Query psy11954
Match_columns 881
No_of_seqs 558 out of 3276
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 23:13:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11954.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11954hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gsx_A Complement receptor typ 100.0 7.3E-70 2.5E-74 679.8 50.3 536 278-871 1-647 (951)
2 2gsx_A Complement receptor typ 100.0 8.5E-69 2.9E-73 670.2 50.8 539 278-872 132-837 (951)
3 1haq_A Complement factor H; im 100.0 7.1E-67 2.4E-71 664.0 46.2 475 277-872 548-1155(1213)
4 1haq_A Complement factor H; im 100.0 6.1E-66 2.1E-70 655.4 48.0 523 278-871 489-1096(1213)
5 2q7z_A Complement receptor typ 100.0 1.1E-64 3.7E-69 668.5 46.1 479 277-868 510-1099(1931)
6 2q7z_A Complement receptor typ 100.0 3.6E-64 1.2E-68 663.5 46.5 490 255-866 47-647 (1931)
7 1ntj_A Complement receptor rel 100.0 1.5E-48 5.2E-53 428.1 27.8 290 466-862 3-320 (320)
8 2c8i_E CD55, complement decay- 100.0 3.8E-48 1.3E-52 424.1 28.4 294 467-863 2-316 (316)
9 2c8i_E CD55, complement decay- 100.0 1.5E-47 5.1E-52 419.4 28.8 300 278-722 1-316 (316)
10 1ntj_A Complement receptor rel 100.0 3.2E-47 1.1E-51 417.5 30.3 295 278-721 3-320 (320)
11 1qub_A Protein (human BETA2-gl 100.0 3.9E-47 1.3E-51 415.7 24.5 289 466-866 2-311 (319)
12 1qub_A Protein (human BETA2-gl 100.0 2.1E-46 7.3E-51 409.9 28.5 294 365-806 2-311 (319)
13 1ntl_A CRRY-IG; immunology, co 100.0 5E-46 1.7E-50 439.0 28.8 294 467-866 2-321 (551)
14 1ntl_A CRRY-IG; immunology, co 100.0 6E-45 2E-49 429.8 30.0 298 279-723 2-319 (551)
15 3o8e_B Membrane cofactor prote 100.0 4.4E-41 1.5E-45 355.7 25.0 217 620-864 17-252 (252)
16 3o8e_B Membrane cofactor prote 100.0 8E-41 2.7E-45 353.8 25.0 239 367-723 1-252 (252)
17 2wii_C H factor 1, complement 100.0 2.6E-40 9E-45 354.2 21.7 245 465-816 5-264 (277)
18 1ok3_A CD55, CR, DAF, compleme 100.0 3E-40 1E-44 349.8 21.1 241 365-722 2-253 (254)
19 2wii_C H factor 1, complement 100.0 1.1E-39 3.7E-44 349.5 21.9 241 365-723 6-252 (277)
20 1ok3_A CD55, CR, DAF, compleme 100.0 1.1E-39 3.8E-44 345.4 21.3 215 621-863 21-253 (254)
21 3iyp_F Complement decay-accele 100.0 5E-39 1.7E-43 357.3 23.7 231 621-879 53-303 (381)
22 3iyp_F Complement decay-accele 100.0 8.9E-39 3.1E-43 355.3 23.9 242 365-723 34-286 (381)
23 2xrb_A Complement regulatory p 100.0 6.6E-39 2.3E-43 345.5 21.2 238 365-722 36-290 (290)
24 2xrb_A Complement regulatory p 100.0 1.3E-38 4.5E-43 343.2 21.0 213 621-863 56-290 (290)
25 1rid_A Complement control prot 100.0 2.7E-39 9.3E-44 340.0 12.3 209 621-863 23-244 (244)
26 1rid_A Complement control prot 100.0 6.4E-39 2.2E-43 337.1 14.3 226 467-802 1-243 (244)
27 2j22_A Fucolectin-related prot 100.0 1.3E-35 4.6E-40 284.9 10.4 142 14-191 7-148 (148)
28 2j1v_A Fucolectin-related prot 100.0 2.9E-34 1E-38 277.1 11.3 139 16-190 12-150 (151)
29 1k12_A Lectin; beta barrel, pr 100.0 5.9E-34 2E-38 277.8 11.1 143 18-191 7-154 (158)
30 4gwi_A Lectinolysin, platelet 100.0 3E-33 1E-37 270.0 10.7 141 16-191 6-147 (153)
31 3erb_A Complement C2; C3/C5 co 100.0 1.6E-31 5.5E-36 276.9 17.7 172 622-821 20-205 (223)
32 3erb_A Complement C2; C3/C5 co 100.0 1.3E-30 4.3E-35 270.2 19.4 191 278-558 2-202 (223)
33 3lei_A Platelet aggregation fa 100.0 1.5E-30 5E-35 252.8 11.6 139 18-191 8-147 (153)
34 3cqo_A FBP32; F-lectin, fucole 100.0 3.7E-29 1.3E-33 270.2 10.7 160 18-207 2-167 (293)
35 3sw0_X H factor 1, complement 100.0 3.1E-28 1.1E-32 245.5 13.7 174 465-722 2-187 (188)
36 2uwn_A H factor 1, human compl 99.9 2.7E-28 9.2E-33 245.4 8.9 170 466-721 4-187 (187)
37 2uwn_A H factor 1, human compl 99.9 4.3E-28 1.5E-32 243.9 9.3 166 662-862 3-187 (187)
38 3sw0_X H factor 1, complement 99.9 2.3E-27 8E-32 239.0 13.7 169 662-863 2-187 (188)
39 3hrz_D Complement factor B; se 99.9 8.7E-27 3E-31 285.1 13.7 169 622-817 26-210 (741)
40 3hrz_D Complement factor B; se 99.9 2.3E-26 7.9E-31 281.4 17.2 175 658-865 5-197 (741)
41 3cqo_A FBP32; F-lectin, fucole 99.9 1.1E-26 3.7E-31 250.9 7.6 141 19-191 151-291 (293)
42 3t5o_A Complement component C6 99.9 3.1E-24 1E-28 264.3 11.3 200 627-862 584-796 (913)
43 3t5o_A Complement component C6 99.9 8.1E-24 2.8E-28 260.5 13.8 225 466-806 566-802 (913)
44 3gov_A MAsp-1; complement, ser 99.9 1.9E-22 6.6E-27 196.4 14.2 134 465-674 5-152 (155)
45 3gov_A MAsp-1; complement, ser 99.9 4.1E-22 1.4E-26 194.1 13.6 133 365-555 6-152 (155)
46 2qy0_A Complement C1R subcompo 99.9 8.2E-22 2.8E-26 192.6 14.4 134 466-675 3-157 (159)
47 1gkn_A Complement receptor typ 99.9 8.3E-22 2.9E-26 185.1 12.7 101 621-723 24-127 (128)
48 2qy0_A Complement C1R subcompo 99.9 1.3E-21 4.6E-26 191.1 14.0 130 278-437 3-157 (159)
49 1ly2_A CD21, complement recept 99.9 1.3E-21 4.6E-26 184.5 12.8 102 621-723 20-130 (130)
50 1gkn_A Complement receptor typ 99.9 8.8E-22 3E-26 185.0 11.0 120 465-663 3-127 (128)
51 1ly2_A CD21, complement recept 99.9 1.1E-21 3.8E-26 185.1 10.6 125 465-663 1-130 (130)
52 1gkg_A Complement receptor typ 99.9 1.3E-21 4.5E-26 185.9 10.9 100 622-721 23-136 (136)
53 1h03_P Complement decay-accele 99.9 1.2E-21 4.2E-26 183.4 10.3 101 622-722 19-125 (125)
54 1h03_P Complement decay-accele 99.8 2E-21 6.9E-26 181.9 10.8 118 278-424 1-125 (125)
55 1gkg_A Complement receptor typ 99.8 4.2E-21 1.4E-25 182.4 11.4 120 275-423 2-136 (136)
56 2aty_A Complement receptor chi 99.8 1.6E-20 5.6E-25 210.5 14.6 168 466-712 2-195 (376)
57 2a55_A C4B-binding protein; co 99.8 2.2E-21 7.5E-26 183.2 5.1 101 621-723 22-126 (133)
58 2aty_A Complement receptor chi 99.8 7.3E-20 2.5E-24 205.2 17.7 102 621-723 20-130 (376)
59 2a55_A C4B-binding protein; co 99.8 3.6E-21 1.2E-25 181.7 4.4 119 466-663 1-126 (133)
60 4a42_A GH89_CBM32-4, alpha-N-a 99.8 2.4E-19 8.3E-24 172.6 11.2 128 16-189 20-148 (149)
61 4a3z_A GH89_CBM32, alpha-N-ace 99.8 1.8E-19 6.3E-24 174.9 8.8 130 18-189 25-161 (161)
62 3r62_A H factor 1, complement 99.7 1.2E-18 4.2E-23 163.8 8.3 96 621-722 24-128 (129)
63 3r62_A H factor 1, complement 99.7 8E-19 2.7E-23 165.1 6.8 119 465-662 4-128 (129)
64 2yby_A Complement factor H; im 99.7 1.4E-18 4.8E-23 162.0 5.7 92 624-721 28-123 (124)
65 2yby_A Complement factor H; im 99.7 2.4E-18 8E-23 160.4 5.0 110 278-423 3-123 (124)
66 4ayi_A H factor 1, complement 99.7 4.7E-18 1.6E-22 158.5 5.5 94 622-721 28-125 (125)
67 1zjk_A Mannan-binding lectin s 99.7 1E-16 3.4E-21 181.2 15.0 103 621-723 33-150 (403)
68 4ayi_A H factor 1, complement 99.7 1.2E-17 4.1E-22 155.7 5.9 95 760-862 29-125 (125)
69 1zjk_A Mannan-binding lectin s 99.6 8E-16 2.7E-20 173.8 13.6 130 465-670 14-156 (403)
70 2ehf_A CUB and sushi domain-co 99.6 1.8E-15 6.2E-20 126.6 8.3 71 794-866 2-72 (73)
71 2b5i_D Interleukin-2 receptor 99.5 8.5E-15 2.9E-19 144.7 9.3 154 664-865 2-167 (217)
72 2ehf_A CUB and sushi domain-co 99.5 2E-14 6.9E-19 120.2 7.8 69 653-723 2-70 (73)
73 2yra_A Seizure 6-like protein 99.5 2.9E-14 1E-18 119.6 7.6 71 801-871 3-73 (74)
74 2b5i_D Interleukin-2 receptor 99.5 6.7E-14 2.3E-18 138.3 8.9 143 279-424 2-165 (217)
75 2j1a_A Hyaluronidase, CBM32; p 99.5 7.9E-14 2.7E-18 134.3 9.0 131 23-189 9-150 (150)
76 1gpz_A Complement C1R componen 99.5 2E-13 7E-18 153.9 13.6 103 621-723 20-144 (399)
77 4a4a_A Alpha-N-acetylglucosami 99.4 1.1E-13 3.9E-18 164.9 10.1 130 16-191 21-154 (914)
78 3ggl_A Putative chitobiase; X- 99.4 4.5E-13 1.5E-17 131.9 11.8 124 37-196 38-164 (169)
79 1gpz_A Complement C1R componen 99.4 5.3E-13 1.8E-17 150.5 14.0 128 466-669 1-149 (399)
80 2yra_A Seizure 6-like protein 99.4 2.8E-13 9.7E-18 113.5 7.4 64 660-723 3-66 (74)
81 3f2z_A Uncharacterized protein 99.4 1.1E-12 3.9E-17 127.7 11.8 124 37-196 28-154 (159)
82 1srz_A Gamma-aminobutyric acid 99.4 4.1E-13 1.4E-17 110.4 5.2 64 799-864 2-68 (68)
83 3tvj_A Mannan-binding lectin s 99.4 1.6E-12 5.5E-17 112.2 9.1 71 800-871 2-81 (86)
84 2jda_A Yecbm32; hypothetical p 99.4 1.4E-12 4.7E-17 124.9 9.1 126 23-191 8-137 (145)
85 4a41_A GH89_CBM32-5, alpha-N-a 99.3 1.3E-12 4.6E-17 127.3 8.9 128 25-189 29-161 (161)
86 2v72_A CBM32, EXO-alpha-sialid 99.3 8.2E-13 2.8E-17 126.1 7.2 125 28-189 18-143 (143)
87 3eyp_A Putative alpha-L-fucosi 99.3 2.9E-12 1E-16 144.7 9.5 138 18-195 323-461 (469)
88 1srz_A Gamma-aminobutyric acid 99.3 3.1E-12 1.1E-16 105.1 4.9 64 658-723 2-68 (68)
89 3tvj_A Mannan-binding lectin s 99.2 1.3E-11 4.5E-16 106.5 8.2 65 659-723 2-75 (86)
90 1g1s_A P-selectin; selectin, l 99.1 1.5E-10 5E-15 113.0 9.9 98 203-312 46-149 (162)
91 2py2_A Antifreeze protein type 99.1 3.7E-11 1.3E-15 113.6 4.8 70 204-277 60-129 (136)
92 1h8u_A MBP, eosinophil granule 99.1 7.4E-11 2.5E-15 108.3 6.5 69 203-275 49-117 (117)
93 2msb_A Mannose-binding protein 99.1 8.1E-11 2.8E-15 107.7 6.3 67 204-275 47-113 (115)
94 1rdl_1 SUB-MBP-C, mannose-bind 99.1 1.3E-10 4.3E-15 106.1 6.6 68 203-275 44-111 (113)
95 4aqb_A Mannan-binding lectin s 99.1 3.8E-10 1.3E-14 125.2 11.7 148 387-557 201-359 (361)
96 2zib_A Type II antifreeze prot 99.1 1.3E-10 4.3E-15 109.5 6.4 69 204-276 63-131 (133)
97 3alu_A Lectin CEL-IV, C-type; 99.1 6.6E-11 2.3E-15 114.9 4.5 70 204-276 81-150 (157)
98 2v5d_A O-GLCNACASE NAGJ; famil 99.1 4E-10 1.4E-14 135.2 11.7 129 25-189 598-737 (737)
99 3bn6_A Lactadherin; anticoagul 99.1 1.7E-10 5.8E-15 111.9 7.0 134 25-189 14-157 (158)
100 3kqg_A Langerin, C-type lectin 99.0 2E-10 7E-15 114.3 7.4 73 203-278 102-178 (182)
101 1byf_A TC14, protein (polyandr 99.0 1.9E-10 6.3E-15 107.0 6.2 69 203-276 50-122 (125)
102 1w8o_A Bacterial sialidase; 3D 99.0 4.5E-10 1.5E-14 133.6 11.1 126 30-190 468-600 (601)
103 1g1t_A E-selectin; EGF, adhesi 99.0 5.6E-10 1.9E-14 108.2 9.7 98 203-312 46-149 (157)
104 3cfw_A L-selectin; EGF, cell a 99.0 5.5E-10 1.9E-14 109.2 9.2 73 203-282 46-124 (164)
105 1tdq_B Aggrecan core protein; 99.0 2.2E-10 7.5E-15 107.2 6.0 69 204-275 60-129 (130)
106 1egg_A Macrophage mannose rece 99.0 1.6E-10 5.3E-15 110.7 4.9 72 203-277 69-140 (147)
107 1rtm_1 Mannose-binding protein 99.0 2.3E-10 7.8E-15 110.0 5.7 67 204-275 81-147 (149)
108 1jzn_A Galactose-specific lect 99.0 1.9E-10 6.5E-15 108.3 4.9 70 203-275 63-133 (135)
109 2h2t_B Low affinity immunoglob 99.0 3E-10 1E-14 112.3 6.3 76 203-284 70-146 (175)
110 1wk1_A Hypothetical protein YK 99.0 7.2E-10 2.5E-14 106.6 8.7 69 204-277 53-131 (150)
111 1wmz_A Lectin CEL-I, N-acetyl- 99.0 2.5E-10 8.4E-15 108.4 5.1 70 203-275 68-137 (140)
112 2ox9_A Collectin placenta 1; C 99.0 3E-10 1E-14 107.8 5.6 74 203-281 59-136 (140)
113 1buu_A Protein (mannose-bindin 99.0 2.6E-10 8.9E-15 111.9 5.1 67 204-275 100-166 (168)
114 1hup_A Mannose-binding protein 99.0 2.9E-10 9.8E-15 108.2 5.2 67 204-275 73-139 (141)
115 1tn3_A Tetranectin; plasminoge 99.0 3.6E-10 1.2E-14 106.7 5.1 70 203-276 63-135 (137)
116 1qdd_A Lithostathine; pancreat 99.0 5E-10 1.7E-14 106.7 5.8 69 203-275 73-142 (144)
117 3ues_A Alpha-1,3/4-fucosidase; 98.9 6.1E-10 2.1E-14 125.6 7.2 126 18-188 350-476 (478)
118 1k3i_A Galactose oxidase precu 98.9 1.3E-09 4.4E-14 131.0 10.5 137 21-191 25-166 (656)
119 3c22_A C-type lectin domain fa 98.9 3.5E-10 1.2E-14 109.6 4.4 74 203-279 76-153 (156)
120 1gz2_A Ovocleidin-17, OC-17 ov 98.9 3.9E-10 1.3E-14 107.1 4.3 68 203-275 72-140 (142)
121 1htn_A Tetranectin; plasminoge 98.9 6.6E-10 2.3E-14 110.6 5.6 69 203-275 108-179 (182)
122 3pbf_A Pulmonary surfactant-as 98.9 1.1E-09 3.7E-14 105.0 6.8 66 204-275 83-148 (148)
123 4aqb_A Mannan-binding lectin s 98.9 7.3E-09 2.5E-13 114.8 14.4 73 800-872 276-354 (361)
124 2kv3_A Regenerating islet-deri 98.9 4.8E-10 1.6E-14 105.0 3.9 68 203-276 62-130 (131)
125 2afp_A Protein (SEA raven type 98.9 2.9E-10 9.8E-15 106.2 2.1 70 202-275 58-127 (129)
126 1uv0_A Pancreatitis-associated 98.9 8.3E-10 2.8E-14 105.9 5.0 69 203-275 73-147 (149)
127 2b6b_D CD209 antigen; cryo EM 98.9 2.3E-09 7.9E-14 105.8 8.0 75 202-283 81-158 (175)
128 1dv8_A Asialoglycoprotein rece 98.9 1.5E-09 5E-14 101.2 6.1 66 203-275 54-126 (128)
129 1pwb_A SP-D, PSP-D, pulmonary 98.9 4.8E-10 1.6E-14 111.1 2.7 68 203-275 110-177 (177)
130 1ypq_A Oxidised low density li 98.9 1E-09 3.6E-14 103.3 4.9 68 203-276 64-132 (135)
131 1sl6_A C-type lectin DC-signr; 98.8 1.9E-09 6.4E-14 107.5 5.7 73 203-283 108-183 (184)
132 1c3a_A Flavocetin-A: alpha sub 98.8 1.9E-09 6.4E-14 101.5 4.6 66 205-280 67-135 (135)
133 2xr6_A CD209 antigen; sugar bi 98.8 2.2E-09 7.4E-14 105.6 5.0 74 203-283 77-153 (170)
134 4deq_A Neuropilin-1, vascular 98.8 3.4E-09 1.2E-13 107.4 6.4 133 26-191 20-156 (218)
135 2c6u_A CLEC1B protein; lectin, 98.8 1E-09 3.6E-14 101.4 2.4 65 204-276 56-120 (122)
136 1ukm_A EMS16 A chain, EMS16 su 98.8 1.5E-09 5.1E-14 102.0 3.5 65 205-276 67-132 (134)
137 2ls8_A C-type lectin domain fa 98.3 5.2E-10 1.8E-14 108.4 0.0 74 204-281 58-134 (156)
138 3bx4_A Aggretin alpha chain; t 98.8 1.8E-09 6.2E-14 101.8 3.8 64 204-276 68-134 (136)
139 1hq8_A NKG2-D; homodimer, CIS- 98.8 3.4E-09 1.1E-13 98.1 5.1 64 204-276 58-121 (123)
140 2bpd_A Dectin-1; receptor, bet 98.8 3.6E-09 1.2E-13 100.6 5.1 67 203-275 73-140 (142)
141 1fvu_A Botrocetin alpha chain; 98.8 2.9E-09 1E-13 99.8 4.3 65 203-276 64-131 (133)
142 2wuh_A Discoidin domain recept 98.8 1.6E-08 5.4E-13 99.6 9.6 135 25-191 31-174 (178)
143 3vpp_A C-type lectin domain fa 98.8 6.5E-09 2.2E-13 97.4 6.5 68 202-277 60-127 (132)
144 2qqi_A Neuropilin-1; VEGF rece 98.7 6E-09 2E-13 113.2 6.2 136 23-191 18-157 (318)
145 1mpu_A NKG2-D type II integral 98.7 5.9E-09 2E-13 98.6 5.4 64 204-276 73-136 (138)
146 1fvu_B Botrocetin beta chain; 98.7 4.5E-09 1.5E-13 97.4 4.4 63 203-275 61-123 (125)
147 2qqi_A Neuropilin-1; VEGF rece 98.7 4.1E-08 1.4E-12 106.5 12.6 142 21-191 172-316 (318)
148 1umr_A Convulxin alpha, CVX al 98.7 2.5E-09 8.6E-14 100.6 2.4 66 205-280 67-135 (135)
149 1czt_A Protein (coagulation fa 98.7 1.2E-08 4.2E-13 98.9 6.9 135 25-190 15-157 (160)
150 2e3x_B Coagulation factor X-ac 98.7 2.8E-09 9.7E-14 100.1 2.2 66 205-280 66-134 (134)
151 2vuv_A Codakine; sugar-binding 98.7 6.5E-09 2.2E-13 97.0 4.5 65 204-276 60-127 (129)
152 2e3x_C Coagulation factor X-ac 98.7 1.3E-08 4.4E-13 93.9 6.3 61 203-275 62-122 (122)
153 1oz7_A Echicetin A-chain; plat 98.7 8E-09 2.7E-13 96.5 4.8 66 203-276 62-128 (131)
154 1j34_A Coagulation factor IX-b 98.7 4.3E-09 1.5E-13 98.1 2.9 62 205-275 65-129 (129)
155 2vm9_A Discoidin-2, discoidin 98.7 1.9E-08 6.5E-13 105.2 8.1 134 25-191 15-155 (257)
156 1sb2_A Rhodocetin alpha subuni 98.7 9.9E-09 3.4E-13 96.1 5.4 65 203-276 63-130 (133)
157 2yc2_A IFT25, intraflagellar t 98.7 4.1E-08 1.4E-12 92.6 9.5 130 19-191 5-139 (139)
158 3hny_M Coagulation factor VIII 98.7 1.1E-08 3.9E-13 98.9 5.6 131 27-190 20-157 (159)
159 1ukm_B EMS16 B chain, EMS16 su 98.7 1.1E-08 3.8E-13 95.1 5.3 63 203-276 60-123 (128)
160 3bdw_A Natural killer cells an 98.7 9.5E-09 3.3E-13 95.0 4.5 66 203-276 56-121 (123)
161 1oz7_B Echicetin B-chain; plat 98.7 1.3E-08 4.4E-13 94.0 5.2 61 203-275 61-121 (123)
162 1jwi_B Platelet aggregation in 98.7 1.8E-08 6.1E-13 93.4 5.9 61 203-275 63-123 (125)
163 1umr_C Convulxin beta, CVX bet 98.7 1.1E-08 3.7E-13 94.8 4.2 61 203-275 63-123 (125)
164 1j34_B Coagulation factor IX-b 98.7 1.1E-08 3.9E-13 94.4 4.3 61 203-275 61-121 (123)
165 3gpr_C Rhodocetin subunit gamm 98.7 5.8E-09 2E-13 98.0 2.2 64 204-276 65-131 (134)
166 3ubu_A Agglucetin subunit alph 98.6 9.3E-09 3.2E-13 96.0 3.4 66 204-276 64-130 (131)
167 3g8k_A Lectin-related NK cell 98.6 1.7E-08 5.9E-13 94.2 5.2 69 203-280 60-128 (130)
168 2qqj_A Neuropilin-2; VEGF rece 98.6 2.3E-08 7.9E-13 108.9 6.7 134 25-191 20-158 (325)
169 2yfu_A Carbohydrate binding fa 98.6 1.2E-07 4E-12 90.3 10.6 115 38-191 24-140 (155)
170 3bx4_B Aggretin beta chain; to 98.6 1.4E-08 4.9E-13 96.9 4.3 61 203-275 84-144 (146)
171 2zxq_A Endo-alpha-N-acetylgala 98.6 3.5E-09 1.2E-13 128.2 0.0 133 25-191 1226-1375(1376)
172 1c3a_B Flavocetin-A: beta subu 98.6 1.6E-08 5.6E-13 93.6 4.2 61 203-275 63-123 (125)
173 3ubu_B Agglucetin subunit beta 98.6 3.7E-08 1.2E-12 91.3 6.3 61 204-275 64-124 (126)
174 1sb2_B Rhodocetin beta subunit 98.6 1.6E-08 5.6E-13 94.2 3.2 61 203-276 65-126 (129)
175 2qqm_A Neuropilin-1; VEGF rece 98.6 1.4E-07 4.7E-12 107.6 11.1 137 21-191 304-448 (450)
176 1jwi_A Bitiscetin; domain swap 98.6 2.1E-08 7.2E-13 93.6 3.4 61 205-276 65-128 (131)
177 1tvg_A LOC51668 protein; cell 98.6 2.1E-07 7.3E-12 88.7 10.2 130 19-191 13-147 (153)
178 3hnm_A Putative chitobiase; PS 98.6 1.9E-07 6.5E-12 91.1 9.8 118 38-191 40-166 (172)
179 3ff7_C Killer cell lectin-like 98.5 6.1E-08 2.1E-12 87.9 5.7 59 203-275 54-112 (112)
180 2w1s_A Hyaluronoglucosaminidas 98.5 2.7E-07 9.2E-12 92.0 9.8 134 19-187 18-160 (192)
181 3bdw_B NKG2-A/NKG2-B type II i 98.5 1.3E-07 4.5E-12 86.8 5.9 61 204-275 59-119 (120)
182 3rs1_A C-type lectin domain fa 98.5 1.4E-07 4.6E-12 87.0 5.9 60 203-275 61-120 (122)
183 2qqj_A Neuropilin-2; VEGF rece 98.4 5.4E-07 1.8E-11 98.0 10.7 138 24-190 176-322 (325)
184 3gpr_D Rhodocetin subunit delt 98.4 3.7E-08 1.3E-12 91.1 1.1 61 204-275 61-122 (124)
185 2yhf_A C-type lectin domain fa 98.4 8.9E-08 3E-12 87.7 3.6 62 203-275 55-116 (118)
186 3gdb_A Endo-D, putative unchar 98.4 3.2E-08 1.1E-12 116.7 0.0 83 14-103 794-888 (937)
187 3ff9_A Killer cell lectin-like 98.4 3.1E-07 1.1E-11 83.6 6.3 59 203-276 55-113 (115)
188 3c8j_A Natural killer cell rec 98.4 1E-07 3.5E-12 96.3 2.6 66 203-277 133-198 (203)
189 3hup_A Early activation antige 98.3 4.4E-07 1.5E-11 84.6 6.1 59 203-275 69-127 (130)
190 3g8l_A Lectin-related NK cell 98.3 3.2E-07 1.1E-11 91.7 4.9 66 203-277 120-185 (190)
191 3m9z_A Killer cell lectin-like 98.3 1.8E-07 6.2E-12 88.3 1.6 66 203-277 61-126 (139)
192 2qqo_A Neuropilin-2; VEGF rece 98.2 3E-06 1E-10 96.8 10.5 134 24-191 305-452 (460)
193 2qqk_A Neuropilin-2; VEGF rece 98.2 2.7E-06 9.4E-11 100.1 10.5 139 24-191 424-571 (579)
194 2qqm_A Neuropilin-1; VEGF rece 98.2 1.1E-06 3.6E-11 100.3 6.5 132 27-191 154-289 (450)
195 1fm5_A Early activation antige 98.1 1.5E-06 5.2E-11 87.4 5.3 60 203-276 138-197 (199)
196 2qqk_A Neuropilin-2; VEGF rece 98.1 3.6E-06 1.2E-10 99.1 7.0 132 27-191 270-406 (579)
197 2qqo_A Neuropilin-2; VEGF rece 98.0 4.3E-06 1.5E-10 95.5 7.0 131 28-191 152-287 (460)
198 4ag4_A Epithelial discoidin do 98.0 1.2E-05 4.2E-10 86.7 9.7 134 28-191 22-161 (351)
199 4gz9_A Neuropilin-1, A5 protei 98.0 5.4E-06 1.8E-10 97.2 7.4 131 28-191 273-407 (577)
200 1sdd_B Coagulation factor V; c 98.0 5.9E-06 2E-10 98.5 7.8 137 25-191 343-485 (647)
201 2r7e_B Coagulation factor VIII 98.0 1.3E-05 4.6E-10 96.3 10.9 134 25-191 625-765 (770)
202 1sdd_B Coagulation factor V; c 97.9 5.8E-06 2E-10 98.5 6.2 138 22-190 499-644 (647)
203 4gz9_A Neuropilin-1, A5 protei 97.9 1.9E-05 6.4E-10 92.6 10.0 131 25-191 426-566 (577)
204 2r7e_B Coagulation factor VIII 97.9 9.7E-06 3.3E-10 97.5 6.8 134 25-191 472-608 (770)
205 2wn3_A Discoidin-1 subunit A; 97.9 3E-05 1E-09 80.6 9.3 132 25-191 15-154 (254)
206 2psm_F Interleukin-15 receptor 97.8 1.7E-05 6E-10 64.3 4.8 60 803-864 8-74 (78)
207 2psm_F Interleukin-15 receptor 97.7 4.4E-05 1.5E-09 62.0 4.8 60 662-723 8-74 (78)
208 1elv_A Complement C1S componen 97.4 0.00023 7.7E-09 77.6 7.4 62 804-866 2-71 (333)
209 1elv_A Complement C1S componen 97.2 0.00038 1.3E-08 75.8 6.8 60 663-723 2-69 (333)
210 2cho_A Glucosaminidase, hexosa 97.0 0.00015 5E-09 86.0 1.0 110 37-190 603-714 (716)
211 2z3q_B Interleukin-15 receptor 96.8 0.00099 3.4E-08 56.7 4.3 58 803-862 5-69 (107)
212 2z3q_B Interleukin-15 receptor 96.7 0.0012 4.1E-08 56.2 4.3 58 365-424 6-70 (107)
213 4f4o_C Haptoglobin; globin fol 96.2 0.006 2E-07 66.5 6.9 55 803-866 30-91 (347)
214 4f4o_C Haptoglobin; globin fol 95.8 0.0096 3.3E-07 64.9 6.5 52 663-723 31-89 (347)
215 1jhj_A APC10; beta sandwich, j 95.4 0.018 6.3E-07 55.1 5.7 123 28-191 30-161 (171)
216 4aqt_A Laminin subunit gamma-1 95.1 0.099 3.4E-06 57.0 11.3 65 20-85 24-122 (375)
217 1md8_A C1R complement serine p 95.0 0.059 2E-06 58.1 9.1 62 805-866 1-78 (329)
218 1md8_A C1R complement serine p 94.3 0.076 2.6E-06 57.2 7.9 60 664-723 1-76 (329)
219 4aqs_A Laminin subunit beta-1; 89.5 3.6 0.00012 47.1 14.7 33 67-105 106-138 (525)
220 3gza_A Putative alpha-L-fucosi 89.3 0.43 1.5E-05 53.0 6.3 88 63-189 354-441 (443)
221 2y38_A Laminin subunit alpha-5 82.7 1.4 4.7E-05 48.3 5.8 48 64-127 107-154 (403)
222 4dxt_A SUN domain-containing p 79.5 20 0.00069 35.0 12.4 118 38-191 68-196 (198)
223 3nng_A Uncharacterized protein 75.5 5.5 0.00019 34.9 6.1 65 37-104 37-102 (168)
224 1gqp_A DOC1/APC10; cell cycle, 75.3 4.3 0.00015 40.1 6.2 70 29-105 62-133 (221)
225 3ecq_A Protein SPR0328, endo-a 74.5 0.63 2.1E-05 56.8 0.0 61 37-100 1470-1530(1531)
226 3zyj_B Netrin-G1; cell adhesio 68.2 4.7 0.00016 44.3 5.1 80 20-105 55-167 (426)
227 1u34_A CRFR2B, corticotropin r 47.7 9.6 0.00033 33.8 2.5 31 827-857 63-98 (119)
228 4ers_A GL-R, glucagon receptor 39.7 13 0.00045 31.6 2.1 31 826-856 46-81 (96)
229 3n7s_A Calcitonin gene-related 39.0 15 0.00053 32.3 2.5 31 826-856 62-95 (115)
230 2xtt_A Protease inhibitor SGPI 38.6 34 0.0012 23.3 3.5 30 769-807 4-33 (36)
231 3n7s_A Calcitonin gene-related 38.5 18 0.00063 31.8 2.9 31 685-715 62-95 (115)
232 2l27_A Seven transmembrane hel 34.7 8.3 0.00028 32.0 0.0 30 827-856 37-71 (84)
233 3c5t_A Glucagon-like peptide 1 33.9 27 0.00094 31.1 3.3 30 685-714 54-88 (122)
234 2l27_A Seven transmembrane hel 33.5 9.2 0.00031 31.7 0.1 30 686-715 37-71 (84)
235 2qkh_A Glucose-dependent insul 31.8 19 0.00067 32.7 2.0 30 826-855 73-107 (135)
236 2x57_A Vasoactive intestinal p 31.6 22 0.00075 31.4 2.2 33 685-718 65-101 (116)
237 3c5t_A Glucagon-like peptide 1 30.8 24 0.00082 31.5 2.4 29 826-854 54-87 (122)
238 2qkh_A Glucose-dependent insul 30.6 23 0.00079 32.2 2.3 30 685-714 73-107 (135)
239 4ers_A GL-R, glucagon receptor 29.9 29 0.001 29.5 2.7 32 684-715 45-81 (96)
240 2jod_A Pituitary adenylate cyc 28.5 30 0.001 30.0 2.5 33 826-859 53-91 (106)
241 1u34_A CRFR2B, corticotropin r 26.8 18 0.00061 32.1 0.8 30 686-715 63-97 (119)
242 2xdg_A Growth hormone-releasin 26.3 19 0.00066 30.4 0.9 33 826-859 39-75 (92)
243 2x57_A Vasoactive intestinal p 26.2 23 0.0008 31.2 1.4 33 826-859 65-101 (116)
244 2jod_A Pituitary adenylate cyc 24.8 38 0.0013 29.3 2.5 33 685-718 53-91 (106)
245 2xdg_A Growth hormone-releasin 24.2 31 0.0011 29.1 1.8 32 685-717 39-74 (92)
246 1emn_A Fibrillin; extracellula 22.1 89 0.003 25.2 4.2 54 449-510 26-81 (82)
No 1
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=7.3e-70 Score=679.82 Aligned_cols=536 Identities=26% Similarity=0.527 Sum_probs=442.8
Q ss_pred CCCCCCCCcceeeEee-cccccCCCeEEEECCCCceeeCCceeEeC-C----CcccCCCCcccccccCCCCCCcceeeee
Q psy11954 278 ANCGSPDRHVNTTFVG-TVSTKLGSTISYACPEGNMLVGSATRTCK-E----GFWTGVAPTCQYFQLQPMDVPNLVLYLF 351 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~-~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~----G~Ws~~~P~C~~~~~~p~~~~~~~~~~~ 351 (881)
+.|+.|+.+.||.+.. ...|.+|++|+|+|+.||+|+|..+++|+ + |.|+...|.|+....
T Consensus 1 i~C~~Pp~i~nG~~~~~~~~~~~G~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~------------- 67 (951)
T 2gsx_A 1 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNK------------- 67 (951)
T ss_pred CcCCCCCCCCCCcEeccCCcccCCCEEEEECCCCcEEeCCCceEEeCCCCcccEECCCCceeEeccc-------------
Confidence 4699999999999875 45899999999999999999999999999 3 679998999986100
Q ss_pred hhhhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecCCCcccC-CCCccccc---cc
Q psy11954 352 LSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNG-TEPQCLFD---WC 427 (881)
Q Consensus 352 ~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~-~~P~C~~~---~C 427 (881)
.+.|+.| .++||.+......|.+|++|+|+|++||.|.|..+++|+++|+|++ ..|.|+++ .|
T Consensus 68 ------------~~~C~~p-~~~~g~~~~~~~~~~~g~~v~~~C~~Gy~l~g~~~~~C~~~g~Ws~~~~p~C~~~~~~~C 134 (951)
T 2gsx_A 68 ------------YSSCPEP-IVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEC 134 (951)
T ss_pred ------------cccCCCC-cCCCCeEeccCCCccCCCEEEEEeCCCceEcCCCceEECCCCccCCCCCCCcccCccCcC
Confidence 1468765 4566665433356889999999999999999999999999999998 58999987 89
Q ss_pred CCCCCcCCCeEEcC---CCCCCCeEEEEcCCCceeeCcee-----------------eecCCCCCCCCCCceeeccCcee
Q psy11954 428 AEPPQISGGIVTTS---GRRTGSVATYSCEPGFILFGSNV-----------------NIDCGRLTAIPYGSISYLNETTY 487 (881)
Q Consensus 428 ~~p~~~~ng~~~~~---~~~~gs~~~y~C~~Gy~l~g~~~-----------------~i~C~~p~~~~nG~~~~~~~~~~ 487 (881)
+.|+.+.||.+... .+.+|++++|+|+.||.|.|... .+.|+.|+.+.||.+... ..+.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~~~G~~v~y~C~~GY~l~g~~~~~C~~~G~Ws~~~p~C~~~~C~~~~~~~nG~v~~~-~~~~ 213 (951)
T 2gsx_A 135 PALPMIHNGHHTSENVGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTCEEARCKSLGRFPNGKVKEP-PILR 213 (951)
T ss_pred cCCCcCCcceEecccCcccCCCCEEEEECCCCccCCCcccEEeCCCCeECCCCCccccccCCCCCCCCCCcEeCC-CCcc
Confidence 99999999998753 57889999999999999998743 378988889999999764 4578
Q ss_pred cCcEEEEEcCCCcEEcCCCceeeccCC---cccCCcccccccccccceeccccccccccccCCCCCCCCCeeEEEec-cc
Q psy11954 488 LGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTG-ND 563 (881)
Q Consensus 488 ~gs~v~y~C~~Gy~L~G~~~~tC~~~G---~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~-~~ 563 (881)
+|++|+|+|++||.|.|...++|+.+| .|+ ..|+|+ .+.|+.|+.+.||.+.... ..
T Consensus 214 ~g~~~~~~C~~Gy~l~g~~~~~C~~~G~~~~W~-~~P~C~------------------~i~C~~p~~i~nG~~~~~~~~~ 274 (951)
T 2gsx_A 214 VGVTANFFCDEGYRLQGPPSSRCVIAGQGVAWT-KMPVCE------------------EIFCPSPPPILNGRHIGNSLAN 274 (951)
T ss_pred cCCEEEEEcCCCCEECccccEEEEcCCCccccC-CCCcCC------------------cCcCCCCCCcCCCceeccccCc
Confidence 999999999999999999999999999 997 789999 7899999999999877643 45
Q ss_pred cccCceEEEecCCCCcc-ceeeecCCCCCCcceeeeeec----CCccccc---------------eeee-ccCCCCCccc
Q psy11954 564 RLYGRTLIKTADSASSV-ATYKIGALPTLPAHSILSVTG----NDRLYGR---------------TLIK-TADSASSVAT 622 (881)
Q Consensus 564 ~~~g~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~----~~~~~~~---------------~~~~-~~~~~~~~~~ 622 (881)
..||+++.+.|+.+... ..+.. .....+.|.. ++.|.+. +.+. .+........
T Consensus 275 ~~~g~~v~y~C~~g~~~~~~y~l------~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~P~~~~~~~~~~~~~~ 348 (951)
T 2gsx_A 275 VSYGSIVTYTCDPDPEEGVNFIL------IGESTLRCTVDSQKTGTWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDR 348 (951)
T ss_pred ccCCCEEEEEcCCCCCCcceEEe------cCCceEEeccCCCCCCcCCCCCCcccccccceecCCCCCCCCcEeecCCCc
Confidence 67899999999887100 00110 0011122222 1222211 0011 1111123467
Q ss_pred ccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEecCC-CeecCcEEEEEcCCCceecC
Q psy11954 623 YKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSN-ATYYGTAVLYECDENYRLEG 701 (881)
Q Consensus 623 ~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~-~~~~g~~v~y~C~~Gy~L~G 701 (881)
|.+|++|+|+|++||.|.|+..++|+++|+|++..|+|+++ |+.|+.+.||.+..... .|.+|++|+|+|++||.|.|
T Consensus 349 y~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~-C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G 427 (951)
T 2gsx_A 349 YTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEKE-CQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVG 427 (951)
T ss_pred cccCCEEEEEcCCCCEEcCCCceEECCCCcCCCCCcccccc-cCCCCcccCCeEecCCCcccCCCCEEEEEcCCCCEECC
Confidence 89999999999999999999999999999999999999998 99999999999876432 35579999999999999999
Q ss_pred CceeeeccCCcccCCCCceeec--------------------------------ccCceeeeecCCeecCCCCccc--CC
Q psy11954 702 HARRLCLENGTWSSGLPTCKGN--------------------------------EGHARRLCLENGTWSSGLPTCK--GC 747 (881)
Q Consensus 702 ~~~~~C~~~G~Ws~~~P~C~~~--------------------------------~g~~~~~C~~~g~ws~~~p~C~--~C 747 (881)
+..++|+++|+|++..|+|+.+ .|...++|+.+|.|++..|+|+ .|
T Consensus 428 ~~~~~C~~~G~Ws~~~p~C~~~~C~~~~~~~~~~~~~~~~~~~~~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~i~C 507 (951)
T 2gsx_A 428 EESIQCTSEGVWTPPVPQCKVAACEATGRQLLTKPQHQFVRPDVNSSCGEGYKLSGSVYQECQGTIPWFMEIRLCKEITC 507 (951)
T ss_pred CCCeEECCCCcCCCCCCccceeeCCCCCcccccCCCCceecCeEEEEcCCCcEEcCCCeeEccCcccccCCCceecceeC
Confidence 9999999999999999999762 2556789999999999999997 89
Q ss_pred CCCCccc---c---CCCCccCCCeEEE-ccCC------ceeeccccCceeEEEEc----cCCeeecCCCccc----cccC
Q psy11954 748 KTPKKSL---T---RPALSCLPGKRFY-YHRG------IFRLQNTQKVSYTRTCT----KRGTWSGHIPTCK----AIDC 806 (881)
Q Consensus 748 ~~p~~~~---~---~~~~~~~g~~v~~-C~~G------y~l~G~~~~~~~~~~C~----~~G~Ws~~~p~C~----~v~C 806 (881)
++|+.+. + ....|.+|++|+| |++| |.|.|+ .+++|+ ++|.|++..|+|+ .+.|
T Consensus 508 ~~pp~i~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~~~y~l~G~-----~~~~C~~~~~~~G~Ws~~~P~C~~~~~~~~C 582 (951)
T 2gsx_A 508 PPPPVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGE-----STIRCTSNDQERGTWSGPAPLCKLSLLAVQC 582 (951)
T ss_pred CCCCCCCCCeEeCCCCCccccCCEEEEEcCCCCCCCceEEEecC-----ceEEecccCCCCccCcCCCceeecCCCccCC
Confidence 9988771 1 1235889999999 9999 999999 999999 8999999999996 7899
Q ss_pred CCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCeeEeCCCCeecCCCCceeccCCCCCCC
Q psy11954 807 SHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIPG 871 (881)
Q Consensus 807 ~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~~~~~~ 871 (881)
+.|..+.++.+......+.||++|+|+|++||.|.|+.+++|++||+|++.+|+|+++.|..+..
T Consensus 583 ~~p~~~~~~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~~C~~~~~ 647 (951)
T 2gsx_A 583 SHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQ 647 (951)
T ss_pred cCCCCCCCceEeCCCCcccCCCEEEEEeCCCCEEcCCCceEECCCCCCCCCCCcceecccCCCCC
Confidence 99987766666555556889999999999999999999999999999999999999998876643
No 2
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain, immune system; NMR {Homo sapiens}
Probab=100.00 E-value=8.5e-69 Score=670.21 Aligned_cols=539 Identities=24% Similarity=0.530 Sum_probs=445.3
Q ss_pred CCCCCCCCcceeeEeec--ccccCCCeEEEECCCCceeeCCceeEeC-CCcccCCCCcccccccCCCCCCcceeeeehhh
Q psy11954 278 ANCGSPDRHVNTTFVGT--VSTKLGSTISYACPEGNMLVGSATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSK 354 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~--~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~~~~~~~~ 354 (881)
..|..|+.+.||.+... ..|.+|++|+|+|++||+|.|..+++|+ +|.|+...|+|++
T Consensus 132 ~~C~~~~~~~~g~~~~~~~~~~~~G~~v~y~C~~GY~l~g~~~~~C~~~G~Ws~~~p~C~~------------------- 192 (951)
T 2gsx_A 132 LECPALPMIHNGHHTSENVGSIAPGLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTCEE------------------- 192 (951)
T ss_pred CcCcCCCcCCcceEecccCcccCCCCEEEEECCCCccCCCcccEEeCCCCeECCCCCcccc-------------------
Confidence 47999999999987753 4799999999999999999999999999 9999998999998
Q ss_pred hhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecCCC---cccCCCCcccccccCCCC
Q psy11954 355 LFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGG---KWNGTEPQCLFDWCAEPP 431 (881)
Q Consensus 355 ~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~ 431 (881)
+.|+.++.+.||.+... ..+.+|++++|+|++||.|.|...++|+.+| .|+ ..|.|+.+.|+.|+
T Consensus 193 ----------~~C~~~~~~~nG~v~~~-~~~~~g~~~~~~C~~Gy~l~g~~~~~C~~~G~~~~W~-~~P~C~~i~C~~p~ 260 (951)
T 2gsx_A 193 ----------ARCKSLGRFPNGKVKEP-PILRVGVTANFFCDEGYRLQGPPSSRCVIAGQGVAWT-KMPVCEEIFCPSPP 260 (951)
T ss_pred ----------ccCCCCCCCCCCcEeCC-CCcccCCEEEEEcCCCCEECccccEEEEcCCCccccC-CCCcCCcCcCCCCC
Confidence 89999889999998754 4588999999999999999999999999999 997 79999999999999
Q ss_pred CcCCCeEEc---CCCCCCCeEEEEcCCC------ceeeCcee-------------------------eecCCCCCCCCCC
Q psy11954 432 QISGGIVTT---SGRRTGSVATYSCEPG------FILFGSNV-------------------------NIDCGRLTAIPYG 477 (881)
Q Consensus 432 ~~~ng~~~~---~~~~~gs~~~y~C~~G------y~l~g~~~-------------------------~i~C~~p~~~~nG 477 (881)
.+.||.+.. ..+.+|++++|+|+.| |.|.|... .+.|+.|..+.++
T Consensus 261 ~i~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~~~y~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~P~~~~~~ 340 (951)
T 2gsx_A 261 PILNGRHIGNSLANVSYGSIVTYTCDPDPEEGVNFILIGESTLRCTVDSQKTGTWSGPAPRCELSTSAVQCPHPQILRGR 340 (951)
T ss_pred CcCCCceeccccCcccCCCEEEEEcCCCCCCcceEEecCCceEEeccCCCCCCcCCCCCCcccccccceecCCCCCCCCc
Confidence 999999886 4678999999999999 99987542 3568888878888
Q ss_pred ceeeccCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceeccccccccccccCCCCCCCCCeeE
Q psy11954 478 SISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSIL 557 (881)
Q Consensus 478 ~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~ 557 (881)
.+......|.+|++|+|+|++||.|.|+..++|+++|+|++..|+|+ ++ |+.|+.+.||.+
T Consensus 341 ~~~~~~~~y~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~------------------~~-C~~p~~~~ng~~ 401 (951)
T 2gsx_A 341 MVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCE------------------KE-CQAPPNILNGQK 401 (951)
T ss_pred EeecCCCccccCCEEEEEcCCCCEEcCCCceEECCCCcCCCCCcccc------------------cc-cCCCCcccCCeE
Confidence 77766677899999999999999999999999999999999999999 56 999999999987
Q ss_pred EEecc-ccccCceEEEecCCCCccc-----eee-ec----CCCCC--------C--------------------------
Q psy11954 558 SVTGN-DRLYGRTLIKTADSASSVA-----TYK-IG----ALPTL--------P-------------------------- 592 (881)
Q Consensus 558 ~~~~~-~~~~g~~~~~~~~~~~~~~-----~~~-~~----~~p~~--------~-------------------------- 592 (881)
..... .+..|+++.+.|+.+.... ++. .| ..|.. +
T Consensus 402 ~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~p~C~~~~C~~~~~~~~~~~~~~~~~~~~~~~C~~Gy~l 481 (951)
T 2gsx_A 402 EDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQLLTKPQHQFVRPDVNSSCGEGYKL 481 (951)
T ss_pred ecCCCcccCCCCEEEEEcCCCCEECCCCCeEECCCCcCCCCCCccceeeCCCCCcccccCCCCceecCeEEEEcCCCcEE
Confidence 65432 2345888888888764211 110 11 11211 0
Q ss_pred -cceeeeeecCCccccc------------eeeeccCCCCC-cccccCCCEEEEEcCCC------CeecCCCceEec----
Q psy11954 593 -AHSILSVTGNDRLYGR------------TLIKTADSASS-VATYKIGALVKYRCERG------YKVEGEPLSTCE---- 648 (881)
Q Consensus 593 -~~~~~~~~~~~~~~~~------------~~~~~~~~~~~-~~~~~~Gs~v~~~C~~G------Y~l~G~~~~tC~---- 648 (881)
....+.|..++.|.+. +.|.++..... ...|.+|++|+|+|++| |.|.|+.+++|+
T Consensus 482 ~G~~~~~C~~~g~Ws~~~p~C~~i~C~~pp~i~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~~~y~l~G~~~~~C~~~~~ 561 (951)
T 2gsx_A 482 SGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQ 561 (951)
T ss_pred cCCCeeEccCcccccCCCceecceeCCCCCCCCCCeEeCCCCCccccCCEEEEEcCCCCCCCceEEEecCceEEecccCC
Confidence 0011222223333321 12333322221 23599999999999999 999999999999
Q ss_pred CCCceecCCCeee----cccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec-
Q psy11954 649 DTGSWSGSVPECI----YVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN- 723 (881)
Q Consensus 649 ~~G~Ws~~~P~C~----~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~- 723 (881)
.+|+|+++.|+|+ .+.|+.|..+.++.+......|.||++|+|+|++||.|.|+..++|+++|+|++++|+|+.+
T Consensus 562 ~~G~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~~ 641 (951)
T 2gsx_A 562 ERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKET 641 (951)
T ss_pred CCccCcCCCceeecCCCccCCcCCCCCCCceEeCCCCcccCCCEEEEEeCCCCEEcCCCceEECCCCCCCCCCCcceecc
Confidence 8999999999996 78999998777777765555677999999999999999999999999999999999999873
Q ss_pred ------------------------------ccCceeeee--cCCeecCCCCccc--CCCCCCccc---c---CCCCccCC
Q psy11954 724 ------------------------------EGHARRLCL--ENGTWSSGLPTCK--GCKTPKKSL---T---RPALSCLP 763 (881)
Q Consensus 724 ------------------------------~g~~~~~C~--~~g~ws~~~p~C~--~C~~p~~~~---~---~~~~~~~g 763 (881)
.|...++|+ ++|+|++..|+|+ .|+.|+.+. + ....|.+|
T Consensus 642 C~~~~~~~~~~~~g~~~~~~~~~C~~Gy~l~g~~~~~C~~~~~g~Ws~~~p~C~~i~C~~p~~i~nG~~~~~~~~~~~~g 721 (951)
T 2gsx_A 642 CQHVRQSLQELPAGSRVELVNTSCQDGYQLTGHAYQMCQDAENGIWFKKIPLCKVIHCHPPPVIVNGKHTGMMAENFLYG 721 (951)
T ss_pred cCCCCCCcCCCCcCCEEEEEecCCCCCcEECCCccceeecCCCceeCCCCceecceeCCCCCcCCCCeEecccCCCcccC
Confidence 144567899 8999999999998 799987761 1 22568899
Q ss_pred CeEEE-ccCCceeeccccCceeEEEEccC----CeeecCCCcccc----ccCCCCCCCCCceEEEc-cCcccCCCEEEEE
Q psy11954 764 GKRFY-YHRGIFRLQNTQKVSYTRTCTKR----GTWSGHIPTCKA----IDCSHPGSIDNGRVIIM-NQTTTYNSAVEYH 833 (881)
Q Consensus 764 ~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~----G~Ws~~~p~C~~----v~C~~p~~~~nG~~~~~-~~~~~~g~~v~f~ 833 (881)
++|+| |+.||.|.|+ .+++|+++ |.|++..|+|+. +.|+.| .+.||.++.. ...|.+|++|+|+
T Consensus 722 ~~v~y~C~~Gy~l~G~-----~~~~C~~~~~g~g~Ws~~~P~C~~~~~~~~C~~p-~i~ng~~~~~~~~~y~~g~~v~~~ 795 (951)
T 2gsx_A 722 NEVSYECDQGFYLLGE-----KKLQCRSDSKGHGSWSGPSPQCLRSPPVTRCPNP-EVKHGYKLNKTHSAYSHNDIVYVD 795 (951)
T ss_pred CEEEEEeCCCceeCCC-----cceEEccCCCCCCcCCCCCCcccccCCCccCCCC-cCCCCceecCCCCccccCCEEEEE
Confidence 99999 9999999999 89999998 999999999998 899995 6789987643 2458899999999
Q ss_pred cCCCCEEcCCCeeEeCCCCeecCCCCceecc---CCCCCCCC
Q psy11954 834 CVPQYQRIGPYLRKCMEDGSWSGDEPRCEKR---FNSGIPGR 872 (881)
Q Consensus 834 C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~---~~~~~~~~ 872 (881)
|++||.|.|+..++|++||+|++.+|+|++. .|..++.+
T Consensus 796 C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~~~~~C~~pp~~ 837 (951)
T 2gsx_A 796 CNPGFIMNGSRVIRCHTDNTWVPGVPTCIKKAFIGCPPPPKT 837 (951)
T ss_pred cCCCcEEeCCceeEEccCCeECCCCceeecccccCCCCCCcC
Confidence 9999999999999999999999999999974 56655544
No 3
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=100.00 E-value=7.1e-67 Score=663.97 Aligned_cols=475 Identities=26% Similarity=0.525 Sum_probs=414.0
Q ss_pred CCCCCCCCCcceeeEee-cccccCCCeEEEECCCCceeeCCceeEeCCCcccCCCCcccccccCCCCCCcceeeeehhhh
Q psy11954 277 PANCGSPDRHVNTTFVG-TVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKL 355 (881)
Q Consensus 277 ~~~C~~p~~~~ng~~~~-~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~~G~Ws~~~P~C~~~~~~p~~~~~~~~~~~~~~~ 355 (881)
++.|..|+.+.||.+.. ...|.+|++|+|+|++||+|+|+.+++|+++.|++..|+|+.
T Consensus 548 ~~~C~~p~~~~~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~Ws~~~P~C~~-------------------- 607 (1213)
T 1haq_A 548 ERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHFGLSPDLPICKE-------------------- 607 (1213)
T ss_pred cccCCCCCccCCCccccccCccccCCEEEEEcCCCCEEcCCceeEEecCcEeCCCCccee--------------------
Confidence 47899999889997653 357999999999999999999999999997789999999962
Q ss_pred hhhccccccccCCCCCcCCCceEEecC-CcccCCcEEEEEeCCCcEEeCcceEEecCCCcccCCCCcc--cccccCCCCC
Q psy11954 356 FRESYERLNVDCGKLEHIEHGTVTLET-TRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQC--LFDWCAEPPQ 432 (881)
Q Consensus 356 ~~~~~~~~~~~C~~~~~~~nG~~~~~~-~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C--~~~~C~~p~~ 432 (881)
..+.|+.|+.+.||.+.... ..|.+|++|+|+|++||.|+|..+++|++ |+|++ .|.| +.+.|+.|+.
T Consensus 608 -------~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~-G~Ws~-~P~C~~~~~~C~~~~~ 678 (1213)
T 1haq_A 608 -------QVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQCVD-GEWTT-LPVCIVEESTCGDIPE 678 (1213)
T ss_pred -------ecccCcCCCCCCCCeEecccCccccCCCEEEEEeCCCceEcCCCeEEeCC-CeeCC-CcccccccCcCCCCCc
Confidence 01799999999999998764 36889999999999999999999999997 99999 9999 6789999999
Q ss_pred cCCCeEEcC--CCCCCCeEEEEcCCCceeeCcee---------------e------------------------------
Q psy11954 433 ISGGIVTTS--GRRTGSVATYSCEPGFILFGSNV---------------N------------------------------ 465 (881)
Q Consensus 433 ~~ng~~~~~--~~~~gs~~~y~C~~Gy~l~g~~~---------------~------------------------------ 465 (881)
+.||.+... .+.+|++++|+|++||+|.|... .
T Consensus 679 ~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~G~Ws~~p~C~~~~~~~~C~~p~~~~g~~~~~~~~~~~~gs~ 758 (1213)
T 1haq_A 679 LEHGWAQLSSPPYYYGDSVEFNCSESFTMIGHRSITCIHGVWTQLPQCVAIDKLKKCKSSNLIILEEHLKNKKEFDHNSN 758 (1213)
T ss_pred CCCCeeccCCCcccCCCEEEEEeCCCceeCCCCeEECCCCCccCccccccccccccCCCCCccCCcccccccccccCCCe
Confidence 999998764 57899999999999999987653 0
Q ss_pred -----------------------------e---cCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeeccC
Q psy11954 466 -----------------------------I---DCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES 513 (881)
Q Consensus 466 -----------------------------i---~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~ 513 (881)
+ .|++|+.++||.+......|.+|++|+|+|++||.|.|...++|+ +
T Consensus 759 v~y~C~~g~~~~~~~C~~G~W~~~p~C~~~~~~~C~~pp~i~ng~~~~~~~~~~~G~~v~y~C~~Gy~l~g~~~~~C~-~ 837 (1213)
T 1haq_A 759 IRYRCRGKEGWIHTVCINGRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEEITCK-D 837 (1213)
T ss_pred EEEEcCCCCcEEEEEeCCCCcCCCCccccccCCcCCCCCCCCCCeecCCCCcccCCCEEEEECCCCceeCCCCeeECC-C
Confidence 1 488888899998876656688999999999999999999999999 9
Q ss_pred CcccCCcccccccccccceecccccccccc-ccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCC
Q psy11954 514 KVWSDTAPKCEGKATKDIKVCSNVAVDRRE-IRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLP 592 (881)
Q Consensus 514 G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~-i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~ 592 (881)
|+|+. .|.|+ + +.|+.|+.+.||.+....
T Consensus 838 G~Ws~-~p~C~------------------~~~~C~~p~~~~ng~~~~~~------------------------------- 867 (1213)
T 1haq_A 838 GRWQS-IPLCV------------------EKIPCSQPPQIEHGTINSSR------------------------------- 867 (1213)
T ss_pred CCcCC-cceec------------------cCCcCCCCCccCCCEEeccc-------------------------------
Confidence 99999 99999 5 689999999999764321
Q ss_pred cceeeeeecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCC
Q psy11954 593 AHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVP 672 (881)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~ 672 (881)
.....|.+|++|+|+|++||.|.|+..++|+. |+|+. .|.|+++.|+.|+.+.
T Consensus 868 -------------------------~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~~-G~Ws~-~p~C~~~~C~~p~~~~ 920 (1213)
T 1haq_A 868 -------------------------SSQESYAHGTKLSYTCEGGFRISEENETTCYM-GKWSS-PPQCEGLPCKSPPEIS 920 (1213)
T ss_pred -------------------------CCCCcccCCCEEEEECCCCceECCCcceEECC-CcccC-CCceeecCCCCCCccC
Confidence 00135889999999999999999999999996 99997 7999999999999999
Q ss_pred CceEEecCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeecc----------------------------
Q psy11954 673 NGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNE---------------------------- 724 (881)
Q Consensus 673 nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~~---------------------------- 724 (881)
||.+......+.+|++|+|+|++||.|.|+..++|++ |+|++ +|.|+.+.
T Consensus 921 ng~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~-~~Ws~-~P~C~~~~C~~~p~~~ng~~~~~~~~~y~~g~~v~y 998 (1213)
T 1haq_A 921 HGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLG-EKWSH-PPSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVTY 998 (1213)
T ss_pred CceEeccCCccccCCEEEEECCCCceecCCCeeEECC-CccCC-CCceecCcCCCCCcCCCCEEeccCcCCEEcCCEEEE
Confidence 9999876677889999999999999999999999996 69999 89998431
Q ss_pred ---------cCceeeeecCCeecCCCCccc--CCCCCCccc------cCCCCccCCCeEEE-ccCCceeeccccCceeEE
Q psy11954 725 ---------GHARRLCLENGTWSSGLPTCK--GCKTPKKSL------TRPALSCLPGKRFY-YHRGIFRLQNTQKVSYTR 786 (881)
Q Consensus 725 ---------g~~~~~C~~~g~ws~~~p~C~--~C~~p~~~~------~~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~ 786 (881)
|...++|+ +|+|++ .|+|+ .|+.|+.+. .....|.+|++++| |+.||+|.|+ .++
T Consensus 999 ~C~~Gy~l~G~~~~~C~-~g~Ws~-~P~C~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~gy~l~G~-----~~~ 1071 (1213)
T 1haq_A 999 TCATYYKMDGASNVTCI-NSRWTG-RPTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGD-----EEV 1071 (1213)
T ss_pred ECCCCCEecCCCccccc-CCccCC-CCccccccCCCCccccCceEeccCCCcccCCCEEEEEeCCCCcccCC-----cee
Confidence 45578899 999999 99998 799887661 12456889999999 9999999999 999
Q ss_pred EEccCCeeecCCCccccc--cCCCCCCCCCceEEEc-cCcccCCCEEEEEcCCCCEEcCCCeeEeCCCCeecCCCCceec
Q psy11954 787 TCTKRGTWSGHIPTCKAI--DCSHPGSIDNGRVIIM-NQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEK 863 (881)
Q Consensus 787 ~C~~~G~Ws~~~p~C~~v--~C~~p~~~~nG~~~~~-~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~ 863 (881)
+|+ +|+| ...|+|+.+ .|+.|+.|.||.++.. ...|.+|++|+|+|++||.|.|+.+++| .||+|++. |+|++
T Consensus 1072 ~C~-~G~W-~~~p~C~~~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~gy~l~G~~~~~C-~~G~Ws~~-P~C~~ 1147 (1213)
T 1haq_A 1072 MCL-NGNW-TEPPQCKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITC-RNGQWSEP-PKCLH 1147 (1213)
T ss_pred EcC-CCCc-CCCceeECCCCCCCCCCCcCCCeeecCCccccCCCCEEEEECCCCCEECCCCeeEc-CCCccCCC-ccccC
Confidence 999 9999 679999977 7999999999998763 3457889999999999999999999999 89999997 99997
Q ss_pred cCCCCCCCC
Q psy11954 864 RFNSGIPGR 872 (881)
Q Consensus 864 ~~~~~~~~~ 872 (881)
. |...+.+
T Consensus 1148 ~-C~~~~~~ 1155 (1213)
T 1haq_A 1148 P-CVISREI 1155 (1213)
T ss_pred C-CCCCccc
Confidence 5 4444443
No 4
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A 3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Probab=100.00 E-value=6.1e-66 Score=655.37 Aligned_cols=523 Identities=22% Similarity=0.473 Sum_probs=424.8
Q ss_pred CCCCCCCCcceeeEeec-ccccCCCeEEEECCCCceeeCC---ceeEeC-CCcccCCCCcccccccCCCCCCcceeeeeh
Q psy11954 278 ANCGSPDRHVNTTFVGT-VSTKLGSTISYACPEGNMLVGS---ATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLVLYLFL 352 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~-~~~~~gs~v~y~C~~Gy~l~G~---~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~~~~~~ 352 (881)
..|..| .+.||.+... ..|.+|++|+|+|++||+|.|. .+++|+ +| |+. .|.|++
T Consensus 489 ~~C~~p-~~~n~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~-~p~C~~----------------- 548 (1213)
T 1haq_A 489 KSCDIP-VFMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIVCGYNG-WSD-LPICYE----------------- 548 (1213)
T ss_pred cccCCc-ccccceeccCccccccCCEEEEEcCCCceecCCCCCcceEecCCC-CCC-CCeeec-----------------
Confidence 568865 4678887754 4699999999999999999984 579999 88 997 799998
Q ss_pred hhhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecCCCcccCCCCccc--ccccCCC
Q psy11954 353 SKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL--FDWCAEP 430 (881)
Q Consensus 353 ~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~--~~~C~~p 430 (881)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+.+++|+++ .|++..|+|+ ++.|+.|
T Consensus 549 ------------~~C~~p~~~~~g~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~-~Ws~~~P~C~~~~~~C~~p 615 (1213)
T 1haq_A 549 ------------RECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHF-GLSPDLPICKEQVQSCGPP 615 (1213)
T ss_pred ------------ccCCCCCccCCCccccccCccccCCEEEEEcCCCCEEcCCceeEEecC-cEeCCCCcceeecccCcCC
Confidence 899999999999877666678999999999999999999999999975 4999999995 7899999
Q ss_pred CCcCCCeEEcC---CCCCCCeEEEEcCCCceeeCcee-----------------eecCCCCCCCCCCceeeccCceecCc
Q psy11954 431 PQISGGIVTTS---GRRTGSVATYSCEPGFILFGSNV-----------------NIDCGRLTAIPYGSISYLNETTYLGS 490 (881)
Q Consensus 431 ~~~~ng~~~~~---~~~~gs~~~y~C~~Gy~l~g~~~-----------------~i~C~~p~~~~nG~~~~~~~~~~~gs 490 (881)
+.+.||.+... .+.+|++++|+|++||.|.|... .+.|++|+.+.||.+......|.+|+
T Consensus 616 ~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~G~Ws~~P~C~~~~~~C~~~~~~~nG~~~~~~~~~~~g~ 695 (1213)
T 1haq_A 616 PELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQCVDGEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGD 695 (1213)
T ss_pred CCCCCCeEecccCccccCCCEEEEEeCCCceEcCCCeEEeCCCeeCCCcccccccCcCCCCCcCCCCeeccCCCcccCCC
Confidence 99999999875 47899999999999999999764 36788999999999988777789999
Q ss_pred EEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceecccccccccccc----CCCCCCCCCeeEEEecccccc
Q psy11954 491 EVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIR----CPEPTLPAHSILSVTGNDRLY 566 (881)
Q Consensus 491 ~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i~----C~~p~~~~ng~~~~~~~~~~~ 566 (881)
+|+|+|++||+|.|...++| .+|+|+ ++|+|+ .+. |+.|..+.+..+......+.+
T Consensus 696 ~~~~~C~~Gy~l~G~~~~~C-~~G~Ws-~~p~C~------------------~~~~~~~C~~p~~~~g~~~~~~~~~~~~ 755 (1213)
T 1haq_A 696 SVEFNCSESFTMIGHRSITC-IHGVWT-QLPQCV------------------AIDKLKKCKSSNLIILEEHLKNKKEFDH 755 (1213)
T ss_pred EEEEEeCCCceeCCCCeEEC-CCCCcc-Cccccc------------------cccccccCCCCCccCCcccccccccccC
Confidence 99999999999999999999 799999 899999 443 988877644433222233446
Q ss_pred CceEEEecCCCCc--cceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCc
Q psy11954 567 GRTLIKTADSASS--VATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPL 644 (881)
Q Consensus 567 g~~~~~~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~ 644 (881)
|..+.+.|+.+.. ...+..|.+-..|.+..+. .+.....+.|.++........|.+|++|+|+|++||+|.|+..
T Consensus 756 gs~v~y~C~~g~~~~~~~C~~G~W~~~p~C~~~~---~~~C~~pp~i~ng~~~~~~~~~~~G~~v~y~C~~Gy~l~g~~~ 832 (1213)
T 1haq_A 756 NSNIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQ---IQLCPPPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEE 832 (1213)
T ss_pred CCeEEEEcCCCCcEEEEEeCCCCcCCCCcccccc---CCcCCCCCCCCCCeecCCCCcccCCCEEEEECCCCceeCCCCe
Confidence 7777787776511 0000001110011111110 0000011123333323333568999999999999999999999
Q ss_pred eEecCCCceecCCCeeec-ccCCCCCCCCCceEEecCC---CeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCce
Q psy11954 645 STCEDTGSWSGSVPECIY-VDCGNPETVPNGGFTLTSN---ATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTC 720 (881)
Q Consensus 645 ~tC~~~G~Ws~~~P~C~~-v~C~~p~~~~nG~~~~~~~---~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C 720 (881)
++|+ +|+|+. .|.|++ +.|+.|+.+.||.+..... .|.+|++|+|+|++||.|.|+..++|+. |+|++ +|.|
T Consensus 833 ~~C~-~G~Ws~-~p~C~~~~~C~~p~~~~ng~~~~~~~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~~-G~Ws~-~p~C 908 (1213)
T 1haq_A 833 ITCK-DGRWQS-IPLCVEKIPCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCYM-GKWSS-PPQC 908 (1213)
T ss_pred eECC-CCCcCC-cceeccCCcCCCCCccCCCEEecccCCCCcccCCCEEEEECCCCceECCCcceEECC-CcccC-CCce
Confidence 9999 999998 999998 6999999999999986433 3678999999999999999999999995 99997 7999
Q ss_pred eecc------------------------------------cCceeeeecCCeecCCCCccc--CCCCCCccc------cC
Q psy11954 721 KGNE------------------------------------GHARRLCLENGTWSSGLPTCK--GCKTPKKSL------TR 756 (881)
Q Consensus 721 ~~~~------------------------------------g~~~~~C~~~g~ws~~~p~C~--~C~~p~~~~------~~ 756 (881)
+++. |...++|+. |+|++ .|.|+ .|+.|+.+. ..
T Consensus 909 ~~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~-~~Ws~-~P~C~~~~C~~~p~~~ng~~~~~~ 986 (1213)
T 1haq_A 909 EGLPCKSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLG-EKWSH-PPSCIKTDCLSLPSFENAIPMGEK 986 (1213)
T ss_pred eecCCCCCCccCCceEeccCCccccCCEEEEECCCCceecCCCeeEECC-CccCC-CCceecCcCCCCCcCCCCEEeccC
Confidence 8741 456788998 59999 99998 799777651 12
Q ss_pred CCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCceEEEc-cCcccCCCEEEEEc
Q psy11954 757 PALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIM-NQTTTYNSAVEYHC 834 (881)
Q Consensus 757 ~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~~~~~-~~~~~~g~~v~f~C 834 (881)
...|.+|++++| |+.||.|.|+ .+++|+ +|+|++ .|+|+.+.|+.|+.+.||.+... ...+.+|++|+|+|
T Consensus 987 ~~~y~~g~~v~y~C~~Gy~l~G~-----~~~~C~-~g~Ws~-~P~C~~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C 1059 (1213)
T 1haq_A 987 KDVYKAGEQVTYTCATYYKMDGA-----SNVTCI-NSRWTG-RPTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQC 1059 (1213)
T ss_pred cCCEEcCCEEEEECCCCCEecCC-----Cccccc-CCccCC-CCccccccCCCCccccCceEeccCCCcccCCCEEEEEe
Confidence 356889999999 9999999999 899999 999999 99999999999999999998753 34578899999999
Q ss_pred CCCCEEcCCCeeEeCCCCeecCCCCceecc--CCCCCCC
Q psy11954 835 VPQYQRIGPYLRKCMEDGSWSGDEPRCEKR--FNSGIPG 871 (881)
Q Consensus 835 ~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~--~~~~~~~ 871 (881)
++||.|.|+..++|+ ||+| ..+|+|+.+ .|+.++.
T Consensus 1060 ~~gy~l~G~~~~~C~-~G~W-~~~p~C~~~~~~C~~p~~ 1096 (1213)
T 1haq_A 1060 RSPYEMFGDEEVMCL-NGNW-TEPPQCKDSTGKCGPPPP 1096 (1213)
T ss_pred CCCCcccCCceeEcC-CCCc-CCCceeECCCCCCCCCCC
Confidence 999999999999999 9999 578999987 5766543
No 5
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=100.00 E-value=1.1e-64 Score=668.53 Aligned_cols=479 Identities=29% Similarity=0.611 Sum_probs=420.8
Q ss_pred CCCCCCCCCcceeeEeecccccCCCeEEEECCCCceeeCCceeEeC-CCc---ccCCCCcccccccCCCCCCcceeeeeh
Q psy11954 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCK-EGF---WTGVAPTCQYFQLQPMDVPNLVLYLFL 352 (881)
Q Consensus 277 ~~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G~---Ws~~~P~C~~~~~~p~~~~~~~~~~~~ 352 (881)
++.|..|+.+.||.+.....+.+|++|+|+|++||+|+|..+++|+ +|. |+...|.|++
T Consensus 510 ~~~C~~p~~~~nG~v~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~----------------- 572 (1931)
T 2q7z_A 510 RKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQR----------------- 572 (1931)
T ss_pred cCcCCCCCCCCCCeEEecCCcccCceEEEEeCCCcEECCccceEEEeCCCeeecCCCCceeEe-----------------
Confidence 4789999999999988766899999999999999999999999999 775 9999999998
Q ss_pred hhhhhhccccccccCCCCCcCCCceEEecC-CcccCCcEEEEEeCCC------cEEeCcceEEecCC----CcccCCCCc
Q psy11954 353 SKLFRESYERLNVDCGKLEHIEHGTVTLET-TRTTHGAVAIYACHEN------YTLIGETRRVCGDG----GKWNGTEPQ 421 (881)
Q Consensus 353 ~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~-~~~~~g~~~~~~C~~G------y~l~G~~~~~C~~~----G~Ws~~~P~ 421 (881)
+.|+.|+.+.||.+.... ..|.||++|+|+|++| |.|.|..+++|+++ |+|++..|+
T Consensus 573 ------------v~C~~p~~i~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~ 640 (1931)
T 2q7z_A 573 ------------IPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQ 640 (1931)
T ss_pred ------------eeCCCCCCcCCceEECCCCCCcccCCEEEEEECCCCCcccceEEeCCceeEeCCCCCcCceECCCCCc
Confidence 899999999999987543 4689999999999999 78999999999988 999999999
Q ss_pred cc-ccccCCCCCcCCCeEEcC---CCCCCCeEEEEcCCCceeeCcee----------------eecCCCCCCCCCCceee
Q psy11954 422 CL-FDWCAEPPQISGGIVTTS---GRRTGSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSISY 481 (881)
Q Consensus 422 C~-~~~C~~p~~~~ng~~~~~---~~~~gs~~~y~C~~Gy~l~g~~~----------------~i~C~~p~~~~nG~~~~ 481 (881)
|+ ++.| .++.+.||.+... .+.+|++++|+|+.||.|.|+.. .+.|.+|+.+.||.+..
T Consensus 641 C~~~~~C-~~P~i~nG~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~~C~~~p~~~~g~~~~ 719 (1931)
T 2q7z_A 641 CIIPNKC-TPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQ 719 (1931)
T ss_pred CCcCccc-CCCcccCCeEecCCCcccccCCEEEEEcCCCceEcCCCceEECCCCcCCCCCCccccccCCCCCCCCccccc
Confidence 99 7899 5667899998653 36789999999999999999765 35688899999999876
Q ss_pred cc-CceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceeccccccccccccCCCCC-CCCCeeEEE
Q psy11954 482 LN-ETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPT-LPAHSILSV 559 (881)
Q Consensus 482 ~~-~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~-~~~ng~~~~ 559 (881)
.. ..|.+|++|+|+|++||.|.|+..++|+++|+|++.+|+|+ .+.|+.|. .+.||.+..
