Sbjct: 534 MFRHI--KDQRPVEPSE 548
>sp|P42305|DBPA_BACSU ATP-dependent RNA helicase DbpA OS=Bacillus subtilis (strain 168)
GN=dbpA PE=1 SV=2
Length = 479
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
M+ + + I I+RAL G+ PTK+Q V+P+AL RKD+V ++TGSGKT +FGIP
Sbjct: 1 MSHFKNYQISHDILRALEGLGYTEPTKVQQSVIPAAL-ERKDLVVKSQTGSGKTASFGIP 59
Query: 61 IL 62
+
Sbjct: 60 LC 61
>sp|Q757I6|MAK5_ASHGO ATP-dependent RNA helicase MAK5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MAK5
PE=3 SV=1
Length = 752
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
Query: 1 MAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGI 59
+ W + T+++ L + GF PT+IQ +P AL DI+G A TGSGKTLA+GI
Sbjct: 178 LPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGH-DIMGKASTGSGKTLAYGI 236
Query: 60 PILTGIV 66
PIL GI+
Sbjct: 237 PILEGII 243
>sp|Q4WRV2|DRS1_ASPFU ATP-dependent RNA helicase drs1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=drs1
PE=3 SV=1
Length = 830
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F TPT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 315 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 369
>sp|P0CR06|DBP10_CRYNJ ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=DBP10 PE=3 SV=1
Length = 802
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSAL-LARKDIVGAAETGSGKTLAFGIPI 61
+W N+ +IR+L + FKTPT IQ +P AL +DI+G A TGSGKTLA+ IP+
Sbjct: 28 QWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPL 87
Query: 62 L--TGIVNKLENP 72
L TG + + P
Sbjct: 88 LQRTGSTHHGQGP 100
>sp|P0CR07|DBP10_CRYNB ATP-dependent RNA helicase DBP10 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=DBP10 PE=3
SV=1
Length = 802
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 3 EWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSAL-LARKDIVGAAETGSGKTLAFGIPI 61
+W N+ +IR+L + FKTPT IQ +P AL +DI+G A TGSGKTLA+ IP+
Sbjct: 28 QWRALNVGPDLIRSLLIRKFKTPTPIQRAAIPPALSTPPRDILGMARTGSGKTLAYLIPL 87
Query: 62 L--TGIVNKLENP 72
L TG + + P
Sbjct: 88 LQRTGSTHHGQGP 100
>sp|A1D1R8|DRS1_NEOFI ATP-dependent RNA helicase drs1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=drs1
PE=3 SV=1
Length = 819
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F TPT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 304 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 358
>sp|A1CNV8|DRS1_ASPCL ATP-dependent RNA helicase drs1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=drs1 PE=3 SV=1
Length = 826
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F TPT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 311 FNLSRPILRGLASVNFTTPTPIQQKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 365
>sp|P0CQ90|MAK5_CRYNJ ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MAK5 PE=3 SV=1
Length = 772
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW ++ ++ R+ F PT IQS +P+ + R D+VG AETGSGKTLA+ +P
Sbjct: 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYSLP 229
Query: 61 ILTGIVNK 68
IL ++ +
Sbjct: 230 ILHYLLGQ 237
>sp|P0CQ91|MAK5_CRYNB ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MAK5 PE=3 SV=1
Length = 772
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
+ EW ++ ++ R+ F PT IQS +P+ + R D+VG AETGSGKTLA+ +P
Sbjct: 171 LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGVAETGSGKTLAYSLP 229
Query: 61 ILTGIVNK 68
IL ++ +
Sbjct: 230 ILHYLLGQ 237
>sp|Q4PDT1|DBP3_USTMA ATP-dependent RNA helicase DBP3 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=DBP3 PE=3 SV=1
Length = 585
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 13 IIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 68
+ + L +GF TPT IQ+ P LL KD+VG AETGSGKT AFG+P L +V K
Sbjct: 170 VKKTLDSQGFSTPTPIQACCWP-VLLQNKDVVGIAETGSGKTFAFGLPALQHLVTK 224
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 27/85 (31%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD+VG AETGSGKT AFG+P L +V K +VL+ ++++
Sbjct: 197 KDVVGIAETGSGKTFAFGLPALQHLVTK------------------HKVLDSGKKKAKGA 238
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
++ L++APTRELAIQ
Sbjct: 239 ---------QVNVLVIAPTRELAIQ 254
>sp|Q54Y81|DDX23_DICDI ATP-dependent RNA helicase ddx23 OS=Dictyostelium discoideum
GN=helB2 PE=2 SV=1
Length = 834
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + N+P I+ A+ Q G++ P+ IQ +P +L R DI+G AETGSGKT AF IP+L
Sbjct: 415 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGR-DILGIAETGSGKTCAFVIPMLI 473
Query: 64 GIVN--KLENPTEED 76
I +L TE D
Sbjct: 474 YISKQPRLTKDTEAD 488
>sp|P0CQ98|PRP5_CRYNJ Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=PRP5 PE=3 SV=1
Length = 1072
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P+ + + +G++TPT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+L
Sbjct: 405 WGAFGLPQGCLDVIKHQGWETPTSIQAQAIP-AIMSGRDVIGIAKTGSGKTVAFLLPMLR 463
Query: 64 GIVNK 68
+ ++
Sbjct: 464 HVRDQ 468
>sp|P0CQ99|PRP5_CRYNB Pre-mRNA-processing ATP-dependent RNA helicase PRP5 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=PRP5 PE=3 SV=1
Length = 1072
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F +P+ + + +G++TPT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+L
Sbjct: 405 WGAFGLPQGCLDVIKHQGWETPTSIQAQAIP-AIMSGRDVIGIAKTGSGKTVAFLLPMLR 463
Query: 64 GIVNK 68
+ ++
Sbjct: 464 HVRDQ 468
>sp|A5E572|DBP9_LODEL ATP-dependent RNA helicase DBP9 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=DBP9 PE=3 SV=1
Length = 606
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W N+ +++A+ + GF+ PT IQS +P AL ++DI+ A TGSGKT A+ IPI+
Sbjct: 22 WDSLNLDPRLLQAIDKLGFENPTLIQSSAIPLALEEKRDIIAKASTGSGKTAAYAIPIIQ 81
Query: 64 GIV 66
I+
Sbjct: 82 NIM 84
>sp|Q6BLM5|DBP9_DEBHA ATP-dependent RNA helicase DBP9 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DBP9 PE=3 SV=1
Length = 586
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W F + +++A+ Q GF+ PT IQS +P A+ ++DI+ A TGSGKT A+ IPI+
Sbjct: 23 WESFGLDARLLQAIDQLGFENPTLIQSSAIPLAIEEKRDIIAKASTGSGKTAAYSIPIIQ 82
Query: 64 GIV 66
++
Sbjct: 83 NLL 85
>sp|Q62780|DDX46_RAT Probable ATP-dependent RNA helicase DDX46 OS=Rattus norvegicus
GN=Ddx46 PE=1 SV=1
Length = 1032
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>sp|A4REU9|MAK5_MAGO7 ATP-dependent RNA helicase MAK5 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=MAK5 PE=3 SV=2
Length = 760
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++EW + E I+ ++ + F PT IQ+ +P +LA D+VG A TGSGKTLAFGIP
Sbjct: 186 VSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPE-ILAGHDVVGKASTGSGKTLAFGIP 244
Query: 61 IL 62
I+
Sbjct: 245 IV 246
>sp|Q569Z5|DDX46_MOUSE Probable ATP-dependent RNA helicase DDX46 OS=Mus musculus GN=Ddx46
