RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11954
(881 letters)
>2gsx_A Complement receptor type 2; SCR domain, CCP domain, sushi domain,
immune system; NMR {Homo sapiens}
Length = 951
Score = 249 bits (636), Expect = 4e-70
Identities = 124/659 (18%), Positives = 191/659 (28%), Gaps = 113/659 (17%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC-KEGFWTGVA 330
+ ++C P G+ + G ++++AC + G+ + C W
Sbjct: 63 EYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTR 122
Query: 331 PTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGA 389
++C L I +G T E + G
Sbjct: 123 LPTCV-------------------------SVFPLECPALPMIHNGHHTSENVGSIAPGL 157
Query: 390 VAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGR-RTGSV 448
Y+C Y L+GE C GKW+ P C C + G V R G
Sbjct: 158 SVTYSCESGYLLVGEKIINCLSSGKWSAVPPTCEEARCKSLGRFPNGKVKEPPILRVGVT 217
Query: 449 ATYSCEPGFILFGSNV-------------------NIDCGRLTAIPYGSISYLNETTY-L 488
A + C+ G+ L G I C I G +
Sbjct: 218 ANFFCDEGYRLQGPPSSRCVIAGQGVAWTKMPVCEEIFCPSPPPILNGRHIGNSLANVSY 277
Query: 489 GSEVLYSC------SRNYRLVGHPRRSCL----ESKVWSDTAPKCEGKATKDIKVCSNVA 538
GS V Y+C N+ L+G C ++ WS AP+CE
Sbjct: 278 GSIVTYTCDPDPEEGVNFILIGESTLRCTVDSQKTGTWSGPAPRCE-------------- 323
Query: 539 VDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILS 598
+ ++CP P + ++S + Y + TL +
Sbjct: 324 LSTSAVQCPHPQILRGRMVSGQKDRYTYN-----------DTVIFACMFGFTLKGSKQIR 372
Query: 599 VTGNDRLYGRTLIKTAD------------SASSVATYKIGALVKYRCERGYKVEGEPLST 646
+ + + + G +KY C GY + GE
Sbjct: 373 CNAQGTWEPSAPVCEKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQ 432
Query: 647 CEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRL 706
C G W+ VP+C C + V C E Y+L G +
Sbjct: 433 CTSEGVWTPPVPQCKVAACEATGRQLLT----KPQHQFVRPDVNSSCGEGYKLSGSVYQE 488
Query: 707 CLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKR 766
C W + CK + NG + T +C PG
Sbjct: 489 CQGTIPWFMEIRLCKEITCPPPPVI-YNGAHTGS------SLEDFPYGTTVTYTCNPG-- 539
Query: 767 FYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKA----IDCSHPGSIDNGRVIIMNQ 822
F L + T +RGTWSG P CK + CSH + ++
Sbjct: 540 -PERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEA 598
Query: 823 TTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIPGRSRRSPINSF 881
YN V + C + G +C D +W + P CEK + + P S
Sbjct: 599 PYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCEKETCQHVRQSLQELPAGSR 657
Score = 244 bits (623), Expect = 3e-68
Identities = 123/654 (18%), Positives = 181/654 (27%), Gaps = 155/654 (23%)
Query: 277 PANCGSPDR--HVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTC 333
C +P + V G++I Y+C G +LVG + C G WT P C
Sbjct: 387 EKECQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQC 446
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIY 393
+ C
Sbjct: 447 KV-----------------------------AACEATGRQLLTK----PQHQFVRPDVNS 473
Query: 394 ACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSVAT 450
+C E Y L G + C W C C PP I G T S G+ T
Sbjct: 474 SCGEGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFPYGTTVT 533
Query: 451 YSCEPG------FILFGSN-------------------------VNIDCGRLTAIPYGSI 479
Y+C PG F L G + + + C + I
Sbjct: 534 YTCNPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKI 593
Query: 480 SYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAV 539
S + V + C + L G + C W P CE
Sbjct: 594 SGKEAPYFYNDTVTFKCYSGFTLKGSSQIRCKADNTWDPEIPVCE--------------- 638
Query: 540 DRREIRCPEPTLPAHSILSVTGND----------RLYGRTLIKTADSASSVATYKI---- 585
+ C + + + + +L G D+ + + KI
Sbjct: 639 ---KETCQHVRQSLQELPAGSRVELVNTSCQDGYQLTGHAYQMCQDAENGIWFKKIPLCK 695
Query: 586 ----GALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEG 641
P + + + G V Y C++G+ + G
Sbjct: 696 VIHCHPPPVIVNGKHTGMMAE-------------------NFLYGNEVSYECDQGFYLLG 736
Query: 642 EP----LSTCEDTGSWSGSVPECI----YVDCGNPETVPNGGFTLTSNATYYGTAVLYEC 693
E S + GSWSG P+C+ C NPE T +A + V +C
Sbjct: 737 EKKLQCRSDSKGHGSWSGPSPQCLRSPPVTRCPNPEVKHGYKLNKTHSAYSHNDIVYVDC 796
Query: 694 DENYRLEGHARRLCLENGTWSSGLPTCKGNE--GHARRLCLENGTWSSGLPTCKGCKTPK 751
+ + + G C + TW G+PTC G NG + G
Sbjct: 797 NPGFIMNGSRVIRCHTDNTWVPGVPTCIKKAFIGCPPPPKTPNGNHTG------GNIARF 850
Query: 752 KSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGS 811
SC G + L CT GTWS P CK ++CS P
Sbjct: 851 SPGMSILYSCDQG---------YLLVGEA----LLLCTHEGTWSQPAPHCKEVNCSSPAD 897
Query: 812 IDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKR 864
+D + + + Y + V C Y G +C D W+ C R
Sbjct: 898 MDGIQKGLEPRKMYQYGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVCRSR 951
Score = 237 bits (605), Expect = 6e-66
Identities = 132/650 (20%), Positives = 194/650 (29%), Gaps = 137/650 (21%)
Query: 279 NCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTC-----KEGFWTGVAPT 332
+CGSP +N + +G+ I Y+C L+G + C +G W AP
Sbjct: 2 SCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPK 61
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAI 392
C+YF C + + G +T HG
Sbjct: 62 CEYFNKY-------------------------SSCPEPI-VPGGYKIRGSTPYRHGDSVT 95
Query: 393 YACHENYTLIGETRRVCGDGGKWNGTEPQCLFD----WCAEPPQISGGIVTTSGRRT--- 445
+AC N+++ G C W T C P I G T+ +
Sbjct: 96 FACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAP 155
Query: 446 GSVATYSCEPGFILFGSN-----------------VNIDCGRLTAIPYGSISYLNETTYL 488
G TYSCE G++L G C L P G + +
Sbjct: 156 GLSVTYSCESGYLLVGEKIINCLSSGKWSAVPPTCEEARCKSLGRFPNGKVKE-PPILRV 214
Query: 489 GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPE 548
G + C YRL G P C+ + EI CP
Sbjct: 215 GVTANFFCDEGYRLQGPPSSRCVIAGQGVAWTKMPV----------------CEEIFCPS 258
Query: 549 PTLPAH-SILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYG 607
P + + + + YG + T D + G L S L T + + G
Sbjct: 259 PPPILNGRHIGNSLANVSYGSIVTYTCDP-----DPEEGVNFILIGESTLRCTVDSQKTG 313
Query: 608 R--------------------TLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTC 647
+++ + Y V + C G+ ++G C
Sbjct: 314 TWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRC 373
Query: 648 EDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRL 706
G+W S P C +C P + NG + GT++ Y C+ Y L G
Sbjct: 374 NAQGTWEPSAPVCE-KECQAPPNILNGQKEDRHMVRFDPGTSIKYSCNPGYVLVGEESIQ 432
Query: 707 CLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKR 766
C G W+ +P CK C G P + + SC G
Sbjct: 433 CTSEGVWTPPVPQCK------VAACEATGRQLLTKPQHQFVR------PDVNSSCGEG-- 478
Query: 767 FYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-T 825
++L S + C W I CK I C P I NG +
Sbjct: 479 -------YKLSG----SVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTGSSLEDFP 527
Query: 826 YNSAVEYHCVPQYQRIGPY----------LRKCMEDGSWSGDEPRCEKRF 865
Y + V Y C P +R + E G+WSG P C+
Sbjct: 528 YGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCKLSL 577
Score = 226 bits (576), Expect = 4e-62
Identities = 122/648 (18%), Positives = 194/648 (29%), Gaps = 139/648 (21%)
Query: 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC---KEGFWTGVAPTC 333
A C S R N ++G T ++ C EG L G + C +G P C
Sbjct: 192 EARCKSLGRFPNGKVKEPPILRVGVTANFFCDEGYRLQGPPSSRCVIAGQGVAWTKMPVC 251
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGAVAI 392
+ + C I +G + ++G++
Sbjct: 252 E-----------------------------EIFCPSPPPILNGRHIGNSLANVSYGSIVT 282
Query: 393 YACHE------NYTLIGETRRVCGDGGKWNGT--------EPQCLFDWCAEPPQISGGIV 438
Y C N+ LIGE+ C + GT E C P + G +V
Sbjct: 283 YTCDPDPEEGVNFILIGESTLRCTVDSQKTGTWSGPAPRCELSTSAVQCPHPQILRGRMV 342
Query: 439 TTSGRR--TGSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSIS 480
+ R ++C GF L GS +C I G
Sbjct: 343 SGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEKECQAPPNILNGQKE 402
Query: 481 YLNETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAV 539
+ + G+ + YSC+ Y LVG C VW+ P+C+
Sbjct: 403 DRHMVRFDPGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCK--------------- 447
Query: 540 DRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD-----SASSVATYKIGALPTLPAH 594
C + + + + S S + +
Sbjct: 448 ---VAACEATGRQLLT----KPQHQFVRPDVNSSCGEGYKLSGSVYQECQGTIPWFMEIR 500
Query: 595 SILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG------YKVEGEPLSTC- 647
+T + A + SS+ + G V Y C G + + GE C
Sbjct: 501 LCKEITCPPP---PVIYNGAHTGSSLEDFPYGTTVTYTCNPGPERGVEFSLIGESTIRCT 557
Query: 648 ---EDTGSWSGSVPEC----IYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLE 700
++ G+WSG P C + V C + + +Y V ++C + L+
Sbjct: 558 SNDQERGTWSGPAPLCKLSLLAVQCSHVHIANGYKISGKEAPYFYNDTVTFKCYSGFTLK 617
Query: 701 GHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALS 760
G ++ C + TW +P C+ + + S
Sbjct: 618 GSSQIRCKADNTWDPEIPVCE-------------KETCQHVRQSLQELPAGSRVELVNTS 664
Query: 761 CLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIM 820
C G ++L + G W IP CK I C P I NG+ M
Sbjct: 665 CQDG---------YQLTGHA--YQMCQDAENGIWFKKIPLCKVIHCHPPPVIVNGKHTGM 713
Query: 821 NQTT-TYNSAVEYHCVPQYQRIGPYLRKCMED----GSWSGDEPRCEK 863
Y + V Y C + +G +C D GSWSG P+C +
Sbjct: 714 MAENFLYGNEVSYECDQGFYLLGEKKLQCRSDSKGHGSWSGPSPQCLR 761
Score = 225 bits (573), Expect = 1e-61
Identities = 118/554 (21%), Positives = 178/554 (32%), Gaps = 103/554 (18%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC----GDGGKWNGTEP 420
+ CG I +G ++ +T G V Y+C + LIGE +C G W+ P
Sbjct: 1 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 60
Query: 421 QCLFDW----CAEPPQISGGIVTTSGRRT-GSVATYSCEPGFILFGSNV----------- 464
+C + C EP G + S G T++C+ F + G+
Sbjct: 61 KCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGP 120
Query: 465 ----------NIDCGRLTAIPYGSISYLNETTYL-GSEVLYSCSRNYRLVGHPRRSCLES 513
++C L I G + N + G V YSC Y LVG +CL S
Sbjct: 121 TRLPTCVSVFPLECPALPMIHNGHHTSENVGSIAPGLSVTYSCESGYLLVGEKIINCLSS 180
Query: 514 KVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLY------- 566
WS P CE E RC + + R+
Sbjct: 181 GKWSAVPPTCE------------------EARCKSLGRFPNGKVKEPPILRVGVTANFFC 222
Query: 567 --GRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK 624
G L S +A + I + L GR +S+A
Sbjct: 223 DEGYRLQGPPSSRCVIAGQGVAWTKMPVCEEIFCPSPPPILNGRH------IGNSLANVS 276
Query: 625 IGALVKYRCER------GYKVEGEPLSTC----EDTGSWSGSVPE----CIYVDCGNPET 670
G++V Y C+ + + GE C + TG+WSG P V C +P+
Sbjct: 277 YGSIVTYTCDPDPEEGVNFILIGESTLRCTVDSQKTGTWSGPAPRCELSTSAVQCPHPQI 336
Query: 671 VPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRL 730
+ + + Y V++ C + L+G + C GTW P C+
Sbjct: 337 LRGRMVSGQKDRYTYNDTVIFACMFGFTLKGSKQIRCNAQGTWEPSAPVCEKECQAPPN- 395
Query: 731 CLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTK 790
+ NG P S+ SC PG Y G + CT
Sbjct: 396 -ILNGQKED---RHMVRFDPGTSIK---YSCNPG---YVLVG----------EESIQCTS 435
Query: 791 RGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCME 850
G W+ +P CK C G + Q V C Y+ G ++C
Sbjct: 436 EGVWTPPVPQCKVAACEATGRQLLTK----PQHQFVRPDVNSSCGEGYKLSGSVYQECQG 491
Query: 851 DGSWSGDEPRCEKR 864
W + C++
Sbjct: 492 TIPWFMEIRLCKEI 505
Score = 220 bits (561), Expect = 4e-60
Identities = 131/679 (19%), Positives = 190/679 (27%), Gaps = 143/679 (21%)
Query: 243 NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGST 302
NG ++ W + + C P + + T S G +
Sbjct: 105 NGNKSVWCQANN-MWGPTRLPTCVSVFPLECPALPMI-----HNGHHTSENVGSIAPGLS 158
Query: 303 ISYACPEGNMLVGSATRTCKE-GFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYE 361
++Y+C G +LVG C G W+ V PTC+
Sbjct: 159 VTYSCESGYLLVGEKIINCLSSGKWSAVPPTCEE-------------------------- 192
Query: 362 RLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC--GDGGKWNGTE 419
C L +G V E G A + C E Y L G C G
Sbjct: 193 ---ARCKSLGRFPNGKVK-EPPILRVGVTANFFCDEGYRLQGPPSSRCVIAGQGVAWTKM 248
Query: 420 PQCLFDWCAEPPQISGGIVTTSGRRT---GSVATYSCEP------GFILFGSNV------ 464
P C +C PP I G + GS+ TY+C+P FIL G +
Sbjct: 249 PVCEEIFCPSPPPILNGRHIGNSLANVSYGSIVTYTCDPDPEEGVNFILIGESTLRCTVD 308
Query: 465 -------------------NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGH 505
+ C + +S + V+++C + L G
Sbjct: 309 SQKTGTWSGPAPRCELSTSAVQCPHPQILRGRMVSGQKDRYTYNDTVIFACMFGFTLKGS 368
Query: 506 PRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRL 565
+ C W +AP CE K C P +
Sbjct: 369 KQIRCNAQGTWEPSAPVCE-------KEC-----------QAPPNILNGQKEDRHMVRFD 410
Query: 566 YGRTLI-------KTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSAS 618
G ++ S T + P +P + + R +
Sbjct: 411 PGTSIKYSCNPGYVLVGEESIQCTSEGVWTPPVPQCKVAACEATGRQLL----------T 460
Query: 619 SVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTL 678
+ V C GYK+ G C+ T W + C + C P + NG T
Sbjct: 461 KPQHQFVRPDVNSSCGEGYKLSGSVYQECQGTIPWFMEIRLCKEITCPPPPVIYNGAHTG 520
Query: 679 TSNATY-YGTAVLYECDE------NYRLEGHARRLCLEN----GTWSSGLPTCKGNEGHA 727
+S + YGT V Y C+ + L G + C N GTWS P CK
Sbjct: 521 SSLEDFPYGTTVTYTCNPGPERGVEFSLIGESTIRCTSNDQERGTWSGPAPLCK--LSLL 578
Query: 728 RRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRT 787
C + + K C G + +G S
Sbjct: 579 AVQCSHVHIANGYKISGKEAPYFYNDTVT--FKCYSG---FTLKG----------SSQIR 623
Query: 788 CTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRK 847
C TW IP C+ C H + V C YQ G +
Sbjct: 624 CKADNTWDPEIPVCEKETCQHVRQSLQELP-----AGSRVELVNTSCQDGYQLTGHAYQM 678
Query: 848 CM--EDGSWSGDEPRCEKR 864
C E+G W P C+
Sbjct: 679 CQDAENGIWFKKIPLCKVI 697
Score = 135 bits (341), Expect = 1e-32
Identities = 53/286 (18%), Positives = 82/286 (28%), Gaps = 56/286 (19%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGSATRTC-----KEG 324
I +C P VN G ++ G+ +SY C +G L+G C G
Sbjct: 691 IPLCKVIHCHPPPVIVNGKHTGMMAENFLYGNEVSYECDQGFYLLGEKKLQCRSDSKGHG 750
Query: 325 FWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTR 384
W+G +P C C E + +
Sbjct: 751 SWSGPSPQCLRSP-------------------------PVTRCPNPEVKHGYKLNKTHSA 785
Query: 385 TTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL---FDWCAEPPQISGGIVTTS 441
+H + C+ + + G C W P C+ F C PP+ G T
Sbjct: 786 YSHNDIVYVDCNPGFIMNGSRVIRCHTDNTWVPGVPTCIKKAFIGCPPPPKTPNGNHTGG 845
Query: 442 GRRT---GSVATYSCEPGFILFGSNVN-----------------IDCGRLTAIPYGSISY 481
G YSC+ G++L G + ++C +
Sbjct: 846 NIARFSPGMSILYSCDQGYLLVGEALLLCTHEGTWSQPAPHCKEVNCSSPADMDGIQKGL 905
Query: 482 LNETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGK 526
Y G+ V C Y L G P+ C W+ C +
Sbjct: 906 EPRKMYQYGAVVTLECEDGYMLEGSPQSQCQSDHQWNPPLAVCRSR 951
>1haq_A Complement factor H; immunology, glycoprotein, complement alternate
pathway, SCR, CCP; NMR {Homo sapiens} PDB: 3gau_A 3gav_A
3gaw_A 2qfh_A 2qfg_A 1hfh_A 2kms_A 1hfi_A 1hcc_A
Length = 1213
Score = 230 bits (586), Expect = 9e-63
Identities = 95/621 (15%), Positives = 160/621 (25%), Gaps = 97/621 (15%)
Query: 270 HWICQHNPANCGSPDRHVNTTFVGTVSTKL--GSTISYACPEGNMLVGSAT-RTCKEGFW 326
+ + + CG P TF T G Y C EG L+G R C W
Sbjct: 57 NPLRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGW 116
Query: 327 TGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTL----ET 382
T P C+ V C + E+G +
Sbjct: 117 TNDIPICEV-----------------------------VKCLPVTAPENGKIVSSAMEPD 147
Query: 383 TRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSG 442
G + C+ Y + G+ C D G W+ +P+C+ C P I+G ++
Sbjct: 148 REYHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVINGSPISQKI 207
Query: 443 RRT-GSVATYSCEPGFILFGSNVNI--------------DCGRLTAIPYGSISYLNETTY 487
Y C G+ + IP G S L
Sbjct: 208 IYKENERFQYKCNMGYEYSERGDAVCTESGWRPLPSCEEKSCDNPYIPNGDYSPLRIKHR 267
Query: 488 LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCP 547
G E+ Y C + + S W AP+C K + + +R P
Sbjct: 268 TGDEITYQCRNGFYPATRGNTAKCTSTGWIP-APRCTLKPCDYPDIKHG-GLYHENMRRP 325
Query: 548 EPTLPAHSILSVTGND--RLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRL 605
+ S ++ + + + L