T Consensus 720 ~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~------------------~~~C~~p~~~~~ng~v~~ 781 (1931)
T 2q7z_A 720 RDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCE------------------VKSCDDFMGQLLNGRVLF 781 (1931)
T ss_pred CCCCcccCCCEEEEECCCCCeeCCCCeeEECCCCeECCCCCccc------------------cccCCCccccCCCceEec
Confidence 43 45789999999999999999999999999999999999999 78898874 566765421
Q ss_pred eccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCee
Q psy11954 560 TGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKV 639 (881)
Q Consensus 560 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l 639 (881)
...|.+|++|+|+|++||+|
T Consensus 782 ------------------------------------------------------------~~~~~~G~~v~~~C~~Gy~l 801 (1931)
T 2q7z_A 782 ------------------------------------------------------------PVNLQLGAKVDFVCDEGFQL 801 (1931)
T ss_pred ------------------------------------------------------------CCCcccCCEEEEECCCCCEE
Confidence 13578899999999999999
Q ss_pred cCCCceEecC---CCceecCCCeeecccCCCCCCCCCceEEecC-CCeecCcEEEEEcCCC------ceecCCceeeecc
Q psy11954 640 EGEPLSTCED---TGSWSGSVPECIYVDCGNPETVPNGGFTLTS-NATYYGTAVLYECDEN------YRLEGHARRLCLE 709 (881)
Q Consensus 640 ~G~~~~tC~~---~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~-~~~~~g~~v~y~C~~G------y~L~G~~~~~C~~ 709 (881)
.|+..++|.. +|+|++..|.|+++.|+.|+.+.||.++... ..+.||++|+|+|++| |.|+|+.+++|++
T Consensus 802 ~G~~~~~C~~~g~~~~Ws~~~P~C~~i~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~~~l~G~~~~~C~~ 881 (1931)
T 2q7z_A 802 KGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIGESTIRCTS 881 (1931)
T ss_pred cCCCeeEeecCCCCCcccCCCCeeeeccCCCCCccCCceecccccCccccCCeEEEEeCCCCCcccceEecCCceEEeec
Confidence 9999999964 4579999999999999999999999886532 3567999999999999 9999999999986
Q ss_pred ----CCcccCCCCceeec--------------------------------------ccCceeeeecCCeecCCCCccc--
Q psy11954 710 ----NGTWSSGLPTCKGN--------------------------------------EGHARRLCLENGTWSSGLPTCK-- 745 (881)
Q Consensus 710 ----~G~Ws~~~P~C~~~--------------------------------------~g~~~~~C~~~g~ws~~~p~C~-- 745 (881)
+|+||+++|+|+.. .|...++|+++|+|++..|+|+
T Consensus 882 ~~~~~G~WS~~~P~C~~~~~C~~p~~~~~~~~~~~~~~~~~~~g~~v~y~C~~gy~~g~~~~~C~~~g~Ws~~~p~C~~~ 961 (1931)
T 2q7z_A 882 DPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTNASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKDVCKRK 961 (1931)
T ss_pred CCCCCCccCCCCCcccccccccCCCccccCceeeccCccccccCCEEEEEccCCccCCCceeEeCCCCccCCCCCeeecc
Confidence 89999999999741 1334678999999999999998
Q ss_pred CCCCCCcc---cc-CCCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCe---eecCCCccccccCCCCCCCCCceE
Q psy11954 746 GCKTPKKS---LT-RPALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGT---WSGHIPTCKAIDCSHPGSIDNGRV 817 (881)
Q Consensus 746 ~C~~p~~~---~~-~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~---Ws~~~p~C~~v~C~~p~~~~nG~~ 817 (881)
.|..|+.+ .+ ....+.+|++++| |++||+|.|. .+++|+.+|. |++..|+|+.+.|+.|+.+.||.+
T Consensus 962 ~C~~p~~~~nG~~~~~~~~~~gs~v~~~C~~Gy~l~G~-----~~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~ 1036 (1931)
T 2q7z_A 962 SCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGH-----SSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDF 1036 (1931)
T ss_pred ccCCCCCCCCceeeccCCcccCCEEEEEeCCCcEECCc-----cceEEEeCCcccccCCCCceeeeecCCCCCCCCCCce
Confidence 79998876 22 3456889999999 9999999999 9999999898 999999999999999999999998
Q ss_pred EEcc-CcccCCCEEEEEcCCC------CEEcCCCeeEeCCC----CeecCCCCceec-cCCCC
Q psy11954 818 IIMN-QTTTYNSAVEYHCVPQ------YQRIGPYLRKCMED----GSWSGDEPRCEK-RFNSG 868 (881)
Q Consensus 818 ~~~~-~~~~~g~~v~f~C~~G------y~l~G~~~~~C~~~----G~Ws~~~P~C~~-~~~~~ 868 (881)
...+ ..+.||++|+|+|++| |.|+|+.+++|++| |+|++..|+|+. +.|+.
T Consensus 1037 ~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~ 1099 (1931)
T 2q7z_A 1037 ISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTP 1099 (1931)
T ss_pred ecccCCcccCCCEEEEEcCCCCCccceeEEcCCcceEEecCCCccceecCCCCCCccCCcCCC
Confidence 7654 4588999999999999 99999999999998 999999999986 55643
No 6
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen, complement pathway, glycoprotein, immune response, innate immunity, membrane; NMR {Homo sapiens}
Probab=100.00 E-value=3.6e-64 Score=663.49 Aligned_cols=490 Identities=30% Similarity=0.617 Sum_probs=427.8
Q ss_pred CCccccccccccccccceeecCCCCCCCCCCcceeeEeecccccCCCeEEEECCCCceeeCCceeEeC-CC---cccCCC
Q psy11954 255 RGWLWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCK-EG---FWTGVA 330 (881)
Q Consensus 255 ~~~~Wnd~~C~~~~~~~iC~~~~~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G---~Ws~~~ 330 (881)
.+++|.... +.|+ ++.|+.|..+.||.+.....|.+|++|+|+|++||+|+|..+++|+ +| .|+...
T Consensus 47 ~~g~W~~~~-------~~c~--~~~C~~p~~~~nG~~~~~~~~~~g~~v~~~C~~GY~L~G~~~~~C~~~g~~~~Ws~~~ 117 (1931)
T 2q7z_A 47 KNSVWTGAK-------DRCR--RKSCRNPPDPVNGMVHVIKGIQFGSQIKYSCTKGYRLIGSSSATCIISGDTVIWDNET 117 (1931)
T ss_pred CCCccCCCC-------Cccc--CCCCcCCCCCCCCeEEecCCeEeCCEEEEEECCCCEEcCCccceEecCCCccccCCCC
Confidence 455787631 3454 4799999999999997556799999999999999999999999999 88 899999
Q ss_pred CcccccccCCCCCCcceeeeehhhhhhhccccccccCCCCCcCCCceEEec-CCcccCCcEEEEEeCCC------cEEeC
Q psy11954 331 PTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLE-TTRTTHGAVAIYACHEN------YTLIG 403 (881)
Q Consensus 331 P~C~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~-~~~~~~g~~~~~~C~~G------y~l~G 403 (881)
|.|+. +.|+.|+.+.||.+... ...|.||++|+|+|++| |.|.|
T Consensus 118 P~C~~-----------------------------~~C~~pp~~~nG~~~~~~~~~~~~g~~v~y~C~~g~~~~~~y~l~G 168 (1931)
T 2q7z_A 118 PICDR-----------------------------IPCGLPPTITNGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVG 168 (1931)
T ss_pred CEeee-----------------------------ccCCCCCcCCCCeEeccCCCccccCCEEEEEeCCCCCCceeEEecC
Confidence 99998 89999999999998653 23578999999999999 99999
Q ss_pred cceEEecCC----CcccCCCCcc-cccccCCCCCcCCCeEEcC---CCCCCCeEEEEcCCCceeeCcee-----------
Q psy11954 404 ETRRVCGDG----GKWNGTEPQC-LFDWCAEPPQISGGIVTTS---GRRTGSVATYSCEPGFILFGSNV----------- 464 (881)
Q Consensus 404 ~~~~~C~~~----G~Ws~~~P~C-~~~~C~~p~~~~ng~~~~~---~~~~gs~~~y~C~~Gy~l~g~~~----------- 464 (881)
...++|+++ |.|+++.|+| +++.|+.|. +.||.+... .+.+++++.|.|++||.|.|...
T Consensus 169 ~~~~~C~~~~~~~g~Ws~~~P~C~~~~~C~~p~-~~nG~~~~~~~~~~~~~~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws~ 247 (1931)
T 2q7z_A 169 EPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPN-VENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEP 247 (1931)
T ss_pred CceEEEccCCCcCceECCCCCCcccccCCCCCC-CCCeEEeCCCCCccccCCEEEEEcCCCceeCCcceEEEcCCCeECC
Confidence 999999986 9999999999 678999766 468988753 46789999999999999999865
Q ss_pred -----eecCCCCCCCCCCceeecc-CceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceeccccc
Q psy11954 465 -----NIDCGRLTAIPYGSISYLN-ETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538 (881)
Q Consensus 465 -----~i~C~~p~~~~nG~~~~~~-~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~ 538 (881)
...|..|+.++||.+.... ..|.+|++|+|+|++||.|.|...++|+++|+|+..+|+|+
T Consensus 248 ~~P~C~~~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~-------------- 313 (1931)
T 2q7z_A 248 ELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCE-------------- 313 (1931)
T ss_pred CCceeeccccCCCCCcCceeecccCCCCCCCCEEEEEcCCCCeecCCCceEecCCCeECCCCCccc--------------
Confidence 2378889999999998753 45789999999999999999999999999999999999999
Q ss_pred cccccccCCCC-CCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCC
Q psy11954 539 VDRREIRCPEP-TLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSA 617 (881)
Q Consensus 539 ~~~~~i~C~~p-~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (881)
.+.|+.+ ..+.||.+..
T Consensus 314 ----~~~C~~~~~~~~ng~~~~---------------------------------------------------------- 331 (1931)
T 2q7z_A 314 ----VKSCDDFMGQLLNGRVLF---------------------------------------------------------- 331 (1931)
T ss_pred ----ccccCCCCcCCCCceEec----------------------------------------------------------
Confidence 7889875 4566665421
Q ss_pred CCcccccCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecccCCCCCCCCCceEEecC-CCeecCcEEEEEc
Q psy11954 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVDCGNPETVPNGGFTLTS-NATYYGTAVLYEC 693 (881)
Q Consensus 618 ~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~-~~~~~g~~v~y~C 693 (881)
...+.+|++|+|+|++||+|.|+..++|+.+| .|++..|+|+++.|+.|+.+.||.++... ..+.||++|+|+|
T Consensus 332 --~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~i~C~~p~~~~ng~~~~~~~~~~~~g~~v~y~C 409 (1931)
T 2q7z_A 332 --PVNLQLGAKVDFVCDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTC 409 (1931)
T ss_pred --CCCcccCCEEEEECCCCCEeCCCCccccccCCCcceecCCCCeeEeccCCCCCCCCccceecccccceecCCEEEEEc
Confidence 13567899999999999999999999999999 89999999999999999999999987643 3467999999999
Q ss_pred CC------CceecCCceeeec----cCCcccCCCCceeec--------------------------------------cc
Q psy11954 694 DE------NYRLEGHARRLCL----ENGTWSSGLPTCKGN--------------------------------------EG 725 (881)
Q Consensus 694 ~~------Gy~L~G~~~~~C~----~~G~Ws~~~P~C~~~--------------------------------------~g 725 (881)
++ ||.|+|..+++|+ ++|.||+++|+|+.+ .|
T Consensus 410 ~~~~~~g~gy~l~g~~~~~C~~~~~~~g~Ws~~~P~C~~~~~C~~p~~~~~~~~~~~~~~~~~~~g~~v~y~C~~Gy~~g 489 (1931)
T 2q7z_A 410 DPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTNASDFPIGTSLKYECRPEYYGR 489 (1931)
T ss_pred CCCCccCcceEecCCcccEeecCCCCCCcccCCCCccccccccCCccccccCcccccccccccCCCCEEEEeCCCCccCC
Confidence 99 8999999999995 789999999999754 12
Q ss_pred CceeeeecCCeecCCCCccc--CCCCCCcc----ccCCCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCe---ee
Q psy11954 726 HARRLCLENGTWSSGLPTCK--GCKTPKKS----LTRPALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGT---WS 795 (881)
Q Consensus 726 ~~~~~C~~~g~ws~~~p~C~--~C~~p~~~----~~~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~---Ws 795 (881)
...++|+++|+|+...|+|+ .|+.|+.+ +.....+.+|++++| |+.||+|+|. .+++|+.+|+ |+
T Consensus 490 ~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~v~~~~~~~~g~~v~y~C~~Gy~l~G~-----~~~~C~~~g~~~~Ws 564 (1931)
T 2q7z_A 490 PFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGH-----SSAECILSGNAAHWS 564 (1931)
T ss_pred CeeEEECCCCeECCCCCccccCcCCCCCCCCCCeEEecCCcccCceEEEEeCCCcEECCc-----cceEEEeCCCeeecC
Confidence 34678999999999999997 79998766 223457889999999 9999999999 8999999885 99
Q ss_pred cCCCccccccCCCCCCCCCceEEEcc-CcccCCCEEEEEcCCC------CEEcCCCeeEeCCC----CeecCCCCcee-c
Q psy11954 796 GHIPTCKAIDCSHPGSIDNGRVIIMN-QTTTYNSAVEYHCVPQ------YQRIGPYLRKCMED----GSWSGDEPRCE-K 863 (881)
Q Consensus 796 ~~~p~C~~v~C~~p~~~~nG~~~~~~-~~~~~g~~v~f~C~~G------y~l~G~~~~~C~~~----G~Ws~~~P~C~-~ 863 (881)
...|.|+++.|+.|+.|.||.+...+ ..+.||++|+|+|++| |.|.|+.+++|++| |+|++..|+|+ .
T Consensus 565 ~~~P~C~~v~C~~p~~i~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~ 644 (1931)
T 2q7z_A 565 TKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIP 644 (1931)
T ss_pred CCCceeEeeeCCCCCCcCCceEECCCCCCcccCCEEEEEECCCCCcccceEEeCCceeEeCCCCCcCceECCCCCcCCcC
Confidence 99999999999999999999987543 4478999999999999 78999999999998 99999999999 6
Q ss_pred cCC
Q psy11954 864 RFN 866 (881)
Q Consensus 864 ~~~ 866 (881)
+.|
T Consensus 645 ~~C 647 (1931)
T 2q7z_A 645 NKC 647 (1931)
T ss_pred ccc
Confidence 777
No 7
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=100.00 E-value=1.5e-48 Score=428.09 Aligned_cols=290 Identities=25% Similarity=0.588 Sum_probs=254.5
Q ss_pred ecCCCCCCCCCCceeec--cCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceecccccccccc
Q psy11954 466 IDCGRLTAIPYGSISYL--NETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRRE 543 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~~--~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~ 543 (881)
..|.+||.++|+.+... ...|.+|++|+|+|++|| +.|...++|+++|+|+...|.|+ +
T Consensus 3 ~~C~~Pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~------------------~ 63 (320)
T 1ntj_A 3 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCI------------------R 63 (320)
T ss_pred CcCcCCCcCCcceeccccccccCCCCCEEEEEcCCCC-CCCCCeEEECCCCEECCCCCccc------------------c
Confidence 46999999999988643 235889999999999999 56778899999999999899999 7
Q ss_pred ccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcccc
Q psy11954 544 IRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATY 623 (881)
Q Consensus 544 i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (881)
+.|+.|..+.||.+.+. ..|
T Consensus 64 ~~C~~p~~~~nG~~~~~------------------------------------------------------------~~~ 83 (320)
T 1ntj_A 64 KQCETPLDPQNGIVHVN------------------------------------------------------------TDI 83 (320)
T ss_pred ccCcCCCCCCCCEEECC------------------------------------------------------------CCc
Confidence 89999999999876321 246
Q ss_pred cCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecccCCCCCCCCCceEEecC-CCeecCcEEEEEcCCC---
Q psy11954 624 KIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVDCGNPETVPNGGFTLTS-NATYYGTAVLYECDEN--- 696 (881)
Q Consensus 624 ~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~-~~~~~g~~v~y~C~~G--- 696 (881)
.+|++|+|+|++||+|.|+..++|+.+| .|++..|.|+++.|+.|+.+.||.+.... ..+.+|++|+|+|++|
T Consensus 84 ~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~ 163 (320)
T 1ntj_A 84 RFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARG 163 (320)
T ss_pred ccCCEEEEEcCCCCEECCCCceEEEeCCCCeeeCCCCCcCcCCCCCCCCCCCCCcEecCCCCccccCCEEEEECCCCCCC
Confidence 7899999999999999999999999887 89999999999999999999999987533 4567999999999999
Q ss_pred ---ceecCCceeeeccC----CcccCCCCceee-cccCceeeeecCCeecCCCCcccCCCCCCcc---cc--CCCCccCC
Q psy11954 697 ---YRLEGHARRLCLEN----GTWSSGLPTCKG-NEGHARRLCLENGTWSSGLPTCKGCKTPKKS---LT--RPALSCLP 763 (881)
Q Consensus 697 ---y~L~G~~~~~C~~~----G~Ws~~~P~C~~-~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~~--~~~~~~~g 763 (881)
|.|.|...++|+++ |+|++++|+|+. + .|+.|.+. +. ....|.+|
T Consensus 164 ~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~----------------------~C~~p~~~ng~~~~~~~~~~~~g 221 (320)
T 1ntj_A 164 KKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELN----------------------KCTPPHVENAVIVSKNKSLFSLR 221 (320)
T ss_pred cceEEEeCCCceEEecCCCCCCEECCCCccccccC----------------------CCCCCCCCCCeEeCCCCCcccCC
Confidence 99999999999987 999999999986 4 58876444 11 23468899
Q ss_pred CeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccc-cCCCCC-CCCCceEEEccCcccCCCEEEEEcCCCCEE
Q psy11954 764 GKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAI-DCSHPG-SIDNGRVIIMNQTTTYNSAVEYHCVPQYQR 840 (881)
Q Consensus 764 ~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v-~C~~p~-~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l 840 (881)
++|+| |+.||.|.|+ .+++|+++|+|++..|+|+.+ .|+.|+ .+.||.+... ..+.+|++|+|+|++||+|
T Consensus 222 ~~v~f~C~~Gy~l~G~-----~~~~C~~~g~Ws~~~P~C~~~~~C~~p~~~~~ng~~~~~-~~~~~g~~v~~~C~~Gy~l 295 (320)
T 1ntj_A 222 DMVEFRCQDGFMMKGD-----SSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFVP-QNLQLGAKVTFVCNTGYQL 295 (320)
T ss_pred CEEEEECCCCCeECCC-----CCcEECCCCeECCCCCeeEcccccCCCCCCCCCCeEecC-CCcccCCEEEEEcCCCCEE
Confidence 99999 9999999999 899999999999999999986 899875 7899998754 3588999999999999999
Q ss_pred cCCCeeEeCCCCe---ecCCCCcee
Q psy11954 841 IGPYLRKCMEDGS---WSGDEPRCE 862 (881)
Q Consensus 841 ~G~~~~~C~~~G~---Ws~~~P~C~ 862 (881)
.|+..++|++||+ |++.+|+|+
T Consensus 296 ~G~~~~~C~~~G~~~~Ws~~~P~C~ 320 (320)
T 1ntj_A 296 KGNSSSHCVLDGVESIWNSSVPVCE 320 (320)
T ss_pred CCCCcCEeeCCCCcCccCCCCCccC
Confidence 9999999999999 999999995
No 8
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=100.00 E-value=3.8e-48 Score=424.13 Aligned_cols=294 Identities=25% Similarity=0.525 Sum_probs=253.9
Q ss_pred cCCCCCCCCCCceeecc-CceecCcEEEEEcCCCcEEc-CC-CceeeccCCcccCCcccccccccccceecccccccccc
Q psy11954 467 DCGRLTAIPYGSISYLN-ETTYLGSEVLYSCSRNYRLV-GH-PRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRRE 543 (881)
Q Consensus 467 ~C~~p~~~~nG~~~~~~-~~~~~gs~v~y~C~~Gy~L~-G~-~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~ 543 (881)
.|++||.++||.+.... ..|.+|++|+|+|++||.|. |. ..++|+.+|+|+...|.|+. .
T Consensus 2 ~C~~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~l~~G~~~~~~C~~~g~Ws~~~p~C~~-----------------~ 64 (316)
T 2c8i_E 2 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-----------------S 64 (316)
T ss_pred CCCCCCCCCCCccccCCCceecCCCEEEEEcCCCcEeccCCcceEEecCCCcCCCCCccccc-----------------C
Confidence 69999999999986543 34778999999999999985 76 58999999999999999981 2
Q ss_pred ccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcccc
Q psy11954 544 IRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATY 623 (881)
Q Consensus 544 i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (881)
+.|+.|+.+.||.+... ....|
T Consensus 65 ~~C~~pp~~~ng~~~~~----------------------------------------------------------~~~~~ 86 (316)
T 2c8i_E 65 QDCGLPPDVPNAQPALE----------------------------------------------------------GRTSF 86 (316)
T ss_pred CcCCCCCCCCCCEEcCC----------------------------------------------------------CCccc
Confidence 68999888888864211 12468
Q ss_pred cCCCEEEEEcCCCCeec-CC-CceEecCCCceecCCCeeecccCCCCCCCCCceEEec---CCCeecCcEEEEEcCCCce
Q psy11954 624 KIGALVKYRCERGYKVE-GE-PLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT---SNATYYGTAVLYECDENYR 698 (881)
Q Consensus 624 ~~Gs~v~~~C~~GY~l~-G~-~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~---~~~~~~g~~v~y~C~~Gy~ 698 (881)
.+|++|+|+|++||.|. |. ..++|+++|.|+...|.|++ .|+.|+.+.||.+... ...|.+|++|+|+|++||.
T Consensus 87 ~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~G~Ws~~~p~C~~-~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~Gy~ 165 (316)
T 2c8i_E 87 PEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR 165 (316)
T ss_pred CCCCEEEEEeCCCCcccCCCCCeEEECCCCcCCCCCCcccc-CCCCccccccceeecccccCCccCCCCEEEEEcCCCce
Confidence 89999999999999986 75 68999999999998999984 8999999999987542 3345689999999999999
Q ss_pred ecC--CceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc----ccCCCCccCCCeEEE-ccC
Q psy11954 699 LEG--HARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS----LTRPALSCLPGKRFY-YHR 771 (881)
Q Consensus 699 L~G--~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~~~~~~~~~g~~v~~-C~~ 771 (881)
|.| +..++|+++|+|++..|.|+.+ .|+.|+.+ +.....+.+|++++| |++
T Consensus 166 l~g~~~~~~~C~~~g~Ws~~~p~C~~~----------------------~C~~p~~~~nG~~~~~~~~~~g~~~~~~C~~ 223 (316)
T 2c8i_E 166 REPSLSPKLTCLQNLKWSTAVEFCKKK----------------------SCPNPGEIRNGQIDVPGGILFGATISFSCNT 223 (316)
T ss_pred ECCCCCceEEECCCCcCCCCCCceeee----------------------eCcCCCCcCCCEEEcCCCceeCCEEEEEeCC
Confidence 987 6889999999999999999998 79988766 222356789999999 999
Q ss_pred CceeeccccCceeEEEEccCC---eeecCCCccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCeeEe
Q psy11954 772 GIFRLQNTQKVSYTRTCTKRG---TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKC 848 (881)
Q Consensus 772 Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~p~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C 848 (881)
||+|+|+ .+++|+.+| +|++..|+|+.+.|+.|+.+.||.+......+.||++|+|+|++||.|.|+.+++|
T Consensus 224 Gy~l~G~-----~~~~C~~~g~~~~Ws~~~P~C~~i~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~gy~l~G~~~~~C 298 (316)
T 2c8i_E 224 GYKLFGS-----TSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYC 298 (316)
T ss_pred cceECCC-----ccEEEecCCCcccccCCCCccccccCCCCCccCcceEecCCCcccCCCEEEEEcCCCCeEcCCCceEe
Confidence 9999999 999999988 89999999999999999999999987655568899999999999999999999999
Q ss_pred CC---CCeecCCCCceec
Q psy11954 849 ME---DGSWSGDEPRCEK 863 (881)
Q Consensus 849 ~~---~G~Ws~~~P~C~~ 863 (881)
++ +|+|++++|+|++
T Consensus 299 ~~~~~~g~Ws~~~P~C~~ 316 (316)
T 2c8i_E 299 TVNNDEGEWSGPPPECRG 316 (316)
T ss_pred ecCCCCCeECCCCCeeCC
Confidence 96 6999999999973
No 9
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF, virus-receptor complex, antigen, blood group antigen, complement pathway, GPI-anchor; 14.00A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Probab=100.00 E-value=1.5e-47 Score=419.43 Aligned_cols=300 Identities=27% Similarity=0.590 Sum_probs=258.2
Q ss_pred CCCCCCCCcceeeEe--ecccccCCCeEEEECCCCceee-CC-ceeEeC-CCcccCCCCcccccccCCCCCCcceeeeeh
Q psy11954 278 ANCGSPDRHVNTTFV--GTVSTKLGSTISYACPEGNMLV-GS-ATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLVLYLFL 352 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~--~~~~~~~gs~v~y~C~~Gy~l~-G~-~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~~~~~~ 352 (881)
..|+.|+.+.||.+. +...|.+|++|+|+|++||.|+ |. .+++|+ +|.|+...|.|+.
T Consensus 1 ~~C~~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~l~~G~~~~~~C~~~g~Ws~~~p~C~~----------------- 63 (316)
T 2c8i_E 1 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR----------------- 63 (316)
T ss_pred CCCCCCCCCCCCccccCCCceecCCCEEEEEcCCCcEeccCCcceEEecCCCcCCCCCccccc-----------------
Confidence 369999999999865 3457999999999999999985 75 689999 7899999999985
Q ss_pred hhhhhhccccccccCCCCCcCCCceEEecC-CcccCCcEEEEEeCCCcEEe-Cc-ceEEecCCCcccCCCCcccccccCC
Q psy11954 353 SKLFRESYERLNVDCGKLEHIEHGTVTLET-TRTTHGAVAIYACHENYTLI-GE-TRRVCGDGGKWNGTEPQCLFDWCAE 429 (881)
Q Consensus 353 ~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~-~~~~~g~~~~~~C~~Gy~l~-G~-~~~~C~~~G~Ws~~~P~C~~~~C~~ 429 (881)
.+.|+.|+.+.||.+.... ..|.+|++|+|+|++||.|. |. .+++|+.+|+|++..|.|++ .|+.
T Consensus 64 -----------~~~C~~pp~~~ng~~~~~~~~~~~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~G~Ws~~~p~C~~-~C~~ 131 (316)
T 2c8i_E 64 -----------SQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-SCEV 131 (316)
T ss_pred -----------CCcCCCCCCCCCCEEcCCCCcccCCCCEEEEEeCCCCcccCCCCCeEEECCCCcCCCCCCcccc-CCCC
Confidence 1689999999999876543 35789999999999999987 75 68999999999998999984 7998
Q ss_pred CCCcCCCeEEcCCCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcC--CCc
Q psy11954 430 PPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVG--HPR 507 (881)
Q Consensus 430 p~~~~ng~~~~~~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G--~~~ 507 (881)
|+.+.||.+.... .....|.+|++|+|+|++||.|.| ...
T Consensus 132 p~~~~~g~~~~~~--------------------------------------~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~ 173 (316)
T 2c8i_E 132 PTRLNSASLKQPY--------------------------------------ITQNYFPVGTVVEYECRPGYRREPSLSPK 173 (316)
T ss_pred ccccccceeeccc--------------------------------------ccCCccCCCCEEEEEcCCCceECCCCCce
Confidence 8877777542100 012236689999999999999986 678
Q ss_pred eeeccCCcccCCcccccccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecC
Q psy11954 508 RSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGA 587 (881)
Q Consensus 508 ~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 587 (881)
++|+++|+|+...|.|+ ++.|+.|..+.||.+.+.
T Consensus 174 ~~C~~~g~Ws~~~p~C~------------------~~~C~~p~~~~nG~~~~~--------------------------- 208 (316)
T 2c8i_E 174 LTCLQNLKWSTAVEFCK------------------KKSCPNPGEIRNGQIDVP--------------------------- 208 (316)
T ss_pred EEECCCCcCCCCCCcee------------------eeeCcCCCCcCCCEEEcC---------------------------
Confidence 99999999999999999 889999999999976421
Q ss_pred CCCCCcceeeeeecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeeccc
Q psy11954 588 LPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVD 664 (881)
Q Consensus 588 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~ 664 (881)
..|.+|++|+|+|++||+|.|+..++|+.+| +|++..|+|+++.
T Consensus 209 ---------------------------------~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~i~ 255 (316)
T 2c8i_E 209 ---------------------------------GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIY 255 (316)
T ss_pred ---------------------------------CCceeCCEEEEEeCCcceECCCccEEEecCCCcccccCCCCcccccc
Confidence 2467899999999999999999999999888 8999999999999
Q ss_pred CCCCCCCCCceEEecCCCeecCcEEEEEcCCCceecCCceeeecc---CCcccCCCCceee
Q psy11954 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLE---NGTWSSGLPTCKG 722 (881)
Q Consensus 665 C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~---~G~Ws~~~P~C~~ 722 (881)
|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|++ +|+|++++|+|++
T Consensus 256 C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~gy~l~G~~~~~C~~~~~~g~Ws~~~P~C~~ 316 (316)
T 2c8i_E 256 CPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 316 (316)
T ss_pred CCCCCccCcceEecCCCcccCCCEEEEEcCCCCeEcCCCceEeecCCCCCeECCCCCeeCC
Confidence 999999999999875566789999999999999999999999995 6999999999963
No 10
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR, CCP, immune system; NMR {Rattus norvegicus}
Probab=100.00 E-value=3.2e-47 Score=417.54 Aligned_cols=295 Identities=26% Similarity=0.642 Sum_probs=255.4
Q ss_pred CCCCCCCCcceeeEeec---ccccCCCeEEEECCCCceeeCCceeEeC-CCcccCCCCcccccccCCCCCCcceeeeehh
Q psy11954 278 ANCGSPDRHVNTTFVGT---VSTKLGSTISYACPEGNMLVGSATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLVLYLFLS 353 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~---~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~~~~~~~ 353 (881)
..|..|+.+.|+..... ..|.+|++|+|+|++|| +.+..+++|+ +|.|+...|.|++
T Consensus 3 ~~C~~Pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~~------------------ 63 (320)
T 1ntj_A 3 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCIR------------------ 63 (320)
T ss_pred CcCcCCCcCCcceeccccccccCCCCCEEEEEcCCCC-CCCCCeEEECCCCEECCCCCcccc------------------
Confidence 57999999999987632 36999999999999999 5677889999 9999988899998
Q ss_pred hhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecCCC---cccCCCCcccccccCCC
Q psy11954 354 KLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGG---KWNGTEPQCLFDWCAEP 430 (881)
Q Consensus 354 ~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G---~Ws~~~P~C~~~~C~~p 430 (881)
+.|+.|+.+.||.+... ..+.+|++|+|+|++||.|.|...++|+.+| +|++..|.|+++.|+.|
T Consensus 64 -----------~~C~~p~~~~nG~~~~~-~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~P~C~~~~C~~p 131 (320)
T 1ntj_A 64 -----------KQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIP 131 (320)
T ss_pred -----------ccCcCCCCCCCCEEECC-CCcccCCEEEEEcCCCCEECCCCceEEEeCCCCeeeCCCCCcCcCCCCCCC
Confidence 89999999999998764 3578999999999999999999999999987 89999999999899988
Q ss_pred CCcCCCeEEcCCCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCC------cEEcC
Q psy11954 431 PQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRN------YRLVG 504 (881)
Q Consensus 431 ~~~~ng~~~~~~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~G------y~L~G 504 (881)
+.+.||.+... ....|.+|++|+|+|++| |.|.|
T Consensus 132 ~~~~nG~~~~~----------------------------------------~~~~~~~g~~v~y~C~~G~~~~~~y~l~G 171 (320)
T 1ntj_A 132 PSIPNGDFFSP----------------------------------------NREDFHYGMVVTYQCNTDARGKKLFNLVG 171 (320)
T ss_pred CCCCCCcEecC----------------------------------------CCCccccCCEEEEECCCCCCCcceEEEeC
Confidence 87777754321 113467899999999999 99999
Q ss_pred CCceeeccC----CcccCCcccccccccccceecccccccccc-ccCCCCCCCCCeeEEEeccccccCceEEEecCCCCc
Q psy11954 505 HPRRSCLES----KVWSDTAPKCEGKATKDIKVCSNVAVDRRE-IRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASS 579 (881)
Q Consensus 505 ~~~~tC~~~----G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~-i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~ 579 (881)
...++|+++ |+|++++|+|+ . +.|+.| .+.||.+..
T Consensus 172 ~~~~~C~~~~~~~G~Ws~~~P~C~------------------~~~~C~~p-~~~ng~~~~-------------------- 212 (320)
T 1ntj_A 172 EPSIHCTSIDGQVGVWSGPPPQCI------------------ELNKCTPP-HVENAVIVS-------------------- 212 (320)
T ss_pred CCceEEecCCCCCCEECCCCcccc------------------ccCCCCCC-CCCCCeEeC--------------------
Confidence 999999987 99999999998 4 689875 556776421
Q ss_pred cceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCe
Q psy11954 580 VATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPE 659 (881)
Q Consensus 580 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~ 659 (881)
.....|.+|++|+|+|++||.|.|+..++|+++|+|+++.|+
T Consensus 213 --------------------------------------~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~ 254 (320)
T 1ntj_A 213 --------------------------------------KNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPS 254 (320)
T ss_pred --------------------------------------CCCCcccCCCEEEEECCCCCeECCCCCcEECCCCeECCCCCe
Confidence 012468899999999999999999999999999999999999
Q ss_pred eecc-cCCCCC-CCCCceEEecCCCeecCcEEEEEcCCCceecCCceeeeccCCc---ccCCCCcee
Q psy11954 660 CIYV-DCGNPE-TVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT---WSSGLPTCK 721 (881)
Q Consensus 660 C~~v-~C~~p~-~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~---Ws~~~P~C~ 721 (881)
|+++ .|+.|+ .+.||.+.. ...+.+|++|+|+|++||+|.|+..++|+++|+ |++++|+|+
T Consensus 255 C~~~~~C~~p~~~~~ng~~~~-~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~ 320 (320)
T 1ntj_A 255 CFKVKSCGAFLGELPNGHVFV-PQNLQLGAKVTFVCNTGYQLKGNSSSHCVLDGVESIWNSSVPVCE 320 (320)
T ss_pred eEcccccCCCCCCCCCCeEec-CCCcccCCEEEEEcCCCCEECCCCcCEeeCCCCcCccCCCCCccC
Confidence 9986 798874 789999875 345779999999999999999999999999999 999999995
No 11
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=100.00 E-value=3.9e-47 Score=415.66 Aligned_cols=289 Identities=22% Similarity=0.525 Sum_probs=252.0
Q ss_pred ecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcC-CCceeeccCCcccCCcccccccccccceeccccccccccc
Q psy11954 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVG-HPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREI 544 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G-~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i 544 (881)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.| ...++|+++|+|+...|.|+ ++
T Consensus 2 ~~C~~P~~~~ng~~~~~~~~y~~g~~~~y~C~~Gy~l~g~~~~~~C~~~G~Ws~~~p~C~------------------~~ 63 (319)
T 1qub_A 2 RTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCT------------------PR 63 (319)
T ss_dssp CSEECCCCCTTEEEESCCSEECTTCEEEEEECTTEEETTSCEEEECCTTSCCCCCCCCEE------------------EC
T ss_pred CcCcCCCCCCCCEEecCCCcccCCCEEEEEECCCCeEcCCCceEEECCCCEECCCCCeEC------------------cc
Confidence 579999999999998766778899999999999999996 56889999999999999999 78
Q ss_pred cCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCccccc
Q psy11954 545 RCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK 624 (881)
Q Consensus 545 ~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (881)
.|+.|..+.||.+.. ..|.
T Consensus 64 ~C~~p~~~~nG~~~~-------------------------------------------------------------~~~~ 82 (319)
T 1qub_A 64 VCPFAGILENGAVRY-------------------------------------------------------------TTFE 82 (319)
T ss_dssp BCCCCCCCTTEEEEC-------------------------------------------------------------SCSB
T ss_pred CCcCCCCCCCccEec-------------------------------------------------------------CCcc
Confidence 999999999997631 2467
Q ss_pred CCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEec----CCCeecCcEEEEEcCCCceec
Q psy11954 625 IGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT----SNATYYGTAVLYECDENYRLE 700 (881)
Q Consensus 625 ~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~----~~~~~~g~~v~y~C~~Gy~L~ 700 (881)
+|++|+|+|++||.|.|+..++|+.+|+|+++.|.|+++.|+.|+.+.||.+... ...+.+|++|+|+|++||.|.
T Consensus 83 ~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~~g~~~~~~~~~~~~~~~g~~v~y~C~~Gy~l~ 162 (319)
T 1qub_A 83 YPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMF 162 (319)
T ss_dssp TTCEEEEEECTTEEEESCSEEEECTTSCEESCCCEEEECEECCCCCCTTEEEEECCCSBTTBEETTCEEEEEECTTEEEE
T ss_pred cCCEEEEECCCCceeCCCCceEECCCCeECCCCCCCccCcCCCCCCCCCceEEecccCCCCceecCCEEEEEeCCCceec
Confidence 8999999999999999999999999999999999999999999999999998863 345789999999999999999
Q ss_pred CCceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc----c--cCCCCccCCCeEEE-ccCCc
Q psy11954 701 GHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS----L--TRPALSCLPGKRFY-YHRGI 773 (881)
Q Consensus 701 G~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~--~~~~~~~~g~~v~~-C~~Gy 773 (881)
|+..++|+++|+|++ +|+|+.+ .|+.|+.+ . .....|.+|++|+| |+.||
T Consensus 163 G~~~~~C~~~G~Ws~-~P~C~~v----------------------~C~~p~~~~nG~~~~~~~~~~~~g~~v~~~C~~Gy 219 (319)
T 1qub_A 163 GNDTITCTTHGNWTK-LPECREV----------------------KCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGY 219 (319)
T ss_dssp SCSEEEBCTTSSBSC-CCEEEEC----------------------EECCCCCCTTEEEECCSCSSEETTCEEEEEECTTE
T ss_pred CCCeEEECCCCeECC-CCceecc----------------------CCCCCCCCCCCeEecCCCCccccCCEEEEEcCCCC
Confidence 999999999999997 8999998 79888765 1 12356889999999 99999
Q ss_pred eeeccccCceeEEEEccCCeeecCCCccccccCCCCCC----CCCceEEEc----cCcccCCCEEEEEcCCCCEEcCC-C
Q psy11954 774 FRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGS----IDNGRVIIM----NQTTTYNSAVEYHCVPQYQRIGP-Y 844 (881)
Q Consensus 774 ~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~----~~nG~~~~~----~~~~~~g~~v~f~C~~Gy~l~G~-~ 844 (881)
+|.|+ .+++|+++|+|+. .|+|+. .|+.|.. +.||..... ...+.+|++|+|+|++||.+.|. .
T Consensus 220 ~l~G~-----~~~~C~~~G~Ws~-~P~C~~-~C~~p~~~~~~~~~g~~~~~~~~~~~~~~~g~~v~f~C~~g~~~~~~~~ 292 (319)
T 1qub_A 220 SLDGP-----EEIECTKLGNWSA-MPSCKA-SCKVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYTE 292 (319)
T ss_dssp EESSC-----SEEEBCTTSSBSC-CCCEEE-CBCCSSSSCEEESSSSEEEHHHHTTTCBCTTCEEEEEEEETTTTEEEEE
T ss_pred EECCC-----CCeEECCCCcCCC-CCCccC-cCCCCccccccccCCceeeccccccCcccCCCEEEEEeCCCCccccCCc
Confidence 99999 8999999999998 899987 6998853 456765431 23467899999999999998874 6
Q ss_pred eeEeCCCCeecCCCCceeccCC
Q psy11954 845 LRKCMEDGSWSGDEPRCEKRFN 866 (881)
Q Consensus 845 ~~~C~~~G~Ws~~~P~C~~~~~ 866 (881)
.++|+ ||+|+ +|+|.+...
T Consensus 293 ~~~C~-~G~w~--~P~C~~~~~ 311 (319)
T 1qub_A 293 DAQCI-DGTIE--VPKCFKEHT 311 (319)
T ss_dssp EEECB-TTBCC--CCTTCCCCC
T ss_pred CCEec-CCcCc--CCcccCCCC
Confidence 89998 89995 799986643
No 12
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat, sushi, complement control protein, N glycosylation, multi-domain, membrane adhesion; HET: NAG MAN; 2.70A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Probab=100.00 E-value=2.1e-46 Score=409.86 Aligned_cols=294 Identities=25% Similarity=0.482 Sum_probs=252.7
Q ss_pred ccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeC-cceEEecCCCcccCCCCcccccccCCCCCcCCCeEEcCCC
Q psy11954 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIG-ETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGR 443 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G-~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ng~~~~~~~ 443 (881)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.| ...++|+.+|+|++..|.|+++.|+.|+.+.||.+..
T Consensus 2 ~~C~~P~~~~ng~~~~~~~~y~~g~~~~y~C~~Gy~l~g~~~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~~~--- 78 (319)
T 1qub_A 2 RTCPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRY--- 78 (319)
T ss_dssp CSEECCCCCTTEEEESCCSEECTTCEEEEEECTTEEETTSCEEEECCTTSCCCCCCCCEEECBCCCCCCCTTEEEEC---
T ss_pred CcCcCCCCCCCCEEecCCCcccCCCEEEEEECCCCeEcCCCceEEECCCCEECCCCCeECccCCcCCCCCCCccEec---
Confidence 579999999999988766678999999999999999996 6688999999999989999999999888777776532
Q ss_pred CCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccc
Q psy11954 444 RTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKC 523 (881)
Q Consensus 444 ~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C 523 (881)
..+.+|++|+|+|++||.|.|+..++|+++|+|++++|.|
T Consensus 79 ----------------------------------------~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C 118 (319)
T 1qub_A 79 ----------------------------------------TTFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVC 118 (319)
T ss_dssp ----------------------------------------SCSBTTCEEEEEECTTEEEESCSEEEECTTSCEESCCCEE
T ss_pred ----------------------------------------CCcccCCEEEEECCCCceeCCCCceEECCCCeECCCCCCC
Confidence 1256799999999999999999999999999999999999
Q ss_pred cccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCC
Q psy11954 524 EGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGND 603 (881)
Q Consensus 524 ~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 603 (881)
+ .+.|+.|..+.||.+....
T Consensus 119 ~------------------~~~C~~p~~~~~g~~~~~~------------------------------------------ 138 (319)
T 1qub_A 119 A------------------PIICPPPSIPTFATLRVYK------------------------------------------ 138 (319)
T ss_dssp E------------------ECEECCCCCCTTEEEEECC------------------------------------------
T ss_pred c------------------cCcCCCCCCCCCceEEecc------------------------------------------
Confidence 9 7899999999999865321
Q ss_pred ccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEecC-CC
Q psy11954 604 RLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTS-NA 682 (881)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~-~~ 682 (881)
......|.+|++|+|+|++||.|.|+..++|+++|+|+. .|+|+++.|+.|+.+.||.++... ..
T Consensus 139 -------------~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~~v~C~~p~~~~nG~~~~~~~~~ 204 (319)
T 1qub_A 139 -------------PSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNWTK-LPECREVKCPFPSRPDNGFVNYPAKPT 204 (319)
T ss_dssp -------------CSBTTBEETTCEEEEEECTTEEEESCSEEEBCTTSSBSC-CCEEEECEECCCCCCTTEEEECCSCSS
T ss_pred -------------cCCCCceecCCEEEEEeCCCceecCCCeEEECCCCeECC-CCceeccCCCCCCCCCCCeEecCCCCc
Confidence 001245788999999999999999999999999999997 899999999999999999998643 45
Q ss_pred eecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc---c-----
Q psy11954 683 TYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS---L----- 754 (881)
Q Consensus 683 ~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~----- 754 (881)
+.+|++|+|+|++||+|.|+..++|+++|+|++ +|+|++. |..|... .
T Consensus 205 ~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~-~P~C~~~-----------------------C~~p~~~~~~~~~g~~ 260 (319)
T 1qub_A 205 LYYKDKATFGCHDGYSLDGPEEIECTKLGNWSA-MPSCKAS-----------------------CKVPVKKATVVYQGER 260 (319)
T ss_dssp EETTCEEEEEECTTEEESSCSEEEBCTTSSBSC-CCCEEEC-----------------------BCCSSSSCEEESSSSE
T ss_pred cccCCEEEEEcCCCCEECCCCCeEECCCCcCCC-CCCccCc-----------------------CCCCccccccccCCce
Confidence 789999999999999999999999999999997 8999976 7766432 0
Q ss_pred -----cCCCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccccC
Q psy11954 755 -----TRPALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDC 806 (881)
Q Consensus 755 -----~~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C 806 (881)
.....+.+|+.++| |+.||.+.|. ...++|+ +|+|+ .|+|.....
T Consensus 261 ~~~~~~~~~~~~~g~~v~f~C~~g~~~~~~----~~~~~C~-~G~w~--~P~C~~~~~ 311 (319)
T 1qub_A 261 VKIQEKFKNGMLHGDKVSFFCKNKEKKCSY----TEDAQCI-DGTIE--VPKCFKEHT 311 (319)
T ss_dssp EEHHHHTTTCBCTTCEEEEEEEETTTTEEE----EEEEECB-TTBCC--CCTTCCCCC
T ss_pred eeccccccCcccCCCEEEEEeCCCCccccC----CcCCEec-CCcCc--CCcccCCCC
Confidence 12356789999999 9999998875 1689998 89995 899986543
No 13
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=100.00 E-value=5e-46 Score=439.01 Aligned_cols=294 Identities=25% Similarity=0.568 Sum_probs=259.8
Q ss_pred cCCCCCCCCCCceeec--cCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceeccccccccccc
Q psy11954 467 DCGRLTAIPYGSISYL--NETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREI 544 (881)
Q Consensus 467 ~C~~p~~~~nG~~~~~--~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i 544 (881)
.|++|+.++||.+... ...|.+|++|+|+|++|| +.|...++|+++|+|++..|.|+ ++
T Consensus 2 ~C~~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~------------------~~ 62 (551)
T 1ntl_A 2 HCPAPSQLPSAKPINLTDESMFPIGTYLLYECLPGY-IKRQFSITCKQDSTWTSAEDKCI------------------RK 62 (551)
T ss_pred CCcCCCCCCcceeccccCCCCccCCCEEEEEeCCCC-cCCCceEEECCCCeECCCCCCcc------------------cC
Confidence 5999999999987543 345889999999999999 56777899999999999899999 78
Q ss_pred cCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCccccc
Q psy11954 545 RCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK 624 (881)
Q Consensus 545 ~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (881)
.|+.|..+.||.+... ..|.
T Consensus 63 ~C~~p~~~~ng~~~~~------------------------------------------------------------~~~~ 82 (551)
T 1ntl_A 63 QCKTPSDPENGLVHVH------------------------------------------------------------TGIE 82 (551)
T ss_pred CCcCCCCCCCcEEEcC------------------------------------------------------------CCcc
Confidence 9999999999875321 2467
Q ss_pred CCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecccCCCCCCCCCceEEec-CCCeecCcEEEEEcCCC----
Q psy11954 625 IGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVDCGNPETVPNGGFTLT-SNATYYGTAVLYECDEN---- 696 (881)
Q Consensus 625 ~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~C~~p~~~~nG~~~~~-~~~~~~g~~v~y~C~~G---- 696 (881)
+|++|+|+|++||+|.|+..++|+.+| .|++..|.|+++.|+.|+.+.||.+... ...+.+|++|+|+|++|
T Consensus 83 ~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~G~~~~ 162 (551)
T 1ntl_A 83 FGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGK 162 (551)
T ss_pred cCCEEEEECCCCCEECCCccEEEEeCCCcceeCCCCCCCCCCCCCCCCcCCCCcEecCCCCccccCCEEEEEeCCCCCcc
Confidence 899999999999999999999999988 8999999999999999999999998764 34567999999999999
Q ss_pred --ceecCCceeeeccC----CcccCCCCceee-cccCceeeeecCCeecCCCCcccCCCCCCcc----cc--CCCCccCC
Q psy11954 697 --YRLEGHARRLCLEN----GTWSSGLPTCKG-NEGHARRLCLENGTWSSGLPTCKGCKTPKKS----LT--RPALSCLP 763 (881)
Q Consensus 697 --y~L~G~~~~~C~~~----G~Ws~~~P~C~~-~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~~--~~~~~~~g 763 (881)
|.|.|+..++|+.+ |+|++++|+|+. + .|+.|+.+ .. ....|.+|
T Consensus 163 ~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~----------------------~C~~p~~~~ng~~~~~~~~~~~~g 220 (551)
T 1ntl_A 163 ALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIELN----------------------KCTPPPYVENAVMLSENRSLFSLR 220 (551)
T ss_pred ceeEecCCcceEeeCCCCcCCEECCCCCcccCcc----------------------ccCCCCCCCCceEeCCCCCcccCC
Confidence 99999999999987 999999999996 5 69987665 11 23468899
Q ss_pred CeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccc-cCCCCCCCCCceEE-EccCcccCCCEEEEEcCCCCEE
Q psy11954 764 GKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAI-DCSHPGSIDNGRVI-IMNQTTTYNSAVEYHCVPQYQR 840 (881)
Q Consensus 764 ~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v-~C~~p~~~~nG~~~-~~~~~~~~g~~v~f~C~~Gy~l 840 (881)
+.|+| |+.||.|.|+ ..++|+++|+|++..|+|+.+ .|+.|+.+.||.++ .....+.||++|+|+|++||.|
T Consensus 221 ~~v~~~C~~Gy~l~G~-----~~~~C~~~g~Ws~~~P~C~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~Gy~l 295 (551)
T 1ntl_A 221 DIVEFRCHPGFIMKGA-----SSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTL 295 (551)
T ss_pred CEEEEECCCCCEEcCC-----CCeEECCCCeECCCCccccccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCCcEe
Confidence 99999 9999999999 899999999999999999988 89999999999886 3344588999999999999999
Q ss_pred cCCCeeEeCCCCeecCCCCceeccCC
Q psy11954 841 IGPYLRKCMEDGSWSGDEPRCEKRFN 866 (881)
Q Consensus 841 ~G~~~~~C~~~G~Ws~~~P~C~~~~~ 866 (881)
.|+..++|+++|+|++.+|+|+...+
T Consensus 296 ~G~~~~~C~~~g~W~~~~p~C~~~~~ 321 (551)
T 1ntl_A 296 EGSSQSQCQSDGSWNPLLAKCVSRLA 321 (551)
T ss_pred cCCcceEEeCCCeECCCCCeeeeecc
Confidence 99999999999999999999998654
No 14
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=100.00 E-value=6e-45 Score=429.83 Aligned_cols=298 Identities=27% Similarity=0.621 Sum_probs=261.9
Q ss_pred CCCCCCCcceeeEee---cccccCCCeEEEECCCCceeeCCceeEeC-CCcccCCCCcccccccCCCCCCcceeeeehhh
Q psy11954 279 NCGSPDRHVNTTFVG---TVSTKLGSTISYACPEGNMLVGSATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSK 354 (881)
Q Consensus 279 ~C~~p~~~~ng~~~~---~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~~~~~~~~ 354 (881)
.|..|+.+.|+.+.. ...|.+|++|+|+|++|| +.+..+++|+ +|.|++..|.|+.
T Consensus 2 ~C~~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~~------------------- 61 (551)
T 1ntl_A 2 HCPAPSQLPSAKPINLTDESMFPIGTYLLYECLPGY-IKRQFSITCKQDSTWTSAEDKCIR------------------- 61 (551)
T ss_pred CCcCCCCCCcceeccccCCCCccCCCEEEEEeCCCC-cCCCceEEECCCCeECCCCCCccc-------------------
Confidence 699999999998653 246999999999999999 4677889999 9999998999998
Q ss_pred hhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecCCC---cccCCCCcccccccCCCC
Q psy11954 355 LFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGG---KWNGTEPQCLFDWCAEPP 431 (881)
Q Consensus 355 ~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G---~Ws~~~P~C~~~~C~~p~ 431 (881)
+.|+.|+.+.||.+.... .|.+|++|+|+|++||.|.|...++|+.+| +|++..|.|+++.|+.|+
T Consensus 62 ----------~~C~~p~~~~ng~~~~~~-~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~ 130 (551)
T 1ntl_A 62 ----------KQCKTPSDPENGLVHVHT-GIEFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPICEWIPCEIPP 130 (551)
T ss_pred ----------CCCcCCCCCCCcEEEcCC-CcccCCEEEEECCCCCEECCCccEEEEeCCCcceeCCCCCCCCCCCCCCCC
Confidence 899999999999987643 578999999999999999999999999998 899999999999999888
Q ss_pred CcCCCeEEcCCCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCC------cEEcCC
Q psy11954 432 QISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRN------YRLVGH 505 (881)
Q Consensus 432 ~~~ng~~~~~~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~G------y~L~G~ 505 (881)
.+.||.+... ....|.+|++|+|+|++| |.|.|+
T Consensus 131 ~~~nG~~~~~----------------------------------------~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~ 170 (551)
T 1ntl_A 131 GIPNGDFFSS----------------------------------------TREDFHYGMVVTYRCNTDARGKALFNLVGE 170 (551)
T ss_pred cCCCCcEecC----------------------------------------CCCccccCCEEEEEeCCCCCccceeEecCC
Confidence 8877765321 013467899999999999 999999
Q ss_pred CceeeccC----CcccCCcccccccccccceecccccccccc-ccCCCCCCCCCeeEEEeccccccCceEEEecCCCCcc
Q psy11954 506 PRRSCLES----KVWSDTAPKCEGKATKDIKVCSNVAVDRRE-IRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSV 580 (881)
Q Consensus 506 ~~~tC~~~----G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~-i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~ 580 (881)
..++|+.+ |+|++++|.|+ . +.|+.|+.+.||.+...
T Consensus 171 ~~~~C~~~~~~~G~Ws~~~P~C~------------------~~~~C~~p~~~~ng~~~~~-------------------- 212 (551)
T 1ntl_A 171 PSLYCTSNDGEIGVWSGPPPQCI------------------ELNKCTPPPYVENAVMLSE-------------------- 212 (551)
T ss_pred cceEeeCCCCcCCEECCCCCccc------------------CccccCCCCCCCCceEeCC--------------------
Confidence 99999987 99999999999 4 68999999999875311
Q ss_pred ceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCee
Q psy11954 581 ATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPEC 660 (881)
Q Consensus 581 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C 660 (881)
....|.+|++|+|+|++||.|.|+..++|+.+|+|++..|+|
T Consensus 213 --------------------------------------~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C 254 (551)
T 1ntl_A 213 --------------------------------------NRSLFSLRDIVEFRCHPGFIMKGASSVHCQSLNKWEPELPSC 254 (551)
T ss_pred --------------------------------------CCCcccCCCEEEEECCCCCEEcCCCCeEECCCCeECCCCccc
Confidence 124688999999999999999999999999999999999999
Q ss_pred ecc-cCCCCCCCCCceEEe-cCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec
Q psy11954 661 IYV-DCGNPETVPNGGFTL-TSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN 723 (881)
Q Consensus 661 ~~v-~C~~p~~~~nG~~~~-~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~ 723 (881)
+++ .|+.|+.+.||.+.. ....|.+|++|+|+|++||.|.|+..++|+.+|+|++..|+|..+
T Consensus 255 ~~~~~C~~p~~~~~g~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~g~W~~~~p~C~~~ 319 (551)
T 1ntl_A 255 FKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTLEGSSQSQCQSDGSWNPLLAKCVSR 319 (551)
T ss_pred cccccCCCCCcCCCCccccCCCCCcccCCEEEEEcCCCcEecCCcceEEeCCCeECCCCCeeeee
Confidence 998 899999999998873 334578999999999999999999999999999999999999876
No 15
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=100.00 E-value=4.4e-41 Score=355.74 Aligned_cols=217 Identities=24% Similarity=0.485 Sum_probs=196.2
Q ss_pred cccccCCCEEEEEcCCCCeecCC--CceEecCCCceec-CCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCC
Q psy11954 620 VATYKIGALVKYRCERGYKVEGE--PLSTCEDTGSWSG-SVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDEN 696 (881)
Q Consensus 620 ~~~~~~Gs~v~~~C~~GY~l~G~--~~~tC~~~G~Ws~-~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~G 696 (881)
+..|.+|++|+|+|++||.|.|+ ..++|+++|+|++ ..|.|+++.|+.|+.+.||.+......+.+|++|+|+|++|
T Consensus 17 ~~~y~~g~~~~y~C~~Gy~~~g~~~~~~~C~~~g~Ws~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~~~~~C~~G 96 (252)
T 3o8e_B 17 KPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEG 96 (252)
T ss_dssp CSSCCTTCEEEEEECTTEEECSSSCCEEEBCTTSSBCCCCSTTEEECBCCCCCCCTTEEEEETTSSSBTTCEEEEEECTT
T ss_pred CCcCCCCCEEEEEcCCCccCCCCCCCeEEECCCCcCCCCCCCceeeeECcCCCCCCCcEEeecCCCccCCCEEEEECCCC
Confidence 35799999999999999999974 7999999999998 58999999999999999999988666678999999999999
Q ss_pred ceecCCceeeeccCC---cccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc---c---cCCCCccCCCeEE
Q psy11954 697 YRLEGHARRLCLENG---TWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS---L---TRPALSCLPGKRF 767 (881)
Q Consensus 697 y~L~G~~~~~C~~~G---~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~---~~~~~~~~g~~v~ 767 (881)
|+|.|+..++|+++| +|++..|+|+.+ .|+.|+.+ . .....|.+|++++
T Consensus 97 y~l~G~~~~~C~~~G~~~~Ws~~~P~C~~~----------------------~C~~p~~~~nG~~~~~~~~~~~~g~~v~ 154 (252)
T 3o8e_B 97 YYLIGEEILYCELKGSVAIWSGKPPICEKV----------------------LCTPPPKIKNGKHTFSEVEVFEYLDAVT 154 (252)
T ss_dssp EEEESCSEEEEEESSSCEEESSCCCEEEEC----------------------EECCCCCCTTEEESSTTCCCEETTCEEE
T ss_pred CeECCCCEEEEeCCCCCCeeCCCCCeEeee----------------------EcCCCCCCCCCcEeccCCceecCCCEEE
Confidence 999999999999988 899999999998 69887765 1 1245688999999
Q ss_pred E-ccC-----CceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCceEEEc-cCcccCCCEEEEEcCCCCEE
Q psy11954 768 Y-YHR-----GIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIM-NQTTTYNSAVEYHCVPQYQR 840 (881)
Q Consensus 768 ~-C~~-----Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~~~~~-~~~~~~g~~v~f~C~~Gy~l 840 (881)
| |+. ||.|.|+ .+++|+++|+|++..|+|+++.|+.| .+.||.++.. ...+.||++|+|+|++||.|
T Consensus 155 y~C~~g~~~~gy~l~G~-----~~~~C~~~G~Ws~~~P~C~~v~C~~P-~~~ng~~~~~~~~~~~~g~~v~f~C~~Gy~l 228 (252)
T 3o8e_B 155 YSCDPAPGPDPFSLIGE-----STIYCGDNSVWSRAAPECKVVKCRFP-VVENGKQISGFGKKFYYKATVMFECDKGFYL 228 (252)
T ss_dssp EEECCCSSSSCCEEESC-----SEEEBCTTSSBSSCCCEEECCCBCCC-CCTTEEEEECCCSCBCTTCEEEEEECTTEEE
T ss_pred EEeCCCCCCCCeEEeCC-----CceEECCCCeECCCCCEEeeeecCCC-cccCCcEecCCCCccccCCEEEEEeCCCCEE
Confidence 9 998 8999999 89999999999999999999999987 6899987653 34588999999999999999
Q ss_pred cCCCeeEeCCCCeecCCCCceecc
Q psy11954 841 IGPYLRKCMEDGSWSGDEPRCEKR 864 (881)
Q Consensus 841 ~G~~~~~C~~~G~Ws~~~P~C~~~ 864 (881)
.|+.+++|++||+|++.+|+|+++
T Consensus 229 ~G~~~~~C~~~g~Ws~~~P~C~~v 252 (252)
T 3o8e_B 229 DGSDTIVCDSNSTWDPPVPKCLKV 252 (252)
T ss_dssp ESCSEEEECTTSCEESCCCEEEEC
T ss_pred cCCCcEEECCCCeECCCCCeeeeC
Confidence 999999999999999999999874
No 16
>3o8e_B Membrane cofactor protein; short consensus repeat, complement control protein, fiber KN virus-receptor interaction, cell adhesion-immunity complex; HET: NAG; 2.84A {Homo sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Probab=100.00 E-value=8e-41 Score=353.76 Aligned_cols=239 Identities=26% Similarity=0.543 Sum_probs=208.9
Q ss_pred CCCCCcCCCceEEec-CCcccCCcEEEEEeCCCcEEeCc--ceEEecCCCcccC-CCCcccccccCCCCCcCCCeEEcCC
Q psy11954 367 CGKLEHIEHGTVTLE-TTRTTHGAVAIYACHENYTLIGE--TRRVCGDGGKWNG-TEPQCLFDWCAEPPQISGGIVTTSG 442 (881)
Q Consensus 367 C~~~~~~~nG~~~~~-~~~~~~g~~~~~~C~~Gy~l~G~--~~~~C~~~G~Ws~-~~P~C~~~~C~~p~~~~ng~~~~~~ 442 (881)
|+.||.+.|+.+... ...|.+|++|+|+|++||.|.|. .+++|+++|+|++ ..|.|+++.|+.|+.+.||.+.
T Consensus 1 C~~PP~~~~~~~~~~~~~~y~~g~~~~y~C~~Gy~~~g~~~~~~~C~~~g~Ws~~~~p~C~~~~C~~p~~~~nG~~~--- 77 (252)
T 3o8e_B 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPLNGQAV--- 77 (252)
T ss_dssp CCSCCCCSSEEESSCCCSSCCTTCEEEEEECTTEEECSSSCCEEEBCTTSSBCCCCSTTEEECBCCCCCCCTTEEEE---
T ss_pred CCCCCCCCcccCcCCcCCcCCCCCEEEEEcCCCccCCCCCCCeEEECCCCcCCCCCCCceeeeECcCCCCCCCcEEe---
Confidence 778999999987653 44689999999999999999974 7899999999998 5999999899888777776653
Q ss_pred CCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeeccCC---cccCC
Q psy11954 443 RRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDT 519 (881)
Q Consensus 443 ~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G---~Ws~~ 519 (881)
.....|.+|++|+|+|++||.|.|+..++|+.+| +|+..
T Consensus 78 --------------------------------------~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~ 119 (252)
T 3o8e_B 78 --------------------------------------PANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGK 119 (252)
T ss_dssp --------------------------------------ETTSSSBTTCEEEEEECTTEEEESCSEEEEEESSSCEEESSC
T ss_pred --------------------------------------ecCCCccCCCEEEEECCCCCeECCCCEEEEeCCCCCCeeCCC
Confidence 2234477899999999999999999999999988 89999
Q ss_pred cccccccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeee
Q psy11954 520 APKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSV 599 (881)
Q Consensus 520 ~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 599 (881)
.|.|+ ++.|+.|+.+.||.+...
T Consensus 120 ~P~C~------------------~~~C~~p~~~~nG~~~~~--------------------------------------- 142 (252)
T 3o8e_B 120 PPICE------------------KVLCTPPPKIKNGKHTFS--------------------------------------- 142 (252)
T ss_dssp CCEEE------------------ECEECCCCCCTTEEESST---------------------------------------
T ss_pred CCeEe------------------eeEcCCCCCCCCCcEecc---------------------------------------
Confidence 99999 789999999999975311
Q ss_pred ecCCccccceeeeccCCCCCcccccCCCEEEEEcCC-----CCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCc
Q psy11954 600 TGNDRLYGRTLIKTADSASSVATYKIGALVKYRCER-----GYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNG 674 (881)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~-----GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG 674 (881)
....|.+|++|+|+|+. ||.|.|+..++|+++|+|++..|+|+++.|+.| .+.||
T Consensus 143 -------------------~~~~~~~g~~v~y~C~~g~~~~gy~l~G~~~~~C~~~G~Ws~~~P~C~~v~C~~P-~~~ng 202 (252)
T 3o8e_B 143 -------------------EVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFP-VVENG 202 (252)
T ss_dssp -------------------TCCCEETTCEEEEEECCCSSSSCCEEESCSEEEBCTTSSBSSCCCEEECCCBCCC-CCTTE
T ss_pred -------------------CCceecCCCEEEEEeCCCCCCCCeEEeCCCceEECCCCeECCCCCEEeeeecCCC-cccCC
Confidence 12468899999999998 899999999999999999999999999999977 58999
Q ss_pred eEEec-CCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec
Q psy11954 675 GFTLT-SNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN 723 (881)
Q Consensus 675 ~~~~~-~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~ 723 (881)
.+... ...|.+|++|+|+|++||.|.|+.+++|+++|+|++++|+|+++
T Consensus 203 ~~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~~v 252 (252)
T 3o8e_B 203 KQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCLKV 252 (252)
T ss_dssp EEEECCCSCBCTTCEEEEEECTTEEEESCSEEEECTTSCEESCCCEEEEC
T ss_pred cEecCCCCccccCCEEEEEeCCCCEEcCCCcEEECCCCeECCCCCeeeeC
Confidence 87653 35678999999999999999999999999999999999999864
No 17
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=100.00 E-value=2.6e-40 Score=354.23 Aligned_cols=245 Identities=24% Similarity=0.513 Sum_probs=202.4
Q ss_pred eecCCCCCCCCCCceee---ccCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCccc--ccccccccceecccccc
Q psy11954 465 NIDCGRLTAIPYGSISY---LNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPK--CEGKATKDIKVCSNVAV 539 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~---~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~--C~~~~~~~~~~~~~~~~ 539 (881)
...|++||.+.|+.+.. ....|.+|++|+|+|++||.|.|...++|+ +|+|+...|+ |+
T Consensus 5 ~~~C~~pp~~~n~~i~~g~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~~~P~~~C~--------------- 68 (277)
T 2wii_C 5 AEDCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCR-KGEWVALNPLRKCQ--------------- 68 (277)
T ss_dssp ---CCSCCCCCSSEEECSCCCCSSCCTTCEEEEEECTTEECSSCEEEEEC-SSSEEESCSSCCCE---------------
T ss_pred cccCcCCCCCccccccccccccCCcCCCCEEEEEcCCCCcCCCCceEEcC-CCeeeCCCCCcccc---------------
Confidence 35799999999987754 235688999999999999999999999997 8999987665 87
Q ss_pred ccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCC
Q psy11954 540 DRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASS 619 (881)
Q Consensus 540 ~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (881)
.+.|+.|..+.||.+....
T Consensus 69 ---~~~C~~p~~~~nG~~~~~~---------------------------------------------------------- 87 (277)
T 2wii_C 69 ---KRPCGHPGDTPFGTFTLTG---------------------------------------------------------- 87 (277)
T ss_dssp ---ECBCCCCCCCTTEEEEEES----------------------------------------------------------
T ss_pred ---ccCCcCCCCCCCCEEEecC----------------------------------------------------------
Confidence 7899999999999864321
Q ss_pred cccccCCCEEEEEcCCCCeecCCCce-EecCCCceecCCCeeecccCCCCCCCCCceEEe----cCCCeecCcEEEEEcC
Q psy11954 620 VATYKIGALVKYRCERGYKVEGEPLS-TCEDTGSWSGSVPECIYVDCGNPETVPNGGFTL----TSNATYYGTAVLYECD 694 (881)
Q Consensus 620 ~~~~~~Gs~v~~~C~~GY~l~G~~~~-tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~----~~~~~~~g~~v~y~C~ 694 (881)
...|.+|++|+|+|++||+|.|+..+ +|+.+| |++..|+|+++.|+.|+.+.||.+.. ....+.+|++|+|+|+
T Consensus 88 ~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~~~~g~~v~y~C~ 166 (277)
T 2wii_C 88 GNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCN 166 (277)
T ss_dssp SSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCSCCCEEEECEECCCCCCTTEECCSSSSCTTCCEETTBEEECEEC
T ss_pred CCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCCCCCcccceeCCCCCcccCCeEEecccccCCcccCCCEEEEEcC
Confidence 23688999999999999999999887 999999 99999999999999999999999876 2456789999999999
Q ss_pred CCceecCCceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc---c-cCCCCccCCCeEEE-c
Q psy11954 695 ENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS---L-TRPALSCLPGKRFY-Y 769 (881)
Q Consensus 695 ~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~-~~~~~~~~g~~v~~-C 769 (881)
+||.|.|+..++|+++|+|++++|+|+.+ .|+.|.+. . .....|.+|++++| |
T Consensus 167 ~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~v----------------------~C~~p~~~nG~~~~~~~~y~~g~~v~~~C 224 (277)
T 2wii_C 167 SGYKIEGDEEMHCSDDGFWSKEKPKCVEI----------------------SCKSPDVINGSPISQKIIYKENERFQYKC 224 (277)
T ss_dssp TTEEEESCSEEEBCTTSSBSSCCCEEEEC----------------------EECCCCCTTEEESSCCCCEETTCEEEEEE
T ss_pred CCccCcCCCCCEECCCCeECCCCCeeeee----------------------eCCCCCCCCCeEccCCCCCcCCCEEEEEc
Confidence 99999999999999999999999999998 68877654 1 12345889999999 9
Q ss_pred cCCceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCce
Q psy11954 770 HRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGR 816 (881)
Q Consensus 770 ~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~ 816 (881)
+.||+|.|+ .+++|++ |+|++. |+|+.+.|+.|+.+.++.
T Consensus 225 ~~Gy~l~G~-----~~~~C~~-g~Ws~~-P~C~~~~C~~p~~~~~~~ 264 (277)
T 2wii_C 225 NMGYEYSER-----GDAVCTE-SGWRPL-PSCEEARGGPEQKLISEE 264 (277)
T ss_dssp CTTEEESSC-----SEEEEET-TEESSC-CCEEEC------------
T ss_pred CCCCeECCC-----CCeEccC-CccCCC-CEEcCCcCCCCCCccccc
Confidence 999999999 8999998 999987 999999999998877664
No 18
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=100.00 E-value=3e-40 Score=349.77 Aligned_cols=241 Identities=28% Similarity=0.606 Sum_probs=208.7
Q ss_pred ccCCCCCcCCCceEEecC-CcccCCcEEEEEeCCCcEEe-Cc-ceEEecCCCcccCCCCcccccccCCCCCcCCCeEEcC
Q psy11954 365 VDCGKLEHIEHGTVTLET-TRTTHGAVAIYACHENYTLI-GE-TRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTS 441 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~~~-~~~~~g~~~~~~C~~Gy~l~-G~-~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ng~~~~~ 441 (881)
++|+.||.++||.+.... ..|.+|++|+|+|++||.|. |. .+++|+.+|+|++..|.|++ .|+.|+.+.||.+...
T Consensus 2 ~~C~~Pp~i~ng~~~~~~~~~~~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~g~Ws~~~p~C~~-~C~~p~~~~~g~~~~~ 80 (254)
T 1ok3_A 2 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQP 80 (254)
T ss_dssp CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTCEECTTSCCEEEEETTTEECCCCCCEEC-CCCSCCCCSSEEECTT
T ss_pred CCCCCCCcCCcceecCCcCcccCCCCEEEEEcCCCcEeCCCCCCEEEeCCCCCCCCCCCcCCC-CCCCCCCCCccccccc
Confidence 689999999999986533 36889999999999999997 64 68999999999998999984 8998888887764210
Q ss_pred CCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcC--CCceeeccCCcccCC
Q psy11954 442 GRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVG--HPRRSCLESKVWSDT 519 (881)
Q Consensus 442 ~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G--~~~~tC~~~G~Ws~~ 519 (881)
. .....|.+|++|+|+|++||.|.| ...++|+++|+|+..
T Consensus 81 ~--------------------------------------~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~C~~~g~Ws~~ 122 (254)
T 1ok3_A 81 Y--------------------------------------ITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTA 122 (254)
T ss_dssp G--------------------------------------GGCCCCCTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCC
T ss_pred c--------------------------------------cccCcCCCCCEEEEEeCCCceeCCCCCCeEEECCCCeECCC
Confidence 0 012336789999999999999987 678999999999999
Q ss_pred cccccccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeee
Q psy11954 520 APKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSV 599 (881)
Q Consensus 520 ~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 599 (881)
.|.|+ ++.|+.|..+.||.+.+.
T Consensus 123 ~p~C~------------------~~~C~~p~~~~nG~~~~~--------------------------------------- 145 (254)
T 1ok3_A 123 VEFCK------------------KKSCPNPGEIRNGQIDVP--------------------------------------- 145 (254)
T ss_dssp CCSEE------------------ECBCCCCCCCTTEEEECT---------------------------------------
T ss_pred CCeeC------------------ccCCcCCCCCCCCEEEcC---------------------------------------
Confidence 99999 789999999999976421
Q ss_pred ecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecccCCCCCCCCCceE
Q psy11954 600 TGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVDCGNPETVPNGGF 676 (881)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~C~~p~~~~nG~~ 676 (881)
..|.+|++|+|+|++||+|.|+..++|+.+| +|++..|+|+++.|+.|+.+.||.+
T Consensus 146 ---------------------~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~ 204 (254)
T 1ok3_A 146 ---------------------GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGII 204 (254)
T ss_dssp ---------------------TCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEE
T ss_pred ---------------------CCcEEcCEEEEECCCCceeCCCcceEEEeCCCcccccCCCCccccccCCCCCCCCCceE
Confidence 2467899999999999999999999999988 8999999999999999999999998
Q ss_pred EecCCCeecCcEEEEEcCCCceecCCceeeecc---CCcccCCCCceee
Q psy11954 677 TLTSNATYYGTAVLYECDENYRLEGHARRLCLE---NGTWSSGLPTCKG 722 (881)
Q Consensus 677 ~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~---~G~Ws~~~P~C~~ 722 (881)
......|.+|++|+|+|++||.|.|+..++|+. +|+|++++|+|++
T Consensus 205 ~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~~~G~Ws~~~P~C~~ 253 (254)
T 1ok3_A 205 QGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 253 (254)
T ss_dssp TTCCSCCBTTCEEEEEECTTCEEEEESEEEEEEETTEEEESSCCCEEEC
T ss_pred ecCCCcccCCCEEEEECCCCCeEcCCCceEEeccCCCCEECCCCCCccc
Confidence 755556789999999999999999999999995 6999999999974
No 19
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted, polymorphism, glycoprotein, complement system, complement pathway, immune response; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2rlp_A 2rlq_A
Probab=100.00 E-value=1.1e-39 Score=349.47 Aligned_cols=241 Identities=26% Similarity=0.605 Sum_probs=204.2
Q ss_pred ccCCCCCcCCCceEEe---cCCcccCCcEEEEEeCCCcEEeCcceEEecCCCcccCCCCc--ccccccCCCCCcCCCeEE
Q psy11954 365 VDCGKLEHIEHGTVTL---ETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQ--CLFDWCAEPPQISGGIVT 439 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~---~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~--C~~~~C~~p~~~~ng~~~ 439 (881)
..|+.||.+.|+.+.. ....|.+|++|+|+|++||.|.|..+++|+ +|.|++..|. |+++.|+.|+.+.||.+.