PE=1 SV=2
Length = 1032
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>sp|A3LV40|DBP9_PICST ATP-dependent RNA helicase DBP9 OS=Scheffersomyces stipitis
(strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL
Y-11545) GN=DBP9 PE=3 SV=1
Length = 581
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
+ W F++ +++A+ Q GF+ PT IQ+ +P AL ++DI+ A TGSGKT A+ IPI
Sbjct: 15 SSWDSFHLDARLVQAIDQLGFEHPTLIQASAIPLALEEKRDIIAKASTGSGKTGAYVIPI 74
Query: 62 LTGIV 66
+ ++
Sbjct: 75 IHNLL 79
>sp|Q09903|DRS1_SCHPO ATP-dependent RNA helicase drs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=drs1 PE=3 SV=1
Length = 754
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 2 AEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 61
+ + N+ I++ L GF+ PT+IQ +P ALL KDIVGAA TGSGKT AF +PI
Sbjct: 259 SSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLG-KDIVGAAVTGSGKTAAFIVPI 317
Query: 62 LTGIVNK 68
L ++ +
Sbjct: 318 LERLLYR 324
>sp|Q5R6D8|DDX46_PONAB Probable ATP-dependent RNA helicase DDX46 OS=Pongo abelii GN=DDX46
PE=2 SV=1
Length = 1032
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>sp|Q7L014|DDX46_HUMAN Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46
PE=1 SV=2
Length = 1031
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
WV+ I I+ +L + G++ PT IQ+ +P A+++ +D++G A+TGSGKT+AF +P+
Sbjct: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIP-AIMSGRDLIGIAKTGSGKTIAFLLPMFR 432
Query: 64 GIVNK 68
I+++
Sbjct: 433 HIMDQ 437
>sp|Q1E2B2|DRS1_COCIM ATP-dependent RNA helicase DRS1 OS=Coccidioides immitis (strain RS)
GN=DRS1 PE=3 SV=1
Length = 840
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L GF PT IQ +P LL KD+VG A TGSGKT AF IPIL
Sbjct: 324 FNLSRPILRGLAAVGFSAPTPIQRKAIPVGLLG-KDLVGGAVTGSGKTAAFIIPIL 378
>sp|Q59W52|PRP28_CANAL Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 OS=Candida
albicans (strain SC5314 / ATCC MYA-2876) GN=PRP28 PE=3
SV=1
Length = 581
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W + +I + ++ + Q G++ PT +Q +P AL ++D+VG AETGSGKTLAF IP+L
Sbjct: 170 WNEGSINDKLVSIISQLGYEEPTSVQRASIPLAL-KKRDVVGVAETGSGKTLAFLIPVLN 228
Query: 64 GIVNKLEN 71
I++ EN
Sbjct: 229 YILSIDEN 236
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 43/86 (50%), Gaps = 29/86 (33%)
Query: 82 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 141
++D+VG AETGSGKTLAF IP+L I++ DEN E
Sbjct: 205 KRDVVGVAETGSGKTLAFLIPVLNYILSI-------DENYLKYE---------------- 241
Query: 142 TTEFVKKTRNKLYALILAPTRELAIQ 167
K N+ LILAPTRELA+Q
Sbjct: 242 ------KISNEPVGLILAPTRELALQ 261
>sp|Q2UQI6|DRS1_ASPOR ATP-dependent RNA helicase drs1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=drs1 PE=3 SV=2
Length = 820
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 307 FNLSRPILRGLAAVNFTNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 361
>sp|A5DPU0|MAK5_PICGU ATP-dependent RNA helicase MAK5 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=MAK5 PE=3 SV=1
Length = 754
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 14 IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPT 73
I L GFK PT IQ +P AL KD++G A TGSGKTLA+GIPIL + +LE+ T
Sbjct: 196 INGLAGCGFKEPTAIQRKAIPLALQG-KDVIGKATTGSGKTLAYGIPILERCLAQLESKT 254
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 39/85 (45%), Gaps = 32/85 (37%)
