BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy1195
MLSWFLIIRSSPEPERTYLSGLPDSEWLALVLIDSPRYLDNSGYDSGIFTYLEEEEEEEE
EDDKEEERVEREEEEEEEDDEEEERFEREEEEERRKVTTYSENRQKTVEICPEAVKIPPS
AATILTKWPDDIQNFLILFLSKLDVQFVWVPSHVGIAGNEEADRLAKEALTSAHPSVNQI
PIPNYKTYSKKKILASWNSEWHNVQNNKLREIKPDNKPWSPPI

High Scoring Gene Products

Symbol, full name Information P value
H0YFU0
Uncharacterized protein 		protein from Homo sapiens 0.00037

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy1195
        (223 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|H0YFU0 - symbol:H0YFU0 "Uncharacterized protein...    90  0.00037   1


>UNIPROTKB|H0YFU0 [details] [associations]
            symbol:H0YFU0 "Uncharacterized protein" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004523 "ribonuclease H activity" evidence=IEA]
            InterPro:IPR002156 InterPro:IPR012337 Pfam:PF00075 PROSITE:PS50879
            GO:GO:0003676 SUPFAM:SSF53098 GO:GO:0004523 EMBL:AC108488
            Ensembl:ENST00000438485 Bgee:H0YFU0 Uniprot:H0YFU0
        Length = 34

 Score = 90 (36.7 bits), Expect = 0.00037, P = 0.00037
 Identities = 16/26 (61%), Positives = 21/26 (80%)

Query:   143 LDVQFVWVPSHVGIAGNEEADRLAKE 168
             +D+Q++ VP H G  GNEEADRLA+E
Sbjct:     5 MDIQWMHVPGHSGFIGNEEADRLARE 30


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      223       180   0.00092  109 3  11 22  0.47    32
                                                     31  0.39    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  184 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  17.47u 0.10s 17.57t   Elapsed:  00:00:01
  Total cpu time:  17.47u 0.10s 17.57t   Elapsed:  00:00:01
  Start:  Thu Aug 15 15:06:30 2013   End:  Thu Aug 15 15:06:31 2013

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