T Consensus 6 ~~C~~pp~~~n~~i~~g~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~~~P~~~C~~~~C~~p~~~~nG~~~ 84 (277)
T 2wii_C 6 EDCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCR-KGEWVALNPLRKCQKRPCGHPGDTPFGTFT 84 (277)
T ss_dssp --CCSCCCCCSSEEECSCCCCSSCCTTCEEEEEECTTEECSSCEEEEEC-SSSEEESCSSCCCEECBCCCCCCCTTEEEE
T ss_pred ccCcCCCCCccccccccccccCCcCCCCEEEEEcCCCCcCCCCceEEcC-CCeeeCCCCCccccccCCcCCCCCCCCEEE
Confidence 6899998889987653 234688999999999999999999999997 8999987665 888888887777777643
Q ss_pred cCCCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCce-eeccCCcccC
Q psy11954 440 TSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRR-SCLESKVWSD 518 (881)
Q Consensus 440 ~~~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~-tC~~~G~Ws~ 518 (881)
.. ....|.+|++|+|+|++||.|.|...+ +|+.+| |+.
T Consensus 85 ~~----------------------------------------~~~~~~~g~~v~y~C~~Gy~l~G~~~~r~C~~~g-Ws~ 123 (277)
T 2wii_C 85 LT----------------------------------------GGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDG-WTN 123 (277)
T ss_dssp EE----------------------------------------SSSSSBTTCEEEEEECTTEEEESSCCEEEBCSSS-BCS
T ss_pred ec----------------------------------------CCCcccCCCEEEEEcCCCceEeCCCceeEeCCCC-cCC
Confidence 21 123467899999999999999999887 999999 999
Q ss_pred CcccccccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeee
Q psy11954 519 TAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILS 598 (881)
Q Consensus 519 ~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 598 (881)
..|.|+ .+.|+.|..+.||.+....
T Consensus 124 ~~P~C~------------------~~~C~~p~~~~nG~~~~~~------------------------------------- 148 (277)
T 2wii_C 124 DIPICE------------------VVKCLPVTAPENGKIVSSA------------------------------------- 148 (277)
T ss_dssp CCCEEE------------------ECEECCCCCCTTEECCSSS-------------------------------------
T ss_pred CCCccc------------------ceeCCCCCcccCCeEEecc-------------------------------------
Confidence 999999 7899999999999753110
Q ss_pred eecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEe
Q psy11954 599 VTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTL 678 (881)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~ 678 (881)
......|.+|++|+|+|++||.|.|+..++|+.+|+|++..|+|+++.|+.|. +.||.+..
T Consensus 149 ------------------~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~v~C~~p~-~~nG~~~~ 209 (277)
T 2wii_C 149 ------------------MEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPD-VINGSPIS 209 (277)
T ss_dssp ------------------SCTTCCEETTBEEECEECTTEEEESCSEEEBCTTSSBSSCCCEEEECEECCCC-CTTEEESS
T ss_pred ------------------cccCCcccCCCEEEEEcCCCccCcCCCCCEECCCCeECCCCCeeeeeeCCCCC-CCCCeEcc
Confidence 00124688999999999999999999999999999999999999999999764 78999876
Q ss_pred cCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec
Q psy11954 679 TSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN 723 (881)
Q Consensus 679 ~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~ 723 (881)
....|.+|++|+|+|++||+|.|+..++|++ |+|++. |+|+.+
T Consensus 210 ~~~~y~~g~~v~~~C~~Gy~l~G~~~~~C~~-g~Ws~~-P~C~~~ 252 (277)
T 2wii_C 210 QKIIYKENERFQYKCNMGYEYSERGDAVCTE-SGWRPL-PSCEEA 252 (277)
T ss_dssp CCCCEETTCEEEEEECTTEEESSCSEEEEET-TEESSC-CCEEEC
T ss_pred CCCCCcCCCEEEEEcCCCCeECCCCCeEccC-CccCCC-CEEcCC
Confidence 5566789999999999999999999999997 999987 999998
No 20
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of complement pathway, regulator of complement; 2.2A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A 2qzh_A 2qzf_A
Probab=100.00 E-value=1.1e-39 Score=345.43 Aligned_cols=215 Identities=27% Similarity=0.567 Sum_probs=191.1
Q ss_pred ccccCCCEEEEEcCCCCeec-CC-CceEecCCCceecCCCeeecccCCCCCCCCCceEEec---CCCeecCcEEEEEcCC
Q psy11954 621 ATYKIGALVKYRCERGYKVE-GE-PLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT---SNATYYGTAVLYECDE 695 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~-G~-~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~---~~~~~~g~~v~y~C~~ 695 (881)
..|.+|++|+|+|++||.|. |. ..++|+++|+|+...|.|++ .|+.|+.+.||.+... ...|.+|++|+|+|++
T Consensus 21 ~~~~~g~~v~y~C~~Gy~~~~G~~~~~~C~~~g~Ws~~~p~C~~-~C~~p~~~~~g~~~~~~~~~~~~~~g~~~~y~C~~ 99 (254)
T 1ok3_A 21 TSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRP 99 (254)
T ss_dssp SCEETTCEEEEEECTTCEECTTSCCEEEEETTTEECCCCCCEEC-CCCSCCCCSSEEECTTGGGCCCCCTTCEEEEEECT
T ss_pred cccCCCCEEEEEcCCCcEeCCCCCCEEEeCCCCCCCCCCCcCCC-CCCCCCCCCcccccccccccCcCCCCCEEEEEeCC
Confidence 46889999999999999987 64 68999999999998999984 8999999999988642 3346689999999999
Q ss_pred CceecC--CceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc----ccCCCCccCCCeEEE-
Q psy11954 696 NYRLEG--HARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS----LTRPALSCLPGKRFY- 768 (881)
Q Consensus 696 Gy~L~G--~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~~~~~~~~~g~~v~~- 768 (881)
||.|.| +.+++|+++|+|++..|.|+.+ .|+.|+.+ ......+.+|++++|
T Consensus 100 Gy~l~g~~~~~~~C~~~g~Ws~~~p~C~~~----------------------~C~~p~~~~nG~~~~~~~~~~g~~v~~~ 157 (254)
T 1ok3_A 100 GYRREPSLSPKLTCLQNLKWSTAVEFCKKK----------------------SCPNPGEIRNGQIDVPGGILFGATISFS 157 (254)
T ss_dssp TEEECTTSCCEEEBCTTSCBCCCCCSEEEC----------------------BCCCCCCCTTEEEECTTCSBTTCEEEEE
T ss_pred CceeCCCCCCeEEECCCCeECCCCCeeCcc----------------------CCcCCCCCCCCEEEcCCCcEEcCEEEEE
Confidence 999987 6889999999999999999988 79988766 222356789999999
Q ss_pred ccCCceeeccccCceeEEEEccCC---eeecCCCccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCe
Q psy11954 769 YHRGIFRLQNTQKVSYTRTCTKRG---TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYL 845 (881)
Q Consensus 769 C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~p~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~ 845 (881)
|++||+|+|+ .+++|+++| +|++..|+|+.+.|+.|+.+.||.+......+.||++|+|+|++||.|.|+.+
T Consensus 158 C~~Gy~l~G~-----~~~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~ 232 (254)
T 1ok3_A 158 CNTGYKLFGS-----TSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHS 232 (254)
T ss_dssp ECTTEEEESC-----SEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEEEESE
T ss_pred CCCCceeCCC-----cceEEEeCCCcccccCCCCccccccCCCCCCCCCceEecCCCcccCCCEEEEECCCCCeEcCCCc
Confidence 9999999999 899999998 99999999999999999999999886544568899999999999999999999
Q ss_pred eEeCC---CCeecCCCCceec
Q psy11954 846 RKCME---DGSWSGDEPRCEK 863 (881)
Q Consensus 846 ~~C~~---~G~Ws~~~P~C~~ 863 (881)
++|++ +|+|++++|+|++
T Consensus 233 ~~C~~~~~~G~Ws~~~P~C~~ 253 (254)
T 1ok3_A 233 IYCTVNNDEGEWSGPPPECRG 253 (254)
T ss_dssp EEEEEETTEEEESSCCCEEEC
T ss_pred eEEeccCCCCEECCCCCCccc
Confidence 99984 7999999999974
No 21
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=100.00 E-value=5e-39 Score=357.29 Aligned_cols=231 Identities=26% Similarity=0.544 Sum_probs=193.1
Q ss_pred ccccCCCEEEEEcCCCCeec-C-CCceEecCCCceecCCCeeecccCCCCCCCCCceEEe---cCCCeecCcEEEEEcCC
Q psy11954 621 ATYKIGALVKYRCERGYKVE-G-EPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTL---TSNATYYGTAVLYECDE 695 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~-G-~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~---~~~~~~~g~~v~y~C~~ 695 (881)
..|.+|++|+|+|++||.|. | ...++|+++|+|+...|.|++ .|+.|+.+.||.+.. ....|.+|++|.|+|++
T Consensus 53 ~~y~~G~~v~y~C~~Gy~l~~G~~~~~~C~~dG~Ws~~~p~C~~-~C~~P~~~~~g~~~~~~~~~~~~~~Gs~v~y~C~~ 131 (381)
T 3iyp_F 53 TSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRP 131 (381)
T ss_dssp SCEETTCEEEEEECTTEEECTTSCCEEEEETTTEECCCCCCEEE-BCCSCCCCSSEEECTTGGGCCCCBTTCEEEEEECT
T ss_pred ccccCCCEEEEEcCCCCEecCCCCCeEEECCCCcccccCCcccc-cCCCCccccCCcccccccCCCcccCCCEEEEEcCC
Confidence 57889999999999999997 6 468999999999998999997 899999999998753 23456789999999999
Q ss_pred CceecC--CceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc----ccCCCCccCCCeEEE-
Q psy11954 696 NYRLEG--HARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS----LTRPALSCLPGKRFY- 768 (881)
Q Consensus 696 Gy~L~G--~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~~~~~~~~~g~~v~~- 768 (881)
||.|.| +..++|+++|+|++..|.|+.+ .|+.|..+ ......+.+|+.++|
T Consensus 132 GY~l~g~~~~~~tC~~~g~Ws~~~p~C~~~----------------------~C~~p~~~~nG~~~~~~~~~~Gs~v~y~ 189 (381)
T 3iyp_F 132 GYRREPSLSPKLTCLQNLKWSTAVEFCKKK----------------------SCPNPGEIRNGQIDVPGGILFGATISFS 189 (381)
T ss_dssp TEEECTTSCCEEEBCTTSCBCCCCCSEEEC----------------------BCCCCCCCTTEEEECSSCSBTTCEEEEE
T ss_pred CcccCCCCCceEEecCCCcCcccCceeccc----------------------cCCCCCccCCCceecCCCcCcCCEEEEE
Confidence 999998 6789999999999999999988 79988765 223356789999999
Q ss_pred ccCCceeeccccCceeEEEEccCC---eeecCCCccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCe
Q psy11954 769 YHRGIFRLQNTQKVSYTRTCTKRG---TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYL 845 (881)
Q Consensus 769 C~~Gy~l~G~~~~~~~~~~C~~~G---~Ws~~~p~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~ 845 (881)
|++||+|.|+ .+++|+.+| +|++..|.|+.+.|+.|+.+.||.+......|.||++|+|+|++||.|+|+..
T Consensus 190 C~~GY~L~G~-----~~~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~~~ 264 (381)
T 3iyp_F 190 CNTGYKLFGS-----TSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHS 264 (381)
T ss_dssp ECTTEEEESC-----SEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEEETCCSCCBTTCEEEEEECTTCEEESCSE
T ss_pred eCCCcccCCc-----cceEEecCCCcceEcCCCCeeeeeecCCCCCCCCCeEecCCCCeecCCEEEEEeCCCCEeCCCCc
Confidence 9999999999 899999998 89999999999999999999999987665568899999999999999999999
Q ss_pred eEeC---CCCeecCCCCceeccCC--CCCCCCCCCCCCC
Q psy11954 846 RKCM---EDGSWSGDEPRCEKRFN--SGIPGRSRRSPIN 879 (881)
Q Consensus 846 ~~C~---~~G~Ws~~~P~C~~~~~--~~~~~~~~~~~~~ 879 (881)
++|+ ++|+|++++|+|+++.+ ..+|.+.+...+|
T Consensus 265 ~~C~~~~~~G~Ws~~~P~C~~~~~~~~~pP~~~~~~~~~ 303 (381)
T 3iyp_F 265 IYCTVNNDEGEWSGPPPECRGKSLTSKVPPTVQKPTTVN 303 (381)
T ss_dssp EEEECTTSSCEESSCCCEEEC------------------
T ss_pred EEecccCCCCEEcCCCCeEeCCCCCCCCcCCCCCCcccc
Confidence 9998 47999999999999874 6677777766655
No 22
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex, echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=355.26 Aligned_cols=242 Identities=27% Similarity=0.612 Sum_probs=210.7
Q ss_pred ccCCCCCcCCCceEEec-CCcccCCcEEEEEeCCCcEEe-C-cceEEecCCCcccCCCCcccccccCCCCCcCCCeEEcC
Q psy11954 365 VDCGKLEHIEHGTVTLE-TTRTTHGAVAIYACHENYTLI-G-ETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTS 441 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~~-~~~~~~g~~~~~~C~~Gy~l~-G-~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ng~~~~~ 441 (881)
..|+.|+.++||.+... ...|.+|++|+|+|++||.|. | ...++|+.+|+|++..|.|++ .|+.|+.+.||.+...
T Consensus 34 ~~C~~PP~i~ng~~~~~~~~~y~~G~~v~y~C~~Gy~l~~G~~~~~~C~~dG~Ws~~~p~C~~-~C~~P~~~~~g~~~~~ 112 (381)
T 3iyp_F 34 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNR-SCEVPTRLNSASLKQP 112 (381)
T ss_dssp CEECSCCCCTTEEECCTTCSCEETTCEEEEEECTTEEECTTSCCEEEEETTTEECCCCCCEEE-BCCSCCCCSSEEECTT
T ss_pred ccCcCCCCCCCCEEecCCCccccCCCEEEEEcCCCCEecCCCCCeEEECCCCcccccCCcccc-cCCCCccccCCccccc
Confidence 68999999999998643 346889999999999999998 6 468999999999998999986 8998888777754210
Q ss_pred CCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcC--CCceeeccCCcccCC
Q psy11954 442 GRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVG--HPRRSCLESKVWSDT 519 (881)
Q Consensus 442 ~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G--~~~~tC~~~G~Ws~~ 519 (881)
. .....|.+|++|+|+|++||.|.| ...++|+++|+|+..
T Consensus 113 ------------------------------------~--~~~~~~~~Gs~v~y~C~~GY~l~g~~~~~~tC~~~g~Ws~~ 154 (381)
T 3iyp_F 113 ------------------------------------Y--ITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTA 154 (381)
T ss_dssp ------------------------------------G--GGCCCCBTTCEEEEEECTTEEECTTSCCEEEBCTTSCBCCC
T ss_pred ------------------------------------c--cCCCcccCCCEEEEEcCCCcccCCCCCceEEecCCCcCccc
Confidence 0 012347789999999999999998 578999999999999
Q ss_pred cccccccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeee
Q psy11954 520 APKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSV 599 (881)
Q Consensus 520 ~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 599 (881)
.|.|+ ++.|+.|..+.||.+.+.
T Consensus 155 ~p~C~------------------~~~C~~p~~~~nG~~~~~--------------------------------------- 177 (381)
T 3iyp_F 155 VEFCK------------------KKSCPNPGEIRNGQIDVP--------------------------------------- 177 (381)
T ss_dssp CCSEE------------------ECBCCCCCCCTTEEEECS---------------------------------------
T ss_pred Cceec------------------cccCCCCCccCCCceecC---------------------------------------
Confidence 99999 889999999999976421
Q ss_pred ecCCccccceeeeccCCCCCcccccCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecccCCCCCCCCCceE
Q psy11954 600 TGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVDCGNPETVPNGGF 676 (881)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~C~~p~~~~nG~~ 676 (881)
..|.+|++|+|+|++||.|.|+..++|+.+| +|++..|.|+++.|+.|+.+.||.+
T Consensus 178 ---------------------~~~~~Gs~v~y~C~~GY~L~G~~~~~C~~~G~~~~Ws~~~P~C~~v~C~~p~~~~nG~~ 236 (381)
T 3iyp_F 178 ---------------------GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGII 236 (381)
T ss_dssp ---------------------SCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEE
T ss_pred ---------------------CCcCcCCEEEEEeCCCcccCCccceEEecCCCcceEcCCCCeeeeeecCCCCCCCCCeE
Confidence 2467899999999999999999999999888 8999999999999999999999999
Q ss_pred EecCCCeecCcEEEEEcCCCceecCCceeeec---cCCcccCCCCceeec
Q psy11954 677 TLTSNATYYGTAVLYECDENYRLEGHARRLCL---ENGTWSSGLPTCKGN 723 (881)
Q Consensus 677 ~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~---~~G~Ws~~~P~C~~~ 723 (881)
......|.||++|+|+|++||.|.|+..++|+ ++|+|++++|+|+++
T Consensus 237 ~~~~~~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~~~~G~Ws~~~P~C~~~ 286 (381)
T 3iyp_F 237 QGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGK 286 (381)
T ss_dssp ETCCSCCBTTCEEEEEECTTCEEESCSEEEEECTTSSCEESSCCCEEEC-
T ss_pred ecCCCCeecCCEEEEEeCCCCEeCCCCcEEecccCCCCEEcCCCCeEeCC
Confidence 87666678999999999999999999999999 479999999999987
No 23
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=100.00 E-value=6.6e-39 Score=345.47 Aligned_cols=238 Identities=24% Similarity=0.566 Sum_probs=205.9
Q ss_pred ccCCCCCcCCCceEEec--CCcccCCcEEEEEeCCCcEEeCcceEEecCCCcccCCCCcccccccCCCCCcCCCeEEcCC
Q psy11954 365 VDCGKLEHIEHGTVTLE--TTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSG 442 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~~--~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ng~~~~~~ 442 (881)
..|+.|+.+.||.+... ...|.+|++|+|+|++|| +.|..+++|+.+|+|++..|.|+++.|+.|+.+.||.+..
T Consensus 36 ~~C~~pp~~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~-- 112 (290)
T 2xrb_A 36 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHV-- 112 (290)
T ss_dssp -CBCSCCCCSSEEESSCCSCSCBCTTCEEEEEECTTB-CCCEEEEEECTTSCEECCTTCSCBCBCCCCCCCTTEEEEE--
T ss_pred ccccCCCCCCccccccccccCcccCCCEEEEEccCCc-CCCCCeEEECCCCeECCCCCCcCcCCCcCCCCCCCceEec--
Confidence 68999999999987543 236889999999999999 4577789999999999989999999999888877776532
Q ss_pred CCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeeccCC---cccCC
Q psy11954 443 RRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDT 519 (881)
Q Consensus 443 ~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G---~Ws~~ 519 (881)
...+.+|++|+|+|++||.|.|+..++|+.+| +|++.
T Consensus 113 ----------------------------------------~~~~~~G~~v~y~C~~GY~l~G~~~~~C~~~g~~~~Ws~~ 152 (290)
T 2xrb_A 113 ----------------------------------------NTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAE 152 (290)
T ss_dssp ----------------------------------------SSCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSC
T ss_pred ----------------------------------------CCCcccCCEEEEECCCCceeCCCCceEEEeCCCCceeCCC
Confidence 12367899999999999999999999999988 79999
Q ss_pred cccccccccccceeccccccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeee
Q psy11954 520 APKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSV 599 (881)
Q Consensus 520 ~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 599 (881)
.|.|+ .+.|+.|+.+.||.+...
T Consensus 153 ~P~C~------------------~v~C~~p~~~~nG~~~~~--------------------------------------- 175 (290)
T 2xrb_A 153 APICE------------------SIPCEIPPSIPNGDFFSP--------------------------------------- 175 (290)
T ss_dssp CCEEE------------------ECEECCCCCBTTEEEECS---------------------------------------
T ss_pred CCeec------------------cccCCCCCCCCCCeEecC---------------------------------------
Confidence 99999 789999999999975321
Q ss_pred ecCCccccceeeeccCCCCCcccccCCCEEEEEcCCC------CeecCCCceEecCC----CceecCCCeeec-ccCCCC
Q psy11954 600 TGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG------YKVEGEPLSTCEDT----GSWSGSVPECIY-VDCGNP 668 (881)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~Gs~v~~~C~~G------Y~l~G~~~~tC~~~----G~Ws~~~P~C~~-v~C~~p 668 (881)
....|.+|++|+|+|++| |.|.|+..++|+.+ |+|+++.|+|+. +.|++
T Consensus 176 -------------------~~~~~~~g~~v~y~C~~G~~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~- 235 (290)
T 2xrb_A 176 -------------------NREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTP- 235 (290)
T ss_dssp -------------------STTCEETTCEEEEEECBCTTSCBCEEEESCSEEEEEESSSSSEEESSCCCEEEETTEECC-
T ss_pred -------------------CCCccccCCEEEEEeCCCCCCcceEEecCCceeEecCCCCCCCeECCCCCcccccccCCC-
Confidence 124688999999999999 99999999999987 999999999996 78987
Q ss_pred CCCCCceEEec-CCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceee
Q psy11954 669 ETVPNGGFTLT-SNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKG 722 (881)
Q Consensus 669 ~~~~nG~~~~~-~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~ 722 (881)
+.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+++|+|+++.|+|++
T Consensus 236 p~~~nG~~~~~~~~~y~~g~~v~f~C~~Gy~l~G~~~~~C~~~g~Ws~~~P~C~a 290 (290)
T 2xrb_A 236 PHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCAA 290 (290)
T ss_dssp CCCTTEEECSCCCSSEETTCEEEEEECTTCEEESCSEEEEETTTEEESCCCEEEC
T ss_pred CCCCCCeEecCCCCcccCCCEEEEEcCCCCEECCCCCeEECCCCeECCCCCeeeC
Confidence 46889988653 3457799999999999999999999999999999999999974
No 24
>2xrb_A Complement regulatory protein CRRY; immune system, immunology; 2.50A {Rattus norvegicus} PDB: 2xrd_A
Probab=100.00 E-value=1.3e-38 Score=343.17 Aligned_cols=213 Identities=24% Similarity=0.556 Sum_probs=190.4
Q ss_pred ccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceec
Q psy11954 621 ATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLE 700 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~ 700 (881)
..|.+|++|+|+|++|| +.|+..++|+.+|+|++..|.|+++.|+.|+.+.||.+... ..+.+|++|+|+|++||+|.
T Consensus 56 ~~~~~g~~~~y~C~~Gy-~~~~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~G~~v~y~C~~GY~l~ 133 (290)
T 2xrb_A 56 STFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVN-TDIRFGSSITYTCNEGYRLI 133 (290)
T ss_dssp SCBCTTCEEEEEECTTB-CCCEEEEEECTTSCEECCTTCSCBCBCCCCCCCTTEEEEES-SCSBTTCEEEEEECTTEEEE
T ss_pred CcccCCCEEEEEccCCc-CCCCCeEEECCCCeECCCCCCcCcCCCcCCCCCCCceEecC-CCcccCCEEEEECCCCceeC
Confidence 46899999999999999 55667899999999999899999999999999999999764 45789999999999999999
Q ss_pred CCceeeeccCC---cccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc----cc--CCCCccCCCeEEE-cc
Q psy11954 701 GHARRLCLENG---TWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS----LT--RPALSCLPGKRFY-YH 770 (881)
Q Consensus 701 G~~~~~C~~~G---~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~~--~~~~~~~g~~v~~-C~ 770 (881)
|+..++|+.+| +|++..|.|+.+ .|+.|+.+ .. ....|.+|++|+| |+
T Consensus 134 G~~~~~C~~~g~~~~Ws~~~P~C~~v----------------------~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~ 191 (290)
T 2xrb_A 134 GSSSAMCIISDQSVAWDAEAPICESI----------------------PCEIPPSIPNGDFFSPNREDFHYGMVVTYQCN 191 (290)
T ss_dssp SCSEEEEEEETTEEEESSCCCEEEEC----------------------EECCCCCBTTEEEECSSTTCEETTCEEEEEEC
T ss_pred CCCceEEEeCCCCceeCCCCCeeccc----------------------cCCCCCCCCCCeEecCCCCccccCCEEEEEeC
Confidence 99999999888 899999999998 69988765 11 2356889999999 99
Q ss_pred CC------ceeeccccCceeEEEEccC----CeeecCCCcccc-ccCCCCCCCCCceEEEc-cCcccCCCEEEEEcCCCC
Q psy11954 771 RG------IFRLQNTQKVSYTRTCTKR----GTWSGHIPTCKA-IDCSHPGSIDNGRVIIM-NQTTTYNSAVEYHCVPQY 838 (881)
Q Consensus 771 ~G------y~l~G~~~~~~~~~~C~~~----G~Ws~~~p~C~~-v~C~~p~~~~nG~~~~~-~~~~~~g~~v~f~C~~Gy 838 (881)
.| |.|.|+ .+++|+++ |+|++..|+|+. +.|+.| .+.||.+... ...|.||++|+|+|++||
T Consensus 192 ~G~~~~~~y~l~G~-----~~~~C~~~~~~~G~Ws~~~P~C~~~~~C~~p-~~~nG~~~~~~~~~y~~g~~v~f~C~~Gy 265 (290)
T 2xrb_A 192 TDARGKKLFNLVGE-----PSIHCTSIDGQVGVWSGPPPQCIELNKCTPP-HVENAVIVSKNKSLFSLRDMVEFRCQDGF 265 (290)
T ss_dssp BCTTSCBCEEEESC-----SEEEEEESSSSSEEESSCCCEEEETTEECCC-CCTTEEECSCCCSSEETTCEEEEEECTTC
T ss_pred CCCCCcceEEecCC-----ceeEecCCCCCCCeECCCCCcccccccCCCC-CCCCCeEecCCCCcccCCCEEEEEcCCCC
Confidence 99 999999 89999987 999999999996 799984 7889988653 344788999999999999
Q ss_pred EEcCCCeeEeCCCCeecCCCCceec
Q psy11954 839 QRIGPYLRKCMEDGSWSGDEPRCEK 863 (881)
Q Consensus 839 ~l~G~~~~~C~~~G~Ws~~~P~C~~ 863 (881)
.|.|+.+++|++||+|++++|+|++
T Consensus 266 ~l~G~~~~~C~~~g~Ws~~~P~C~a 290 (290)
T 2xrb_A 266 MMKGDSSVYCRSLNRWEPQLPSCAA 290 (290)
T ss_dssp EEESCSEEEEETTTEEESCCCEEEC
T ss_pred EECCCCCeEECCCCeECCCCCeeeC
Confidence 9999999999999999999999974
No 25
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=100.00 E-value=2.7e-39 Score=339.98 Aligned_cols=209 Identities=26% Similarity=0.638 Sum_probs=188.0
Q ss_pred ccccCCCEEEEEcCCCCeecCC--CceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCce
Q psy11954 621 ATYKIGALVKYRCERGYKVEGE--PLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYR 698 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~--~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~ 698 (881)
..|.+|++|+|+|++||.|.|. ..++| .+|.|+.. |.|+++.|+.|+.+.||.+.. ..+.+|++|+|+|++||+
T Consensus 23 ~~~~~g~~~~y~C~~Gy~~~g~~~~~~~C-~~g~Ws~~-p~C~~~~C~~p~~~~nG~~~~--~~~~~g~~~~y~C~~Gy~ 98 (244)
T 1rid_A 23 ANYNIGDTIEYLCLPGYRKQKMGPIYAKC-TGTGWTLF-NQCIKRRCPSPRDIDNGQLDI--GGVDFGSSITYSCNSGYH 98 (244)
T ss_dssp CCCSSCCEECCBCCTTCEECSSCSSSEEE-ETTEEESC-CCEECCCCCCCCCCSSCBCCC--CCCSSCCCBCCBCCSSCE
T ss_pred CccCCCCEEEEEeCCCCeEcCCCCCeEEc-CCCcCCCC-CeeeeCCCcCCCCCCCCEEeC--CCcccCCEEEEECCCCCe
Confidence 5789999999999999999976 89999 79999976 999999999999999999876 567799999999999999
Q ss_pred ecCCceeeeccC----CcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc----cc-CCCCccCCCeEEE-
Q psy11954 699 LEGHARRLCLEN----GTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS----LT-RPALSCLPGKRFY- 768 (881)
Q Consensus 699 L~G~~~~~C~~~----G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~----~~-~~~~~~~g~~v~~- 768 (881)
|.|...++|+.+ |+|++..|.|+.+ .|+.|+.+ .. ....|.+|++++|
T Consensus 99 l~G~~~~~C~~~~g~~g~Ws~~~p~C~~~----------------------~C~~p~~~~nG~~~~~~~~~~~g~~v~y~ 156 (244)
T 1rid_A 99 LIGESKSYCELGSTGSMVWNPEAPICESV----------------------KCQSPPSISNGRHNGYEDFYTDGSVVTYS 156 (244)
T ss_dssp ESSCSSBCBCCSSSSCCSBSSCSCCEESS----------------------CCCSCCCCSSCEECCSSSSCCSSCCBCEE
T ss_pred ECCCcceEEECCCCCccccCCCCCeeccC----------------------cCcCCCCCCCCEEecCCCceecCCeEEEE
Confidence 999999999876 7999999999998 79988766 11 2356889999999
Q ss_pred ccCCceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCceEEEc-cCcccCCCEEEEEcCCCCEEcCCCeeE
Q psy11954 769 YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIM-NQTTTYNSAVEYHCVPQYQRIGPYLRK 847 (881)
Q Consensus 769 C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~~~~~-~~~~~~g~~v~f~C~~Gy~l~G~~~~~ 847 (881)
|+.||.|.|+ .+++|++ |+|+ ..|+|+.+.|+.| .+.||.+... ...+.||++|+|+|++||.|.|+..++
T Consensus 157 C~~Gy~l~G~-----~~~~C~~-g~Ws-~~P~C~~~~C~~p-~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~ 228 (244)
T 1rid_A 157 CNSGYSLIGN-----SGVLCSG-GEWS-DPPTCQIVKCPHP-TISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSST 228 (244)
T ss_dssp CCSSCEEECS-----SSBCCSS-SCCC-SCCEEESCCCCCC-CCSSCBCCSSCCSSCCSCCCCCCBCSSSCEEESCSCCE
T ss_pred eCCCCeeCCC-----CceEECC-CccC-CCCeeeeeeCcCC-CCcCCeeccCCCCcccCCCEEEEEcCCCCEECCCCCeE
Confidence 9999999999 8999998 9999 9999999999976 6889987532 345889999999999999999999999
Q ss_pred eCCCCeecCCCCceec
Q psy11954 848 CMEDGSWSGDEPRCEK 863 (881)
Q Consensus 848 C~~~G~Ws~~~P~C~~ 863 (881)
|++||+|++.+|+|++
T Consensus 229 C~~~g~Ws~~~P~C~~ 244 (244)
T 1rid_A 229 CSPGNTWKPELPKCVR 244 (244)
T ss_dssp EETTTEEESCCCEEEC
T ss_pred ECCCCeECCCCCEeeC
Confidence 9999999999999974
No 26
>1rid_A Complement control protein; regulation, SCR, immune system; HET: IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A 1vvc_A 1vvd_A 1vve_A
Probab=100.00 E-value=6.4e-39 Score=337.12 Aligned_cols=226 Identities=26% Similarity=0.493 Sum_probs=200.1
Q ss_pred cCCCCCCCCCCceeecc-----CceecCcEEEEEcCCCcEEcCC--CceeeccCCcccCCcccccccccccceecccccc
Q psy11954 467 DCGRLTAIPYGSISYLN-----ETTYLGSEVLYSCSRNYRLVGH--PRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAV 539 (881)
Q Consensus 467 ~C~~p~~~~nG~~~~~~-----~~~~~gs~v~y~C~~Gy~L~G~--~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~ 539 (881)
.|++||.++|+.+.... ..|.+|++|+|+|++||.|.|. ..++| .+|+|++. |.|+
T Consensus 1 ~C~~PP~~~n~~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~~~g~~~~~~~C-~~g~Ws~~-p~C~--------------- 63 (244)
T 1rid_A 1 CCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKC-TGTGWTLF-NQCI--------------- 63 (244)
T ss_dssp CCCCCCCCSSSCBCCSSCCCSSCCCSSCCEECCBCCTTCEECSSCSSSEEE-ETTEEESC-CCEE---------------
T ss_pred CcCCCCCCCccEecCCccccccCccCCCCEEEEEeCCCCeEcCCCCCeEEc-CCCcCCCC-Ceee---------------
Confidence 48999999999987643 5688999999999999999976 88999 79999986 9999
Q ss_pred ccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCC
Q psy11954 540 DRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASS 619 (881)
Q Consensus 540 ~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (881)
++.|+.|..+.||.+..
T Consensus 64 ---~~~C~~p~~~~nG~~~~------------------------------------------------------------ 80 (244)
T 1rid_A 64 ---KRRCPSPRDIDNGQLDI------------------------------------------------------------ 80 (244)
T ss_dssp ---CCCCCCCCCCSSCBCCC------------------------------------------------------------
T ss_pred ---eCCCcCCCCCCCCEEeC------------------------------------------------------------
Confidence 78999999888886421
Q ss_pred cccccCCCEEEEEcCCCCeecCCCceEecCC----CceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCC
Q psy11954 620 VATYKIGALVKYRCERGYKVEGEPLSTCEDT----GSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDE 695 (881)
Q Consensus 620 ~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~----G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~ 695 (881)
..|.+|++|+|+|++||+|.|+..++|+.+ |+|++..|.|+++.|+.|+.+.||.+......+.+|++|+|+|++
T Consensus 81 -~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~g~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~ 159 (244)
T 1rid_A 81 -GGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNS 159 (244)
T ss_dssp -CCCSSCCCBCCBCCSSCEESSCSSBCBCCSSSSCCSBSSCSCCEESSCCCSCCCCSSCEECCSSSSCCSSCCBCEECCS
T ss_pred -CCcccCCEEEEECCCCCeECCCcceEEECCCCCccccCCCCCeeccCcCcCCCCCCCCEEecCCCceecCCeEEEEeCC
Confidence 357899999999999999999999999876 799999999999999999999999998545567899999999999
Q ss_pred CceecCCceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc---cc--CCCCccCCCeEEE-c
Q psy11954 696 NYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS---LT--RPALSCLPGKRFY-Y 769 (881)
Q Consensus 696 Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~~--~~~~~~~g~~v~~-C 769 (881)
||.|.|+..++|++ |+|+ ++|+|+.+ .|+.|... +. ....|.+|++|+| |
T Consensus 160 Gy~l~G~~~~~C~~-g~Ws-~~P~C~~~----------------------~C~~p~~~ng~~~~~~~~~~~~g~~v~~~C 215 (244)
T 1rid_A 160 GYSLIGNSGVLCSG-GEWS-DPPTCQIV----------------------KCPHPTISNGYLSSGFKRSYSYNDNVDFKC 215 (244)
T ss_dssp SCEEECSSSBCCSS-SCCC-SCCEEESC----------------------CCCCCCCSSCBCCSSCCSSCCSCCCCCCBC
T ss_pred CCeeCCCCceEECC-CccC-CCCeeeee----------------------eCcCCCCcCCeeccCCCCcccCCCEEEEEc
Confidence 99999999999997 9999 89999988 69876544 11 1346889999999 9
Q ss_pred cCCceeeccccCceeEEEEccCCeeecCCCccc
Q psy11954 770 HRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCK 802 (881)
Q Consensus 770 ~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~ 802 (881)
+.||.|.|+ ..++|+++|+|++..|+|+
T Consensus 216 ~~Gy~l~G~-----~~~~C~~~g~Ws~~~P~C~ 243 (244)
T 1rid_A 216 KYGYKLSGS-----SSSTCSPGNTWKPELPKCV 243 (244)
T ss_dssp SSSCEEESC-----SCCEEETTTEEESCCCEEE
T ss_pred CCCCEECCC-----CCeEECCCCeECCCCCEee
Confidence 999999999 8999999999999999996
No 27
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=100.00 E-value=1.3e-35 Score=284.95 Aligned_cols=142 Identities=27% Similarity=0.277 Sum_probs=120.8
Q ss_pred ccCcccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCC
Q psy11954 14 IHFISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPL 93 (881)
Q Consensus 14 ~~~~~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~ 93 (881)
++...+.||||||+|+|||++..+.|++||||+++++|.+++|+||..+.+|||+||||+.|.|++|+|+||.|||.+|+
T Consensus 7 ~~p~~~~NlAlgk~a~~SS~~~~~~a~~AvDG~~~t~w~~~sct~T~~~~~~Ww~VDLg~~~~V~~V~i~~r~d~~~~r~ 86 (148)
T 2j22_A 7 RTPKKLSNIALTKETRQSSTDYNGFSRLAVDGNKNGDYGHHSVTHTKEDSPSWWEIDLAQTEELEKLIIYNRTDAEIQRL 86 (148)
T ss_dssp -----CEETTTTCEEEESCCCTTCCGGGGGSSCCCCCGGGTCCCCCCSCTTCEEEEEEEEEEEEEEEEEEECCSSCGGGS
T ss_pred CCCCCCccccCCCceeECCCCCCCccCccEeCCCCCcccccceeccCCCCCCEEEEECCCCEEeeEEEEEecCCCccccc
Confidence 44446899999999999999988899999999999999999999999999999999999999999999999999999999
Q ss_pred cccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEE
Q psy11954 94 QDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQL 173 (881)
Q Consensus 94 ~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~ 173 (881)
.+|+|+|+++.+ + +.|.... ....+..++|.|. +|.||||||++
T Consensus 87 ~~~~I~vg~s~d---~-------------------------------~~~~~~~-~~~~~~~~~~~~~-~~~gRYVrv~~ 130 (148)
T 2j22_A 87 SNFDIIIYDSND---Y-------------------------------EVFTQHI-DSLESNNLSIDLK-GLKGKKVRISL 130 (148)
T ss_dssp EEEEEEEECTTS---C-------------------------------EEEEEEE-EECSSSEEEEEEE-EEEEEEEEEEE
T ss_pred CCEEEEEEeCCC---C-------------------------------Cccccee-cCCCCCEEEEEeC-CeeEEEEEEEE
Confidence 999999998844 1 2222211 1224668899995 79999999999
Q ss_pred ecCccceEeeEEEeeccc
Q psy11954 174 VGVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 174 ~g~~~~l~l~EveV~g~~ 191 (881)
++....|+||||||||.+
T Consensus 131 ~g~~~~lsL~EveVyg~~ 148 (148)
T 2j22_A 131 RSAGIPLSLAEVEVYTYK 148 (148)
T ss_dssp SSTTCCCCEEEEEEEECC
T ss_pred ECCCCceEEEEEEEEecC
Confidence 998889999999999863
No 28
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=100.00 E-value=2.9e-34 Score=277.08 Aligned_cols=139 Identities=24% Similarity=0.316 Sum_probs=122.3
Q ss_pred CcccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcc
Q psy11954 16 FISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQD 95 (881)
Q Consensus 16 ~~~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~ 95 (881)
...+.||||||+|+|||++..+.|++||||+++++|.+++|+||..+.+|||+||||+.|.|++|+|+||.|||.+|+.+
T Consensus 12 ~~~~~NlAlgk~at~SS~~~~~~a~~AvDGn~~t~w~~~sct~t~~~~~~W~~VDLg~~~~V~~V~i~~r~d~~~~r~~~ 91 (151)
T 2j1v_A 12 NDGNLNIAYAKPTTQSSVDYNGDPNRAVDGNRNGNFNSGSVTHTRADNPSWWEVDLKKMDKVGLVKIYNRTDAETQRLSN 91 (151)
T ss_dssp ETTEECTTTTCCEEESCCCTTCCGGGGGSSCCCCCGGGTCCCCCCSCTTCEEEEEEEEEEEEEEEEEEECCSSCGGGSCS
T ss_pred CCCCccccCCCCeeECCCCCCCCcCccEeCCCcCcccccccccCCCCCCCEEEEECCCCeEcCEEEEEcCCCccccccCC
Confidence 33568999999999999988889999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec
Q psy11954 96 LEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG 175 (881)
Q Consensus 96 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g 175 (881)
|+|+|+++.. |+.|+.... ...|..+++.|. +|.||||||++++
T Consensus 92 ~~I~v~~~~~----------------------------------~~~~~~~~~-~~~g~~~~~~~~-~~~gRYVrv~~~g 135 (151)
T 2j1v_A 92 FDVILYDNNR----------------------------------NEVAKKHVN-NLSGESVSLDFK-EKGARYIKVKLLT 135 (151)
T ss_dssp EEEEEECTTC----------------------------------CEEEEEEEC-CCSSSEEEEEEE-EEEEEEEEEEESS
T ss_pred EEEEEECCCC----------------------------------CceEeeEEc-CCCCCEEEEecC-CeeEEEEEEEEEC
Confidence 9999998721 344543222 235678899995 8999999999999
Q ss_pred CccceEeeEEEeecc
Q psy11954 176 VEGSLSLCEVEIFTT 190 (881)
Q Consensus 176 ~~~~l~l~EveV~g~ 190 (881)
....|+|||||||+.
T Consensus 136 ~~~~lsL~EveVyg~ 150 (151)
T 2j1v_A 136 SGVPLSLAEVEVFRE 150 (151)
T ss_dssp TTCCCCEEEEEECCC
T ss_pred CCCceEEEEEEEEcC
Confidence 878999999999985
No 29
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=100.00 E-value=5.9e-34 Score=277.80 Aligned_cols=143 Identities=36% Similarity=0.620 Sum_probs=125.9
Q ss_pred ccccccCCCCceeccCCCC-----CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCC
Q psy11954 18 SGTNVALRRPTNQSSTIRG-----APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQP 92 (881)
Q Consensus 18 ~~~nlA~~k~a~qSS~~~~-----~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~ 92 (881)
.+.||||||+|+|||++.. +.|++||||+++++|.+++|+||..+.+|||+||||+.|.|++|+|+||.||+.+|
T Consensus 7 ~~~NlA~gk~a~aSS~~~~~~~~~~~a~~AvDGn~~t~w~s~sc~~T~~~~~~W~~VDLg~~~~V~~V~i~~r~d~~~~r 86 (158)
T 1k12_A 7 TQENVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLLQVYTITSVTITNRGDCCGER 86 (158)
T ss_dssp EEEEGGGGSEEEESCBCCSTTGGGCCGGGGGSSCCCCCGGGSCSCCBCSCSSCEEEEEEEEEEEEEEEEEEECSSSCTTT
T ss_pred CcccccCCCeeEECcccCCCCcccCCccccCcCCCCCccccccEecCCCCCCCEEEEECCCceEEeEEEEEeCCCcCccc
Confidence 4689999999999999876 47999999999999999999999999999999999999999999999999999999
Q ss_pred CcccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEE
Q psy11954 93 LQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQ 172 (881)
Q Consensus 93 ~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~ 172 (881)
+.+|+|+||++.+. +...+++|+... ....|.+++|.|..+|+||||||+
T Consensus 87 ~~~~~i~v~~s~~~-----------------------------~~~~n~~~~~~~-~~~~g~~~~i~~~~~~~gRYVrv~ 136 (158)
T 1k12_A 87 ISGAEINIGQHLAS-----------------------------NGVNNPECSVIG-SMATGETKTFHCPAPMIGRYVVTY 136 (158)
T ss_dssp TTTCEEEEESSCTT-----------------------------TTTTSCEEEECC-CCCTTCEEEEEEEEEEEEEEEEEE
T ss_pred cCCEEEEEEcCCcc-----------------------------ccccCceeeeec-ccCCCCEEEEECCCCCeeEEEEEE
Confidence 99999999998542 123466777653 344678899999547999999999
Q ss_pred EecCccceEeeEEEeeccc
Q psy11954 173 LVGVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 173 ~~g~~~~l~l~EveV~g~~ 191 (881)
++++ ..|+||||||||..
T Consensus 137 ~~g~-~~lsl~EveVyg~~ 154 (158)
T 1k12_A 137 LPTS-ESLHLCEVEVNVDK 154 (158)
T ss_dssp CCSS-SCCCEEEEEEEEEE
T ss_pred ECCC-CeEEEEEEEEeccc
Confidence 9997 79999999999974
No 30
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=100.00 E-value=3e-33 Score=269.97 Aligned_cols=141 Identities=25% Similarity=0.319 Sum_probs=122.2
Q ss_pred CcccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCC-CCCCc
Q psy11954 16 FISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCG-HQPLQ 94 (881)
Q Consensus 16 ~~~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~-~~~~~ 94 (881)
+..+.||||||+|+|||+...+.|.+||||+++++|..++|+||..+.+|||+||||+.|.|++|+|+||.||+ .+|+.
T Consensus 6 p~~~~NlA~~k~ataSS~~~~~~a~~AvDG~~~t~w~~~sct~t~~~~~~W~~VDLg~~~~v~~V~i~nr~d~~~~~r~~ 85 (153)
T 4gwi_A 6 PVETENIARGKQASQSSTAHGGAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLGKTENVGKVKLYNRGDGNVANRLS 85 (153)
T ss_dssp CBCSCCTTTTCEEEESCCCTTCCGGGGGSSCCCCCGGGTCCCCCCSBTTCEEEEEEEEEEEEEEEEEEECCSTTCGGGSC
T ss_pred CCCccccCCCCceEEcCCCCCCCcceeEcCCCCCcccccccccCCCCCCCEEEEECCCCEEEEEEEEEcccCCchhhccc
Confidence 34789999999999999998889999999999999999999999999999999999999999999999999998 88999
Q ss_pred ccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEe
Q psy11954 95 DLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLV 174 (881)
Q Consensus 95 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~ 174 (881)
+|+|+|+++.. +.+... .......+...+|.|. +|+||||||+++
T Consensus 86 ~~~I~v~s~dg--------------------------------~~w~~~--~~~~~~~~~~~~i~~~-~~~gRYVrv~~~ 130 (153)
T 4gwi_A 86 NFDVVLLNEAK--------------------------------QEVARQ--HFDSLNGKAELEVFFT-AKDARYVKVELK 130 (153)
T ss_dssp SEEEEEECTTS--------------------------------CEEEEE--EESCCTTCSEEEEEEE-EEEEEEEEEEEC
T ss_pred ceEEEEECCCC--------------------------------Ceeeee--EEecCCCCCEEEEEeC-CceEEEEEEEEE
Confidence 99999987621 111111 1223345678889996 899999999999
Q ss_pred cCccceEeeEEEeeccc
Q psy11954 175 GVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 175 g~~~~l~l~EveV~g~~ 191 (881)
++...|+||||||||.+
T Consensus 131 ~~~~~lsL~EveVyg~~ 147 (153)
T 4gwi_A 131 TKNTPLSLAEVEVFRSA 147 (153)
T ss_dssp SSSBCCCEEEEEEEEBC
T ss_pred cCCCceEEEEEEEECcc
Confidence 98889999999999975
No 31
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.6e-31 Score=276.94 Aligned_cols=172 Identities=24% Similarity=0.506 Sum_probs=149.1
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCCceec-------CCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcC
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSG-------SVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECD 694 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~-------~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~ 694 (881)
.|.+|++|+|+|++||.|.|. .++|+.+|+|+. ..|.|+++.|+.|+.+.||.+......|.+|++|+|+|+
T Consensus 20 ~~~~g~~~~y~C~~Gy~l~g~-~~~C~~~G~Ws~~~~~~~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~ 98 (223)
T 3erb_A 20 GWAPGSLLTYSCPQGLYPSPA-SRLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENGIYTPRLGSYPVGGNVSFECE 98 (223)
T ss_dssp TTSTTCEEEEECCTTEEEESC-EEEECTTSCEECC-------CCEEEECEEECCSCCTTEEEESCCSEEETTCEEEEEEC
T ss_pred CCcCCCEEEEECCCCCeecCC-eeEECCCCeECCCccCCCCCCCeEeeeECcCCCCCCCCEEecCCCCccCCCEEEEEeC
Confidence 577899999999999999995 599999999998 489999999999999999999876566789999999999
Q ss_pred CCceecCCceeeeccCCcccCCCCceee--cccCceeeeecCCeecCCCCcccCCCCCCcc---ccCCCCccCCCeEEE-
Q psy11954 695 ENYRLEGHARRLCLENGTWSSGLPTCKG--NEGHARRLCLENGTWSSGLPTCKGCKTPKKS---LTRPALSCLPGKRFY- 768 (881)
Q Consensus 695 ~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~--~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~~~~~~~~~g~~v~~- 768 (881)
+||.|.|+..++|+++|+|++..|.|+. + .|+.|..+ ......|.+|++++|
T Consensus 99 ~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~----------------------~C~~p~~~~g~~~~~~~~~~g~~v~~~ 156 (223)
T 3erb_A 99 DGFILRGSPVRQCRPNGMWDGETAVCDNGAG----------------------HCPNPGISLGAVRTGFRFGHGDKVRYR 156 (223)
T ss_dssp TTCEEESCSEEEBCTTSCBSSCCCEEECSCS----------------------SSCCCCCCTTEEEECCCCSTTCEEEEE
T ss_pred CCCEEcCCCceEECCCCeECCCCCEEEeCCc----------------------cCcCCCCCCCcEecCCCCCCCCEEEEE
Confidence 9999999999999999999999999997 5 69988765 233567889999999
Q ss_pred ccCCceeeccccCceeEEEEccCCeeecCCCcccc-ccCCCCCCCCCceEEEcc
Q psy11954 769 YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKA-IDCSHPGSIDNGRVIIMN 821 (881)
Q Consensus 769 C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~-v~C~~p~~~~nG~~~~~~ 821 (881)
|+.||+|.|+ .+++|+++|+|++..|+|+. +.|+.|+.+.||..+...
T Consensus 157 C~~Gy~l~G~-----~~~~C~~~G~Ws~~~P~C~~~~~C~~P~~i~~g~~~s~~ 205 (223)
T 3erb_A 157 CSSNLVLTGS-----SERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSFS 205 (223)
T ss_dssp ECTTCEEESC-----SEEEBCTTSCBSSCCCEEECGGGGGCCSSCC--------
T ss_pred eCCCCEEcCC-----CceEECCCCeECCCCCEEeCCccCCCccchhhhHHHHHH
Confidence 9999999999 89999999999999999997 799999999999876543
No 32
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi domain, human complement system, complement second component C2; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=270.19 Aligned_cols=191 Identities=28% Similarity=0.507 Sum_probs=163.1
Q ss_pred CCCCCCCCcceeeEeecccccCCCeEEEECCCCceeeCCceeEeC-CCcccC-------CCCcccccccCCCCCCcceee
Q psy11954 278 ANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCK-EGFWTG-------VAPTCQYFQLQPMDVPNLVLY 349 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G~Ws~-------~~P~C~~~~~~p~~~~~~~~~ 349 (881)
..|+.|+.++||.+.....|.+|++|+|+|++||+|.|. +++|+ +|.|+. ..|.|+.
T Consensus 2 ~~C~~p~~~~nG~~~~~~~~~~g~~~~y~C~~Gy~l~g~-~~~C~~~G~Ws~~~~~~~~~~p~C~~-------------- 66 (223)
T 3erb_A 2 PSCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPA-SRLCKSSGQWQTPGATRSLSKAVCKP-------------- 66 (223)
T ss_dssp -CCCSCCCCBTCEEEESSTTSTTCEEEEECCTTEEEESC-EEEECTTSCEECC-------CCEEEE--------------
T ss_pred CcCcCCCCCCCCEEecCCCCcCCCEEEEECCCCCeecCC-eeEECCCCeECCCccCCCCCCCeEee--------------
Confidence 479999999999998766899999999999999999995 59999 999998 4799998
Q ss_pred eehhhhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecCCCcccCCCCcccc--ccc
Q psy11954 350 LFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLF--DWC 427 (881)
Q Consensus 350 ~~~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~--~~C 427 (881)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|...++|+.+|+|++..|.|+. +.|
T Consensus 67 ---------------~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~~C 131 (223)
T 3erb_A 67 ---------------VRCPAPVSFENGIYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHC 131 (223)
T ss_dssp ---------------CEEECCSCCTTEEEESCCSEEETTCEEEEEECTTCEEESCSEEEBCTTSCBSSCCCEEECSCSSS
T ss_pred ---------------eECcCCCCCCCCEEecCCCCccCCCEEEEEeCCCCEEcCCCceEECCCCeECCCCCEEEeCCccC
Confidence 899999999999998766678999999999999999999999999999999999999997 789
Q ss_pred CCCCCcCCCeEEcCCCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCc
Q psy11954 428 AEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPR 507 (881)
Q Consensus 428 ~~p~~~~ng~~~~~~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~ 507 (881)
+.|. +.+|.+ .. ...|.+|++|+|+|++||.|.|+..
T Consensus 132 ~~p~-~~~g~~-----------------------------------------~~-~~~~~~g~~v~~~C~~Gy~l~G~~~ 168 (223)
T 3erb_A 132 PNPG-ISLGAV-----------------------------------------RT-GFRFGHGDKVRYRCSSNLVLTGSSE 168 (223)
T ss_dssp CCCC-CCTTEE-----------------------------------------EE-CCCCSTTCEEEEEECTTCEEESCSE
T ss_pred cCCC-CCCCcE-----------------------------------------ec-CCCCCCCCEEEEEeCCCCEEcCCCc
Confidence 8764 334432 11 2346789999999999999999999
Q ss_pred eeeccCCcccCCcccccccccccceeccccccccccccCCCCCCCCCeeEE
Q psy11954 508 RSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILS 558 (881)
Q Consensus 508 ~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng~~~ 558 (881)
++|+++|+|++.+|+|+. .+.|+.|+.+.++...
T Consensus 169 ~~C~~~G~Ws~~~P~C~~-----------------~~~C~~P~~i~~g~~~ 202 (223)
T 3erb_A 169 RECQGNGVWSGTEPICRQ-----------------PYSYDFPEDVAPALGT 202 (223)
T ss_dssp EEBCTTSCBSSCCCEEEC-----------------GGGGGCCSSCC-----
T ss_pred eEECCCCeECCCCCEEeC-----------------CccCCCccchhhhHHH
Confidence 999999999999999992 3689999998888643
No 33
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=99.97 E-value=1.5e-30 Score=252.80 Aligned_cols=139 Identities=24% Similarity=0.315 Sum_probs=118.5
Q ss_pred ccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCccc
Q psy11954 18 SGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDL 96 (881)
Q Consensus 18 ~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~ 96 (881)
.+.||||||+|+|||+...+.|.+||||+++++|..++|+||..+.+|||+||||+.|.|++|+|+||.|| +.+|+.+|
T Consensus 8 ~~~NlA~~k~ataSS~~~~~~a~~AvDG~~~t~W~~~~ct~t~~~~~~W~~VDLg~~~~v~~V~i~~~~d~~~~~r~~~~ 87 (153)
T 3lei_A 8 ETENIARGKQASQSSTAYGGAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLGKTENVGKVKLYNRGDGNVANRLSNF 87 (153)
T ss_dssp CSCCTTTTCEEEESCCCTTCCGGGGGSSCCCCCGGGTCSCCCCSBTTCEEEEEEEEEEEEEEEEEEECCSTTCGGGSCSE
T ss_pred CCcccCCCCCeeECCCcCCCCccccccCCCCCccccCccccCCCCCCCeEEEECCCceEEeEEEEEeCCCCcccccceeE
Confidence 57999999999999999888999999999999999999999999999999999999999999999999987 78899999
Q ss_pred EEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC
Q psy11954 97 EIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV 176 (881)
Q Consensus 97 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~ 176 (881)
+|+|+++.. +..+.........+..+++.|. ++.||||||+++++
T Consensus 88 ~I~vs~~dg----------------------------------~~w~~~~~~~~~~~~~~~~~~~-~~~~RYVri~~~~~ 132 (153)
T 3lei_A 88 DVVLLNEAK----------------------------------QEVARQHFDSLNGKAELEVFFT-AKDARYVKVELKTK 132 (153)
T ss_dssp EEEEECTTC----------------------------------CEEEEEEESCCTTCSEEEEEEE-EEEEEEEEEEECST
T ss_pred EEEEECCCC----------------------------------CccccceeecCCCCCeEEEEeC-CeEEEEEEEEeeCC
Confidence 999997621 0111111112233456778885 79999999999998
Q ss_pred ccceEeeEEEeeccc
Q psy11954 177 EGSLSLCEVEIFTTD 191 (881)
Q Consensus 177 ~~~l~l~EveV~g~~ 191 (881)
...|+|+||||||..
T Consensus 133 ~~~~sl~EveVyg~~ 147 (153)
T 3lei_A 133 NTPLSLAEVEVFRSA 147 (153)
T ss_dssp TBCCCEEEEEEEEBC
T ss_pred CCcEEEEEEEEEcCc
Confidence 779999999999975
No 34
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=99.95 E-value=3.7e-29 Score=270.24 Aligned_cols=160 Identities=31% Similarity=0.507 Sum_probs=137.7
Q ss_pred ccccccCCCCceeccCCCC-CC-CCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcc
Q psy11954 18 SGTNVALRRPTNQSSTIRG-AP-SSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQD 95 (881)
Q Consensus 18 ~~~nlA~~k~a~qSS~~~~-~~-a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~ 95 (881)
.+.||||||+|+|||++.. +. |++||||+++++|.+++|+||..+.+|||+||||++|.|++|+|+||.||+++|+.+
T Consensus 2 ~~~NlA~~k~a~aSS~~~~~~~~a~~AvDG~~~t~W~s~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~r~d~~~~~~~~ 81 (293)
T 3cqo_A 2 NYKNVALRGKATQSARYLHTHGAAYNAIDGNRNSDFEAGSCTHTVEQTNPWWRVDLLEPYIVTSITITNRGDCCPERLNG 81 (293)
T ss_dssp CCEEGGGGSEEEESSBCSSTTCCGGGGGSSCCCCCGGGSCSCCBCSBSSCEEEEEEEEEEEEEEEEEECCSSSCGGGGTT
T ss_pred CCcccCCCCceeECcCCCCCCCCcCccccCCCCCccCCCceecCCCCCCCEEEEECCCceEEEEEEEEeCCCCccccccC
Confidence 3589999999999999876 56 999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec
Q psy11954 96 LEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG 175 (881)
Q Consensus 96 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g 175 (881)
|+|+|+++.+. ....+++|+... ....|...++.|.+++.||||||++++
T Consensus 82 ~~i~v~~s~d~-----------------------------~~~~n~~~~~~~-~~~~g~~~~~~~~~~~~gRYVrv~~~~ 131 (293)
T 3cqo_A 82 VEIHIGNSLQE-----------------------------NGVANPRVGVIS-HIPAGISHTISFTERVEGRYVTVLLPG 131 (293)
T ss_dssp EEEEEESCCGG-----------------------------GGTTSCEEEEES-CCCTTCEEEEECSSCCEEEEEEEECCS
T ss_pred eEEEEecCCcc-----------------------------CCccCceeccee-ecCCCceEEEEeCCCceeeEEEEEecC
Confidence 99999998542 112356676543 345677899999668999999999999
Q ss_pred CccceEeeEEEeeccc----chhhhhccccccceEE
Q psy11954 176 VEGSLSLCEVEIFTTD----GELERRKDRLKTLLVW 207 (881)
Q Consensus 176 ~~~~l~l~EveV~g~~----~~l~~r~~~~~~~~~W 207 (881)
....|+||||||||.+ .+|++.+...+++.++
T Consensus 132 ~~~~~sl~EveVyg~~~~~~~nlA~~k~~taSS~~~ 167 (293)
T 3cqo_A 132 TNKVLTLCEVEVHGYRAPTGENLALKGKATQSSLFE 167 (293)
T ss_dssp SSBCCCCSEEEEEEEECCCSSCGGGGSEEEESCCCT
T ss_pred CCcceEEEEEEEEeccCCCCccccCCcceecCCCCC
Confidence 8779999999999974 5888888877776553
No 35
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.1e-28 Score=245.48 Aligned_cols=174 Identities=25% Similarity=0.578 Sum_probs=146.8
Q ss_pred eecCCCCCCCCCCceeec-cCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceecccccccccc
Q psy11954 465 NIDCGRLTAIPYGSISYL-NETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRRE 543 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~~-~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~ 543 (881)
.+.|++|+.+.||.+... ...|.+|++|+|+|++||.|.|+..++|+ +|+|+. +|+|+ .
T Consensus 2 ~v~C~~pp~~~ng~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~-~p~C~------------------~ 61 (188)
T 3sw0_X 2 GTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTE-PPQCK------------------D 61 (188)
T ss_dssp CCCBCSCCCCTTEEECSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEE------------------C
T ss_pred cCcCcCCCCCCCCEEecccCCcccCCCEEEEECCCCCEECCCCEEEeC-CCEeCC-CCccC------------------c
Confidence 378999999999998764 34688999999999999999999999999 999996 69999 5
Q ss_pred c--cCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcc
Q psy11954 544 I--RCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVA 621 (881)
Q Consensus 544 i--~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (881)
+ .|+.|+.+.||.+... ...
T Consensus 62 ~~~~C~~p~~~~ng~~~~~----------------------------------------------------------~~~ 83 (188)
T 3sw0_X 62 STGKCGPPPPIDNGDITSF----------------------------------------------------------PLS 83 (188)
T ss_dssp TTCCBCSCCCCTTEEESSC----------------------------------------------------------CCS
T ss_pred CCCcCCCCCccCCCeEecC----------------------------------------------------------CCC
Confidence 5 8999999999875310 124
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCc---eEEec--CCCe-ecCcEEEEEcCC
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNG---GFTLT--SNAT-YYGTAVLYECDE 695 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG---~~~~~--~~~~-~~g~~v~y~C~~ 695 (881)
.|.+|++|+|+|++||.|.|+..++|+ +|+|+. .|.|++ .|+.|+.+.++ .+... ...| .+|++|+|+|++
T Consensus 84 ~~~~g~~v~~~C~~Gy~l~G~~~~~C~-~G~Ws~-~P~C~~-~C~~p~~~~~~~~~~~~~~~~~~~y~~~g~~v~~~C~~ 160 (188)
T 3sw0_X 84 VYAPASSVEYQCQNLYQLEGNKRITCR-NGQWSE-PPKCLH-PCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKR 160 (188)
T ss_dssp CBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEEC-CEECCHHHHHHHTEEESCCSSCCCEECTTCEEEEEECT
T ss_pred cccCCCEEEEEcCCCCEECCCCeEEcC-CCccCC-CCcccc-cCCCChHHhccCceeeeccccccccccCCCEEEEECCC
Confidence 688999999999999999999999999 999998 699997 89988777643 22221 2333 479999999999
Q ss_pred CceecCCc---eeeeccCCcccCCCCceee
Q psy11954 696 NYRLEGHA---RRLCLENGTWSSGLPTCKG 722 (881)
Q Consensus 696 Gy~L~G~~---~~~C~~~G~Ws~~~P~C~~ 722 (881)
||+|.|+. .++|+ +|+| ..|+|+.
T Consensus 161 Gy~l~G~~~~~~~~C~-~g~w--~~P~C~~ 187 (188)
T 3sw0_X 161 GYRLSSRSHTLRTTCW-DGKL--EYPTCAK 187 (188)
T ss_dssp TCEECTTCCCSEEECB-TTBC--CCCCEEC
T ss_pred CceeCCCCCCeEeEcC-CCcE--eCCceec
Confidence 99999998 99999 8999 4899974
No 36
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.95 E-value=2.7e-28 Score=245.38 Aligned_cols=170 Identities=24% Similarity=0.514 Sum_probs=143.0
Q ss_pred ecCCCCCCCCCCceeecc---Cc--eecCcEEEEEcCCCcEEcCCC---ceeeccCCcccCCcccccccccccceecccc
Q psy11954 466 IDCGRLTAIPYGSISYLN---ET--TYLGSEVLYSCSRNYRLVGHP---RRSCLESKVWSDTAPKCEGKATKDIKVCSNV 537 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~~~---~~--~~~gs~v~y~C~~Gy~L~G~~---~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~ 537 (881)
+.|+. |.+.||.+.... .. +.+|++|+|+|++||.|.|.. .++|+++| |++.+| |+
T Consensus 4 ~~C~~-P~~~nG~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~~~-C~------------- 67 (187)
T 2uwn_A 4 KPCDY-PDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVP-CL------------- 67 (187)
T ss_dssp CCBCC-CCCTTEEETTHHHHTTTCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EESSSC-CE-------------
T ss_pred cCCCC-CccccceEeccccccccccccCCCEEEEECCCCcEecCCccCCEEEeCCCC-CCCCCC-cC-------------
Confidence 57976 578999997642 22 358999999999999999985 89999999 998666 98
Q ss_pred ccccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCC
Q psy11954 538 AVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSA 617 (881)
Q Consensus 538 ~~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (881)
+ .|+.| .+.||.+.
T Consensus 68 -----~-~C~~p-~~~ng~~~----------------------------------------------------------- 81 (187)
T 2uwn_A 68 -----R-KCYFP-YLENGYNQ----------------------------------------------------------- 81 (187)
T ss_dssp -----E-EEECC-CCTTEECS-----------------------------------------------------------
T ss_pred -----C-cCcCC-CCCccEEc-----------------------------------------------------------
Confidence 5 88875 46777541
Q ss_pred CCcccccCCCEEEEEcCCCCeec-CCCceEecCCCceecCCCeeecc-cCCC-CCCCCCceEEecCCCeecCcEEEEEcC
Q psy11954 618 SSVATYKIGALVKYRCERGYKVE-GEPLSTCEDTGSWSGSVPECIYV-DCGN-PETVPNGGFTLTSNATYYGTAVLYECD 694 (881)
Q Consensus 618 ~~~~~~~~Gs~v~~~C~~GY~l~-G~~~~tC~~~G~Ws~~~P~C~~v-~C~~-p~~~~nG~~~~~~~~~~~g~~v~y~C~ 694 (881)
.....|.+|++|+|+|++||.|. |+..++|+++| |++ .|.|+++ .|+. |+.+.||.+......|.+|++|+|+|+
T Consensus 82 ~~~~~~~~g~~v~~~C~~Gy~l~~G~~~~~C~~~g-Ws~-~P~C~~v~~C~~~p~~~~nG~~~~~~~~y~~g~~v~~~C~ 159 (187)
T 2uwn_A 82 NHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENG-WSP-TPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCK 159 (187)
T ss_dssp CTTCEEETTCEEECEECTTEECSSSCSEEEEETTE-EES-CSCCEECCEEEGGGCCCSSEECCSCCSEEETTCEEEEEEC
T ss_pred CCCccccCCCEEEEEcCCCCCccCCCeEEEecCCC-cCC-CCceeecccCCCCCccccCceEcCCCccCcCCCEEEEECC
Confidence 11246889999999999999997 99999999999 998 6999998 8998 588999988654455668999999999
Q ss_pred CCceecCC---ceeeeccCCcccCCCCcee
Q psy11954 695 ENYRLEGH---ARRLCLENGTWSSGLPTCK 721 (881)
Q Consensus 695 ~Gy~L~G~---~~~~C~~~G~Ws~~~P~C~ 721 (881)
+||.|.|. ..++|+++| |++ +|+|+
T Consensus 160 ~Gy~l~g~~~s~~~~C~~~g-Ws~-~P~Ci 187 (187)
T 2uwn_A 160 LGYVTADGETSGSITCGKDG-WSA-QPTCI 187 (187)
T ss_dssp TTCCCSSSCSEEEEEEETTE-ESC-CCCCC
T ss_pred CCCEecCCCCcCeEEECCCC-cCC-CCccC
Confidence 99999995 899999999 999 89984
No 37
>2uwn_A H factor 1, human complement factor H; alternative splicing, sucrose octasulphate, AGE-related macular degeneration, complement alternate pathway; HET: SCR; 2.35A {Homo sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.95 E-value=4.3e-28 Score=243.91 Aligned_cols=166 Identities=26% Similarity=0.491 Sum_probs=138.5
Q ss_pred cccCCCCCCCCCceEEec---CCC--eecCcEEEEEcCCCceecCC---ceeeeccCCcccCCCCceeecccCceeeeec
Q psy11954 662 YVDCGNPETVPNGGFTLT---SNA--TYYGTAVLYECDENYRLEGH---ARRLCLENGTWSSGLPTCKGNEGHARRLCLE 733 (881)
Q Consensus 662 ~v~C~~p~~~~nG~~~~~---~~~--~~~g~~v~y~C~~Gy~L~G~---~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~ 733 (881)
++.|+.| .+.||.+... ... +.+|++|+|+|++||.|.|. ..++|+++| |++.+| |+..
T Consensus 3 ~~~C~~P-~~~nG~~~~~~~~~~~~~~~~g~~~~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~~~-C~~~---------- 69 (187)
T 2uwn_A 3 LKPCDYP-DIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVP-CLRK---------- 69 (187)
T ss_dssp CCCBCCC-CCTTEEETTHHHHTTTCSBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EESSSC-CEEE----------
T ss_pred ccCCCCC-ccccceEeccccccccccccCCCEEEEECCCCcEecCCccCCEEEeCCCC-CCCCCC-cCCc----------
Confidence 4578876 5899998653 122 35899999999999999998 499999999 998766 9864
Q ss_pred CCeecCCCCcccCCCCCCcc---c-cCCCCccCCCeEEE-ccCCceee-ccccCceeEEEEccCCeeecCCCccccc-cC
Q psy11954 734 NGTWSSGLPTCKGCKTPKKS---L-TRPALSCLPGKRFY-YHRGIFRL-QNTQKVSYTRTCTKRGTWSGHIPTCKAI-DC 806 (881)
Q Consensus 734 ~g~ws~~~p~C~~C~~p~~~---~-~~~~~~~~g~~v~~-C~~Gy~l~-G~~~~~~~~~~C~~~G~Ws~~~p~C~~v-~C 806 (881)
|+.|... + .....|.+|++++| |++||.|. |+ .+++|+++| |++ .|.|+.+ .|
T Consensus 70 -------------C~~p~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~G~-----~~~~C~~~g-Ws~-~P~C~~v~~C 129 (187)
T 2uwn_A 70 -------------CYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQ-----TTVTCMENG-WSP-TPRCIRVKTC 129 (187)
T ss_dssp -------------EECCCCTTEECSCTTCEEETTCEEECEECTTEECSSSC-----SEEEEETTE-EES-CSCCEECCEE
T ss_pred -------------CcCCCCCccEEcCCCccccCCCEEEEEcCCCCCccCCC-----eEEEecCCC-cCC-CCceeecccC
Confidence 7765433 1 12346788999999 99999997 88 899999999 998 6999998 99
Q ss_pred CC-CCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCC---CeeEeCCCCeecCCCCcee
Q psy11954 807 SH-PGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGP---YLRKCMEDGSWSGDEPRCE 862 (881)
Q Consensus 807 ~~-p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~---~~~~C~~~G~Ws~~~P~C~ 862 (881)
+. |+.+.||.+......|.+|++|+|+|++||.|.|. ..++|+++| |++ +|+|+
T Consensus 130 ~~~p~~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~g~~~s~~~~C~~~g-Ws~-~P~Ci 187 (187)
T 2uwn_A 130 SKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDG-WSA-QPTCI 187 (187)
T ss_dssp EGGGCCCSSEECCSCCSEEETTCEEEEEECTTCCCSSSCSEEEEEEETTE-ESC-CCCCC
T ss_pred CCCCccccCceEcCCCccCcCCCEEEEECCCCCEecCCCCcCeEEECCCC-cCC-CCccC
Confidence 99 58899998865445567899999999999999995 899999999 999 89995
No 38
>3sw0_X H factor 1, complement factor H; innate immune response, sushi domains, cofactor in the inact of C3B, C3B, human plasma, immune system; 1.80A {Homo sapiens}
Probab=99.94 E-value=2.3e-27 Score=239.03 Aligned_cols=169 Identities=27% Similarity=0.493 Sum_probs=139.8
Q ss_pred cccCCCCCCCCCceEEec-CCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeecccCceeeeecCCeecCC
Q psy11954 662 YVDCGNPETVPNGGFTLT-SNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSG 740 (881)
Q Consensus 662 ~v~C~~p~~~~nG~~~~~-~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~ 740 (881)
++.|+.|+.+.||.+... ...|.+|++|+|+|++||.|.|+.+++|+ +|+|++ +|+|+.+..
T Consensus 2 ~v~C~~pp~~~ng~~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~-~g~Ws~-~p~C~~~~~--------------- 64 (188)
T 3sw0_X 2 GTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTE-PPQCKDSTG--------------- 64 (188)
T ss_dssp CCCBCSCCCCTTEEECSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEECC-CCEEECTTC---------------
T ss_pred cCcCcCCCCCCCCEEecccCCcccCCCEEEEECCCCCEECCCCEEEeC-CCEeCC-CCccCcCCC---------------
Confidence 468999999999998763 34577999999999999999999999999 999996 699997400
Q ss_pred CCcccCCCCCCcc----cc--CCCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCC
Q psy11954 741 LPTCKGCKTPKKS----LT--RPALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSID 813 (881)
Q Consensus 741 ~p~C~~C~~p~~~----~~--~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~ 813 (881)
.|+.|+.+ +. ....|.+|+.++| |+.||.|.|+ .+++|+ +|+|++ .|.|+. .|+.|+.+.
T Consensus 65 -----~C~~p~~~~ng~~~~~~~~~~~~g~~v~~~C~~Gy~l~G~-----~~~~C~-~G~Ws~-~P~C~~-~C~~p~~~~ 131 (188)
T 3sw0_X 65 -----KCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGN-----KRITCR-NGQWSE-PPKCLH-PCVISREIM 131 (188)
T ss_dssp -----CBCSCCCCTTEEESSCCCSCBCTTCEEEEEECTTCEEESC-----SEEEEE-TTEECC-CCEEEC-CEECCHHHH
T ss_pred -----cCCCCCccCCCeEecCCCCcccCCCEEEEEcCCCCEECCC-----CeEEcC-CCccCC-CCcccc-cCCCChHHh
Confidence 48877655 11 2356889999999 9999999999 899999 999998 699997 899998776
Q ss_pred Cc-eEE--Ec--cCcc-cCCCEEEEEcCCCCEEcCCC---eeEeCCCCeecCCCCceec
Q psy11954 814 NG-RVI--IM--NQTT-TYNSAVEYHCVPQYQRIGPY---LRKCMEDGSWSGDEPRCEK 863 (881)
Q Consensus 814 nG-~~~--~~--~~~~-~~g~~v~f~C~~Gy~l~G~~---~~~C~~~G~Ws~~~P~C~~ 863 (881)
|| .+. .. ...+ .+|++|+|+|++||.|.|+. .++|+ +|+| .+|+|++
T Consensus 132 ~~~~~~~~~~~~~~~y~~~g~~v~~~C~~Gy~l~G~~~~~~~~C~-~g~w--~~P~C~~ 187 (188)
T 3sw0_X 132 ENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--EYPTCAK 187 (188)
T ss_dssp HHHTEEESCCSSCCCEECTTCEEEEEECTTCEECTTCCCSEEECB-TTBC--CCCCEEC
T ss_pred ccCceeeeccccccccccCCCEEEEECCCCceeCCCCCCeEeEcC-CCcE--eCCceec
Confidence 54 222 11 1223 57999999999999999998 99998 8999 4799986
No 39
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.94 E-value=8.7e-27 Score=285.11 Aligned_cols=169 Identities=27% Similarity=0.542 Sum_probs=152.7
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCCceecC---------CCeeecccCCCCCCCCCceEEecCCCeecCcEEEEE
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGS---------VPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYE 692 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~---------~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~ 692 (881)
.|.+|++|+|+|++||.|.|+.+++|+.+|+|+.. .|.|+++.|+.|+.+.||.+......|.+|++|+|+
T Consensus 26 ~~~~g~~~~y~C~~Gy~l~g~~~~~C~~~g~Ws~~~~~~~~~~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~g~~~~~~ 105 (741)
T 3hrz_D 26 LLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFH 105 (741)
T ss_dssp EEGGGTEEEEECCTTEEEESCSEEEBCTTSCBCCEECTTCCEESCCEEEECEECCCSCCTTEEEECCCSSEETTCEEEEE
T ss_pred eccCCCEEEEEeCCCCEECCCCeEEECCCCcCCCCCcccccCcCCCeEEeeECcCCCCCCCCEEeccCCCcccCCEEEEE
Confidence 35689999999999999999999999999999985 899999999999999999998776778899999999
Q ss_pred cCCCceecCCceeeeccCCcccCCCCceee--cccCceeeeecCCeecCCCCcccCCCCCCcc---ccCCCCccCCCeEE
Q psy11954 693 CDENYRLEGHARRLCLENGTWSSGLPTCKG--NEGHARRLCLENGTWSSGLPTCKGCKTPKKS---LTRPALSCLPGKRF 767 (881)
Q Consensus 693 C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~--~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~~~~~~~~~g~~v~ 767 (881)
|++||.|.|+.+++|+.+|+|+++.|.|+. + .|+.|..+ ......|.+|++|+
T Consensus 106 C~~Gy~l~G~~~~~C~~~g~Ws~~~p~C~~~~~----------------------~C~~p~~~~~~~~~~~~~~~g~~v~ 163 (741)
T 3hrz_D 106 CYDGYTLRGSANRTCQVNGRWSGQTAICDNGAG----------------------YCSNPGIPIGTRKVGSQYRLEDSVT 163 (741)
T ss_dssp ECTTCEEESCSEEEBCTTSCBSSCCCEEECSCS----------------------SSCCCCCCTTEEEECCCCSTTCEEE
T ss_pred ECCCCccCCCcceEecCCCeEccCcCeeeccCC----------------------cCCCCCCCCCCeeeCCccccCCEEE
Confidence 999999999999999999999999999996 4 69988776 23445689999999
Q ss_pred E-ccCCceeeccccCceeEEEEccCCeeecCCCcccc-ccCCCCCCCCCceE
Q psy11954 768 Y-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKA-IDCSHPGSIDNGRV 817 (881)
Q Consensus 768 ~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~-v~C~~p~~~~nG~~ 817 (881)
| |+.||.|.|+ .+++|+++|+|++..|+|+. ..|+.|+.+.+|..