Sbjct: 326 YFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYFPY---------- 375
Query: 606 YGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVP-ECIYVD 664
++ + + + G + C GY + + WS + +
Sbjct: 376 -----LENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVKTC 430
Query: 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLE--NGTWSSGLPTCKG 722
+ + NG + + Y+C Y + WS+ K
Sbjct: 431 SKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSIRCGKDGWSAQPTCIKS 490
Query: 723 NEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKV 782
+ N K T K C G +
Sbjct: 491 CDIP----VFMNA-------RTKNDFTWFKLNDTLDYECHDG---------YESNTG--- 527
Query: 783 SYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIG 842
S T + +P C +C P + +++ C P + +G
Sbjct: 528 STTGSIVCGYNGWSDLPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVG 587
Query: 843 PYLRKCMEDGSWSGDEPRCEK 863
P +C G S D P C++
Sbjct: 588 PNSVQCYHFG-LSPDLPICKE 607
Score = 212 bits (541), Expect = 4e-57
Identities = 102/625 (16%), Positives = 177/625 (28%), Gaps = 105/625 (16%)
Query: 270 HWICQHNPANCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTCKE--GFW 326
W Q +N + KL T+ Y C +G +T
Sbjct: 480 GWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIVCGYNG 539
Query: 327 TGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTT 386
P C +C + H + +
Sbjct: 540 WSDLPICY-----------------------------ERECELPKIDVHLVPDRKKDQYK 570
Query: 387 HGAVAIYACHENYTLIGETRRVCGDGGKWNGTEP-QCLFDWCAEPPQISGGIVTTSGRRT 445
G V ++C +T++G C G + C PP++ G V +
Sbjct: 571 VGEVLKFSCKPGFTIVGPNSVQCYHFGLSPDLPICKEQVQSCGPPPELLNGNVKEKTKEE 630
Query: 446 ---GSVATYSCEPGFILFGSN-----------------VNIDCGRLTAIPYGSISYLNET 485
V Y C P F++ G N CG + + +G +
Sbjct: 631 YGHSEVVEYYCNPRFLMKGPNKIQCVDGEWTTLPVCIVEESTCGDIPELEHGWAQLSSPP 690
Query: 486 TYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIR 545
Y G V ++CS ++ ++GH +C+ W+ P+C SN+ + ++
Sbjct: 691 YYYGDSVEFNCSESFTMIGHRSITCIHGV-WTQL-PQCVAIDKLKKCKSSNLIILEEHLK 748
Query: 546 C-PEPTLPAHSILSVTGNDRLYGRTLIK-TADSASSVATYKIGALPTLPAHSILSVTGND 603
E ++ G + I D + + +I P P
Sbjct: 749 NKKEFDHNSNIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQIQLCPPPP----------- 797
Query: 604 RLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYV 663
I + + ++ Y+ G V C+ Y ++ TC+D G W +
Sbjct: 798 ------QIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEEITCKD-GRWQSIPLCVEKI 850
Query: 664 DCGNPETVPNGGFTLTSN---ATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTC 720
C P + +G + + + +GT + Y C+ +R+ C S P C
Sbjct: 851 PCSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCYMGKWSSP--PQC 908
Query: 721 KGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQ 780
+ C S G + C G + G
Sbjct: 909 E------GLPCKSPPEISHG--VVAHMSDSYQYGEEVTYKCFEG---FGIDG-------- 949
Query: 781 KVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQ 839
C WS P+C DC S +N + + V Y C Y+
Sbjct: 950 --PAIAKCLG-EKWSH-PPSCIKTDCLSLPSFENAIPMGEKKDVYKAGEQVTYTCATYYK 1005
Query: 840 RIGPYLRKCMEDGSWSGDEPRCEKR 864
G C + W+G +
Sbjct: 1006 MDGASNVTC-INSRWTGRPTCRDTS 1029
Score = 210 bits (535), Expect = 2e-56
Identities = 105/616 (17%), Positives = 186/616 (30%), Gaps = 157/616 (25%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKL--GSTISYACPEGNMLVGSATRTCKEGFWTGV 329
IC+ +CG P +N + + Y C ++ G C +G WT +
Sbjct: 604 ICKEQVQSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQCVDGEWTTL 663
Query: 330 APTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGA 389
CG + +EHG L + +G
Sbjct: 664 PVCI----------------------------VEESTCGDIPELEHGWAQLSSPPYYYGD 695
Query: 390 VAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRTGSVA 449
+ C E++T+IG C G W PQC+ + + S I+ +
Sbjct: 696 SVEFNCSESFTMIGHRSITCIH-GVWTQL-PQCVAIDKLKKCKSSNLIILEEHLKNKKEF 753
Query: 450 TYSCEPGFILFGSN---------------------VNIDCGRLTAIPYGSISYLNETTYL 488
++ + G C IP
Sbjct: 754 DHNSNIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRD 813
Query: 489 GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPE 548
G +V C NY + +C + + W E +I C +
Sbjct: 814 GEKVSVLCQENYLIQEGEEITCKDGR-WQSIPLCVE------------------KIPCSQ 854
Query: 549 PTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGR 608
P H ++ + SS +Y G
Sbjct: 855 PPQIEHGTINSSR----------------SSQESYAHG---------------------- 876
Query: 609 TLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNP 668
+ +Y CE G+++ E +TC S P+C + C +P
Sbjct: 877 ----------TKLSYT--------CEGGFRISEENETTCYMGKWS--SPPQCEGLPCKSP 916
Query: 669 ETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHAR 728
+ +G S++ YG V Y+C E + ++G A W S P+C +
Sbjct: 917 PEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIA-KCLGEKW-SHPPSCI------K 968
Query: 729 RLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTC 788
CL ++ + +P K K+ + +C +++ TC
Sbjct: 969 TDCLSLPSFENAIPMG-EKKDVYKAGEQVTYTCATY---------YKMDGAS----NVTC 1014
Query: 789 TKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRK 847
W+G PTC+ C +P ++ N ++ + V Y C Y+ G
Sbjct: 1015 I-NSRWTGR-PTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVM 1072
Query: 848 CMEDGSWSGDEPRCEK 863
C+ +G+W+ + P+C+
Sbjct: 1073 CL-NGNWT-EPPQCKD 1086
Score = 205 bits (523), Expect = 8e-55
Identities = 115/641 (17%), Positives = 186/641 (29%), Gaps = 142/641 (22%)
Query: 273 CQHNPANCGSPDRHVNTTFVGTV-STKLGSTISYACPEGNMLVGSATRTCKEGFWTGVAP 331
C + CG + + G ++ + C E ++G + TC G WT + P
Sbjct: 666 CIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGHRSITCIHGVWTQL-P 724
Query: 332 TCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVA 391
C +D K + + +
Sbjct: 725 QCV-----------------------------AIDKLKKCKSSNLIIL--EEHLKNKKEF 753
Query: 392 IYACHENYTLIG--ETRRVCGDGGKWNGTEPQCLFD--WCAEPPQISGGIVTTSGR--RT 445
+ + Y G G+W+ + C PPQI T+ R
Sbjct: 754 DHNSNIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQIQLCPPPPQIPNSHNMTTTLNYRD 813
Query: 446 GSVATYSCEPGFILFGSN----------------VNIDCGRLTAIPYGSISYLN---ETT 486
G + C+ +++ I C + I +G+I+ E+
Sbjct: 814 GEKVSVLCQENYLIQEGEEITCKDGRWQSIPLCVEKIPCSQPPQIEHGTINSSRSSQESY 873
Query: 487 YLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRC 546
G+++ Y+C +R+ +C K S P+CE + C
Sbjct: 874 AHGTKLSYTCEGGFRISEENETTCYMGKWSS--PPQCE------------------GLPC 913
Query: 547 PEPTLPAHSILSVTGNDRLYG----------------RTLIKTADSASSVATYKIGALPT 590
P +H +++ + YG + S + +
Sbjct: 914 KSPPEISHGVVAHMSDSYQYGEEVTYKCFEGFGIDGPAIAKCLGEKWSHPPSCIKTDCLS 973
Query: 591 LPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDT 650
LP+ G YK G V Y C YK++G TC +
Sbjct: 974 LPSFENAIPMG----------------EKKDVYKAGEQVTYTCATYYKMDGASNVTCIN- 1016
Query: 651 GSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLE 709
W+G P C C NP TV N + Y G V Y+C Y + G +CL
Sbjct: 1017 SRWTGR-PTCRDTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL- 1074
Query: 710 NGTWSSGLPTCKGNEGHARRL-CLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFY 768
NG W+ P CK + G ++NG +S P S+ C Y
Sbjct: 1075 NGNWTE-PPQCKDSTGKCGPPPPIDNGDITS---FPLSVYAPASSVE---YQCQNL---Y 1124
Query: 769 YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT---- 824
G + TC G WS P C ++N + +
Sbjct: 1125 QLEG----------NKRITCRN-GQWSE-PPKCLHPCVISREIMENYNIALRWTAKQKLY 1172
Query: 825 -TYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKR 864
+VE+ C Y+ + P C KR
Sbjct: 1173 SRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR 1213
Score = 201 bits (512), Expect = 2e-53
Identities = 97/624 (15%), Positives = 147/624 (23%), Gaps = 114/624 (18%)
Query: 279 NCGSPDRHVNTTFVGTVSTK----LGSTISYACPEGNMLVGSATRTCKEGFWTGV--APT 332
+C NT + + G+ Y C G +G+ C++G W +
Sbjct: 2 DCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGEWVALNPLRK 61
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTL-ETTRTTHGAVA 391
CQ CG GT TL +G A
Sbjct: 62 CQK-----------------------------RPCGHPGDTPFGTFTLTGGNVFEYGVKA 92
Query: 392 IYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT------ 445
+Y C+E Y L+GE D W P C C G + +S
Sbjct: 93 VYTCNEGYQLLGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHF 152
Query: 446 GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSISYLNETTYLG 489
G + C G+ + G + + GS
Sbjct: 153 GQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVINGSPISQKIIYKEN 212
Query: 490 SEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEP 549
Y C+ Y C ES P CE K C N + +
Sbjct: 213 ERFQYKCNMGYEYSERGDAVCTES--GWRPLPSCEE------KSCDNPYIPNGDYSPLRI 264
Query: 550 TLPAHSILSVT---GNDRLYGRTLIKTADSASSVA---TYKIGALPTLPAHSILSVTGND 603
++ G K + A T K P + +
Sbjct: 265 KHRTGDEITYQCRNGFYPATRGNTAKCTSTGWIPAPRCTLKPCDYPDIKHGGLYHENMRR 324
Query: 604 RLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCE--DTGSWSGSVPECI 661
+ +G Y C+ ++ WS +VP
Sbjct: 325 PYF---------------PVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLR 369
Query: 662 YVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCK 721
+ NG G ++ C Y L + WS +
Sbjct: 370 KCYFP---YLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIR 426
Query: 722 GNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQK 781
+ +ENG + + C G Y +
Sbjct: 427 VKTCSKSSIDIENG-------FISESQYTYALKEKAKYQCKLG---YVTAD-------GE 469
Query: 782 VSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI 841
S + C K WS K N R N ++Y C Y+
Sbjct: 470 TSGSIRCGK-DGWSAQPTCIK---SCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESN 525
Query: 842 GPYLRKCMEDGS-WSGDEPRCEKR 864
+ G D P C +R
Sbjct: 526 TGSTTGSIVCGYNGWSDLPICYER 549
Score = 201 bits (511), Expect = 2e-53
Identities = 85/620 (13%), Positives = 152/620 (24%), Gaps = 113/620 (18%)
Query: 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQYF 336
+C SPD + + K Y C G C E W + P+C+
Sbjct: 189 EISCKSPDVINGSPISQKIIYKENERFQYKCNMGYEYSERGDAVCTESGWRPL-PSCEEK 247
Query: 337 QLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACH 396
+PN G + + G Y C
Sbjct: 248 SCDNPYIPN------------------------------GDYSPLRIKHRTGDEITYQCR 277
Query: 397 ENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRR------TGSVAT 450
+ W P+C C P GG+ + RR G +
Sbjct: 278 NGFYPATRGNTAKCTSTGWIPA-PRCTLKPCDYPDIKHGGLYHENMRRPYFPVAVGKYYS 336
Query: 451 YSCEPGFILFGSNVN----------------IDCGRLTAIPYGSISYLNETTYLGSEVLY 494
Y C+ F + + + G G +
Sbjct: 337 YYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLRKCYFPYLENGYNQNHGRKFVQGKSIDV 396
Query: 495 SCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAH 554
+C Y L WS T P+C R + +
Sbjct: 397 ACHPGYALPKAQTTVTCMENGWSPT-PRCI----------------RVKTCSKSSIDIEN 439
Query: 555 SILSVTGNDRLYGRTL---------IKTADSASSVATYKIGALPTLPAHSILSVTGNDRL 605
+S + +++ S+ K G +
Sbjct: 440 GFISESQYTYALKEKAKYQCKLGYVTADGETSGSIRCGKDGWSAQPTCIKSCDIPV---- 495
Query: 606 YGRTLIKTADSASSVATYKIGALVKYRCERGYKVEG-EPLSTCEDTGSWSGSVPECIYVD 664
A + + +K+ + Y C GY+ + + +P C +
Sbjct: 496 -----FMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIVCGYNGWSDLPICYERE 550
Query: 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNE 724
C P+ + + G + + C + + G C G + +
Sbjct: 551 CELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHFGLSPDLPICKEQVQ 610
Query: 725 GHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSY 784
L NG K + + C P F ++
Sbjct: 611 SCGPPPELLNGNVK---EKTKEEYGHSEVVE---YYCNPR---------FLMKG----PN 651
Query: 785 TRTCTKRGTWSGHIP-TCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGP 843
C G W+ + C +++G + + Y +VE++C + IG
Sbjct: 652 KIQCVD-GEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVEFNCSESFTMIGH 710
Query: 844 YLRKCMEDGSWSGDEPRCEK 863
C+ G W+ P+C
Sbjct: 711 RSITCI-HGVWTQL-PQCVA 728
Score = 198 bits (505), Expect = 1e-52
Identities = 103/662 (15%), Positives = 162/662 (24%), Gaps = 114/662 (17%)
Query: 240 NNYNGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKL 299
N + C L + + R +
Sbjct: 278 NGFYPATRGNTAKCTSTGWIPAPRCTLKPCDYPDIKHGGLYHENMRRPYFPV------AV 331
Query: 300 GSTISYACPEGNMLVGSATR---TCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLF 356
G SY C E + C + W+ P +
Sbjct: 332 GKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLR---------------------- 369
Query: 357 RESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWN 416
++E+G + G ACH Y L V W+
Sbjct: 370 ----------KCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWS 419
Query: 417 GTEP-QCLFDWCAEPPQISGGIVTTSGR--RTGSVATYSCEPGFILFGSNVN-------- 465
T + I G ++ S A Y C+ G++ +
Sbjct: 420 PTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSIRCGKD 479
Query: 466 --------IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES-KVW 516
I + L + Y C Y +
Sbjct: 480 GWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIVCGYNG 539
Query: 517 SDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKT--- 573
P C E C P + H + + G L +
Sbjct: 540 WSDLPICY------------------ERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKP 581
Query: 574 ---ADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVK 630
+SV Y G P LP + L+ + Y +V+
Sbjct: 582 GFTIVGPNSVQCYHFGLSPDLPICKEQVQSCGPPP---ELLNGNVKEKTKEEYGHSEVVE 638
Query: 631 YRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVL 690
Y C + ++G C D + V CG+ + +G L+S YYG +V
Sbjct: 639 YYCNPRFLMKGPNKIQCVDGEWTTLPVCIVEESTCGDIPELEHGWAQLSSPPYYYGDSVE 698
Query: 691 YECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTP 750
+ C E++ + GH C+ +G W+ LP C + SS L +
Sbjct: 699 FNCSESFTMIGHRSITCI-HGVWTQ-LPQCV-------AIDKLKKCKSSNLIILEEHLKN 749
Query: 751 KKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKA--IDCSH 808
KK + +R + + + T G W + A C
Sbjct: 750 KKEFD------------HNSNIRYRCRGKE--GWIHTVCINGRWDPEVNCSMAQIQLCPP 795
Query: 809 PGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSG 868
P I N + V C Y C +DG W EK S
Sbjct: 796 PPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEEITC-KDGRWQSIPLCVEKIPCSQ 854
Query: 869 IP 870
P
Sbjct: 855 PP 856
Score = 183 bits (466), Expect = 1e-47
Identities = 93/484 (19%), Positives = 151/484 (31%), Gaps = 93/484 (19%)
Query: 272 ICQHNPANCGSPDRHVNTTFVG-TVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGVA 330
C P + N+ + T++ + G +S C E ++ TCK+G W +
Sbjct: 785 CSMAQIQLCPPPPQIPNSHNMTTTLNYRDGEKVSVLCQENYLIQEGEEITCKDGRWQSIP 844
Query: 331 PTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLET---TRTTH 387
+ + C + IEHGT+ H
Sbjct: 845 LCVE-----------------------------KIPCSQPPQIEHGTINSSRSSQESYAH 875
Query: 388 GAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT-- 445
G Y C + + E C G + PQC C PP+IS G+V
Sbjct: 876 GTKLSYTCEGGFRISEENETTCYMGKWS--SPPQCEGLPCKSPPEISHGVVAHMSDSYQY 933
Query: 446 GSVATYSCEPGFILFGSNV---------------NIDCGRLTAIPYGSISYLNETTY-LG 489
G TY C GF + G + DC L + + Y G
Sbjct: 934 GEEVTYKCFEGFGIDGPAIAKCLGEKWSHPPSCIKTDCLSLPSFENAIPMGEKKDVYKAG 993
Query: 490 SEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEP 549
+V Y+C+ Y++ G +C+ S+ W+ + C P
Sbjct: 994 EQVTYTCATYYKMDGASNVTCINSR-WTGRPTCRD-------TSC-----------VNPP 1034
Query: 550 TLPAHSILSVTGNDRLYGRTLIKT-----ADSASSVATYKIG---ALPTLPAHSILSVTG 601
T+ I+S + G + G P +
Sbjct: 1035 TVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKDSTGKCGPP 1094
Query: 602 NDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECI 661
G ++ ++ Y + V+Y+C+ Y++EG TC + G WS P+C+
Sbjct: 1095 PPIDNGDI------TSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRN-GQWSE-PPKCL 1146
Query: 662 YVDCGNPETVPNGGFTLTSNAT-----YYGTAVLYECDENYRLEGHARRLCLENGTWSSG 716
+ + E + N L A G +V + C YRL + L
Sbjct: 1147 HPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLE 1206
Query: 717 LPTC 720
PTC
Sbjct: 1207 YPTC 1210