Query: 83 KDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANT 142
KD++G A TGSGKTLA+GIPIL E L +LE ++
Sbjct: 222 KDVIGKATTGSGKTLAYGIPIL------------------------ERCLAQLESKT--- 254
Query: 143 TEFVKKTRNKLYALILAPTRELAIQ 167
T A+I APTRELA Q
Sbjct: 255 -----NTIKPPTAMIFAPTRELAHQ 274
>sp|Q1E7Y4|MAK5_COCIM ATP-dependent RNA helicase MAK5 OS=Coccidioides immitis (strain RS)
GN=MAK5 PE=3 SV=1
Length = 783
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 1 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 60
++ W ++ + +L + F +PT IQS +P A+L D++G A TGSGKTLAFGIP
Sbjct: 189 VSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIP-AVLQGHDVIGKASTGSGKTLAFGIP 247
Query: 61 ILTGIVNKLEN---PTEEDENDSAR 82
I+ + K PT +E +S +
Sbjct: 248 IVEYFLGKYRGGRAPTASEERESTK 272
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 40/87 (45%), Gaps = 30/87 (34%)
Query: 84 DIVGAAETGSGKTLAFGIPILTGIVNKLEN---PTEEDENDSGLEEEAEEVLEELEEESA 140
D++G A TGSGKTLAFGIPI+ + K PT +E +S E
Sbjct: 229 DVIGKASTGSGKTLAFGIPIVEYFLGKYRGGRAPTASEERESTKEP-------------- 274
Query: 141 NTTEFVKKTRNKLYALILAPTRELAIQ 167
ALIL+PTRELA Q
Sbjct: 275 -------------MALILSPTRELAHQ 288
>sp|Q0CZN5|DRS1_ASPTN ATP-dependent RNA helicase drs1 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=drs1 PE=3 SV=1
Length = 821
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 309 FNLSRPILRGLAAVNFTNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 363
>sp|A2QAX7|DRS1_ASPNC ATP-dependent RNA helicase drs1 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=drs1 PE=3 SV=1
Length = 824
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPIL 62
FN+ I+R L F PT IQ +P ALL KDIVG+A TGSGKT AF +PIL
Sbjct: 314 FNLSRPILRGLAGVNFSNPTPIQRKTIPVALLG-KDIVGSAVTGSGKTAAFVVPIL 368
>sp|Q6FUA6|DBP9_CANGA ATP-dependent RNA helicase DBP9 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=DBP9 PE=3 SV=1
Length = 595
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 7 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 66
F + +++A+ GF PT IQS +P AL ++DI+ A TGSGKTLA+ IP++ I+
Sbjct: 19 FKLDARLLQAIKGSGFTHPTLIQSHAIPLALEEKRDIIAKAATGSGKTLAYLIPVIQTIL 78
Query: 67 NKLENPTEEDE 77
+ ++ T DE
Sbjct: 79 DYKKSRTNGDE 89
>sp|Q9BUQ8|DDX23_HUMAN Probable ATP-dependent RNA helicase DDX23 OS=Homo sapiens GN=DDX23
PE=1 SV=3
Length = 820
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
>sp|Q5RC67|DDX23_PONAB Probable ATP-dependent RNA helicase DDX23 OS=Pongo abelii GN=DDX23
PE=2 SV=1
Length = 820
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 4 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 63
W ++P I+ + + G+K PT IQ +P L R DI+G AETGSGKT AF IP+L
Sbjct: 393 WKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNR-DIIGVAETGSGKTAAFLIPLLV 451
Query: 64 GIVN--KLENPTEEDENDSARKDIVGA-----AETGSGKTLAFGIPI 103
I K++ E D+ A I+ A A+ +T+ FG P+
Sbjct: 452 WITTLPKIDRIEESDQGPYA---IILAPTRELAQQIEEETIKFGKPL 495
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.130 0.347
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,654,304
Number of Sequences: 539616
Number of extensions: 2829383
Number of successful extensions: 24324
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 19190
Number of HSP's gapped (non-prelim): 4612
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 57 (26.6 bits)