T Consensus 164 ~~C~~gy~l~G~-----~~~~C~~~g~Ws~~~p~C~~~~~c~~p~~i~~~~~ 210 (741)
T 3hrz_D 164 YHCSRGLTLRGS-----QRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFL 210 (741)
T ss_dssp EEECTTSEEESC-----SEEEBCTTSSBSSCCCEEECTTCCBCHHHHHHHHH
T ss_pred EEcCCCCEEcCC-----CeEEECCCCEEeCCCccccCCCcCCCCcccccccc
Confidence 9 9999999999 99999999999999999997 58998887777653
No 40
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.94 E-value=2.3e-26 Score=281.37 Aligned_cols=175 Identities=27% Similarity=0.518 Sum_probs=149.8
Q ss_pred CeeecccCC-CCCCCCCceEEecCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCC---------CCceeecccCc
Q psy11954 658 PECIYVDCG-NPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSG---------LPTCKGNEGHA 727 (881)
Q Consensus 658 P~C~~v~C~-~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~---------~P~C~~~~g~~ 727 (881)
..|.++.|+ +|+.+.||.+.. +.+|++|+|+|++||.|.|+.+++|+.+|+|++. .|.|+.+
T Consensus 5 ~~c~~~~C~~~~~~~~~g~~~~----~~~g~~~~y~C~~Gy~l~g~~~~~C~~~g~Ws~~~~~~~~~~~~p~C~~~---- 76 (741)
T 3hrz_D 5 LARPQGSCSLEGVEIKGGSFRL----LQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAI---- 76 (741)
T ss_dssp ------CCCCTTCCCBTSEEEE----EGGGTEEEEECCTTEEEESCSEEEBCTTSCBCCEECTTCCEESCCEEEEC----
T ss_pred ccCCCCCCCCCCccCCCCeeee----ccCCCEEEEEeCCCCEECCCCeEEECCCCcCCCCCcccccCcCCCeEEee----
Confidence 468889999 777889998864 4589999999999999999999999999999985 6777776
Q ss_pred eeeeecCCeecCCCCcccCCCCCCcc-----ccCCCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCcc
Q psy11954 728 RRLCLENGTWSSGLPTCKGCKTPKKS-----LTRPALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTC 801 (881)
Q Consensus 728 ~~~C~~~g~ws~~~p~C~~C~~p~~~-----~~~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C 801 (881)
.|+.|+.+ ......|.+|++++| |++||.|.|+ .+++|+.+|+|++..|.|
T Consensus 77 ------------------~C~~p~~~~ng~~~~~~~~~~~g~~~~~~C~~Gy~l~G~-----~~~~C~~~g~Ws~~~p~C 133 (741)
T 3hrz_D 77 ------------------HCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGS-----ANRTCQVNGRWSGQTAIC 133 (741)
T ss_dssp ------------------EECCCSCCTTEEEECCCSSEETTCEEEEEECTTCEEESC-----SEEEBCTTSCBSSCCCEE
T ss_pred ------------------ECcCCCCCCCCEEeccCCCcccCCEEEEEECCCCccCCC-----cceEecCCCeEccCcCee
Confidence 79988766 123456889999999 9999999999 899999999999999999
Q ss_pred cc--ccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCeeEeCCCCeecCCCCceeccC
Q psy11954 802 KA--IDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRF 865 (881)
Q Consensus 802 ~~--v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~ 865 (881)
+. +.|+.|+.+.|+.+.. ..+.||++|+|+|++||.|.|+.+++|+++|+|++.+|+|+++.
T Consensus 134 ~~~~~~C~~p~~~~~~~~~~--~~~~~g~~v~~~C~~gy~l~G~~~~~C~~~g~Ws~~~p~C~~~~ 197 (741)
T 3hrz_D 134 DNGAGYCSNPGIPIGTRKVG--SQYRLEDSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSF 197 (741)
T ss_dssp ECSCSSSCCCCCCTTEEEEC--CCCSTTCEEEEEECTTSEEESCSEEEBCTTSSBSSCCCEEECTT
T ss_pred eccCCcCCCCCCCCCCeeeC--CccccCCEEEEEcCCCCEEcCCCeEEECCCCEEeCCCccccCCC
Confidence 97 8999998887776543 34889999999999999999999999999999999999999953
No 41
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=99.93 E-value=1.1e-26 Score=250.90 Aligned_cols=141 Identities=33% Similarity=0.567 Sum_probs=123.8
Q ss_pred cccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEE
Q psy11954 19 GTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEI 98 (881)
Q Consensus 19 ~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i 98 (881)
+.|||++|+++|||++..+.|.+||||+++++|.+++|+||..+.+|||+||||+.+.|++|+|++| ||+.+|+..|+|
T Consensus 151 ~~nlA~~k~~taSS~~~~~~a~~AvDG~~~t~W~~~~c~~t~~~~~~W~~VDLg~~~~v~~V~i~~~-d~~~~~~~~~~i 229 (293)
T 3cqo_A 151 GENLALKGKATQSSLFESGIAYNAIDGNQANNWEMASCTHTKNTMDPWWRMDLSQTHRVFSVKVTNR-DSFEKRINGAEI 229 (293)
T ss_dssp SSCGGGGSEEEESCCCTTCCGGGGGSSCCCCSGGGTCCCCCCSEESCEEEEEEEEEEEEEEEEEECC-SSSGGGGTTEEE
T ss_pred CccccCCcceecCCCCCCCCccccccCCCCCccccCccccCCCCCCCEEEEECCCeEEEeEEEEEcc-CccccccCCeEE
Confidence 5799999999999999888999999999999999999999999999999999999999999999999 888899999999
Q ss_pred EEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCcc
Q psy11954 99 RVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEG 178 (881)
Q Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~ 178 (881)
+|+++.+. ++..|+.|+.+.. ...+..++|.|. ++.||||||+++++..
T Consensus 230 ~vs~s~~~-----------------------------~~~~n~~~~~~~~-~~~~~~~~~~~~-~~~~RYVrv~~~~~~~ 278 (293)
T 3cqo_A 230 RIGDSLDN-----------------------------NGNHNPRCAVITS-IPAGASTEFQCN-GMDGRYVNIVIPGREE 278 (293)
T ss_dssp EEESCCGG-----------------------------GGTTSCEEEEECC-CCTTCEEEEEEE-EEEEEEEEEECTTSEE
T ss_pred EEeccCcc-----------------------------ccccCceeeeecc-cCCCCEEEEEcC-CeeEEEEEEEecCCCc
Confidence 99987441 1134556665543 345778999885 7999999999998777
Q ss_pred ceEeeEEEeeccc
Q psy11954 179 SLSLCEVEIFTTD 191 (881)
Q Consensus 179 ~l~l~EveV~g~~ 191 (881)
.|+|+||||||.+
T Consensus 279 ~~sl~EveVyg~~ 291 (293)
T 3cqo_A 279 YLTLCEVEVYGSV 291 (293)
T ss_dssp CCCCSEEEEEEEC
T ss_pred cEEEEEEEEeccC
Confidence 8999999999975
No 42
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.90 E-value=3.1e-24 Score=264.25 Aligned_cols=200 Identities=17% Similarity=0.237 Sum_probs=148.4
Q ss_pred CEEEEEcCCCCeecCCCceEecCCC----ceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceecCC
Q psy11954 627 ALVKYRCERGYKVEGEPLSTCEDTG----SWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGH 702 (881)
Q Consensus 627 s~v~~~C~~GY~l~G~~~~tC~~~G----~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~ 702 (881)
....+.| ||.|.|...++|+.+| .|+.+.|.|+. .|+.|+.+.||.+......|.+|++|+|+|++||.|.|.
T Consensus 584 ~~~~~~C--gy~L~G~~~~~C~~~g~~~~~Ws~~~P~C~~-~C~~p~~~~nG~~~~~~~~y~~g~~v~y~C~~Gy~L~G~ 660 (913)
T 3t5o_A 584 KRQEEDC--TFSIMENNGQPCINDDEEMKEVDLPEIEADS-GCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGY 660 (913)
T ss_dssp SEEEEEC--C---------CCCCCCCC-----------CC-CBCCCCCCTTEEESCCCSCBCTTCEEEEEECTTEEEESC
T ss_pred ceEEEEC--CCcccccccceEeCCCCccccCCCCCCCCcC-cCCCCCCCCCceEecCCCceecccEEEEEeCCCCEECCC
Confidence 3556889 9999999999999987 89999999998 999999999999986556678999999999999999999
Q ss_pred ceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcc---cc--CCCCccCCCeEEE-ccCCceee
Q psy11954 703 ARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKS---LT--RPALSCLPGKRFY-YHRGIFRL 776 (881)
Q Consensus 703 ~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~---~~--~~~~~~~g~~v~~-C~~Gy~l~ 776 (881)
..++|+++|+|++++|+|+.+ .|+.|+.+ .+ ....|.+|++|+| |++||.|.
T Consensus 661 ~~~~C~~~G~Ws~~~P~C~~v----------------------~C~~P~~~~~~~~~~~~~~y~~gs~v~y~C~~Gy~l~ 718 (913)
T 3t5o_A 661 QYFRCLPDGTWRQGDVECQRT----------------------ECIKPVVQEVLTITPFQRLYRIGESIELTCPKGFVVA 718 (913)
T ss_dssp CEEEECTTSCEECCSCEEEEC----------------------EEECCCCCSSSBCSSCCSEEETTCEEECBCCTTCEES
T ss_pred CceEECCCCeEcCCCCeeccC----------------------cCCCCCCCCCcEecCCCCcccCCCEEEEEeCCCCEEC
Confidence 999999999999999999998 69988776 11 2345788999999 99999999
Q ss_pred ccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCC-CeeEeCCCCe--
Q psy11954 777 QNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGP-YLRKCMEDGS-- 853 (881)
Q Consensus 777 G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~-~~~~C~~~G~-- 853 (881)
|+ .+++|+++ +|++++|. .+.|.+++.+..+. .+......+++++ .|..+|++-|. ...+|..||.
T Consensus 719 G~-----~~~~C~~~-~Ws~~~P~--~i~C~~~~~~~~~~-~C~~g~~~~~s~C--~C~~p~~~c~~~~~~~C~~~~~~~ 787 (913)
T 3t5o_A 719 GP-----SRYTCQGN-SWTPPISN--SLTCEKDTLTKLKG-HCQLGQKQSGSEC--ICMSPEEDCSHHSEDLCVFDTDSN 787 (913)
T ss_dssp SC-----SEEECBTT-BCSCCCTT--SCCEECCC-----C-TTTTTEECSTTSC--EECCHHHHCCSCCSEEEEEETTTT
T ss_pred CC-----CceEECCC-EeeCCCCe--eeECcCCCCCCCCC-CCCCCcccCCCce--EECChhhcCCCCCCCeeccCCCCc
Confidence 99 99999998 99998885 56898876554431 2222334557766 89999998887 8889998875
Q ss_pred ecCCCCcee
Q psy11954 854 WSGDEPRCE 862 (881)
Q Consensus 854 Ws~~~P~C~ 862 (881)
|.-.++.|+
T Consensus 788 ~~~~~~~C~ 796 (913)
T 3t5o_A 788 DYFTSPACK 796 (913)
T ss_dssp EEEEEEHHH
T ss_pred eeecccHHH
Confidence 877778884
No 43
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=99.90 E-value=8.1e-24 Score=260.51 Aligned_cols=225 Identities=16% Similarity=0.311 Sum_probs=156.8
Q ss_pred ecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeeccCC----cccCCcccccccccccceecccccccc
Q psy11954 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK----VWSDTAPKCEGKATKDIKVCSNVAVDR 541 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G----~Ws~~~P~C~~~~~~~~~~~~~~~~~~ 541 (881)
..|..|+...+| ..+.. .+..++.| ||.|.|...++|+.+| .|+.++|.|+
T Consensus 566 R~C~nP~P~~GG-~~C~G-----~~~~~~~C--gy~L~G~~~~~C~~~g~~~~~Ws~~~P~C~----------------- 620 (913)
T 3t5o_A 566 RECNNPAPQRGG-KRCEG-----EKRQEEDC--TFSIMENNGQPCINDDEEMKEVDLPEIEAD----------------- 620 (913)
T ss_dssp CCSCSSCCBSSC-CCCCS-----CSEEEEEC--C---------CCCCCCCC-----------C-----------------
T ss_pred cccCCCCcccCC-cccCC-----CceEEEEC--CCcccccccceEeCCCCccccCCCCCCCCc-----------------
Confidence 356665543333 33322 24567899 9999999999999987 8999999999
Q ss_pred ccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcc
Q psy11954 542 REIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVA 621 (881)
Q Consensus 542 ~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (881)
. .|+.|+.+.||.+.. ...
T Consensus 621 -~-~C~~p~~~~nG~~~~-----------------------------------------------------------~~~ 639 (913)
T 3t5o_A 621 -S-GCPQPVPPENGFIRN-----------------------------------------------------------EKQ 639 (913)
T ss_dssp -C-CBCCCCCCTTEEESC-----------------------------------------------------------CCS
T ss_pred -C-cCCCCCCCCCceEec-----------------------------------------------------------CCC
Confidence 5 899999999997531 124
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceecC
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEG 701 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G 701 (881)
.|.+|++|+|+|++||.|.|+..++|+++|+|+++.|.|+++.|+.|+.+.|+.+......|.+|++|+|+|++||.|.|
T Consensus 640 ~y~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~v~C~~P~~~~~~~~~~~~~~y~~gs~v~y~C~~Gy~l~G 719 (913)
T 3t5o_A 640 LYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQRLYRIGESIELTCPKGFVVAG 719 (913)
T ss_dssp CBCTTCEEEEEECTTEEEESCCEEEECTTSCEECCSCEEEECEEECCCCCSSSBCSSCCSEEETTCEEECBCCTTCEESS
T ss_pred ceecccEEEEEeCCCCEECCCCceEECCCCeEcCCCCeeccCcCCCCCCCCCcEecCCCCcccCCCEEEEEeCCCCEECC
Confidence 68899999999999999999999999999999999999999999999988888774444556789999999999999999
Q ss_pred CceeeeccCCcccCCCCceeecccCceeeeecCCeecCCCCcccCCCCCCcccc----CCCCccCCCeEEEccCCceeec
Q psy11954 702 HARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLT----RPALSCLPGKRFYYHRGIFRLQ 777 (881)
Q Consensus 702 ~~~~~C~~~G~Ws~~~P~C~~~~g~~~~~C~~~g~ws~~~p~C~~C~~p~~~~~----~~~~~~~g~~v~~C~~Gy~l~G 777 (881)
+.+++|+++ +|++++|.| + .|..++.+.. .......++.+ .|..+|++-|
T Consensus 720 ~~~~~C~~~-~Ws~~~P~~--i----------------------~C~~~~~~~~~~~C~~g~~~~~s~C-~C~~p~~~c~ 773 (913)
T 3t5o_A 720 PSRYTCQGN-SWTPPISNS--L----------------------TCEKDTLTKLKGHCQLGQKQSGSEC-ICMSPEEDCS 773 (913)
T ss_dssp CSEEECBTT-BCSCCCTTS--C----------------------CEECCC-----CTTTTTEECSTTSC-EECCHHHHCC
T ss_pred CCceEECCC-EeeCCCCee--e----------------------ECcCCCCCCCCCCCCCCcccCCCce-EECChhhcCC
Confidence 999999988 999988853 3 4655443311 11222334332 3999999776
Q ss_pred cccCceeEEEEccCCe--eecCCCccc--cccC
Q psy11954 778 NTQKVSYTRTCTKRGT--WSGHIPTCK--AIDC 806 (881)
Q Consensus 778 ~~~~~~~~~~C~~~G~--Ws~~~p~C~--~v~C 806 (881)
.. .+.+|..+|. |....+.|+ +..|
T Consensus 774 ~~----~~~~C~~~~~~~~~~~~~~C~~~a~~C 802 (913)
T 3t5o_A 774 HH----SEDLCVFDTDSNDYFTSPACKFLAEKC 802 (913)
T ss_dssp SC----CSEEEEEETTTTEEEEEEHHHHHHHHT
T ss_pred CC----CCCeeccCCCCceeecccHHHHHHHHh
Confidence 62 5679988775 888889994 6678
No 44
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.88 E-value=1.9e-22 Score=196.39 Aligned_cols=134 Identities=25% Similarity=0.585 Sum_probs=117.8
Q ss_pred eecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCC------ceeeccCCcccCCcccccccccccceeccccc
Q psy11954 465 NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHP------RRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~------~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~ 538 (881)
.+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|.. .++|+++|+|+...|.|+
T Consensus 5 ~i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~-------------- 70 (155)
T 3gov_A 5 GNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCK-------------- 70 (155)
T ss_dssp CCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEE--------------
T ss_pred ceeCCCCCCCCCCEEecCCCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeee--------------
Confidence 478999999999999987778999999999999999999877 899999999999999999
Q ss_pred cccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCC
Q psy11954 539 VDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSAS 618 (881)
Q Consensus 539 ~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (881)
.+.|+.|..+.||.+.+..
T Consensus 71 ----~~~C~~p~~~~nG~~~~~~--------------------------------------------------------- 89 (155)
T 3gov_A 71 ----IVDCRAPGELEHGLITFST--------------------------------------------------------- 89 (155)
T ss_dssp ----ECBCCSCCCCTTEEEEESS---------------------------------------------------------
T ss_pred ----EccCCCCCCCcCceEEecC---------------------------------------------------------
Confidence 7899999999999865321
Q ss_pred CcccccCCCEEEEEcCCCC-eec--CCCceEecCCCceec-----CCCeeecccCCCCCCCCCc
Q psy11954 619 SVATYKIGALVKYRCERGY-KVE--GEPLSTCEDTGSWSG-----SVPECIYVDCGNPETVPNG 674 (881)
Q Consensus 619 ~~~~~~~Gs~v~~~C~~GY-~l~--G~~~~tC~~~G~Ws~-----~~P~C~~v~C~~p~~~~nG 674 (881)
....|.+|++|+|+|++|| .|. |+..++|+++|+|++ ..|+|+++ |+.|+.+.++
T Consensus 90 ~~~~~~~g~~v~y~C~~Gy~~l~~~G~~~~~C~~~G~Ws~~~~~~~~P~C~~v-C~~P~~p~~~ 152 (155)
T 3gov_A 90 RNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPV-CGLPKFSRKL 152 (155)
T ss_dssp TTCCCBTTCEEEEEECTTTEEECTTCCCEEEECTTSCEEBTTTBTSCCCEEEC-CSCCSSCCC-
T ss_pred CCCccccCCEEEEEeCCChhhhccCCCceEEECCCCeECCCcCCCCCCcCCCc-cCCCCCChhh
Confidence 1246889999999999997 788 889999999999998 79999998 9999876544
No 45
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} PDB: 4djz_A
Probab=99.87 E-value=4.1e-22 Score=194.07 Aligned_cols=133 Identities=23% Similarity=0.554 Sum_probs=115.0
Q ss_pred ccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcc------eEEecCCCcccCCCCcccccccCCCCCcCCCeE
Q psy11954 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGET------RRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIV 438 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~------~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ng~~ 438 (881)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|.. .++|+.+|+|++..|.|+++.|+.|+.+.||.+
T Consensus 6 i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~~~C~~p~~~~nG~~ 85 (155)
T 3gov_A 6 NECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHGLI 85 (155)
T ss_dssp CEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTEEE
T ss_pred eeCCCCCCCCCCEEecCCCCcccCCEEEEECCCCcEEccCccccceeEEEECCCCeEcCCCCeeeEccCCCCCCCcCceE
Confidence 89999999999999887678999999999999999999876 899999999999999999989998888888765
Q ss_pred EcCCCCCCCeEEEEcCCCceeeCceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCc-EEc--CCCceeeccCCc
Q psy11954 439 TTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNY-RLV--GHPRRSCLESKV 515 (881)
Q Consensus 439 ~~~~~~~gs~~~y~C~~Gy~l~g~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy-~L~--G~~~~tC~~~G~ 515 (881)
.... ....|.+|++|+|+|++|| .|. |+..++|+++|+
T Consensus 86 ~~~~---------------------------------------~~~~~~~g~~v~y~C~~Gy~~l~~~G~~~~~C~~~G~ 126 (155)
T 3gov_A 86 TFST---------------------------------------RNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGV 126 (155)
T ss_dssp EESS---------------------------------------TTCCCBTTCEEEEEECTTTEEECTTCCCEEEECTTSC
T ss_pred EecC---------------------------------------CCCccccCCEEEEEeCCChhhhccCCCceEEECCCCe
Confidence 4211 1234678999999999997 888 899999999999
Q ss_pred ccC-----CcccccccccccceeccccccccccccCCCCCCCCCe
Q psy11954 516 WSD-----TAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHS 555 (881)
Q Consensus 516 Ws~-----~~P~C~~~~~~~~~~~~~~~~~~~~i~C~~p~~~~ng 555 (881)
|++ ..|+|+ ++ |+.|.+|.++
T Consensus 127 Ws~~~~~~~~P~C~------------------~v-C~~P~~p~~~ 152 (155)
T 3gov_A 127 WMNKVLGRSLPTCL------------------PV-CGLPKFSRKL 152 (155)
T ss_dssp EEBTTTBTSCCCEE------------------EC-CSCCSSCCC-
T ss_pred ECCCcCCCCCCcCC------------------Cc-cCCCCCChhh
Confidence 998 799999 67 9999887654
No 46
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.87 E-value=8.2e-22 Score=192.58 Aligned_cols=134 Identities=21% Similarity=0.485 Sum_probs=115.0
Q ss_pred ecCCCCCCCCCCceee-ccCceecCcEEEEEcCCCcEEcC------CCceeeccCCcccCCcccccccccccceeccccc
Q psy11954 466 IDCGRLTAIPYGSISY-LNETTYLGSEVLYSCSRNYRLVG------HPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~-~~~~~~~gs~v~y~C~~Gy~L~G------~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~ 538 (881)
+.|+.|+.+.||.+.. ....|.+|++|+|+|++||.|.| +..++|+++|+|+...|.|+
T Consensus 3 ~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~-------------- 68 (159)
T 2qy0_A 3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCK-------------- 68 (159)
T ss_dssp CBCCCCCCCSTTEEEETCCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEE--------------
T ss_pred ccCcCCCCCCCCcEecCCCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCccc--------------
Confidence 6899999999997654 34568899999999999999997 47899999999999999999
Q ss_pred cccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCC
Q psy11954 539 VDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSAS 618 (881)
Q Consensus 539 ~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (881)
.+.|+.|..+.||.+....
T Consensus 69 ----~~~C~~p~~~~nG~~~~~~--------------------------------------------------------- 87 (159)
T 2qy0_A 69 ----IKDCGQPRNLPNGDFRYTT--------------------------------------------------------- 87 (159)
T ss_dssp ----ECBCCSCCCCTTEEEEESS---------------------------------------------------------
T ss_pred ----cccCCCCCCCCCCeeEecc---------------------------------------------------------
Confidence 7899999999999865320
Q ss_pred CcccccCCCEEEEEcCCCCeec----CC-----CceEecCCCceecC-----CCeeecccCCCCCCCCCce
Q psy11954 619 SVATYKIGALVKYRCERGYKVE----GE-----PLSTCEDTGSWSGS-----VPECIYVDCGNPETVPNGG 675 (881)
Q Consensus 619 ~~~~~~~Gs~v~~~C~~GY~l~----G~-----~~~tC~~~G~Ws~~-----~P~C~~v~C~~p~~~~nG~ 675 (881)
....|.+|++|+|+|++||.|. |+ ..++|+++|+|+++ .|.|+++ |+.|+.+.||.
T Consensus 88 ~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~~~~~~~~P~C~~~-C~~p~~p~~g~ 157 (159)
T 2qy0_A 88 TMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPV-CGKPVNPVEQR 157 (159)
T ss_dssp STTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEBTTTBTSCCCEEEC-CSCCSSCSSCC
T ss_pred CCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCCCCCCccCCceeCC-CCCCCCCcccc
Confidence 0135788999999999999876 54 78999999999998 9999998 99999999985
No 47
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.86 E-value=8.3e-22 Score=185.13 Aligned_cols=101 Identities=29% Similarity=0.586 Sum_probs=95.1
Q ss_pred ccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceec
Q psy11954 621 ATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLE 700 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~ 700 (881)
..|.+|++|+|+|++|| |.|+..++|+.+|+|++..|.|+++.|+.|+.+.||.+... ..+.+|++|+|+|++||+|.
T Consensus 24 ~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~nG~~~~~-~~~~~g~~v~~~C~~Gy~l~ 101 (128)
T 1gkn_A 24 SDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI-TDIQVGSRITYSCTTGHRLI 101 (128)
T ss_dssp SSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCEECBCCCCCCCTTEEEEES-SCCBTTCEEEEEECTTEECC
T ss_pred CCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCCCCeEcceECcCCCCCCCcEEEec-cCCccCCEEEEEeCCCCEEc
Confidence 46889999999999999 99999999999999999999999999999999999999874 45789999999999999999
Q ss_pred CCceeeeccCCc---ccCCCCceeec
Q psy11954 701 GHARRLCLENGT---WSSGLPTCKGN 723 (881)
Q Consensus 701 G~~~~~C~~~G~---Ws~~~P~C~~~ 723 (881)
|+..++|+++|+ |++.+|+|+++
T Consensus 102 G~~~~~C~~~G~~~~Ws~~~P~C~~i 127 (128)
T 1gkn_A 102 GHSSAECILSGNTAHWSTKPPICQRI 127 (128)
T ss_dssp SCSEEEEEECSSSEEESSCCCCCEEC
T ss_pred cCCceEEcCCCCcCCccCCCCEeeEC
Confidence 999999999999 99999999986
No 48
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens}
Probab=99.86 E-value=1.3e-21 Score=191.07 Aligned_cols=130 Identities=25% Similarity=0.527 Sum_probs=115.0
Q ss_pred CCCCCCCCcceeeEeec--ccccCCCeEEEECCCCceeeC------CceeEeC-CCcccCCCCcccccccCCCCCCccee
Q psy11954 278 ANCGSPDRHVNTTFVGT--VSTKLGSTISYACPEGNMLVG------SATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLVL 348 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~--~~~~~gs~v~y~C~~Gy~l~G------~~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~~ 348 (881)
+.|..|+.+.||.+... ..|.+|++|+|+|++||+|+| +.+++|+ +|.|+...|+|+.
T Consensus 3 ~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~g~~~~~~s~~~~C~~~G~Ws~~~p~C~~------------- 69 (159)
T 2qy0_A 3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKI------------- 69 (159)
T ss_dssp CBCCCCCCCSTTEEEETCCSSCBTTCEEEEEECTTEEEEETTEEESCCEEEBCTTSCBSSCCCEEEE-------------
T ss_pred ccCcCCCCCCCCcEecCCCCccccCCEEEEEcCCCcEEccCCcccceeEEECCCCCcCcCCCCcccc-------------
Confidence 57999999999976532 579999999999999999997 4799999 9999999999998
Q ss_pred eeehhhhhhhccccccccCCCCCcCCCceEEec--CCcccCCcEEEEEeCCCcEEe----Cc-----ceEEecCCCcccC
Q psy11954 349 YLFLSKLFRESYERLNVDCGKLEHIEHGTVTLE--TTRTTHGAVAIYACHENYTLI----GE-----TRRVCGDGGKWNG 417 (881)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~--~~~~~~g~~~~~~C~~Gy~l~----G~-----~~~~C~~~G~Ws~ 417 (881)
+.|+.|+.+.||.+... ...|.||++|+|+|++||.|. |+ ..++|+++|+|++
T Consensus 70 ----------------~~C~~p~~~~nG~~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~~~G~~~~g~~~~~C~~~G~Ws~ 133 (159)
T 2qy0_A 70 ----------------KDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKN 133 (159)
T ss_dssp ----------------CBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECCC---CCSSTTEEEECTTSSEEB
T ss_pred ----------------ccCCCCCCCCCCeeEeccCCCCcccCCEEEEECCCcceecccccCccccCCccEEECCCccCCC
Confidence 89999999999998875 356899999999999999876 54 7899999999999
Q ss_pred C-----CCcccccccCCCCCcCCCe
Q psy11954 418 T-----EPQCLFDWCAEPPQISGGI 437 (881)
Q Consensus 418 ~-----~P~C~~~~C~~p~~~~ng~ 437 (881)
. .|.|+++ |+.|+.+.||.
T Consensus 134 ~~~~~~~P~C~~~-C~~p~~p~~g~ 157 (159)
T 2qy0_A 134 EQKGEKIPRCLPV-CGKPVNPVEQR 157 (159)
T ss_dssp TTTBTSCCCEEEC-CSCCSSCSSCC
T ss_pred CCCCccCCceeCC-CCCCCCCcccc
Confidence 8 9999998 99999998874
No 49
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.86 E-value=1.3e-21 Score=184.51 Aligned_cols=102 Identities=28% Similarity=0.706 Sum_probs=92.2
Q ss_pred ccccCCCEEEEEcCCCCeecCCCceEecC----CCceecCCCeeec----ccCCCCCCCCCceEEecCCCeecCcEEEEE
Q psy11954 621 ATYKIGALVKYRCERGYKVEGEPLSTCED----TGSWSGSVPECIY----VDCGNPETVPNGGFTLTSNATYYGTAVLYE 692 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~----~G~Ws~~~P~C~~----v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~ 692 (881)
..|.+|++|+|+|++||+|.|+..++|+. +|+|+++.|+|++ +.|+.| .+.||.+......+.+|++|+|+
T Consensus 20 ~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p-~~~~g~~~~~~~~~~~g~~v~~~ 98 (130)
T 1ly2_A 20 TPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEP-IVPGGYKIRGSTPYRHGDSVTFA 98 (130)
T ss_dssp SSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEECCTTCEECCC-CCTTEEEEECCSSEETTCEEEEE
T ss_pred CcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeEcccCccCCcCC-CCCCCeEecCcccccCCCEEEEE
Confidence 46889999999999999999999999986 7999999999997 899988 56788776545578899999999
Q ss_pred cCCCceecCCceeeeccCCcccCC-CCceeec
Q psy11954 693 CDENYRLEGHARRLCLENGTWSSG-LPTCKGN 723 (881)
Q Consensus 693 C~~Gy~L~G~~~~~C~~~G~Ws~~-~P~C~~~ 723 (881)
|++||.|.|+..++|+++|+|++. +|+|+++
T Consensus 99 C~~Gy~l~G~~~~~C~~~G~Ws~~~~P~C~~i 130 (130)
T 1ly2_A 99 CKTNFSMNGNKSVWCQANNMWGPTRLPTCVSI 130 (130)
T ss_dssp ECTTEEEESCSEEEECTTSSEESSCCCEEEEC
T ss_pred eCCCCEEeCCCceEECCCCEECCCCCccceEC
Confidence 999999999999999999999997 9999875
No 50
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1
Probab=99.86 E-value=8.8e-22 Score=184.98 Aligned_cols=120 Identities=22% Similarity=0.550 Sum_probs=108.6
Q ss_pred eecCCCCCCCCCCceeecc--CceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceeccccccccc
Q psy11954 465 NIDCGRLTAIPYGSISYLN--ETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRR 542 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~~~--~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~ 542 (881)
.+.|+.|+.+.||.+.... ..|.+|++|+|+|++|| |.|...++|+.+|+|+...|.|+
T Consensus 3 ~~~C~~p~~~~ng~~~~~~~~~~~~~g~~~~y~C~~Gy-l~G~~~~~C~~~g~Ws~~~p~C~------------------ 63 (128)
T 1gkn_A 3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEY-YGRPFSITCLDNLVWSSPKDVCK------------------ 63 (128)
T ss_dssp CCEECCCCCCSSEEECSCCCCSSEESSCEEEEEECTTE-ESCCEEEEBCSSSCBCCCCSCCE------------------
T ss_pred CccCcCCCCCCCCEEeccCcCCCcCCCCEEEEEcCCCC-cCCCCceEECCCCcCCCCCCeEc------------------
Confidence 3679999999999998764 56899999999999999 99999999999999999999999
Q ss_pred cccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCccc
Q psy11954 543 EIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVAT 622 (881)
Q Consensus 543 ~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (881)
++.|+.|..+.||.+... ..
T Consensus 64 ~~~C~~p~~~~nG~~~~~------------------------------------------------------------~~ 83 (128)
T 1gkn_A 64 RKSCKTPPDPVNGMVHVI------------------------------------------------------------TD 83 (128)
T ss_dssp ECBCCCCCCCTTEEEEES------------------------------------------------------------SC
T ss_pred ceECcCCCCCCCcEEEec------------------------------------------------------------cC
Confidence 789999999999986421 25
Q ss_pred ccCCCEEEEEcCCCCeecCCCceEecCCCc---eecCCCeeecc
Q psy11954 623 YKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYV 663 (881)
Q Consensus 623 ~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~---Ws~~~P~C~~v 663 (881)
|.+|++|+|+|++||+|.|+..++|+.+|+ |++..|.|++|
T Consensus 84 ~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~i 127 (128)
T 1gkn_A 84 IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRI 127 (128)
T ss_dssp CBTTCEEEEEECTTEECCSCSEEEEEECSSSEEESSCCCCCEEC
T ss_pred CccCCEEEEEeCCCCEEccCCceEEcCCCCcCCccCCCCEeeEC
Confidence 778999999999999999999999999999 99999999876
No 51
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of comple activation, short consensus repeat, viral receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Probab=99.85 E-value=1.1e-21 Score=185.09 Aligned_cols=125 Identities=29% Similarity=0.687 Sum_probs=104.7
Q ss_pred eecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeecc----CCcccCCcccccccccccceeccccccc
Q psy11954 465 NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLE----SKVWSDTAPKCEGKATKDIKVCSNVAVD 540 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~----~G~Ws~~~P~C~~~~~~~~~~~~~~~~~ 540 (881)
.|.|++|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. +|+|+.+.|.|+...
T Consensus 1 ~i~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~------------- 67 (130)
T 1ly2_A 1 EASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFN------------- 67 (130)
T ss_dssp CCEECCCCCCTTEEECCCCSSEETTCEEEEEECTTEEEESCSEEEEECSSSSSCEESSCCCEEEECC-------------
T ss_pred CccCCCCCCCCCCeEecCCCcccCCCEEEEEcCCCCEEeCCCeeEEeCCCCCCCeECCCCCeeEccc-------------
Confidence 378999999999999876677899999999999999999999999996 799999999998100
Q ss_pred cccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCc
Q psy11954 541 RREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSV 620 (881)
Q Consensus 541 ~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (881)
..+.|+.|.++ ++.+... .
T Consensus 68 -~~~~C~~p~~~-~g~~~~~-----------------------------------------------------------~ 86 (130)
T 1ly2_A 68 -KYSSCPEPIVP-GGYKIRG-----------------------------------------------------------S 86 (130)
T ss_dssp -TTCEECCCCCT-TEEEEEC-----------------------------------------------------------C
T ss_pred -CccCCcCCCCC-CCeEecC-----------------------------------------------------------c
Confidence 01789998544 4443210 1
Q ss_pred ccccCCCEEEEEcCCCCeecCCCceEecCCCceecC-CCeeecc
Q psy11954 621 ATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGS-VPECIYV 663 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~-~P~C~~v 663 (881)
..|.+|++|+|+|++||.|.|+..++|+++|+|++. .|+|++|
T Consensus 87 ~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~~P~C~~i 130 (130)
T 1ly2_A 87 TPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSI 130 (130)
T ss_dssp SSEETTCEEEEEECTTEEEESCSEEEECTTSSEESSCCCEEEEC
T ss_pred ccccCCCEEEEEeCCCCEEeCCCceEECCCCEECCCCCccceEC
Confidence 257899999999999999999999999999999997 9999864
No 52
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.85 E-value=1.3e-21 Score=185.92 Aligned_cols=100 Identities=33% Similarity=0.767 Sum_probs=93.0
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCCc---eecCCCeeecccCCCCCCCCCceEEecC-CCeecCcEEEEEcCCC-
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTLTS-NATYYGTAVLYECDEN- 696 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~---Ws~~~P~C~~v~C~~p~~~~nG~~~~~~-~~~~~g~~v~y~C~~G- 696 (881)
.|.+|++|+|+|++||+|.|+..++|+.+|+ |++..|.|+++.|+.|+.+.||.+.... ..+.+|++|+|+|++|
T Consensus 23 ~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy 102 (136)
T 1gkg_A 23 DIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGS 102 (136)
T ss_dssp CSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSCCCCEEECCCCCCCCCTTCCBCSSCSSCCCSSCEEEBCCCCTT
T ss_pred CCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCCCCCEEeecCCCCCCCCCCeEEcCCCCccccCCEEEEEeCCCC
Confidence 5789999999999999999999999999999 9999999999999999999999987543 4577999999999999
Q ss_pred -----ceecCCceeeeccC----CcccCCCCcee
Q psy11954 697 -----YRLEGHARRLCLEN----GTWSSGLPTCK 721 (881)
Q Consensus 697 -----y~L~G~~~~~C~~~----G~Ws~~~P~C~ 721 (881)
|.|.|+..++|+++ |+|++++|+|+
T Consensus 103 ~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~P~C~ 136 (136)
T 1gkg_A 103 RGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI 136 (136)
T ss_dssp SCCSSCCEESCCEEECCCSSSSSCCCSCCCCEEC
T ss_pred CccceEEEeCCCeeEECCCCCCCCEECCCCcccC
Confidence 99999999999998 99999999995
No 53
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.85 E-value=1.2e-21 Score=183.37 Aligned_cols=101 Identities=31% Similarity=0.695 Sum_probs=93.1
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCce
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYR 698 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~ 698 (881)
.|.+|++|+|+|++||+|.|+..++|+.+| +|++..|+|+++.|+.|+.+.||.+......|.+|++|+|+|++||+
T Consensus 19 ~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~ 98 (125)
T 1h03_P 19 GILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFT 98 (125)
T ss_dssp CSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEECBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCE
T ss_pred CcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcCCCCcCCCCCCCCCCEEeCCcCceecCCEEEEEECCCCE
Confidence 467899999999999999999999999888 89999999999999999999999987655567899999999999999
Q ss_pred ecCCceeeecc---CCcccCCCCceee
Q psy11954 699 LEGHARRLCLE---NGTWSSGLPTCKG 722 (881)
Q Consensus 699 L~G~~~~~C~~---~G~Ws~~~P~C~~ 722 (881)
|.|+..++|+. +|+|++++|+|++
T Consensus 99 l~G~~~~~C~~~~~~G~Ws~~~P~C~~ 125 (125)
T 1h03_P 99 MIGEHSIYCTVNNDEGEWSGPPPECRG 125 (125)
T ss_dssp EESCSEEEEEEETTEEEESSCCCEEEC
T ss_pred ECCCCeeEEecCCCCCEECCCCceecC
Confidence 99999999995 6999999999974
No 54
>1h03_P Complement decay-accelerating factor; immune system protein, enteroviral receptor, bacterial receptor, ligand for CD97, complement pathway; 1.7A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P 1h04_P 2qzd_A
Probab=99.85 E-value=2e-21 Score=181.88 Aligned_cols=118 Identities=29% Similarity=0.605 Sum_probs=108.3
Q ss_pred CCCCCCCCcceeeEeecccccCCCeEEEECCCCceeeCCceeEeC-CC---cccCCCCcccccccCCCCCCcceeeeehh
Q psy11954 278 ANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCK-EG---FWTGVAPTCQYFQLQPMDVPNLVLYLFLS 353 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G---~Ws~~~P~C~~~~~~p~~~~~~~~~~~~~ 353 (881)
+.|+.|+.+.||.+.....|.+|++|+|+|++||+|.|..+++|+ +| .|+...|+|+.
T Consensus 1 k~C~~p~~~~nG~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~~g~~~~Ws~~~p~C~~------------------ 62 (125)
T 1h03_P 1 KSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE------------------ 62 (125)
T ss_dssp CBCCCCCCCTTEEEECTTCSBTTCEEEEEECTTEEEESCSEEEEEEETTEEEESSCCCEEEE------------------
T ss_pred CcCcCCCCCCCCEEECCCCcCcCCEEEEECCCCCeECCCCeeEEcCCCCCCEeCCCCCcCCC------------------
Confidence 369999999999998766789999999999999999999999999 78 89999999998
Q ss_pred hhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcceEEecC---CCcccCCCCcccc
Q psy11954 354 KLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGD---GGKWNGTEPQCLF 424 (881)
Q Consensus 354 ~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~~~~C~~---~G~Ws~~~P~C~~ 424 (881)
+.|+.|+.+.||.+......|.+|++|+|+|++||.|.|+..++|+. +|+|++..|.|++
T Consensus 63 -----------~~C~~p~~~~nG~~~~~~~~~~~g~~v~~~C~~Gy~l~G~~~~~C~~~~~~G~Ws~~~P~C~~ 125 (125)
T 1h03_P 63 -----------IYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 125 (125)
T ss_dssp -----------CBCCCCCCCTTEEETTCCSCCBTTCEEEEEECTTCEEESCSEEEEEEETTEEEESSCCCEEEC
T ss_pred -----------CcCCCCCCCCCCEEeCCcCceecCCEEEEEECCCCEECCCCeeEEecCCCCCEECCCCceecC
Confidence 89999999999998765557899999999999999999999999995 6999999999974
No 55
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Probab=99.84 E-value=4.2e-21 Score=182.42 Aligned_cols=120 Identities=30% Similarity=0.701 Sum_probs=110.0
Q ss_pred cCCCCCCCCCCcceeeEeecccccCCCeEEEECCCCceeeCCceeEeC-CCc---ccCCCCcccccccCCCCCCcceeee
Q psy11954 275 HNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCK-EGF---WTGVAPTCQYFQLQPMDVPNLVLYL 350 (881)
Q Consensus 275 ~~~~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~l~G~~~~~C~-~G~---Ws~~~P~C~~~~~~p~~~~~~~~~~ 350 (881)
+.++.|+.|+.+.||.+.....|.+|++|+|+|++||+|+|+.+++|+ +|. |++..|.|++
T Consensus 2 c~~~~C~~p~~~~nG~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~~~G~~~~Ws~~~P~C~~--------------- 66 (136)
T 1gkg_A 2 AEAKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQR--------------- 66 (136)
T ss_dssp CSCCBCCCCCCCSSCEEECCSCSBTTCEEEEECCSSEEECSCSEEEEEECSSSEEESSCCCCEEE---------------
T ss_pred cccCCCcCCCCCCCCEEECCCCCccCCEEEEECCCCCeEcCCCceEEeCCCccccccCCCCCEEe---------------
Confidence 346789999999999987656899999999999999999999999999 899 9999999998
Q ss_pred ehhhhhhhccccccccCCCCCcCCCceEEecC-CcccCCcEEEEEeCCC------cEEeCcceEEecCC----CcccCCC
Q psy11954 351 FLSKLFRESYERLNVDCGKLEHIEHGTVTLET-TRTTHGAVAIYACHEN------YTLIGETRRVCGDG----GKWNGTE 419 (881)
Q Consensus 351 ~~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~-~~~~~g~~~~~~C~~G------y~l~G~~~~~C~~~----G~Ws~~~ 419 (881)
+.|+.|+.+.||.+.... ..|.+|++|+|+|++| |.|.|+..++|+.+ |+|+++.
T Consensus 67 --------------~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~~~~~y~l~G~~~~~C~~~~~~~G~Ws~~~ 132 (136)
T 1gkg_A 67 --------------IPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPA 132 (136)
T ss_dssp --------------CCCCCCCCCTTCCBCSSCSSCCCSSCEEEBCCCCTTSCCSSCCEESCCEEECCCSSSSSCCCSCCC
T ss_pred --------------ecCCCCCCCCCCeEEcCCCCccccCCEEEEEeCCCCCccceEEEeCCCeeEECCCCCCCCEECCCC
Confidence 899999999999987643 4688999999999999 99999999999999 9999999
Q ss_pred Cccc
Q psy11954 420 PQCL 423 (881)
Q Consensus 420 P~C~ 423 (881)
|+|+
T Consensus 133 P~C~ 136 (136)
T 1gkg_A 133 PQCI 136 (136)
T ss_dssp CEEC
T ss_pred cccC
Confidence 9995
No 56
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.83 E-value=1.6e-20 Score=210.51 Aligned_cols=168 Identities=24% Similarity=0.544 Sum_probs=132.3
Q ss_pred ecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceeec----cCCcccCCcccccccccccceecccccccc
Q psy11954 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCL----ESKVWSDTAPKCEGKATKDIKVCSNVAVDR 541 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~----~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~ 541 (881)
|.|++|+.+.||.+......|.+|++|+|+|++||.|.|...++|+ .+|+|+++.|.|+
T Consensus 2 i~C~~p~~~~nG~~~~~~~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~----------------- 64 (376)
T 2aty_A 2 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCE----------------- 64 (376)
T ss_pred CCCcCCCCCCCCEEeccCCcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCccc-----------------
Confidence 6899999999999998767789999999999999999999999999 7999999999999
Q ss_pred cc----ccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCC
Q psy11954 542 RE----IRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSA 617 (881)
Q Consensus 542 ~~----i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (881)
. +.|+.|..+.++.+..
T Consensus 65 -~~~~~~~C~~p~~~~~~~~~~---------------------------------------------------------- 85 (376)
T 2aty_A 65 -YFNKYSSCPEPIVPGGYKIRG---------------------------------------------------------- 85 (376)
T ss_pred -cccCccEeCCCcCCCCeEecC----------------------------------------------------------
Confidence 4 6899998877665421
Q ss_pred CCcccccCCCEEEEEcCCCCeecCCCceEecCCCceec-CCCeeecccCCCCCCCCCceE--EecCCCee----------
Q psy11954 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSG-SVPECIYVDCGNPETVPNGGF--TLTSNATY---------- 684 (881)
Q Consensus 618 ~~~~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~-~~P~C~~v~C~~p~~~~nG~~--~~~~~~~~---------- 684 (881)
...|.+|++|+|+|++||.|.|+..++|+++|+|++ ..|+|+++ |+.|+.+.|+.- ........
T Consensus 86 --~~~~~~g~~~~~~C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~-~~~~~~~~~~~~~~~~~~~v~~~~~c~~~~~~ 162 (376)
T 2aty_A 86 --STPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSV-FPLEGSIEGRGGSELADPEVPRDCGCKPCICT 162 (376)
T ss_pred --CCCccCCCEEEEECCCCCEECCCcCeEECCCCEECCCCCCEeEcc-CCCcccccCCCcceeeccccccCcCCCCCCCC
Confidence 135789999999999999999999999999999998 79999997 556666777421 11111000
Q ss_pred ---cCcEEEEEcC--CCceecCCceeeeccCCc
Q psy11954 685 ---YGTAVLYECD--ENYRLEGHARRLCLENGT 712 (881)
Q Consensus 685 ---~g~~v~y~C~--~Gy~L~G~~~~~C~~~G~ 712 (881)
..+...+.+. .++.+-+..+++|...|.
T Consensus 163 ~~~~p~v~~~~p~~~~~~~~g~~v~L~C~~~g~ 195 (376)
T 2aty_A 163 VPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDI 195 (376)
T ss_pred cccCcEEEEeCcCHHHceeeCCeeEEEEEEecc
Confidence 1223345554 346666778899987664
No 57
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.83 E-value=2.2e-21 Score=183.19 Aligned_cols=101 Identities=29% Similarity=0.670 Sum_probs=94.1
Q ss_pred ccccCCCEEEEEcCCCC-eecCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCcee
Q psy11954 621 ATYKIGALVKYRCERGY-KVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRL 699 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY-~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L 699 (881)
..|.+|++|+|+|++|| .|.|+..++|+.+|+|++ .|.|+++.|+.|+.+.||.+.. ...+.+|++|+|+|++||+|
T Consensus 22 ~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~~~~C~~p~~~~nG~~~~-~~~~~~g~~v~~~C~~Gy~L 99 (133)
T 2a55_A 22 TRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCIYKRCRHPGELRNGQVEI-KTDLSFGSQIEFSCSEGFFL 99 (133)
T ss_dssp SCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC-CCCSEECBCCCCCCCTTBCCCC-CSTTBSSCBCCCCBCTTCBC
T ss_pred CccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC-CCcCccCCCcCCCccCCceEEc-CCCCcCCCEEEEEcCCCCEE
Confidence 47889999999999999 788999999999999999 9999999999999999999875 34577999999999999999
Q ss_pred cCCceeeeccCC---cccCCCCceeec
Q psy11954 700 EGHARRLCLENG---TWSSGLPTCKGN 723 (881)
Q Consensus 700 ~G~~~~~C~~~G---~Ws~~~P~C~~~ 723 (881)
.|+..++|+++| +|++++|.|+..
T Consensus 100 ~G~~~~~C~~~G~~~~Ws~~~p~C~~~ 126 (133)
T 2a55_A 100 IGSTTSRCEVQDRGVGWSHPLPQCEIL 126 (133)
T ss_dssp CSCSCCBCCCCSSSCCCSCCCCCCBCC
T ss_pred cCCCeeEecCCCCCCEeCCCCcccccc
Confidence 999999999999 999999999876
No 58
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.82 E-value=7.3e-20 Score=205.23 Aligned_cols=102 Identities=25% Similarity=0.631 Sum_probs=92.6
Q ss_pred ccccCCCEEEEEcCCCCeecCCCceEec----CCCceecCCCeeec----ccCCCCCCCCCceEEecCCCeecCcEEEEE
Q psy11954 621 ATYKIGALVKYRCERGYKVEGEPLSTCE----DTGSWSGSVPECIY----VDCGNPETVPNGGFTLTSNATYYGTAVLYE 692 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~~~~tC~----~~G~Ws~~~P~C~~----v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~ 692 (881)
..|.+|++|+|+|++||.|.|+..++|+ .+|+|+++.|.|++ +.|+.|..+.++.+.. ...|.+|++|+|+
T Consensus 20 ~~~~~g~~~~y~C~~Gy~l~G~~~~~C~~~~~~~g~Ws~~~P~C~~~~~~~~C~~p~~~~~~~~~~-~~~~~~g~~~~~~ 98 (376)
T 2aty_A 20 TPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPIVPGGYKIRG-STPYRHGDSVTFA 98 (376)
T ss_pred CcccCCCEEEEEeCCCCEEcCCCceEEeccCCCCCeECCCCCccccccCccEeCCCcCCCCeEecC-CCCccCCCEEEEE
Confidence 3688999999999999999999999999 79999999999998 7899998776666654 4567899999999
Q ss_pred cCCCceecCCceeeeccCCcccC-CCCceeec
Q psy11954 693 CDENYRLEGHARRLCLENGTWSS-GLPTCKGN 723 (881)
Q Consensus 693 C~~Gy~L~G~~~~~C~~~G~Ws~-~~P~C~~~ 723 (881)
|++||.|.|+..++|+++|+|++ ..|+|+.+
T Consensus 99 C~~gy~l~G~~~~~C~~~g~Ws~~~~p~C~~~ 130 (376)
T 2aty_A 99 CKTNFSMNGNKSVWCQANNMWGPTRLPTCVSV 130 (376)
T ss_pred CCCCCEECCCcCeEECCCCEECCCCCCEeEcc
Confidence 99999999999999999999998 79999987
No 59
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system; NMR {Homo sapiens}
Probab=99.82 E-value=3.6e-21 Score=181.73 Aligned_cols=119 Identities=20% Similarity=0.518 Sum_probs=105.6
Q ss_pred ecCCCCCCCCCCceeec---cCceecCcEEEEEcCCCc-EEcCCCceeeccCCcccCCcccccccccccceecccccccc
Q psy11954 466 IDCGRLTAIPYGSISYL---NETTYLGSEVLYSCSRNY-RLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDR 541 (881)
Q Consensus 466 i~C~~p~~~~nG~~~~~---~~~~~~gs~v~y~C~~Gy-~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~ 541 (881)
|.|++|+.++||.+... ...|.+|++|+|+|++|| .|.|+..++|+.+|+|+. .|.|+
T Consensus 1 v~C~~Pp~~~ng~~~~~~~~~~~y~~g~~v~y~C~~Gy~~l~G~~~~~C~~~G~Ws~-~p~C~----------------- 62 (133)
T 2a55_A 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTFCI----------------- 62 (133)
T ss_dssp CCCCSCCCCTTCBCCSSCTTCSCCCTTCCCCCBCCTTEESCCSCCCCEECSSSSEEC-CCCSE-----------------
T ss_pred CcCCCCCCCCcceEccccccCCccCCCCEEEEEeCCCCcccCCCCEEEECCCCeECC-CCcCc-----------------
Confidence 57999999999998763 346889999999999999 789999999999999999 99999
Q ss_pred ccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCcc
Q psy11954 542 REIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVA 621 (881)
Q Consensus 542 ~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (881)
++.|+.|..+.||.+.+ ..
T Consensus 63 -~~~C~~p~~~~nG~~~~------------------------------------------------------------~~ 81 (133)
T 2a55_A 63 -YKRCRHPGELRNGQVEI------------------------------------------------------------KT 81 (133)
T ss_dssp -ECBCCCCCCCTTBCCCC------------------------------------------------------------CS
T ss_pred -cCCCcCCCccCCceEEc------------------------------------------------------------CC
Confidence 78999999999886421 13
Q ss_pred cccCCCEEEEEcCCCCeecCCCceEecCCC---ceecCCCeeecc
Q psy11954 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTG---SWSGSVPECIYV 663 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G---~Ws~~~P~C~~v 663 (881)
.|.+|++|+|+|++||+|.|+..++|+.+| +|++++|.|+..
T Consensus 82 ~~~~g~~v~~~C~~Gy~L~G~~~~~C~~~G~~~~Ws~~~p~C~~~ 126 (133)
T 2a55_A 82 DLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEIL 126 (133)
T ss_dssp TTBSSCBCCCCBCTTCBCCSCSCCBCCCCSSSCCCSCCCCCCBCC
T ss_pred CCcCCCEEEEEcCCCCEEcCCCeeEecCCCCCCEeCCCCcccccc
Confidence 578899999999999999999999999999 999999998753
No 60
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=99.79 E-value=2.4e-19 Score=172.57 Aligned_cols=128 Identities=16% Similarity=0.170 Sum_probs=97.4
Q ss_pred CcccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEE-EccCCCCCCCCc
Q psy11954 16 FISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRI-TTRGCCGHQPLQ 94 (881)
Q Consensus 16 ~~~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i-~nr~d~~~~~~~ 94 (881)
.....||||+|+|+||++...+.|.+|+||+.++.|... .+..|||+|||++++.|..|+| ++|.+ +.
T Consensus 20 ~~~~~NlAl~~~a~~s~~~~~g~a~~aiDGn~~T~W~s~------~~~~p~~~VDLg~~~~V~~v~i~~~r~~-----v~ 88 (149)
T 4a42_A 20 HMASENLAMKDETKVEVTSNNSEANNLRDGNENTLWVPG------QEEEKSVTFDLSKEKDISAIDIVSKGNS-----PL 88 (149)
T ss_dssp ---CEEGGGSTTCEEEESSCGGGGGGGGSSCTTSCBCCC------SCSSEEEEEEEEEEEECCEEEEEECSSS-----CC
T ss_pred CCCccccccCCCceEEEEcCCCChHhcEeCCCCCEEEcC------CCCCCeEEEECCCcEEEEEEEEEcCCCC-----cE
Confidence 335689999999999988777889999999999999643 2378999999999999999999 88754 78
Q ss_pred ccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEe
Q psy11954 95 DLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLV 174 (881)
Q Consensus 95 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~ 174 (881)
.|+|.++++... |+.+ ..... .........+.+..++.||||||.++
T Consensus 89 ~y~I~~S~DG~~--------------W~~~------------------~~~g~-~~~~~~~~~~~f~~pv~aRYVRi~~~ 135 (149)
T 4a42_A 89 KYSIEISNDGTE--------------WTKI------------------VDENN-NEENKAVYSNILKSGKIGRFVRFNFN 135 (149)
T ss_dssp CEEEEEESSSSS--------------CEEE------------------EEETT-CCCCCSEEEEECCTTCEEEEEEEEEC
T ss_pred EEEEEEEcCCCe--------------EeEe------------------EEcce-eCCCCceEEEEcCCCceEEEEEEEEe
Confidence 999999877331 1111 01100 11123456677766899999999999
Q ss_pred cCccceEeeEEEeec
Q psy11954 175 GVEGSLSLCEVEIFT 189 (881)
Q Consensus 175 g~~~~l~l~EveV~g 189 (881)
+. .++|+||+||.
T Consensus 136 ~~--~~si~E~~Vy~ 148 (149)
T 4a42_A 136 SE--NVKIGEIKIYK 148 (149)
T ss_dssp SS--SCCEEEEEEEE
T ss_pred cC--CcEEEEEEEEC
Confidence 86 89999999995
No 61
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=99.78 E-value=1.8e-19 Score=174.88 Aligned_cols=130 Identities=14% Similarity=0.161 Sum_probs=94.8
Q ss_pred ccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccE
Q psy11954 18 SGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLE 97 (881)
Q Consensus 18 ~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~ 97 (881)
...|||+||+|+|||...++.|.+||||+.+++|.+.. .+.++||+||||+++.|++|+|.++.+ .+...|+
T Consensus 25 ~~~NLA~~k~ataSs~~~~~~a~~AvDGn~~T~W~s~~-----~~~~~Wi~VDLg~~~~v~~v~i~~~~~---~~~~~y~ 96 (161)
T 4a3z_A 25 NYVNIAENKNVSGSNSQSGNPLSNITDGDLSSLWISDN-----GAMPANATIDLEGNNFVDFLELHFEKE---GFRFQFK 96 (161)
T ss_dssp -CCBTTTTCCEEESCBCTTCCGGGGSSSCTTCCEEBGG-----GCSSEEEEEEEEEEEEEEEEEEECSST---TCCEEEE
T ss_pred CcccccCCCceEEeCCcCCCChhhcCcCCCCCeEEcCC-----CCCCeEEEEECCCcEEEeEEEEEECCC---CceEEEE
Confidence 46899999999999998878899999999999997542 347899999999999999999998763 3556788
Q ss_pred EEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc
Q psy11954 98 IRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE 177 (881)
Q Consensus 98 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~ 177 (881)
|.++++.. .|+ ....... ...+...++.++.++.||||||++.+..
T Consensus 97 IevS~Dg~--------------~W~-------------------~v~~~t~-~~~~~~~~~~~~~~~~aRYVRv~~~~~~ 142 (161)
T 4a3z_A 97 VEVEDESG--------------NRE-------------------TVLDMTS-NTEDNKKSYNIPVKKEISKIHATITGKA 142 (161)
T ss_dssp EEEECTTC--------------CEE-------------------EEEECTT-CCSCCCSEEEEEEEEEEEEEEEEEEEEC
T ss_pred EEEEcCCC--------------CEE-------------------EEEEecC-CCCCccEEEEcCCCcEEEEEEEEEEecC
Confidence 88876522 111 1111111 1111223334433688999999999754
Q ss_pred c-------ceEeeEEEeec
Q psy11954 178 G-------SLSLCEVEIFT 189 (881)
Q Consensus 178 ~-------~l~l~EveV~g 189 (881)
. +.+|+|||||.
T Consensus 143 ~~g~~~~~~~si~E~~V~s 161 (161)
T 4a3z_A 143 PGGSFDQAWAAIAEIKAMS 161 (161)
T ss_dssp SCSTTTTCCCEESEEEEEC
T ss_pred CCccccCCCCEEEEEEEeC
Confidence 2 47999999984
No 62
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.75 E-value=1.2e-18 Score=163.82 Aligned_cols=96 Identities=29% Similarity=0.679 Sum_probs=83.8
Q ss_pred ccccCCCEEEEEcCCCCeecCCCceEecCCCceecCCCeeecccCCCCCCCCCc-eEEe----cCCCe-ecCcEEEEEcC
Q psy11954 621 ATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNG-GFTL----TSNAT-YYGTAVLYECD 694 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG-~~~~----~~~~~-~~g~~v~y~C~ 694 (881)
..|.+|++|+|+|++||.|.|+..++|+ +|+|+ ..|.|++ .|+.|+.+.|| .+.. ....| .+|++|+|+|+
T Consensus 24 ~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C~~-~C~~p~~~~~g~~i~~~~~~~~~~y~~~g~~v~f~C~ 100 (129)
T 3r62_A 24 SVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-EPPKCLH-PCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCK 100 (129)
T ss_dssp SSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-CCCEEEC-CEECCHHHHHHHTEEETTTTTCCSEECTTCEEEEEEC
T ss_pred CcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-CCCCccC-cCCCChhhhcccceeeeecccccccccCCCEEEEEeC
Confidence 4688999999999999999999999999 99999 7999998 99999878887 3432 12344 47999999999
Q ss_pred CCceecCCc---eeeeccCCcccCCCCceee
Q psy11954 695 ENYRLEGHA---RRLCLENGTWSSGLPTCKG 722 (881)
Q Consensus 695 ~Gy~L~G~~---~~~C~~~G~Ws~~~P~C~~ 722 (881)
+||.|.|+. .++|+ +|+| ..|+|+.
T Consensus 101 ~Gy~l~G~~~~~~~~C~-~G~W--~~P~C~~ 128 (129)
T 3r62_A 101 RGYRLSSRSHTLRTTCW-DGKL--EYPTCAK 128 (129)
T ss_dssp TTEEECTTSCCSEEECB-TTBC--CCCCEEE
T ss_pred CCccccCCCCcceEEeC-CCcC--CCceeee
Confidence 999999998 99999 8999 5899975
No 63
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain, regulator of C activation, C3D, immune system; 1.52A {Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A 3kzj_A 2xqw_C
Probab=99.75 E-value=8e-19 Score=165.07 Aligned_cols=119 Identities=27% Similarity=0.528 Sum_probs=97.1
Q ss_pred eecCCCCCCCCCCceeec-cCceecCcEEEEEcCCCcEEcCCCceeeccCCcccCCcccccccccccceecccccccccc
Q psy11954 465 NIDCGRLTAIPYGSISYL-NETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRRE 543 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~~-~~~~~~gs~v~y~C~~Gy~L~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~~~~~~ 543 (881)
.+.|++|+.+.||.+... ...|.+|++|+|+|++||.|.|...++|+ +|+|+ .+|.|+ +
T Consensus 4 ~~~C~~p~~~~nG~~~~~~~~~~~~g~~v~y~C~~Gy~l~G~~~~~C~-~g~Ws-~~p~C~------------------~ 63 (129)
T 3r62_A 4 FGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCR-NGQWS-EPPKCL------------------H 63 (129)
T ss_dssp -CCBCSCCCBTTEEESSCCCSSBCTTCEEEEEECTTCEEESCSEEEEE-TTEEC-CCCEEE------------------C
T ss_pred cccCcCCCCCCCCEEecCCCCcCCCCCEEEEECCCCCEeCCCCeeEcC-CCcCC-CCCCcc------------------C
Confidence 478999999999999763 35688999999999999999999999999 99999 799999 5
Q ss_pred ccCCCCCCCCCe-eEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCCCccc
Q psy11954 544 IRCPEPTLPAHS-ILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVAT 622 (881)
Q Consensus 544 i~C~~p~~~~ng-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (881)
.|+.|..+.|| .+.+.. ......
T Consensus 64 -~C~~p~~~~~g~~i~~~~-------------------------------------------------------~~~~~~ 87 (129)
T 3r62_A 64 -PCVISREIMENYNIALRW-------------------------------------------------------RAKQKL 87 (129)
T ss_dssp -CEECCHHHHHHHTEEETT-------------------------------------------------------TTTCCS
T ss_pred -cCCCChhhhcccceeeee-------------------------------------------------------cccccc
Confidence 89888766555 221100 011234
Q ss_pred c-cCCCEEEEEcCCCCeecCCC---ceEecCCCceecCCCeeec
Q psy11954 623 Y-KIGALVKYRCERGYKVEGEP---LSTCEDTGSWSGSVPECIY 662 (881)
Q Consensus 623 ~-~~Gs~v~~~C~~GY~l~G~~---~~tC~~~G~Ws~~~P~C~~ 662 (881)
| .+|++|+|+|++||.|.|++ .++|+ +|+| ..|+|++
T Consensus 88 y~~~g~~v~f~C~~Gy~l~G~~~~~~~~C~-~G~W--~~P~C~~ 128 (129)
T 3r62_A 88 YSRTGESVEFVCKRGYRLSSRSHTLRTTCW-DGKL--EYPTCAK 128 (129)
T ss_dssp EECTTCEEEEEECTTEEECTTSCCSEEECB-TTBC--CCCCEEE
T ss_pred cccCCCEEEEEeCCCccccCCCCcceEEeC-CCcC--CCceeee
Confidence 5 68999999999999999998 99999 8999 5899985
No 64
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.73 E-value=1.4e-18 Score=162.00 Aligned_cols=92 Identities=27% Similarity=0.617 Sum_probs=81.6
Q ss_pred cCCCEEEEEcCCCCeecCC---CceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceec
Q psy11954 624 KIGALVKYRCERGYKVEGE---PLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLE 700 (881)
Q Consensus 624 ~~Gs~v~~~C~~GY~l~G~---~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~ 700 (881)
.+|++|+|+|++||.|.|. ..++|+.+| |++. |.|+ +.|+. +.+.||.+......|.+|++|+|+|++||.|.
T Consensus 28 ~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~-p~C~-~~C~~-p~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~ 103 (124)
T 2yby_A 28 SIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEPE-VPCV-RKCVF-HYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQ 103 (124)
T ss_dssp CTTCEEEEEECTTEECTTCSSCEEEEEETTE-EESS-SCCE-EEEEE-CCCBTBCCCSSCEEEETTCEEECCBCTTCCCS
T ss_pred cCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccCC-Ccee-eECcC-CCCCCCeEecccCcccCCCEEEEECCCCCEec
Confidence 7899999999999999999 899999999 9984 9999 89997 46899988543344567999999999999999
Q ss_pred CCce-eeeccCCcccCCCCcee
Q psy11954 701 GHAR-RLCLENGTWSSGLPTCK 721 (881)
Q Consensus 701 G~~~-~~C~~~G~Ws~~~P~C~ 721 (881)
|... ++|+++| |++ +|+|+
T Consensus 104 G~~~~~~C~~~g-Ws~-~P~C~ 123 (124)
T 2yby_A 104 NGQDTMTCTENG-WSP-PPKCI 123 (124)
T ss_dssp SSSCEEEEETTE-EES-CSBCC
T ss_pred CCCCeEEcCCCC-cCC-CCeec
Confidence 9985 9999999 998 69996
No 65
>2yby_A Complement factor H; immune system, complement regulation, innate immunity, infec; 1.58A {Mus musculus}
Probab=99.72 E-value=2.4e-18 Score=160.44 Aligned_cols=110 Identities=21% Similarity=0.470 Sum_probs=93.9
Q ss_pred CCCCCCCCcceeeEeec----ccc--cCCCeEEEECCCCceeeCC---ceeEeC-CCcccCCCCcccccccCCCCCCcce
Q psy11954 278 ANCGSPDRHVNTTFVGT----VST--KLGSTISYACPEGNMLVGS---ATRTCK-EGFWTGVAPTCQYFQLQPMDVPNLV 347 (881)
Q Consensus 278 ~~C~~p~~~~ng~~~~~----~~~--~~gs~v~y~C~~Gy~l~G~---~~~~C~-~G~Ws~~~P~C~~~~~~p~~~~~~~ 347 (881)
+.|..| .++||.+... ..| .+|++|+|+|++||+|.|. .+++|+ +| |++. |.|+.
T Consensus 3 ~~C~~P-~i~nG~~~~~~~~~~~yp~~~g~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~~-p~C~~------------ 67 (124)
T 2yby_A 3 KPCEFP-QFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEPE-VPCVR------------ 67 (124)
T ss_dssp CCBCCC-CCTTEEETTHHHHGGGCSBCTTCEEEEEECTTEECTTCSSCEEEEEETTE-EESS-SCCEE------------
T ss_pred ccCCCC-cccCCEEEecccccccccccCCCEEEEECCCCCEeCCCCCccEEEecCCC-ccCC-Cceee------------
Confidence 578876 8999998742 234 8899999999999999999 899999 77 9995 99984
Q ss_pred eeeehhhhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEeCcc-eEEecCCCcccCCCCccc
Q psy11954 348 LYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGET-RRVCGDGGKWNGTEPQCL 423 (881)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~G~~-~~~C~~~G~Ws~~~P~C~ 423 (881)
.|+. +.++||.+......|.+|++|+|+|++||.|.|.. .++|+++| |++ .|+|+
T Consensus 68 ------------------~C~~-p~~~nG~~~~~~~~y~~g~~v~~~C~~Gy~l~G~~~~~~C~~~g-Ws~-~P~C~ 123 (124)
T 2yby_A 68 ------------------KCVF-HYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WSP-PPKCI 123 (124)
T ss_dssp ------------------EEEE-CCCBTBCCCSSCEEEETTCEEECCBCTTCCCSSSSCEEEEETTE-EES-CSBCC
T ss_pred ------------------ECcC-CCCCCCeEecccCcccCCCEEEEECCCCCEecCCCCeEEcCCCC-cCC-CCeec
Confidence 7875 67899987554446778999999999999999988 49999999 998 69996
No 66
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.71 E-value=4.7e-18 Score=158.47 Aligned_cols=94 Identities=24% Similarity=0.537 Sum_probs=79.7
Q ss_pred cccCCCEEEEEcCCCCeecCCC---ceEecCCCceecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCce
Q psy11954 622 TYKIGALVKYRCERGYKVEGEP---LSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYR 698 (881)
Q Consensus 622 ~~~~Gs~v~~~C~~GY~l~G~~---~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~ 698 (881)
.+.+|++|+|+|++||+|.|.+ .++|+++| |+. .|.|.++.|. | .+.||.+......|.+|++|+|+|++||+
T Consensus 28 p~~~G~~v~y~C~~Gy~l~g~~~~~~~~C~~~g-Ws~-~P~C~~~~c~-P-~i~nG~~~~~~~~y~~g~~v~y~C~~Gy~ 103 (125)
T 4ayi_A 28 PVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSP-AVPCLRKCYF-P-YLENGYNQNHGRKFVQGKSIDVACHPGYA 103 (125)
T ss_dssp SBCTTCEEEEEECTTEECTTSSSEEEEEEETTE-EES-SSCCEEEEEC-C-CCTTBCCTTTTCEEETTCEEECCBCTTCC
T ss_pred cccCCCEEEEEcCCCCEECCCCccCEEEeCCCc-ccC-CCCCcCcCCC-C-CCCCCEEeCCCCcccCCCEEEEEcCCCCE
Confidence 3568999999999999999975 47999877 995 6999998774 3 47899886655667789999999999999
Q ss_pred ec-CCceeeeccCCcccCCCCcee
Q psy11954 699 LE-GHARRLCLENGTWSSGLPTCK 721 (881)
Q Consensus 699 L~-G~~~~~C~~~G~Ws~~~P~C~ 721 (881)
|. |+.+++|+++| ||+ +|+|+
T Consensus 104 l~~g~~~~~C~~~g-Ws~-~P~Cv 125 (125)
T 4ayi_A 104 LPKAQTTVTCMENG-WSP-TPRCI 125 (125)
T ss_dssp CGGGCCEEEEETTE-EES-CCCCC
T ss_pred eCCCCceEEECCCc-ccC-cCEeC
Confidence 96 99999999777 995 79985
No 67
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.69 E-value=1e-16 Score=181.23 Aligned_cols=103 Identities=30% Similarity=0.760 Sum_probs=91.0
Q ss_pred ccccCCCEEEEEcCCCCee------cCCCceEecCCCceecCCCeeecccCCCCCCCCCceEEec--CCCeecCcEEEEE
Q psy11954 621 ATYKIGALVKYRCERGYKV------EGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT--SNATYYGTAVLYE 692 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l------~G~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~--~~~~~~g~~v~y~ 692 (881)
..|.+|++|+|+|++||.| .|+..++|+.+|+|+++.|+|+.+.|+.|+.+.||.+... ...+.||++|+|+
T Consensus 33 ~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~g~Ws~~~p~C~~~~C~~p~~~~ng~~~~~~~~~~~~~g~~v~~~ 112 (403)
T 1zjk_A 33 AKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYS 112 (403)
T ss_dssp SCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEE
T ss_pred CccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCCCEeCCCCCCcccccCCCCCCcCCccEEEccCCCCCccCCeEEEe
Confidence 4689999999999999999 5667899999999999999999999999999999998753 3456799999999
Q ss_pred cCCCc-eecCC-ceeeeccCCcccC-----CCCceeec
Q psy11954 693 CDENY-RLEGH-ARRLCLENGTWSS-----GLPTCKGN 723 (881)
Q Consensus 693 C~~Gy-~L~G~-~~~~C~~~G~Ws~-----~~P~C~~~ 723 (881)
|++|| .|.|. ..++|.++|.|+. ..|.|.+.