Score = 178 bits (452), Expect = 5e-46
Identities = 84/602 (13%), Positives = 148/602 (24%), Gaps = 110/602 (18%)
Query: 296 STKLGSTISYACPEGNMLVGSATR-TCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSK 354
G +I AC G L + T TC E W+ P C
Sbjct: 387 KFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPT-PRC--------------------- 424
Query: 355 LFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGK 414
R+ IE+G ++ A Y C Y GK
Sbjct: 425 ------IRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSIRCGK 478
Query: 415 WNGTEPQCLFDWCAEPPQISGGIVTTSGR-RTGSVATYSCEPGFILFGSN---------- 463
+ C P ++ + Y C G+ +
Sbjct: 479 DGWSAQPTCIKSCDIPVFMNARTKNDFTWFKLNDTLDYECHDGYESNTGSTTGSIVCGYN 538
Query: 464 --------VNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKV 515
+C + + +G + +SC + +VG C
Sbjct: 539 GWSDLPICYERECELPKIDVHLVPDRKKDQYKVGEVLKFSCKPGFTIVGPNSVQCYHFG- 597
Query: 516 WSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAH-SILSVTGND--RLYGRTLIK 572
S P C+ + + ++ H ++ N + G I+
Sbjct: 598 LSPDLPICKEQV---QSCGPPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQ 654
Query: 573 TAD-----SASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGA 627
D + H ++ Y G
Sbjct: 655 CVDGEWTTLPVCIVEESTCGDIPELEHGWAQLSSP-------------------PYYYGD 695
Query: 628 LVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGT 687
V++ C + + G TC G W+ +P+C+ +D N +
Sbjct: 696 SVEFNCSESFTMIGHRSITCIH-GVWT-QLPQCVAIDKLKKCKSSNL--IILEEHLKNKK 751
Query: 688 AVLYECDENYRLEGHAR--RLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCK 745
+ + YR G NG W + +LC +
Sbjct: 752 EFDHNSNIRYRCRGKEGWIHTVCINGRWDPEVNCSMAQ----IQLCPPPPQIPNSHNMTT 807
Query: 746 GCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAID 805
+ ++ C Y + TC G W + I
Sbjct: 808 TLNYR--DGEKVSVLCQEN---YLIQE----------GEEITCKD-GRWQSIPLCVEKIP 851
Query: 806 CSHPGSIDNGRVIIMN---QTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCE 862
CS P I++G + ++ + + + Y C ++ C S P+CE
Sbjct: 852 CSQPPQIEHGTINSSRSSQESYAHGTKLSYTCEGGFRISEENETTCYMGKWSS--PPQCE 909
Query: 863 KR 864
Sbjct: 910 GL 911
Score = 171 bits (433), Expect = 1e-43
Identities = 95/623 (15%), Positives = 160/623 (25%), Gaps = 118/623 (18%)
Query: 279 NCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQYFQL 338
+C +P + + G I+Y C G AP C
Sbjct: 248 SCDNPYIPNGDYSPLRIKHRTGDEITYQCRNGFYPATRGNTAKCTSTGWIPAPRCTLKPC 307
Query: 339 QPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHEN 398
D+ + LY H + G Y C E+
Sbjct: 308 DYPDIKHGGLY-------------------------HENMRRPYFPVAVGKYYSYYCDEH 342
Query: 399 YTLIGETR--RVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT--GSVATYSCE 454
+ + + W+ P P + G GR+ G +C
Sbjct: 343 FETPSGSYWDHIHCTQDGWSPAVPCLR---KCYFPYLENGYNQNHGRKFVQGKSIDVACH 399
Query: 455 PGFILFGSNVNI------------------DCGRLTAIPYGSISYLNETTYLGSEVLYSC 496
PG+ L + + I G IS T L + Y C
Sbjct: 400 PGYALPKAQTTVTCMENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQC 459
Query: 497 SRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSI 556
Y + +A IK C + +
Sbjct: 460 KLGYVTADGETSGSIRCGKDGWSAQPTC------IKSCDIPVFMNARTKNDFTWFKLNDT 513
Query: 557 LSVT--------GNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGR 608
L S + + LP + H + +
Sbjct: 514 LDYECHDGYESNTGSTTGSIVCGYNGWSDLPICYERECELPKIDVHLVPDRKKD------ 567
Query: 609 TLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPEC--IYVDCG 666
YK+G ++K+ C+ G+ + G C G S +P C CG
Sbjct: 568 -------------QYKVGEVLKFSCKPGFTIVGPNSVQCYHFG-LSPDLPICKEQVQSCG 613
Query: 667 NPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEG 725
P + NG + Y + V Y C+ + ++G + C+ +G W++
Sbjct: 614 PPPELLNGNVKEKTKEEYGHSEVVEYYCNPRFLMKGPNKIQCV-DGEWTTLPVCIVEEST 672
Query: 726 HARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYT 785
LE+G + P +C + G +
Sbjct: 673 CGDIPELEHGW-------AQLSSPPYYYGDSVEFNCSES---FTMIG----------HRS 712
Query: 786 RTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT----TYNSAVEYHCVPQYQRI 841
TC G W+ +P C AID N ++ + +NS + Y C + I
Sbjct: 713 ITCI-HGVWT-QLPQCVAIDKLKKCKSSNLIILEEHLKNKKEFDHNSNIRYRCRGKEGWI 770
Query: 842 GPYLRKCMEDGSWSGDEPRCEKR 864
+G W + +
Sbjct: 771 ----HTVCINGRWDPEVNCSMAQ 789
Score = 161 bits (407), Expect = 1e-40
Identities = 74/520 (14%), Positives = 138/520 (26%), Gaps = 103/520 (19%)
Query: 366 DCGKLEHIEHGTV---TLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQC 422
DC +L + + + G AIY C Y +G VC G W P
Sbjct: 2 DCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGE-WVALNPLR 60
Query: 423 LFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYL 482
C+ CG P+G+ +
Sbjct: 61 -----------------------------KCQK----------RPCGHPGDTPFGTFTLT 81
Query: 483 NETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDR 541
+ G + +Y+C+ Y+L+G ++ W++ P CE
Sbjct: 82 GGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICE----------------- 124
Query: 542 REIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTG 601
++C T P + + + + + + + + +
Sbjct: 125 -VVKCLPVTAPENGKIVSSAME-------PDREYHFGQAVRFVCNSGYKIEGDEEMHCSD 176
Query: 602 N-----------DRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDT 650
+ + + S YK +Y+C GY+ + C ++
Sbjct: 177 DGFWSKEKPKCVEISCKSPDVINGSPISQKIIYKENERFQYKCNMGYEYSERGDAVCTES 236
Query: 651 GSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLEN 710
G +P C C NP +PNG ++ G + Y+C + +
Sbjct: 237 GWRP--LPSCEEKSCDNPY-IPNGDYSPLRIKHRTGDEITYQCRNGFYPATRGNTAKCTS 293
Query: 711 GTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYH 770
W P C +++G + P + C
Sbjct: 294 TGWIPA-PRCTLK--PCDYPDIKHGGLYH--ENMRRPYFPVAVGKYYSYYCDEHFETPSG 348
Query: 771 RGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAV 830
+ TQ WS +P + ++NG + ++
Sbjct: 349 SYWDHIHCTQ-----------DGWSPAVPCLRKCYF---PYLENGYNQNHGRKFVQGKSI 394
Query: 831 EYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIP 870
+ C P Y + WS PRC +
Sbjct: 395 DVACHPGYALPKAQTTVTCMENGWS-PTPRCIRVKTCSKS 433
Score = 135 bits (341), Expect = 1e-32
Identities = 77/442 (17%), Positives = 125/442 (28%), Gaps = 82/442 (18%)
Query: 467 DCGRLTAIPYGSI---SYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSD-TAPK 522
DC L I S+ ++T G++ +Y C YR +G+ C + + + K
Sbjct: 2 DCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNVIMVCRKGEWVALNPLRK 61
Query: 523 CEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVT-GNDRLYGRTLIKTADSASSVA 581
C+ + C P ++T GN YG A
Sbjct: 62 CQ------------------KRPCGHPGDTPFGTFTLTGGNVFEYG-----------VKA 92
Query: 582 TYKIGALPTLPAHSILSVTGNDRLYGRTLI----------------KTADSASSVATYKI 625
Y L D I + + Y
Sbjct: 93 VYTCNEGYQLLGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHF 152
Query: 626 GALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYY 685
G V++ C GYK+EG+ C D G WS P+C+ + C +P+ V NG
Sbjct: 153 GQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPD-VINGSPISQKIIYKE 211
Query: 686 GTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCK 745
Y+C+ Y +C E+G LP+C+ E + NG +S
Sbjct: 212 NERFQYKCNMGYEYSERGDAVCTESGWRP--LPSCE--EKSCDNPYIPNGDYSP------ 261
Query: 746 GCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAID 805
+ ++ C G +Y W P C
Sbjct: 262 -LRIKHRTGDEITYQCRNG---FYPAT----------RGNTAKCTSTGWI-PAPRCTLKP 306
Query: 806 CSHPGSIDNGRVIIMNQ----TTTYNSAVEYHCVPQYQRIGPYLRKCM--EDGSWSGDEP 859
C +P G + Y+C ++ + WS P
Sbjct: 307 CDYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVP 366
Query: 860 RCEKRFNSGIPGRSRRSPINSF 881
K + + ++ F
Sbjct: 367 CLRKCYFPYLENGYNQNHGRKF 388
>2q7z_A Complement receptor type 1; SCR domain, blood group antigen,
complement pathway, glycoprotein, immune response,
innate immunity, membrane; NMR {Homo sapiens}
Length = 1931
Score = 229 bits (584), Expect = 3e-62
Identities = 128/667 (19%), Positives = 206/667 (30%), Gaps = 105/667 (15%)
Query: 243 NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVST--KLG 300
G + + G +W++ IC CG P N F+ T G
Sbjct: 97 IGSSSATCIISGDTVIWDNETP-------ICD--RIPCGLPPTITNGDFISTNRENFHYG 147
Query: 301 STISYACPEGN------MLVGSATRTC-----KEGFWTGVAPTCQYFQLQPMDVPNLVLY 349
S ++Y C G+ LVG + C + G W+G AP C
Sbjct: 148 SVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCII-------------- 193
Query: 350 LFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIGETRRV 408
+ ++E+G + + + V + C + + G R
Sbjct: 194 ---------------PNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVK 238
Query: 409 CGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT--GSVATYSCEPGFILFGSNVN- 465
C KW P C P + G YSCEPG+ L G+
Sbjct: 239 CQALNKWEPELPSCSRVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMR 298
Query: 466 ----------------IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRS 509
C LG++V + C ++L G
Sbjct: 299 CTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGFQLKGSSASY 358
Query: 510 CLES---KVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLY 566
C+ + +W+ + P CE V N P P ++ T +
Sbjct: 359 CVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRH----TGKPLEVFPFGKAVNYTCDPHPD 414
Query: 567 GRTLIKTADSASSVATYKI-------GALPTLPAHSILSVTGNDRLYGRTLIKTADSASS 619
T ++ T P + + ++
Sbjct: 415 RGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLK------TQTN 468
Query: 620 VATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT 679
+ + IG +KY C Y + TC D WS C C P NG +
Sbjct: 469 ASDFPIGTSLKYECRPEYYGRPFSI-TCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI 527
Query: 680 SNATYYGTAVLYECDENYRLEGHARRLCLENGTWS--SGLPTCKGNEGHARRLCLENGTW 737
++ G+ + Y C +RL GH+ C+ +G + S P + NG +
Sbjct: 528 TD-IQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQRIPCGLPPTIANGDF 586
Query: 738 SSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGH 797
S T + +T C PG R +F L + T + G WSG
Sbjct: 587 IS---TNRENFHYGSVVT---YRCNPG---SGGRKVFELVGEPSIYCTSNDDQVGIWSGP 637
Query: 798 IPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSG 856
P C + P +++NG ++ N++ + N VE+ C P + GP KC W
Sbjct: 638 APQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEP 697
Query: 857 DEPRCEK 863
+ P C +
Sbjct: 698 ELPSCSR 704
Score = 223 bits (568), Expect = 3e-60
Identities = 130/657 (19%), Positives = 195/657 (29%), Gaps = 145/657 (22%)
Query: 280 CGSPDRHVNTTFVGTVST---KLGSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQYF 336
C +P+ +G+ ++Y C G + K WTG C+
Sbjct: 2 CNAPEWLPFARPTNLTDEFEFPIGTYLNYECRPGYSGRPFSIICLKNSVWTGAKDRCRR- 60
Query: 337 QLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACH 396
C +G V + G+ Y+C
Sbjct: 61 ----------------------------KSCRNPPDPVNGMVHV-IKGIQFGSQIKYSCT 91
Query: 397 ENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSVAT 450
+ Y LIG + C GD W+ P C C PP I+ G ++ R GSV T
Sbjct: 92 KGYRLIGSSSATCIISGDTVIWDNETPICDRIPCGLPPTITNGDFISTNRENFHYGSVVT 151
Query: 451 YSCEPG------FILFGSN---------------------VNIDCGRLTAIPYGSISYLN 483
Y C PG F L G + + + G + N
Sbjct: 152 YRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDN 211
Query: 484 ETTY-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRR 542
+ + L V + C + + G R C W P C +VC
Sbjct: 212 RSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCS-------RVC-------- 256
Query: 543 EIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGN 602
P P + ++ G Y L + + T
Sbjct: 257 ---QPPPDVLHAERTQRDKDNFSPG-----------QEVFYSCEPGYDLRGAASMRCTPQ 302
Query: 603 DRLYGRTLIKTADSASSV------------ATYKIGALVKYRCERGYKVEGEPLSTCEDT 650
S ++GA V + C+ G++++G S C
Sbjct: 303 GDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGFQLKGSSASYCVLA 362
Query: 651 GS---WSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECD------ENYRLE 700
G W+ SVP C + C +P +PNG T + +G AV Y CD ++ L
Sbjct: 363 GMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLI 422
Query: 701 GHARRLCLE----NGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTR 756
G + C NG WSS P C C + + + T
Sbjct: 423 GESTIRCTSDPQGNGVWSSPAPRCG-----ILGHCQAPDHFLFAKLKTQTNASDFPIGTS 477
Query: 757 PALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGR 816
C P YY R ++ TC WS CK C P NG
Sbjct: 478 LKYECRPE---YYGRP-----------FSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGM 523
Query: 817 VIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGS---WSGDEPRCEKRFNSGIP 870
V ++ S + Y C ++ IG +C+ G+ WS P C++ P
Sbjct: 524 VHVIT-DIQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQRIPCGLPP 579
Score = 220 bits (561), Expect = 2e-59
Identities = 128/673 (19%), Positives = 203/673 (30%), Gaps = 130/673 (19%)
Query: 248 CVVLDGGRGWLWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYAC 307
C G G + + + T + +G++++Y C
Sbjct: 1329 CTSDPHGNGVWSSPAPRCE---LSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLNYEC 1385
Query: 308 PEGNMLVGSATRTCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDC 367
G + + W+ V C+ C
Sbjct: 1386 RPGYFGKMFSISCLENLVWSSVEDNCRR-----------------------------KSC 1416
Query: 368 GKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQCLF 424
G +G V + T T G+ Y+C+E + LIG C G+ W+ P C
Sbjct: 1417 GPPPEPFNGMVHINTD-TQFGSTVNYSCNEGFRLIGSPSTTCLVSGNNVTWDKKAPICEI 1475
Query: 425 DWCAEPPQISGGIVTTSGRRT---GSVATYSCEPG------FILFGSN------------ 463
C PP IS G ++ R + G+V TY C G F L G
Sbjct: 1476 ISCEPPPTISNGDFYSNNRTSFHNGTVVTYQCHTGPDGEQLFELVGERSIYCTSKDDQVG 1535
Query: 464 ---------VNIDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLES 513
++ + + N + + L + + C + +VG C +
Sbjct: 1536 VWSSPPPRCISTNKCTAPEVENAIRVPGNRSFFSLTEIIRFRCQPGFVMVGSHTVQCQTN 1595
Query: 514 KVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLI-- 571
W P C + P P + ++ G+ +
Sbjct: 1596 GRWGPKLPHCS------------------RVCQPPPEILHGEHTLSHQDNFSPGQEVFYS 1637
Query: 572 -----KTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIG 626
+AS T + P P ++ S + + ++G
Sbjct: 1638 CEPSYDLRGAASLHCTPQGDWSPEAPRCTVKSCDDFLGQLPHGRVLLPLN------LQLG 1691
Query: 627 ALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTLTSNAT 683
A V + C+ G++++G S C G W+ SVP C + C NP + NG T T
Sbjct: 1692 AKVSFVCDEGFRLKGRSASHCVLAGMKALWNSSVPVCEQIFCPNPPAILNGRHTGTPFGD 1751
Query: 684 Y-YGTAVLYECDEN------YRLEGHARRLCLE----NGTWSSGLPTCKGNEGHARRLCL 732
YG + Y CD + + L G + C NG WSS P C E C
Sbjct: 1752 IPYGKEISYACDTHPDRGMTFNLIGESSIRCTSDPQGNGVWSSPAPRC---ELSVPAACP 1808
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
+G G + + C PG Y G CT +G
Sbjct: 1809 HPPKIQNGHYIG-GHVSLYLPGMTISYICDPG---YLLVG----------KGFIFCTDQG 1854
Query: 793 TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMED 851
WS CK ++CS P ++ + + Y V C Y G +C D
Sbjct: 1855 IWSQLDHYCKEVNCSFPLFMNGISKELEMKKVYHYGDYVTLKCEDGYTLEGSPWSQCQAD 1914
Query: 852 GSWSGDEPRCEKR 864
W +C R
Sbjct: 1915 DRWDPPLAKCTSR 1927
Score = 217 bits (553), Expect = 2e-58
Identities = 123/636 (19%), Positives = 203/636 (31%), Gaps = 89/636 (13%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGT--VSTKLGSTISYACPEGN------MLVGSATRTC-- 321
CG P N F+ T + GS ++Y C G+ LVG + C
Sbjct: 1017 PPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTS 1076
Query: 322 ---KEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTV 378
+ G W+G AP C + ++E+G +
Sbjct: 1077 NDDQVGIWSGPAPQCI-----------------------------IPNKCTPPNVENGIL 1107
Query: 379 TLETTRT-THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGI 437
+ + V + C + + G R C KW P C P + G
Sbjct: 1108 VSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPEILHGEH 1167
Query: 438 VTTSGRRT--GSVATYSCEPGFILFGSNV-----------------NIDCGRLTAIPYGS 478
+ G YSCEPG+ L G+ C
Sbjct: 1168 TPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHG 1227