T Consensus 113 C~~gyy~l~~~~~~~~C~~~g~W~~~~~~~~~p~C~~~ 150 (403)
T 1zjk_A 113 CEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEPV 150 (403)
T ss_dssp ECTTTEEEESSCSEEEECTTSCEEETTCCCSCCEEEEC
T ss_pred CCCchhheecCCCCEEECCCcccccccCCccCCCCCCC
Confidence 99995 78777 8999999999997 47888776
No 68
>4ayi_A H factor 1, complement factor H; immune system, antigens; 2.31A {Homo sapiens} PDB: 4aye_A 4ayd_A 4aym_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Probab=99.69 E-value=1.2e-17 Score=155.74 Aligned_cols=95 Identities=22% Similarity=0.364 Sum_probs=79.3
Q ss_pred ccCCCeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCC
Q psy11954 760 SCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQY 838 (881)
Q Consensus 760 ~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy 838 (881)
+.+|++++| |++||+|.|.. ....++|+++| |+. .|.|..+.|+ |.+.||.+......|.+|++|+|+|++||
T Consensus 29 ~~~G~~v~y~C~~Gy~l~g~~--~~~~~~C~~~g-Ws~-~P~C~~~~c~--P~i~nG~~~~~~~~y~~g~~v~y~C~~Gy 102 (125)
T 4ayi_A 29 VAVGKYYSYYCDEHFETPSGS--YWDHIHCTQDG-WSP-AVPCLRKCYF--PYLENGYNQNHGRKFVQGKSIDVACHPGY 102 (125)
T ss_dssp BCTTCEEEEEECTTEECTTSS--SEEEEEEETTE-EES-SSCCEEEEEC--CCCTTBCCTTTTCEEETTCEEECCBCTTC
T ss_pred ccCCCEEEEEcCCCCEECCCC--ccCEEEeCCCc-ccC-CCCCcCcCCC--CCCCCCEEeCCCCcccCCCEEEEEcCCCC
Confidence 357999999 99999999972 22468999887 995 6999998884 35789987655556788999999999999
Q ss_pred EEc-CCCeeEeCCCCeecCCCCcee
Q psy11954 839 QRI-GPYLRKCMEDGSWSGDEPRCE 862 (881)
Q Consensus 839 ~l~-G~~~~~C~~~G~Ws~~~P~C~ 862 (881)
+|. |+.+++|+++| |++ +|+|+
T Consensus 103 ~l~~g~~~~~C~~~g-Ws~-~P~Cv 125 (125)
T 4ayi_A 103 ALPKAQTTVTCMENG-WSP-TPRCI 125 (125)
T ss_dssp CCGGGCCEEEEETTE-EES-CCCCC
T ss_pred EeCCCCceEEECCCc-ccC-cCEeC
Confidence 996 99999999877 995 79995
No 69
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.63 E-value=8e-16 Score=173.83 Aligned_cols=130 Identities=22% Similarity=0.452 Sum_probs=111.4
Q ss_pred eecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEE------cCCCceeeccCCcccCCcccccccccccceeccccc
Q psy11954 465 NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRL------VGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538 (881)
Q Consensus 465 ~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L------~G~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~ 538 (881)
.+.|++|+.+.||.+.+....|.+|++|+|+|++||.| .|+..++|+.+|+|+.+.|.|+
T Consensus 14 ~~~C~~p~~~~ng~~~~~~~~~~~g~~v~~~C~~Gy~l~~g~~~~g~~~~~C~~~g~Ws~~~p~C~-------------- 79 (403)
T 1zjk_A 14 AHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACS-------------- 79 (403)
T ss_dssp CCCBCCCCCCTTEEESSCCSCBCTTCEEEEEECTTEEEEETTEECSCCEEEBCSSSSBSSCCCEEE--------------
T ss_pred CccCcCCCCCCCceEcccCCccccCCEEEEEeCCCCEEccCCCcCCceeeEcCCCCEeCCCCCCcc--------------
Confidence 67999999999999988777799999999999999999 5677899999999999999999
Q ss_pred cccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCC
Q psy11954 539 VDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSAS 618 (881)
Q Consensus 539 ~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (881)
.+.|+.|+.+.||.+... .
T Consensus 80 ----~~~C~~p~~~~ng~~~~~---------------------------------------------------------~ 98 (403)
T 1zjk_A 80 ----IVDCGPPDDLPSGRVEYI---------------------------------------------------------T 98 (403)
T ss_dssp ----ECBCCSCCCCTTEEEEES---------------------------------------------------------S
T ss_pred ----cccCCCCCCcCCccEEEc---------------------------------------------------------c
Confidence 789999999999975421 0
Q ss_pred CcccccCCCEEEEEcCCCC-eecCC-CceEecCCCceec-----CCCeeecccCCCCCC
Q psy11954 619 SVATYKIGALVKYRCERGY-KVEGE-PLSTCEDTGSWSG-----SVPECIYVDCGNPET 670 (881)
Q Consensus 619 ~~~~~~~Gs~v~~~C~~GY-~l~G~-~~~tC~~~G~Ws~-----~~P~C~~v~C~~p~~ 670 (881)
....+.+|++|+|+|++|| .|.|. ..++|..+|.|+. ..|.|.+ .|+.+..
T Consensus 99 ~~~~~~~g~~v~~~C~~gyy~l~~~~~~~~C~~~g~W~~~~~~~~~p~C~~-~CG~~~~ 156 (403)
T 1zjk_A 99 GPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCEP-VCGLSAR 156 (403)
T ss_dssp STTCCBTTCEEEEEECTTTEEEESSCSEEEECTTSCEEETTCCCSCCEEEE-CCCCCSS
T ss_pred CCCCCccCCeEEEeCCCchhheecCCCCEEECCCcccccccCCccCCCCCC-CCCCCCC
Confidence 1235778999999999996 67776 7899999999997 4899987 6987753
No 70
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.59 E-value=1.8e-15 Score=126.57 Aligned_cols=71 Identities=20% Similarity=0.481 Sum_probs=66.3
Q ss_pred eecCCCccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCeeEeCCCCeecCCCCceeccCC
Q psy11954 794 WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFN 866 (881)
Q Consensus 794 Ws~~~p~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~ 866 (881)
|++..|+|+.+.|+.|+.+.||.+.. ..+.||++|+|+|++||.|.|+.+++|++||+|++.+|+|++++.
T Consensus 2 ws~~~p~C~~~~C~~p~~p~nG~~~~--~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~~cg 72 (73)
T 2ehf_A 2 SSGSSGEIEKGGCGDPGIPAYGKRTG--SSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSGPSS 72 (73)
T ss_dssp CCCCCCCCCCCCSCCCCCCSSSEEEC--SCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSCCCCBCCCCC
T ss_pred CCCCCCeEeeeECcCCCCCCCCEEeC--CcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCCCCeEecccC
Confidence 99999999999999999999999873 458899999999999999999999999999999999999998753
No 71
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.54 E-value=8.5e-15 Score=144.71 Aligned_cols=154 Identities=20% Similarity=0.334 Sum_probs=95.0
Q ss_pred cC-CCCCCCCCceEEecCCCeecCcEEEEEcCCCceecC--CceeeeccCC---cccCCCCceeecccCceeeeecCCee
Q psy11954 664 DC-GNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEG--HARRLCLENG---TWSSGLPTCKGNEGHARRLCLENGTW 737 (881)
Q Consensus 664 ~C-~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G--~~~~~C~~~G---~Ws~~~P~C~~~~g~~~~~C~~~g~w 737 (881)
.| ++|+.+.|+.+. ...|..|++|.|.|++||++.+ +..++|+.++ +|+. .+.|..+
T Consensus 2 ~C~g~PP~l~nA~~~--~~~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~-~~fC~~~-------------- 64 (217)
T 2b5i_D 2 LCDDDPPEIPHATFK--AMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN-QCQCTSS-------------- 64 (217)
T ss_dssp CCCSCCCCCTTEEEE--CSSBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC-CCCEEEC--------------
T ss_pred CCCCCCCCCcccccc--CccCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC-Cceeecc--------------
Confidence 47 788889998875 4568899999999999998874 6899998555 4997 8999887
Q ss_pred cCCCCcccCCCCCCccccCCCCccCCCeEEE-ccCCceeeccccCceeEEEEccCCeeecCCCccccccCCCCCCCCCce
Q psy11954 738 SSGLPTCKGCKTPKKSLTRPALSCLPGKRFY-YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGR 816 (881)
Q Consensus 738 s~~~p~C~~C~~p~~~~~~~~~~~~g~~v~~-C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~~p~~~~nG~ 816 (881)
.|..|. ..++. |...... ....++ ++.|......+. ..|+.|+.+.||.
T Consensus 65 --------~~~~~~------------~~v~p~~~e~~~~--------k~t~~q-~~~~~~~~~n~~-~~C~~PP~i~n~~ 114 (217)
T 2b5i_D 65 --------ATRQTT------------KQVTPQPEEQKER--------KTTEMQ-SPMQPVDQASLP-GHCREPPPWENEA 114 (217)
T ss_dssp --------------------------------------------------------------------CBCCCCCCSSCC
T ss_pred --------cccCcc------------cccccCchhhccc--------cccccc-cccCcccccccc-ccCCCCCcccccc
Confidence 333322 12233 4333321 112222 456666666664 3599999999987
Q ss_pred EEEccCcccCCCEEEEEcCCCC--EEcCCCeeEeCC-CC--eecCCCCceeccC
Q psy11954 817 VIIMNQTTTYNSAVEYHCVPQY--QRIGPYLRKCME-DG--SWSGDEPRCEKRF 865 (881)
Q Consensus 817 ~~~~~~~~~~g~~v~f~C~~Gy--~l~G~~~~~C~~-~G--~Ws~~~P~C~~~~ 865 (881)
+. ....|.+|++|+|+|++|| .|.|+.+++|.. +| .|+.++|.|+...
T Consensus 115 l~-~~~~y~~Gs~V~Y~C~eGY~~ll~G~~~~~C~~~~G~~~WS~p~p~C~~~~ 167 (217)
T 2b5i_D 115 TE-RIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTGEM 167 (217)
T ss_dssp SS-CCEECCTTCEEEEEECTTCEEEESSCSEEEEEECSSCEEECCCCEEEEC--
T ss_pred cc-ccccccCCCEEEEECcCCchhcccCCcceEeecCCCccccCCCCcceEecc
Confidence 64 2345788999999999999 479999999974 56 8999999999874
No 72
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple domains protein 1, CSMD1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=2e-14 Score=120.16 Aligned_cols=69 Identities=30% Similarity=0.573 Sum_probs=65.2
Q ss_pred eecCCCeeecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec
Q psy11954 653 WSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN 723 (881)
Q Consensus 653 Ws~~~P~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~ 723 (881)
|++..|+|+++.|+.|+.+.||.+. ...|.+|++|+|+|++||+|.|+..++|+++|+|++++|+|+++
T Consensus 2 ws~~~p~C~~~~C~~p~~p~nG~~~--~~~~~~g~~v~f~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~~ 70 (73)
T 2ehf_A 2 SSGSSGEIEKGGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSGP 70 (73)
T ss_dssp CCCCCCCCCCCCSCCCCCCSSSEEE--CSCCCTTCEEEEECCSSCCBCSCSEEEBCSSSSBSSCCCCBCCC
T ss_pred CCCCCCeEeeeECcCCCCCCCCEEe--CCcccCCCEEEEEcCCCCEEeCCCeEEECCCCeECCCCCeEecc
Confidence 9999999999999999999999997 35678999999999999999999999999999999999999987
No 73
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=2.9e-14 Score=119.55 Aligned_cols=71 Identities=31% Similarity=0.521 Sum_probs=64.5
Q ss_pred cccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCCeeEeCCCCeecCCCCceeccCCCCCCC
Q psy11954 801 CKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIPG 871 (881)
Q Consensus 801 C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~~~~~~~ 871 (881)
+.++.|+.|+.+.||.+......+.||++|+|+|++||.|.|+.+++|++||+|++.+|+|+++.|+.++.
T Consensus 3 s~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~v~C~~P~~ 73 (74)
T 2yra_A 3 SGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEESGPSS 73 (74)
T ss_dssp CCCCCCCCCCCCTTEEECCSSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSCCCEEEECSCCSSSC
T ss_pred ccCCcCcCCCCCCCeEEeccCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCCCCEEeecCCcCCCC
Confidence 56789999999999998765556889999999999999999999999999999999999999999987764
No 74
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin domain, cytokine-cytokine REC complex; HET: NAG; 2.30A {Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I 3iu3_I 1z92_B 2erj_A*
Probab=99.47 E-value=6.7e-14 Score=138.34 Aligned_cols=143 Identities=18% Similarity=0.302 Sum_probs=95.0
Q ss_pred CC-CCCCCcceeeEeecccccCCCeEEEECCCCceeeC--CceeEeCCCc----ccCCCCcccccccCCCC---------
Q psy11954 279 NC-GSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVG--SATRTCKEGF----WTGVAPTCQYFQLQPMD--------- 342 (881)
Q Consensus 279 ~C-~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~l~G--~~~~~C~~G~----Ws~~~P~C~~~~~~p~~--------- 342 (881)
.| +.|+.+.|+.+... .|..|++|.|.|+.||+.++ +..++|.+|. |+. .+.|....+....
T Consensus 2 ~C~g~PP~l~nA~~~~~-~Y~~Gt~V~Y~C~~Gf~r~~~~s~~i~C~~~~~~~~Wt~-~~fC~~~~~~~~~~~v~p~~~e 79 (217)
T 2b5i_D 2 LCDDDPPEIPHATFKAM-AYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDN-QCQCTSSATRQTTKQVTPQPEE 79 (217)
T ss_dssp CCCSCCCCCTTEEEECS-SBCTTCEEECCCCTTEEECTTCCSEEEBC-----CCBSC-CCCEEEC---------------
T ss_pred CCCCCCCCCccccccCc-cCCCCCEEEEECCCCceeCCCCCceEEecCCCCcccccC-CceeecccccCcccccccCchh
Confidence 47 78889999987654 89999999999999998875 6799999665 998 7899764211100
Q ss_pred CCcceeeeehhhhhhhccccccccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCc--EEeCcceEEecC-CC--cccC
Q psy11954 343 VPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENY--TLIGETRRVCGD-GG--KWNG 417 (881)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy--~l~G~~~~~C~~-~G--~Ws~ 417 (881)
..+.......+.............|..||.+.||.+. ....|.+|++|.|.|++|| .|+|+.+++|.. +| .|+.
T Consensus 80 ~~~~k~t~~q~~~~~~~~~n~~~~C~~PP~i~n~~l~-~~~~y~~Gs~V~Y~C~eGY~~ll~G~~~~~C~~~~G~~~WS~ 158 (217)
T 2b5i_D 80 QKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATE-RIYHFVVGQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQ 158 (217)
T ss_dssp -----------------------CBCCCCCCSSCCSS-CCEECCTTCEEEEEECTTCEEEESSCSEEEEEECSSCEEECC
T ss_pred hccccccccccccCccccccccccCCCCCcccccccc-ccccccCCCEEEEECcCCchhcccCCcceEeecCCCccccCC
Confidence 0000000000000000000111269999999998764 2346899999999999999 568999999985 45 8999
Q ss_pred CCCcccc
Q psy11954 418 TEPQCLF 424 (881)
Q Consensus 418 ~~P~C~~ 424 (881)
+.|.|+.
T Consensus 159 p~p~C~~ 165 (217)
T 2b5i_D 159 PQLICTG 165 (217)
T ss_dssp CCEEEEC
T ss_pred CCcceEe
Confidence 8899985
No 75
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=99.47 E-value=7.9e-14 Score=134.32 Aligned_cols=131 Identities=17% Similarity=0.202 Sum_probs=94.5
Q ss_pred cCCCCceeccCCCC---CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEE
Q psy11954 23 ALRRPTNQSSTIRG---APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIR 99 (881)
Q Consensus 23 A~~k~a~qSS~~~~---~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~ 99 (881)
+-+.++++||.... +.|.+|+||+.++.|.+..+..+ ...++||+|||++++.|.+|+|..|.+....++..|+|.
T Consensus 9 ~~~~~~tass~~~~~~~~~~~~~~DG~~~t~w~s~~~~~~-~~~~~~l~iDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~ 87 (150)
T 2j1a_A 9 PRTVKITASSEETSGENAPASFASDGDMNTFWHSKWSSPA-HEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVS 87 (150)
T ss_dssp CCEEEEEESCCBCSSSCBCGGGGSSSCTTCCEECCCSSSC-CCSCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEE
T ss_pred cccCEEEEecccCCCCCCcHHhcCcCCCCCcEEccccCCC-CCCCeEEEEECCCCeEEeEEEEeecCCCCCCCEEEEEEE
Confidence 34567889988764 67999999999999977766543 357899999999999999999999976444577889999
Q ss_pred EccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec----
Q psy11954 100 VGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG---- 175 (881)
Q Consensus 100 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g---- 175 (881)
++++.. .|+.+ ..+ .+ ...+....+.+. ++.+|||||.+..
T Consensus 88 ~S~Dg~--------------~w~~v-----~~~------------~~---~~~~~~~~~~~~-~~~aryvRi~~~~~~~~ 132 (150)
T 2j1a_A 88 VSLDGE--------------NFTEV-----KTG------------TL---EDNAAIKFIEFD-SVDAKYVRLDVTDSVSD 132 (150)
T ss_dssp EESSSS--------------SEEEE-----EEE------------EC---CSSSSCEEEEEE-EEEEEEEEEEEEEEECC
T ss_pred EEcCCC--------------ceEEE-----EEe------------eE---CCCCceEEEEEC-CeEEEEEEEEEEecccc
Confidence 887632 11111 110 00 011223444444 6899999999983
Q ss_pred ----CccceEeeEEEeec
Q psy11954 176 ----VEGSLSLCEVEIFT 189 (881)
Q Consensus 176 ----~~~~l~l~EveV~g 189 (881)
...+++|+||+|||
T Consensus 133 ~~~~~~~~~~i~Ei~v~G 150 (150)
T 2j1a_A 133 QANGRGKFATAAEVNVHG 150 (150)
T ss_dssp C--CTTTCCEESEEEEEC
T ss_pred cccCCCceEEEEEEEEeC
Confidence 23479999999997
No 76
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.46 E-value=2e-13 Score=153.90 Aligned_cols=103 Identities=29% Similarity=0.779 Sum_probs=86.6
Q ss_pred ccccCCCEEEEEcCCCCeec-C-----CCceEecCCCceecCCCeeecccCCCCCCCCCceEEecC--CCeecCcEEEEE
Q psy11954 621 ATYKIGALVKYRCERGYKVE-G-----EPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTS--NATYYGTAVLYE 692 (881)
Q Consensus 621 ~~~~~Gs~v~~~C~~GY~l~-G-----~~~~tC~~~G~Ws~~~P~C~~v~C~~p~~~~nG~~~~~~--~~~~~g~~v~y~ 692 (881)
..|.+|++|+|+|++||+|. | +..++|+.+|+|+...|.|+.+.|+.|+.+.||.+.... ..+.|++.++|.
T Consensus 20 ~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~~~~C~~p~~~~nG~~~~~~~~~~~~~~~~v~y~ 99 (399)
T 1gpz_A 20 PQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYY 99 (399)
T ss_dssp SSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEEECBCCSCCCCTTEEEEESSSTTCCBTTCEEEEE
T ss_pred CceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCceeeeeCCCCCCCCCcceEeecCCCCceeeEEEEEe
Confidence 57899999999999999995 4 346779999999999999999999999999999887532 446689999999
Q ss_pred cCCCc-eecC--------CceeeeccCCcccCC-----CCceeec
Q psy11954 693 CDENY-RLEG--------HARRLCLENGTWSSG-----LPTCKGN 723 (881)
Q Consensus 693 C~~Gy-~L~G--------~~~~~C~~~G~Ws~~-----~P~C~~~ 723 (881)
|++|| .|.+ ...++|..+|.|+.+ .|.|.+.
T Consensus 100 C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~~ 144 (399)
T 1gpz_A 100 CHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPV 144 (399)
T ss_dssp ECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEEC
T ss_pred cCCchhccccccCcccccCceEEECCCceEeccccccccCCccCC
Confidence 99999 4443 467899999999864 6778766
No 77
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=99.44 E-value=1.1e-13 Score=164.90 Aligned_cols=130 Identities=15% Similarity=0.291 Sum_probs=94.4
Q ss_pred CcccccccCCCCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcc
Q psy11954 16 FISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQD 95 (881)
Q Consensus 16 ~~~~~nlA~~k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~ 95 (881)
...+.|||+||++++||+..+..|++|+||+..++|.+. +..+|++||||+.+.|++|+|.+.. .....
T Consensus 21 ~~~~~NLA~gk~vTASS~~~g~~p~nAvDGn~~T~WsS~-------~~~qWLqVDLG~~~~V~~V~l~~~~----~~v~~ 89 (914)
T 4a4a_A 21 MASGVEITEGVTVTAKGNTEGNTADLAIDGDLSTYWESS-------NDYKWIEVDLGGIYELSKIEIFNKD----EAVYK 89 (914)
T ss_dssp ---CCBCCSSCEEEESCCCTTCCGGGGSSSCTTCCEECC-------SSCCEEEEEEEEEEEEEEEEEECSS----SSCEE
T ss_pred CCccccccCCCceEEeccCCCCcHHHeECCCCCCeEecC-------CCCceEEEECCCeEEEEEEEEEecC----CceEE
Confidence 446799999999999999877899999999999999654 4679999999999999999998532 35667
Q ss_pred cEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCcc--CCCceEEEeCCCCCcceEEEEEE
Q psy11954 96 LEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTL--EEGITKSFTCARTLVGQNVFIQL 173 (881)
Q Consensus 96 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~gRyV~i~~ 173 (881)
|+|.++++.. .|+.+.+. ..+.. ..+..+.| .+++||||||++
T Consensus 90 Y~Ie~S~DG~--------------~Wt~v~~~------------------t~~~~~~~~~d~v~f---~pv~ARYVRL~~ 134 (914)
T 4a4a_A 90 YNIYASEDGE--------------NFNKIAYK------------------NNDNVSDSNGNMHTI---DNVRAGKIRIDV 134 (914)
T ss_dssp EEEEEESSSS--------------CCEEEEEE------------------CSCCCCCTTCEEEEE---EEEEEEEEEEEE
T ss_pred EEEEEEcCCC--------------CeEEEEEc------------------ccCccCCCccceEEe---CCceEEEEEEEE
Confidence 8887776632 22222111 00011 11234444 378999999998
Q ss_pred ecCc--cceEeeEEEeeccc
Q psy11954 174 VGVE--GSLSLCEVEIFTTD 191 (881)
Q Consensus 174 ~g~~--~~l~l~EveV~g~~ 191 (881)
.+.. ...+|.|++|||..
T Consensus 135 t~~~~~~~~SI~EfeVyG~~ 154 (914)
T 4a4a_A 135 VQNSNSDRVNIAEINVFGKN 154 (914)
T ss_dssp EEETTCSSCEESEEEEEEEE
T ss_pred EecCCCCceEEEEEEEEcCC
Confidence 7533 47899999999975
No 78
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=4.5e-13 Score=131.91 Aligned_cols=124 Identities=14% Similarity=0.160 Sum_probs=87.4
Q ss_pred CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCCCCCCCccCCC
Q psy11954 37 APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFP 116 (881)
Q Consensus 37 ~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~~~~~~~~~~ 116 (881)
+.|.+|+||+.++.|.+... .+....+.||+|||++++.|.+|+|..|.+....++..++|.++++..
T Consensus 38 g~~~~a~DG~~~T~W~s~~~-~~~~~~p~wi~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~I~~S~Dg~----------- 105 (169)
T 3ggl_A 38 GLAKCLIDGDTETFWHAKWQ-GGSDPLPYDIVIDMKQNIQIAQVELLPRGRGSNNPIKVVEFAASEDNV----------- 105 (169)
T ss_dssp BSGGGGGSSCSSCCEECCCS-SCCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESSSS-----------
T ss_pred CcHHhcCCCCCCCceEccCc-CCCCCCCEEEEEECCCcEEEeEEEEEecCCCCCCCeeEEEEEEeCCCC-----------
Confidence 46899999999999965431 112345679999999999999999999987556788899999987632
Q ss_pred CCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc---cceEeeEEEeecccch
Q psy11954 117 GTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE---GSLSLCEVEIFTTDGE 193 (881)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~---~~l~l~EveV~g~~~~ 193 (881)
.|+.+ +.... ...+....+.+. ++.+|||||.+.... .+++|+||+||+....
T Consensus 106 ---~W~~v-------------------~~~~~-~~~~~~~~~~f~-~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~~~~~ 161 (169)
T 3ggl_A 106 ---NWTPI-------------------GRFGF-TNQDAALEYYVK-SIKARYIRLTIPDDGGNSTVAAIRELDVKGTIIN 161 (169)
T ss_dssp ---CCEEE-------------------EEEEC-CCCSSCEEECCC-CEEEEEEEEEECSSSSCCSCCEEEEEEEEEEECC
T ss_pred ---CcEEe-------------------EEEEe-ccCCCcEEEEec-CceEEEEEEEEEeCCCCCceEEEEEEEEEcCCCC
Confidence 12221 11110 011234456665 799999999998653 3799999999999877
Q ss_pred hhh
Q psy11954 194 LER 196 (881)
Q Consensus 194 l~~ 196 (881)
|..
T Consensus 162 ~~~ 164 (169)
T 3ggl_A 162 LEH 164 (169)
T ss_dssp ---
T ss_pred ccc
Confidence 764
No 79
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.43 E-value=5.3e-13 Score=150.51 Aligned_cols=128 Identities=22% Similarity=0.547 Sum_probs=102.5
Q ss_pred ecCCCCCCCCCCc-eeeccCceecCcEEEEEcCCCcEEc-C-----CCceeeccCCcccCCcccccccccccceeccccc
Q psy11954 466 IDCGRLTAIPYGS-ISYLNETTYLGSEVLYSCSRNYRLV-G-----HPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538 (881)
Q Consensus 466 i~C~~p~~~~nG~-~~~~~~~~~~gs~v~y~C~~Gy~L~-G-----~~~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~~~~ 538 (881)
+.|++|+.+.||. +......|.+|++|+|+|++||.|+ | +..++|+.||+|+...|.|+
T Consensus 1 i~C~~p~~~~n~~~~~~~~~~y~~g~~v~~~C~~Gy~l~~g~~~~~s~~~~C~~~g~W~~~~p~C~-------------- 66 (399)
T 1gpz_A 1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCK-------------- 66 (399)
T ss_dssp CCBCCCCCSSTTEEEESCCSSBCTTCEEEEEECTTEEEESSSCEESCEEEEBCTTSCBSSCCCEEE--------------
T ss_pred CCCcCCCCCCCCCCcCCCCCceecCCEEEEEecCCcEEecCCcccceeeEecCCCCcccCcCCcee--------------
Confidence 5799999999954 4455567899999999999999996 5 34567999999999999999
Q ss_pred cccccccCCCCCCCCCeeEEEeccccccCceEEEecCCCCccceeeecCCCCCCcceeeeeecCCccccceeeeccCCCC
Q psy11954 539 VDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSAS 618 (881)
Q Consensus 539 ~~~~~i~C~~p~~~~ng~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (881)
.+.|+.|+.+.||.+....
T Consensus 67 ----~~~C~~p~~~~nG~~~~~~--------------------------------------------------------- 85 (399)
T 1gpz_A 67 ----IKDCGQPRNLPNGDFRYTT--------------------------------------------------------- 85 (399)
T ss_dssp ----ECBCCSCCCCTTEEEEESS---------------------------------------------------------
T ss_pred ----eeeCCCCCCCCCcceEeec---------------------------------------------------------
Confidence 7899999999999753210
Q ss_pred CcccccCCCEEEEEcCCCCe-ecC--------CCceEecCCCceecC-----CCeeecccCCCCC
Q psy11954 619 SVATYKIGALVKYRCERGYK-VEG--------EPLSTCEDTGSWSGS-----VPECIYVDCGNPE 669 (881)
Q Consensus 619 ~~~~~~~Gs~v~~~C~~GY~-l~G--------~~~~tC~~~G~Ws~~-----~P~C~~v~C~~p~ 669 (881)
....+.+++.++|.|++||. +.+ ...++|..+|.|+.+ .|.|.+ .|+.+.
T Consensus 86 ~~~~~~~~~~v~y~C~~gy~~l~~~~~~~~~~~g~~~C~~~g~w~~~~~~~~~p~C~~-~CG~~~ 149 (399)
T 1gpz_A 86 TMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLP-VCGKPV 149 (399)
T ss_dssp STTCCBTTCEEEEEECTTTEEEEC-------CCCEEEECTTSSEEESSSCSSCCEEEE-CCSCCS
T ss_pred CCCCceeeEEEEEecCCchhccccccCcccccCceEEECCCceEeccccccccCCccC-CCCCcC
Confidence 11356789999999999993 432 467899999999875 689987 598763
No 80
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain, SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=2.8e-13 Score=113.52 Aligned_cols=64 Identities=25% Similarity=0.482 Sum_probs=58.9
Q ss_pred eecccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec
Q psy11954 660 CIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN 723 (881)
Q Consensus 660 C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~ 723 (881)
+.++.|+.|+.+.||.+......|.+|++|+|+|++||+|.|+.+++|+++|+|++..|+|+.+
T Consensus 3 s~~~~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~g~Ws~~~P~C~~v 66 (74)
T 2yra_A 3 SGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKT 66 (74)
T ss_dssp CCCCCCCCCCCCTTEEECCSSSSCCTTCEEEEEECTTEEEESCSEEEBCTTSCBSSCCCEEEEC
T ss_pred ccCCcCcCCCCCCCeEEeccCCCccCCCEEEEECCCCCEECCCCceEECCCCEECCCCCEEeec
Confidence 5568899999999999987555678999999999999999999999999999999999999998
No 81
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=99.40 E-value=1.1e-12 Score=127.68 Aligned_cols=124 Identities=11% Similarity=0.148 Sum_probs=86.3
Q ss_pred CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCCCCCCCccCCC
Q psy11954 37 APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFP 116 (881)
Q Consensus 37 ~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~~~~~~~~~~ 116 (881)
+.|.+|+||+.++.|.+... .+....+.||+|||++++.|++|+|..|.+....++..|+|.++++..
T Consensus 28 g~~~~a~DG~~~T~W~s~~~-~~~~~~p~~i~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~I~~S~Dg~----------- 95 (159)
T 3f2z_A 28 GHAKHLIDGNIETFWHSRWQ-GGSDPLPYEIIIDMNHRVKIAQIELLPRGRGSNNPIKVVRFEASEDGT----------- 95 (159)
T ss_dssp BSGGGGSSSCTTCCEECCCT-TCCCCSCEEEEEEEEEEEEEEEEEEEECCTTCCCCCCEEEEEEESSSS-----------
T ss_pred CcHHhcCCCCCCCeEEcCCc-CCCCCCCEEEEEECCCceEEEEEEEEecCCCCCCCeeEEEEEEEcCCC-----------
Confidence 56899999999999965421 111235569999999999999999999986555678899999987632
Q ss_pred CCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc---cceEeeEEEeecccch
Q psy11954 117 GTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE---GSLSLCEVEIFTTDGE 193 (881)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~---~~l~l~EveV~g~~~~ 193 (881)
.|+.+ +..... ..+....+.+. ++.+|||||.+.... .+++|+||+||+....
T Consensus 96 ---~W~~v-------------------~~~~~~-~~~~~~~~~~~-~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~~~~~ 151 (159)
T 3f2z_A 96 ---NWESI-------------------GQFGFT-NQDAALKYYVK-SSTARYIKLVIPDGVGNGTVAAIRELDVRGTVVN 151 (159)
T ss_dssp ---SCEEE-------------------EEEECC-CCSSCEEECCC-CEEEEEEEEEECSSSSCCSCCEEEEEEEEEEECC
T ss_pred ---CeEEe-------------------EEeecC-CCCccEEEecC-CceEEEEEEEEEeccCCCceEEEEEEEEEcCCCC
Confidence 12211 111100 11234455554 899999999998653 3799999999998877
Q ss_pred hhh
Q psy11954 194 LER 196 (881)
Q Consensus 194 l~~ 196 (881)
|..
T Consensus 152 ~~~ 154 (159)
T 3f2z_A 152 LEH 154 (159)
T ss_dssp ---
T ss_pred ccc
Confidence 664
No 82
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=99.36 E-value=4.1e-13 Score=110.43 Aligned_cols=64 Identities=25% Similarity=0.594 Sum_probs=55.3
Q ss_pred CccccccCC-CCCCCCCceEEEc--cCcccCCCEEEEEcCCCCEEcCCCeeEeCCCCeecCCCCceecc
Q psy11954 799 PTCKAIDCS-HPGSIDNGRVIIM--NQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKR 864 (881)
Q Consensus 799 p~C~~v~C~-~p~~~~nG~~~~~--~~~~~~g~~v~f~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~ 864 (881)
|+|+ +.|+ +|+.+.||.+... ...|.||++|+|+|++||.|.|+.+++|+ ||+|++.+|+|+.+
T Consensus 2 ~~C~-~~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~~~~~C~-~g~Ws~~~P~C~~i 68 (68)
T 1srz_A 2 AEFV-RICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHCQVN 68 (68)
T ss_dssp CCSS-SSCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSCCCCEEEC
T ss_pred Ccce-eECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCCCcCEEC-CCEEeCCCCEeeEC
Confidence 6786 6895 5678999999853 23478999999999999999999999999 99999999999864
No 83
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=99.36 E-value=1.6e-12 Score=112.22 Aligned_cols=71 Identities=27% Similarity=0.504 Sum_probs=60.2
Q ss_pred ccccccCCCCCCCCCceEEEc--cCcccCCCEEEEEcCCC-CEEcCC-CeeEeCCCCeec-----CCCCceeccCCCCCC
Q psy11954 800 TCKAIDCSHPGSIDNGRVIIM--NQTTTYNSAVEYHCVPQ-YQRIGP-YLRKCMEDGSWS-----GDEPRCEKRFNSGIP 870 (881)
Q Consensus 800 ~C~~v~C~~p~~~~nG~~~~~--~~~~~~g~~v~f~C~~G-y~l~G~-~~~~C~~~G~Ws-----~~~P~C~~~~~~~~~ 870 (881)
.|+.+.|+.|+.+.||.+... ...+.||++|+|+|++| |.|.|+ .+++|++||+|+ +.+|+|+++ |..++
T Consensus 2 ~C~~v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~~P~C~~v-Cg~P~ 80 (86)
T 3tvj_A 2 SMTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEPV-CGLSA 80 (86)
T ss_dssp --CCCBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCSCCCEEEC-CCCCC
T ss_pred eeeeeeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCCCCeeECc-CCCCC
Confidence 689999999999999998853 34589999999999995 889999 999999999999 789999998 55444
Q ss_pred C
Q psy11954 871 G 871 (881)
Q Consensus 871 ~ 871 (881)
.
T Consensus 81 ~ 81 (86)
T 3tvj_A 81 R 81 (86)
T ss_dssp C
T ss_pred c
Confidence 4
No 84
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=99.35 E-value=1.4e-12 Score=124.91 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=89.3
Q ss_pred cCCCCceeccCC--CCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEE
Q psy11954 23 ALRRPTNQSSTI--RGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRV 100 (881)
Q Consensus 23 A~~k~a~qSS~~--~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v 100 (881)
|..+++++||.. .+..|.+|+||+.++.|... . + +||+|||++++.|+.|+|..+.+ .++...|+|.+
T Consensus 8 ~~~~~vtASs~~~~~~~~~~~a~Dg~~~t~W~~~----~--~--~~l~vDLg~~~~v~~v~i~~~~~--~~~~~~~~i~~ 77 (145)
T 2jda_A 8 AQIVAVTASGYDSEKGHVPANIADGDVKTRWAAS----G--E--SWVQLELDKEQSIENILIVPFKP--TERKLKFSIFY 77 (145)
T ss_dssp CCEEEEEESCCBTTTTBCGGGGGSSCTTCCEEEE----S--S--EEEEEEEEEEEEEEEEEEEESST--TTCCEEEEEEE
T ss_pred cceEEEEEeecccCCCCCchhcccCCCCCeECCC----C--C--eeEEEECCCceEEEEEEEEeccC--CCceEEEEEEE
Confidence 456889999986 45789999999999988532 1 2 99999999999999999998853 35788899988
Q ss_pred ccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc--c
Q psy11954 101 GNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE--G 178 (881)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~--~ 178 (881)
+.+.. .|+++.+.. .. ....+....+.+ .++.+|||||.+.+.. .
T Consensus 78 S~Dg~--------------~w~~~~~~~-----------------~~-~~~~~~~~~~~f-~~~~aryvRi~~~~~~~~~ 124 (145)
T 2jda_A 78 SNDGK--------------NWQPLAEGL-----------------ET-SSADKNGEKLTF-TPVTAKYIKLDTFGTDVNN 124 (145)
T ss_dssp ESSSS--------------SCEEEEEEE-----------------EC-CCSCSSCEEEEE-EEEEEEEEEEEEEEESSSS
T ss_pred eCCCC--------------ceEEeeeCc-----------------cc-cCCCCccEEEEe-CcccEEEEEEEEECCCCCc
Confidence 76622 122221110 00 011112334444 4789999999998643 2
Q ss_pred ceEeeEEEeeccc
Q psy11954 179 SLSLCEVEIFTTD 191 (881)
Q Consensus 179 ~l~l~EveV~g~~ 191 (881)
.++|+||+||+..
T Consensus 125 ~~~i~Ei~v~g~~ 137 (145)
T 2jda_A 125 WSAINEIAINSAA 137 (145)
T ss_dssp EEEEEEEEESCCC
T ss_pred EeEEEEEEEECCC
Confidence 5899999999875
No 85
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=99.35 E-value=1.3e-12 Score=127.26 Aligned_cols=128 Identities=16% Similarity=0.150 Sum_probs=89.2
Q ss_pred CCCceeccCCCC----CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEE
Q psy11954 25 RRPTNQSSTIRG----APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRV 100 (881)
Q Consensus 25 ~k~a~qSS~~~~----~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v 100 (881)
+-++++||...+ +.+.+|+||+.++.|.+.... ......|++|||++++.|.+|+|..|.+....+...++|.+
T Consensus 29 ~wtvtAsS~~~~~~~~~~~~~a~DG~~~T~W~s~~~~--~~~~p~~i~iDLg~~~~I~~v~~~~r~~~~~~~~~~y~I~~ 106 (161)
T 4a41_A 29 NMKATATSEHPDVGNEGLAKFAIDGKENTIWHTKYNP--VEELPQSITLELGGSYEINKFTYLPRSGAKNGNITKYELHV 106 (161)
T ss_dssp GCEEEESCCCCCSSSCCCGGGGGSSCTTCCEECCTTT--TCCSCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEE
T ss_pred CCEEEEeccCCCCCCCCcHHHcCcCCCCCeEEeCCCC--CCCCCEEEEEEcCCCEEEeEEEEEecCCCCCCcEEEEEEEE
Confidence 456888888764 679999999999999654321 12356799999999999999999999764445677889988
Q ss_pred ccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC-ccc
Q psy11954 101 GNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV-EGS 179 (881)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~-~~~ 179 (881)
+++.. .|+.+ +... ....+....+.+. ++.+|||||.+... ..+
T Consensus 107 S~DG~--------------~W~~v-------------------~~g~-~~~~~~~~~~~f~-~v~aRYVRi~~~~~~~~~ 151 (161)
T 4a41_A 107 SEDGN--------------NFRKI-------------------SEGN-WDDSGSLKTLKFN-STKATHVKLVALEGVGGF 151 (161)
T ss_dssp ESSSS--------------CEEEE-------------------EEEE-CCSSSSCEEEEEE-EEEEEEEEEEEEEEGGGC
T ss_pred ECCCC--------------ceEEe-------------------eeee-ecCCCcEEEEEeC-CceEEEEEEEEEEccCCe
Confidence 76632 11111 1100 0011223444554 68999999999843 347
Q ss_pred eEeeEEEeec
Q psy11954 180 LSLCEVEIFT 189 (881)
Q Consensus 180 l~l~EveV~g 189 (881)
++|+||+||.
T Consensus 152 ~si~E~~Vya 161 (161)
T 4a41_A 152 ASAAELNVFA 161 (161)
T ss_dssp CEESEEEEEC
T ss_pred EEeEeEEEEC
Confidence 8999999995
No 86
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=99.35 E-value=8.2e-13 Score=126.11 Aligned_cols=125 Identities=19% Similarity=0.239 Sum_probs=88.4
Q ss_pred ceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCCC
Q psy11954 28 TNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQ 107 (881)
Q Consensus 28 a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~ 107 (881)
|++||....+.+.+|+||+.++.|.+..|..+. .++|++|||++++.|++|+|..|.+....+...|+|.++++...
T Consensus 18 asss~~~~~~~~~~~~Dg~~~t~w~~~w~~~~~--~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~~i~~S~Dg~~- 94 (143)
T 2v72_A 18 ASATSEEGQDPASSAIDGNINTMWHTKWNGSDA--LPQSLSVNLGKARKVSSIAITPRTSGNNGFITKYEIHAINNGVE- 94 (143)
T ss_dssp EEESSCBTTBCGGGGSSSCTTCCEECCTTSCSC--SCEEEEEEEEEEEEEEEEEEECCSSCCTTCEEEEEEEEEETTEE-
T ss_pred EEEecccCCChHHhccCCCCCCceecCCCCCCC--CCEEEEEECCCCeEEeEEEEEecccCCCCCEEEEEEEEEcCCCc-
Confidence 444443445678999999999999777766543 78999999999999999999999764446778899998876220
Q ss_pred CCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc-cceEeeEEE
Q psy11954 108 KNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE-GSLSLCEVE 186 (881)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~-~~l~l~Eve 186 (881)
.++..|+ + ...+....+.+..++.+|||||.+.... .+++|+||+
T Consensus 95 -------------------~~v~~g~------------~---~~~~~~~~~~f~~p~~aRyvRi~~~~~~~~~~~i~Ei~ 140 (143)
T 2v72_A 95 -------------------TLVAEGT------------W---EENNLVKTVTFDSPIDAEEIKITAIQGVGGFASIAELN 140 (143)
T ss_dssp -------------------EEEEEEE------------C---CSSSSCEEEEEEEEEEEEEEEEEEEEEGGGCCEESEEE
T ss_pred -------------------cEEeEEE------------E---cCCCceEEEEeCCCCcEEEEEEEEEEcCCCeEEEEEEE
Confidence 0111110 0 0112344455555689999999998643 479999999
Q ss_pred eec
Q psy11954 187 IFT 189 (881)
Q Consensus 187 V~g 189 (881)
||.
T Consensus 141 v~~ 143 (143)
T 2v72_A 141 VYE 143 (143)
T ss_dssp EEC
T ss_pred EEC
Confidence 983
No 87
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=99.30 E-value=2.9e-12 Score=144.71 Aligned_cols=138 Identities=10% Similarity=0.035 Sum_probs=101.5
Q ss_pred ccccccCCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCccc
Q psy11954 18 SGTNVALRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDL 96 (881)
Q Consensus 18 ~~~nlA~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~ 96 (881)
-+.|||++|++++||... .+.|++|+||+..|.|.+. ..+..+|++|||+++.+|++|+|..+.. ..+|...|
T Consensus 323 f~~NLA~~~~vtASS~~~~~~~~~~a~Dgd~~TyW~a~-----~~~~~~wl~vDLg~~~~vn~V~lqe~i~-~gqrv~~y 396 (469)
T 3eyp_A 323 FSTNLLRGAKVKATNVRGAKYSPEKMLDNEKNTYFAGK-----DGEVKADIIFTLPKTIEFDCLMIEEVIE-LGHRTTKW 396 (469)
T ss_dssp HSCCTTTTCEEEESSCCCGGGCGGGGGSCCSSCCEECC-----TTCCCEEEEEEEEEEEEEEEEEEEECGG-GCSCEEEE
T ss_pred cCcchhcCCceEEeeccCCCCChhhcccCCCCceEeCC-----CCCCCcEEEEECCCCcEEeEEEEeeccc-CCCCeEEE
Confidence 468999999999999887 5789999999999999654 2346889999999999999999986633 23688899
Q ss_pred EEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC
Q psy11954 97 EIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV 176 (881)
Q Consensus 97 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~ 176 (881)
+|.++++.. .|+.|.+. ......|....+.++ ++++|||||++...
T Consensus 397 ~Ve~s~DG~--------------~W~~v~~g-------------------t~~~tiG~kr~~~f~-~v~aryVRl~i~~~ 442 (469)
T 3eyp_A 397 SVEYTVDGK--------------NWITIPEA-------------------TDKQAIGHKWIVRLA-PVKAKQVRLRIQDG 442 (469)
T ss_dssp EEEEESSSS--------------CCEECGGG-------------------SSBCCCTTCEEEEEE-EEEEEEEEEEEEEE
T ss_pred EEEEEcCCC--------------ceEEEEec-------------------ccccCCCceeEEecC-CeeEEEEEEEEEcC
Confidence 988877632 12222110 000022334445554 79999999999976
Q ss_pred ccceEeeEEEeecccchhh
Q psy11954 177 EGSLSLCEVEIFTTDGELE 195 (881)
Q Consensus 177 ~~~l~l~EveV~g~~~~l~ 195 (881)
....+|+||+||......+
T Consensus 443 ~g~p~Ise~~Vy~a~~~~~ 461 (469)
T 3eyp_A 443 KACPAIHTFGVYKQSPVFK 461 (469)
T ss_dssp SSSCEEEEEEEECCCTTC-
T ss_pred CCCeEEEEEEEEcCCcccc
Confidence 6678999999998764443
No 88
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B) receptor, CIS-trans isomerization, CCP module, sushi domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB: 1ss2_A
Probab=99.26 E-value=3.1e-12 Score=105.14 Aligned_cols=64 Identities=33% Similarity=0.647 Sum_probs=55.0
Q ss_pred CeeecccCC-CCCCCCCceEEecC--CCeecCcEEEEEcCCCceecCCceeeeccCCcccCCCCceeec
Q psy11954 658 PECIYVDCG-NPETVPNGGFTLTS--NATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGN 723 (881)
Q Consensus 658 P~C~~v~C~-~p~~~~nG~~~~~~--~~~~~g~~v~y~C~~Gy~L~G~~~~~C~~~G~Ws~~~P~C~~~ 723 (881)
|+|. +.|+ +|+.+.||.+.... ..|.+|++|+|+|++||.|+|+..++|+ +|+|++++|+|+.+
T Consensus 2 ~~C~-~~Cp~~~~~~~nG~~~~~~~~~~y~~g~~v~f~C~~Gy~L~G~~~~~C~-~g~Ws~~~P~C~~i 68 (68)
T 1srz_A 2 AEFV-RICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCS-QGQWSTPKPHCQVN 68 (68)
T ss_dssp CCSS-SSCCGGGGEETTEEEECCCCSCSTTTTCEEEEEECTTEEECSCCEEEEE-TTEESSCCCCEEEC
T ss_pred Ccce-eECCCCCCCCCCCEEEecCCCCceeCCCEEEEECCCCCEEeCCCcCEEC-CCEEeCCCCEeeEC
Confidence 6786 5894 56789999998642 3467899999999999999999999999 99999999999864
No 89
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens}
Probab=99.24 E-value=1.3e-11 Score=106.49 Aligned_cols=65 Identities=29% Similarity=0.765 Sum_probs=57.1
Q ss_pred eeecccCCCCCCCCCceEEec--CCCeecCcEEEEEcCCC-ceecCC-ceeeeccCCccc-----CCCCceeec
Q psy11954 659 ECIYVDCGNPETVPNGGFTLT--SNATYYGTAVLYECDEN-YRLEGH-ARRLCLENGTWS-----SGLPTCKGN 723 (881)
Q Consensus 659 ~C~~v~C~~p~~~~nG~~~~~--~~~~~~g~~v~y~C~~G-y~L~G~-~~~~C~~~G~Ws-----~~~P~C~~~ 723 (881)
.|+++.|+.|+.+.||.+... ...|.||++|+|+|++| |.|.|. .+++|+++|+|+ ..+|+|+++
T Consensus 2 ~C~~v~C~~P~~~~nG~~~~~~~~~~~~~gs~v~y~C~~g~y~l~g~~~~~~C~~~G~Ws~~~~~~~~P~C~~v 75 (86)
T 3tvj_A 2 SMTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEPV 75 (86)
T ss_dssp --CCCBCCSCCCCTTEEEEESSSTTCCBTTCEEEEEECTTTEEECSSCCEEEECTTSSEEETTSCCSCCCEEEC
T ss_pred eeeeeeCCCCCCCCCeEEEeccCCCcccCCCEEEEEcCCCceeccCCCCEEEECCCCCCCcCCCCCCCCeeECc
Confidence 589999999999999999853 34578999999999995 899999 999999999999 689999998
No 90
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=99.12 E-value=1.5e-10 Score=113.01 Aligned_cols=98 Identities=27% Similarity=0.595 Sum_probs=71.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCC-CCC--CCCCCCCCCCCCCCCCCeEEEeCC---CCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGE-VVT--KPSWGKDQPNNYNGEQNCVVLDGG---RGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~-~~~--~~~W~~~ep~~~~~~~~Cv~i~~~---~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. ++.|+|+||+ +++ |.+|+++||++..+.++||.|... ..++|+|..|.. .+.|||+..
T Consensus 46 ~~~~WIGl~~~----~~~~~W~dg~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~-~~~fICe~~ 120 (162)
T 1g1s_A 46 SSYYWIGIRKN----NKTWTWVGTKKALTNEAENWADNEPNNKRNNEDCVEIYIKSPSAPGKWNDEHCLK-KKHALCYTA 120 (162)
T ss_dssp TTCEEEEEEEE----TTEEEETTTCCBCCTTTCCBCTTCCCCTTSCCCEEEECTTCSSSTTCEEEECTTS-CEEEEEEEC
T ss_pred CCCEEEeEECC----CCCeEECCCCccCCcccCccCCCCCCCCCCCcceEEEeccCCCCCCeEECCCCCC-CCCEEEEeC
Confidence 46799999983 6899999996 665 899999999987778999999753 456899999986 678999973
Q ss_pred CCCCCCCCCcceeeEeecccccCCCeEEEECCCCce
Q psy11954 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNM 312 (881)
Q Consensus 277 ~~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~ 312 (881)
.|...+-..+|.-... .+ ..+-.|.+||.
T Consensus 121 --~c~~~~C~~~g~C~~~----~~-~~~c~C~~g~~ 149 (162)
T 1g1s_A 121 --SCQDMSCSKQGECLET----IG-NYTCSCYPGFY 149 (162)
T ss_dssp --CCCTTGGGGSEEEEEC----SS-SEEEEECTTEE
T ss_pred --CCcCCCCCCCCEEecC----CC-CceEeCCCCCc
Confidence 5765443333443332 11 23456777775
No 91
>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A {Clupea harengus}
Probab=99.11 E-value=3.7e-11 Score=113.59 Aligned_cols=70 Identities=26% Similarity=0.615 Sum_probs=60.5
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNP 277 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~ 277 (881)
..|||||++. ..++.|+|+||++++|.+|+++||++..+ ++||.|.....++|+|..|+. .+.|||+...
T Consensus 60 ~~~WIGl~~~--~~~~~w~W~dG~~~~y~~W~~geP~~~~~-~~Cv~~~~~~~~~W~d~~C~~-~~~fIC~~~~ 129 (136)
T 2py2_A 60 IPSWIGGTDC--QVSTRWFWMDSTSMDYADWCAAQPDTTLT-ECCIQMNVGIGKCWNDTPCTH-LHSSICAKPL 129 (136)
T ss_dssp CCEEEEEECC--SSTTCCEETTCCCCCCCCBCTTCCCCCGG-GCEEEEEETTTTEEEEECTTS-CEEEEEEEEC
T ss_pred CCEeEeeEcC--CCCCceEeCCCCCcccCCCCCCCCCCCCC-CCCeEEccCCCCeEcCCCCCC-CccEEeeECc
Confidence 6799999984 35789999999999999999999998655 999999765567899999987 7899998743
No 92
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil granule protein, EMBP; 1.8A {Homo sapiens} SCOP: d.169.1.1 PDB: 2brs_A*
Probab=99.10 E-value=7.4e-11 Score=108.28 Aligned_cols=69 Identities=29% Similarity=0.552 Sum_probs=57.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++.....++.|+|+||++++|.+|+++||++ .+++||.|.... ++|+|..|.. .+.|||+.
T Consensus 49 ~~~~WIGl~~~~~~~~~~~~W~dg~~~~y~~W~~~~P~~--~~~~C~~~~~~~-g~W~~~~C~~-~~~fiCe~ 117 (117)
T 1h8u_A 49 QGQVWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWS--RGGHCVALCTRG-GYWRRAHCLR-RLPFICSY 117 (117)
T ss_dssp SSEEEEEEEEECSSSCCEEEETTCCCCCCCCBCSSSCCT--TSCSEEEEETTT-TCEEEECTTS-CEEEEEEC
T ss_pred CCCEEEcccccCCCCCCccEeCCCCcCCccCcCCCCCCC--CCCCCeEEECCC-CcCCCCCCCC-CcceeEeC
Confidence 457999998732235789999999999999999999998 468999998653 4799999986 67899973
No 93
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Probab=99.09 E-value=8.1e-11 Score=107.72 Aligned_cols=67 Identities=27% Similarity=0.664 Sum_probs=58.4
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..+||||++. ..++.|.|+||++++|.+|+++||++..+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 47 ~~~WiGl~~~--~~~~~w~W~dg~~~~~~~W~~~~P~~~~~~~~C~~~~~--~g~W~~~~C~~-~~~fiCe~ 113 (115)
T 2msb_A 47 TSAFLGITDE--VTEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTIVD--NGLWNDISCQA-SHTAVCEF 113 (115)
T ss_dssp SCEEEEEECS--SSTTCCEETTSSBCCSCCBCTTCCCCCTTCCCEEEECT--TSCEEEECTTS-CEEEEEEE
T ss_pred CCEEEeeEcC--CCCCcEEECCCCEeeecCcCCCCCCCCCCCCCeEEECC--CCCEECcCCCC-CeEEEEeE
Confidence 6799999974 46889999999999999999999998767899999973 35899999986 67899986
No 94
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin, calcium-binding protein; HET: MMA; 1.70A {Rattus rattus} SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1* 1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1* 1kze_1*
Probab=99.07 E-value=1.3e-10 Score=106.08 Aligned_cols=68 Identities=28% Similarity=0.558 Sum_probs=59.0
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|.|+||++++|.+|+++||++..+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 44 ~~~~WIGl~~~--~~~~~~~W~dg~~~~y~~W~~~~P~~~~~~~~Cv~~~~--~g~w~~~~C~~-~~~~ICe~ 111 (113)
T 1rdl_1 44 KDVAFLGITDQ--RTENVFEDLTGNRVRYTNWNEGEPNNVGSGENCVVLLT--NGKWNDVPCSD-SFLVVCEF 111 (113)
T ss_dssp SSCEEEEEECS--SSTTCCEETTSCBCCCCCBCTTCCCCCTTCCCEEEECT--TSCEEEECTTS-CBEEEEEE
T ss_pred cCCEEEEeECC--CCCCcEEECCCCEeecCCCCCCcCCCCCCCCCeeEECC--CCcEeccCCCC-CceEEEee
Confidence 46799999984 35789999999999999999999998767899999974 35799999986 77899986
No 95
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=99.07 E-value=3.8e-10 Score=125.21 Aligned_cols=148 Identities=16% Similarity=0.304 Sum_probs=88.7
Q ss_pred CCcEEEEEeCCCcEEeCcceEEecCCCcccCCCCcccccccCCCCCcCCCeEEcCCCCCCCeEEEEcC-----CCceeeC
Q psy11954 387 HGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRTGSVATYSCE-----PGFILFG 461 (881)
Q Consensus 387 ~g~~~~~~C~~Gy~l~G~~~~~C~~~G~Ws~~~P~C~~~~C~~p~~~~ng~~~~~~~~~gs~~~y~C~-----~Gy~l~g 461 (881)
.|..+.+...+-|.+.+.....|..|..+...-+......|+...+. .+.... ..-.+.|..+ .||.+.-
T Consensus 201 ~g~~i~l~f~~~~~~e~~~~~~C~~D~l~i~dg~~~~~~~cG~~~p~---~~~s~~--n~~~i~F~SD~~~~~~GF~~~y 275 (361)
T 4aqb_A 201 EGFMVNLQFEDIFDIEDHPEVPCPYDYIKIKVGPKVLGPFCGEKAPE---PISTQS--HSVLILFHSDNSGENRGWRLSY 275 (361)
T ss_dssp TTCEEEEEECSCCBBCCCSSSSSSSSEEEEEETTEEEEEECBSSCCC---CEECSC--SEEEEEEECCSCCCCCBCEEEE
T ss_pred cCcEEEEEEeecccccCCccCccCCCeEEEeeCCeeEEeeCCCCCCC---CEeecC--CeEEEEEEeCCCCCccceEEEE
Confidence 35556666665555555445556654332211233333456432110 111111 0112445554 3555554
Q ss_pred ceeeecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCC------ceeeccCCcccCCcccccccccccceecc
Q psy11954 462 SNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHP------RRSCLESKVWSDTAPKCEGKATKDIKVCS 535 (881)
Q Consensus 462 ~~~~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~------~~tC~~~G~Ws~~~P~C~~~~~~~~~~~~ 535 (881)
......|..++.+.||.+......+.+|++|+|+|++||+|.|.. .++|+.+|+|+.+.|.|+
T Consensus 276 ~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~----------- 344 (361)
T 4aqb_A 276 RAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCK----------- 344 (361)
T ss_dssp EEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEE-----------
T ss_pred EEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeee-----------
Confidence 444678999999999999987778899999999999999999876 478999999999999999
Q ss_pred ccccccccccCCCCCCCCCeeE
Q psy11954 536 NVAVDRREIRCPEPTLPAHSIL 557 (881)
Q Consensus 536 ~~~~~~~~i~C~~p~~~~ng~~ 557 (881)
++.|+.|..+.||.+
T Consensus 345 -------~~~Cg~p~~~~ng~v 359 (361)
T 4aqb_A 345 -------KNEIDLESELKSEQV 359 (361)
T ss_dssp -------ECC------------
T ss_pred -------EEeCCCCCCCCCCcc
Confidence 899999999999875
No 96
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A {Brachyopsis rostratus}
Probab=99.06 E-value=1.3e-10 Score=109.46 Aligned_cols=69 Identities=28% Similarity=0.643 Sum_probs=59.6
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..+||||++. ..++.|+|+||++++|.+|+++||++..+ ++||.|....+.+|+|..|.. .+.|||+..
T Consensus 63 ~~~WIGl~~~--~~~~~w~W~dG~~~~y~~W~~g~P~~~~~-~~Cv~~~~~~~~~W~d~~C~~-~~~fICe~~ 131 (133)
T 2zib_A 63 GIVWIGGSAC--KVAGAWSWTDGTPVDYRTWCPTKPNDILS-DCCMQMTAAVDKCWDDLPCPA-SHASICAKA 131 (133)
T ss_dssp SCEEEEEECC--SSTTCCEETTCCCCCCCCBCTTCCCCCTT-SCEEEECSSTTCCEEEECTTC-CEEEEEEEE
T ss_pred cCEEEccEec--CCCCceEECCCCCcccCCcCCCCCCCCCC-CCceEEecCCCCcEeCCCCCC-CeeEEEeEc
Confidence 6799999984 35789999999999999999999998655 999999876555799999987 688999864
No 97
>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding protein; HET: RAF; 1.65A {Cucumaria echinata} PDB: 3als_A* 3alt_A*
Probab=99.06 E-value=6.6e-11 Score=114.85 Aligned_cols=70 Identities=26% Similarity=0.451 Sum_probs=61.1
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..|||||++. ..++.|+|+||++++|++|+++||++..+.++||.|.....++|+|..|.. .+.|||+..
T Consensus 81 ~~~WIGl~~~--~~~~~w~W~dG~~~~y~~W~~g~P~~~~~~~~Cv~~~~~~~~~W~d~~C~~-~~~fICe~~ 150 (157)
T 3alu_A 81 PQVYIGMKVG--STNSDQTWTDGSSVDYDGWVSGEPNNGPNSRGAIAAGDYSRGFWADVYSNN-NFKYICQLP 150 (157)
T ss_dssp SEEEEEEEEC--SSTTCEEETTCCCCCCCCBCTTCCCSCSSEEEEEECSTTTTTCEEEECTTC-CEEEEEECC
T ss_pred CCEEEeeeeC--CCCCCeEeCCCCCCCccCcCCCCCCCCCCCCCeEEEecCCCCeEcCCCCCC-ccceEeccc
Confidence 6799999984 357899999999999999999999987678999999876557899999996 778999874
No 98
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=99.05 E-value=4e-10 Score=135.18 Aligned_cols=129 Identities=16% Similarity=0.186 Sum_probs=92.9
Q ss_pred CCCceeccCCC---CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEc
Q psy11954 25 RRPTNQSSTIR---GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVG 101 (881)
Q Consensus 25 ~k~a~qSS~~~---~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~ 101 (881)
+-++++||... .+.|.+|+||+.+++|.+..+. +..+.++||+|||++.+.|++|+|..|.+....++..|+|.++
T Consensus 598 ~~t~tAsS~~~~~~~~~a~~aiDGn~~T~W~S~w~~-~~~~~p~wl~VDLg~~~~V~~V~i~~r~~~~~g~v~~y~I~~S 676 (737)
T 2v5d_A 598 TVKITASSEETSGENAPASFASDGDMNTFWHSKWSS-PAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRITGYKVSVS 676 (737)
T ss_dssp CCCCEESCCBCSSSSBCGGGGGSSCSSCCEECCCSS-SCCCCCCEEEEEEEEEEEEEEEEEECCSSCCTTEEEEEEEEEE
T ss_pred ceEEEeeccccCCCCCCHHHccCCCCCCceeccccC-CCCCCCeEEEEECCCcEEEEEEEEEeccCCCCCceEEEEEEEE
Confidence 55678888753 4678999999999999776543 3456789999999999999999999997654457789999998
Q ss_pred cCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC-----
Q psy11954 102 NSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV----- 176 (881)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~----- 176 (881)
++.. .|+++.+. .+. ..+....+.+. ++.+|||||.+...
T Consensus 677 ~DG~--------------~W~~v~~g-----------------t~~---~~~~~~~v~f~-~v~ARYVRi~~~~~~~~~~ 721 (737)
T 2v5d_A 677 LDGE--------------NFTEVKTG-----------------TLE---DNAAIKFIEFD-SVDAKYVRLDVTDSVSDQA 721 (737)
T ss_dssp SSSS--------------CCCCSEEE-----------------ECC---SSSSCEEEEEE-EEEEEEEEEEEEEEECSSS
T ss_pred cCCC--------------ceEEEEee-----------------eec---CCCceEEEEeC-CceEEEEEEEEEeeccccc
Confidence 7632 22222110 111 11223344444 68999999999843
Q ss_pred ---ccceEeeEEEeec
Q psy11954 177 ---EGSLSLCEVEIFT 189 (881)
Q Consensus 177 ---~~~l~l~EveV~g 189 (881)
..+++|+||+|||
T Consensus 722 ~G~~~~~siaE~~VyG 737 (737)
T 2v5d_A 722 NGRGKFATAAEVNVHG 737 (737)
T ss_dssp SCTTTCCEESEEEEEC
T ss_pred cCCCCcEEEEEEEEEC
Confidence 3579999999997
No 99
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=99.05 E-value=1.7e-10 Score=111.90 Aligned_cols=134 Identities=19% Similarity=0.195 Sum_probs=85.4
Q ss_pred CCCceeccCCC-------CCCCCCCc-CCC-CCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCC-CCCCc
Q psy11954 25 RRPTNQSSTIR-------GAPSSNAN-DGE-LTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCG-HQPLQ 94 (881)
Q Consensus 25 ~k~a~qSS~~~-------~~~a~~Av-DG~-~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~-~~~~~ 94 (881)
.+..++||.+. ...|.+|. |++ ..+.|.. .. .+.++|+|||||+.+.|..|.+..|.+-. .+...
T Consensus 14 d~~itASS~~~~~~~~~~~~~p~~arL~~~~~~~~W~~----~~-~~~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~ 88 (158)
T 3bn6_A 14 NKQITASSYYKTWGLSAFSWFPYYARLDNQGKFNAWTA----QT-NSASEWLQIDLGSQKRVTGIITQGARDFGHIQYVA 88 (158)
T ss_dssp GGGEEESCCCBGGGCGGGBCCGGGCBTTCCSSSCSEEC----SS-CCTTCCEEEEEEEEEEEEEEEEECEEETTEEEEEE
T ss_pred hHhEEEecccccccccccccChhheEEcCCCCCCcccC----CC-CCCCCEEEEeCCCceEEEEEEeeCCCCCCCCceEE
Confidence 56788999875 46789998 554 4566643 22 34689999999999999999998774311 13567
Q ss_pred ccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEe
Q psy11954 95 DLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLV 174 (881)
Q Consensus 95 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~ 174 (881)
.|+|.++.+.. .|.++.+.. +. .-..|.+...........+.+++.+|||||...
T Consensus 89 ~y~i~~S~Dg~--------------~W~~~~~~~-------~~----~~~~F~GN~d~~~~~~~~l~~pi~ARyVRi~p~ 143 (158)
T 3bn6_A 89 AYRVAYGDDGV--------------TWTEYKDPG-------AS----ESKIFPGNMDNNSHKKNIFETPFQARFVRIQPV 143 (158)
T ss_dssp EEEEEEESSSS--------------SCEECCCTT-------CS----SCCCEECCSSSSCCEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEEECCCC--------------ceEEEEcCC-------CC----ceeeeeccCCCCeEEEEeCCCCEEEEEEEEEEE
Confidence 88888877632 233332210 00 001222222222333444445799999999998
Q ss_pred cCccceEeeEEEeec
Q psy11954 175 GVEGSLSLCEVEIFT 189 (881)
Q Consensus 175 g~~~~l~l~EveV~g 189 (881)
.-.....| +|||||
T Consensus 144 ~~~~~~~l-R~ElyG 157 (158)
T 3bn6_A 144 AWHNRITL-RVELLG 157 (158)
T ss_dssp EEESSCEE-EEEEEE
T ss_pred EcCCeeEE-EEEEEc
Confidence 75556666 899997
No 100
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Probab=99.04 E-value=2e-10 Score=114.31 Aligned_cols=73 Identities=27% Similarity=0.599 Sum_probs=62.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCC----CCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVT----KPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPA 278 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~----~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~ 278 (881)
...|||||++. ..++.|.|+||+++. |.+|+++||++..+.++||.|.....++|+|..|.. .+.|||+....
T Consensus 102 ~~~~WIGl~~~--~~~~~w~W~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~~~~W~d~~C~~-~~~fICe~~~~ 178 (182)
T 3kqg_A 102 GLIYWIGLTKA--GMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDK-TFLFICKRPYV 178 (182)
T ss_dssp TCCEEEEEEEC--STTCCEEETTCCCCCHHHHTTTBCTTCCCCTTSCCCEEEECSSSSSCEEEECTTS-CBEEEEEEECC
T ss_pred CCcEEEEeEcc--CCCCceEeCCCCccccccccCCCCCCCCCCCCCCCCeeEEecCCCCCEeCcCCCC-CeeEEeccCCC
Confidence 35799999984 357899999999998 899999999987778999999876556899999986 78999998543
No 101
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin, galactose-specific, sugar binding protein; 2.00A {Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB: 1tlg_A*
Probab=99.03 E-value=1.9e-10 Score=107.00 Aligned_cols=69 Identities=29% Similarity=0.564 Sum_probs=59.3
Q ss_pred cceEEEEeeeCCCCcccc--EEEecCCCC-CCC-CCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITART--WKWVDGEVV-TKP-SWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~--w~W~dg~~~-~~~-~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...||||| +. ..++. |+|+||+++ +|. +|+++||++..+.++||.|. ...++|+|..|.. .+.|||+..
T Consensus 50 ~~~~WIGl-~~--~~~~~~~w~W~dg~~~~~~~~~W~~~~P~~~~~~~~Cv~~~-~~~~~W~d~~C~~-~~~fICe~~ 122 (125)
T 1byf_A 50 GHDYWVGA-DN--LQDGAYNFLWNDGVSLPTDSDLWSPNEPSNPQSWQLCVQIW-SKYNLLDDVGCGG-ARRVICEKE 122 (125)
T ss_dssp TCCEEEEE-ES--TTTCTTCCEETTSCBCCTTCTTBCTTCSCSCTTSCCEEEEE-TTTTEEEEECSCS-CEEEEEEEE
T ss_pred CCCEEEec-cc--CCCCceeEEECCCCCCcccccCcCCCcCCCCCCCCCceEEE-CCCCcEECcCCCC-ceeEEEeee
Confidence 46799999 63 45788 999999999 999 99999999877789999999 4456899999987 678999874
No 102
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=99.03 E-value=4.5e-10 Score=133.55 Aligned_cols=126 Identities=14% Similarity=0.109 Sum_probs=88.9
Q ss_pred eccCCC---CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCC
Q psy11954 30 QSSTIR---GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDL 106 (881)
Q Consensus 30 qSS~~~---~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~ 106 (881)
+||... .+.|.+|+||+.++.|.+..+.....+..+||+|||++.+.|++|+|..|.+....++..|+|.++++...
T Consensus 468 ~ss~~~~~~~~~~~~a~DG~~~T~w~s~~~~~~~~~~~~~i~vDLg~~~~i~~v~~~~r~~~~~~~~~~y~i~~S~Dg~~ 547 (601)
T 1w8o_A 468 VDSEETAREDGRASNVIDGNPSTFWHTEWSRADAPGYPHRISLDLGGTHTISGLQYTRRQNSANEQVADYEIYTSLNGTT 547 (601)
T ss_dssp ESCCCCSSSCCCGGGGGSSCTTCCEECCCSSTTCCCSCEEEEEEEEEEEEEEEEEEEECSSCSTTCBCEEEEEEESSSSS
T ss_pred cccccccccCCccceeeCCCCCCcEecCCCCCCCCCCCeEEEEECCCcEEEeEEEEecCCCCCCCceEEEEEEEECCCCc
Confidence 455543 46789999999999997655443333467899999999999999999999775556889999999987331
Q ss_pred CCCCCccCCCCCCCCC-CCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc---cceEe
Q psy11954 107 QKNPLCAWFPGTLGHQ-PLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE---GSLSL 182 (881)
Q Consensus 107 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~---~~l~l 182 (881)
|+ |+. .+.+.. .+....+.+. ++.+|||||.+.... .+++|
T Consensus 548 --------------w~~~v~-----------------~~~~~~---~~~~~~~~f~-~~~aRyvRi~~~~~~~~~~~~~i 592 (601)
T 1w8o_A 548 --------------WDGPVA-----------------SGRFTT---SLAPQRAVFP-ARDARYIRLVALSEQTGHKYAAV 592 (601)
T ss_dssp --------------CEEEEE-----------------EEECCS---CSSCEEEEEE-EEEEEEEEEEECCBTTSCSCCEE
T ss_pred --------------cceeee-----------------eEEEcC---CCceEEEEeC-CcceEEEEEEEEEcCCCCceEEE
Confidence 11 110 011111 1123344444 689999999998543 47999
Q ss_pred eEEEeecc
Q psy11954 183 CEVEIFTT 190 (881)
Q Consensus 183 ~EveV~g~ 190 (881)
+||+|||.
T Consensus 593 ~Ei~v~g~ 600 (601)
T 1w8o_A 593 AELEVEGQ 600 (601)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 99999985
No 103
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=99.03 E-value=5.6e-10 Score=108.22 Aligned_cols=98 Identities=24% Similarity=0.504 Sum_probs=69.6
Q ss_pred cceEEEEeeeCCCCccccEEEecCC-CC--CCCCCCCCCCCCCCCCCCeEEEeCC---CCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGE-VV--TKPSWGKDQPNNYNGEQNCVVLDGG---RGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~-~~--~~~~W~~~ep~~~~~~~~Cv~i~~~---~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. ++.|.|+||+ ++ .|.+|+++||++..+.++||.|... ..++|+|..|.. .+.|||+.
T Consensus 46 ~~~~WIGl~~~----~~~~~W~dg~~~~~~~y~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~-~~~fICe~- 119 (157)
T 1g1t_A 46 PSYYWIGIRKV----NNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSK-KKLALCYT- 119 (157)
T ss_dssp TTCEEESEEEE----TTEEEETTTCCBCCTTTCCBCTTCCCCCSTTCCEEEECTTCSSSTTCEEEECTTS-CBEEEEEE-
T ss_pred CCCEEEEEECC----CCeeEEeCCCccCCcccCCCCCCcCCCCCCCCCceEEeCcCCCCCCccccCCCCC-CcceEeCc-
Confidence 35699999973 6799999987 55 4899999999987778999999642 356899999986 68999997
Q ss_pred CCCCCCCCCcceeeEeecccccCCCeEEEECCCCce
Q psy11954 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNM 312 (881)
Q Consensus 277 ~~~C~~p~~~~ng~~~~~~~~~~gs~v~y~C~~Gy~ 312 (881)
..|...+-..+|.-... - ....=+|.+||+
T Consensus 120 -~~~~~~pc~~~g~C~~~-~----~~~~c~C~~g~~ 149 (157)
T 1g1t_A 120 -AACTNTSCSGHGECVET-I----NNYTCKCDPGFS 149 (157)
T ss_dssp -CCCCTTGGGGSEEEEEE-T----TEEEEEECTTEE
T ss_pred -CCCCCCCCCCCCEeecC-C----CCeeEECCCCcc
Confidence 34654433333443322 0 122335666665
No 104
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=99.02 E-value=5.5e-10 Score=109.18 Aligned_cols=73 Identities=27% Similarity=0.660 Sum_probs=59.4
Q ss_pred cceEEEEeeeCCCCccccEEEecCC-CC--CCCCCCCCCCCCCCCCCCeEEEeCC---CCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGE-VV--TKPSWGKDQPNNYNGEQNCVVLDGG---RGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~-~~--~~~~W~~~ep~~~~~~~~Cv~i~~~---~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. ++.|+|+||+ ++ .|.+|+++||++..+.++||.|... ..++|+|..|.. .+.|||+..
T Consensus 46 ~~~~WIGl~~~----~~~~~W~dg~~~~~~~y~~W~~geP~~~~~~~~Cv~~~~~~~~~~~~W~d~~C~~-~~~fICe~~ 120 (164)
T 3cfw_A 46 RSYYWIGIRKI----GGIWTWVGTNKSLTEEAENWGDGEPNNKKNKEDCVEIYIKRNKDAGKWNDDACHK-LKAALCYTA 120 (164)
T ss_dssp TTCEEESEEEE----TTEEEETTTCCBCCTTTCCBCTTCCCCGGGCCCEEEECTTCSSSTTCEEEECTTS-CEEEEEEEC
T ss_pred CccEEEeEECC----CCEEEECCCCcccccccCCCCCCCCCCCCCCccceeeeccCCCCCCceeCCCCCC-CcEeEEccC
Confidence 46799999973 6899999987 55 4899999999987668999999743 456899999986 778999974
Q ss_pred CCCCCC
Q psy11954 277 PANCGS 282 (881)
Q Consensus 277 ~~~C~~ 282 (881)
.|..
T Consensus 121 --~~~~ 124 (164)
T 3cfw_A 121 --SCQP 124 (164)
T ss_dssp --CCCT
T ss_pred --CCCC
Confidence 3554
No 105
>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: d.169.1.1
Probab=99.02 E-value=2.2e-10 Score=107.16 Aligned_cols=69 Identities=29% Similarity=0.687 Sum_probs=59.6
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCC-CCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNY-NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~-~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..+||||++. ..++.|+|+||++++|.+|+++||++. .+.++||.|.....++|+|..|.. .+.|||+.
T Consensus 60 ~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P~~~~~~~~~C~~~~~~~~~~w~~~~C~~-~~~fICe~ 129 (130)
T 1tdq_B 60 DYQWIGLNDR--TIEGDFRWSDGHSLQFEKWRPNQPDNFFATGEDCVVMIWHERGEWNDVPCNY-QLPFTCKK 129 (130)
T ss_dssp SCEEEEEECS--SSTTCCEETTCCCCCCCCBCTTCCCCCSTTTEEEEEEETTTTTEEEEEETTS-CEEEEEEE
T ss_pred CCEEEeeecC--CCCCEEEecCCCcCCccccCCCCCCCccCCCCCeEEEccCCCCcccCcCCCC-Ceeeeeec
Confidence 5699999984 357899999999999999999999985 467999999865567899999986 67899985
No 106
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein; 2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Probab=99.01 E-value=1.6e-10 Score=110.66 Aligned_cols=72 Identities=32% Similarity=0.766 Sum_probs=59.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNP 277 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~ 277 (881)
...|||||++. ..++.|+|+||++++|.+|+++||++..+.++||.|.....++|+|..|.. .+.|||+...
T Consensus 69 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~W~~g~P~~~~~~~~Cv~~~~~~~~~W~d~~C~~-~~~fICe~~~ 140 (147)
T 1egg_A 69 HKLFWLGLTYG--SPSEGFTWSDGSPVSYENWAYGEPNNYQNVEYCGELKGDPTMSWNDINCEH-LNNWICQIQK 140 (147)
T ss_dssp TCEEEEEEECC------CCCCTTSCCCCCCCCCTTCSCGGGSCCEEEEEECSTTCCEEEEETTS-CBEEEEECCC
T ss_pred CCcEEEeeecC--CCCCcEEecCCCCcccCccCCCCCCCCCCCCCCeEECCCCCCceeccCCCC-CccEEeeCCC
Confidence 46799999984 357899999999999999999999986678999999875346899999987 7889999854
No 107
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A* 1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1* 2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1* 1fif_A 1fih_A*
Probab=99.00 E-value=2.3e-10 Score=109.98 Aligned_cols=67 Identities=27% Similarity=0.664 Sum_probs=58.4
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..|||||++. ..++.|.|+||++++|.+|++++|++..+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 81 ~~~WIGl~~~--~~~~~w~W~dg~~~~~~~W~~g~P~~~~~~~~Cv~~~~--~g~W~d~~C~~-~~~fICe~ 147 (149)
T 1rtm_1 81 TSAFLGITDE--VTEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTIVD--NGLWNDISCQA-SHTAVCEF 147 (149)
T ss_dssp SCEEEEEECS--SSTTCCEETTSSBCCSCCBCTTCCCCCTTCCCEEEECG--GGCEEEECTTS-EEEEEEEE
T ss_pred CCEEEEeecc--CcCCeEEECCCCCccccCcCCCCCCCCCCCCCeEEECC--CCCEeCCCCCC-CeeEEEEe
Confidence 6799999974 46889999999999999999999998767899999973 45899999986 67899986
No 108
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Probab=99.00 E-value=1.9e-10 Score=108.29 Aligned_cols=70 Identities=33% Similarity=0.725 Sum_probs=59.7
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|+|+||++++|.+|+++||++..+.++||.|....+ ++|+|..|.. .+.|||+.
T Consensus 63 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P~~~~~~~~C~~~~~~~~~~~w~~~~C~~-~~~~ICe~ 133 (135)
T 1jzn_A 63 QENVWIGLRDK--KKDFSWEWTDRSCTDYLTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVCES-KDAFLCQC 133 (135)
T ss_dssp SCCEEEEEECT--TSSSCCEETTCCCCCCCCBCTTCCCCGGGCCCEEEECGGGTTCSEEEECTTS-CEEEEEEE
T ss_pred CCCEEEeeEcC--CcCCceEECCCCccCcCcCCcCCCCCCCCCCCceEEECCCCCCcCCCcCCCC-CCceeeee
Confidence 35799999984 35789999999999999999999998666899999976433 5899999997 67899986
No 109
>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor) (FC-epsilon-RII)...; C-type lectin, calcium-bound, lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A 1t8d_A
Probab=99.00 E-value=3e-10 Score=112.33 Aligned_cols=76 Identities=30% Similarity=0.716 Sum_probs=57.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccc-cceeecCCCCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYL-HWICQHNPANCG 281 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~-~~iC~~~~~~C~ 281 (881)
...|||||++. ..++.|+|+||++++|.+|+.+||++..+.++||.|.. .++|+|..|.. .+ .|||+.. ..|.
T Consensus 70 ~~~~WIGl~~~--~~~~~w~W~dG~~~~y~~W~~geP~~~~~~~~Cv~~~~--~g~W~d~~C~~-~~~~fICe~~-~~c~ 143 (175)
T 2h2t_B 70 HTGSWIGLRNL--DLKGEFIWVDGSHVDYSNWAPGEPTSRSQSEDCVMMRG--SGRWNDAFCDR-KLGAWVCDRL-ATCT 143 (175)
T ss_dssp TTCEEEEEEEE--TTTTEEEETTSCCCSSCCBCTTCCCC-----CEEEECT--TSCEEEECTTC-CEEEEEEEEE-CBC-
T ss_pred CCcEEecceec--CCCCCeEeCCCCcccCcCcCCCCCCCCCCCCCceEEcC--CCcEEECCCCC-cCcceEEeEC-CcCC
Confidence 46799999984 35789999999999999999999998767899999974 35799999986 56 8999975 4576
Q ss_pred CCC
Q psy11954 282 SPD 284 (881)
Q Consensus 282 ~p~ 284 (881)
.+.
T Consensus 144 ~~~ 146 (175)
T 2h2t_B 144 PPA 146 (175)
T ss_dssp ---
T ss_pred CCc
Confidence 553
No 110
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Caenorhabditis elegans} SCOP: d.169.1.1
Probab=98.99 E-value=7.2e-10 Score=106.58 Aligned_cols=69 Identities=26% Similarity=0.654 Sum_probs=58.7
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCC-------CCCCCCCCCCCCCCCCCCeEEEeC---CCCcccccccccccccccee
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVV-------TKPSWGKDQPNNYNGEQNCVVLDG---GRGWLWNDVGCKLDYLHWIC 273 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~-------~~~~W~~~ep~~~~~~~~Cv~i~~---~~~~~Wnd~~C~~~~~~~iC 273 (881)
..|||||++ . .++.|.|+||+++ .|.+|+++||++ .+.++||.|.. ...++|+|..|.. .+.|||
T Consensus 53 ~~~WIGl~~-~--~~~~w~W~dg~~~~~~~~~~~y~~W~~geP~~-~~~~~Cv~~~~~~~~~~~~W~d~~C~~-~~~fIC 127 (150)
T 1wk1_A 53 TQFWIGLFK-N--SDGQFYWDRGQGINPDLLNQPITYWANGEPSN-DPTRQCVYFDGRSGDKSKVWTTDTCAT-PRPFIC 127 (150)
T ss_dssp CEEEEEEEE-C--SSSCEEECCSSSSCCEECCCSCCCBCTTCSCC-CSSCCEEEEESSCSCGGGCEEEECTTS-CBCCCE
T ss_pred CCEEEEEEe-C--CCCcEEeCCCCccccccccCCcCCCCCCCCCC-CCCCCcEEEeCccCCCCCEEeCcCcCC-CeeEEE
Confidence 469999998 3 4789999999998 899999999998 56799999983 3456899999996 789999
Q ss_pred ecCC
Q psy11954 274 QHNP 277 (881)
Q Consensus 274 ~~~~ 277 (881)
+...
T Consensus 128 e~~~ 131 (150)
T 1wk1_A 128 QKHR 131 (150)
T ss_dssp ECCC
T ss_pred eecC
Confidence 9754
No 111
>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type lectin, N-acetylgalactosamine, invertebrate, sugar binding protein; HET: NGA A2G; 1.70A {Cucumaria echinata} SCOP: d.169.1.1 PDB: 1wmy_A*
Probab=98.99 E-value=2.5e-10 Score=108.37 Aligned_cols=70 Identities=24% Similarity=0.558 Sum_probs=60.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|+|+||++++|.+|+++||++..+.++||.|....+++|+|..|.. .+.|||+.
T Consensus 68 ~~~~WiGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P~~~~~~~~Cv~~~~~~~~~W~~~~C~~-~~~fICe~ 137 (140)
T 1wmz_A 68 AGQLWIGLYDK--YNEGDFIWTDGSKVGYTKWAGGQPDNWNNAEDYGQFRHTEGGAWNDNSAAA-QAKYMCKL 137 (140)
T ss_dssp SCCEEEEEECS--SSTTCCEETTCCCCCCCCBCTTCCCCGGGCEEEEEECSSTTTCEEEEETTC-CEEEEEEE
T ss_pred CCCEEEeeeec--CCCCeeEECCcCcccccCcCcccCCCCCCcCCcEEEccCCCCCEeCCCCCC-CceEEEEE
Confidence 46799999984 358899999999999999999999986668999999876555899999987 67899986
No 112
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET: GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Probab=98.98 E-value=3e-10 Score=107.78 Aligned_cols=74 Identities=28% Similarity=0.639 Sum_probs=60.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCC----CCCCCeEEEeCCCCccccccccccccccceeecCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNY----NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPA 278 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~----~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~ 278 (881)
...|||||++. ..++.|+|+||++++|.+|+++||++. ...++||.|.. .++|+|..|.. .+.|||+....
T Consensus 59 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P~~~~~~~~~~~~Cv~~~~--~g~W~d~~C~~-~~~fICe~~~~ 133 (140)
T 2ox9_A 59 RESHWIGLTDS--EQESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLIY--AGQWNDFQCDE-INNFICEKERE 133 (140)
T ss_dssp SSCEEEEEECS--SSTTCCEETTSCBCCSCCBCTTCCCCTTTTTSSCCCEEEECG--GGCEEEECTTS-CBEEEEEEECC
T ss_pred CCCEEeeeEeC--CCCCceEeCCcCcCCccCcCCcCCCCcccCCCCCCCCceECC--CCeEeccCCCC-CceeEEeecCC
Confidence 56799999984 357899999999999999999999985 46799999964 35799999986 78899998655
Q ss_pred CCC
Q psy11954 279 NCG 281 (881)
Q Consensus 279 ~C~ 281 (881)
.+.
T Consensus 134 ~~~ 136 (140)
T 2ox9_A 134 AVP 136 (140)
T ss_dssp ---
T ss_pred CCc
Confidence 444
No 113
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense, metalloprotein, sugar binding protein; 1.90A {Rattus norvegicus} SCOP: d.169.1.1 h.1.1.1
Probab=98.98 E-value=2.6e-10 Score=111.93 Aligned_cols=67 Identities=27% Similarity=0.664 Sum_probs=58.6
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..|||||++. ..++.|.|+||++++|.+|+++||++..+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 100 ~~~WIGl~d~--~~~g~w~W~dG~~~~y~~W~~geP~~~~~~e~Cv~~~~--~g~W~d~~C~~-~~~~ICe~ 166 (168)
T 1buu_A 100 TSAFLGITDE--VTEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTIVD--NGLWNDISCQA-SHTAVCEF 166 (168)
T ss_dssp SCEECSEECS--SSTTCCEETTSSBCSCCCBSSSSCCCTTSCCCEEEECT--TSCEEEECTTS-CEEEEEEE
T ss_pred CCEEeeeecC--CcCCCEEeCCCCCcCCCCCCCCCCCCCCCCCCeEEECC--CCCEEccCCCC-CEEEEEEe
Confidence 6799999984 46889999999999999999999998767899999973 45899999986 67899986
No 114
>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin; 2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=98.98 E-value=2.9e-10 Score=108.17 Aligned_cols=67 Identities=25% Similarity=0.531 Sum_probs=58.1
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..+||||++. ..++.|.|+||++++|.+|+++||++..+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 73 ~~~WIGl~~~--~~~~~w~W~dG~~~~~~~W~~g~P~~~~~~~~Cv~~~~--~g~W~~~~C~~-~~~fICe~ 139 (141)
T 1hup_A 73 EEAFLGITDE--KTEGQFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLLK--NGQWNDVPCST-SHLAVCEF 139 (141)
T ss_dssp SCEEEEEECS--SSTTCCEETTSCBCSCCCBCTTCCCCGGGCCCEEEECT--TSCEEEECTTS-EEEEEEEE
T ss_pred CCEEEeeeec--CcCCcEEECCcCCCcCCCCCCCCCCCCCCCCCeEEECC--CCcEeccCCCC-CccEEEEE
Confidence 6799999984 35789999999999999999999998667899999973 35899999986 67899985
No 115
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin, carbohydrate recognition domain; 2.00A {Homo sapiens} SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Probab=98.96 E-value=3.6e-10 Score=106.65 Aligned_cols=70 Identities=29% Similarity=0.641 Sum_probs=59.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCC---CCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWG---KDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~---~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. ..++.|.|+||++++|.+|+ ++||++ .+.++||.|.....++|+|..|.. .+.|||+..
T Consensus 63 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~W~~~~~g~P~~-~~~~~Cv~~~~~~~~~W~d~~C~~-~~~fiCe~~ 135 (137)
T 1tn3_A 63 EAEIWLGLNDM--AAEGTWVDMTGARIAYKNWETEITAQPDG-GKTENCAVLSGAANGKWFDKRCRD-QLPYICQFG 135 (137)
T ss_dssp TCEEEEEEEEE--EETTEEEETTSCBCSCCCBCCTTTCSSCC-GGGCCEEEEETTTTTEEEEECTTS-CEEEEEEEE
T ss_pred CCCEEEeeEcc--CCCceEEeCCcCCCcccccCcCCCCcCCC-CCccCCcEEccCCCCeEeCcCCCC-CccceEeEe
Confidence 46799999983 35789999999999999999 999997 346899999865567899999986 778999863
No 116
>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein; HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1lit_A
Probab=98.95 E-value=5e-10 Score=106.71 Aligned_cols=69 Identities=32% Similarity=0.800 Sum_probs=58.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|.|+||++++|.+|+++||++. +.++||.|....+ ++|+|..|.. .+.|||+.
T Consensus 73 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P~~~-~~~~Cv~~~~~~~~~~W~d~~C~~-~~~fICe~ 142 (144)
T 1qdd_A 73 DFNVWIGLHDP--KKNRAWHWSSGSLVSYKSWGIGAPSSV-NPGYCVSLTSSTGFQKWKDVPCED-KFSFVCKF 142 (144)
T ss_dssp CSEEEEEEECT--TSSSCCEETTCCCCCCCCBCTTCSCSS-SCCSEEEEEGGGTTCSEEEECTTS-CEEEEEEE
T ss_pred CCCEEEeeEcC--CCCCeEEeCCCCCcCcCccCCCCcCCC-CCCCcEEEEecCCCCeEeCCCCCC-Cceeeeee
Confidence 46799999984 357899999999999999999999975 5799999976433 5799999986 77899986
No 117
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=98.95 E-value=6.1e-10 Score=125.62 Aligned_cols=126 Identities=15% Similarity=0.114 Sum_probs=94.9
Q ss_pred ccccccCC-CCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCccc
Q psy11954 18 SGTNVALR-RPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDL 96 (881)
Q Consensus 18 ~~~nlA~~-k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~ 96 (881)
.+.|||.+ +++++||.. +.|.+|+||+..|.|... ..+..+|++|||+++.+|+.|+|.-.-. ..+|+..|
T Consensus 350 ~g~nla~~~~~vtaSs~~--~~~~~a~Dgn~~TyW~a~-----~~~~~~~l~idLg~~~~~n~v~IqE~i~-~gqRV~~y 421 (478)
T 3ues_A 350 FREALASVRCEARTSSAS--AAAAHLVDGNRDTFWRPD-----ADDAAPAITLTLPQPTTINAIVIEEAIE-HGQRIEHL 421 (478)
T ss_dssp HHHHHHTCCCEEEESSCG--GGGGGGSSSCTTCCBCCC-----TTCSSCEEEEEEEEEEEEEEEEEEECGG-GCCCEEEE
T ss_pred ccccccccccceEeeccc--cChhhcccCCCCceEeCC-----CCCCCeeEEEECCCCcEEEEEEEeeccc-CCCceEEE
Confidence 46899999 999999987 789999999999999754 3446799999999999999999985532 12688888
Q ss_pred EEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC
Q psy11954 97 EIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV 176 (881)
Q Consensus 97 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~ 176 (881)
+|.+.++.. .|+.| +.-. + .|....+.++ ++++|||||.+...
T Consensus 422 ~Ve~~~dgg--------------~W~~v-------------------a~gt-t--iG~kri~~f~-~v~ar~VRl~I~~s 464 (478)
T 3ues_A 422 RVTGALPDG--------------TERVL-------------------GQAG-T--VGYRRILRFD-DVEVSSVTLHVDGS 464 (478)
T ss_dssp EEEEECTTS--------------CEEEE-------------------EEES-C--CTTCEEEEEE-EEEEEEEEEEEEEE
T ss_pred EEEEEeCCC--------------CEEEE-------------------Eecc-c--cCceEEEEeC-CeeeEEEEEEEecc
Confidence 888876511 11211 1111 1 2334444554 79999999999977
Q ss_pred ccceEeeEEEee
Q psy11954 177 EGSLSLCEVEIF 188 (881)
Q Consensus 177 ~~~l~l~EveV~ 188 (881)
.....|+||+||
T Consensus 465 ~~~p~Ise~~vY 476 (478)
T 3ues_A 465 RLAPMISRAAAV 476 (478)
T ss_dssp SSSCCEEEEEEE
T ss_pred CCCeEEEEEEEE
Confidence 667899999999
No 118
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.95 E-value=1.3e-09 Score=130.97 Aligned_cols=137 Identities=12% Similarity=0.106 Sum_probs=96.3
Q ss_pred cccCC-CCceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCC-CCCCcccEE
Q psy11954 21 NVALR-RPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCG-HQPLQDLEI 98 (881)
Q Consensus 21 nlA~~-k~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~-~~~~~~~~i 98 (881)
+|+.. -++++||....+.|.+|+||+.+++|.+....++..+..+||+|||++.+.|++|+|..|.+.. ..+...++|
T Consensus 25 ~i~~~~~~~~ass~~~~~~~~~~~Dg~~~T~W~s~~~~~~~~~~~~~l~vDLg~~~~i~~v~~~~~~~~~~~~~~~~y~i 104 (656)
T 1k3i_A 25 AISRNNWAVTCDSAQSGNECNKAIDGNKDTFWHTFYGANGDPKPPHTYTIDMKTTQNVNGLSMLPRQDGNQNGWIGRHEV 104 (656)
T ss_dssp ECCCTTCEEEESCCCTTSCGGGGSSSCTTCCEECCCGGGCCCCSCEEEEEEEEEEEEEEEEEEECCCSSCCTTCBCEEEE
T ss_pred ccCccCeEEEEeccCCCCcHHhcCCCCCCCEEEeCCCCCCCCCCCceEEecCCCcEEEEEEEEEecccCCCCCCeeEEEE
Confidence 45443 3677777666678999999999999976544333355788999999999999999999997542 357889999
Q ss_pred EEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc-
Q psy11954 99 RVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE- 177 (881)
Q Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~- 177 (881)
.++++...+ . +.+.. +.+. ..+....+.+. ++++|||||.+....
T Consensus 105 ~~S~Dg~~w-----~--------~~v~~-----------------~~~~---~~~~~~~~~~~-~~~aRyvRi~~~~~~~ 150 (656)
T 1k3i_A 105 YLSSDGTNW-----G--------SPVAS-----------------GSWF---ADSTTKYSNFE-TRPARYVRLVAITEAN 150 (656)
T ss_dssp EEESSSSCC-----C--------SCSEE-----------------EECC---SSSSCEEEEEE-EEEEEEEEEEECSBTT
T ss_pred EEECCCCCc-----c--------eeeee-----------------eeec---CCCcceeeecC-CcceEEEEEEEecccc
Confidence 998773311 0 11100 0111 12333445554 789999999998643
Q ss_pred --cceEeeEEEeeccc
Q psy11954 178 --GSLSLCEVEIFTTD 191 (881)
Q Consensus 178 --~~l~l~EveV~g~~ 191 (881)
.+++|+|++||+..
T Consensus 151 ~~~~~si~E~~v~~~~ 166 (656)
T 1k3i_A 151 GQPWTSIAEINVFQAS 166 (656)
T ss_dssp SCSCCEESEEEEEECS
T ss_pred cCCceeEEEEEEeecc
Confidence 36999999999886
No 119
>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A* 3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A* 3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*
Probab=98.94 E-value=3.5e-10 Score=109.57 Aligned_cols=74 Identities=28% Similarity=0.603 Sum_probs=61.8
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCC----CCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTK----PSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPA 278 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~----~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~ 278 (881)
...|||||++. ..++.|+|+||+++.+ .+|+++||++..+.++||.|.....++|+|..|.. .+.|||+....
T Consensus 76 ~~~~WIGl~~~--~~~~~w~W~dG~~~~~~~~~~~W~~geP~~~~~~~~Cv~~~~~~~~~W~d~~C~~-~~~fICe~~~~ 152 (156)
T 3c22_A 76 GLIYWIGLTKA--GMEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWNDAPCDK-TFLFICKRPYV 152 (156)
T ss_dssp TCCEEEEEEEE--TTTTEEEETTCCCCCHHHHGGGBCTTCCCCGGGCCCEEEECSSSSSCEEEECTTS-CBEEEEEEECC
T ss_pred CCcEEEeeecc--CCCCceEeCCCCccccccccCcCCCCCCCCCCCCCCceEECCCCCCcEECCCCCC-CeeEEEeeCCc
Confidence 46799999984 3578999999999985 79999999986568999999875557899999987 67899998554
Q ss_pred C
Q psy11954 279 N 279 (881)
Q Consensus 279 ~ 279 (881)
.
T Consensus 153 ~ 153 (156)
T 3c22_A 153 P 153 (156)
T ss_dssp C
T ss_pred C
Confidence 3
No 120
>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell structural protein, phosphoprotein, sugar-binding protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus} SCOP: d.169.1.1
Probab=98.93 E-value=3.9e-10 Score=107.15 Aligned_cols=68 Identities=24% Similarity=0.594 Sum_probs=58.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|+|+||++++|.+|++++|++. .++||.|....+ ++|+|..|.. .+.|||+.
T Consensus 72 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~W~~~~P~~~--~~~C~~~~~~~~~~~w~~~~C~~-~~~fICe~ 140 (142)
T 1gz2_A 72 DGRVWIGLHRP--AGSRSWRWSDGTAPRFASWHRTAKARR--GGRCAALRDEEAFTSWAARPCTE-RNAFVCKA 140 (142)
T ss_dssp SSCEEEEEECC--TTCSSCEETTSCCCCCCCBCSSSGGGC--SCSEEEECTTTTSSCEEEECTTC-CEEEEEEE
T ss_pred CCCEEEEeecC--CCCCCcEeCCCCccCccCcCCCCCCCC--CCCCeEEecCCCCCeEecCCCCC-CceeEEee
Confidence 56799999984 357899999999999999999999875 789999976543 3799999987 67899986
No 121
>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled coil, C-type lectin, carbohydrate recognition domain; 2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Probab=98.92 E-value=6.6e-10 Score=110.59 Aligned_cols=69 Identities=29% Similarity=0.648 Sum_probs=59.6
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCC---CCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWG---KDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~---~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|.|+||++++|.+|+ ++||++ .+.++||.|.....++|+|..|.. .+.|||+.
T Consensus 108 ~~~~WIGl~~~--~~~g~w~W~dG~~~~y~nW~~~~~geP~~-~~~~~Cv~l~~~~~g~W~d~~C~~-~~~fICe~ 179 (182)
T 1htn_A 108 EAEIWLGLNDM--AAEGTWVDMTGARIAYKNWETEITAQPDG-GKTENCAVLSGAANGKWFDKRCRD-QLPYICQF 179 (182)
T ss_dssp SCEEEEEEECS--SSTTCCBCTTSCBCCCCCBCCSSSCSCCC-TTTCCEEEEETTTTTEEEEECTTS-CEEEEEEE
T ss_pred CCcEEEeeECC--CCCCeEEeCCCCCccCCCCCCCCCCcCCC-CCCCCCEEEccCCCCCEECCCCCC-CeeEEEEE
Confidence 46799999984 45889999999999999999 999997 457999999865567899999986 67899986
No 122
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate binding, lectin, mannose, sugar BIND protein; 1.80A {Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A 3pak_A
Probab=98.92 E-value=1.1e-09 Score=105.03 Aligned_cols=66 Identities=29% Similarity=0.645 Sum_probs=57.0
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..|||||++. ..++.|.|+||++++|.+|++++|++. +.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 83 ~~~WIGl~~~--~~~~~w~W~dg~~~~~~~W~~~~P~~~-~~~~Cv~~~~--~g~W~~~~C~~-~~~fICe~ 148 (148)
T 3pbf_A 83 NYVYLGMIED--QTPGDFHYLDGASVSYTNWYPGEPRGQ-GKEKCVEMYT--DGTWNDRGCLQ-YRLAVCEF 148 (148)
T ss_dssp SCEEEEEEEC--SSTTCEEETTSCBCCSCCBCTTCCCST-TSCCEEEECT--TSCEEEECSCS-CEEEEEEC
T ss_pred CCEEEEeEec--CCCCceEeCCCCCcccCCcCCCccCcC-CCCCceEECC--CCcEecCCCCC-CeeEeeeC
Confidence 4799999984 357899999999999999999999986 6789999976 34799999986 67899973
No 123
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting, mannan-binding protein, complement, ficolins complement pathway, mannose- binding lectin; HET: NAG BMA MAN; 4.20A {Homo sapiens}
Probab=98.92 E-value=7.3e-09 Score=114.84 Aligned_cols=73 Identities=18% Similarity=0.346 Sum_probs=58.4
Q ss_pred ccccccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEcCCC------eeEeCCCCeecCCCCceeccCCCCCCCC
Q psy11954 800 TCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPY------LRKCMEDGSWSGDEPRCEKRFNSGIPGR 872 (881)
Q Consensus 800 ~C~~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~G~~------~~~C~~~G~Ws~~~P~C~~~~~~~~~~~ 872 (881)
+|....|+.|+.+.||.+......+.+|++|+|+|++||+|.|.. +++|+.||+|+.++|+|+.+.|+.++++
T Consensus 276 ~~~~~~C~~~~~p~~G~~~~~~~~~~~g~~v~~~C~~GY~l~g~~~~~~~~~~~C~~~g~Ws~~~P~C~~~~Cg~p~~~ 354 (361)
T 4aqb_A 276 RAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKKNEIDLESEL 354 (361)
T ss_dssp EEECCEECCCCCCTTEEEESCCSSEETTCEEEEEECTTEEEEETTEEESEEEEEBCTTSCBSSCCCEEEECC-------
T ss_pred EEccCCCCCCCCCCCCEEecCCCCcccCCEEEEEeCCCeEEeCCCcccccCeeEECCCCeeCCCCCeeeEEeCCCCCCC
Confidence 345567999999999998866666889999999999999999876 4799999999999999999999877654
No 124
>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV, disulfide bond, glycoPro lectin, secreted, sugar binding protein; NMR {Homo sapiens}
Probab=98.91 E-value=4.8e-10 Score=104.96 Aligned_cols=68 Identities=22% Similarity=0.732 Sum_probs=57.2
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCc-cccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW-LWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~-~Wnd~~C~~~~~~~iC~~~ 276 (881)
...+||||++. ..++.|+|+||++++|.+|+.+|| .+.++||.|....+. +|+|..|.. .+.|||+..
T Consensus 62 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P---~~~~~C~~~~~~~~~~~W~~~~C~~-~~~~iCe~~ 130 (131)
T 2kv3_A 62 SQSIWIGLHDP--QKRQQWQWIDGAMYLYRSWSGKSM---GGNKHCAEMSSNNNFLTWSSNECNK-RQHFLCKYR 130 (131)
T ss_dssp CCCCBCSEECS--SSSSCCEETTCCCCSSCCCSSCCC---TTCTTEEEECTTCTTCCEEEECTTC-CEEEEEEEC
T ss_pred CCCEEEeccCC--CCCCCeEeCCcCcccccccCCCCC---CCCCCceEEECCCCcCceecCCCCC-CceEEEeeC
Confidence 46799999984 357899999999999999999999 357899999765443 799999987 678999863
No 125
>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA raven protein, solution backbone fold, C- type lectin; NMR {Hemitripterus americanus} SCOP: d.169.1.1
Probab=98.90 E-value=2.9e-10 Score=106.25 Aligned_cols=70 Identities=24% Similarity=0.640 Sum_probs=59.6
Q ss_pred ccceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 202 KTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 202 ~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
....+||||++. ..++.|+|+||++++|.+|+++||++..+ ++||.|....+.+|+|..|.. .+.|||+.
T Consensus 58 ~~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~~~P~~~~~-~~C~~~~~~~~~~w~~~~C~~-~~~~iCe~ 127 (129)
T 2afp_A 58 NAGVVWIGGSAC--LQAGAWTWSDGTPMNFRSWCSTKPDDVLA-ACCMQMTAAADQCWDDLPCPA-SHKSVCAM 127 (129)
T ss_dssp CSSCBCCSCBCS--SSSSCCBSSSSCCCCCCCSSSCCSCCSTT-CCBCCBCCSSSSCBCCBCSCC-CCCCCEEE
T ss_pred CCCCEEEccccc--CCCCceEeCCCCccccCCcCCCccCCCCC-CCCeEEccCCCCEEeCCCCCC-CcceEEee
Confidence 446699999984 35789999999999999999999998654 999999876555799999987 68899986
No 126
>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted, inflammatory response, acute phase; 1.78A {Homo sapiens} SCOP: d.169.1.1 PDB: 2go0_A
Probab=98.89 E-value=8.3e-10 Score=105.86 Aligned_cols=69 Identities=22% Similarity=0.680 Sum_probs=57.3
Q ss_pred cceEEEEeeeCCCCcccc-----EEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITART-----WKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~-----w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++.. .++. |.|+||++++|.+|+++||++ .+.++||.|....+ ++|+|..|.. .+.|||+.
T Consensus 73 ~~~~WiGl~~~~--~~~~~~~~~w~W~dg~~~~~~~W~~~~P~~-~~~~~Cv~~~~~~~~~~W~d~~C~~-~~~fICe~ 147 (149)
T 1uv0_A 73 YSYVWIGLHDPT--QGTEPNGEGWEWSSSDVMNYFAWERNPSTI-SSPGHCASLSRSTAFLRWKDYNCNV-RLPYVCKF 147 (149)
T ss_dssp CCEEEEEEECTT--TTCC--CCCCEETTCCCCCCCCBSSCGGGS-SSCCSEEEEEGGGTTCSEEEECTTS-CEEEEEEE
T ss_pred CCCEEEeeEccC--CCCccCCCccEECCCCccCccCcCCCCcCC-CCCCCCEEEEcCCCCCeEeCcCCCC-CCceEEee
Confidence 467999999842 3444 999999999999999999987 35799999976433 5899999987 67899986
No 127
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus, virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Probab=98.89 E-value=2.3e-09 Score=105.83 Aligned_cols=75 Identities=35% Similarity=0.883 Sum_probs=62.6
Q ss_pred ccceEEEEeeeCCCCccccEEEecCCCCCC---CCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCCC
Q psy11954 202 KTLLVWIGAQKDPGITARTWKWVDGEVVTK---PSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPA 278 (881)
Q Consensus 202 ~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~---~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~ 278 (881)
....|||||++. ..++.|+|+||+++++ .+|+++||++. +.++||.|... .|+|..|.. .+.|||+....
T Consensus 81 ~~~~~WIGl~~~--~~~~~w~W~dGs~~~~~~~~~W~~geP~~~-~~~~Cv~~~~~---gW~d~~C~~-~~~fICe~~~~ 153 (175)
T 2b6b_D 81 SNRFTWMGLSDL--NQEGTWQWVDGSPLLPSFKQYWNRGEPNNV-GEEDCAEFSGN---GWNDDKCNL-AKFWICKKSAA 153 (175)
T ss_pred CCCcEEEeeEcc--CCCCcEEeCCCCCcccccccCCCCCCCCCC-CCCCeeEEcCC---ceEccCCCC-CeeEEEEECCC
Confidence 346799999984 3578999999999874 79999999976 57999999764 299999987 67899999888
Q ss_pred CCCCC
Q psy11954 279 NCGSP 283 (881)
Q Consensus 279 ~C~~p 283 (881)
.|..+
T Consensus 154 ~C~~~ 158 (175)
T 2b6b_D 154 SCSRD 158 (175)
T ss_pred CCCCC
Confidence 88754
No 128
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Probab=98.88 E-value=1.5e-09 Score=101.21 Aligned_cols=66 Identities=29% Similarity=0.835 Sum_probs=56.2
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCC--CCCCCCCCCCCCC-----CCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVV--TKPSWGKDQPNNY-----NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~--~~~~W~~~ep~~~-----~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ++.|+|+||+++ .|.+|+++||++. .+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 54 ~~~~WIGl~~~----~~~~~W~dg~~~~~~~~~W~~g~P~~~~~~~~~~~~~C~~~~~--~g~W~~~~C~~-~~~fICe~ 126 (128)
T 1dv8_A 54 PVNTWMGLHDQ----NGPWKWVDGTDYETGFKNWRPEQPDDWYGHGLGGGEDCAHFTD--DGRWNDDVCQR-PYRWVCET 126 (128)
T ss_dssp SSCEEEEEECT----TSSCEETTCCCSTTSCCCBCTTCCCCCCTTSSSSCCCEEEECT--TSCEEEECTTS-CBEEEEEE
T ss_pred CCCEEeeEEcC----CCcEEeCCCCcCCcccccCCCCCCCCcccccCCCCCcCceecC--CCcCCCccCCC-Ccceeeee
Confidence 35799999972 689999999998 8999999999975 35799999974 35799999987 67899985
No 129
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin, C-type lectin, alpha-helical coiled coil, carbohydrate recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A* 3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A* 2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A* 1b08_A 3g84_A* ...
Probab=98.88 E-value=4.8e-10 Score=111.09 Aligned_cols=68 Identities=21% Similarity=0.481 Sum_probs=58.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|.|+||++++|++|+++||++..+.++||.|.. .++|+|..|.. .+.|||+.
T Consensus 110 ~~~~WIGl~~~--~~~~~w~W~dG~~~~y~~W~~geP~~~~~~~~Cv~~~~--~g~W~d~~C~~-~~~fICe~ 177 (177)
T 1pwb_A 110 NEAAFLSMTDS--KTEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFT--NGKWNDRACGE-KRLVVCEF 177 (177)
T ss_dssp TCCEECSCBCS--SSTTCCBCTTSCBCSCCCBCTTCCCCGGGCCCEEEECT--TSCEEEECTTS-EEEEEEEC
T ss_pred CCcEEEEEecc--CcCCceEeCCcCCcccCCcCCCcCCCCCCCCCcEEECC--CCcEeCCCCCC-CeeEEEeC
Confidence 36799999984 45889999999999999999999998666899999974 35799999986 67899973
No 130
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized low density lipoprotein receptor, LOX-1, CTLD, C- type lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1 PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Probab=98.88 E-value=1e-09 Score=103.32 Aligned_cols=68 Identities=18% Similarity=0.368 Sum_probs=58.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCC-CCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVV-TKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~-~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. ..++.|+|+||+++ .|.+|+++||++..+.++||.|.. ++|+|..|.. .+.|||+..
T Consensus 64 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~~w~~g~P~~~~~~~~Cv~~~~---~~w~~~~C~~-~~~fICe~~ 132 (135)
T 1ypq_A 64 SFPFWMGLSRR--NPSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQR---GAVYAENCIL-AAFSICQKK 132 (135)
T ss_dssp CCCEEEEEEES--STTSCCEETTSCBCCTTSCCEEESCSCCCTTCEEEEEET---TEEEEEETTS-CBEEEEEEE
T ss_pred CCCEEEecccc--CCCCCeEeCCcCccCcccccccCCCCCCCCCCCeeEEeC---CcEEccCCCC-CeeeEeeec
Confidence 45699999984 35789999999999 589999999998777899999975 3699999986 678999863
No 131
>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC; 2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A
Probab=98.84 E-value=1.9e-09 Score=107.49 Aligned_cols=73 Identities=33% Similarity=0.822 Sum_probs=60.6
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCC---CCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTK---PSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPAN 279 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~---~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~~ 279 (881)
...|||||++. ..++.|.|+||+++++ ++|+++||++. +.++||.|... .|+|..|.. .+.|||+....
T Consensus 108 ~~~~WIGl~~~--~~~~~w~W~DGs~~~~~~~~~W~~geP~~~-~~~~Cv~~~~~---gW~d~~C~~-~~~fICe~~~~- 179 (184)
T 1sl6_A 108 NRFSWMGLSDL--NQEGTWQWVDGSPLSPSFQRYWNSGEPNNS-GNEDCAEFSGS---GWNDNRCDV-DNYWICKKPAA- 179 (184)
T ss_dssp TCCEEEEEECC--SSTTCCEETTSCBCCGGGGGGBCTTCCCCT-TSCCEEEEETT---EEEEECTTS-CBEEEEEEECB-
T ss_pred CccEEEEEEcc--CCCCCeEecCCCccCCcccCCCCCCCCCCC-CCCCceEEeCC---cEEccCCCC-CeeEEEeECCc-
Confidence 45699999984 3578999999999874 79999999986 67999999864 399999987 67899998665
Q ss_pred CCCC
Q psy11954 280 CGSP 283 (881)
Q Consensus 280 C~~p 283 (881)
|+.+
T Consensus 180 C~~~ 183 (184)
T 1sl6_A 180 CFRD 183 (184)
T ss_dssp SCC-
T ss_pred CCCC
Confidence 8865
No 132
>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_A
Probab=98.82 E-value=1.9e-09 Score=101.48 Aligned_cols=66 Identities=26% Similarity=0.515 Sum_probs=56.0
Q ss_pred eEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecCCCCC
Q psy11954 205 LVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHNPANC 280 (881)
Q Consensus 205 ~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~~~~C 280 (881)
.+||||+ + ...++.|.|+||++++|++|+++||+ +||.|..... ++|+|..|+. .+.|||+..+ .|
T Consensus 67 ~~WIGl~~~~--~~~~~~~~W~dg~~~~~~~W~~~~P~------~C~~~~~~~~~~~W~d~~C~~-~~~fICe~~~-sC 135 (135)
T 1c3a_A 67 YVWIGLRIQN--KEQQCRSEWSDASSVNYENLVKQFSK------KCYALKKGTELRTWFNVYCGT-ENPEVCKYTP-EC 135 (135)
T ss_dssp EEEEEEEECC--CSSSCCCBCTTSCBCCCCCBCGGGCC------CEEEEETTSCSCSBEEECTTS-CEEEEEEECC-CC
T ss_pred cEEecccccC--CCCCCceEECCCCcccccccCCCCCC------cceEEeccCCCCeEccCCCCC-CccEEcccCC-CC
Confidence 7999999 6 34588999999999999999999997 8999987543 6899999987 6789999743 55
No 133
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding, mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A* 2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Probab=98.82 E-value=2.2e-09 Score=105.57 Aligned_cols=74 Identities=35% Similarity=0.860 Sum_probs=60.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCC---CCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVT---KPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPAN 279 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~---~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~~ 279 (881)
...|||||++. ..++.|.|+||+++. |.+|+++||++. +.++||.|... .|+|..|.. .+.|||+.....
T Consensus 77 ~~~~WIGl~~~--~~~~~w~W~dG~~~~~~~~~~W~~geP~~~-~~~~Cv~~~~~---gW~d~~C~~-~~~fICe~~~~~ 149 (170)
T 2xr6_A 77 NRFTWMGLSDL--NQEGTWQWVDGSPLLPSFKQYWNRGEPNNV-GEEDCAEFSGN---GWNDDKCNL-AKFWICKKSAAS 149 (170)
T ss_dssp TCCEEEEEEEE--EETTEEEETTSCBCCGGGGGGBCTTCCCCT-TCCCEEEEETT---EEEEECTTS-CBEEEEEEETTT
T ss_pred CCCEEeccccC--CCCCeEEeCCCCCcccccccCCCCCCCCCC-CCCCCeEEeCC---cEEccccCC-CccEEEEECCCC
Confidence 45699999983 357899999999987 379999999976 57999999864 399999987 678999998778
Q ss_pred CCCC
Q psy11954 280 CGSP 283 (881)
Q Consensus 280 C~~p 283 (881)
|..+
T Consensus 150 C~~~ 153 (170)
T 2xr6_A 150 SSRD 153 (170)
T ss_dssp C---
T ss_pred CCCC
Confidence 8855
No 134
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=98.81 E-value=3.4e-09 Score=107.35 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=85.6
Q ss_pred CCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCC---CCCCcccEEEEc
Q psy11954 26 RPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCG---HQPLQDLEIRVG 101 (881)
Q Consensus 26 k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~---~~~~~~~~i~v~ 101 (881)
...++||.+. ...|.+|.+++..+.|... ..+..+|+|||||..+.|..|.+..|.+-. .+....|.|..+
T Consensus 20 ~qITASS~~~~~~~P~~ARLn~~~~aW~a~-----~~d~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~~VtsY~l~yS 94 (218)
T 4deq_A 20 DQITASSQYSTNWSAERSRLNYPENGWTPG-----EDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVS 94 (218)
T ss_dssp GGEEESCCSCGGGCGGGCBTTCSSCCBCCS-----SCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEE
T ss_pred ccEEEeccCCCCCChhHeEEcCCCCeECCC-----CCCCCCeEEEeCCCcEEEEEEEEEeccCCCCCccceEEEEEEEEE
Confidence 3456788765 4689999999887777543 245789999999999999999998774311 134567777777
Q ss_pred cCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceE
Q psy11954 102 NSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLS 181 (881)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~ 181 (881)
.+.. .|..+.+.. .-.+|.+...........+.+++.||||||....-.....
T Consensus 95 ~DG~--------------~W~~y~~~~-------------~~kvF~GN~D~~t~v~~~l~~Pi~ARyVRi~P~~w~~~i~ 147 (218)
T 4deq_A 95 SNGE--------------DWITIKEGN-------------KPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGIS 147 (218)
T ss_dssp SSSS--------------SCEECEETT-------------EECCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESSCC
T ss_pred eCCC--------------ceEEeecce-------------eeecccCcCCCCceEEEeCCCCEEEEEEEEEeeeecCCcE
Confidence 6632 333332210 0112322222223334444568999999999875444455
Q ss_pred eeEEEeeccc
Q psy11954 182 LCEVEIFTTD 191 (881)
Q Consensus 182 l~EveV~g~~ 191 (881)
| .|||||=+
T Consensus 148 l-RvElyGC~ 156 (218)
T 4deq_A 148 M-RFEVYGCK 156 (218)
T ss_dssp B-EEEEEEEC
T ss_pred E-EEEEEeec
Confidence 5 68999863
No 135
>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like, platelets, thrombosis; 1.6A {Homo sapiens}
Probab=98.81 E-value=1e-09 Score=101.38 Aligned_cols=65 Identities=22% Similarity=0.527 Sum_probs=55.6
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..|||||++. ..++.|+|+||++++| +|++++|++. +.++||.|.. ++|+|..|.. .+.|||+..
T Consensus 56 ~~~WiGl~~~--~~~~~~~W~dg~~~~~-~W~~~~P~~~-~~~~C~~~~~---g~w~~~~C~~-~~~~ICe~~ 120 (122)
T 2c6u_A 56 LIRWVGLSRQ--KSNEVWKWEDGSVISE-NMFEFLEDGK-GNMNCAYFHN---GKMHPTFCEN-KHYLMCERK 120 (122)
T ss_dssp SCEEEEEECS--STTSCCBCTTSCBCCG-GGGGGBCCCC-TTCCEEEEET---TEEEEECTTS-CEEEEEEEE
T ss_pred CCEEEEeeec--CCCCCeEeCCCCccCc-CcccCCCCCC-CCCCeeEEcC---CeEEeccCCC-CceEeeeec
Confidence 4589999984 3578999999999999 9999999986 6789999953 4799999986 678999863
No 136
>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_A*
Probab=98.81 E-value=1.5e-09 Score=101.96 Aligned_cols=65 Identities=22% Similarity=0.554 Sum_probs=54.5
Q ss_pred eEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 205 LVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 205 ~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
.|||||++.....++.|.|+||++++|.+|+++||+ +||.|..... ++|+|..|.. .+.|||+..
T Consensus 67 ~~WIGl~~~~~~~~~~~~W~dg~~~~~~~W~~g~P~------~C~~~~~~~~~~~W~~~~C~~-~~~~ICe~~ 132 (134)
T 1ukm_A 67 YVWIGLRDRREEQQCNPEWNDGSKIIYVNWKEGESK------MCQGLTKWTNFHDWNNINCED-LYPFVCKFS 132 (134)
T ss_dssp EEEEEEEECCSSSCSCCBCTTSCBCCCCCBCTTCCC------CEEEEEGGGTSCSEEEECTTS-CEEEEEEEE
T ss_pred CEEEeeecCCCCCCCceEEcCcCccccceECCCcCc------cceEEEecCCCCeeecCCCCC-CceeEEeEc
Confidence 799999984103478999999999999999999997 8999976433 6899999986 778999863
No 137
>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW YORK structural genomics research consortium, nysgrc, PSI-biology, immune system; NMR {Homo sapiens}
Probab=98.30 E-value=5.2e-10 Score=108.37 Aligned_cols=74 Identities=31% Similarity=0.717 Sum_probs=60.0
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCC--CCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecCCCCC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVV--TKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHNPANC 280 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~--~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~~~~C 280 (881)
..|||||++. ..++.|+|+||+++ +|.+|+++||++. +.++||.|....+ ++|+|..|.. .+.|||+..+...
T Consensus 58 ~~~WIGl~~~--~~~~~w~W~dG~~~~~~~~~W~~g~P~~~-~~~~Cv~l~~~~~~~~W~d~~C~~-~~~fICe~~~~~~ 133 (156)
T 2ls8_A 58 LSYFLGLRDE--NAKGQWRWVDQTPFNPRRVFWHKNEPDNS-QGENCVVLVYNQDKWAWNDVPCNF-EASRICKIPGTTL 133 (156)
Confidence 4599999984 35789999999988 6899999999974 4789999976433 5899999986 6789999866443
Q ss_pred C
Q psy11954 281 G 281 (881)
Q Consensus 281 ~ 281 (881)
+
T Consensus 134 ~ 134 (156)
T 2ls8_A 134 N 134 (156)
Confidence 3
No 138
>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_A
Probab=98.80 E-value=1.8e-09 Score=101.76 Aligned_cols=64 Identities=22% Similarity=0.446 Sum_probs=54.7
Q ss_pred ceEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 204 LLVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..+||||+ +. ..++.|+|+||++++|.+|+++||+ +||.|..... ++|+|..|+. .+.|||+..
T Consensus 68 ~~~WIGl~~~~~--~~~~~~~W~dg~~~~~~~W~~~~P~------~C~~~~~~~~~~~W~~~~C~~-~~~fICe~~ 134 (136)
T 3bx4_A 68 DYVWIGLRAQNK--EQQCSSEWSDGSSVSYENLIDLHTK------KCGALEKLTGFRKWVNYYCEQ-MHAFVCKLL 134 (136)
T ss_dssp CEEEEEEEECCC--SSSSCCBCTTSCBCCCCCCTTCCCC------CEEEEEGGGTTTSEEEECTTS-CEEEEEEEC
T ss_pred CCEEEeeeccCC--CCCCceEeCCCCccCcccccCCCCC------ccEEEEecCCCCeEeCCCCCC-CcceEEeec
Confidence 56999999 63 4688999999999999999999997 8999976433 6899999997 678999863
No 139
>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus} SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*
Probab=98.79 E-value=3.4e-09 Score=98.12 Aligned_cols=64 Identities=17% Similarity=0.412 Sum_probs=54.8
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..+||||++. ..++.|+|+||++++|.+|++++|+ +++||.|... ++|+|..|+. .+.|||+..
T Consensus 58 ~~~WIGl~~~--~~~~~w~W~dg~~~~~~~w~~~~p~----~~~C~~~~~~--~~w~~~~C~~-~~~fICe~~ 121 (123)
T 1hq8_A 58 SYHWMGLVQI--PANGSWQWEDGSSLSYNQLTLVEIP----KGSCAVYGSS--FKAYTEDCAN-LNTYICMKR 121 (123)
T ss_dssp SCEEEEEEEC--TTTCCEEETTSCBCCTTTCEEECCT----TCCEEEECST--TEEEEECTTS-CEEEEEEEC
T ss_pred CCEEEEeeec--CCCCCeEeCCCCCccccccccCCCC----CCCcEEEecc--CCEeccCCCC-CceeEeeee
Confidence 5699999984 3578999999999999999999996 4799999754 4799999986 678999864
No 140
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type lectin-like domain, CTLD, carbohydrate; 1.5A {Mus musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Probab=98.78 E-value=3.6e-09 Score=100.65 Aligned_cols=67 Identities=22% Similarity=0.389 Sum_probs=55.4
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCC-CCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKD-QPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~-ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|+|+||++++|.+|..+ +|++..+.++||.|.. ++|+|..|+. .+.|||+.
T Consensus 73 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~w~~~~~~~~~~~~~~Cv~~~~---~~W~d~~C~~-~~~fICe~ 140 (142)
T 2bpd_A 73 INAFWIGLSRN--QSEGPWFWEDGSAFFPNSFQVRNAVPQESLLHNCVWIHG---SEVYNQICNT-SSYSICEK 140 (142)
T ss_dssp TSEEEEEEECS--STTSCCEETTSCBCCSSSCCEECCCCSCCSCCCEEEEET---TEEEEECTTS-CEEEEEEE
T ss_pred CCCEEEEeecC--CCCCCeEeCCCCccccccccccCCCCCCCCCCCCcEEcC---CeEECcCCCC-Cceeeeee
Confidence 46799999984 3578999999999999999865 4555456899999975 3799999987 77899986
No 141
>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B 1u0n_B 1u0o_A
Probab=98.78 E-value=2.9e-09 Score=99.84 Aligned_cols=65 Identities=23% Similarity=0.541 Sum_probs=55.7
Q ss_pred cceEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...+||||+ +. ..++.|+|+||++++|++|++ ||+ ++||.|..... ++|+|..|.. .+.|||+..
T Consensus 64 ~~~~WIGl~~~~~--~~~~~w~W~dg~~~~~~~W~~-~P~-----~~C~~~~~~~~~~~w~~~~C~~-~~~fICe~~ 131 (133)
T 1fvu_A 64 DLYAWIGLRVENK--EKQCSSEWSDGSSVSYENVVE-RTV-----KKCFALEKDLGFVLWINLYCAQ-KNPFVCKSP 131 (133)
T ss_dssp CCEEEEEEEECCS--SSSSCCBCTTSCBCCCCCBCG-GGC-----CCEEEEETTTTSCSEEEECTTC-CEEEEEEEC
T ss_pred CCCEEEeeecccC--CCCCccEeCCCCcccccCccc-CCC-----CCcEEEEecCCCCeEecCCCCC-CCCEEeeec
Confidence 467999999 63 458899999999999999999 997 79999987543 6899999996 788999864
No 142
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=98.78 E-value=1.6e-08 Score=99.63 Aligned_cols=135 Identities=13% Similarity=0.036 Sum_probs=84.6
Q ss_pred CCCceeccCCC-CCCCCCCcCCCC--CCCcCCCceeccC--CCC-CCcEEEEcCCeEEEEEEEEEccCCC--CCCCCccc
Q psy11954 25 RRPTNQSSTIR-GAPSSNANDGEL--TTVHDGKRCTETQ--KEV-SPWWQVDLLRPYPIRIVRITTRGCC--GHQPLQDL 96 (881)
Q Consensus 25 ~k~a~qSS~~~-~~~a~~AvDG~~--~~~~~~~~c~~t~--~~~-~pWw~VDLg~~~~i~~V~i~nr~d~--~~~~~~~~ 96 (881)
....++||.+. ...|.+|...+. .+.|. .... .+. ++|+||||++.+.|..|.+..|.+- ..+....|
T Consensus 31 d~~itASS~~~~~~~p~~aRL~~~~~~~aW~----a~~~~~~d~~~qWLQVDLg~~~~VtgV~tQG~~~~~~~~~~vt~Y 106 (178)
T 2wuh_A 31 DEDITASSQWSESTAAKYGRLDSEEGDGAWC----PEIPVEPDDLKEFLQIDLHTLHFITLVGTQGRHAGGHGIEFAPMY 106 (178)
T ss_dssp GGGEEESCCSSGGGSGGGCBTTCCSTTSSBC----CSSCBBTTBCCCCEEEEEEEEEEEEEEEEECCCGGGTCCCCCSEE
T ss_pred CcCEEEcCccCcccChhhheecCCCCCCeec----CCcCCCCCCCCCEEEEecCCceEEeEEEEecccCCCCccceeEEE
Confidence 34577888874 357888886654 44564 3333 134 8999999999999999999987531 23567788
Q ss_pred EEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC
Q psy11954 97 EIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV 176 (881)
Q Consensus 97 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~ 176 (881)
+|..+.+.. .|..+.+. ... .+|.+..+........+.+++.+|||||....-
T Consensus 107 ~l~yS~Dg~--------------~W~~y~~~----------~~~---kvF~GN~D~~t~v~~~l~~pi~ARyVRi~p~~w 159 (178)
T 2wuh_A 107 KINYSRDGT--------------RWISWRNR----------HGK---QVLDGNSNPYDIFLKDLEPPIVARFVRFIPVTD 159 (178)
T ss_dssp EEEEESSSS--------------SCEECCCT----------TSC---CCEECCSSSSSCEEEEEEEEEEEEEEEEEEECS
T ss_pred EEEEEcCCC--------------cEEEEecC----------Ccc---ccccccCCCCceEEEeCCCCeEEEEEEEEEEee
Confidence 888877733 23333221 000 123332222233333444579999999998864
Q ss_pred cc-ceEeeEEEeeccc
Q psy11954 177 EG-SLSLCEVEIFTTD 191 (881)
Q Consensus 177 ~~-~l~l~EveV~g~~ 191 (881)
.. ...| .|||||-+
T Consensus 160 ~~~~i~l-RvElyGC~ 174 (178)
T 2wuh_A 160 HSMNVCM-RVELYGCV 174 (178)
T ss_dssp SCBCCCB-EEEEEEEE
T ss_pred cCCCeEE-EEEEeccc
Confidence 43 3556 59999853
No 143
>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type lectin-like domain, membrane, immune; 1.64A {Homo sapiens}
Probab=98.77 E-value=6.5e-09 Score=97.36 Aligned_cols=68 Identities=18% Similarity=0.446 Sum_probs=52.6
Q ss_pred ccceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCC
Q psy11954 202 KTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNP 277 (881)
Q Consensus 202 ~~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~ 277 (881)
....|||||++. ..++.|+|+||++++|.+|..++|++ +.++||.|..+ +|+|..|.. .+.|||+..+
T Consensus 60 ~~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~w~~~~p~~--~~~~C~~~~~~---~w~~~~C~~-~~~fiCe~~~ 127 (132)
T 3vpp_A 60 GSYDYWVGLSQD--GHSGRWLWQDGSSPSPGLLPAERSQS--ANQVCGYVKSN---SLLSSNCDT-WKYFICEKYA 127 (132)
T ss_dssp SCCEEEEEEEEC--TTTCCEEETTSCCCCTTSCCCC--------CEEEEEETT---EEEEEESSS-CBEEEEEEEC
T ss_pred CCccEEEEeccc--CCCCceEecCCCcCChhhcccCCCCC--CCCceEEEECC---eEeccCCCC-CceEECCccc
Confidence 345799999984 35789999999999999999888874 57899999753 699999986 6789998744
No 144
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=98.75 E-value=6e-09 Score=113.16 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=89.6
Q ss_pred cCCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC---CCCCCcccEE
Q psy11954 23 ALRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC---GHQPLQDLEI 98 (881)
Q Consensus 23 A~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~---~~~~~~~~~i 98 (881)
-.....++||.+. ...|.+|.|++..+.|... ..+.++|+|||||+.+.|..|.+..|.+- ..+....|+|
T Consensus 18 I~d~~itASS~~~~~~~p~~arl~~~~~~W~~~-----~~~~~qwlqVDLg~~~~v~~v~tqg~~~~~~~~~~~v~~y~i 92 (318)
T 2qqi_A 18 IHSDQITASSQYSTNWSAERSRLNYPENGWTPG-----EDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKI 92 (318)
T ss_dssp SCGGGEEESCCSCGGGCGGGGBTTCSSCCBCCS-----SCCTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEE
T ss_pred cchHHEEEeecCCCcCChhhhhhcCCCCeEcCC-----CCCCCceEEEccCCcEEEEeeeeeccccCCCCccEeEEEEEE
Confidence 3356778899875 4679999999987788543 23578999999999999999999877532 1245667888
Q ss_pred EEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCcc
Q psy11954 99 RVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEG 178 (881)
Q Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~ 178 (881)
..+.+.. .|+.+.+.. .-..|.+...........+.+++.+|||||.......
T Consensus 93 ~~S~Dg~--------------~W~~~~~~~-------------~~~~f~GN~d~~~~v~~~l~~pi~aRyVRi~p~~~~~ 145 (318)
T 2qqi_A 93 DVSSNGE--------------DWITIKEGN-------------KPVLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWET 145 (318)
T ss_dssp EEESSSS--------------SCEECEETT-------------EECCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEES
T ss_pred EEecCCC--------------eEEEEeCCC-------------eeEEEECCcCCCceeEeccCCCeeEEEEEEEEeeccc
Confidence 7776632 233332210 0011222222222233334457999999999986555
Q ss_pred ceEeeEEEeeccc
Q psy11954 179 SLSLCEVEIFTTD 191 (881)
Q Consensus 179 ~l~l~EveV~g~~ 191 (881)
.+.| +|||||-+
T Consensus 146 ~~~l-r~ElyGc~ 157 (318)
T 2qqi_A 146 GISM-RFEVYGCK 157 (318)
T ss_dssp SCCB-EEEEEEEC
T ss_pred eeEE-EEEecccc
Confidence 6777 99999975
No 145
>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like domain, immune system; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 1hyr_B
Probab=98.75 E-value=5.9e-09 Score=98.59 Aligned_cols=64 Identities=17% Similarity=0.413 Sum_probs=54.9
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..|||||++. ..++.|.|+||++++|.+|++++|+ +++||.|... ++|+|..|.. .+.|||+..
T Consensus 73 ~~~WIGl~~~--~~~~~w~W~dG~~~~~~~w~~~~p~----~~~C~~~~~~--~~w~~~~C~~-~~~fICe~~ 136 (138)
T 1mpu_A 73 SYHWMGLVHI--PTNGSWQWEDGSILSPNLLTIIEMQ----KGDCALYASS--FKGYIENCST-PNTYICMQR 136 (138)
T ss_dssp SEEEEEEEEC--TTTCCEEETTSCBCCTTSCEEECSS----CCSEEEEETT--TEEEEECTTS-CEEEEEEEC
T ss_pred CCEeEeeecc--CCCCceEeCCCCcCCccccccCCCC----CCCCeEEECC--CcEEccCCCC-CCeEcccCc
Confidence 5799999984 3588999999999999999999996 4799999864 3799999986 678999864
No 146
>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type lectin, metal- binding, loop exchanged dimer, toxin; 1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C 1u0n_C 1u0o_B
Probab=98.74 E-value=4.5e-09 Score=97.37 Aligned_cols=63 Identities=19% Similarity=0.433 Sum_probs=50.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|+|+||++++|.+|++++|+ +||.|.... ++|+|..|.. .+.|||+.
T Consensus 61 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~w~~~~P~------~C~~~~~~~-g~w~~~~C~~-~~~~iCe~ 123 (125)
T 1fvu_B 61 GDVVWIGLSDV--WNKCRFEWTDGMEFDYDDYYLIAEY------ECVASKPTN-NKWWIIPCTR-FKNFVCEF 123 (125)
T ss_dssp TCCEECSCCCC--STTSCEEETTSCCCCC----CCSCC------EEEEEETTT-TEEEEEETTS-CEEEEEEE
T ss_pred CCCEEEeeeec--CCCCceEecCCCccCccccCCCCCC------CceEEECCC-CcEeCCcCCC-CCcEEEee
Confidence 46799999983 3578999999999999999999997 899998753 3899999987 67899986
No 147
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=98.74 E-value=4.1e-08 Score=106.52 Aligned_cols=142 Identities=14% Similarity=0.080 Sum_probs=89.5
Q ss_pred cccCCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCcccEE
Q psy11954 21 NVALRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDLEI 98 (881)
Q Consensus 21 nlA~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~~i 98 (881)
++..++..++||... ...|.+|.|++..+.|... .....+.++|+|||||+.+.|..|.+..|.+- ..+....|+|
T Consensus 172 g~i~d~~itASS~~~~~~~p~~arl~~~~~~W~~~--~a~~~~~~qwLqVDLg~~~~Vt~V~tqg~~~~~~~~~v~~Y~l 249 (318)
T 2qqi_A 172 GLISDSQITSSNQGDRNWMPENIRLVTSRSGWALP--PAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKI 249 (318)
T ss_dssp SCSCGGGEEETTTTSTTCCGGGGBTTCCCCSCSBC--CCTTCCSCCCEEEEEEEEEEEEEEEEEECCCTTCCCCCCCEEE
T ss_pred CcccccccccccccccccCchhhhhcccCCceeCc--ccccCCcCcEEEEeCCCceEEEEEEEcCccCCCCCeEEEEEEE
Confidence 445577888999864 4679999999987777521 01124578999999999999999999987531 2356788898
Q ss_pred EEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec-Cc
Q psy11954 99 RVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG-VE 177 (881)
Q Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g-~~ 177 (881)
..+.+.. .|.++.+... ..-..|.+...........+ +++.+|||||.... ..
T Consensus 250 ~~S~dg~--------------~W~~~~~~~~-----------~~~~~F~GN~d~~t~~~~~~-~pi~ARyVRi~p~~~~~ 303 (318)
T 2qqi_A 250 GYSNNGS--------------DWKMIMDDSK-----------RKAKSFEGNNNYDTPELRTF-PALSTRFIRIYPERATH 303 (318)
T ss_dssp EEESSSS--------------SCEECBCTTS-----------SSBCCBCCCSSSSCCEEEEE-EEEEEEEEEEEECCCSS
T ss_pred EEECCCC--------------CEEEEEcCCC-----------ccccccccccCCCceEEeeC-CCEEEEEEEEEEEeecC
Confidence 8887733 3333322110 00011222111111222233 37999999999874 23
Q ss_pred cceEeeEEEeeccc
Q psy11954 178 GSLSLCEVEIFTTD 191 (881)
Q Consensus 178 ~~l~l~EveV~g~~ 191 (881)
....| +|||||-+
T Consensus 304 ~~i~l-R~ElyGc~ 316 (318)
T 2qqi_A 304 GGLGL-RMELLGCE 316 (318)
T ss_dssp SCBCE-EEEEEEEE
T ss_pred CCeEE-EEEEEeec
Confidence 34455 79999853
No 148
>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_A
Probab=98.74 E-value=2.5e-09 Score=100.63 Aligned_cols=66 Identities=24% Similarity=0.461 Sum_probs=55.6
Q ss_pred eEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecCCCCC
Q psy11954 205 LVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHNPANC 280 (881)
Q Consensus 205 ~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~~~~C 280 (881)
.+||||+ +. ..++.|.|+||++++|.+|+++||+ +||.|..... ++|+|..|.. .+.|||+..+ .|
T Consensus 67 ~~WIGl~~~~~--~~~~~w~W~dg~~~~~~~W~~g~P~------~C~~~~~~~~~g~W~~~~C~~-~~~~ICe~~~-~C 135 (135)
T 1umr_A 67 HVSIGLRVQNK--EKQCSTKWSDGSSVSYDNLLDLYIT------KCSLLKKETGFRKWFVASCIG-KIPFVCKFPP-QC 135 (135)
T ss_dssp EEECSEEECCS--SSSSCCBCTTSCBCCCCCBCGGGCC------CEEEEEGGGTTCSBEEECTTC-CEEEEEEECC-CC
T ss_pred CEEEeccccCC--CCCCccCcCCCCeecccccCCCCCC------ccEEEecCCCCCeEecCCCCC-CCcEEeCccC-CC
Confidence 7999999 63 3578999999999999999999997 8999976433 6899999996 7789998743 35
No 149
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=98.72 E-value=1.2e-08 Score=98.90 Aligned_cols=135 Identities=12% Similarity=0.094 Sum_probs=81.1
Q ss_pred CCCceeccCCC-----CCCCCCCcCCCC--CCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCccc
Q psy11954 25 RRPTNQSSTIR-----GAPSSNANDGEL--TTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDL 96 (881)
Q Consensus 25 ~k~a~qSS~~~-----~~~a~~AvDG~~--~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~ 96 (881)
....++||... ...|.+|...+. .+.| |+.. .+.++|+|||||+.+.|..|.+..|.+- ..+....|
T Consensus 15 d~~itASS~~~~~~~~~~~p~~aRL~~~~~~~~W----~a~~-~~~~qwLqVDLg~~~~Vt~v~tqG~~~~~~~~~v~~y 89 (160)
T 1czt_A 15 NKQITASSFKKSWWGDYWEPFRARLNAQGRVNAW----QAKA-NNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSY 89 (160)
T ss_dssp GGGEEESCCCBCTTSCBCCGGGCBTTCCSSSCSE----ECSS-CSTTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEE
T ss_pred cccEEEeeecccCCCcccCcccceecCCCCCCcc----cCCC-CCCCcEEEEeCCCcEEEEEEEEeCcCCCCcccEEEEE
Confidence 35677888753 356888855442 3455 3333 3568999999999999999999877421 12356678
Q ss_pred EEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC
Q psy11954 97 EIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV 176 (881)
Q Consensus 97 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~ 176 (881)
+|..+.+.. .|+++.+.. . ..-..|.+...........+.+++.+|||||....-
T Consensus 90 ~l~yS~Dg~--------------~W~~~~~~~----------~-~~~~vF~GN~d~~t~v~~~l~~pi~ARyvRi~p~~w 144 (160)
T 1czt_A 90 TIHYSEQGV--------------EWKPYRLKS----------S-MVDKIFEGNTNTKGHVKNFFNPPIISRFIRVIPKTW 144 (160)
T ss_dssp EEEEESSSS--------------SCEECCCTT----------C-SSCCCEECCSSSSCCEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEECCCC--------------cEEEEEcCC----------C-cccccccCcCCCCceEEEecCCCEEEEEEEEEEEEe
Confidence 888776632 333332210 0 000122222222223333444579999999998865
Q ss_pred ccceEeeEEEeecc
Q psy11954 177 EGSLSLCEVEIFTT 190 (881)
Q Consensus 177 ~~~l~l~EveV~g~ 190 (881)
.....| +|||||-
T Consensus 145 ~~~~~~-R~ElyGc 157 (160)
T 1czt_A 145 NQSITL-RLELFGC 157 (160)
T ss_dssp ESSCEE-EEEEEEE
T ss_pred CCceEE-EEEEEeE
Confidence 555555 6999985
No 150
>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=98.72 E-value=2.8e-09 Score=100.08 Aligned_cols=66 Identities=26% Similarity=0.637 Sum_probs=55.3
Q ss_pred eEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecCCCCC
Q psy11954 205 LVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHNPANC 280 (881)
Q Consensus 205 ~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~~~~C 280 (881)
.|||||+ +. ..++.|.|+||++++|.+|+++||+ +||.|..... ++|+|..|+. .+.|||+.. ..|
T Consensus 66 ~~WIGl~~~~~--~~~~~~~W~dg~~~~~~~W~~~~P~------~C~~~~~~~~~~~w~~~~C~~-~~~~ICe~~-~~c 134 (134)
T 2e3x_B 66 HFWIGLMIKDK--EQECSSEWSDGSSVSYDKLGKQEFR------KCFVLEKESGYRMWFNRNCEE-RYLFVCKVP-PEC 134 (134)
T ss_dssp EEECCEEECSS--CTTTTCCCTTSCCCCCCCBCGGGCC------CEEEEEGGGTTCCBEEECTTS-EEEEEEEEC-CCC
T ss_pred CEEEeeeecCC--CCCCccEeCCCCcccccccCCCCCC------CeEEEEecCCCCcCCCCCCCC-CcceEeCcc-CCC
Confidence 7999999 73 3578999999999999999999997 8999976433 6899999986 778999873 344
No 151
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose, invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB: 2vuz_A*
Probab=98.71 E-value=6.5e-09 Score=96.96 Aligned_cols=65 Identities=28% Similarity=0.796 Sum_probs=55.2
Q ss_pred ceE--EEEeeeCCCCccccEEEec-CCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 204 LLV--WIGAQKDPGITARTWKWVD-GEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~--WiGl~~~~~~~~~~w~W~d-g~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..+ ||| .+ ..++.|+|+| |++++|.+|+++||++..+.++||.|.... |+|..|.. .+.|||+..
T Consensus 60 ~~~~~WiG-~~---~~~~~~~W~d~g~~~~~~~W~~~~P~~~~~~~~C~~~~~~~---w~~~~C~~-~~~~ICe~~ 127 (129)
T 2vuv_A 60 GSFGPWLG-GQ---KVGGAWQWSSSGAAFDYLRWGPNEPNNSGGNEDCLHYNWLS---WNDLRCHY-QASYLCQRA 127 (129)
T ss_dssp SSSCCEEE-EE---EETTEEEETTTCCBCSSCCBCTTCSCCTTSCCCEEEEETTE---EEEECTTS-CEEEEEEEE
T ss_pred CCcccccC-CC---CCCCeEEEcCCCCccccCCcCCCCCCCCCCCCCccEEcCCc---ccCCCCCC-CcceEeeec
Confidence 456 999 33 3578999999 999999999999999876789999998653 99999986 678999863
No 152
>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin, metalloproteinase, C-type lectin, hydrolase, BL clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia russellii siamensis}
Probab=98.71 E-value=1.3e-08 Score=93.90 Aligned_cols=61 Identities=16% Similarity=0.463 Sum_probs=51.8
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|+|+||++++|++|+ +|| +||.|....+ +|+|..|.. .+.|||+.
T Consensus 62 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~-~~P-------~C~~~~~~~g-~w~~~~C~~-~~~~ICe~ 122 (122)
T 2e3x_C 62 YPATWIGLGNM--WKDCRMEWSDRGNVKYKALA-EES-------YCLIMITHEK-VWKSMTCNF-IAPVVCKF 122 (122)
T ss_dssp SSEEEEEEEST--TSSSCEEETTSCCCCCCCBC-SCC-------EEEEEETTTC-CEEEEETTS-CBCCEEC-
T ss_pred CCCEEEeeeec--CCCCceEeCCCCcccccccC-CCC-------CCEEEECCCC-cEeCCCCCC-CCceeecC
Confidence 46799999984 35789999999999999999 998 8999986533 799999986 67899973
No 153
>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=98.70 E-value=8e-09 Score=96.53 Aligned_cols=66 Identities=17% Similarity=0.414 Sum_probs=54.4
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++.....++.|.|+||++++|.+|++ ||+ +||.|..... ++|+|..|.. .+.|||+..
T Consensus 62 ~~~~WIGl~~~~~~~~~~~~W~dg~~~~~~~W~~-~P~------~Cv~~~~~~~~~~w~~~~C~~-~~~fICe~~ 128 (131)
T 1oz7_A 62 MYKIWTGLSERSKEQHCSSRWSDGSFFRSYEIAI-RYS------ECFVLEKQSVFRTWVATPCEN-TFPFMCKYP 128 (131)
T ss_dssp CSEEEEEEEECCCGGGSCCBCSSSBCCSCCCCCC-SCC------CEEEEEGGGTTCSEEEECTTS-CEEEEEEEC
T ss_pred CCCEEEeeeCCCCCCCCceEECCCCeeccccccC-CCC------CeEEEEccCCCCeEeecCCCC-CCcEEeeec
Confidence 4679999998421147899999999999999999 987 8999976433 6899999996 788999874
No 154
>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A 1ixx_A 1y17_A 1wt9_A 1iod_A*
Probab=98.70 E-value=4.3e-09 Score=98.06 Aligned_cols=62 Identities=24% Similarity=0.625 Sum_probs=53.0
Q ss_pred eEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeec
Q psy11954 205 LVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 205 ~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~ 275 (881)
.|||||+ +. ..++.|.|+||++++|.+|+++||+ +||.|....+ ++|+|..|+. .+.|||+.
T Consensus 65 ~~WIGl~~~~~--~~~~~~~W~dg~~~~~~~W~~~~P~------~C~~~~~~~~~~~w~~~~C~~-~~~fiCe~ 129 (129)
T 1j34_A 65 YVWIGLRVQGK--EKQCSSEWSDGSSVSYENWIEAESK------TCLGLEKETGFRKWVNIYCGQ-QNPFVCEA 129 (129)
T ss_dssp CEEEEEEECSS--CSCSCCBCTTSCBCCCCCBCGGGSC------CEEEECGGGTTCSBEEECTTS-CEEEEEEC
T ss_pred CEEEeeecCCC--CCCCceEECCcCccceeccCCCCCC------cceEEEccCCCCeEccCCCCC-CCceEeeC
Confidence 7999999 63 3578999999999999999999997 8999975433 6899999986 67899973
No 155
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=98.70 E-value=1.9e-08 Score=105.15 Aligned_cols=134 Identities=9% Similarity=0.007 Sum_probs=88.5
Q ss_pred CCCceeccCCC-CCCCCCCcCCCCCC------CcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccE
Q psy11954 25 RRPTNQSSTIR-GAPSSNANDGELTT------VHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLE 97 (881)
Q Consensus 25 ~k~a~qSS~~~-~~~a~~AvDG~~~~------~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~ 97 (881)
.+..++||.+. ...|.+|.+++... .....+|+.. .+.++|+|||||+.+.|..|.+..|.+ ..+....|+
T Consensus 15 d~~itASS~~~~~~~p~~aRLn~~~~~~~~~~~~~~~W~a~~-~d~~qwLqVDLg~~~~Vt~V~tQG~~~-~~~~vt~Y~ 92 (257)
T 2vm9_A 15 LLNLRSSTDYNADHGVKNSILNFSNSKDASRFDGSESWSSSV-LDKNQFIVAGSDSVKHFVAISTQGRGD-HDQWVTSYK 92 (257)
T ss_dssp CSEEEESCCSSGGGSGGGCBTTCCCCCCTTSCCCCSSEECSS-CSTTCCEEEEEEEEEEEEEEEEECCSS-SSCEEEEEE
T ss_pred ccCEEEcccCCCCCCcCeEEeCCcccccccccCCCCeeeCCC-CCCCcEEeecCCCcEEEEEEEEeCCcc-CCceEEEEE
Confidence 56678888864 46799999987521 1123345544 357999999999999999999998864 335677888
Q ss_pred EEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc
Q psy11954 98 IRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE 177 (881)
Q Consensus 98 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~ 177 (881)
|..+.+.. .|+.+.+..++.| ...........+.+++.+|||||....-.
T Consensus 93 l~yS~Dg~--------------~W~~y~~~~vF~G----------------N~d~~t~v~~~l~~pi~ARyVRi~p~~w~ 142 (257)
T 2vm9_A 93 LRYTLDNV--------------NWVEYNNGEIINA----------------NKDRNSIVTINFNPPIKARSIAIHPQTYN 142 (257)
T ss_dssp EEEESSSS--------------CEEEGGGGCCEEC----------------CSSSSCCEEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEcCCC--------------cEEEEcCCceecc----------------cCCCCceEEEeCCCCceEEEEEeeeeeec
Confidence 88776632 3444433222222 22222223333445799999999988655
Q ss_pred cceEeeEEEeeccc
Q psy11954 178 GSLSLCEVEIFTTD 191 (881)
Q Consensus 178 ~~l~l~EveV~g~~ 191 (881)
....| .|||||-+
T Consensus 143 ~~i~l-R~El~Gc~ 155 (257)
T 2vm9_A 143 NHISL-RWELYALP 155 (257)
T ss_dssp SSCEE-EEEEEECC
T ss_pred CceEE-EEEeccCC
Confidence 56666 69999975
No 156
>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_A
Probab=98.70 E-value=9.9e-09 Score=96.15 Aligned_cols=65 Identities=18% Similarity=0.486 Sum_probs=55.1
Q ss_pred cceEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||+ +. ..++.|.|+||++++|.+|++ || .++||.|..... ++|+|..|.. .+.|||+..