Query: 479 ISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCEGKATKDIKVCS 535
LG++V + C +RL G C+ +W+++ P CE +
Sbjct: 1228 RVLFPLNLQLGAKVSFVCDEGFRLKGSSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPAIL 1287
Query: 536 NVAVDRREIRCPEPTLPAHSILSVT---GNDRLYGRTLIKTADSASSVATYKIGALPTLP 592
N P +P +S T DR LI + + + G +
Sbjct: 1288 NGRH----TGTPSGDIPYGKEISYTCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPA 1343
Query: 593 AHSILSVTGNDRLY-GRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTG 651
LSV + + + + +G + Y C GY + + +C +
Sbjct: 1344 PRCELSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLNYECRPGYFGKMFSI-SCLENL 1402
Query: 652 SWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLE-- 709
WS C CG P NG + ++ T +G+ V Y C+E +RL G CL
Sbjct: 1403 VWSSVEDNCRRKSCGPPPEPFNGMVHINTD-TQFGSTVNYSCNEGFRLIGSPSTTCLVSG 1461
Query: 710 -NGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFY 768
N TW P C+ + NG + S + +T C G
Sbjct: 1462 NNVTWDKKAPICEIISCEPPP-TISNGDFYS---NNRTSFHNGTVVT---YQCHTG---P 1511
Query: 769 YHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYN 827
+F L + + T + G WS P C + + ++N + N++ +
Sbjct: 1512 DGEQLFELVGERSIYCTSKDDQVGVWSSPPPRCISTNKCTAPEVENAIRVPGNRSFFSLT 1571
Query: 828 SAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEK 863
+ + C P + +G + +C +G W P C +
Sbjct: 1572 EIIRFRCQPGFVMVGSHTVQCQTNGRWGPKLPHCSR 1607
Score = 216 bits (550), Expect = 6e-58
Identities = 118/659 (17%), Positives = 192/659 (29%), Gaps = 129/659 (19%)
Query: 279 NCGSPD--RHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTCQY 335
N +P + L + + C G ++ G C+ W P+C
Sbjct: 645 NKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCS- 703
Query: 336 FQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTL-ETTRTTHGAVAIYA 394
C + H T + + G Y+
Sbjct: 704 -----------------------------RVCQPPPDVLHAERTQRDKDNFSPGQEVFYS 734
Query: 395 CHENYTLIGETRRVCGDGGKWNGTEPQCLFDWC--AEPPQISGGIVTTSGRRTGSVATYS 452
C Y L G C G W+ P C C ++G ++ + G+ +
Sbjct: 735 CEPGYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVDFV 794
Query: 453 CEPGFILFGSNVN--------------------IDCGRLTAIPYGSISYLNETTY-LGSE 491
C+ GF L GS+ + I C IP G + + G
Sbjct: 795 CDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKA 854
Query: 492 VLYSCSRN------YRLVGHPRRSCLESK----VWSDTAPKCEGKATKDIKVCSNVAVDR 541
V Y+C + + L+G C VWS AP+C A +
Sbjct: 855 VNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFA--K 912
Query: 542 REIRCPEPTLPAHSILSVTGND--RLYGRTLIKTADSASSVATYKIGA----LPTLPAHS 595
+ + P + L ++ + S P P +
Sbjct: 913 LKTQTNASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNG 972
Query: 596 ILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS--- 652
++ V + ++G+ + Y C G+++ G + C +G+
Sbjct: 973 MVHVITD--------------------IQVGSRINYSCTTGHRLIGHSSAECILSGNTAH 1012
Query: 653 WSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDE------NYRLEGHARR 705
WS P C + CG P T+ NG F T+ + YG+ V Y C+ + L G
Sbjct: 1013 WSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSI 1072
Query: 706 LCLEN----GTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSC 761
C N G WS P C +ENG S + + + + C
Sbjct: 1073 YCTSNDDQVGIWSGPAPQCI-IPNKCTPPNVENGILVSD---NRSLFSLNEVVE---FRC 1125
Query: 762 LPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMN 821
PG + +G C W +P+C + P +
Sbjct: 1126 QPG---FVMKG----------PRRVKCQALNKWEPELPSCSRVCQPPPEILHGEHTPSHQ 1172
Query: 822 QTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIPGRSRRSPINS 880
+ V Y C P Y G C G WS + PRC + G+ +
Sbjct: 1173 DNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLF 1231
Score = 209 bits (533), Expect = 6e-56
Identities = 130/673 (19%), Positives = 204/673 (30%), Gaps = 140/673 (20%)
Query: 277 PANCGSPDRHVNTTFVG-TVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAP 331
+C + V V+ +LG+ + + C EG L GS+ C E W P
Sbjct: 314 VKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGFQLKGSSASYCVLAGMESLWNSSVP 373
Query: 332 TCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGAV 390
C+ + C I +G T + G
Sbjct: 374 VCE-----------------------------QIFCPSPPVIPNGRHTGKPLEVFPFGKA 404
Query: 391 AIYACH------ENYTLIGETRRVCGDG----GKWNGTEPQC--LFDWCAEPPQISGGIV 438
Y C ++ LIGE+ C G W+ P+C L A + +
Sbjct: 405 VNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLK 464
Query: 439 TTSGRRT---GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSI 479
T + G+ Y C P + ++ C G +
Sbjct: 465 TQTNASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMV 524
Query: 480 SYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCEGKATKDIKVCSN 536
+ + GS + YSC+ +RL+GH C+ S WS P C+
Sbjct: 525 HVITDIQV-GSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQ------------ 571
Query: 537 VAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSI 596
R PT+ +S + YG + + + L
Sbjct: 572 -----RIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPG-----SGGRKVFELVGEPS 621
Query: 597 LSVTGNDRLYGR-----------------TLIKTADSASSVATYKIGALVKYRCERGYKV 639
+ T ND G + + + + + + +V++RC+ G+ +
Sbjct: 622 IYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVM 681
Query: 640 EGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYR 698
+G C+ W +P C V C P V + T + G V Y C+ Y
Sbjct: 682 KGPRRVKCQALNKWEPELPSCSRV-CQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYD 740
Query: 699 LEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
L G A C G WS PTC+ L NG + G +
Sbjct: 741 LRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLG--------AKVD 792
Query: 759 LSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVI 818
C G + +G SY W+ +P C+ I C P I NGR
Sbjct: 793 FVCDEG---FQLKG-------SSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHT 842
Query: 819 IMNQTT-TYNSAVEYHCVPQ------YQRIGPYLRKCME----DGSWSGDEPRCEKRFNS 867
+ AV Y C P + IG +C +G WS PRC +
Sbjct: 843 GKPLEVFPFGKAVNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHC 902
Query: 868 GIPGRSRRSPINS 880
P + + +
Sbjct: 903 QAPDHFLFAKLKT 915
Score = 209 bits (532), Expect = 9e-56
Identities = 129/653 (19%), Positives = 199/653 (30%), Gaps = 138/653 (21%)
Query: 280 CGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE----GFWTGVAPTCQY 335
+ + + ++ +LG+ +S+ C EG L GS+ C W P C+
Sbjct: 1218 DDFLGQLPHGRVLFPLNLQLGAKVSFVCDEGFRLKGSSVSHCVLVGMRSLWNNSVPVCE- 1276
Query: 336 FQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGAVAIYA 394
++ C I +G T + +G Y
Sbjct: 1277 ----------------------------HIFCPNPPAILNGRHTGTPSGDIPYGKEISYT 1308
Query: 395 CHEN------YTLIGETRRVCGDGGKWNGT--------EPQCLFDWCAEPPQISGGIVTT 440
C + + LIGE+ C NG E C P Q T
Sbjct: 1309 CDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPFASPTI 1368
Query: 441 SGRRT----GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSIS 480
G+ Y C PG+ ++ CG G +
Sbjct: 1369 PINDFEFPVGTSLNYECRPGYFGKMFSISCLENLVWSSVEDNCRRKSCGPPPEPFNGMVH 1428
Query: 481 YLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEGKATKDIKVCSNV 537
+T + GS V YSC+ +RL+G P +CL S W AP CE + + SN
Sbjct: 1429 INTDTQF-GSTVNYSCNEGFRLIGSPSTTCLVSGNNVTWDKKAPICEIISCEPPPTISNG 1487
Query: 538 AV-----------DRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVAT---- 582
+C + G +Y + SS
Sbjct: 1488 DFYSNNRTSFHNGTVVTYQCHTGPDGEQL-FELVGERSIYCTSKDDQVGVWSSPPPRCIS 1546
Query: 583 YKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGE 642
P + + + + + ++++RC+ G+ + G
Sbjct: 1547 TNKCTAPEVENAIRVPGNRS-------------------FFSLTEIIRFRCQPGFVMVGS 1587
Query: 643 PLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEG 701
C+ G W +P C V PE + +G TL+ + G V Y C+ +Y L G
Sbjct: 1588 HTVQCQTNGRWGPKLPHCSRVCQPPPE-ILHGEHTLSHQDNFSPGQEVFYSCEPSYDLRG 1646
Query: 702 HARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSC 761
A C G WS P C L +G L G K C
Sbjct: 1647 AASLHCTPQGDWSPEAPRCTVKSCDDFLGQLPHGRVLLPLNLQLGAKVS--------FVC 1698
Query: 762 LPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMN 821
G + +G + S+ + W+ +P C+ I C +P +I NGR
Sbjct: 1699 DEG---FRLKG-------RSASHCVLAGMKALWNSSVPVCEQIFCPNPPAILNGRHTGTP 1748
Query: 822 QTT-TYNSAVEYHCVPQ------YQRIGPYLRKCMED----GSWSGDEPRCEK 863
Y + Y C + IG +C D G WS PRCE
Sbjct: 1749 FGDIPYGKEISYACDTHPDRGMTFNLIGESSIRCTSDPQGNGVWSSPAPRCEL 1801
Score = 208 bits (531), Expect = 1e-55
Identities = 119/655 (18%), Positives = 196/655 (29%), Gaps = 130/655 (19%)
Query: 276 NPANCGSPD-RHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTC 333
+ P+ H T + G + Y+C G L G+A+ C G W+ AP C
Sbjct: 1153 SRVCQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSPEAPRC 1212
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIY 393
C L GA +
Sbjct: 1213 AV-----------------------------KSCDDFLGQLPHGRVLFPLNLQLGAKVSF 1243
Query: 394 ACHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GS 447
C E + L G + C G WN + P C +C PP I G T + G
Sbjct: 1244 VCDEGFRLKGSSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGK 1303
Query: 448 VATYSCEP------GFILFGSNV-------------------------NIDCGRLTAIPY 476
+Y+C+P F L G + C P+
Sbjct: 1304 EISYTCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPF 1363
Query: 477 GSISY-LNETTY-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVC 534
S + +N+ + +G+ + Y C Y SCLE+ VWS C
Sbjct: 1364 ASPTIPINDFEFPVGTSLNYECRPGYFG-KMFSISCLENLVWSSVEDNCR---------- 1412
Query: 535 SNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD-----SASSVATYKIGALP 589
C P P + ++ + D +G T+ + + S T +
Sbjct: 1413 --------RKSCGPPPEPFNGMVHI-NTDTQFGSTVNYSCNEGFRLIGSPSTTCLVSGNN 1463
Query: 590 TLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG------YKVEGEP 643
T+ +++ ++ G +V Y+C G +++ GE
Sbjct: 1464 VTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNGTVVTYQCHTGPDGEQLFELVGER 1523
Query: 644 LSTC----EDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYR 698
C + G WS P CI + V N + + + + + C +
Sbjct: 1524 SIYCTSKDDQVGVWSSPPPRCISTNKCTAPEVENAIRVPGNRSFFSLTEIIRFRCQPGFV 1583
Query: 699 LEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
+ G C NG W LP C + +G + + + +P + +
Sbjct: 1584 MVGSHTVQCQTNGRWGPKLPHCSRVCQPP--PEILHGEHTL---SHQDNFSPGQEVF--- 1635
Query: 759 LSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVI 818
SC P Y RG + + CT +G WS P C C +
Sbjct: 1636 YSCEPS---YDLRG----------AASLHCTPQGDWSPEAPRCTVKSCDDFLGQLPHGRV 1682
Query: 819 IMNQTTTYNSAVEYHCVPQYQRIGPYLRKCM---EDGSWSGDEPRCEKRFNSGIP 870
++ + V + C ++ G C+ W+ P CE+ F P
Sbjct: 1683 LLPLNLQLGAKVSFVCDEGFRLKGRSASHCVLAGMKALWNSSVPVCEQIFCPNPP 1737
Score = 208 bits (530), Expect = 1e-55
Identities = 116/654 (17%), Positives = 181/654 (27%), Gaps = 134/654 (20%)
Query: 272 ICQHNPANCGSPD--RHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTG 328
Q N +P + L + + C G ++ G C+ W
Sbjct: 1088 APQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEP 1147
Query: 329 VAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHG 388
P+C V E + + G
Sbjct: 1148 ELPSCSR-----------------------------VCQPPPEILHGEHTPSHQDNFSPG 1178
Query: 389 AVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT--G 446
Y+C Y L G C G W+ P+C C + G
Sbjct: 1179 QEVFYSCEPGYDLRGAASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLG 1238
Query: 447 SVATYSCEPGFILFGSNVN--------------------IDCGRLTAIPYGSISYLNETT 486
+ ++ C+ GF L GS+V+ I C AI G +
Sbjct: 1239 AKVSFVCDEGFRLKGSSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPAILNGRHTGTPSGD 1298
Query: 487 YL-GSEVLYSC------SRNYRLVGHPRRSCLES----KVWSDTAPKCEGKATK-DIKVC 534
G E+ Y+C + L+G C VWS AP+CE K
Sbjct: 1299 IPYGKEISYTCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCKTP 1358
Query: 535 SNVAVDRREIRCPEPTLPAHSILSVTGND--RLYGRTLIKTADSASSVATYKIGAL---- 588
I + P + L+ ++ + S
Sbjct: 1359 EQFPFASPTIPINDFEFPVGTSLNYECRPGYFGKMFSISCLENLVWSSVEDNCRRKSCGP 1418
Query: 589 PTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCE 648
P P + ++ + + + G+ V Y C G+++ G P +TC
Sbjct: 1419 PPEPFNGMVHINTD--------------------TQFGSTVNYSCNEGFRLIGSPSTTCL 1458
Query: 649 DTGS---WSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDEN------YR 698
+G+ W P C + C P T+ NG F + ++ GT V Y+C +
Sbjct: 1459 VSGNNVTWDKKAPICEIISCEPPPTISNGDFYSNNRTSFHNGTVVTYQCHTGPDGEQLFE 1518
Query: 699 LEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
L G C + G WSS P C A
Sbjct: 1519 LVGERSIYCTSK--------------------DDQVGVWSSPPPRCISTNKCTAPEVENA 1558
Query: 759 LSCLPGKRFYYHRGI--------FRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPG 810
+ + F+ I F + + T C G W +P C + P
Sbjct: 1559 IRVPGNRSFFSLTEIIRFRCQPGFVMVGSH----TVQCQTNGRWGPKLPHCSRVCQPPPE 1614
Query: 811 SIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKR 864
+ + + V Y C P Y G C G WS + PRC +
Sbjct: 1615 ILHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCTPQGDWSPEAPRCTVK 1668
Score = 208 bits (529), Expect = 2e-55
Identities = 123/649 (18%), Positives = 200/649 (30%), Gaps = 129/649 (19%)
Query: 280 CGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQYFQLQ 339
T +G+++ Y C + W+ C+
Sbjct: 905 PDHFLFAKLKTQTNASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKDVCKR---- 960
Query: 340 PMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENY 399
C +G V + T G+ Y+C +
Sbjct: 961 -------------------------KSCKTPPDPVNGMVHVITD-IQVGSRINYSCTTGH 994
Query: 400 TLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSVATYSC 453
LIG + C G+ W+ P C C PP I+ G ++ R GSV TY C
Sbjct: 995 RLIGHSSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRC 1054
Query: 454 EPG------FILFGSN---------------------VNIDCGRLTAIPYGSISYLNETT 486
G F L G + + + G + N +
Sbjct: 1055 NLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSL 1114
Query: 487 Y-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIR 545
+ L V + C + + G R C W P C +
Sbjct: 1115 FSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCS------------------RVC 1156
Query: 546 CPEPTLPAHSILSVTGNDRLYGRTLIKT-------ADSASSVATYKIGALPTLPAHSILS 598
P P + ++ G+ + + +AS T + P P ++ S
Sbjct: 1157 QPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSPEAPRCAVKS 1216
Query: 599 VTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSG 655
+ + ++GA V + C+ G++++G +S C G W+
Sbjct: 1217 CDDFLGQLPHGRVLFPLN------LQLGAKVSFVCDEGFRLKGSSVSHCVLVGMRSLWNN 1270
Query: 656 SVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDEN------YRLEGHARRLCL 708
SVP C ++ C NP + NG T T + YG + Y CD + + L G + C
Sbjct: 1271 SVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEISYTCDPHPDRGMTFNLIGESTIRCT 1330
Query: 709 ENG----TWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPG 764
+ WSS P C+ + E ++S + P + C PG
Sbjct: 1331 SDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLN--YECRPG 1388
Query: 765 KRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT 824
Y+ + ++ +C + WS C+ C P NG V I N T
Sbjct: 1389 ---YFGKM-----------FSISCLENLVWSSVEDNCRRKSCGPPPEPFNGMVHI-NTDT 1433
Query: 825 TYNSAVEYHCVPQYQRIGPYLRKCMEDGS---WSGDEPRCEKRFNSGIP 870
+ S V Y C ++ IG C+ G+ W P CE P
Sbjct: 1434 QFGSTVNYSCNEGFRLIGSPSTTCLVSGNNVTWDKKAPICEIISCEPPP 1482
Score = 208 bits (529), Expect = 2e-55
Identities = 130/669 (19%), Positives = 206/669 (30%), Gaps = 139/669 (20%)
Query: 280 CGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAPTCQY 335
+ +N + V+ +LG+ + + C EG L GS+ C E W P C+
Sbjct: 768 DDFMGQLLNGRVLFPVNLQLGAKVDFVCDEGFQLKGSSASYCVLAGMESLWNSSVPVCE- 826
Query: 336 FQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGAVAIYA 394
+ C I +G T + G Y
Sbjct: 827 ----------------------------QIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYT 858
Query: 395 CH------ENYTLIGETRRVC----GDGGKWNGTEPQC--LFDWCAEPPQISGGIVTTSG 442
C ++ LIGE+ C G W+ P+C L A + + T +
Sbjct: 859 CDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTN 918
Query: 443 RRT---GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSISYLN 483
G+ Y C P + ++ C G + +
Sbjct: 919 ASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVIT 978
Query: 484 ETTYLGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEGKATKDIKVCSNVAVD 540
+ GS + YSC+ +RL+GH C+ S WS P C+
Sbjct: 979 DIQV-GSRINYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQ---------------- 1021
Query: 541 RREIRCPEPTLPAH-SILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSV 599
I C P A+ +S + YG + + + + L +
Sbjct: 1022 --RIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLG-----SRGRKVFELVGEPSIYC 1074
Query: 600 TGNDRLYGR-----------------TLIKTADSASSVATYKIGALVKYRCERGYKVEGE 642
T ND G + + + + + + +V++RC+ G+ ++G
Sbjct: 1075 TSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGP 1134
Query: 643 PLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGH 702
C+ W +P C V PE + + G V Y C+ Y L G
Sbjct: 1135 RRVKCQALNKWEPELPSCSRVCQPPPEILHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGA 1194
Query: 703 ARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCL 762
A C G WS P C L +G L G + + C
Sbjct: 1195 ASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLG--------AKVSFVCD 1246
Query: 763 PGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQ 822
G + +G VS+ R W+ +P C+ I C +P +I NGR
Sbjct: 1247 EG---FRLKG-------SSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPAILNGRHTGTPS 1296
Query: 823 TT-TYNSAVEYHCVPQ------YQRIGPYLRKCMEDGS----WSGDEPRCEKRFNSGIPG 871
Y + Y C P + IG +C D WS PRCE +G
Sbjct: 1297 GDIPYGKEISYTCDPHPDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCK 1356
Query: 872 RSRRSPINS 880
+ P S
Sbjct: 1357 TPEQFPFAS 1365
Score = 206 bits (525), Expect = 6e-55
Identities = 118/644 (18%), Positives = 185/644 (28%), Gaps = 129/644 (20%)
Query: 277 PANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTC 333
N +P N V + L + + C G ++ G C+ W P+C
Sbjct: 193 IPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSC 252
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLET-TRTTHGAVAI 392
C + H T + G
Sbjct: 253 S------------------------------RVCQPPPDVLHAERTQRDKDNFSPGQEVF 282
Query: 393 YACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT--GSVAT 450
Y+C Y L G C G W+ P C C + G+
Sbjct: 283 YSCEPGYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPVNLQLGAKVD 342
Query: 451 YSCEPGFILFGSN--------------------VNIDCGRLTAIPYGSISYLNETTY-LG 489
+ C+ GF L GS+ I C IP G + + G
Sbjct: 343 FVCDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFG 402
Query: 490 SEVLYSCSRN------YRLVGHPRRSCLESK----VWSDTAPKCEGKATKDIKVCSNVAV 539
V Y+C + + L+G C VWS AP+C + +
Sbjct: 403 KAVNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCG--ILGHCQAPDHFLF 460
Query: 540 DRREIRCPEPTLPAHSILSVTGND--RLYGRTLIKTADSASSVATYKIGA----LPTLPA 593
+ + + P + L ++ + S P P
Sbjct: 461 AKLKTQTNASDFPIGTSLKYECRPEYYGRPFSITCLDNLVWSSPKDVCKRKSCKTPPDPV 520
Query: 594 HSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS- 652
+ ++ V + ++G+ + Y C G+++ G + C +G+
Sbjct: 521 NGMVHVITD--------------------IQVGSRINYSCTTGHRLIGHSSAECILSGNA 560
Query: 653 --WSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDE------NYRLEGHA 703
WS P C + CG P T+ NG F T+ + YG+ V Y C+ + L G
Sbjct: 561 AHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEP 620
Query: 704 RRLCLEN----GTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPAL 759
C N G WS P C +ENG S + + + +
Sbjct: 621 SIYCTSNDDQVGIWSGPAPQCIIPN-KCTPPNVENGILVSD---NRSLFSLNEVVE---F 673
Query: 760 SCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVII 819
C PG + +G C W +P+C + P + R
Sbjct: 674 RCQPG---FVMKG----------PRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQR 720
Query: 820 MNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEK 863
+ V Y C P Y G +C G WS P CE
Sbjct: 721 DKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCEV 764
Score = 206 bits (524), Expect = 8e-55
Identities = 120/648 (18%), Positives = 195/648 (30%), Gaps = 136/648 (20%)
Query: 278 ANCGSPDRHVNTTFVGTV--STKLGSTISYACPEGNMLVGSATRTC-KEGFWTGVAPTCQ 334
C P ++ + G + Y+C G L G+A+ C +G W+ APTC+
Sbjct: 254 RVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCE 313
Query: 335 YFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYA 394
C L GA +
Sbjct: 314 V-----------------------------KSCDDFMGQLLNGRVLFPVNLQLGAKVDFV 344
Query: 395 CHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSV 448
C E + L G + C G WN + P C +C PP I G T G
Sbjct: 345 CDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKA 404
Query: 449 ATYSCEP------GFILFGSN-----------------------VNIDCGRLTAIPYGSI 479
Y+C+P F L G + + +
Sbjct: 405 VNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLK 464
Query: 480 SYLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538
+ N + + +G+ + Y C Y +CL++ VWS C+
Sbjct: 465 TQTNASDFPIGTSLKYECRPEYYGRP-FSITCLDNLVWSSPKDVCK-------------- 509
Query: 539 VDRREIRCPEPTLPAHSILSVTGNDRLYGRTL---------IKTADSASSVATYKIGALP 589
C P P + ++ V + + G + + SA + +
Sbjct: 510 ----RKSCKTPPDPVNGMVHVITDIQ-VGSRINYSCTTGHRLIGHSSAECILSGNAAHWS 564
Query: 590 TLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG------YKVEGEP 643
T P G +++ + G++V YRC G +++ GEP
Sbjct: 565 TKPPICQRIPCGLPPTIANGDF----ISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEP 620
Query: 644 LSTCED----TGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYR 698
C G WSG P+CI + P V NG + + + V + C +
Sbjct: 621 SIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFV 680
Query: 699 LEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
++G R C W LP+C + + + K
Sbjct: 681 MKGPRRVKCQALNKWEPELPSCSRVCQPP--PDVLHAERTQ------RDKDNFSPGQEVF 732
Query: 759 LSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVI 818
SC PG Y RG + + CT +G WS PTC+ C +
Sbjct: 733 YSCEPG---YDLRG----------AASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRV 779
Query: 819 IMNQTTTYNSAVEYHCVPQYQRIGPYLRKCM---EDGSWSGDEPRCEK 863
+ + V++ C +Q G C+ + W+ P CE+
Sbjct: 780 LFPVNLQLGAKVDFVCDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQ 827
Score = 205 bits (523), Expect = 1e-54
Identities = 124/643 (19%), Positives = 189/643 (29%), Gaps = 126/643 (19%)
Query: 278 ANCGSPDR--HVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTCQ 334
C P H T + G + Y+C G L G+A+ C G W+ APTC+
Sbjct: 704 RVCQPPPDVLHAERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCE 763
Query: 335 YFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYA 394
C L GA +
Sbjct: 764 V-----------------------------KSCDDFMGQLLNGRVLFPVNLQLGAKVDFV 794
Query: 395 CHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSV 448
C E + L G + C G WN + P C +C PP I G T G
Sbjct: 795 CDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKA 854
Query: 449 ATYSCEP------GFILFGSN-----------------------VNIDCGRLTAIPYGSI 479
Y+C+P F L G + + +
Sbjct: 855 VNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLK 914
Query: 480 SYLNETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVA 538
+ N + + G+ + Y C Y +CL++ VWS C+ K+ K N
Sbjct: 915 TQTNASDFPIGTSLKYECRPEYYGRP-FSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGM 973
Query: 539 VDRR---------EIRCPE-PTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGAL 588
V C L HS + + G
Sbjct: 974 VHVITDIQVGSRINYSCTTGHRLIGHSSAECILSGNTAHWS-----TKPPICQRIPCGLP 1028
Query: 589 PTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTC- 647
PT+ +S + YG SV TY+ + R + +++ GEP C
Sbjct: 1029 PTIANGDFISTNRENFHYG-----------SVVTYRC--NLGSRGRKVFELVGEPSIYCT 1075
Query: 648 ---EDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHA 703
+ G WSG P+CI + P V NG + + + V + C + ++G
Sbjct: 1076 SNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPR 1135
Query: 704 RRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLP 763
R C W LP+C + +G + + SC P
Sbjct: 1136 RVKCQALNKWEPELPSCSRVCQPPPE--ILHGEHTP------SHQDNFSPGQEVFYSCEP 1187
Query: 764 GKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQT 823
G Y RG + + CT +G WS P C C ++
Sbjct: 1188 G---YDLRG----------AASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLN 1234
Query: 824 TTYNSAVEYHCVPQYQRIGPYLRKCMEDGS---WSGDEPRCEK 863
+ V + C ++ G + C+ G W+ P CE
Sbjct: 1235 LQLGAKVSFVCDEGFRLKGSSVSHCVLVGMRSLWNNSVPVCEH 1277
Score = 203 bits (517), Expect = 6e-54
Identities = 128/686 (18%), Positives = 196/686 (28%), Gaps = 148/686 (21%)
Query: 248 CVVLDGGRGWLWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYAC 307
C G G + H + + + F +G+++ Y C
Sbjct: 429 CTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTNASDF------PIGTSLKYEC 482
Query: 308 PEGNMLVGSATRTCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDC 367
+ W+ C+ C
Sbjct: 483 RPEYYGRPFSITCLDNLVWSSPKDVCK-----------------------------RKSC 513
Query: 368 GKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQCLF 424
+G V + T G+ Y+C + LIG + C G+ W+ P C
Sbjct: 514 KTPPDPVNGMVHV-ITDIQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWSTKPPICQR 572
Query: 425 DWCAEPPQISGGIVTTSGRRT---GSVATYSCEPG------FILFGSN------------ 463
C PP I+ G ++ R GSV TY C PG F L G
Sbjct: 573 IPCGLPPTIANGDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVG 632
Query: 464 ---------VNIDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLES 513
+ + + G + N + + L V + C + + G R C
Sbjct: 633 IWSGPAPQCIIPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQAL 692
Query: 514 KVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKT 573
W P C +VC P P + ++ G
Sbjct: 693 NKWEPELPSCS-------RVC-----------QPPPDVLHAERTQRDKDNFSPG------ 728
Query: 574 ADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSV------------A 621
Y L + + T S
Sbjct: 729 -----QEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCEVKSCDDFMGQLLNGRVLFPV 783
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTL 678
++GA V + C+ G++++G S C G W+ SVP C + C +P +PNG T
Sbjct: 784 NLQLGAKVDFVCDEGFQLKGSSASYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTG 843
Query: 679 TSNATY-YGTAVLYECD------ENYRLEGHARRLCLE----NGTWSSGLPTCKGNEGHA 727
+ +G AV Y CD ++ L G + C NG WSS P C
Sbjct: 844 KPLEVFPFGKAVNYTCDPHPDRGTSFDLIGESTIRCTSDPQGNGVWSSPAPRCG-----I 898
Query: 728 RRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRT 787
C + + + T C P YY R + T
Sbjct: 899 LGHCQAPDHFLFAKLKTQTNASDFPIGTSLKYECRPE---YYGRPF-----------SIT 944
Query: 788 CTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRK 847
C WS CK C P NG V ++ S + Y C ++ IG +
Sbjct: 945 CLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVIT-DIQVGSRINYSCTTGHRLIGHSSAE 1003
Query: 848 CMEDGS---WSGDEPRCEKRFNSGIP 870
C+ G+ WS P C++ P
Sbjct: 1004 CILSGNTAHWSTKPPICQRIPCGLPP 1029
Score = 201 bits (513), Expect = 2e-53
Identities = 134/659 (20%), Positives = 205/659 (31%), Gaps = 149/659 (22%)
Query: 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAPT 332
+C +P VN + GS I Y+C +G L+GS++ TC W P
Sbjct: 60 RKSCRNPPDPVNGMVHVIKGIQFGSQIKYSCTKGYRLIGSSSATCIISGDTVIWDNETPI 119
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVT-LETTRTTHGAVA 391
C + CG I +G +G+V
Sbjct: 120 CD-----------------------------RIPCGLPPTITNGDFISTNRENFHYGSVV 150
Query: 392 IYACHEN------YTLIGETRRVC----GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTS 441
Y C+ + L+GE C G W+G PQC+ PP + GI+ +
Sbjct: 151 TYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENGILVSD 210
Query: 442 GRRT---GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSISYL 482
R V + C+PGF++ G + C + + +
Sbjct: 211 NRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHAERTQR 270
Query: 483 NETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDR 541
++ + G EV YSC Y L G C WS AP CE
Sbjct: 271 DKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCE----------------- 313
Query: 542 REIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTG 601
C + + + + G + D G + S + G
Sbjct: 314 -VKSCDDFMGQLLNGRVLFPVNLQLGAKVDFVCDE---------GFQLKGSSASYCVLAG 363
Query: 602 NDRLYGRTLIKTAD--------------SASSVATYKIGALVKYRCER------GYKVEG 641
+ L+ ++ + + + G V Y C+ + + G
Sbjct: 364 MESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIG 423
Query: 642 EPLSTC----EDTGSWSGSVPECIYVDCGN-PETVPNGGFTLTSNATYY--GTAVLYECD 694
E C + G WS P C + P+ +NA+ + GT++ YEC
Sbjct: 424 ESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTNASDFPIGTSLKYECR 483
Query: 695 ENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSL 754
Y + CL+N WSS CK R+ C +G+ +
Sbjct: 484 PEYYGRPFSIT-CLDNLVWSSPKDVCK------RKSCKTPPDPVNGMVHVITDIQVGSRI 536
Query: 755 TRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDN 814
SC G RL + WS P C+ I C P +I N
Sbjct: 537 N---YSCTTG---------HRLIGHSSAECILSGN-AAHWSTKPPICQRIPCGLPPTIAN 583
Query: 815 GRVIIMNQTT-TYNSAVEYHCVP------QYQRIGPYLRKCMED----GSWSGDEPRCE 862
G I N+ Y S V Y C P ++ +G C + G WSG P+C
Sbjct: 584 GDFISTNRENFHYGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI 642
Score = 189 bits (481), Expect = 2e-49
Identities = 133/659 (20%), Positives = 205/659 (31%), Gaps = 134/659 (20%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE----GFWT 327
+C +P VN ++GS I+Y+C G+ L+G ++ C W+
Sbjct: 955 KDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECILSGNTAHWS 1014
Query: 328 GVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTL-ETTRTT 386
P CQ + CG I +G
Sbjct: 1015 TKPPICQ-----------------------------RIPCGLPPTIANGDFISTNRENFH 1045
Query: 387 HGAVAIYACHE------NYTLIGETRRVC----GDGGKWNGTEPQCLFDWCAEPPQISGG 436
+G+V Y C+ + L+GE C G W+G PQC+ PP + G
Sbjct: 1046 YGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENG 1105
Query: 437 IVTTSGRRT---GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYG 477
I+ + R V + C+PGF++ G + C I +G
Sbjct: 1106 ILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPEILHG 1165
Query: 478 SISYLNETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSN 536
+ ++ + G EV YSC Y L G C WS AP+C
Sbjct: 1166 EHTPSHQDNFSPGQEVFYSCEPGYDLRGAASLHCTPQGDWSPEAPRCA------------ 1213
Query: 537 VAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD-----SASSVATYKIGALPTL 591
C + + + G + D SSV+ + + +L
Sbjct: 1214 ------VKSCDDFLGQLPHGRVLFPLNLQLGAKVSFVCDEGFRLKGSSVSHCVLVGMRSL 1267
Query: 592 PAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRC------ERGYKVEGEPLS 645
+S+ ++ + + G + Y C + + GE
Sbjct: 1268 WNNSVPVCEHIFCPNPPAILNGRHTGTPSGDIPYGKEISYTCDPHPDRGMTFNLIGESTI 1327
Query: 646 TCEDTGS----WSGSVPEC----IYVDCGNPETVPNGGFTLTSNATYY--GTAVLYECDE 695
C WS P C C PE P T+ N + GT++ YEC
Sbjct: 1328 RCTSDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPFASPTIPINDFEFPVGTSLNYECRP 1387
Query: 696 NYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLT 755
Y + + CLEN WSS C+ R+ C +G+ ++
Sbjct: 1388 GYFGKMFSIS-CLENLVWSSVEDNCR------RKSCGPPPEPFNGMVHINTDTQFGSTVN 1440
Query: 756 RPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNG 815
SC G FRL + + TW P C+ I C P +I NG
Sbjct: 1441 ---YSCNEG---------FRLIGSPSTTCL-VSGNNVTWDKKAPICEIISCEPPPTISNG 1487
Query: 816 RVIIMNQTT-TYNSAVEYHCVPQYQRIGPY----------LRKCMEDGSWSGDEPRCEK 863
N+T+ + V Y C + K + G WS PRC
Sbjct: 1488 DFYSNNRTSFHNGTVVTYQCHTGPDGEQLFELVGERSIYCTSKDDQVGVWSSPPPRCIS 1546
Score = 188 bits (478), Expect = 5e-49
Identities = 133/674 (19%), Positives = 207/674 (30%), Gaps = 153/674 (22%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWT 327