T Consensus 63 ~~~~WIGl~~~~~--~~~~~~~W~dg~~~~~~~W~~-~P-----~~~C~~~~~~~~~~~w~~~~C~~-~~~fICe~~ 130 (133)
T 1sb2_A 63 IYRSWIGLKIENK--GQRSNLEWSDGSSISYENLYE-PY-----MEKCFLMDHQSGLPKWHTADCEE-KNVFMCKFQ 130 (133)
T ss_dssp CEEEEEEEEEECS--STTSSEEETTCCCCCCCCBSS-CC-----CEEEEEEEESSSSCEEEEECTTS-CEEEEEEEE
T ss_pred cCCEEEeeeccCC--CCCCceEECCCCcccccccCc-CC-----CCCcEEEEecCCCCeEccCCCCC-CceeEeccc
Confidence 467999999 73 357899999999999999999 98 589999976543 6899999996 788999864
No 157
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=98.70 E-value=4.1e-08 Score=92.59 Aligned_cols=130 Identities=11% Similarity=0.052 Sum_probs=83.0
Q ss_pred cccccCCC----CceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCc
Q psy11954 19 GTNVALRR----PTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQ 94 (881)
Q Consensus 19 ~~nlA~~k----~a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~ 94 (881)
..||||++ -+..||....+.|.+|+||+.++.|.. ....++|..|||++...|++|+|.-+ +..
T Consensus 5 ~~~~a~~~~g~~v~~~ss~~~~~~~~~~iDg~~~T~W~s------~g~~pq~i~I~~~~~~~is~~~i~~~------~~k 72 (139)
T 2yc2_A 5 MKDYAREENGGLVVMASCSDERFPPENMLDGKDNTFWVT------TGMFPQEFVLRLESCIRVSKITTLSL------NVR 72 (139)
T ss_dssp CEETTSSTTSCEECCCSCCBTTSCGGGGGSSCTTCCEEC------CSSSCEEEEEEEEEEEEEEEEEEEEE------SEE
T ss_pred cceehhccCCcEEEEeccCCCCCChhheECCCCCCEEeC------CCCCCeEEEEECCCceEEEEEEEEec------CCc
Confidence 46999987 555555545578999999999988842 23356799999999999999999853 456
Q ss_pred ccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEe
Q psy11954 95 DLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLV 174 (881)
Q Consensus 95 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~ 174 (881)
.++|.++.+.+.. .|+.+.. ..+......-+...|.. +..+|||||.+.
T Consensus 73 ~~~ie~s~~~~p~------------~w~~i~~-----------------~~f~~~~~~~q~~~f~~--~~~a~~lrl~i~ 121 (139)
T 2yc2_A 73 KLAVEKCDQDKPD------------QFEKVFE-----------------VELANRGDRLQTEVHQV--NIRAKYLKFILL 121 (139)
T ss_dssp EEEEEEECSSSCC------------CCEEEEE-----------------EECCCC--CCEEEEEEE--EEEEEEEEEEEE
T ss_pred EEEEEEecCCCCC------------ceEEEEE-----------------EEeecCCCCceEEEccC--CCcEEEEEEEEE
Confidence 7777776552100 1111100 01111111112223332 245999999999
Q ss_pred -cCccceEeeEEEeeccc
Q psy11954 175 -GVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 175 -g~~~~l~l~EveV~g~~ 191 (881)
+...+.+|.+|+|+|.+
T Consensus 122 s~~d~f~~iy~~~v~G~~ 139 (139)
T 2yc2_A 122 QGHGEFATVNRVSVVGGD 139 (139)
T ss_dssp EESSSCCEEEEEEEEEC-
T ss_pred eccCceEEEEEEEEEecC
Confidence 34447899999999863
No 158
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=98.69 E-value=1.1e-08 Score=98.89 Aligned_cols=131 Identities=12% Similarity=0.063 Sum_probs=80.5
Q ss_pred CceeccCCC----CCCCCCCcCCCC--CCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCcccEEE
Q psy11954 27 PTNQSSTIR----GAPSSNANDGEL--TTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDLEIR 99 (881)
Q Consensus 27 ~a~qSS~~~----~~~a~~AvDG~~--~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~~i~ 99 (881)
..++||.+. ...|.+|..... .+.| |+.. .+..+|+||||++.+.|..|.+..|.+- ..+....|+|.
T Consensus 20 ~itASS~~~~~~~~~~p~~aRL~~~~~~~aW----~a~~-~d~~qwLqVDLg~~~~VtgV~tqG~~~~~~~~~v~~y~l~ 94 (159)
T 3hny_M 20 QITASSYFTNMFATWSPSKARLHLQGRSNAW----RPQV-NNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLIS 94 (159)
T ss_dssp GEEESCCCBCSSCBCCGGGCBTTCCSSSCSB----CCSS-CSTTCCEEEEEEEEEEEEEEEEECEEETTEEEEEEEEEEE
T ss_pred HEEEecccCCCccccChhhhhhhcCCCCCcc----CCCC-CCCCCeEEcccCCcEEEEEEEeecCCCCCccceEEEEEEE
Confidence 355777664 356777777643 3445 3333 4578999999999999999999977431 12456678888
Q ss_pred EccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccc
Q psy11954 100 VGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGS 179 (881)
Q Consensus 100 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~ 179 (881)
.+.+.. .|..+.+. ..-..|.+...........+.+|+.+|||||....-...
T Consensus 95 yS~Dg~--------------~W~~~~~~-------------~~~~vF~GN~d~~t~v~~~l~~pi~ARyvRi~P~~w~~~ 147 (159)
T 3hny_M 95 SSQDGH--------------QWTLFFQN-------------GKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQ 147 (159)
T ss_dssp EESSSS--------------SCEECEET-------------TEECCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEECCC--------------cEEEEecC-------------CceEeeeccCCCCcEEEEECCCCcEEEEEEEEEEEeCCc
Confidence 776632 23333211 001123222222233444455689999999998754445
Q ss_pred eEeeEEEeecc
Q psy11954 180 LSLCEVEIFTT 190 (881)
Q Consensus 180 l~l~EveV~g~ 190 (881)
+.|. |||||=
T Consensus 148 i~lR-~El~GC 157 (159)
T 3hny_M 148 IALR-MEVLGC 157 (159)
T ss_dssp CCBE-EEEEEE
T ss_pred cEEE-EEEEcc
Confidence 5664 999983
No 159
>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin, toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP: d.169.1.1 PDB: 1v7p_B*
Probab=98.69 E-value=1.1e-08 Score=95.14 Aligned_cols=63 Identities=22% Similarity=0.626 Sum_probs=53.5
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCC-CccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGR-GWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~-~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...+||||++. ..++.|+|+||++++|.+|+ +|| +||.|.... .++|+|..|.. .+.|||+..
T Consensus 60 ~~~~WiGl~~~--~~~~~~~W~dg~~~~~~~W~-g~P-------~C~~~~~~~~~~~w~~~~C~~-~~~fICe~~ 123 (128)
T 1ukm_B 60 FTSMWIGLNNP--WKDCKWEWSDNARFDYKAWK-RRP-------YCTVMVVKPDRIFWFTRGCEK-SVSFVCKFL 123 (128)
T ss_dssp SCEEEEEEECT--TTTCCEEETTCCCCCCCCBC-CCC-------EEEEEEECSSCEEEEEEETTS-CEEEEEEEE
T ss_pred cCcEEEecccC--CCCCceEeCCCCccccCCCC-CCC-------CcEEEeCCCCCCeEeCCCCCC-CcCeEeeec
Confidence 46799999984 35789999999999999999 998 899996533 37899999986 678999874
No 160
>3bdw_A Natural killer cells antigen CD94; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1 PDB: 3cdg_J 1b6e_A 3cii_G
Probab=98.68 E-value=9.5e-09 Score=95.00 Aligned_cols=66 Identities=18% Similarity=0.434 Sum_probs=55.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. ..++.|.|+||+++++.+|..++|+ +.++||.|... ++|+|..|.. .+.|||+..
T Consensus 56 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~w~~~~~~---~~~~C~~~~~~--~~w~d~~C~~-~~~fICe~~ 121 (123)
T 3bdw_A 56 QQFYWIGLSYS--EEHTAWLWENGSALSQYLFPSFETF---NTKNCIAYNPN--GNALDESCED-KNRYICKQQ 121 (123)
T ss_dssp CCCEECSEEEE--TTTTEEEETTSCBCCTTTSGGGGGC---CTTSEEEEETT--TEEEEECTTS-CBEEEEEEC
T ss_pred cCCEEeeeecC--CCCCcEEeeCCCcCCcccccccCCC---CCCCCcEEcCC--CcEEccCCCC-CCeeeEeEe
Confidence 46799999984 3578999999999999999987775 46899999764 4799999986 678999864
No 161
>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis carinatus} SCOP: d.169.1.1
Probab=98.67 E-value=1.3e-08 Score=93.99 Aligned_cols=61 Identities=23% Similarity=0.705 Sum_probs=52.2
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|.|+||++++|.+|+ +|| +||.|.... ++|+|..|.. .+.|||+.
T Consensus 61 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~-g~P-------~C~~~~~~~-g~w~~~~C~~-~~~~ICe~ 121 (123)
T 1oz7_B 61 NDLVWIGLTDY--WRDCNWEWSDGAQLDYKAWD-NER-------HCFIYKNTD-NQWTRRDCTW-TFSFVCKC 121 (123)
T ss_dssp CSEEEEEEECC--CCGGGEEETTCCCCCSCCBC-SST-------TEEEEEGGG-TEEEEECTTS-CEEEEEEE
T ss_pred CCCEEEeeeeC--CCCCCEEEcCCCcccccCCC-CCC-------CeEEEECCC-CcEeCCCCCC-CeeEEEeE
Confidence 46799999984 35789999999999999999 998 899997543 3899999986 77899986
No 162
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_B
Probab=98.67 E-value=1.8e-08 Score=93.42 Aligned_cols=61 Identities=21% Similarity=0.468 Sum_probs=52.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|+|+||++++|.+|+++|| ||.|... +++|+|..|.. .+.|||+.
T Consensus 63 ~~~~WiGl~~~--~~~~~~~W~dg~~~~~~~W~~g~p--------C~~~~~~-~~~W~~~~C~~-~~~~iCe~ 123 (125)
T 1jwi_B 63 IVLVWIGLSHF--WRICPLRWTDGARLDYRALSDEPI--------CFVAESF-HNKWIQWTCNR-KKSFVCKY 123 (125)
T ss_dssp CCEEEEEEEEC--GGGSCEEETTCCCCCSCCSCCSCE--------EEEEETT-TCCEEEEETTS-CEEEEEEE
T ss_pred CCCEEEeeecC--CCCCceEeeCcCcCccCCcCCCCC--------eEEEECC-CCeEecCCCCC-CCcEEEeE
Confidence 56799999984 357899999999999999998876 9999873 36899999986 67899985
No 163
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet, sugar-binding protein, activator, snake venom; 2.40A {Crotalus durissus terrificus} SCOP: d.169.1.1 PDB: 1uos_B
Probab=98.66 E-value=1.1e-08 Score=94.85 Aligned_cols=61 Identities=21% Similarity=0.599 Sum_probs=52.4
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|+|+||++++|.+|+ +|| +||.|.... ++|+|..|.. .+.|||+.
T Consensus 63 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~-g~P-------~C~~~~~~~-g~w~~~~C~~-~~~fICe~ 123 (125)
T 1umr_C 63 STFFWIGANNI--WNKCNWQWSDGTKPEYKEWH-EEF-------ECLISRTFD-NQWLSAPCSD-TYSFVCKF 123 (125)
T ss_dssp SSEEECSCCCT--TTSSCEEETTSCCCSSCCBC-CCC-------EEEEEESSC-SCEEEEETTS-CEEEEEEE
T ss_pred CCCEEEeeEeC--CCCCeeEeCCcCccCcccCC-CCC-------CcEEEECCC-CcEeCCCCCC-CcceEEee
Confidence 46799999984 35789999999999999999 998 899998653 3799999996 77899986
No 164
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B* 1x2w_B 1wt9_B 1iod_B 1y17_B
Probab=98.66 E-value=1.1e-08 Score=94.39 Aligned_cols=61 Identities=16% Similarity=0.706 Sum_probs=52.4
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|+|+||++++|.+|+ +|| +||.|.... ++|+|..|+. .+.|||+.
T Consensus 61 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~-g~P-------~C~~~~~~~-g~w~~~~C~~-~~~~iCe~ 121 (123)
T 1j34_B 61 HSIFWMGLSNV--WNQCNWQWSNAAMLRYKAWA-EES-------YCVYFKSTN-NKWRSRACRM-MAQFVCEF 121 (123)
T ss_dssp SCEEECSCCSC--STTSCEEETTCCCCCCCCBS-CSC-------EEEEEETTS-CCBEEEETTS-CEEEEEEE
T ss_pred CCCEEEeeEcC--CCCCeeEeCCCCCcCccCcC-CCC-------CcEEEECCC-CCCcCCCCCC-CCcEEEee
Confidence 46799999984 35789999999999999999 998 899998653 3799999986 77899986
No 165
>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=98.66 E-value=5.8e-09 Score=97.99 Aligned_cols=64 Identities=22% Similarity=0.538 Sum_probs=53.9
Q ss_pred ceEEEEeeeCCCCcccc-E-EEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITART-W-KWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~-w-~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..+||||++. ..++. | +|+||++++|.+|++++| ++||.|....+ ++|+|..|.. .+.|||+..
T Consensus 65 ~~~WIGl~~~--~~~~~~w~~W~dG~~~~~~~W~~~~~------~~Cv~~~~~~~~~~W~~~~C~~-~~~fICe~~ 131 (134)
T 3gpr_C 65 LYVWIGLRDR--RKEQQCSSEWSMSASIIYVNWNTGES------QMCQGLARWTGFRKWDYSDCQA-KNPFVCKFS 131 (134)
T ss_dssp CBCCCSCBCC--SSTTSCSCEETTCCCSCCBCBSSCEE------CCEECCBCSSSSCBBCEECTTC-CBCCEEEEC
T ss_pred CcEEEeeEec--CCCCCcCCEeCCcCcccccccCCCCC------CcceEEeccCCCCcCcCCCCCC-CCcEEeCcC
Confidence 5799999984 35789 9 999999999999998875 68999976432 4899999996 789999873
No 166
>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=98.65 E-value=9.3e-09 Score=96.03 Aligned_cols=66 Identities=21% Similarity=0.499 Sum_probs=53.0
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCC-CccccccccccccccceeecC
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGR-GWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~-~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
..|||||++.....++.|+|+||++++|.+|++++| ++||.|.... .++|+|..|.. .+.|||+..
T Consensus 64 ~~~WIGl~~~~~~~~~~~~W~dg~~~~~~~w~~~~~------~~Cv~~~~~~~~~~W~~~~C~~-~~~fiCe~~ 130 (131)
T 3ubu_A 64 DNVWLGLKIQSKGQQCSTEWTDGSSVSYENFSEYQS------KKCFVLEKNTGFRTWLNLNCGS-EYSFVCKSP 130 (131)
T ss_dssp SCEEEEEEEECSSSSSCCBCTTSCBCCCCCBCTTTC------CCEEEECGGGTSCSEEEECTTC-CEEEEEEEC
T ss_pred CCEEEeEecCCCCCCCceEeCCCCccceeccCCCCC------CCcEEEeCCCCCCeEcCCCCCC-CceeEEecC
Confidence 479999998421127899999999999999998775 6899997532 24799999986 678999863
No 167
>3g8k_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.00A {Mus musculus} SCOP: d.169.1.1 PDB: 1qo3_C 3cad_A
Probab=98.65 E-value=1.7e-08 Score=94.20 Aligned_cols=69 Identities=17% Similarity=0.400 Sum_probs=55.2
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCCCCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPANC 280 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~~~C 280 (881)
...|||||++. ..++.|+|+||+++++ +|..++|+. +.++||.|..+ +|+|..|.. .+.|||+.....+
T Consensus 60 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~-~~~~~~~~~--~~~~Cv~~~~~---~w~~~~C~~-~~~fICe~~~~~~ 128 (130)
T 3g8k_A 60 SDSYWIGLSYD--NKKKDWAWINNGPSKL-ALNTMKYNI--RDGGCMLLSKT---RLDNDNCDK-SFICICGKRLDKF 128 (130)
T ss_dssp SSEEEEEEEEE--TTTTEEEEGGGCCCCC-CCCGGGCCG--GGCSEEEEESS---CEEEECTTS-CBEEEEEEETTCC
T ss_pred CCCEEEeeecc--CCCCceEeCCCCccCc-ccccCCCCC--CCCCceEEeCC---eEECCCCCC-CCeEeeeeecCCC
Confidence 46799999984 3578999999999887 687777764 46899999754 699999986 7889998855443
No 168
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=98.64 E-value=2.3e-08 Score=108.88 Aligned_cols=134 Identities=11% Similarity=0.014 Sum_probs=87.3
Q ss_pred CCCceeccCCCC--CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC---CCCCCcccEEE
Q psy11954 25 RRPTNQSSTIRG--APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC---GHQPLQDLEIR 99 (881)
Q Consensus 25 ~k~a~qSS~~~~--~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~---~~~~~~~~~i~ 99 (881)
.+..++||.+.. ..|.+|.+++..+.|... ..+.++|+||||++.+.|..|.+..|.+- ..+....|+|.
T Consensus 20 d~~itASS~~~~~~~~p~~arl~~~~~~W~~~-----~~~~~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~ 94 (325)
T 2qqj_A 20 NEQISASSTYSDGRWTPQQSRLHGDDNGWTPN-----LDSNKEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLE 94 (325)
T ss_dssp GGGEEESCCCTTSSSCGGGCBTTCSSCCBCCS-----SCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEE
T ss_pred ccCEEeccccCCCccCccceeecCCCCccccC-----cCCcCccEEEeccceEEEEEEEeeCCcCCCCCcceeEEEEEEE
Confidence 466789998765 689999999887778543 23468999999999999999999877421 11355677877
Q ss_pred EccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccc
Q psy11954 100 VGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGS 179 (881)
Q Consensus 100 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~ 179 (881)
.+.+.. .|..+.+.. .-..|.+...........+.+++.+|||||....-...
T Consensus 95 ~S~dg~--------------~W~~~~~~~-------------~~~~f~Gn~d~~~~v~~~l~~pi~aRyvRi~p~~~~~~ 147 (325)
T 2qqj_A 95 VSTNGE--------------DWMVYRHGK-------------NHKVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSG 147 (325)
T ss_dssp EESSSS--------------SCEECEETT-------------EECCEECCSSSSCCEEEEEEEEEEEEEEEEEEEEEESS
T ss_pred EEcCCc--------------EeEEeeCCC-------------ccEEEeccCCCCeeEEEecCCceEEEEEeecCcccccc
Confidence 776632 233332211 00112222222222333344579999999998865545
Q ss_pred eEeeEEEeeccc
Q psy11954 180 LSLCEVEIFTTD 191 (881)
Q Consensus 180 l~l~EveV~g~~ 191 (881)
..| +|||||-+
T Consensus 148 ~~~-R~ElyGc~ 158 (325)
T 2qqj_A 148 IAL-RLELFGCR 158 (325)
T ss_dssp CCB-EEEEEEEC
T ss_pred cee-eeeeeeee
Confidence 555 79999975
No 169
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=98.64 E-value=1.2e-07 Score=90.28 Aligned_cols=115 Identities=17% Similarity=0.130 Sum_probs=81.5
Q ss_pred CCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeE--EEEEEEEEccCCCCCCCCcccEEEEccCCCCCCCCCccCC
Q psy11954 38 PSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPY--PIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWF 115 (881)
Q Consensus 38 ~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~--~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~~~~~~~~~ 115 (881)
...+|+||+.+|.|.. ......|.+||||+.. .|.+++.+-|.+ ...++.+.++.++++.+
T Consensus 24 ~~~~~~DGn~~T~f~~------~~~~~~~i~iDLG~~~~~~l~~f~Y~Pr~~-~~~~miGg~fegSnd~D---------- 86 (155)
T 2yfu_A 24 TIHKAFDGDLNTFFDG------PTANGCWLGLDFGEGVRNVITQIKFCPRSG-YEQRMIGGIFQGANKED---------- 86 (155)
T ss_dssp CGGGGGSSCTTCCBCC------SSSSSCEEEEECCTTCCEEEEEEEEECCTT-CGGGGTTCEEEEESSTT----------
T ss_pred hhhheecCCCCcEeEc------CCCCCceEEEECCCCcceEEeeEEEecCcc-cccCCcEEEEEEECCCC----------
Confidence 3568999999987743 3334679999999987 999999999988 45688899999998743
Q ss_pred CCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceEeeEEEeeccc
Q psy11954 116 PGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~l~EveV~g~~ 191 (881)
+..+.+...+...........+....+.+.||||...+.. ....|+||++|+..
T Consensus 87 ---------------------f~~~~tL~~I~~~P~~~~~~~v~~~~~k~yRYiRy~~p~~-~~~niAEi~fy~~~ 140 (155)
T 2yfu_A 87 ---------------------FSDAVTLFTITSLPGSGTLTSVDVDNPTGFRYVRYLSPDG-SNGNIAELQFFGTP 140 (155)
T ss_dssp ---------------------CTTCEEEEECCSCCCTTSCEEEECCCCCEESEEEEECCTT-STTCBSEEEEEEEE
T ss_pred ---------------------CCCeEEEEEecCCCcccccEEEECCCCCcEEEEEEEcCCC-CeEEEEEEEEEecc
Confidence 1222223333321111122444555567899999998864 47899999999774
No 170
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB: 2vrp_B
Probab=98.63 E-value=1.4e-08 Score=96.87 Aligned_cols=61 Identities=25% Similarity=0.724 Sum_probs=52.7
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|+|+||++++|++|+ +|| +||.|.... ++|+|..|+. .+.|||+.
T Consensus 84 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~-g~P-------~C~~~~~~~-g~w~~~~C~~-~~~~ICe~ 144 (146)
T 3bx4_B 84 ANLVWMGLSNI--WHGCNWQWSDGARLNYKDWQ-EQS-------ECLAFRGVH-TEWLNMDCSS-TCSFVCKF 144 (146)
T ss_dssp TSEEECSCCCT--TSSSCEEETTCCCCCSCCBC-SCC-------EEEEEETTC-CCEEEEETTS-CEEEEEEE
T ss_pred CCCEEEecccC--CCCCceEeCCCCcccccCcC-CCC-------CceEEECCC-CeEecCCCCC-CcceEEee
Confidence 56799999984 35789999999999999999 998 899998753 3799999986 67899986
No 171
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=98.63 E-value=3.5e-09 Score=128.23 Aligned_cols=133 Identities=16% Similarity=0.170 Sum_probs=0.0
Q ss_pred CCCceeccCCC------CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC--CCCCCCccc
Q psy11954 25 RRPTNQSSTIR------GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC--CGHQPLQDL 96 (881)
Q Consensus 25 ~k~a~qSS~~~------~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d--~~~~~~~~~ 96 (881)
|.++++||... .+.|.+|+||+.++.|.+.++..+......|++|||++.+.|..|.+..|.+ -....+..+
T Consensus 1226 GwtATASSee~~~g~~geg~A~nAIDGD~~T~WHSaWs~ss~~~PgqWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksY 1305 (1376)
T 2zxq_A 1226 GYTVATGSEEPTAGLPSEGPADLAQDGNDSTHWHTSWSENAVGNGTAWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGY 1305 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEccccccccCCCCCCHHHcCcCCCCCeEEecccccCCCCCceEEEEEcCCcEEEEEEEEecCccCCCCCCceEEE
Confidence 35888888754 2468999999999999876654322212379999999999999999998864 223467788
Q ss_pred EEEEcc-CCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec
Q psy11954 97 EIRVGN-STDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG 175 (881)
Q Consensus 97 ~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g 175 (881)
+|.++. +.. .|+++.+- .+. ..+....+.+.+++.+|||||....
T Consensus 1306 kIeVS~dDG~--------------nWttVa~G-----------------TFs---gn~t~kti~Fd~PVkARYVRf~ats 1351 (1376)
T 2zxq_A 1306 KITLTLADGT--------------TKDVVTDA-----------------EFS---TTTMWQKASFDAVENVTAVRLTVLS 1351 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEECCCCC--------------eEEEEEee-----------------EEc---CCCceEEEEeCCCceEEEEEEEEEE
Confidence 888887 422 12222100 111 1123445666667899999999974
Q ss_pred Ccc--------ceEeeEEEeeccc
Q psy11954 176 VEG--------SLSLCEVEIFTTD 191 (881)
Q Consensus 176 ~~~--------~l~l~EveV~g~~ 191 (881)
... +.+|+||+||+.+
T Consensus 1352 ~~gg~g~~~Nk~aSIAEf~Vyg~k 1375 (1376)
T 2zxq_A 1352 SAGQSDSQANKFASAAELRLTTDR 1375 (1376)
T ss_dssp ------------------------
T ss_pred ccCCCCccccceEEEEEEEEeccC
Confidence 321 6899999999864
No 172
>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane protein; 2.50A {Trimeresurus flavoviridis} SCOP: d.169.1.1 PDB: 1v4l_B
Probab=98.62 E-value=1.6e-08 Score=93.59 Aligned_cols=61 Identities=23% Similarity=0.535 Sum_probs=52.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++. ..++.|.|+||++++|.+|+ +|| +||.|.... ++|+|..|.. .+.|||+.
T Consensus 63 ~~~~WIGl~~~--~~~~~~~W~dg~~~~~~~w~-~~P-------~C~~~~~~~-g~w~~~~C~~-~~~fiCe~ 123 (125)
T 1c3a_B 63 YDFVWIGLSNV--WNECTKEWSDGTKLDYKAWS-GGS-------DCIVSKTTD-NQWLSMDCSS-KYYVVCKF 123 (125)
T ss_dssp SCEEECSCCCT--TTSSCEEETTCCCCCSCCBC-CCC-------EEEEEESSS-SCEEEEETTS-CEEEEEEE
T ss_pred CCCEEEeeEcC--CCCCceEeCCCCcccccccC-CCC-------CcEEEECCC-CCEeCCCCCC-CCeeEEee
Confidence 46799999984 35789999999999999999 998 899997643 3799999986 77899986
No 173
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin, dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding; 1.91A {Deinagkistrodon acutus}
Probab=98.61 E-value=3.7e-08 Score=91.27 Aligned_cols=61 Identities=21% Similarity=0.588 Sum_probs=52.2
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..+||||++. ..++.|+|+||++++|.+|++ .++||.|.....++|+|..|.. .+.|||+.
T Consensus 64 ~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~--------~~~Cv~~~~~~~~~W~~~~C~~-~~~fICe~ 124 (126)
T 3ubu_B 64 SLIWMGLSNM--WNDCKREWSDGTKLDFKSWAK--------TSDCLIGKTDGDNQWLNMDCSK-KHYFVCKF 124 (126)
T ss_dssp CEEEEEEECT--TTSSEEEETTCCCCCCCCBCC--------CCCEEEEESSTTCCEEEECTTS-CEEEEEEE
T ss_pred CcEEEeEEcC--CCCCceEecCCCeeeeeccCC--------CCCeEEEecCCCCcCcCCCCCC-CceeEEee
Confidence 4799999984 357899999999999999985 5799999875446899999986 67899985
No 174
>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin; 1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB: 3gpr_B
Probab=98.59 E-value=1.6e-08 Score=94.23 Aligned_cols=61 Identities=21% Similarity=0.502 Sum_probs=51.9
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...+||||+ ++.|.|+||++++|++|+++||+ +||.|....+ ++|+|..|.. .+.|||+..
T Consensus 65 ~~~~WiGl~------~~~~~W~dg~~~~~~~W~~~~P~------~C~~~~~~~~~~~W~~~~C~~-~~~fICe~~ 126 (129)
T 1sb2_B 65 RYRAWTGLT------ERNLKWTNGASVSYENLYEPYIR------KCFVVQPWEGKSKWYKADCEE-KNAFLCKFP 126 (129)
T ss_dssp CCCEEEEEE------ECCCBCTTSCBCCSCCBSSCCCC------CEEEEEEETTEEEEEEECTTS-CEEEEEEEE
T ss_pred CCCEeEeec------CCccEECCCCcccccccCCCCCC------CeEEEEecCCCCeEeCcCCCC-CcceEeccc
Confidence 457999998 35899999999999999999997 8999976433 4799999986 678999874
No 175
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=98.57 E-value=1.4e-07 Score=107.61 Aligned_cols=137 Identities=15% Similarity=0.081 Sum_probs=89.5
Q ss_pred cccCCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCcccEE
Q psy11954 21 NVALRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDLEI 98 (881)
Q Consensus 21 nlA~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~~i 98 (881)
.++..+..++||... ...|.+|.|++..+.|... .....+.++|+|||||+.+.|..|.+..|.+- ..+....|+|
T Consensus 304 g~i~d~~itASS~~~~~~~p~~arl~~~~~~W~~~--~~~~~~~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v~~Y~i 381 (450)
T 2qqm_A 304 GLISDSQITSSNQGDRNWMPENIRLVTSRSGWALP--PAPHSYINEWLQIDLGEEKIVRGIIIQGGKHRENKVFMRKFKI 381 (450)
T ss_dssp SCSCGGGEEETTTTSTTCCGGGGBTTTCSSCEEEC--CCSSCCCSCCEEEEEEEEEEEEEEEEECCSCTTTCCCEEEEEE
T ss_pred CCccccccccccccccccCchhhhccccCCccccc--ccccCCcCceEEEeCCCcEEEEEEEecCccCCCCcEEEEEEEE
Confidence 455577888999865 4679999999887777411 01124568999999999999999999987532 1256778888
Q ss_pred EEccCCCCCCCCCccCCCCCCCCCCCccc-----ceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEE
Q psy11954 99 RVGNSTDLQKNPLCAWFPGTLGHQPLQDL-----EIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQL 173 (881)
Q Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~ 173 (881)
.++.+.. .|.++.+. +++.|| ..........+ +++.||||||..
T Consensus 382 ~~S~dg~--------------~W~~~~~~~~~~~~~F~GN----------------~d~~~~~~~~~-~pi~aRyVRi~p 430 (450)
T 2qqm_A 382 GYSNNGS--------------DWKMIMDDSKRKAKSFEGN----------------NNYDTPELRTF-PALSTRFIRIYP 430 (450)
T ss_dssp EEESSSS--------------SCEECBCTTSSSBCCEECC----------------SSSSSCEEEEE-EEEEEEEEEEEE
T ss_pred EEECCCC--------------cEEEEEcCCCCcccEecCc----------------CCCCceEEccC-CCeEEEEEEEEE
Confidence 8887733 34444321 222222 11111222233 379999999998
Q ss_pred ec-CccceEeeEEEeeccc
Q psy11954 174 VG-VEGSLSLCEVEIFTTD 191 (881)
Q Consensus 174 ~g-~~~~l~l~EveV~g~~ 191 (881)
.. ..+.+.| +|||||-+
T Consensus 431 ~~~~~~~i~l-R~ElyGc~ 448 (450)
T 2qqm_A 431 ERATHGGLGL-RMELLGCE 448 (450)
T ss_dssp EEEBTTBEEE-EEEEEEEC
T ss_pred eeccCCCeEE-EEEEEccc
Confidence 74 3445555 89999853
No 176
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB: 1uex_A
Probab=98.57 E-value=2.1e-08 Score=93.64 Aligned_cols=61 Identities=26% Similarity=0.555 Sum_probs=51.2
Q ss_pred eEEEEee--eCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeecC
Q psy11954 205 LVWIGAQ--KDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 205 ~~WiGl~--~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~~ 276 (881)
.|||||+ +. ..++.|+|+||++++|.+|+ ||+ +||.|..... ++|+|..|.. .+.|||+..
T Consensus 65 ~~WIGl~~~~~--~~~~~~~W~dg~~~~~~~W~--~P~------~C~~~~~~~~~~~w~~~~C~~-~~~fICe~~ 128 (131)
T 1jwi_A 65 DAWIGLRDESK--TQQCSPQWTDGSSVVYENVD--EPT------KCFGLDVHTEYRTWTDLPCGE-KNPFICKSR 128 (131)
T ss_dssp CEEEEEEECCS--SSSSCSBCTTSCBCCSCCBS--SCC------CEEEECGGGTTSSEEEECTTS-CEEEEEEC-
T ss_pred cEEEeeeecCC--CCCCceEEeCcCcccCcCCC--CCC------CceEEecCCCCCeEcCcCCCC-CcceeeCcC
Confidence 7999999 63 35789999999999999998 886 8999976432 6899999986 678999873
No 177
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=98.56 E-value=2.1e-07 Score=88.67 Aligned_cols=130 Identities=14% Similarity=0.044 Sum_probs=84.3
Q ss_pred cccccCCC---CceeccCC-CCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCc
Q psy11954 19 GTNVALRR---PTNQSSTI-RGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQ 94 (881)
Q Consensus 19 ~~nlA~~k---~a~qSS~~-~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~ 94 (881)
..|+|+.+ .+.++|.. ..+.|.+|+||+.++.|.. ....++|..|||++...|++|+|.-+ +..
T Consensus 13 ~~~~~~~~~g~~v~~ass~~~~~~~~~~iDgn~~T~W~t------~g~~Pq~i~Idf~k~~~is~~~i~~~------~vk 80 (153)
T 1tvg_A 13 KIDLCLSSEGSEVILATSSDEKHPPENIIDGNPETFWTT------TGMFPQEFIICFHKHVRIERLVIQSY------FVQ 80 (153)
T ss_dssp -CBTTCGGGTCEEECCSCCCTTSCGGGGGSSCTTCCEEC------CSCSSEEEEEEEEEEEEEEEEEEEEE------SEE
T ss_pred ccccccccCCcEEEEecccCcccCHHHcCcCCCCceEEC------CCCCCcEEEEECCCceEEEEEEEEec------CCE
Confidence 35777744 44444443 3567899999999998842 23468899999999999999999854 467
Q ss_pred ccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEe
Q psy11954 95 DLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLV 174 (881)
Q Consensus 95 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~ 174 (881)
.++|.++.+.... .|+.+ +...-....|....+..+.++.+|||||.+.
T Consensus 81 ~~~ie~s~d~~p~------------~w~~i-------------------~e~ef~~~~n~~Q~~~~~~~~~a~~lRl~i~ 129 (153)
T 1tvg_A 81 TLKIEKSTSKEPV------------DFEQW-------------------IEKDLVHTEGQLQNEEIVAHGSATYLRFIIV 129 (153)
T ss_dssp EEEEEEECSSSSC------------CCEEE-------------------EEEECCCCTTCCEEEEECCCEEEEEEEEEEE
T ss_pred EEEEEEECCCCCc------------ceEEe-------------------EEEEecCCCCcEEEEEcCCCceeEEEEEEEE
Confidence 7777776552100 11111 1110001112233344433578999999999
Q ss_pred -cCccceEeeEEEeeccc
Q psy11954 175 -GVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 175 -g~~~~l~l~EveV~g~~ 191 (881)
+...+..|.||+|+|.+
T Consensus 130 s~~d~fv~Iy~l~v~G~~ 147 (153)
T 1tvg_A 130 SAFDHFASVHSVSAEGTV 147 (153)
T ss_dssp EESSSCCEEEEEEEEEEE
T ss_pred cccccEEEEEEEEEEEEE
Confidence 44447899999999975
No 178
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=98.55 E-value=1.9e-07 Score=91.08 Aligned_cols=118 Identities=8% Similarity=0.021 Sum_probs=76.4
Q ss_pred CCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCC----CCCCcccEEEEccCCCCCCCCCcc
Q psy11954 38 PSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCG----HQPLQDLEIRVGNSTDLQKNPLCA 113 (881)
Q Consensus 38 ~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~----~~~~~~~~i~v~~~~~~~~~~~~~ 113 (881)
.+.+|+||+.++.|...+ ........|..||||+.++|++++|+-|.+-. .-....++|.++++..
T Consensus 40 ~~~~liDgn~~T~Wht~w--~~~~~~P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g~ik~~~I~~S~Dg~-------- 109 (172)
T 3hnm_A 40 GVESLIDNNPGTQWLCRW--DVKEPLPYYFVFDMGKEYTLFRFGFANPVAPAAHVWAGTSKAGYVEASIDNE-------- 109 (172)
T ss_dssp SGGGGSSSCTTSCEECCC--SSCCCSCEEEEEEEEEEEEEEEEEEECCCSSCTTSTTCCEEEEEEEEESSSS--------
T ss_pred cHHHcCCCCCCCeEEecC--CCCCCCCEEEEEECCCceEEeEEEEEecCCCCcccCCCCeEEEEEEEEeCCC--------
Confidence 688999999998885421 11234667999999999999999999997532 2356678888877632
Q ss_pred CCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc-----cceEeeEEEee
Q psy11954 114 WFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE-----GSLSLCEVEIF 188 (881)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~-----~~l~l~EveV~ 188 (881)
.|+.|.+.+. .........+.. .++++|||||.++... -..+|+||-.+
T Consensus 110 ------~W~~v~~~~~-------------------~~~~~~~~~~~~-~~~~aRYIR~~v~~g~~~~~~~rv~~~e~~~~ 163 (172)
T 3hnm_A 110 ------NWVKLKDWTS-------------------PKIGEPNVNMDV-PATQARYIRFVITDTYPTYDGLRVSLGEVYAW 163 (172)
T ss_dssp ------CEEEEECCBC-------------------SSTTCSCEEEEE-EEEEEEEEEEEEEEECCCTTSSCCEECEEEEE
T ss_pred ------CeEEeEEEEe-------------------cCCCCceEEeec-CCCceEEEEEEEccCcccccceEEEhhHhhhh
Confidence 2222221110 000122233333 3678999999998422 13588888887
Q ss_pred ccc
Q psy11954 189 TTD 191 (881)
Q Consensus 189 g~~ 191 (881)
|.+
T Consensus 164 ~~~ 166 (172)
T 3hnm_A 164 GLE 166 (172)
T ss_dssp EEE
T ss_pred hhh
Confidence 754
No 179
>3ff7_C Killer cell lectin-like receptor subfamily G member 1; KLRG1-cadherin complex, calcium, cell adhesion, cell junction, cell membrane; 1.80A {Homo sapiens} SCOP: d.169.1.0
Probab=98.55 E-value=6.1e-08 Score=87.90 Aligned_cols=59 Identities=24% Similarity=0.676 Sum_probs=48.9
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...+||||++ ++.|+|+||++++|.+|.++ + ..++||.|..+ .|+|..|+. .+.|||+.
T Consensus 54 ~~~~WiGl~~-----~~~~~W~dg~~~~~~~w~~~---~--~~~~C~~~~~~---~w~~~~C~~-~~~fICek 112 (112)
T 3ff7_C 54 EAFSWIGLRN-----NSGWRWEDGSPLNFSRISSN---S--FVQTCGAINKN---GLQASSCEV-PLHWVCKK 112 (112)
T ss_dssp SSCEEEEEEE-----SSSEEETTSCBCCSSCEECS---S--TTCCEEEEETT---EEEEECTTS-CBEEEEEC
T ss_pred CCCEEEeeec-----CCceEeCCCCccccceecCC---C--CCCCCeEEeCC---CcccCCCCC-CCceeecC
Confidence 4579999997 36899999999999999743 2 36899999864 499999986 78899974
No 180
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=98.51 E-value=2.7e-07 Score=91.96 Aligned_cols=134 Identities=11% Similarity=0.140 Sum_probs=80.5
Q ss_pred cccccCCCCceeccCCCC--CCCCCCcCCCCCC-CcCCCceec---cCCCCCCcEEEEcCCeEEEEEE-EEEccCCCC-C
Q psy11954 19 GTNVALRRPTNQSSTIRG--APSSNANDGELTT-VHDGKRCTE---TQKEVSPWWQVDLLRPYPIRIV-RITTRGCCG-H 90 (881)
Q Consensus 19 ~~nlA~~k~a~qSS~~~~--~~a~~AvDG~~~~-~~~~~~c~~---t~~~~~pWw~VDLg~~~~i~~V-~i~nr~d~~-~ 90 (881)
..+.++.+.+..+|.+.. ...++++||+..+ .| |+. ...+..+|+|||||+++.|..| .+..|.+-. .
T Consensus 18 ~~~~~~~assi~ss~w~~~~p~~arL~dg~~~t~aW----~a~~~~~~~~~~qwLQVDLg~~~~VtgV~~tQG~~~~~~~ 93 (192)
T 2w1s_A 18 GSHMASNPSLIRSESWQVYEGNEANLLDGDDNTGVW----YKTLNGDTSLAGEFIGLDLGKEIKLDGIRFVIGKNGGGSS 93 (192)
T ss_dssp ------CCEEEECTTCEEEEECGGGGSSSCTTCCEE----EECHHHHCBCTTCEEEEEEEEEEEEEEEEEEECCSSTTTT
T ss_pred CccccccceEEecccccccCChHHheeCCCCCcCEE----eCCcccccCCCCceEEEECCCeEEEEEEEEEcCCCCCCCC
Confidence 467888877777765432 3568999998654 55 442 2346789999999999999999 555554311 2
Q ss_pred CCCcccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEE
Q psy11954 91 QPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVF 170 (881)
Q Consensus 91 ~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~ 170 (881)
+....|+|..+.+.. .|+++.+... .+...........+.+|+.+||||
T Consensus 94 ~~vt~Y~l~yS~DG~--------------~W~~~~~~~~-----------------~GN~d~~t~v~~~f~~pi~ARYVR 142 (192)
T 2w1s_A 94 DKWNKFKLEYSLDNE--------------SWTTIKEYDK-----------------TGAPAGKDVIEESFETPISAKYIR 142 (192)
T ss_dssp CCCSEEEEEEESSSS--------------SCEEEEEEEC-----------------TTCCSSCEEEEEEEEEEEEEEEEE
T ss_pred CeEEEEEEEEEcCCC--------------CeEEEecCCc-----------------cCCcCCCcEEEEecCCCceEEEEE
Confidence 456778887776622 2333321110 111111122334444579999999
Q ss_pred EEEecC-ccceEeeEEEe
Q psy11954 171 IQLVGV-EGSLSLCEVEI 187 (881)
Q Consensus 171 i~~~g~-~~~l~l~EveV 187 (881)
|..... ..+..+.|++|
T Consensus 143 i~p~~~~~~w~~~~elRV 160 (192)
T 2w1s_A 143 LTNMENINKWLTFSEFAI 160 (192)
T ss_dssp EEECSCBSCCEEEEEEEE
T ss_pred EEEeeCCCccceEEEEEE
Confidence 998752 33778999998
No 181
>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells, receptor, glycoprotein, lectin, signal-A transmembrane, immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K 3cii_H
Probab=98.47 E-value=1.3e-07 Score=86.84 Aligned_cols=61 Identities=23% Similarity=0.488 Sum_probs=47.7
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
..|||||++. ..++.|.|+||++++|.+| +|++ ..++||.|... .|+|..|.. .+.|||+.
T Consensus 59 ~~~WIGl~~~--~~~~~w~W~dg~~~~~~~~---~p~~--~~~~C~~~~~~---~w~~~~C~~-~~~fICe~ 119 (120)
T 3bdw_B 59 PSSWIGVFRN--SSHHPWVTMNGLAFKHEIK---DSDN--AELNCAVLQVN---RLKSAQCGS-SIIYHCKH 119 (120)
T ss_dssp SEEEEEEECS--STTSCCEETTSSBCCSCCC---------CCCCEEEEESS---SEEEECTTS-CEEEEEEC
T ss_pred CCEeEEEEec--CCCCceEeCCCCccCccCc---CCCC--CCCCccEEeCC---ceECCCCCC-Ccceeeee
Confidence 5799999984 3578999999999998875 5765 46899999765 399999986 67899985
No 182
>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand of NK receptor, natural killer CE receptors, surface of activated T lymphocytes; 1.94A {Mus musculus}
Probab=98.46 E-value=1.4e-07 Score=86.99 Aligned_cols=60 Identities=18% Similarity=0.424 Sum_probs=50.2
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|+|+||++++|.+|.. +.++||.|... .|+|..|.. .+.|||+.
T Consensus 61 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~w~~-------~~~~C~~~~~~---~w~~~~C~~-~~~fICek 120 (122)
T 3rs1_A 61 DFDSWIGLHRE--SSEHPWKWTNNTEYNNMNPIL-------GVGRYAYLSSD---RISSSRSYI-NRMWICSK 120 (122)
T ss_dssp TSCEEEEEECS--STTSCCEETTCCBCCCCSCCC-------SSCSEEEEETT---EEEEECSCS-CBCBEEEE
T ss_pred CCCEEEEEEec--CCCCceECCCCCcCCccccCC-------CCCceEEEeCC---cEeccccCC-CCCeeeec
Confidence 45799999984 358899999999999999942 35799999865 599999987 67899985
No 183
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=98.44 E-value=5.4e-07 Score=98.04 Aligned_cols=138 Identities=14% Similarity=0.088 Sum_probs=85.3
Q ss_pred CCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC-------CCCCCCcc
Q psy11954 24 LRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC-------CGHQPLQD 95 (881)
Q Consensus 24 ~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d-------~~~~~~~~ 95 (881)
..++.++||... ...|.+|.+++..+.|... .....+.++|+|||||..+.|..|.+..|.+ -..+....
T Consensus 176 ~d~~itASS~~~~~~~p~~arL~~~~~~W~~~--~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~vt~ 253 (325)
T 2qqj_A 176 ADSQISASSTQEYLWSPSAARLVSSRSGWFPR--IPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRK 253 (325)
T ss_dssp CGGGEEESCCCC-CCCGGGGBTTTCSSCBCCS--SSSCCTTTCCEEEEEEEEEEEEEEEEECBCCC----CCCCCBCEEE
T ss_pred CCcccccccccCcccCcchhhhccCCCccccc--cccCCCccceeEeccCCceeEEEEEecCCCCCCCccccCcceeEEE
Confidence 357788998875 4678999998877777543 1123467899999999999999999987752 12245667
Q ss_pred cEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec
Q psy11954 96 LEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG 175 (881)
Q Consensus 96 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g 175 (881)
|+|..+++.. .|..+.+.. .+ ....|.+...........+. |+.||||||....
T Consensus 254 Y~l~yS~dg~--------------~W~~~~~~~----------~~-~~~vF~GN~d~~t~v~~~l~-pi~ARyVRi~p~~ 307 (325)
T 2qqj_A 254 FKVSYSLNGK--------------DWEYIQDPR----------TQ-QPKLFEGNMHYDTPDIRRFD-PIPAQYVRVYPER 307 (325)
T ss_dssp EEEEEESSSS--------------SCEECEETT----------TT-EECCEECCSSSSSCEEEEEE-EEEEEEEEEEEEE
T ss_pred EEEEEEeCCC--------------CeEEEecCC----------CC-ccceeecccCCCCeEEeecC-CEEEEEEEEEeee
Confidence 8887776632 344443221 00 00112221111111222233 6999999999885
Q ss_pred Cc-cceEeeEEEeecc
Q psy11954 176 VE-GSLSLCEVEIFTT 190 (881)
Q Consensus 176 ~~-~~l~l~EveV~g~ 190 (881)
-. ..+.| +|||||-
T Consensus 308 w~~~~i~m-R~El~Gc 322 (325)
T 2qqj_A 308 WSPAGIGM-RLEVLGC 322 (325)
T ss_dssp ECTTCCCB-EEEEEEE
T ss_pred eecCCeEE-EEEEeee
Confidence 43 23344 6999984
No 184
>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin, cell adhesion; 3.20A {Calloselasma rhodostoma}
Probab=98.43 E-value=3.7e-08 Score=91.06 Aligned_cols=61 Identities=21% Similarity=0.675 Sum_probs=51.1
Q ss_pred ceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCC-ccccccccccccccceeec
Q psy11954 204 LLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 204 ~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~-~~Wnd~~C~~~~~~~iC~~ 275 (881)
..+||||++. ..++.|.|+||++++|.+|++ +| +||.|..... ++|+|..|.. .+.|||+.
T Consensus 61 ~~~WIGl~~~--~~~~~~~W~dg~~~~~~~W~~-~p-------~C~~~~~~~~~~~W~~~~C~~-~~~fiCe~ 122 (124)
T 3gpr_D 61 TSMWLGLNNA--WAACKWEWSDDAKLDYKVWLR-RA-------YCAVMVVKTDRIFWYNRGCEK-TVSFLCKF 122 (124)
T ss_dssp CCBCCSEECC--SSCSSCSSSSCCCSCCBCCCS-CC-------CEECCBCCSSSCBBCEECTTS-EEEEEEEE
T ss_pred CCEEEEeEcC--CCCCceEECCCCcccccccCC-CC-------CcEEEEcCCCCCcEeCCCCCC-CccEEeee
Confidence 5799999984 357899999999999999987 43 8999976433 5899999986 78899985
No 185
>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo sapiens}
Probab=98.43 E-value=8.9e-08 Score=87.66 Aligned_cols=62 Identities=18% Similarity=0.452 Sum_probs=49.7
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. ..++.|.|+||+++ .+|..++|+ +++||.|... ++|+|..|.. .+.|||+.
T Consensus 55 ~~~~WIGl~~~--~~~~~w~W~dg~~~--~~~~~~~~~----~~~C~~~~~~--~~w~~~~C~~-~~~fICe~ 116 (118)
T 2yhf_A 55 AEKYFIGLIYH--REEKRWRWINNSVF--NGNVTNQNQ----NFNCATIGLT--KTFDAASCDI-SYRRICEK 116 (118)
T ss_dssp SSCEEEEEEEE--TTTTEEEETTTEEC--CSCEESCCT----TCCEEEESSS--SSEEEECTTS-CBEEEEEE
T ss_pred CCcEEEecccc--CCCCcEEEeCCCcC--CCCccCCCC----CCCeeEEcCC--CcCccccCCC-Cceeeecc
Confidence 45799999874 35789999999985 478776664 5899999753 4699999987 67899986
No 186
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=98.41 E-value=3.2e-08 Score=116.71 Aligned_cols=83 Identities=12% Similarity=0.138 Sum_probs=0.0
Q ss_pred ccCcccccccCCCCceeccCCC---CCCCCCCcCCCCC---CCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC
Q psy11954 14 IHFISGTNVALRRPTNQSSTIR---GAPSSNANDGELT---TVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC 87 (881)
Q Consensus 14 ~~~~~~~nlA~~k~a~qSS~~~---~~~a~~AvDG~~~---~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d 87 (881)
+|-....||||+|+|++||.+. ...|.+||||+.+ ++| |+. ..+.|.+||||+.+.|++.+|.+...
T Consensus 794 ~~~~~~~NLAl~k~ataSs~~~~~~~e~p~kaVDG~~~~~stKW----cs~---~~~~wl~vDLg~~~tI~~~vv~haga 866 (937)
T 3gdb_A 794 LPKPLAENIVPGATVIDSTFPKTEGGEGIEGMLNGTITSLSDKW----SSA---QLSGSVDIRLTKSRTVVRWVMDHAGA 866 (937)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCccccccCCCceEEecccccccccCHHHhcCCcccCCCCcc----ccC---CCCceEEEECCCcEEEeEEEEEeccc
Confidence 3444578999999999999763 2479999999987 456 543 25679999999999999999997632
Q ss_pred CCC------CCCcccEEEEccC
Q psy11954 88 CGH------QPLQDLEIRVGNS 103 (881)
Q Consensus 88 ~~~------~~~~~~~i~v~~~ 103 (881)
-.+ ...+.|.|+++++
T Consensus 867 ggE~~~~~~~NT~dF~Lq~s~d 888 (937)
T 3gdb_A 867 GGESVNDGLMNTKDFDLYYKDA 888 (937)
T ss_dssp ----------------------
T ss_pred CccccccccccccceEEEEecC
Confidence 111 1335788888865
No 187
>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural killer cell receptor KLTG1, glycoprotein, membrane, phosphoprotein, signal-anchor; 1.80A {Mus musculus} SCOP: d.169.1.0 PDB: 3ff8_C
Probab=98.39 E-value=3.1e-07 Score=83.58 Aligned_cols=59 Identities=24% Similarity=0.606 Sum_probs=47.7
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++ ++.|+|+||+++++ +| +|++ +.++||.|... .|+|..|.. .+.|||+..
T Consensus 55 ~~~~WIGl~~-----~~~w~W~dg~~~~~-~~---~p~~--~~~~C~~~~~~---~w~~~~C~~-~~~fICe~~ 113 (115)
T 3ff9_A 55 QDFYWIGLRN-----IDGWRWEGGPALSL-RI---LTNS--LIQRCGAIHRN---GLQASSCEV-ALQWICKKV 113 (115)
T ss_dssp SSCEEEEEEE-----SSSEEETTSCBCCS-CC---BCSS--TTCCEEEEETT---EEEEECTTS-CBEEEEEEE
T ss_pred CCcEEEeeee-----CCceEeCCCCcccc-cc---cCCC--CCCCCeEEcCC---CcccccCCC-CCceEEEEe
Confidence 4579999997 36899999999988 44 4554 46899999864 499999987 788999863
No 188
>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system; 2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D 1ja3_A 1p1z_D
Probab=98.37 E-value=1e-07 Score=96.29 Aligned_cols=66 Identities=23% Similarity=0.468 Sum_probs=54.9
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNP 277 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~ 277 (881)
...|||||++. ..++.|.|+||+++.+ +|+.++|+. +.++||.|..+ .|+|..|.. .+.|||+...
T Consensus 133 ~~~~WIGl~~~--~~~~~w~W~DGs~~~~-~w~~~~pn~--~~~~Cv~l~~~---~W~d~~C~~-~~~fICe~~~ 198 (203)
T 3c8j_A 133 PGNYWIGLSYD--KKKKEWAWIDNGPSKL-DMKIKKMNF--KSRGCVFLSKA---RIEDIDCNI-PYYCICGKKL 198 (203)
T ss_dssp SSCEEEEEEEE--TTTTEEEETTSCCCTT-HHHHHTTCC--CSSSEEEECSS---CEEEECTTS-CEEEEEEEEC
T ss_pred CCCEEEeeeec--CCCCceEECCCCCCCC-CCCCCCCCC--CCCCcEEEECC---cEECcCCCC-CEEEEEeECC
Confidence 46799999984 3578999999999886 899999974 57899999754 599999987 6789998743
No 189
>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide bond, glycoprotein, LEC membrane, phosphoprotein, signal-anchor, transmembrane; 1.37A {Homo sapiens} SCOP: d.169.1.1 PDB: 1e87_A 1e8i_A 3cck_A
Probab=98.34 E-value=4.4e-07 Score=84.60 Aligned_cols=59 Identities=29% Similarity=0.759 Sum_probs=48.0
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeec
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQH 275 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~ 275 (881)
...|||||++. .++.|.|+||++ |.+|+. ..+.++||.|..+ +|+|..|.. .+.|||+.
T Consensus 69 ~~~~WIGl~~~---~~~~w~W~dg~~--~~~w~~-----~~~~~~Cv~~~~~---~w~~~~C~~-~~~fICe~ 127 (130)
T 3hup_A 69 REEHWVGLKKE---PGHPWKWSNGKE--FNNWFN-----VTGSDKCVFLKNT---EVSSMECEK-NLYWICNK 127 (130)
T ss_dssp TSCEEEEEEEC---TTSCEEETTSCB--CCCCSC-----CCSSCSEEEEETT---EEEEECTTS-CBEEEEEE
T ss_pred CCCEEEEEEeC---CCCeEEeCCCCc--ccCccC-----CCCCCCceEEeCC---CcccCCCCC-CccEEecc
Confidence 45799999983 468999999997 779982 2346899999864 599999986 67899986
No 190
>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell receptor, immune system; 2.50A {Mus musculus}
Probab=98.32 E-value=3.2e-07 Score=91.69 Aligned_cols=66 Identities=18% Similarity=0.393 Sum_probs=52.9
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNP 277 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~ 277 (881)
...|||||++. ..++.|+|+||+++++.+|..+. + .+.++||.|..+ +|+|..|.. .+.|||+...
T Consensus 120 ~~~~WIGl~~~--~~~~~w~W~DGs~~~~~~~~~~~-~--~~~~~Cv~l~~~---~W~d~~C~~-~~~fICek~~ 185 (190)
T 3g8l_A 120 SDSYWIGLSYD--NKKKDWAWINNGPSKLALNTMKY-N--IRDGGCMLLSKT---RLDNDNCDK-SFICICGKRL 185 (190)
T ss_dssp SSCEEEEEEEE--TTTTEEEETTTBCCCCCCCGGGC-C--GGGCSEEEECSS---CEEEECTTS-CEEEEEEEEC
T ss_pred cCCEEEEEEcC--CCCCceEeCCCCcccccccCCCC-C--CCCCCeEEEeCC---cEECCCCCC-CeeEEEeeCC
Confidence 46799999984 35789999999999999997542 2 246899999653 699999987 6889998744
No 191
>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type lectin-like domain, domain swapping, disulfide bond, transmembrane protein; 1.70A {Mus musculus} SCOP: d.169.1.0 PDB: 3t3a_A
Probab=98.27 E-value=1.8e-07 Score=88.28 Aligned_cols=66 Identities=21% Similarity=0.540 Sum_probs=52.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecCC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNP 277 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~~ 277 (881)
...|||||++. ..++.|+|+||+++++.+|....+. ++++||.|..+ +|+|..|.. .+.|||+...
T Consensus 61 ~~~~WIGl~~~--~~~~~w~W~dg~~~~~~~~~~~~~~---~~~~Cv~~~~~---~w~~~~C~~-~~~fICe~~~ 126 (139)
T 3m9z_A 61 YNSFWIGLRYT--LPDMNWKWINGSTLNSDVLKITGDT---ENDSCAAISGD---KVTFESCNS-DNRWICQKEL 126 (139)
T ss_dssp SSCEEEEEEEE--CCCCCCBCTTSCBCCHHHHTTSSCT---TCEEEEEEETT---EEEEEETTS-CBEEEEEEEC
T ss_pred CccEEEEEecc--CCCCCeEeCCCCcCCcCccccCCCC---CCCCeeEEeCC---cEEeCCCCC-CCceEeeecC
Confidence 35799999984 3578999999999998877644332 25899999753 799999987 7889998744
No 192
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=98.21 E-value=3e-06 Score=96.78 Aligned_cols=134 Identities=16% Similarity=0.103 Sum_probs=85.5
Q ss_pred CCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC-------CCCCCCcc
Q psy11954 24 LRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC-------CGHQPLQD 95 (881)
Q Consensus 24 ~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d-------~~~~~~~~ 95 (881)
..++.++||... ...|.+|.+++..+.|... .....+.++|+|||||+.+.|..|.+..|.+ -..+....
T Consensus 305 ~d~~itASS~~~~~~~p~~arl~~~~~~W~~~--~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~ 382 (460)
T 2qqo_A 305 ADSQISASSTQEYLWSPSAARLVSSRSGWFPR--IPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRK 382 (460)
T ss_dssp CGGGEEESCCCSSSCCGGGGBTTTCSSCBCCS--SSSCCTTTCCEEEEEEEEEEEEEEEEECCCCC--CCCGGGCCCEEE
T ss_pred CccccccccCCCcccCcchhhhccCCCCcccc--cccCCCccceEEEcCCCceEEEEEEecCCCCCCCccccccceeEEE
Confidence 356788898875 4678899998877778643 1123467899999999999999999987752 11245667
Q ss_pred cEEEEccCCCCCCCCCccCCCCCCCCCCCccc-----ceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEE
Q psy11954 96 LEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDL-----EIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVF 170 (881)
Q Consensus 96 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~ 170 (881)
|+|..+.+.. .|+.+.+. +++.|| ..........+. |+.|||||
T Consensus 383 Y~l~yS~dg~--------------~W~~~~~~~~~~~~vF~GN----------------~d~~~~v~~~l~-pi~aRyvR 431 (460)
T 2qqo_A 383 FKVSYSLNGK--------------DWEYIQDPRTQQPKLFEGN----------------MHYDTPDIRRFD-PIPAQYVR 431 (460)
T ss_dssp EEEEEESSSS--------------SCEECEETTTTEECCEECC----------------SSSSSCEEEEEE-EEEEEEEE
T ss_pred EEEEEEeCCC--------------ceEEEECCCCCccceeccc----------------cCCCceeeeeeC-ceEEEEEE
Confidence 8888876632 34444332 222222 111111222233 69999999
Q ss_pred EEEecCc-cceEeeEEEeeccc
Q psy11954 171 IQLVGVE-GSLSLCEVEIFTTD 191 (881)
Q Consensus 171 i~~~g~~-~~l~l~EveV~g~~ 191 (881)
|....-. +.+.| -|||||-+
T Consensus 432 i~p~~w~~~~i~m-R~El~gc~ 452 (460)
T 2qqo_A 432 VYPERWSPAGIGM-RLEVLGCD 452 (460)
T ss_dssp EEEEEECTTCCCB-EEEEEEEE
T ss_pred EEeCeeecCCeeE-EEEEeecC
Confidence 9987533 23344 57888854
No 193
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=98.21 E-value=2.7e-06 Score=100.08 Aligned_cols=139 Identities=15% Similarity=0.097 Sum_probs=85.7
Q ss_pred CCCCceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC-------CCCCCCcc
Q psy11954 24 LRRPTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC-------CGHQPLQD 95 (881)
Q Consensus 24 ~~k~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d-------~~~~~~~~ 95 (881)
..+..++||... ...|.+|.+++..+.|... ..+..+.++|+|||||+.+.|..|.+..|.+ -..+....
T Consensus 424 ~d~~itASS~~~~~~~p~~arl~~~~~~W~~~--~~~~~~~~qwLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~~ 501 (579)
T 2qqk_A 424 ADSQISASSTQEYLWSPSAARLVSSRSGWFPR--IPQAQPGEEWLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVRK 501 (579)
T ss_dssp CGGGEEESCCCC--CCGGGGBTTTCSSCBCCS--STTCCTTTCCEEEEEEEEEEEEEEEEECBC---------CCBCEEE
T ss_pred cccceecccCCCcccCchhheecccCcCCccc--ccccCCccceEEEecCCceEEEEEEeCCCCCCCCccccccceeeEE
Confidence 356788999876 4678999999887788654 1223467899999999999999999997752 12245667
Q ss_pred cEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEec
Q psy11954 96 LEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVG 175 (881)
Q Consensus 96 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g 175 (881)
|+|..+++.. .|+.+.+... + ...+|.+...........+. ++.||||||....
T Consensus 502 Y~l~~S~dg~--------------~W~~~~~~~~----------~-~~~vf~GN~d~~t~~~~~l~-pi~aRyVRi~p~~ 555 (579)
T 2qqk_A 502 FKVSYSLNGK--------------DWEYIQDPRT----------Q-QPKLFEGNMHYDTPDIRRFD-PIPAQYVRVYPER 555 (579)
T ss_dssp EEEEEESSSS--------------CCEECBCTTT----------S-SBCCEECCSSSSSCEEEEEE-EEEEEEEEEEEEE
T ss_pred EEEEEEcCCC--------------ceeEEEcCCC----------C-ceeeeeCccCCCCccccccC-ceEEEEEEEEcce
Confidence 8888877632 3444432100 0 00112222111122222334 6999999999875
Q ss_pred Cc-cceEeeEEEeeccc
Q psy11954 176 VE-GSLSLCEVEIFTTD 191 (881)
Q Consensus 176 ~~-~~l~l~EveV~g~~ 191 (881)
-. +.+.| -|||||-+
T Consensus 556 w~~~~i~m-R~El~gc~ 571 (579)
T 2qqk_A 556 WSPAGIGM-RLEVLGCD 571 (579)
T ss_dssp EBTTBCCB-EEEEEEEC
T ss_pred eccCCcEE-EEEeecCC
Confidence 33 23334 57999864
No 194
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=98.21 E-value=1.1e-06 Score=100.30 Aligned_cols=132 Identities=15% Similarity=0.126 Sum_probs=83.7
Q ss_pred CceeccCCC-CCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC---CCCCCcccEEEEcc
Q psy11954 27 PTNQSSTIR-GAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC---GHQPLQDLEIRVGN 102 (881)
Q Consensus 27 ~a~qSS~~~-~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~---~~~~~~~~~i~v~~ 102 (881)
..++||.+. ...|.+|.|++..+.|... ..+..+|+|||||..+.|..|.+..|.+- .......|+|..+.
T Consensus 154 ~itASS~~~~~~~p~~arl~~~~~~W~~~-----~~~~~qwlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~ 228 (450)
T 2qqm_A 154 QITASSQYSTNWSAERSRLNYPENGWTPG-----EDSYREWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSS 228 (450)
T ss_dssp GEEESCCSCGGGCGGGGBTTCSSCCBCCS-----SCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEES
T ss_pred cccccccccccchhhccccccCCCCccCC-----CCCCCceEEEcccceEEEEEEeccCCCCCCCCcceeEEEEEEEEeC
Confidence 345677765 4679999999887778543 23468999999999999999999876431 11356678887776
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceEe
Q psy11954 103 STDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSL 182 (881)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~l 182 (881)
+.. .|..+.+. .. . ..|.+...........+.+++.+|||||....-.....|
T Consensus 229 dg~--------------~W~~~~~~----------~~-~--~~F~GN~d~~~~v~~~l~~pi~aRyvRi~p~~w~~~~~l 281 (450)
T 2qqm_A 229 NGE--------------DWITIKEG----------NK-P--VLFQGNTNPTDVVVAVFPKPLITRFVRIKPATWETGISM 281 (450)
T ss_dssp SSS--------------SEEECBSS----------SS-B--CCEECCSSSSCCEEEEEEEEEEEEEEEEEEEEEESSCCB
T ss_pred CCC--------------ceeEEeCC----------Ce-e--eEeecccCCCcEEEEecCCceEEEEEEEEEeeccCceeE
Confidence 522 23222211 00 0 112222222233334444579999999998764444555
Q ss_pred eEEEeeccc
Q psy11954 183 CEVEIFTTD 191 (881)
Q Consensus 183 ~EveV~g~~ 191 (881)
+|||||-.
T Consensus 282 -r~E~~Gc~ 289 (450)
T 2qqm_A 282 -RFEVYGCK 289 (450)
T ss_dssp -EEEEEEEC
T ss_pred -EEEEeccc
Confidence 69999865
No 195
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural killer cell receptor, lectin, C-type lectin, immune system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Probab=98.14 E-value=1.5e-06 Score=87.35 Aligned_cols=60 Identities=28% Similarity=0.697 Sum_probs=48.3
Q ss_pred cceEEEEeeeCCCCccccEEEecCCCCCCCCCCCCCCCCCCCCCCeEEEeCCCCccccccccccccccceeecC
Q psy11954 203 TLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276 (881)
Q Consensus 203 ~~~~WiGl~~~~~~~~~~w~W~dg~~~~~~~W~~~ep~~~~~~~~Cv~i~~~~~~~Wnd~~C~~~~~~~iC~~~ 276 (881)
...|||||++. . ++.|.|+||++ |.+|+ ++ .+.++||.|.. ++|+|..|+. .+.|||+..
T Consensus 138 ~~~~WIGl~~~--~-~~~w~W~DGs~--~~~W~---~~--~~~~~Cv~l~~---~~W~d~~C~~-~~~fICe~~ 197 (199)
T 1fm5_A 138 REEHWVGLKKE--P-GHPWKWSNGKE--FNNWF---NV--TGSDKCVFLKN---TEVSSMECEK-NLYWICNKP 197 (199)
T ss_dssp SSCEEEEEECC--T-TSCCEETTSCB--CCCSS---CC--CSSSSEEEECS---SCEEEECTTS-CBEEEEEEE
T ss_pred CCCEEeeeEEC--C-CCCeEECCCCc--ccccc---CC--CCCCCceEEEC---CCEEEecCCC-CEEEEcccc
Confidence 35799999984 3 78999999997 67998 22 35789999976 3699999987 678999863
No 196
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=98.05 E-value=3.6e-06 Score=99.09 Aligned_cols=132 Identities=11% Similarity=0.013 Sum_probs=83.8
Q ss_pred CceeccCCCC--CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC---CCCCCcccEEEEc
Q psy11954 27 PTNQSSTIRG--APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC---GHQPLQDLEIRVG 101 (881)
Q Consensus 27 ~a~qSS~~~~--~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~---~~~~~~~~~i~v~ 101 (881)
..++||.+.. ..|.+|.++...+.|... ..+..+|+||||+..+.|..|.+..|.+- .......|+|..+
T Consensus 270 qitaSS~~~~~~~~p~~arl~~~~~~W~~~-----~~~~~qwlqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S 344 (579)
T 2qqk_A 270 QISASSTYSDGRWTPQQSRLHGDDNGWTPN-----LDSNKEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVS 344 (579)
T ss_dssp GEEESCCCTTSCSCGGGCBTTCSSCCBCCS-----SCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEE
T ss_pred cceeeeeecccccCcchhhccCCCceecCC-----CCCCCceEEeecceeEEEEEEEccCCccCCCCcccceEEEEEEEE
Confidence 3467777653 678899998877777543 23578999999999999999999987421 1134557777777
Q ss_pred cCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceE
Q psy11954 102 NSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLS 181 (881)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~ 181 (881)
.+.. .|..+.+.. .-..+.+...........+.+++.+|||||....-.....
T Consensus 345 ~dg~--------------~W~~~~~~~-------------~~~~f~GN~d~~~~v~~~l~~pi~aRyvRi~p~~~~~~~~ 397 (579)
T 2qqk_A 345 TNGE--------------DWMVYRHGK-------------NHKVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIA 397 (579)
T ss_dssp SSSS--------------SCEECEETT-------------EECCEECCSSSSCCEEEEEEEEEEEEEEEEEEEEEESSCC
T ss_pred CCCC--------------ceeeeecCC-------------cceEEcCCCCCCcEEEEeCCCCeeeEEEEEEEEEcCCccE
Confidence 6522 233332211 0011222222222333334457999999999876555566
Q ss_pred eeEEEeeccc
Q psy11954 182 LCEVEIFTTD 191 (881)
Q Consensus 182 l~EveV~g~~ 191 (881)
| +|||||-+
T Consensus 398 l-r~E~~Gc~ 406 (579)
T 2qqk_A 398 L-RLELFGCR 406 (579)
T ss_dssp B-EEEEEEEC
T ss_pred E-eeeeeccc
Confidence 6 89999875
No 197
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=98.04 E-value=4.3e-06 Score=95.52 Aligned_cols=131 Identities=11% Similarity=0.013 Sum_probs=82.0
Q ss_pred ceeccCCCC--CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC---CCCCCcccEEEEcc
Q psy11954 28 TNQSSTIRG--APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC---GHQPLQDLEIRVGN 102 (881)
Q Consensus 28 a~qSS~~~~--~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~---~~~~~~~~~i~v~~ 102 (881)
.++||.+.. ..|.+|.+.+....|... ..+..+|+||||+..+.|..|.+..|.+- .......|+|..+.
T Consensus 152 itaSS~~~~~~~~p~~arl~~~~~~W~~~-----~~~~~~wlqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~ 226 (460)
T 2qqo_A 152 ISASSTYSDGRWTPQQSRLHGDDNGWTPN-----LDSNKEYLQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVST 226 (460)
T ss_dssp EEESCCCTTSSSCGGGCBTTCSSCCBCCS-----SCSTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEES
T ss_pred eeeeeeccCcccChhhhhhcCCCceeeCC-----CCCcceeEeccCCceEEEEEEEeecCCCCCCCccceEEEEEEEEEc
Confidence 456776654 578899988877667433 23578999999999999999999977431 11245567777766
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceEe
Q psy11954 103 STDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSL 182 (881)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~l 182 (881)
+.. .|..+.+.. .-..|.+...........+.+++.+|||||....-.....|
T Consensus 227 dg~--------------~W~~~~~~~-------------~~~~F~Gn~d~~~~v~~~l~~pi~aRyvRi~p~~~~~~~~l 279 (460)
T 2qqo_A 227 NGE--------------DWMVYRHGK-------------NHKVFQANNDATEVVLNKLHAPLLTRFVRIRPQTWHSGIAL 279 (460)
T ss_dssp SSS--------------SCEECEETT-------------EECCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESSCCB
T ss_pred CCC--------------CeeEecCCC-------------ccEEEecccCCCceEEEeCCCCeeeeEEEEEeeeccCcceE
Confidence 522 232232110 00122222222223333344579999999998765555666
Q ss_pred eEEEeeccc
Q psy11954 183 CEVEIFTTD 191 (881)
Q Consensus 183 ~EveV~g~~ 191 (881)
+|||||-.
T Consensus 280 -r~E~~Gc~ 287 (460)
T 2qqo_A 280 -RLELFGCR 287 (460)
T ss_dssp -EEEEEEEC
T ss_pred -EEeeeecc
Confidence 79999865
No 198
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=98.02 E-value=1.2e-05 Score=86.67 Aligned_cols=134 Identities=16% Similarity=0.127 Sum_probs=78.1
Q ss_pred ceeccCCCC-CCCCCCcCCCCCCCcCCCceeccC--CCCCCcEEEEcCCeEEEEEEEEEccCCC--CCCCCcccEEEEcc
Q psy11954 28 TNQSSTIRG-APSSNANDGELTTVHDGKRCTETQ--KEVSPWWQVDLLRPYPIRIVRITTRGCC--GHQPLQDLEIRVGN 102 (881)
Q Consensus 28 a~qSS~~~~-~~a~~AvDG~~~~~~~~~~c~~t~--~~~~pWw~VDLg~~~~i~~V~i~nr~d~--~~~~~~~~~i~v~~ 102 (881)
.++||.+.. ..|.+|-=.... ...++|+.+. .+..+|+||||++.+.|..|.+.-|.+- ..+....|+|..+.
T Consensus 22 ITASS~~~~~~~p~~ARLn~~~--~~gaW~a~~~~~~d~~qWLQVDLg~~~~VtgV~TQGr~~~g~~~~wVtsY~l~yS~ 99 (351)
T 4ag4_A 22 ISASSSWSDSTAARHSRLESSD--GDGAWCPAGSVFPKEEEYLQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSR 99 (351)
T ss_dssp EEESCCSSGGGCGGGCBTTCCT--TTSSBCCSSCCCSSCCCCEEEEEEEEEEEEEEEEECBCGGGTCCBCCSEEEEEEES
T ss_pred eEEeCcCCCccChhhhhcccCC--CCccccccccccCCCCCEEEecCCCeEEEEEEEEecccCCCCccceEEEEEEEEEe
Confidence 456776543 345554322211 1233455554 3689999999999999999999987532 13567788888877
Q ss_pred CCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC-ccceE
Q psy11954 103 STDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV-EGSLS 181 (881)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~-~~~l~ 181 (881)
+.. .|..+.+. ... .++.+...........+.+|+.+|||||.-..- .....
T Consensus 100 DG~--------------~W~~y~d~----------~~~---kvF~GN~D~~t~v~n~l~~PI~ARyVRi~P~~w~~~~i~ 152 (351)
T 4ag4_A 100 DGR--------------RWMGWKDR----------WGQ---EVISGNEDPEGVVLKDLGPPMVARLVRFYPRADRVMSVC 152 (351)
T ss_dssp SSS--------------CEEECCCT----------TSC---CCEECCSSSSCCEEEEEEEEEEEEEEEEEEECSSSCCCC
T ss_pred CCC--------------cEEEEECC----------Ccc---ccccccCCCCceEEEeCCCCcEEEEEEEEEEEccCCceE
Confidence 632 23222211 000 123332222333444455689999999998753 22333
Q ss_pred eeEEEeeccc
Q psy11954 182 LCEVEIFTTD 191 (881)
Q Consensus 182 l~EveV~g~~ 191 (881)
| -|||||=+
T Consensus 153 L-RvELyGC~ 161 (351)
T 4ag4_A 153 L-RVELYGCL 161 (351)
T ss_dssp B-EEEEEEEE
T ss_pred E-EEEEeccc
Confidence 4 57888743
No 199
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=98.01 E-value=5.4e-06 Score=97.23 Aligned_cols=131 Identities=15% Similarity=0.102 Sum_probs=78.5
Q ss_pred ceeccCCCC-CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC---CCCCCCcccEEEEccC
Q psy11954 28 TNQSSTIRG-APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC---CGHQPLQDLEIRVGNS 103 (881)
Q Consensus 28 a~qSS~~~~-~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d---~~~~~~~~~~i~v~~~ 103 (881)
-++||.+.. ..|.+|--....+.|. +. ..+.++|+||||++.+.|..|.+.-|.. ...+.+..|+|..+.+
T Consensus 273 itASS~~~~~~~p~~aRLn~~~~aW~----~~-~~~~~qwlqVDl~~~~~it~v~tQG~~~~~~~~~~~v~~y~v~~s~d 347 (577)
T 4gz9_A 273 ITASSQYGTNWSVERSRLNYPENGWT----PG-EDSYKEWIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYRVDISSN 347 (577)
T ss_dssp EEESCCSCGGGCGGGCBTTCSSCCBC----CS-SCCTTCCEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESS
T ss_pred cccCCcCcCCCCcccccccCCCCccc----CC-CCCCCeEEEEcCCCEEEEEEEEccCCCCCCCCcceeEEEEEEEEEcC
Confidence 357777653 5677776654444564 33 3468999999999999999999986621 1112455677777666
Q ss_pred CCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceEee
Q psy11954 104 TDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLC 183 (881)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~l~ 183 (881)
.. .|..+++. .. -.++.+..+......-.+.+|+.||||||.-..-.....|
T Consensus 348 g~--------------~w~~y~~~----------~~---~~vf~GN~d~~~~v~~~l~~pi~aryvRi~p~~~~~~~~m- 399 (577)
T 4gz9_A 348 GE--------------DWISLKEG----------NK---AIIFQGNTNPTDVVLGVFSKPLITRFVRIKPVSWETGISM- 399 (577)
T ss_dssp SS--------------SCEECBSS----------SS---BCCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEESSCCB-
T ss_pred CC--------------cEEEEecC----------CC---ceEEeCCCCCCcEeEeecCCCcEEEEEEEEeEeccccEEE-
Confidence 32 22222110 00 0122232222233333345689999999998765555555
Q ss_pred EEEeeccc
Q psy11954 184 EVEIFTTD 191 (881)
Q Consensus 184 EveV~g~~ 191 (881)
.|||||=+
T Consensus 400 R~El~Gc~ 407 (577)
T 4gz9_A 400 RFEVYGCK 407 (577)
T ss_dssp EEEEEEEC
T ss_pred EEEecccc
Confidence 69999854
No 200
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=98.01 E-value=5.9e-06 Score=98.49 Aligned_cols=137 Identities=11% Similarity=0.057 Sum_probs=84.7
Q ss_pred CCCceeccCCCCCCCCCCcCCCCC--CCcCCCceeccCC---CCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCcccEE
Q psy11954 25 RRPTNQSSTIRGAPSSNANDGELT--TVHDGKRCTETQK---EVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDLEI 98 (881)
Q Consensus 25 ~k~a~qSS~~~~~~a~~AvDG~~~--~~~~~~~c~~t~~---~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~~i 98 (881)
.+..++||......|.+|.+++.. +.|. +.... +..+|+||||++.+.|.+|.+..|.+- ..+....|+|
T Consensus 343 ~~~i~asS~~~~~~p~~arl~~~~~~~~W~----~~~~~~~~~~~qwlqVDLg~~~~vt~v~tqg~~~~~~~~~v~~y~i 418 (647)
T 1sdd_B 343 DSQIQASEFWGYWEPKLARLNNGGSYNAWI----AEKLSTEFNPEPWIQVDMQKEVLLTGIQTQGAKHYLKPYYTTEFCV 418 (647)
T ss_dssp GGGEEESCCSTTCCGGGCBTTCCSSSCSEE----CSCCCCSSCCCSCEEEEEEEEEEEEEEEEECEESSSSEEEEEEEEE
T ss_pred cccccccccccccccceeeecCCCCccccc----CCCCcccccccceEEeccCCeEEEEEEEEcCCCCCCCccEEEEEEE
Confidence 456678888777889999999853 4564 33332 247999999999999999999877531 1246667888
Q ss_pred EEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCcc
Q psy11954 99 RVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEG 178 (881)
Q Consensus 99 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~ 178 (881)
..+.+.. .|..+.+.. . ..-..|.+...........+.+++.+|||||.......
T Consensus 419 ~yS~Dg~--------------~W~~~~~~~----------~-~~~~~f~gn~d~~~~v~~~l~~pi~aRyVRi~p~~~~~ 473 (647)
T 1sdd_B 419 AYSLDRK--------------NWRIFKGNS----------T-RNVMYFGGNSDASTIKENQIDPPVVARYIRISPTGSYN 473 (647)
T ss_dssp EEESSSS--------------SCEECCSSC----------S-SSSCCEECCSSSSSCEEEEEEEEEEEEEEEEEEEEEES
T ss_pred EEEcCCC--------------ceEEecccC----------C-CcceEecCCCCCCceeEEcCCCCEEEEEEEEEEEeecC
Confidence 8776632 222222110 0 00012222222222233334457999999999886444
Q ss_pred ceEeeEEEeeccc
Q psy11954 179 SLSLCEVEIFTTD 191 (881)
Q Consensus 179 ~l~l~EveV~g~~ 191 (881)
.. .-+|||||-+
T Consensus 474 ~~-~lr~ElyGc~ 485 (647)
T 1sdd_B 474 KP-ALRLELQGCE 485 (647)
T ss_dssp SC-EEEEEEEEEC
T ss_pred cc-eeeecccccc
Confidence 44 4469999875
No 201
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=98.01 E-value=1.3e-05 Score=96.30 Aligned_cols=134 Identities=12% Similarity=0.068 Sum_probs=82.7
Q ss_pred CCCceeccCCCC----CCCCCCcCCC--CCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCCcccE
Q psy11954 25 RRPTNQSSTIRG----APSSNANDGE--LTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPLQDLE 97 (881)
Q Consensus 25 ~k~a~qSS~~~~----~~a~~AvDG~--~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~~~~~ 97 (881)
.+..++||.+.. ..|.+|...+ ..+.|.. .+ .+..+|+|||||+.+.|..|.+..|.+- ..+....|+
T Consensus 625 d~qitASS~~~~~~~~~~P~~ARL~~~~~~~aW~a----~~-~d~~qwLQVDLg~~~~VtgV~tQG~~~~~~~~~VtsY~ 699 (770)
T 2r7e_B 625 DAQITASSYFTNMFATWSPSKARLHLQGRSNAWRP----QV-NNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFL 699 (770)
T ss_dssp TTSCCBSCCCBCSSCBCCGGGCBTTCCSTTCSBCC----SS-CCSSCCEEECCSSCCCBCCEEECCCCCTTCCCCCCEEE
T ss_pred ccceEEccccCCCcccccccceeecCCCCCceEEC----CC-CCCCceEEEccccceEEEEEEEeCCcCcCcccceEEEE
Confidence 467788887643 3566664443 4456643 33 3578999999999999999999877532 224566777
Q ss_pred EEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc
Q psy11954 98 IRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE 177 (881)
Q Consensus 98 i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~ 177 (881)
|..+.+.. .|..+.+. . .-.+|.+...........+..++.+|||||....-.
T Consensus 700 l~yS~DG~--------------~W~~y~~~---------g----~~kvF~GN~D~~t~v~~~l~~pi~ARyVRi~p~~w~ 752 (770)
T 2r7e_B 700 ISSSQDGH--------------QWTLFFQN---------G----KVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWV 752 (770)
T ss_dssp ECCBSSTT--------------CBCCCBCS---------S----SBCCEECCSCSSSCEEECCSSCCCCSBEEEEECSCS
T ss_pred EEEEcCCC--------------cEEEEecC---------C----ceeecccCCCCCceEEEEcCCCEEEEEEEEEEEecC
Confidence 77665522 23333210 0 001233222223344555667899999999987655
Q ss_pred cceEeeEEEeeccc
Q psy11954 178 GSLSLCEVEIFTTD 191 (881)
Q Consensus 178 ~~l~l~EveV~g~~ 191 (881)
..+.| .|||||-.
T Consensus 753 ~~i~m-R~ElyGC~ 765 (770)
T 2r7e_B 753 HQIAL-RMEVLGCE 765 (770)
T ss_dssp SSCCB-CEECCBCC
T ss_pred CCeEE-EEEEEccC
Confidence 55555 79999853
No 202
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=97.95 E-value=5.8e-06 Score=98.52 Aligned_cols=138 Identities=13% Similarity=0.108 Sum_probs=80.4
Q ss_pred ccCCCCceeccCCC-----CCCCCCCc--CCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCC-CCCCC
Q psy11954 22 VALRRPTNQSSTIR-----GAPSSNAN--DGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCC-GHQPL 93 (881)
Q Consensus 22 lA~~k~a~qSS~~~-----~~~a~~Av--DG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~-~~~~~ 93 (881)
....+..++||... ...|.+|. |....+.|. +.. .+.++|+|||||+.+.|..|.+..|.+- ..+..
T Consensus 499 ~I~d~~itASS~~~~~~~~~~~p~~arL~~~g~~~~W~----a~~-~~~~qwLqVDLg~~~~vt~v~tqg~~~~~~~~~v 573 (647)
T 1sdd_B 499 KIENKQITASSFKKSWWGNYWEPFLARLNAQGRVNAWQ----AKA-NNNNQWLQIDLLKIKKITAIVTQGCKSLSSEMYV 573 (647)
T ss_dssp SSCSTTEEESCCCEETTTEECCGGGCBSSCCSSSCSEE----CSS-CSSCCCEEEEEEEEEEEEEEEEECEEETTEEEEE
T ss_pred ccCCCceeeccccccccccccCccccccccCCCccccc----CCC-CCCCcEEEEeCCCceEEEEEEeecCCCCCCCcce
Confidence 44457888998853 24566663 323345563 322 3468999999999999999999876421 12355
Q ss_pred cccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEE
Q psy11954 94 QDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQL 173 (881)
Q Consensus 94 ~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~ 173 (881)
..|+|..+.+.. .|..+.+.. . ..-..|.+...........+..++.||||||..
T Consensus 574 ~~y~l~~S~dg~--------------~W~~~~~~~----------~-~~~~~F~GN~d~~~~~~~~l~~pi~ARyvRi~p 628 (647)
T 1sdd_B 574 KSYTIHYSDQGT--------------DWKPYREKS----------S-MVDKIFEGNNNVRGHVKNFFNPPIISRFIRIIP 628 (647)
T ss_dssp EEECEEEESSSS--------------CCEECCCSS----------C-SSCCCEECCSSSSCCEEEEEEEEEEEEEEEECC
T ss_pred EEEEEEEECCCC--------------cEEEEEcCC----------C-cceeeeeccCCCCceEEEeCCCcEEEEEEEEEE
Confidence 678888776632 233332110 0 000122222221222233334579999999997
Q ss_pred ecCccceEeeEEEeecc
Q psy11954 174 VGVEGSLSLCEVEIFTT 190 (881)
Q Consensus 174 ~g~~~~l~l~EveV~g~ 190 (881)
..-...+.| .|||||-
T Consensus 629 ~~w~~~i~~-R~El~Gc 644 (647)
T 1sdd_B 629 KTWNQSIAL-RLELFGC 644 (647)
T ss_dssp CEEESSCEE-EEEEEEE
T ss_pred EEcCCCcEE-EEEEEeE
Confidence 654444555 7999985
No 203
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=97.93 E-value=1.9e-05 Score=92.60 Aligned_cols=131 Identities=17% Similarity=0.109 Sum_probs=78.9
Q ss_pred CCCceeccCCCC-CCCCCCcCCCCCCCcCCCceecc--CCCCCCcEEEEcCCeEEEEEEEEEccCCCCC-CCCcccEEEE
Q psy11954 25 RRPTNQSSTIRG-APSSNANDGELTTVHDGKRCTET--QKEVSPWWQVDLLRPYPIRIVRITTRGCCGH-QPLQDLEIRV 100 (881)
Q Consensus 25 ~k~a~qSS~~~~-~~a~~AvDG~~~~~~~~~~c~~t--~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~-~~~~~~~i~v 100 (881)
....++||.+.. ..|.+|...+..+.| |... ..+.++|+||||++.+.|..|.+.-|.+-.. +....|+|..
T Consensus 426 d~~itASS~~~~~~~p~~aRL~~~~~~w----~~~~~~~~~~~qwLqVDLg~~~~VtgV~tQG~~~~~~~~~vtsY~l~y 501 (577)
T 4gz9_A 426 DSQITASNQADRNWMPENIRLVTSRTGW----ALPPSPHPYTNEWLQVDLGDEKIVRGVIIQGGKHRENKVFMRKFKIAY 501 (577)
T ss_dssp GGGEEETTTTSTTCCGGGGBTTTCSSCE----EECCCSSCCCSCCEEEEEEEEEEEEEEEEECEESSSCEECEEEEEEEE
T ss_pred CCccccccccCCCcChhheeecCCCCCc----ccccCCCCCCCceEEEECCCcEEEEEEEEeCCCCCCcceeEEEEEEEE
Confidence 345667887653 567777665544444 2222 3346799999999999999999987643222 3567788888
Q ss_pred ccCCCCCCCCCccCCCCCCCCCCCcc-----cceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEe-
Q psy11954 101 GNSTDLQKNPLCAWFPGTLGHQPLQD-----LEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLV- 174 (881)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~- 174 (881)
+++.. .|.++.+ .+++.||. .........+. |+.||||||.-.
T Consensus 502 S~Dg~--------------~W~~~~~~~~~~~kvF~GN~----------------d~~t~v~~~~~-Pi~ARyvRi~P~~ 550 (577)
T 4gz9_A 502 SNNGS--------------DWKTIMDDSKRKAKSFEGNN----------------NYDTPELRTFS-PLSTRFIRIYPER 550 (577)
T ss_dssp ESSSS--------------SCEECBCTTSSSBCCEECCS----------------SSSCCEEEEEE-EEEEEEEEEEEEE
T ss_pred ECCCC--------------CeEEEEcCCCCceEEeeCcc----------------CCCeeEEeecC-CEEEEEEEEEEEE
Confidence 77633 3333322 12233221 11111222223 799999999853
Q ss_pred cCccceEeeEEEeeccc
Q psy11954 175 GVEGSLSLCEVEIFTTD 191 (881)
Q Consensus 175 g~~~~l~l~EveV~g~~ 191 (881)
.-.....| .|||||=+
T Consensus 551 ~~~~~i~l-R~El~GC~ 566 (577)
T 4gz9_A 551 ATHSGLGL-RMELLGCE 566 (577)
T ss_dssp EBTTBEEE-EEEEEEEC
T ss_pred ecCCCEEE-EEEEcccC
Confidence 23335666 69999854
No 204
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=97.90 E-value=9.7e-06 Score=97.52 Aligned_cols=134 Identities=14% Similarity=0.063 Sum_probs=84.1
Q ss_pred CCCceeccCCCCCCCCCCcCCCC--CCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCC-CCCCCCcccEEEEc
Q psy11954 25 RRPTNQSSTIRGAPSSNANDGEL--TTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC-CGHQPLQDLEIRVG 101 (881)
Q Consensus 25 ~k~a~qSS~~~~~~a~~AvDG~~--~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d-~~~~~~~~~~i~v~ 101 (881)
....++||.+....|.+|.+++. .+.|. + .+.++|+||||++++.|..|.+..|.+ -..+....|+|..+
T Consensus 472 d~~ItASS~~~~~~p~~arL~~~~~~~aW~----~---~~~~qwLQVDLg~~~~Vt~V~tQG~~~~~~~~~v~sY~I~yS 544 (770)
T 2r7e_B 472 DFQITASGQYGQWAPKLARLHYSGSINAWS----T---KEPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYS 544 (770)
T ss_dssp TTSCCCSCCSSSCCTTCCSSCCSTTCSSEE----C---CSSCCCEEEEEEEEEEECBCCCCCEECSSSEECCSEEEEEEE
T ss_pred ceEEeeccccCccchheEEECCCCCccccc----c---CCCCceEEecCCceEEEEEEEEcccCcCCcccceEEEEEEEe
Confidence 45667888877778999998875 34553 3 357899999999999999999976642 12245677888887
Q ss_pred cCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceE
Q psy11954 102 NSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLS 181 (881)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~ 181 (881)
.+.. .|..+.+.. ++ .-..|.+...........+..++.+|||||.........
T Consensus 545 ~DG~--------------~W~~y~~~~-------~g----~~~vF~GN~D~~tvv~~~l~~pi~ARyVRi~p~~~~~~~- 598 (770)
T 2r7e_B 545 LDGK--------------KWQTYRGNS-------TG----TLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRS- 598 (770)
T ss_dssp SSSS--------------SCBCCCCSS-------SS----SSCCCCCCSSTTCCCCCCCSSCEEEEEEEEEEEECSSSC-
T ss_pred cCCC--------------ccEEeeccc-------cc----ceeeecCCCCCCceeEEeccCceeEeEEEEecccccccc-
Confidence 7633 232222110 00 001122211111122334456899999999988655444
Q ss_pred eeEEEeeccc
Q psy11954 182 LCEVEIFTTD 191 (881)
Q Consensus 182 l~EveV~g~~ 191 (881)
.-+|||||-+
T Consensus 599 ~mRvElyGc~ 608 (770)
T 2r7e_B 599 TLRMELMGCD 608 (770)
T ss_dssp EECCCCBCCT
T ss_pred eeeeeccccc
Confidence 4469999875
No 205
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=97.88 E-value=3e-05 Score=80.57 Aligned_cols=132 Identities=13% Similarity=0.114 Sum_probs=84.3
Q ss_pred CCCceeccCCC-CCCCCCCcCCCCCC-----CcCCCceeccCCCCCCcEEEEcCC--eEEEEEEEEEccCCCCCCCCccc
Q psy11954 25 RRPTNQSSTIR-GAPSSNANDGELTT-----VHDGKRCTETQKEVSPWWQVDLLR--PYPIRIVRITTRGCCGHQPLQDL 96 (881)
Q Consensus 25 ~k~a~qSS~~~-~~~a~~AvDG~~~~-----~~~~~~c~~t~~~~~pWw~VDLg~--~~~i~~V~i~nr~d~~~~~~~~~ 96 (881)
.+..++||.+. ...|.+|...+..+ ...+.+|+.++ +.++|+ |||. .+.|..|.+.-|.+ ..+....|
T Consensus 15 d~~itASS~~~~~~~p~~aRLn~~~~~~~~~~~~~aW~a~~~-d~~qwL--DLg~~~~~~VtgV~tQG~~~-~~~~VtsY 90 (254)
T 2wn3_A 15 QCHLRTSTNYNGVHTQFNSALNYKNNGTNTIDGSEAWCSSIV-DTNQYI--VAGCEVPRTFMCVALQGRGD-ADQWVTSY 90 (254)
T ss_dssp CSEEEESCCSSTTSSGGGCBTTCCCCTTCGGGCCSSEECSSC-STTCCE--EEEEEEEEEEEEEEEECCSS-SSCEEEEE
T ss_pred CCCEEEcccCCCCCCcceEEeCCcccccccCCCCCeeeCCCC-CchheE--EcCCCeEEEEEEEEEeCCCC-CCCceEEE
Confidence 45667888864 46788888665421 11233555555 578999 9999 99999999998864 23566778
Q ss_pred EEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecC
Q psy11954 97 EIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGV 176 (881)
Q Consensus 97 ~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~ 176 (881)
+|..+.+.. .|+.+.+.+++.||. .........+.+|+.+|||||.-..-
T Consensus 91 ~l~yS~dg~--------------~W~~y~~~~vF~GN~----------------d~~t~v~~~l~~pi~ARyvRi~P~~w 140 (254)
T 2wn3_A 91 KIRYSLDNV--------------SWFEYRNGAAVTGVT----------------DRNTVVNHFFDTPIRARSIAIHPLTW 140 (254)
T ss_dssp EEEEESSSS--------------SCEEGGGGCCEECCS----------------SSSCCEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEECCCC--------------cEEEecCCcEEeccC----------------CCCeeEEEecCCCcEEEEEEEEEEEe
Confidence 887776622 344444434443332 22222333445689999999998754
Q ss_pred ccceEeeEEEeeccc
Q psy11954 177 EGSLSLCEVEIFTTD 191 (881)
Q Consensus 177 ~~~l~l~EveV~g~~ 191 (881)
.....| -|||||-+
T Consensus 141 ~~~i~l-R~El~Gc~ 154 (254)
T 2wn3_A 141 NGHISL-RCEFYTQP 154 (254)
T ss_dssp ESSCEE-EEEEEECC
T ss_pred cCccEE-EEEeccCC
Confidence 434444 67999874
No 206
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=97.81 E-value=1.7e-05 Score=64.35 Aligned_cols=60 Identities=22% Similarity=0.500 Sum_probs=48.1
Q ss_pred cccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEc--CCCeeEeCCCC-----eecCCCCceecc
Q psy11954 803 AIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI--GPYLRKCMEDG-----SWSGDEPRCEKR 864 (881)
Q Consensus 803 ~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~--G~~~~~C~~~G-----~Ws~~~P~C~~~ 864 (881)
.+.|++|+..+|..+ ....|..+++++|+|++||.-. ++..++|..|| +|+.+.-+|++.
T Consensus 8 ~~~C~~Pp~ve~a~~--r~~~y~v~s~vRYqC~~Gf~rr~g~s~lirC~~n~~~~~~~Wt~P~L~CI~e 74 (78)
T 2psm_F 8 GTTCPPPVSIEHADI--RVKNYSVNSRERYVCNSGFKRKAGTSTLIECVINKNTNVAHWTTPSLKCIRD 74 (78)
T ss_dssp --CCCCCCCCTTEEC--CCSCCSTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEEEC
T ss_pred CCcCCCCCccccccc--ceeeeccCCEEEEecchhHHhhCCCCCceEEEcCCCcCcceecCCCeEEecC
Confidence 578999999999876 3334666999999999999754 58899999876 799887889854
No 207
>2psm_F Interleukin-15 receptor alpha chain; cytokine, glycoprotein, secreted, alternative splicing, endoplasmic reticulum, golgi apparatus, membrane; 2.19A {Mus musculus} SCOP: g.18.1.1
Probab=97.66 E-value=4.4e-05 Score=62.04 Aligned_cols=60 Identities=13% Similarity=0.345 Sum_probs=48.0
Q ss_pred cccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCcee-c-CCceeeeccCC-----cccCCCCceeec
Q psy11954 662 YVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRL-E-GHARRLCLENG-----TWSSGLPTCKGN 723 (881)
Q Consensus 662 ~v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L-~-G~~~~~C~~~G-----~Ws~~~P~C~~~ 723 (881)
.+.|++|+..+|..+ ....|..+++++|.|++||.- . +++.+.|+.|| .|+.+.-.|+..
T Consensus 8 ~~~C~~Pp~ve~a~~--r~~~y~v~s~vRYqC~~Gf~rr~g~s~lirC~~n~~~~~~~Wt~P~L~CI~e 74 (78)
T 2psm_F 8 GTTCPPPVSIEHADI--RVKNYSVNSRERYVCNSGFKRKAGTSTLIECVINKNTNVAHWTTPSLKCIRD 74 (78)
T ss_dssp --CCCCCCCCTTEEC--CCSCCSTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEEEC
T ss_pred CCcCCCCCccccccc--ceeeeccCCEEEEecchhHHhhCCCCCceEEEcCCCcCcceecCCCeEEecC
Confidence 468999999999977 345577899999999999954 4 57899999876 599887788753
No 208
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=97.36 E-value=0.00023 Score=77.56 Aligned_cols=62 Identities=31% Similarity=0.627 Sum_probs=51.3
Q ss_pred ccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCC-EEcCC--CeeEeCCCCeecC-----CCCceeccCC
Q psy11954 804 IDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQY-QRIGP--YLRKCMEDGSWSG-----DEPRCEKRFN 866 (881)
Q Consensus 804 v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy-~l~G~--~~~~C~~~G~Ws~-----~~P~C~~~~~ 866 (881)
+.|+.|+.+.||.+... ....||++++|+|+++| .|.+. ..++|.++|.|.. .+|.|++.+.
T Consensus 2 v~C~~p~~~~~g~~~~~-~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~~~~c~~~CG 71 (333)
T 1elv_A 2 LDCGIPESIENGKVEDP-ESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVPVCG 71 (333)
T ss_dssp CBCCSCCCCTTEEECCC-SCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEEECCS
T ss_pred CCCCCCCcccCCceecC-CCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccccccccCCcC
Confidence 68999999999998633 35789999999999985 67665 7899999999987 7899998653
No 209
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=97.19 E-value=0.00038 Score=75.77 Aligned_cols=60 Identities=35% Similarity=0.817 Sum_probs=49.2
Q ss_pred ccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCc-eecCC--ceeeeccCCcccC-----CCCceeec
Q psy11954 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENY-RLEGH--ARRLCLENGTWSS-----GLPTCKGN 723 (881)
Q Consensus 663 v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy-~L~G~--~~~~C~~~G~Ws~-----~~P~C~~~ 723 (881)
|.|+.|+.+.||.+.. ...+.|+++++|+|++|| +|.+. ...+|.++|.|.. ..|.|.+.
T Consensus 2 v~C~~p~~~~~g~~~~-~~~~~~~s~~~~~C~~~yy~~~~~~~~~~~C~~~g~w~~~~~~~~~~~c~~~ 69 (333)
T 1elv_A 2 LDCGIPESIENGKVED-PESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVPV 69 (333)
T ss_dssp CBCCSCCCCTTEEECC-CSCCBTTCEEEEEECTTTEEEC--CCSEEEECTTSCEEBTTTBTSCCCEEEC
T ss_pred CCCCCCCcccCCceec-CCCCccceeEEEECCCCeEeeecCCCceEEECCCCeEcccccccccccccCC
Confidence 6899999999999873 335679999999999985 67665 7899999999986 67888876
No 210
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=96.98 E-value=0.00015 Score=85.98 Aligned_cols=110 Identities=10% Similarity=-0.017 Sum_probs=48.0
Q ss_pred CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCCCCCCCccCCC
Q psy11954 37 APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFP 116 (881)
Q Consensus 37 ~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~~~~~~~~~~ 116 (881)
+.+.+|+||+..+.|..+. .+......|++|||++++.|+.|.|.-|.+- .. ..++|.++.+..
T Consensus 603 g~~~~a~Dgd~~T~w~s~~--~~~~~~g~wi~VdL~~~~~V~~I~i~~~~~~--~~-~~~~ve~S~DGk----------- 666 (716)
T 2cho_A 603 KNLPLQVKANRVLISPANE--VVKWAAGNSVEIELDAIYPGENIQINFGKDA--PC-TWGRLEISTDAK----------- 666 (716)
T ss_dssp -CCCEEEETTEEEECC--------------CEEEEEEEEEEEEEEECC--------------------------------
T ss_pred cCchheeCCCcceEEECCC--CccCCCCCEEEEEcCCcEEEEEEEEecCCCC--CC-ceEEEEEECCCC-----------
Confidence 6789999999999986541 2223567899999999999999999988542 11 124444444321
Q ss_pred CCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCCcceEEEEEEecCc--cceEeeEEEeecc
Q psy11954 117 GTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVE--GSLSLCEVEIFTT 190 (881)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~--~~l~l~EveV~g~ 190 (881)
.|+++ ++ .. ....+++.. .++++|||||...... ... +.|++||..
T Consensus 667 ---~W~~v-~~-------------------~~---~~~~~~~~~-~pv~ARyVRl~~~~~~~~~~w-i~Ef~V~~~ 714 (716)
T 2cho_A 667 ---EWKTV-DL-------------------KQ---KESRLSAGL-QKAPVKFVRFTNVSDEEQQVY-LRQFVLTIE 714 (716)
T ss_dssp --------------------------------------CCEEEC-TTCEEEEEEC--------------CEEEEES
T ss_pred ---CccCC-Cc-------------------CC---cceEEEecc-CCceeEEEEEEecccCCCCee-EEEEEEecc
Confidence 23333 11 00 011223321 3789999999988542 123 999999975
No 211
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=96.81 E-value=0.00099 Score=56.69 Aligned_cols=58 Identities=21% Similarity=0.536 Sum_probs=47.1
Q ss_pred cccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEE-c-CCCeeEeCCC-----CeecCCCCcee
Q psy11954 803 AIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQR-I-GPYLRKCMED-----GSWSGDEPRCE 862 (881)
Q Consensus 803 ~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l-~-G~~~~~C~~~-----G~Ws~~~P~C~ 862 (881)
.+.|+.|+..+|..+. ...|..|+.++|+|+.||+- . ++..++|.-+ .+|+.+.-+|+
T Consensus 5 ~~~C~~Pp~~EHad~r--v~~y~v~s~vRYqC~~Gykrkagtsali~Ck~~~~~g~~~WT~P~LkCI 69 (107)
T 2z3q_B 5 SITCPPPMSVEHADIW--VKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCI 69 (107)
T ss_dssp CCBCCCCCCCTTEECC--CSCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEE
T ss_pred CccCCCCCCcccccce--eEEeccCCEEEEecchhhhhhcCCCCccEEEecccCCcceecCCCeEEe
Confidence 4689999999998772 33467799999999999964 4 5778999844 78998888999
No 212
>2z3q_B Interleukin-15 receptor alpha chain; protein-protein complex, cytokine/cytokine receptor complex; 1.85A {Homo sapiens} SCOP: g.18.1.1 PDB: 2z3r_B 2ers_A
Probab=96.74 E-value=0.0012 Score=56.19 Aligned_cols=58 Identities=14% Similarity=0.337 Sum_probs=48.0
Q ss_pred ccCCCCCcCCCceEEecCCcccCCcEEEEEeCCCcEEe--CcceEEecCC-----CcccCCCCcccc
Q psy11954 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLI--GETRRVCGDG-----GKWNGTEPQCLF 424 (881)
Q Consensus 365 ~~C~~~~~~~nG~~~~~~~~~~~g~~~~~~C~~Gy~l~--G~~~~~C~~~-----G~Ws~~~P~C~~ 424 (881)
+.|+.|+..+|..+. -..|..|+.++|.|+.||.-. ++..+.|..+ .+|..+.-.|+.
T Consensus 6 ~~C~~Pp~~EHad~r--v~~y~v~s~vRYqC~~Gykrkagtsali~Ck~~~~~g~~~WT~P~LkCI~ 70 (107)
T 2z3q_B 6 ITCPPPMSVEHADIW--VKSYSLYSRERYICNSGFKRKAGTSSLTECVLNKATNVAHWTTPSLKCIR 70 (107)
T ss_dssp CBCCCCCCCTTEECC--CSCCBTTCEEECEECTTEEECTTCCCEEEEEEETTTTEEEECCCCCCEEE
T ss_pred ccCCCCCCcccccce--eEEeccCCEEEEecchhhhhhcCCCCccEEEecccCCcceecCCCeEEec
Confidence 899999999998874 346889999999999999765 4668899954 589987888983
No 213
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=96.17 E-value=0.006 Score=66.50 Aligned_cols=55 Identities=27% Similarity=0.532 Sum_probs=44.1
Q ss_pred cccCCCCCCCCCceEEEccCcccCCCEEEEEcCCCCEEc--CCCeeEeCCCCeecCC-----CCceeccCC
Q psy11954 803 AIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI--GPYLRKCMEDGSWSGD-----EPRCEKRFN 866 (881)
Q Consensus 803 ~v~C~~p~~~~nG~~~~~~~~~~~g~~v~f~C~~Gy~l~--G~~~~~C~~~G~Ws~~-----~P~C~~~~~ 866 (881)
...|+.|+.++||.+. ..|+|+|++.|+|. |+...+|.++|+|+.. +|.|+++|.
T Consensus 30 ~~~c~~p~~~~~g~~~---------~~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p~CG 91 (347)
T 4f4o_C 30 DDSCPKPPEIPKGYVE---------HMVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEAVCG 91 (347)
T ss_dssp ---CCCCCCBTTEEEE---------EEEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEECCS
T ss_pred CCcCCCCCCCCCceec---------eeeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccCCCC
Confidence 4579999999999764 24899999999874 7788999999999853 599999875
No 214
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=95.83 E-value=0.0096 Score=64.87 Aligned_cols=52 Identities=29% Similarity=0.650 Sum_probs=41.9
Q ss_pred ccCCCCCCCCCceEEecCCCeecCcEEEEEcCCCceec--CCceeeeccCCcccCC-----CCceeec
Q psy11954 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLE--GHARRLCLENGTWSSG-----LPTCKGN 723 (881)
Q Consensus 663 v~C~~p~~~~nG~~~~~~~~~~~g~~v~y~C~~Gy~L~--G~~~~~C~~~G~Ws~~-----~P~C~~~ 723 (881)
..|+.|+.+.||.+. ..|+|+|++.|+|. |+...+|.++|+|+.. +|.|+++
T Consensus 31 ~~c~~p~~~~~g~~~---------~~i~y~C~~~y~~~~~~~~~~~c~~~g~w~~~~~~~~lp~C~p~ 89 (347)
T 4f4o_C 31 DSCPKPPEIPKGYVE---------HMVRYHCQTYYKLRTAGDGVYTLDSNKQWTNKVTGEKLPECEAV 89 (347)
T ss_dssp --CCCCCCBTTEEEE---------EEEEEEECTTEEEECSSCSEEEECTTSCEEBTTTBTCCCEEEEC
T ss_pred CcCCCCCCCCCceec---------eeeEEcCCCccEeccCCCCCEEECCCCCEeCCCCCccCCCccCC
Confidence 368889999999764 24899999999874 6788999999999853 5899887
No 215
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=95.37 E-value=0.018 Score=55.09 Aligned_cols=123 Identities=15% Similarity=0.147 Sum_probs=80.7
Q ss_pred ceeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEcc--CCCCCCCCcccEEEEccCCC
Q psy11954 28 TNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTR--GCCGHQPLQDLEIRVGNSTD 105 (881)
Q Consensus 28 a~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr--~d~~~~~~~~~~i~v~~~~~ 105 (881)
-.-||...++++...+||+.++.|++. .....|..|++.+...|..|.|+.. .|-. -.=..+.|++|++..
T Consensus 30 w~vSS~k~g~gv~~L~D~~~~TyWqSd------g~qpH~I~i~f~k~v~i~~l~i~vd~~~DeS-YtPs~I~v~aG~~~~ 102 (171)
T 1jhj_A 30 WSLSSCKPGFGVDQLRDDNLETYWQSD------GSQPHLVNIQFRRKTTVKTLCIYADYKSDES-YTPSKISVRVGNNFH 102 (171)
T ss_dssp EEESCCBTTBSTHHHHSSCTTCCEECC------SSSSEEEEEEEEEEEEECEEEEEEEHHHHGG-GSEEEEEEEEESSTT
T ss_pred EEEEecCCCCChHHcCCCCCCeeEccC------CCCCeEEEEEECCCceEEEEEEEECCCCCCC-CCcEEEEEEEeCCcc
Confidence 456776666789999999999999754 2347899999999999999999975 2311 122357888888843
Q ss_pred CCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCC----CCCcceEEEEEEecC---cc
Q psy11954 106 LQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCA----RTLVGQNVFIQLVGV---EG 178 (881)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~gRyV~i~~~g~---~~ 178 (881)
.. +.+...++ ....+...+... .++..+||+|.+... .+
T Consensus 103 dL--------------~ei~~v~l--------------------~~p~Gwv~i~l~~~~~~~~~~~~IQI~I~~nhqnG~ 148 (171)
T 1jhj_A 103 NL--------------QEIRQLEL--------------------VEPSGWIHVPLTDNHKKPTRTFMIQIAVLANHQNGR 148 (171)
T ss_dssp SC--------------EEEEEEEC--------------------SSCEEEEEEECBCTTSSBEEEEEEEEEEEEEGGGCS
T ss_pred cc--------------eeEEEEEc--------------------cCCCEEEEEEeccCCCCceeEEEEEEEEeccCCCCC
Confidence 11 11111110 001122333331 257789999999742 22
Q ss_pred ceEeeEEEeeccc
Q psy11954 179 SLSLCEVEIFTTD 191 (881)
Q Consensus 179 ~l~l~EveV~g~~ 191 (881)
-.||.+|.|||.+
T Consensus 149 DthIR~ikI~G~~ 161 (171)
T 1jhj_A 149 DTHMRQIKIYTPV 161 (171)
T ss_dssp SCEECEEEEEEEC
T ss_pred ccEEEEEEEEecC
Confidence 4799999999975
No 216
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=95.11 E-value=0.099 Score=56.95 Aligned_cols=65 Identities=15% Similarity=0.074 Sum_probs=41.3
Q ss_pred ccccCCCCceeccCCCC-----------------------------CCCCCCcCCCCC---CCcCCCceeccCCC--CCC
Q psy11954 20 TNVALRRPTNQSSTIRG-----------------------------APSSNANDGELT---TVHDGKRCTETQKE--VSP 65 (881)
Q Consensus 20 ~nlA~~k~a~qSS~~~~-----------------------------~~a~~AvDG~~~---~~~~~~~c~~t~~~--~~p 65 (881)
.|||+||++.+|||=.. ..+++++|++.. +-|++..-.. ..+ .+=
T Consensus 24 ~N~a~~~~i~assTCG~~pe~yC~~~~~~~~~~~C~~Cda~~p~~~Hp~~~~~D~~~~~~~TwWQS~~~~~-~~~~~~~V 102 (375)
T 4aqt_A 24 VNAAFNVTVVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQQHLQHGAAFLTDYNNQADTTWWQSQTMLA-GVQYPNSI 102 (375)
T ss_dssp EETTTTCCCEESCCTTSSCEEEECCC----CCCCEEEECSSSTTTCCCGGGGSSCCCSSSCCCEECCCGGG-TCSSSCCE
T ss_pred hhhccCCeeeEecCCCCCCcCeEEecCCcccCCcCCccCCCChhhhCCHhheeccCCCCCCceEECCCccc-cCCCCcce
Confidence 89999999999998210 124467776542 3444331111 111 112
Q ss_pred cEEEEcCCeEEEEEEEEEcc
Q psy11954 66 WWQVDLLRPYPIRIVRITTR 85 (881)
Q Consensus 66 Ww~VDLg~~~~i~~V~i~nr 85 (881)
=+++||++.|.|.-|.|.-.
T Consensus 103 titLdL~~~f~~t~v~i~F~ 122 (375)
T 4aqt_A 103 NLTLHLGKAFDITYVRLKFH 122 (375)
T ss_dssp EEEEEEEEEEEEEEEEEEES
T ss_pred EEEEcCCCeEEEEEEEEEec
Confidence 36799999999999999864
No 217
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=94.97 E-value=0.059 Score=58.15 Aligned_cols=62 Identities=26% Similarity=0.598 Sum_probs=49.0
Q ss_pred cCCCCCCCCCceEEEc--cCcccCCCEEEEEcCCC-CEEcCC--------CeeEeCCCCeecCC-----CCceeccCC
Q psy11954 805 DCSHPGSIDNGRVIIM--NQTTTYNSAVEYHCVPQ-YQRIGP--------YLRKCMEDGSWSGD-----EPRCEKRFN 866 (881)
Q Consensus 805 ~C~~p~~~~nG~~~~~--~~~~~~g~~v~f~C~~G-y~l~G~--------~~~~C~~~G~Ws~~-----~P~C~~~~~ 866 (881)
.|+.|..+.||.+... .+...|++.+.|+|++. |.|.+. ...+|.++|.|... +|.|.+.+.
T Consensus 1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~~CG 78 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPVCG 78 (329)
T ss_dssp CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEECCS
T ss_pred CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCCCCC
Confidence 4999999999987743 34478999999999976 467764 67899999999863 688987754
No 218
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=94.28 E-value=0.076 Score=57.23 Aligned_cols=60 Identities=32% Similarity=0.815 Sum_probs=46.6
Q ss_pred cCCCCCCCCCceEEecC--CCeecCcEEEEEcCCC-ceecCC--------ceeeeccCCcccCC-----CCceeec
Q psy11954 664 DCGNPETVPNGGFTLTS--NATYYGTAVLYECDEN-YRLEGH--------ARRLCLENGTWSSG-----LPTCKGN 723 (881)
Q Consensus 664 ~C~~p~~~~nG~~~~~~--~~~~~g~~v~y~C~~G-y~L~G~--------~~~~C~~~G~Ws~~-----~P~C~~~ 723 (881)
.|+.|..+.||.+.... ..+.|++.++|.|++. |.|.+. ...+|..+|.|... .|.|.+.
T Consensus 1 ~c~~p~~~~~g~~~~~~~~~~~~~~~~~~y~c~~~~~~~~~~~~~~~~~~~~~~C~~~~~w~~~~~~~~~~~c~~~ 76 (329)
T 1md8_A 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPV 76 (329)
T ss_dssp CCCSCCCCTTEEEEESSSTTCCSTTCEEEEEECTTTEEECC--------CCEEEECTTSSEECSSCCSSCCCEEEC
T ss_pred CCCCCCCcCCCceeeecCCCCcccceEEEeecCCcceEeeccCCccccCCCceEECCCccccCccCccccCCCCCC
Confidence 49999999999987543 3456899999999986 467654 57899999999863 4677765
No 219
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=89.51 E-value=3.6 Score=47.07 Aligned_cols=33 Identities=18% Similarity=0.284 Sum_probs=23.6
Q ss_pred EEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCC
Q psy11954 67 WQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTD 105 (881)
Q Consensus 67 w~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~ 105 (881)
+.+||++.|.|.-|+|.-. -.++..+.|.-|.+
T Consensus 106 itl~l~~~~~~~~v~~~f~------s~rP~~~~ieks~d 138 (525)
T 4aqs_A 106 IQLDLEAEFHFTHLIMTFK------TFRPAAMLIERSSD 138 (525)
T ss_dssp EEEEEEEEEEEEEEEEEES------SCCCSEEEEEEESS
T ss_pred EEEcCCCeEEEEEEEEEEE------CCCCCeEEEEEecC
Confidence 3699999999999999752 23455566666644
No 220
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=89.32 E-value=0.43 Score=53.03 Aligned_cols=88 Identities=6% Similarity=0.010 Sum_probs=62.3
Q ss_pred CCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCCCCCCCccCCCCCCCCCCCcccceeeccCCCCCCCce
Q psy11954 63 VSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDLQKNPL 142 (881)
Q Consensus 63 ~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (881)
..+|.++||+++.+|+.|+|...-.- .+|+..|+|.+-++.. |++|
T Consensus 354 ~~~~~~i~l~~~~~fn~v~l~E~I~~-GQRV~~f~ve~~~~g~---------------W~~v------------------ 399 (443)
T 3gza_A 354 QKKSLTLKLGKEQSVNYCIIQENIKN-GERIRQYQIEAKVNGK---------------WQTV------------------ 399 (443)
T ss_dssp SSSEEEEEEEEEEEEEEEEEEECGGG-CCCEEEEEEEEEETTE---------------EEEE------------------
T ss_pred CCceEEEEcCCCceEeEEEEEecCCC-CCcccEEEEEEEeCCe---------------EEEE------------------
Confidence 56899999999999999999854321 2688888887754411 1111
Q ss_pred eeeccCccCCCceEEEeCCCCCcceEEEEEEecCccceEeeEEEeec
Q psy11954 143 CAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFT 189 (881)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~gRyV~i~~~g~~~~l~l~EveV~g 189 (881)
+.- .++ |....+.++ +++++-|||++........|+||+||-
T Consensus 400 -~~G-tTI--G~kRi~rf~-~V~a~~lRl~I~~sr~~p~I~~~gvy~ 441 (443)
T 3gza_A 400 -CKG-ESV--GHKRIEKFE-PVEATALRLTVSESIALPDIINFSAYS 441 (443)
T ss_dssp -EEE-SCC--TTCEEEEEE-EEEEEEEEEEEEEESSCCCEEEEEEEC
T ss_pred -Eee-eee--cceEEEecC-CeeeeEEEEEEEecCCCcEEEEEEEEE
Confidence 111 122 344444554 799999999999877788999999994
No 221
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=82.68 E-value=1.4 Score=48.25 Aligned_cols=48 Identities=21% Similarity=0.082 Sum_probs=30.9
Q ss_pred CCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEEccCCCCCCCCCccCCCCCCCCCCCccc
Q psy11954 64 SPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDL 127 (881)
Q Consensus 64 ~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (881)
+-=+.+||++.|.|.-|+|.-. +-.+...+.|.-|.+. +..|+|||=+
T Consensus 107 ~V~itLdL~~~f~~t~v~l~F~-----~spRP~~m~ierS~D~-----------G~tW~p~qyf 154 (403)
T 2y38_A 107 EVNVTLDLGQVFHVAYVLIKFA-----NSPRPDLWVLERSTDF-----------GHTYQPWQFF 154 (403)
T ss_dssp CCEEEEEEEEEEEEEEEEEEEC-----SSCCCSEEEEEEESSS-----------SSSEEEEEEE
T ss_pred cceeEEeCCCcEEEEEEEEEec-----CCCCCCeEEEEeccCC-----------CCCccceecc
Confidence 3446789999999999999852 1224455666666442 3467777543
No 222
>4dxt_A SUN domain-containing protein 2; beta-sandwich, LINC complex, structural protein; 2.22A {Homo sapiens} PDB: 3unp_A 4dxr_A* 4dxs_A* 4fi9_A
Probab=79.53 E-value=20 Score=34.97 Aligned_cols=118 Identities=12% Similarity=0.027 Sum_probs=71.8
Q ss_pred CCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccC------CCCCCCCcccEEEEccCCCCCCCCC
Q psy11954 38 PSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRG------CCGHQPLQDLEIRVGNSTDLQKNPL 111 (881)
Q Consensus 38 ~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~------d~~~~~~~~~~i~v~~~~~~~~~~~ 111 (881)
.|..|++.+.. .+.|-.... ...+|.|.|.+...|..|.|-.-. ..-...-+.|+|..-....
T Consensus 68 ~P~~~L~p~~~----pG~CW~f~g-~~g~l~I~Ls~~I~~~~VtieHi~~~~sp~~~~~SAPKdf~V~g~~~~~------ 136 (198)
T 4dxt_A 68 SPRVILQPDVH----PGNCWAFQG-PQGFAVVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDL------ 136 (198)
T ss_dssp CGGGGGSSCCS----TTCSEEEET-TCEEEEEEEEEEEEEEEEEEECCCGGGSGGGCCTTSBCEEEEEEESSSS------
T ss_pred CchheEcCCCC----CcceeecCC-CcceeeeecCCeEEEEEEEEEcCchhcccccCcCCCCcEEEEEEEcCCC------
Confidence 46667766643 344554443 678999999999999999998542 0112233456665443311
Q ss_pred ccCCCCCCCCCCCcccceeeccCCCCCCCceeeeccCccCCCceEEEeCCCCC--cceEEEEEEe---cCccceEeeEEE
Q psy11954 112 CAWFPGTLGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLEEGITKSFTCARTL--VGQNVFIQLV---GVEGSLSLCEVE 186 (881)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gRyV~i~~~---g~~~~l~l~Eve 186 (881)
.....+.+.+..........+|..+... .=|+|++++. |...+-.|.-|.
T Consensus 137 -------------------------~~~~~~Lg~f~Y~~~~~~~QtF~l~~~~~~~~~~V~l~i~SN~G~~~~TClYr~R 191 (198)
T 4dxt_A 137 -------------------------QQEGTLLGKFTYDQDGEPIQTFHFQAPTMATYQVVELRILTNWGHPEYTCIYRFR 191 (198)
T ss_dssp -------------------------CCCCEEEEEEECCTTSCSEEEEECSSCCSCCEEEEEEEECCBSSCSSEEEECEEE
T ss_pred -------------------------CCCcEEEEEEEECCCCCcceEEEeCCCCCcceeEEEEEEECCCCCCCcEEEEEEE
Confidence 0112233444443333345667765332 3588999988 544578999999
Q ss_pred eeccc
Q psy11954 187 IFTTD 191 (881)
Q Consensus 187 V~g~~ 191 (881)
|||.+
T Consensus 192 VhG~~ 196 (198)
T 4dxt_A 192 VHGEP 196 (198)
T ss_dssp EEEEC
T ss_pred EcCEe
Confidence 99975
No 223
>3nng_A Uncharacterized protein; F5_F8_TYPE_C domain, NESG, structural genomics, PSI-2, prote structure initiative; 2.18A {Bacteroides fragilis}
Probab=75.49 E-value=5.5 Score=34.94 Aligned_cols=65 Identities=25% Similarity=0.320 Sum_probs=45.9
Q ss_pred CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCC-CCCcccEEEEccCC
Q psy11954 37 APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGH-QPLQDLEIRVGNST 104 (881)
Q Consensus 37 ~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~-~~~~~~~i~v~~~~ 104 (881)
+++.+||||+.++.|-..-. ...-.=||---|-.+..+....++-...-.. -.|+.++|.|-...
T Consensus 37 yg~~laidge~nttwftwgv---~nagecww~t~lp~p~~ltgfsvtkqsaygssynlr~aeikvrkeg 102 (168)
T 3nng_A 37 YGAHLAIDGEINTTWFTWGV---ANAGECWWNTVLDRPVTLTGFSVTKQSAYGSGYNLRSAEIKVRKEG 102 (168)
T ss_dssp HCGGGGGSSCTTSCEEEECH---HHHSCCEEEEEEEEEEEEEEEEECCCSSSCGGGBCCEEEEEEEETT
T ss_pred ccceEEecccccceEEEEec---ccccceehhcccCCceeeeeeeEEeeeecccccccceeeEEEeecC
Confidence 45899999999999843211 1234569999999999999999985432222 35677888876553
No 224
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=75.31 E-value=4.3 Score=40.11 Aligned_cols=70 Identities=16% Similarity=0.091 Sum_probs=51.2
Q ss_pred eeccCCCCCCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEcc--CCCCCCCCcccEEEEccCCC
Q psy11954 29 NQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTR--GCCGHQPLQDLEIRVGNSTD 105 (881)
Q Consensus 29 ~qSS~~~~~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr--~d~~~~~~~~~~i~v~~~~~ 105 (881)
+-||.-.+..+....||+.++.|++. ..-.-|..|-+.....|..|.|+-- .|- .-.-..+.|++|++..
T Consensus 62 svSS~K~g~gV~~L~D~s~~TyWQSD------G~qPH~ItI~f~k~v~I~~L~iyvD~~~De-SYtPs~I~V~aG~~~~ 133 (221)
T 1gqp_A 62 KPSSFKLGNPVDFALDDNYDTFWQSD------GGQPHQLDIMFSKRMDICVMAIFFSMIADE-SYAPSLVKVYAGHSPS 133 (221)
T ss_dssp EESCCCTTCCGGGGSSSCTTCCEECC------SSSSEEEEEEEEEEEEECEEEEEEEHHHHG-GGSEEEEEEEEESSTT
T ss_pred EEecCCCcCCHHHhcCCCccceeccC------CCCCeEEEEEEcCCceEEEEEEEECCCCCC-CCCCEEEEEEEeCCcC
Confidence 45666566789999999999999753 2347799999999999999999842 121 1122467888888843
No 225
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted (beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL; 2.90A {Streptococcus pneumoniae}
Probab=74.51 E-value=0.63 Score=56.80 Aligned_cols=61 Identities=23% Similarity=0.233 Sum_probs=0.0
Q ss_pred CCCCCCcCCCCCCCcCCCceeccCCCCCCcEEEEcCCeEEEEEEEEEccCCCCCCCCcccEEEE
Q psy11954 37 APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGHQPLQDLEIRV 100 (881)
Q Consensus 37 ~~a~~AvDG~~~~~~~~~~c~~t~~~~~pWw~VDLg~~~~i~~V~i~nr~d~~~~~~~~~~i~v 100 (881)
..+.+|+||+.++.|...+- ....+.|+.|||++++.|+.++..-|.+-..-++..++|.|
T Consensus 1470 e~a~nAfDGn~sT~WHT~ws---~~~~Ph~ItIDLge~~tVsGf~YLPRQdg~NG~Ik~YeI~V 1530 (1531)
T 3ecq_A 1470 EGLANAFDGNLSSLWHTSWG---GGDVGKPATMVLKEATEITGLRYVPRGSGSNGNLRDVKLVV 1530 (1531)
T ss_dssp ----------------------------------------------------------------
T ss_pred ccHHhccCCCCCCcEecCCC---CCCCCeEEEEECCCceEEccEEEecCCCCCCCcEEEEEEEE
Confidence 47999999999999965431 12356799999999999999999999763334566666654
No 226
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=68.22 E-value=4.7 Score=44.27 Aligned_cols=80 Identities=15% Similarity=0.040 Sum_probs=45.1
Q ss_pred ccccCCCCcee---ccCCC--------------------------CCCCCCCcCCCC---CCCcCCCceeccCCCCCCcE
Q psy11954 20 TNVALRRPTNQ---SSTIR--------------------------GAPSSNANDGEL---TTVHDGKRCTETQKEVSPWW 67 (881)
Q Consensus 20 ~nlA~~k~a~q---SS~~~--------------------------~~~a~~AvDG~~---~~~~~~~~c~~t~~~~~pWw 67 (881)
.|||+++++.+ |||=. ...+..++|++. .+=|++..-.......+-=+
T Consensus 55 ~n~a~~~~v~~~~assTCG~~pe~yC~~~~~~~C~~~Cda~~p~~aHp~~~~tD~~~~~~~twWQS~~~~~~~~p~~V~i 134 (426)
T 3zyj_B 55 TDMTKYLKVKLDPPDITCGDPPETFCAMGNPYMCNNECDASTPELAHPPELMFDFEGRHPSTFWQSATWKEYPKPLQVNI 134 (426)
T ss_dssp EEGGGTCEEEEESGGGBSCSSCEECCCSSCTTCCCCEECSSSTTTCCCGGGGGSCC----CCCEEBCCCCSCSSCCCEEE
T ss_pred HhHhcCCeeeeeccCcccCCCccceeeccCCCcccCcccCCCccccCCHHHeecCCCCCCCceecCCcccCCCCccceeE
Confidence 89999998774 66611 122456677742 33444332111111123345
Q ss_pred EEEcCCeEEEE-EEEEEccCCCCCCCCcccEEEEccCCC
Q psy11954 68 QVDLLRPYPIR-IVRITTRGCCGHQPLQDLEIRVGNSTD 105 (881)
Q Consensus 68 ~VDLg~~~~i~-~V~i~nr~d~~~~~~~~~~i~v~~~~~ 105 (881)
++||++.|.|. .|+|.-. -.+...+.|.-|.+
T Consensus 135 tLdL~~~f~~t~~i~l~F~------spRP~am~ierS~D 167 (426)
T 3zyj_B 135 TLSWSKTIELTDNIVITFE------SGRPDQMILEKSLD 167 (426)
T ss_dssp EEEEEEEEEECSCEEEEES------SCCCSEEEEEEESS
T ss_pred EEcCCCcEEEEEEEEeecC------CCCCCeEEEEeccC
Confidence 79999999997 5777643 23455566666644
No 227
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=47.74 E-value=9.6 Score=33.85 Aligned_cols=31 Identities=26% Similarity=0.670 Sum_probs=22.0
Q ss_pred CCEEEEEcCCCC-----EEcCCCeeEeCCCCeecCC
Q psy11954 827 NSAVEYHCVPQY-----QRIGPYLRKCMEDGSWSGD 857 (881)
Q Consensus 827 g~~v~f~C~~Gy-----~l~G~~~~~C~~~G~Ws~~ 857 (881)
|+.|...|.+-| ...|...+.|.+||+|+..
T Consensus 63 G~~v~~pCP~~~~~~~~~~~g~vsR~C~~nG~W~~~ 98 (119)
T 1u34_A 63 GALVERPCPEYFNGIKYNTTRNAYRECLENGTWASR 98 (119)
T ss_dssp TCBCCCCSSCTTSSSCCCCCCCCCCBCCTTSCCCSC
T ss_pred CCEEEecCccccCCcccCCCCeeecCCCCCCcCCCC
Confidence 556666676543 3357789999999999753
No 228
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=39.75 E-value=13 Score=31.64 Aligned_cols=31 Identities=19% Similarity=0.379 Sum_probs=23.4
Q ss_pred CCCEEEEEcCCC---C--EEcCCCeeEeCCCCeecC
Q psy11954 826 YNSAVEYHCVPQ---Y--QRIGPYLRKCMEDGSWSG 856 (881)
Q Consensus 826 ~g~~v~f~C~~G---y--~l~G~~~~~C~~~G~Ws~ 856 (881)
-|++|...|..- | ...|..++.|.+||+|..
T Consensus 46 ~G~~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~ 81 (96)
T 4ers_A 46 ANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVR 81 (96)
T ss_dssp TTEEEEEECCTTSTTTTTSTTCEEEEEECTTSCBCB
T ss_pred CCCEEECCCChhhCcCccCCccceeeecCCCCeEeC
Confidence 477888889753 3 234668899999999964
No 229
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=39.00 E-value=15 Score=32.35 Aligned_cols=31 Identities=16% Similarity=0.359 Sum_probs=23.3
Q ss_pred CCCEEEEEcCCC---CEEcCCCeeEeCCCCeecC
Q psy11954 826 YNSAVEYHCVPQ---YQRIGPYLRKCMEDGSWSG 856 (881)
Q Consensus 826 ~g~~v~f~C~~G---y~l~G~~~~~C~~~G~Ws~ 856 (881)
-|.+|...|..- |.-.|...+.|.+||+|+.
T Consensus 62 ~G~~v~~~CP~~~~~f~~~g~v~R~C~~~G~W~~ 95 (115)
T 3n7s_A 62 AGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFR 95 (115)
T ss_dssp TTCEEEEECCSSSTTCCTTSEEEEEBCTTSCBCB
T ss_pred CCCEEEecCchhhcCCCCCCcEEeecCCCCCccc
Confidence 467888888653 3334778899999999974
No 230
>2xtt_A Protease inhibitor SGPI-1; hydrolase, catalytic mechanism, inhibition, in vitro evoluti; 0.93A {Schistocerca gregaria} PDB: 1kj0_A 2f91_B 2vu8_I 1kio_A
Probab=38.61 E-value=34 Score=23.33 Aligned_cols=30 Identities=27% Similarity=0.698 Sum_probs=21.5
Q ss_pred ccCCceeeccccCceeEEEEccCCeeecCCCccccccCC
Q psy11954 769 YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCS 807 (881)
Q Consensus 769 C~~Gy~l~G~~~~~~~~~~C~~~G~Ws~~~p~C~~v~C~ 807 (881)
|.+|..+..+. .+=+|..+|.|+ |....|+
T Consensus 4 C~pG~~~~~dC----NtC~C~~~G~W~-----CT~~~Cp 33 (36)
T 2xtt_A 4 CEPGQTKKQDC----NTCRCGSDGVWA-----CTRMGCP 33 (36)
T ss_dssp SCTTCEEEETT----EEEEECTTSCEE-----EECCCCC
T ss_pred CCCCCEEECCC----CccCCCCCCEEe-----eeCCcCC
Confidence 66777666554 788998899996 5555665
No 231
>3n7s_A Calcitonin gene-related peptide type 1 receptor; GPCR, class B GPCR, antagonist, olcegepant, telcagepant, MIG membrane protein; HET: 3N6 3N7; 2.10A {Homo sapiens} PDB: 3n7r_A* 3n7p_A* 3aqf_B
Probab=38.47 E-value=18 Score=31.84 Aligned_cols=31 Identities=19% Similarity=0.580 Sum_probs=22.8
Q ss_pred cCcEEEEEcCCC---ceecCCceeeeccCCcccC
Q psy11954 685 YGTAVLYECDEN---YRLEGHARRLCLENGTWSS 715 (881)
Q Consensus 685 ~g~~v~y~C~~G---y~L~G~~~~~C~~~G~Ws~ 715 (881)
.|.+|...|..- |.-.|...+.|.++|+|+.
T Consensus 62 ~G~~v~~~CP~~~~~f~~~g~v~R~C~~~G~W~~ 95 (115)
T 3n7s_A 62 AGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFR 95 (115)
T ss_dssp TTCEEEEECCSSSTTCCTTSEEEEEBCTTSCBCB
T ss_pred CCCEEEecCchhhcCCCCCCcEEeecCCCCCccc
Confidence 567777788653 3334678899999999984
No 232
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=34.70 E-value=8.3 Score=32.02 Aligned_cols=30 Identities=23% Similarity=0.562 Sum_probs=21.8
Q ss_pred CCEEEEEcCCCCE-----EcCCCeeEeCCCCeecC
Q psy11954 827 NSAVEYHCVPQYQ-----RIGPYLRKCMEDGSWSG 856 (881)
Q Consensus 827 g~~v~f~C~~Gy~-----l~G~~~~~C~~~G~Ws~ 856 (881)
|+++...|.+-|. ..|..++.|.+||+|+.
T Consensus 37 G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 71 (84)
T 2l27_A 37 GQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAA 71 (84)
T ss_dssp SBCCBCCCCSSBTTBCCCCSSCCBCCEETTTEECS
T ss_pred CCEEEecCchhhcCcccCcCCceecCCCCCCcCCC
Confidence 5566667766332 35778999999999985
No 233
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=33.94 E-value=27 Score=31.10 Aligned_cols=30 Identities=30% Similarity=0.585 Sum_probs=22.0
Q ss_pred cCcEEEEEcCCCc---e--ecCCceeeeccCCccc
Q psy11954 685 YGTAVLYECDENY---R--LEGHARRLCLENGTWS 714 (881)
Q Consensus 685 ~g~~v~y~C~~Gy---~--L~G~~~~~C~~~G~Ws 714 (881)
.|+.|...|...| . -.|..++.|.++|+|.
T Consensus 54 ~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~ 88 (122)
T 3c5t_A 54 PGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWL 88 (122)
T ss_dssp TTEEEEEECCTTSTTGGGCTTCEEEEEECTTSSBC
T ss_pred CCcEEEeeCcchhhCccccccceEecCCCCCCccc
Confidence 4667777887743 3 3566789999999994
No 234
>2l27_A Seven transmembrane helix receptor; CRF, ECD1, family B1, alpha helical CRF, membrane P peptide binding protein; NMR {Homo sapiens}
Probab=33.53 E-value=9.2 Score=31.74 Aligned_cols=30 Identities=30% Similarity=0.710 Sum_probs=20.1
Q ss_pred CcEEEEEcCCCce-----ecCCceeeeccCCcccC
Q psy11954 686 GTAVLYECDENYR-----LEGHARRLCLENGTWSS 715 (881)
Q Consensus 686 g~~v~y~C~~Gy~-----L~G~~~~~C~~~G~Ws~ 715 (881)
|+++...|.+-|. ..+..++.|.++|+|+.
T Consensus 37 G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W~~ 71 (84)
T 2l27_A 37 GQLVVRPCPAFFYGVRYNTTNNGYRECLANGSWAA 71 (84)
T ss_dssp SBCCBCCCCSSBTTBCCCCSSCCBCCEETTTEECS
T ss_pred CCEEEecCchhhcCcccCcCCceecCCCCCCcCCC
Confidence 4445555665332 34678899999999985
No 235
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=31.77 E-value=19 Score=32.66 Aligned_cols=30 Identities=30% Similarity=0.535 Sum_probs=23.6
Q ss_pred CCCEEEEEcCCCCE-----EcCCCeeEeCCCCeec
Q psy11954 826 YNSAVEYHCVPQYQ-----RIGPYLRKCMEDGSWS 855 (881)
Q Consensus 826 ~g~~v~f~C~~Gy~-----l~G~~~~~C~~~G~Ws 855 (881)
-|+.|...|.+-+. -.|...+.|.+||+|+
T Consensus 73 ~G~~v~~~CP~~~~~~~~~~~g~vsR~C~~dG~W~ 107 (135)
T 2qkh_A 73 PNATARASCPWYLPWHHHVAAGFVLRQCGSDGQWG 107 (135)
T ss_dssp TTEEEEEECCTTSTTHHHHTTCEEEEEECTTSCBC
T ss_pred CCCEEEecCchhhcCcccCCCceEeccCCCCCCCC
Confidence 36788888987543 2477789999999998
No 236
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=31.55 E-value=22 Score=31.39 Aligned_cols=33 Identities=27% Similarity=0.706 Sum_probs=23.8
Q ss_pred cCcEEEEEcCCCce----ecCCceeeeccCCcccCCCC
Q psy11954 685 YGTAVLYECDENYR----LEGHARRLCLENGTWSSGLP 718 (881)
Q Consensus 685 ~g~~v~y~C~~Gy~----L~G~~~~~C~~~G~Ws~~~P 718 (881)
.|+.+...|.+-|. ..|..++.|.++| |+...|
T Consensus 65 ~G~~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws~~~p 101 (116)
T 2x57_A 65 VGETVTVPCPKVFSNFYSKAGNISKNCTSDG-WSETFP 101 (116)
T ss_dssp TTCEEEEECCGGGGGGBSSCCEEEEEEETTE-ECCCBS
T ss_pred CCCEEEecCcccccCccCCCCeEEeeCCccc-CCCCCC
Confidence 46777778887542 3567889999999 986443
No 237
>3c5t_A Glucagon-like peptide 1 receptor; ligand-bound G protein-coupled receptor extracellular domain protein coupled receptor, glycoprotein, membrane; HET: 10M; 2.10A {Homo sapiens} PDB: 3c59_A* 3iol_A*
Probab=30.82 E-value=24 Score=31.46 Aligned_cols=29 Identities=28% Similarity=0.446 Sum_probs=22.3
Q ss_pred CCCEEEEEcCCCC---E--EcCCCeeEeCCCCee
Q psy11954 826 YNSAVEYHCVPQY---Q--RIGPYLRKCMEDGSW 854 (881)
Q Consensus 826 ~g~~v~f~C~~Gy---~--l~G~~~~~C~~~G~W 854 (881)
-|+.|...|.+-+ . -.|...+.|.+||+|
T Consensus 54 ~G~~v~~~CP~~~~~~~~~~~~~~~R~C~~~G~W 87 (122)
T 3c5t_A 54 PGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLW 87 (122)
T ss_dssp TTEEEEEECCTTSTTGGGCTTCEEEEEECTTSSB
T ss_pred CCcEEEeeCcchhhCccccccceEecCCCCCCcc
Confidence 3678888887654 3 346678999999999
No 238
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR, incretin, hormone-GPCR complex, extracellular domain, ligand binding domain, ECD; HET: QKH; 1.90A {Homo sapiens}
Probab=30.56 E-value=23 Score=32.17 Aligned_cols=30 Identities=20% Similarity=0.397 Sum_probs=23.0
Q ss_pred cCcEEEEEcCCCce-----ecCCceeeeccCCccc
Q psy11954 685 YGTAVLYECDENYR-----LEGHARRLCLENGTWS 714 (881)
Q Consensus 685 ~g~~v~y~C~~Gy~-----L~G~~~~~C~~~G~Ws 714 (881)
.|+.|...|.+-|. -.|..++.|.++|+|+
T Consensus 73 ~G~~v~~~CP~~~~~~~~~~~g~vsR~C~~dG~W~ 107 (135)
T 2qkh_A 73 PNATARASCPWYLPWHHHVAAGFVLRQCGSDGQWG 107 (135)
T ss_dssp TTEEEEEECCTTSTTHHHHTTCEEEEEECTTSCBC
T ss_pred CCCEEEecCchhhcCcccCCCceEeccCCCCCCCC
Confidence 46778888887543 3566889999999998
No 239
>4ers_A GL-R, glucagon receptor; class-B GPCR, FAB, glycosylation, extra-C immune system; HET: NAG; 2.64A {Homo sapiens}
Probab=29.93 E-value=29 Score=29.47 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=23.6
Q ss_pred ecCcEEEEEcCC---Cce--ecCCceeeeccCCcccC
Q psy11954 684 YYGTAVLYECDE---NYR--LEGHARRLCLENGTWSS 715 (881)
Q Consensus 684 ~~g~~v~y~C~~---Gy~--L~G~~~~~C~~~G~Ws~ 715 (881)
..|+++...|.. +|. ..|..++.|.++|+|..
T Consensus 45 ~~G~~v~~~CP~~~~~~~~~~~~~a~R~C~~~G~W~~ 81 (96)
T 4ers_A 45 PANTTANISCPWYLPWHHKVQHRFVFKRCGPDGQWVR 81 (96)
T ss_dssp ETTEEEEEECCTTSTTTTTSTTCEEEEEECTTSCBCB
T ss_pred CCCCEEECCCChhhCcCccCCccceeeecCCCCeEeC
Confidence 357788888875 332 34668899999999974
No 240
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=28.49 E-value=30 Score=29.99 Aligned_cols=33 Identities=33% Similarity=0.646 Sum_probs=23.5
Q ss_pred CCCEEEEEcCCCCEE------cCCCeeEeCCCCeecCCCC
Q psy11954 826 YNSAVEYHCVPQYQR------IGPYLRKCMEDGSWSGDEP 859 (881)
Q Consensus 826 ~g~~v~f~C~~Gy~l------~G~~~~~C~~~G~Ws~~~P 859 (881)
-|++|...|.+-|.. .|..++.|.+|| |+...|
T Consensus 53 ~G~~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws~~~~ 91 (106)
T 2jod_A 53 VGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFP 91 (106)
T ss_dssp TTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BCCCSS
T ss_pred CCCEEEecCcchhcCCCCcCcCCeEEecCCccc-CCCCCC
Confidence 367788888765432 246789999999 986544
No 241
>1u34_A CRFR2B, corticotropin releasing factor receptor 2; beta sheets and loops, signaling protein; NMR {Mus musculus} SCOP: g.76.1.1 PDB: 2jnd_A* 2jnc_A
Probab=26.78 E-value=18 Score=32.09 Aligned_cols=30 Identities=47% Similarity=0.816 Sum_probs=19.8
Q ss_pred CcEEEEEcCCCc-----eecCCceeeeccCCcccC
Q psy11954 686 GTAVLYECDENY-----RLEGHARRLCLENGTWSS 715 (881)
Q Consensus 686 g~~v~y~C~~Gy-----~L~G~~~~~C~~~G~Ws~ 715 (881)
|+.|...|..-| ...|..++.|.++|+|+.
T Consensus 63 G~~v~~pCP~~~~~~~~~~~g~vsR~C~~nG~W~~ 97 (119)
T 1u34_A 63 GALVERPCPEYFNGIKYNTTRNAYRECLENGTWAS 97 (119)
T ss_dssp TCBCCCCSSCTTSSSCCCCCCCCCCBCCTTSCCCS
T ss_pred CCEEEecCccccCCcccCCCCeeecCCCCCCcCCC
Confidence 344444555533 234678899999999975
No 242
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=26.26 E-value=19 Score=30.35 Aligned_cols=33 Identities=27% Similarity=0.505 Sum_probs=22.9
Q ss_pred CCCEEEEEcCCCCE----EcCCCeeEeCCCCeecCCCC
Q psy11954 826 YNSAVEYHCVPQYQ----RIGPYLRKCMEDGSWSGDEP 859 (881)
Q Consensus 826 ~g~~v~f~C~~Gy~----l~G~~~~~C~~~G~Ws~~~P 859 (881)
-|++|...|.+-|. ..|..++.|.+|| |+...|
T Consensus 39 ~G~~v~~~CP~~~~~~~~~~~~v~R~C~~~G-W~~~~~ 75 (92)
T 2xdg_A 39 SGEWVTLPCPDFFSHFSSESGAVKRDCTITG-WSEPFP 75 (92)
T ss_dssp TTEEEEECCCGGGGGTCSSCCCEEEEEETTE-ECCCBS
T ss_pred CCCEEEecCcchhccccccCCeEecCCCccc-CCCCcC
Confidence 36677777876543 2467789999999 876433
No 243
>2x57_A Vasoactive intestinal polypeptide receptor 2; G-protein coupled receptor, circadian rhythm, MALE reproduct hormone binding, growth, transducer; 2.10A {Homo sapiens}
Probab=26.19 E-value=23 Score=31.20 Aligned_cols=33 Identities=27% Similarity=0.648 Sum_probs=24.6
Q ss_pred CCCEEEEEcCCCCE----EcCCCeeEeCCCCeecCCCC
Q psy11954 826 YNSAVEYHCVPQYQ----RIGPYLRKCMEDGSWSGDEP 859 (881)
Q Consensus 826 ~g~~v~f~C~~Gy~----l~G~~~~~C~~~G~Ws~~~P 859 (881)
-|+.+...|.+-|. ..|...+.|.+|| |+...|
T Consensus 65 ~G~~v~~~CP~~~~~~~~~~g~v~R~C~~~G-Ws~~~p 101 (116)
T 2x57_A 65 VGETVTVPCPKVFSNFYSKAGNISKNCTSDG-WSETFP 101 (116)
T ss_dssp TTCEEEEECCGGGGGGBSSCCEEEEEEETTE-ECCCBS
T ss_pred CCCEEEecCcccccCccCCCCeEEeeCCccc-CCCCCC
Confidence 36788888886542 4577789999999 986543
No 244
>2jod_A Pituitary adenylate cyclase-activating polypeptide type I receptor; protein/peptide complex, signaling protein; NMR {Homo sapiens} SCOP: g.76.1.1
Probab=24.84 E-value=38 Score=29.30 Aligned_cols=33 Identities=42% Similarity=0.874 Sum_probs=21.6
Q ss_pred cCcEEEEEcCCCcee------cCCceeeeccCCcccCCCC
Q psy11954 685 YGTAVLYECDENYRL------EGHARRLCLENGTWSSGLP 718 (881)
Q Consensus 685 ~g~~v~y~C~~Gy~L------~G~~~~~C~~~G~Ws~~~P 718 (881)
.|++|...|.+-|.. .|..++.|+++| |+...|
T Consensus 53 ~G~~v~~~CP~~~~~~~~~~~~g~v~R~C~~~G-Ws~~~~ 91 (106)
T 2jod_A 53 VGEMVLVSCPELFRIFNPDQDMGVVSRNCTEDG-WSEPFP 91 (106)
T ss_dssp TTCCEEECCSCSSCCCSCCSCCSCEEECBCSSC-BCCCSS
T ss_pred CCCEEEecCcchhcCCCCcCcCCeEEecCCccc-CCCCCC
Confidence 355666667664422 346789999999 986543
No 245
>2xdg_A Growth hormone-releasing hormone receptor; signaling protein, membrane protein; 1.95A {Homo sapiens}
Probab=24.15 E-value=31 Score=29.06 Aligned_cols=32 Identities=28% Similarity=0.586 Sum_probs=21.7
Q ss_pred cCcEEEEEcCCCce----ecCCceeeeccCCcccCCC
Q psy11954 685 YGTAVLYECDENYR----LEGHARRLCLENGTWSSGL 717 (881)
Q Consensus 685 ~g~~v~y~C~~Gy~----L~G~~~~~C~~~G~Ws~~~ 717 (881)
.|+++...|..-|. ..|..++.|.++| |+...
T Consensus 39 ~G~~v~~~CP~~~~~~~~~~~~v~R~C~~~G-W~~~~ 74 (92)
T 2xdg_A 39 SGEWVTLPCPDFFSHFSSESGAVKRDCTITG-WSEPF 74 (92)
T ss_dssp TTEEEEECCCGGGGGTCSSCCCEEEEEETTE-ECCCB
T ss_pred CCCEEEecCcchhccccccCCeEecCCCccc-CCCCc
Confidence 35666667776443 2466789999999 87643
No 246
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=22.08 E-value=89 Score=25.20 Aligned_cols=54 Identities=19% Similarity=0.388 Sum_probs=30.8
Q ss_pred EEEEcCCCceeeCcee--eecCCCCCCCCCCceeeccCceecCcEEEEEcCCCcEEcCCCceee
Q psy11954 449 ATYSCEPGFILFGSNV--NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSC 510 (881)
Q Consensus 449 ~~y~C~~Gy~l~g~~~--~i~C~~p~~~~nG~~~~~~~~~~~gs~v~y~C~~Gy~L~G~~~~tC 510 (881)
....|..||.+.|..- ...|.....-.||.-.... |+ .+-.|.+||.+.+. .+|
T Consensus 26 y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~~C~n~~-----g~-y~C~C~~G~~g~~~--~~C 81 (82)
T 1emn_A 26 YRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVI-----GG-FECTCEEGFEPGPM--MTC 81 (82)
T ss_dssp CCEECCTTEEEETTEEEECCGGGTCCTTSSSCEEECS-----SS-EEECCSSSSCCCSS--SCC
T ss_pred EEEECCCCeECCCCccCCcccccCCCCCCCCEeECCC-----CC-EEeECCCCeEeCCC--Ccc
Confidence 4567999999877643 3356533233455332222 22 34568899987654 445
Done!