+C +P VN ++GS I+Y+C G+ L+G ++ C W+
Sbjct: 505 KDVCKRKSCKTPPDPVNGMVHVITDIQVGSRINYSCTTGHRLIGHSSAECILSGNAAHWS 564
Query: 328 GVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-T 386
P CQ + CG I +G
Sbjct: 565 TKPPICQ-----------------------------RIPCGLPPTIANGDFISTNRENFH 595
Query: 387 HGAVAIYACHE------NYTLIGETRRVC----GDGGKWNGTEPQCLFDWCAEPPQISGG 436
+G+V Y C+ + L+GE C G W+G PQC+ PP + G
Sbjct: 596 YGSVVTYRCNPGSGGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCIIPNKCTPPNVENG 655
Query: 437 IVTTSGRRT---GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYG 477
I+ + R V + C+PGF++ G + C + +
Sbjct: 656 ILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSCSRVCQPPPDVLHA 715
Query: 478 SISYLNETTYL-GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSN 536
+ ++ + G EV YSC Y L G C WS AP CE
Sbjct: 716 ERTQRDKDNFSPGQEVFYSCEPGYDLRGAASMRCTPQGDWSPAAPTCE------------ 763
Query: 537 VAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK--IGALPTLPAH 594
C + + + + G + + G +
Sbjct: 764 ------VKSCDDFMGQLLNGRVLFPVNLQLG-----------AKVDFVCDEGFQLKGSSA 806
Query: 595 SILSVTGNDRLYGRTL-------------IKTAD-SASSVATYKIGALVKYRCER----- 635
S + G + L+ ++ I + + + G V Y C+
Sbjct: 807 SYCVLAGMESLWNSSVPVCEQIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRG 866
Query: 636 -GYKVEGEPLSTC----EDTGSWSGSVPECIYVDCGN-PETVPNGGFTLTSNATYY--GT 687
+ + GE C + G WS P C + P+ +NA+ + GT
Sbjct: 867 TSFDLIGESTIRCTSDPQGNGVWSSPAPRCGILGHCQAPDHFLFAKLKTQTNASDFPIGT 926
Query: 688 AVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGC 747
++ YEC Y CL+N WSS CK R+ C +G+
Sbjct: 927 SLKYECRPEYYGRP-FSITCLDNLVWSSPKDVCK------RKSCKTPPDPVNGMVHVITD 979
Query: 748 KTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCS 807
+ SC G RL + WS P C+ I C
Sbjct: 980 IQVGSRIN---YSCTTG---------HRLIGHSSAECILSGN-TAHWSTKPPICQRIPCG 1026
Query: 808 HPGSIDNGRVIIMNQ-TTTYNSAVEYHCVP------QYQRIGPYLRKCMED----GSWSG 856
P +I NG I N+ Y S V Y C ++ +G C + G WSG
Sbjct: 1027 LPPTIANGDFISTNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSG 1086
Query: 857 DEPRCEKRFNSGIP 870
P+C P
Sbjct: 1087 PAPQCIIPNKCTPP 1100
Score = 183 bits (466), Expect = 1e-47
Identities = 111/588 (18%), Positives = 172/588 (29%), Gaps = 121/588 (20%)
Query: 273 CQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTG 328
+CG P N T+ GST++Y+C EG L+GS + TC W
Sbjct: 1409 DNCRRKSCGPPPEPFNGMVHINTDTQFGSTVNYSCNEGFRLIGSPSTTCLVSGNNVTWDK 1468
Query: 329 VAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVT-LETTRTTH 387
AP C+ + C I +G T +
Sbjct: 1469 KAPICE-----------------------------IISCEPPPTISNGDFYSNNRTSFHN 1499
Query: 388 GAVAIYACHEN------YTLIGETRRVC----GDGGKWNGTEPQCLFDWCAEPPQISGGI 437
G V Y CH + L+GE C G W+ P+C+ P++ I
Sbjct: 1500 GTVVTYQCHTGPDGEQLFELVGERSIYCTSKDDQVGVWSSPPPRCISTNKCTAPEVENAI 1559
Query: 438 VTTSGRRT---GSVATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGS 478
R + + C+PGF++ GS+ + C I +G
Sbjct: 1560 RVPGNRSFFSLTEIIRFRCQPGFVMVGSHTVQCQTNGRWGPKLPHCSRVCQPPPEILHGE 1619
Query: 479 ISYLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNV 537
+ ++ + G EV YSC +Y L G C WS AP+C
Sbjct: 1620 HTLSHQDNFSPGQEVFYSCEPSYDLRGAASLHCTPQGDWSPEAPRCT------------- 1666
Query: 538 AVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD-----SASSVATYKIGALPTLP 592
C + + + G + D S + + + L
Sbjct: 1667 -----VKSCDDFLGQLPHGRVLLPLNLQLGAKVSFVCDEGFRLKGRSASHCVLAGMKALW 1721
Query: 593 AHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCER------GYKVEGEPLST 646
S+ ++ + + G + Y C+ + + GE
Sbjct: 1722 NSSVPVCEQIFCPNPPAILNGRHTGTPFGDIPYGKEISYACDTHPDRGMTFNLIGESSIR 1781
Query: 647 C----EDTGSWSGSVPECI---YVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYR 698
C + G WS P C C +P + NG + + Y G + Y CD Y
Sbjct: 1782 CTSDPQGNGVWSSPAPRCELSVPAACPHPPKIQNGHYIGGHVSLYLPGMTISYICDPGYL 1841
Query: 699 LEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
L G C + G WS CK + + +G+ K
Sbjct: 1842 LVGKGFIFCTDQGIWSQLDHYCK-------EVNCSFPLFMNGISKELEMKKVYHYGDYVT 1894
Query: 759 LSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDC 806
L C G Y G S C W + C +
Sbjct: 1895 LKCEDG---YTLEG----------SPWSQCQADDRWDPPLAKCTSRAH 1929
Score = 180 bits (457), Expect = 2e-46
Identities = 126/652 (19%), Positives = 188/652 (28%), Gaps = 128/652 (19%)
Query: 277 PANCGSPDRHVNTTFVGTVST--KLGSTISYAC------PEGNMLVGSATRTCKE----- 323
C SP N G G ++Y C L+G +T C
Sbjct: 827 QIFCPSPPVIPNGRHTGKPLEVFPFGKAVNYTCDPHPDRGTSFDLIGESTIRCTSDPQGN 886
Query: 324 GFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETT 383
G W+ AP C + C +H + +T
Sbjct: 887 GVWSSPAPRCG----------------------------ILGHCQAPDHFLFAKLKTQTN 918
Query: 384 RT--THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTS 441
+ G Y C Y + C D W+ + C C PP G+V
Sbjct: 919 ASDFPIGTSLKYECRPEYYGRPFS-ITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVI 977
Query: 442 GR-RTGSVATYSCEPGFILFGSNVN--------------------IDCGRLTAIPYGSIS 480
+ GS YSC G L G + I CG I G
Sbjct: 978 TDIQVGSRINYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFI 1037
Query: 481 YLNETTYL-GSEVLYSC------SRNYRLVGHPRRSCLESK----VWSDTAPKCEGKATK 529
N + GS V Y C + + LVG P C + +WS AP+C
Sbjct: 1038 STNRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQC-----I 1092
Query: 530 DIKVCSNVAVDRREIRCPE-PTLPAHSILSVTGND--RLYGRTLIK-TADSASSVA---- 581
C+ V+ + + ++ + G +K A +
Sbjct: 1093 IPNKCTPPNVENGILVSDNRSLFSLNEVVEFRCQPGFVMKGPRRVKCQALNKWEPELPSC 1152
Query: 582 TYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEG 641
+ P + + + G V Y CE GY + G
Sbjct: 1153 SRVCQPPPEILHGEHTPSHQD-------------------NFSPGQEVFYSCEPGYDLRG 1193
Query: 642 EPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEG 701
C G WS P C C + G L G V + CDE +RL+G
Sbjct: 1194 AASLHCTPQGDWSPEAPRCAVKSCDDFLGQLPHGRVLFPLNLQLGAKVSFVCDEGFRLKG 1253
Query: 702 HARRLCLENGT---WSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
+ C+ G W++ +P C+ + NG + T G K ++
Sbjct: 1254 SSVSHCVLVGMRSLWNNSVPVCEHIFCPNPPA-ILNGRHTG---TPSGDIPYGKEIS--- 1306
Query: 759 LSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAI----DCSHPGSIDN 814
+C P F L + T G WS P C+ C P
Sbjct: 1307 YTCDPH---PDRGMTFNLIGESTIRCTSDPHGNGVWSSPAPRCELSVRAGHCKTPEQFPF 1363
Query: 815 GRVIIMNQTTTY--NSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKR 864
I + +++ Y C P Y + C+E+ WS E C ++
Sbjct: 1364 ASPTIPINDFEFPVGTSLNYECRPGY-FGKMFSISCLENLVWSSVEDNCRRK 1414
>2c8i_E CD55, complement decay-accelerating factor; picornavirus, DAF,
virus-receptor complex, antigen, blood group antigen,
complement pathway, GPI-anchor; 14.00A {Homo sapiens}
SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
Length = 316
Score = 187 bits (476), Expect = 3e-53
Identities = 78/393 (19%), Positives = 119/393 (30%), Gaps = 114/393 (29%)
Query: 366 DCGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIG--ETRRVCGDGGKWNGTEPQC 422
DCG + + LE + V Y C E++ I + +C G +W+ E C
Sbjct: 2 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 61
Query: 423 -LFDWCAEPPQISGGIVTTSGRRT---GSVATYSCEPGFILFGSNVN------------- 465
C PP + GR + +V TY CE F+ +
Sbjct: 62 NRSQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDI 121
Query: 466 -----IDCGRLTAIPYGSISY---LNETTYLGSEVLYSCSRNYRLVGH--PRRSCLESKV 515
C T + S+ +G+ V Y C YR P+ +CL++
Sbjct: 122 EEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLK 181
Query: 516 WSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD 575
WS C ++ CP P
Sbjct: 182 WSTAVEFC------------------KKKSCPNPGE------------------------ 199
Query: 576 SASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCER 635
+ + V G GA + + C
Sbjct: 200 ----------------IRNGQIDVPGG--------------------ILFGATISFSCNT 223
Query: 636 GYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYE 692
GYK+ G S C +GS WS +PEC + C P + NG + Y +V Y
Sbjct: 224 GYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYA 283
Query: 693 CDENYRLEGHARRLCL---ENGTWSSGLPTCKG 722
C++ + + G C + G WS P C+G
Sbjct: 284 CNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 316
Score = 157 bits (399), Expect = 7e-43
Identities = 52/257 (20%), Positives = 87/257 (33%), Gaps = 27/257 (10%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLS--TCEDTGSWSGSVPECIYV-DCGNPETVP 672
+ ++ ++ Y+CE + C WS C DCG P VP
Sbjct: 15 ALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNRSQDCGLPPDVP 74
Query: 673 NGGFTLTSNATY-YGTAVLYECDENYRLEGH--ARRLCLENGTWSSGLPTCKGNEGHARR 729
N L ++ T + Y+C+E++ +CL+ WS C +
Sbjct: 75 NAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNRSCEVP-- 132
Query: 730 LCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCT 789
L + + + + C PG Y +S TC
Sbjct: 133 TRLNSASLKQP-YITQNYFPVGTVVE---YECRPG---YRREP--------SLSPKLTCL 177
Query: 790 KRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCM 849
+ WS + CK C +PG I NG++ + + + + + C Y+ G C+
Sbjct: 178 QNLKWSTAVEFCKKKSCPNPGEIRNGQIDV-PGGILFGATISFSCNTGYKLFGSTSSFCL 236
Query: 850 EDGS---WSGDEPRCEK 863
GS WS P C +
Sbjct: 237 ISGSSVQWSDPLPECRE 253
Score = 145 bits (366), Expect = 2e-38
Identities = 61/265 (23%), Positives = 91/265 (34%), Gaps = 46/265 (17%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLS--TCEDTGSWSGSVPECIYVDCGNPETVPN 673
+ ++ ++ Y+CE + C WS E C P + +
Sbjct: 79 ALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDI-EEFCNRSCEVPTRLNS 137
Query: 674 GGFT---LTSNATYYGTAVLYECDENYRLEGHA--RRLCLENGTWSSGLPTCKGNEGHAR 728
+T N GT V YEC YR E + CL+N WS+ + CK +
Sbjct: 138 ASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCK------K 191
Query: 729 RLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVS 783
+ C + NG + SC G ++L S
Sbjct: 192 KSCPNPGEIRNGQID--------VPGGILFGATISFSCNTG---------YKLFG----S 230
Query: 784 YTRTCTKRGT---WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQR 840
+ C G+ WS +P C+ I C P IDNG + Y +V Y C +
Sbjct: 231 TSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTM 290
Query: 841 IGPYLRKCM---EDGSWSGDEPRCE 862
IG + C ++G WSG P C
Sbjct: 291 IGEHSIYCTVNNDEGEWSGPPPECR 315
Score = 144 bits (364), Expect = 3e-38
Identities = 80/416 (19%), Positives = 123/416 (29%), Gaps = 141/416 (33%)
Query: 427 CAEPPQISGGIVTTSGRRT---GSVATYSCEPGFILFGS--------------------N 463
C PP + GR + +V TY CE F+ N
Sbjct: 3 CGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCN 62
Query: 464 VNIDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRS--CLESKVWSDTA 520
+ DCG +P + T++ + + Y C ++ + + S CL+ WSD
Sbjct: 63 RSQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIE 122
Query: 521 PKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSV 580
C C PT + L
Sbjct: 123 EFC-------------------NRSCEVPTRLNSASLKQP-------------------- 143
Query: 581 ATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVE 640
+T N G +V Y+ C GY+ E
Sbjct: 144 -----------------YITQNYFPVG-----------TVVEYE--------CRPGYRRE 167
Query: 641 G--EPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYR 698
P TC WS +V C C NP + NG + +G + + C+ Y+
Sbjct: 168 PSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGG-ILFGATISFSCNTGYK 226
Query: 699 LEGHARRLCLENGT---WSSGLPTCKGNEGHARRLC-----LENGTWSSGLPTCKGCKTP 750
L G CL +G+ WS LP C+ C ++NG +
Sbjct: 227 LFGSTSSFCLISGSSVQWSDPLPECR------EIYCPAPPQIDNGIIQG----ERDHYGY 276
Query: 751 KKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCT---KRGTWSGHIPTCKA 803
++S+T +C G + G ++ CT G WSG P C+
Sbjct: 277 RQSVT---YACNKG---FTMIG----------EHSIYCTVNNDEGEWSGPPPECRG 316
Score = 138 bits (348), Expect = 5e-36
Identities = 63/324 (19%), Positives = 98/324 (30%), Gaps = 83/324 (25%)
Query: 279 NCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGS--ATRTC-KEGFWTGVAPTC 333
+CG P N T + I+Y C E + + + C K W+ + C
Sbjct: 2 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 61
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT-THGAVAI 392
+ DCG + + LE + V
Sbjct: 62 NR----------------------------SQDCGLPPDVPNAQPALEGRTSFPEDTVIT 93
Query: 393 YACHENYTLIG--ETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIV-----TTSGRRT 445
Y C E++ I + +C G +W+ E C C P +++ + T +
Sbjct: 94 YKCEESFVKIPGEKDSVICLKGSQWSDIEEFCNRS-CEVPTRLNSASLKQPYITQNYFPV 152
Query: 446 GSVATYSCEPGFILFGSNVN-------------------IDCGRLTAIPYGSISYLNETT 486
G+V Y C PG+ S C I G I
Sbjct: 153 GTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGIL 212
Query: 487 YLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCEGKATKDIKVCSNVAVDRRE 543
+ G+ + +SC+ Y+L G CL S WSD P+C E
Sbjct: 213 F-GATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR------------------E 253
Query: 544 IRCPEPTLPAHSILSVTGNDRLYG 567
I CP P + I+ + Y
Sbjct: 254 IYCPAPPQIDNGIIQGERDHYGYR 277
Score = 135 bits (340), Expect = 5e-35
Identities = 51/280 (18%), Positives = 79/280 (28%), Gaps = 58/280 (20%)
Query: 277 PANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGS--ATRTCKE-GFWTGVAP 331
+CG P N T + I+Y C E + + + C + W+ +
Sbjct: 64 SQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEE 123
Query: 332 TCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVA 391
C R +L + G V
Sbjct: 124 FC---------------------------NRSCEVPTRLNSASLKQPYITQNYFPVGTVV 156
Query: 392 IYACHENYTLIG--ETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT-GSV 448
Y C Y + C KW+ C C P +I G + G G+
Sbjct: 157 EYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGAT 216
Query: 449 ATYSCEPGFILFGSNV--------------------NIDCGRLTAIPYGSISYLNETTYL 488
++SC G+ LFGS I C I G I +
Sbjct: 217 ISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGY 276
Query: 489 GSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEG 525
V Y+C++ + ++G C + WS P+C G
Sbjct: 277 RQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 316
Score = 108 bits (271), Expect = 6e-26
Identities = 42/208 (20%), Positives = 68/208 (32%), Gaps = 26/208 (12%)
Query: 664 DCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEG--HARRLCLENGTWSSGLPTC 720
DCG P VPN L ++ T + Y+C+E++ +CL+ WS C
Sbjct: 2 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 61
Query: 721 KGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQ 780
++ + N + +T T C +
Sbjct: 62 NRSQDCGLPPDVPNAQPAL------EGRTSFPEDTVITYKCEES---FVKIPGE------ 106
Query: 781 KVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVI---IMNQTTTYNSAVEYHCVPQ 837
+ C K WS I C P +++ + I + VEY C P
Sbjct: 107 --KDSVICLKGSQWSD-IEEFCNRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPG 163
Query: 838 YQRIGPYLRK--CMEDGSWSGDEPRCEK 863
Y+R K C+++ WS C+K
Sbjct: 164 YRREPSLSPKLTCLQNLKWSTAVEFCKK 191
Score = 88.1 bits (218), Expect = 4e-19
Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 38/158 (24%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWT 327
C+ +C +P N G+TIS++C G L GS + C W+
Sbjct: 188 FCK--KKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWS 245
Query: 328 GVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTH 387
P C+ + C I++G + E +
Sbjct: 246 DPLPECR-----------------------------EIYCPAPPQIDNGIIQGERDHYGY 276
Query: 388 GAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQC 422
YAC++ +T+IGE C D G+W+G P+C
Sbjct: 277 RQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPEC 314
Score = 55.0 bits (132), Expect = 5e-08
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Query: 805 DCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIG--PYLRKCMEDGSWSGDEPRC 861
DC P + N + + +T+ ++ + Y C + +I C++ WS E C
Sbjct: 2 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 61
Query: 862 EKRFNSGIPG 871
+ + G+P
Sbjct: 62 NRSQDCGLPP 71
Score = 46.1 bits (109), Expect = 3e-05
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTC----KEGFW 326
C+ C +P + N G +++YAC +G ++G + C EG W
Sbjct: 250 ECR--EIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 307
Query: 327 TGVAPTCQ 334
+G P C+
Sbjct: 308 SGPPPECR 315
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune
system; NMR {Mus musculus}
Length = 551
Score = 189 bits (480), Expect = 1e-51
Identities = 87/603 (14%), Positives = 147/603 (24%), Gaps = 172/603 (28%)
Query: 279 NCGSPDRHVNTTFVGTVST---KLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTCQ 334
+C +P + + + +G+ + Y C G + + TCK+ WT C
Sbjct: 2 HCPAPSQLPSAKPINLTDESMFPIGTYLLYECLPG-YIKRQFSITCKQDSTWTSAEDKCI 60
Query: 335 YFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYA 394
C E+G V + T G+ Y
Sbjct: 61 R-----------------------------KQCKTPSDPENGLVHV-HTGIEFGSRINYT 90
Query: 395 CHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSV 448
C++ Y LIG + VC W+ P C + C PP I G +S R G V
Sbjct: 91 CNQGYRLIGSSSAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMV 150
Query: 449 ATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRR 508
TY C + LVG P
Sbjct: 151 VTYRCNTD-------------------------------------ARGKALFNLVGEPSL 173
Query: 509 SCLESK----VWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDR 564
C + VWS P+C +C P ++++
Sbjct: 174 YCTSNDGEIGVWSGPPPQCI-----------------ELNKCTPPPYVENAVMLSENRS- 215
Query: 565 LYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK 624
+ + + +
Sbjct: 216 -----------------LFSLR--------------------------------DIVEF- 225
Query: 625 IGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFT--LTSNA 682
RC G+ ++G C+ W +P C +G
Sbjct: 226 -------RCHPGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKE 278
Query: 683 TYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLP 742
YYG V EC++ Y LEG ++ C +G+W+ L C
Sbjct: 279 YYYGENVTLECEDGYTLEGSSQSQCQSDGSWNPLLAKCV---------SRLADPEVPRDC 329
Query: 743 TCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCK 802
CK C ++ + K ++ + +W
Sbjct: 330 GCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVH 389
Query: 803 AIDCSHPGSIDNGRVIIMN----QTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDE 858
N ++ + + E+ C + K +
Sbjct: 390 TAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKA 449
Query: 859 PRC 861
P+
Sbjct: 450 PQL 452
Score = 160 bits (406), Expect = 9e-42
Identities = 56/266 (21%), Positives = 104/266 (39%), Gaps = 27/266 (10%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGG 675
+ + + + IG + Y C GY ++ + TC+ +W+ + +CI C P NG
Sbjct: 16 NLTDESMFPIGTYLLYECLPGY-IKRQFSITCKQDSTWTSAEDKCIRKQCKTPSDPENGL 74
Query: 676 FTLTSNATYYGTAVLYECDENYRLEGHARRLCL---ENGTWSSGLPTCKGNEGHARRLC- 731
+ +G+ + Y C++ YRL G + +C+ ++ W + P C+ C
Sbjct: 75 VHV-HTGIEFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPICE------WIPCE 127
Query: 732 ----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRT 787
+ NG + S + +T C + +F L + T
Sbjct: 128 IPPGIPNGDFFSS---TREDFHYGMVVT---YRCNTD---ARGKALFNLVGEPSLYCTSN 178
Query: 788 CTKRGTWSGHIPTCKAID-CSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYL 845
+ G WSG P C ++ C+ P ++N ++ N++ + VE+ C P + G
Sbjct: 179 DGEIGVWSGPPPQCIELNKCTPPPYVENAVMLSENRSLFSLRDIVEFRCHPGFIMKGASS 238
Query: 846 RKCMEDGSWSGDEPRCEKRFNSGIPG 871
C W + P C K +P
Sbjct: 239 VHCQSLNKWEPELPSCFKGVICRLPQ 264
Score = 139 bits (352), Expect = 6e-35
Identities = 56/272 (20%), Positives = 86/272 (31%), Gaps = 35/272 (12%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTL 678
+ G+ + Y C +GY++ G + C T W P C ++ C P +PNG F
Sbjct: 80 GIEFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFS 139
Query: 679 TSNATY-YGTAVLYECDEN------YRLEGHARRLCLEN----GTWSSGLPTCKGNEGHA 727
++ + YG V Y C+ + + L G C N G WS P C
Sbjct: 140 STREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIELNKCT 199
Query: 728 RRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRT 787
+EN S ++ C PG + +G + +
Sbjct: 200 PPPYVENAVMLSE------NRSLFSLRDIVEFRCHPG---FIMKG----------ASSVH 240
Query: 788 CTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTY--NSAVEYHCVPQYQRIGPYL 845
C W +P+C +G + Y V C Y G
Sbjct: 241 CQSLNKWEPELPSCFKGVICRLPQEMSGFQKGLGMKKEYYYGENVTLECEDGYTLEGSSQ 300
Query: 846 RKCMEDGSWSGDEPRCEKRFNSGIPGRSRRSP 877
+C DGSW+ +C R R
Sbjct: 301 SQCQSDGSWNPLLAKCVSRLADPEVPRDCGCK 332
Score = 131 bits (330), Expect = 4e-32
Identities = 75/447 (16%), Positives = 128/447 (28%), Gaps = 79/447 (17%)
Query: 276 NPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAP 331
C +P N + GS I+Y C +G L+GS++ C + W AP
Sbjct: 60 IRKQCKTPSDPENGLVHVHTGIEFGSRINYTCNQGYRLIGSSSAVCVITDQSVDWDTEAP 119
Query: 332 TCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVT-LETTRTTHGAV 390
C++ + C I +G +G V
Sbjct: 120 ICEW-----------------------------IPCEIPPGIPNGDFFSSTREDFHYGMV 150
Query: 391 AIYACHEN------YTLIGETRRVC----GDGGKWNGTEPQCL-FDWCAEPPQISGGIVT 439
Y C+ + + L+GE C G+ G W+G PQC+ + C PP + ++
Sbjct: 151 VTYRCNTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIELNKCTPPPYVENAVML 210
Query: 440 TSGRRT---GSVATYSCEPGFILFGSNVN-----------------IDCGRLTAIPYGSI 479
+ R + + C PGFI+ G++ RL G
Sbjct: 211 SENRSLFSLRDIVEFRCHPGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGFQ 270
Query: 480 SYLNETT--YLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNV 537
L Y G V C Y L G + C W+ KC ++
Sbjct: 271 KGLGMKKEYYYGENVTLECEDGYTLEGSSQSQCQSDGSWNPLLAKC------VSRLADPE 324
Query: 538 AVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD---SASSVATYKIGALPTLPAH 594
+ T+P S + + T+ T ++ +
Sbjct: 325 VPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVD 384
Query: 595 SILSVTGNDRLYGRTLIKT--ADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS 652
+ T + T + S + +++C P+
Sbjct: 385 DVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTK 444
Query: 653 WSGSVPECIYVDCGNPETVPNGGFTLT 679
P+ Y E + +LT
Sbjct: 445 GRPKAPQL-YTIPPPKEQMAKDKVSLT 470
Score = 109 bits (274), Expect = 4e-25
Identities = 49/220 (22%), Positives = 71/220 (32%), Gaps = 49/220 (22%)
Query: 665 CGNPETVPNGGFTLTSNATYY--GTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKG 722
C P +P+ ++ + + GT +LYEC Y C ++ TW+S C
Sbjct: 3 CPAPSQLPSAKPINLTDESMFPIGTYLLYECLPGYIK-RQFSITCKQDSTWTSAEDKCI- 60
Query: 723 NEGHARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQ 777
R+ C ENG G +R +C G Y G
Sbjct: 61 -----RKQCKTPSDPENGLVHVHTGIEFG--------SRINYTCNQG---YRLIG----- 99
Query: 778 NTQKVSYTRTCT---KRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYH 833
S + C + W P C+ I C P I NG + Y V Y
Sbjct: 100 -----SSSAVCVITDQSVDWDTEAPICEWIPCEIPPGIPNGDFFSSTREDFHYGMVVTYR 154
Query: 834 CVP------QYQRIGPYLRKCMED----GSWSGDEPRCEK 863
C + +G C + G WSG P+C +
Sbjct: 155 CNTDARGKALFNLVGEPSLYCTSNDGEIGVWSGPPPQCIE 194
Score = 100 bits (251), Expect = 3e-22
Identities = 47/284 (16%), Positives = 77/284 (27%), Gaps = 67/284 (23%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGN------MLVGSATRTC-- 321
IC+ C P N F + G ++Y C LVG + C
Sbjct: 120 ICE--WIPCEIPPGIPNGDFFSSTREDFHYGMVVTYRCNTDARGKALFNLVGEPSLYCTS 177
Query: 322 ---KEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTV 378
+ G W+G P C C ++E+ +
Sbjct: 178 NDGEIGVWSGPPPQCIEL----------------------------NKCTPPPYVENAVM 209
Query: 379 TLETTRT-THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGI 437
E + + + CH + + G + C KW P C PQ G
Sbjct: 210 LSENRSLFSLRDIVEFRCHPGFIMKGASSVHCQSLNKWEPELPSCFKGVICRLPQEMSGF 269
Query: 438 VTTSGRRT----GSVATYSCEPGFILFGSN-----------------VNIDCGRLTAIPY 476
G + G T CE G+ L GS+ V+
Sbjct: 270 QKGLGMKKEYYYGENVTLECEDGYTLEGSSQSQCQSDGSWNPLLAKCVSRLADPEVPRDC 329
Query: 477 GSISYLNETTYLGSEVLYS--CSRNYRLVGHPRRSCLESKVWSD 518
G + + S ++ + P+ +C+ + D
Sbjct: 330 GCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKD 373
>1qub_A Protein (human BETA2-glycoprotein I); short consensus repeat,
sushi, complement control protein, N glycosylation,
multi-domain, membrane adhesion; HET: NAG MAN; 2.70A
{Homo sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1
g.18.1.1 PDB: 1c1z_A* 1g4f_A 1g4g_A 2kri_A 3op8_A
Length = 319
Score = 177 bits (449), Expect = 1e-49
Identities = 76/447 (17%), Positives = 111/447 (24%), Gaps = 140/447 (31%)
Query: 367 CGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIG-ETRRVCGDGGKWNGTEPQCLFD 425
C K + + TV T G Y+C Y G + +C G W +C
Sbjct: 4 CPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPR 63
Query: 426 WCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNET 485
C + G V + + ++SC GF L G++
Sbjct: 64 VCPFAGILENGAVRYTTFEYPNTISFSCNTGFYLNGADS--------------------- 102
Query: 486 TYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIR 545
C E WS P C I
Sbjct: 103 ----------------------AKCTEEGKWSPELPVCA------------------PII 122
Query: 546 CPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRL 605
CP P++P + L V GN+ L
Sbjct: 123 CPPPSIPTFATLRVYK------------------------------------PSAGNNSL 146
Query: 606 YGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDC 665
Y T + C + + G TC G+W+ +PEC V C
Sbjct: 147 YRDT-------------------AVFECLPQHAMFGNDTITCTTHGNWTK-LPECREVKC 186
Query: 666 GNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNE 724
P NG + T Y + C + Y L+G C + G W S +P+CK +
Sbjct: 187 PFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNW-SAMPSCKASC 245
Query: 725 GHARRLCLENGTWSSGLPTCKGCKTPKKSL--TRPALSCLPGKRFYYHRGIFRLQNTQKV 782
+ G K L + + C
Sbjct: 246 KV---PVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNK---EKKCS---------- 289
Query: 783 SYTRTCTKRGTWSGHIPTCKAIDCSHP 809
GT +P C
Sbjct: 290 YTEDAQCIDGTIE--VPKCFKEHTDAS 314
Score = 160 bits (407), Expect = 6e-44
Identities = 60/250 (24%), Positives = 86/250 (34%), Gaps = 33/250 (13%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLS-TCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTS 680
Y+ G + Y C+ GY G C TG W + +C C + NG T+
Sbjct: 21 FYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTPRVCPFAGILENGAVRYTT 80
Query: 681 NATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLC-----LENG 735
Y + + C+ + L G C E G WS LP C +C
Sbjct: 81 --FEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCA------PIICPPPSIPTFA 132
Query: 736 TWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWS 795
T P+ + + CLP + T TCT G W+
Sbjct: 133 TLRVYKPSAGNNSLYRDTAV---FECLPQ---------HAMFGND----TITCTTHGNWT 176
Query: 796 GHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMEDGSW 854
+P C+ + C P DNG V + T Y + C Y GP +C + G+W
Sbjct: 177 K-LPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKATFGCHDGYSLDGPEEIECTKLGNW 235
Query: 855 SGDEPRCEKR 864
S P C+
Sbjct: 236 SA-MPSCKAS 244
Score = 152 bits (385), Expect = 5e-41
Identities = 61/419 (14%), Positives = 102/419 (24%), Gaps = 130/419 (31%)
Query: 280 CGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATR-TCKE-GFWTGVAPTCQYF 336
C PD +T V + + G I+Y+C G + G + C G W C
Sbjct: 4 CPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCTP- 62
Query: 337 QLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACH 396
C +E+G V T + ++C+
Sbjct: 63 ----------------------------RVCPFAGILENGAVRYTT--FEYPNTISFSCN 92
Query: 397 ENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT------GSVAT 450
+ L G C + GKW+ P C C P + + A
Sbjct: 93 TGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAV 152
Query: 451 YSCEPGFILFGSN----------------VNIDCGRLTAIPYGSISYLNETTY-LGSEVL 493
+ C P +FG++ + C + G ++Y + T +
Sbjct: 153 FECLPQHAMFGNDTITCTTHGNWTKLPECREVKCPFPSRPDNGFVNYPAKPTLYYKDKAT 212
Query: 494 YSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPA 553
+ C Y L G C + WS P C+ C P A
Sbjct: 213 FGCHDGYSLDGPEEIECTKLGNWSAM-PSCKA-------------------SCKVPVKKA 252
Query: 554 HSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKT 613
+ +R+ + K ++
Sbjct: 253 TVVYQ---GERVKIQEKFKNGMLHGDKVSFF----------------------------- 280
Query: 614 ADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVP 672
C+ K G+ VP+C + P
Sbjct: 281 -------------------CKNKEKKCSYTEDAQCIDGTI--EVPKCFKEHTDASDVKP 318
Score = 140 bits (355), Expect = 5e-37
Identities = 52/260 (20%), Positives = 83/260 (31%), Gaps = 47/260 (18%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT-- 679
T++ + + C G+ + G + C + G WS +P C + C P +
Sbjct: 80 TFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKP 139
Query: 680 --SNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLC-----L 732
N + Y ++EC + + G+ C +G W + LP C+ C
Sbjct: 140 SAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGNW-TKLPECR------EVKCPFPSRP 192
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
+NG + K K T C G Y G CTK G
Sbjct: 193 DNGFVNYP---AKPTLYYKDKAT---FGCHDG---YSLDG----------PEEIECTKLG 233
Query: 793 TWSGHIPTCKAIDCSHPGSIDNGRV--------IIMNQTTTYNSAVEYHCVPQYQRIGPY 844
WS +P+CKA C P + V + C + ++
Sbjct: 234 NWSA-MPSCKAS-CKVPVKKATVVYQGERVKIQEKFKNGMLHGDKVSFFCKNKEKKCSYT 291
Query: 845 LRKCMEDGSWSGDEPRCEKR 864
DG+ P+C K
Sbjct: 292 EDAQCIDGTIE--VPKCFKE 309
Score = 128 bits (323), Expect = 9e-33
Identities = 46/284 (16%), Positives = 74/284 (26%), Gaps = 64/284 (22%)
Query: 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTCQY 335
P C N T + + +TIS++C G L G+ + C E G W+ P C
Sbjct: 62 PRVCPFAGILENGAVRYT-TFEYPNTISFSCNTGFYLNGADSAKCTEEGKWSPELPVCA- 119
Query: 336 FQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT----THGAVA 391
+ C T+ + + A
Sbjct: 120 ----------------------------PIICPPPSIPTFATLRVYKPSAGNNSLYRDTA 151
Query: 392 IYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GSV 448
++ C + + G C G W P+C C P + G V + T
Sbjct: 152 VFECLPQHAMFGNDTITCTTHGNWTKL-PECREVKCPFPSRPDNGFVNYPAKPTLYYKDK 210
Query: 449 ATYSCEPGFILFGSN-----------------------VNIDCGRLTAIPYGSISYLNET 485
AT+ C G+ L G V
Sbjct: 211 ATFGCHDGYSLDGPEEIECTKLGNWSAMPSCKASCKVPVKKATVVYQGERVKIQEKFKNG 270
Query: 486 TYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATK 529
G +V + C + + + + PKC + T
Sbjct: 271 MLHGDKVSFFCKNKEKKCSYTEDAQCID--GTIEVPKCFKEHTD 312
Score = 118 bits (298), Expect = 2e-29
Identities = 42/204 (20%), Positives = 65/204 (31%), Gaps = 29/204 (14%)
Query: 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRL-CLENGTWSSGLPTCKGN 723
C P+ +P G + Y C Y G R+ C G W C
Sbjct: 4 CPKPDDLPFSTVVPLKTFYEPGEEITYSCKPGYVSRGGMRKFICPLTGLWPINTLKCT-- 61
Query: 724 EGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVS 783
R+C G +G +++ SC G +Y G +
Sbjct: 62 ----PRVCPFAGILENGAVRY-TTFEYPNTIS---FSCNTG---FYLNG----------A 100
Query: 784 YTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT----TYNSAVEYHCVPQYQ 839
+ CT+ G WS +P C I C P + + + Y + C+PQ+
Sbjct: 101 DSAKCTEEGKWSPELPVCAPIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHA 160
Query: 840 RIGPYLRKCMEDGSWSGDEPRCEK 863
G C G+W+ P C +
Sbjct: 161 MFGNDTITCTTHGNWTK-LPECRE 183
Score = 90.8 bits (225), Expect = 6e-20
Identities = 37/214 (17%), Positives = 61/214 (28%), Gaps = 51/214 (23%)
Query: 272 ICQHNPANCGSPD-----RHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GF 325
+C P C P ++ T + C + + G+ T TC G
Sbjct: 117 VCA--PIICPPPSIPTFATLRVYKPSAGNNSLYRDTAVFECLPQHAMFGNDTITCTTHGN 174
Query: 326 WTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT 385
WT + P C+ V C ++G V T
Sbjct: 175 WTKL-PECRE-----------------------------VKCPFPSRPDNGFVNYPAKPT 204
Query: 386 -THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVT----- 439
+ A + CH+ Y+L G C G W+ P C C P + + +
Sbjct: 205 LYYKDKATFGCHDGYSLDGPEEIECTKLGNWSAM-PSCKAS-CKVPVKKATVVYQGERVK 262
Query: 440 -----TSGRRTGSVATYSCEPGFILFGSNVNIDC 468
+G G ++ C+ + C
Sbjct: 263 IQEKFKNGMLHGDKVSFFCKNKEKKCSYTEDAQC 296
>3o8e_B Membrane cofactor protein; short consensus repeat, complement
control protein, fiber KN virus-receptor interaction,
cell adhesion-immunity complex; HET: NAG; 2.84A {Homo
sapiens} PDB: 2o39_C* 1ckl_A* 3inb_C* 3l89_M*
Length = 252
Score = 170 bits (431), Expect = 5e-48
Identities = 55/254 (21%), Positives = 83/254 (32%), Gaps = 21/254 (8%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLS--TCEDTGSWSG-SVPECIYVDCGNPETVP 672
Y+IG V Y+C++GY + C+ +W S C C
Sbjct: 13 IGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDACYRETCPYIRDPL 72
Query: 673 NGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT---WSSGLPTCKGNEGHARR 729
NG + +G + + C+E Y L G C G+ WS P C+ +
Sbjct: 73 NGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICE------KV 126
Query: 730 LCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCT 789
LC +G T + L SC P F L T C
Sbjct: 127 LCTPPPKIKNGKHTF-SEVEVFEYLDAVTYSCDPA----PGPDPFSLIG----ESTIYCG 177
Query: 790 KRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCM 849
WS P CK + C P + ++ + Y + V + C + G C
Sbjct: 178 DNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDKGFYLDGSDTIVCD 237
Query: 850 EDGSWSGDEPRCEK 863
+ +W P+C K
Sbjct: 238 SNSTWDPPVPKCLK 251
Score = 146 bits (370), Expect = 1e-39
Identities = 54/326 (16%), Positives = 85/326 (26%), Gaps = 107/326 (32%)
Query: 427 CAEPPQISGGIVTTSGRRT---GSVATYSCEPGFILFGSNVN------------------ 465
C EPP + + G Y C+ G+
Sbjct: 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC 60
Query: 466 --IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTA 520
C + G N T G ++ + C+ Y L+G C +WS
Sbjct: 61 YRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKP 120
Query: 521 PKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSV 580
P CE ++ C P + + + +
Sbjct: 121 PICE------------------KVLCTPPPKIKNGKHTFSEVE----------------- 145
Query: 581 ATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG---- 636
++ TY C+
Sbjct: 146 -VFEYL--------------------------------DAVTY--------SCDPAPGPD 164
Query: 637 -YKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDE 695
+ + GE C D WS + PEC V C P + YY V++ECD+
Sbjct: 165 PFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKKFYYKATVMFECDK 224
Query: 696 NYRLEGHARRLCLENGTWSSGLPTCK 721
+ L+G +C N TW +P C
Sbjct: 225 GFYLDGSDTIVCDSNSTWDPPVPKCL 250
Score = 143 bits (363), Expect = 8e-39
Identities = 55/279 (19%), Positives = 79/279 (28%), Gaps = 63/279 (22%)
Query: 280 CGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVG--SATRTCKE-GFWTGVA-PTC 333
C P +G ++G + Y C +G + + C W V+ C
Sbjct: 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC 60
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIY 393
C + +G G +
Sbjct: 61 YR-----------------------------ETCPYIRDPLNGQAVPANGTYEFGYQMHF 91
Query: 394 ACHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT---GS 447
C+E Y LIGE C G W+G P C C PP+I G T S
Sbjct: 92 ICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLD 151
Query: 448 VATYSCEPG-----FILFGSNV-----------------NIDCGRLTAIPYGSISYLNET 485
TYSC+P F L G + + C IS +
Sbjct: 152 AVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVVKCRFPVVENGKQISGFGKK 211
Query: 486 TYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCE 524
Y + V++ C + + L G C + W PKC
Sbjct: 212 FYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCL 250
Score = 120 bits (301), Expect = 2e-30
Identities = 39/233 (16%), Positives = 64/233 (27%), Gaps = 50/233 (21%)
Query: 367 CGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIGE--TRRVCGDGGKWNGT-EPQC 422
C + E + + G Y C + Y I T +C W + C
Sbjct: 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC 60
Query: 423 LFDWCAEPPQISGGIVTTSGRRT--GSVATYSCEPGFILFGSNV---------------- 464
+ C G + G + C G+ L G +
Sbjct: 61 YRETCPYIRDPLNGQAVPANGTYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKP 120
Query: 465 ----NIDCGRLTAIPYGSISYLNETTY-LGSEVLYSC-----SRNYRLVGHPRRSCLESK 514
+ C I G ++ + V YSC + L+G C ++
Sbjct: 121 PICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNS 180
Query: 515 VWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYG 567
VWS AP+C+ ++C P + +S G Y
Sbjct: 181 VWSRAAPECK------------------VVKCRFPVVENGKQISGFGKKFYYK 215
Score = 117 bits (294), Expect = 2e-29
Identities = 55/192 (28%), Positives = 71/192 (36%), Gaps = 30/192 (15%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTL 678
TY+ G + + C GY + GE + CE GS WSG P C V C P + NG T
Sbjct: 82 TYEFGYQMHFICNEGYYLIGEEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTF 141
Query: 679 TSNATY-YGTAVLYECD-----ENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCL 732
+ + Y AV Y CD + + L G + C +N WS P CK R +
Sbjct: 142 SEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECK--VVKCRFPVV 199
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
ENG SG C G +Y G S T C
Sbjct: 200 ENGKQISG------FGKKFYYKATVMFECDKG---FYLDG----------SDTIVCDSNS 240
Query: 793 TWSGHIPTCKAI 804
TW +P C +
Sbjct: 241 TWDPPVPKCLKV 252
Score = 113 bits (285), Expect = 2e-28
Identities = 49/218 (22%), Positives = 63/218 (28%), Gaps = 44/218 (20%)
Query: 665 CGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHA--RRLCLENGTWSSG-LPTC 720
C P T Y G V Y+C + Y +C N TW C
Sbjct: 1 CEEPPTFEAMELIGKPKPYYEIGERVDYKCKKGYFYIPPLATHTICDRNHTWLPVSDDAC 60
Query: 721 KGNEGHARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFR 775
R C NG G + C G YY G
Sbjct: 61 Y------RETCPYIRDPLNGQAVP----ANGTYEFGYQMH---FICNEG---YYLIG--- 101
Query: 776 LQNTQKVSYTRTCTKRGT---WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVE 831
C +G+ WSG P C+ + C+ P I NG+ Y AV
Sbjct: 102 -------EEILYCELKGSVAIWSGKPPICEKVLCTPPPKIKNGKHTFSEVEVFEYLDAVT 154
Query: 832 YHCVP-----QYQRIGPYLRKCMEDGSWSGDEPRCEKR 864
Y C P + IG C ++ WS P C+
Sbjct: 155 YSCDPAPGPDPFSLIGESTIYCGDNSVWSRAAPECKVV 192
Score = 81.1 bits (200), Expect = 4e-17
Identities = 27/160 (16%), Positives = 49/160 (30%), Gaps = 39/160 (24%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGN-----MLVGSATRTCKE- 323
IC+ C P + N + + ++Y+C L+G +T C +
Sbjct: 122 ICE--KVLCTPPPKIKNGKHTFSEVEVFEYLDAVTYSCDPAPGPDPFSLIGESTIYCGDN 179
Query: 324 GFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETT 383
W+ AP C+ V C ++
Sbjct: 180 SVWSRAAPECKV-----------------------------VKCRFPVVENGKQISGFGK 210
Query: 384 RTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL 423
+ + A ++ C + + L G VC W+ P+CL
Sbjct: 211 KFYYKATVMFECDKGFYLDGSDTIVCDSNSTWDPPVPKCL 250
>2xrb_A Complement regulatory protein CRRY; immune system, immunology;
2.50A {Rattus norvegicus} PDB: 2xrd_A
Length = 290
Score = 162 bits (411), Expect = 9e-45
Identities = 52/251 (20%), Positives = 95/251 (37%), Gaps = 16/251 (6%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGG 675
+ + +T+ +G +KY C GY ++ + TCE W+ CI C P NG
Sbjct: 51 NPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGI 109
Query: 676 FTLTSNATYYGTAVLYECDENYRLEGHARRLCL---ENGTWSSGLPTCKGNEGHARRLCL 732
+ ++ +G+++ Y C+E YRL G + +C+ ++ W + P C+ C
Sbjct: 110 VHVNTD-IRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICE------SIPCE 162
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
+ +G + C + +F L + T + G
Sbjct: 163 IPPSIPNGDFFS-PNREDFHYGMVVTYQCNTD---ARGKKLFNLVGEPSIHCTSIDGQVG 218
Query: 793 TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMED 851
WSG P C ++ P ++N ++ N++ + VE+ C + G C
Sbjct: 219 VWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSL 278
Query: 852 GSWSGDEPRCE 862
W P C
Sbjct: 279 NRWEPQLPSCA 289
Score = 148 bits (374), Expect = 7e-40
Identities = 62/365 (16%), Positives = 94/365 (25%), Gaps = 114/365 (31%)
Query: 395 CHENYTLIGETRRVCGDGGKWNGTEPQCL---FDWCAEPPQISGGIVTTSGRRT----GS 447
+G C G C PP + G+
Sbjct: 3 ASSPLDPVGRLVAFCRGGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGT 62
Query: 448 VATYSCEPGFILFGSNV----------------NIDCGRLTAIPYGSISYLNETTYLGSE 491
Y C PG+I ++ C G + + + GS
Sbjct: 63 SLKYECRPGYIKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVNTDIRF-GSS 121
Query: 492 VLYSCSRNYRLVGHPRRSCL---ESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPE 548
+ Y+C+ YRL+G C+ +S W AP CE I C
Sbjct: 122 ITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICE------------------SIPCEI 163
Query: 549 PTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGR 608
P + S D YG
Sbjct: 164 PPSIPN---------------------------------------GDFFSPNREDFHYG- 183
Query: 609 TLIKTADSASSVATYKIGALVKYRCERG------YKVEGEPLSTC----EDTGSWSGSVP 658
V TY +C + + GEP C G WSG P
Sbjct: 184 ----------MVVTY--------QCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPP 225
Query: 659 ECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGL 717
+CI ++ P V N + + + V + C + + ++G + C W L
Sbjct: 226 QCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQL 285
Query: 718 PTCKG 722
P+C
Sbjct: 286 PSCAA 290
Score = 136 bits (344), Expect = 7e-36
Identities = 56/311 (18%), Positives = 86/311 (27%), Gaps = 70/311 (22%)
Query: 254 GRGWLWNDVGCKLDYLHWICQHN-PANCGSPDRHVNTTFVGTVST---KLGSTISYACPE 309
GR + G L L + C +P + +G+++ Y C
Sbjct: 11 GRLVAFCRGGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRP 70
Query: 310 GNMLVGSATRTCKE-GFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCG 368
G + + TC+ WT C C
Sbjct: 71 GY-IKRQFSITCEVNSVWTSPQDVCI-----------------------------RKQCE 100
Query: 369 KLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQCLFD 425
++G V + T G+ Y C+E Y LIG + +C W+ P C
Sbjct: 101 TPLDPQNGIVHVNTD-IRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESI 159
Query: 426 WCAEPPQISGGIVTTSGRRT---GSVATYSCEPG------FILFGSN------------- 463
C PP I G + R G V TY C F L G
Sbjct: 160 PCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGV 219
Query: 464 --------VNIDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLESK 514
+ ++ + I N++ + L V + C + + G C
Sbjct: 220 WSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLN 279
Query: 515 VWSDTAPKCEG 525
W P C
Sbjct: 280 RWEPQLPSCAA 290
Score = 127 bits (319), Expect = 2e-32
Identities = 60/389 (15%), Positives = 89/389 (22%), Gaps = 138/389 (35%)
Query: 307 CPEGNMLVGSATRTCKE-GFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNV 365
VG C+ +
Sbjct: 3 ASSPLDPVGRLVAFCRGGVHLAVLLLFLS--------------------------PSTLG 36
Query: 366 DCGKLEHIEHGTVTLETTRTT--HGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL 423
C + T +T G Y C Y + + C W + C+
Sbjct: 37 QCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVCI 95
Query: 424 FDWCAEPPQISGGIVTTSGRRT-GSVATYSCEPGFILFGSNVN----------------- 465
C P GIV + GS TY+C G+ L GS+
Sbjct: 96 RKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPI 155
Query: 466 ---IDCGRLTAIPYGSISYLNETTYL-GSEVLYSC------SRNYRLVGHPRRSCLESK- 514
I C +IP G N + G V Y C + + LVG P C
Sbjct: 156 CESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDG 215
Query: 515 ---VWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLI 571
VWS P+C E+ P
Sbjct: 216 QVGVWSGPPPQCI------------------ELNKCTP---------------------- 235
Query: 572 KTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKY 631
P + I+S + + +
Sbjct: 236 -----------------PHVENAVIVSKNKSLFSLR-----------DMVEF-------- 259
Query: 632 RCERGYKVEGEPLSTCEDTGSWSGSVPEC 660
RC+ G+ ++G+ C W +P C
Sbjct: 260 RCQDGFMMKGDSSVYCRSLNRWEPQLPSC 288
Score = 122 bits (306), Expect = 7e-31
Identities = 50/242 (20%), Positives = 77/242 (31%), Gaps = 42/242 (17%)
Query: 641 GEPLSTCEDTGSWSGSVPECI---YVDCGNPETVPNGGFTLTSNATYY--GTAVLYECDE 695
G ++ C + + C P P ++ + + GT++ YEC
Sbjct: 11 GRLVAFCRGGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRP 70
Query: 696 NYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLT 755
Y ++ C N W+S C R+ C +G+ S+T
Sbjct: 71 GY-IKRQFSITCEVNSVWTSPQDVCI------RKQCETPLDPQNGIVHVNTDIRFGSSIT 123
Query: 756 RPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKR---GTWSGHIPTCKAIDCSHPGSI 812
+C G Y G S + C W P C++I C P SI
Sbjct: 124 ---YTCNEG---YRLIG----------SSSAMCIISDQSVAWDAEAPICESIPCEIPPSI 167
Query: 813 DNGRVIIMNQTT-TYNSAVEYHCVP------QYQRIGPYLRKCM----EDGSWSGDEPRC 861
NG N+ Y V Y C + +G C + G WSG P+C
Sbjct: 168 PNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQC 227
Query: 862 EK 863
+
Sbjct: 228 IE 229
Score = 108 bits (270), Expect = 4e-26
Identities = 54/328 (16%), Positives = 91/328 (27%), Gaps = 60/328 (18%)
Query: 496 CSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHS 555
S VG C + + E T P +
Sbjct: 3 ASSPLDPVGRLVAFCRGGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGT 62
Query: 556 ILSVTGND--RLYGRTLIKTADSASSVATYKIGAL----PTLPAHSILSVTGNDRLYGRT 609
L ++ +S + P P + I+ V +
Sbjct: 63 SLKYECRPGYIKRQFSITCEVNSVWTSPQDVCIRKQCETPLDPQNGIVHVNTD------- 115
Query: 610 LIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCED---TGSWSGSVPECIYVDCG 666
+ G+ + Y C GY++ G + C + +W P C + C
Sbjct: 116 -------------IRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCE 162
Query: 667 NPETVPNGGFTLTSNATY-YGTAVLYECDEN------YRLEGHARRLCL----ENGTWSS 715
P ++PNG F + + YG V Y+C+ + + L G C + G WS
Sbjct: 163 IPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSG 222
Query: 716 GLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFR 775
P C +EN S K + + + C G + +G
Sbjct: 223 PPPQCIELN-KCTPPHVENAVIVSK---NKSLFSLRDMVE---FRCQDG---FMMKG--- 269
Query: 776 LQNTQKVSYTRTCTKRGTWSGHIPTCKA 803
+ C W +P+C A
Sbjct: 270 -------DSSVYCRSLNRWEPQLPSCAA 290
Score = 97.4 bits (242), Expect = 3e-22
Identities = 32/175 (18%), Positives = 50/175 (28%), Gaps = 21/175 (12%)
Query: 692 ECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPK 751
E G C + L + C + P ++
Sbjct: 2 EASSPLDPVGRLVAFCRGGVHLAVLLLFLSPS---TLGQCPAPPLFPYAKPINPTDESTF 58
Query: 752 KSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGS 811
T C PG Y + ++ TC W+ C C P
Sbjct: 59 PVGTSLKYECRPG----YIKR----------QFSITCEVNSVWTSPQDVCIRKQCETPLD 104
Query: 812 IDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCM---EDGSWSGDEPRCEK 863
NG V + N + S++ Y C Y+ IG C+ + +W + P CE
Sbjct: 105 PQNGIVHV-NTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICES 158
Score = 66.2 bits (161), Expect = 7e-12
Identities = 12/87 (13%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Query: 783 SYTRTCTKRGTWSGHIPTCKAI---DCSHPGSIDNGRVIIMNQTTTY--NSAVEYHCVPQ 837
C + + C P + I +T+ ++++Y C P
Sbjct: 12 RLVAFCRGGVHLAVLLLFLSPSTLGQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPG 71
Query: 838 YQRIGPYLRKCMEDGSWSGDEPRCEKR 864
Y + C + W+ + C ++
Sbjct: 72 Y-IKRQFSITCEVNSVWTSPQDVCIRK 97
>1ntj_A Complement receptor related protein; immunology, glycoprotein, SCR,
CCP, immune system; NMR {Rattus norvegicus}
Length = 320
Score = 162 bits (411), Expect = 2e-44
Identities = 71/395 (17%), Positives = 109/395 (27%), Gaps = 115/395 (29%)
Query: 365 VDCGKLEHIEHGTVTLETTRTT--HGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQC 422
C + T +T G Y C Y + C W + C
Sbjct: 3 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGYIK-RQFSITCEVNSVWTSPQDVC 61
Query: 423 LFDWCAEPPQISGGIVTTSGRRT-GSVATYSCEPGFILFGSNV----------------- 464
+ C P GIV + GS TY+C G+ L GS+
Sbjct: 62 IRKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAP 121
Query: 465 ---NIDCGRLTAIPYGSISYLNETTY-LGSEVLYSC------SRNYRLVGHPRRSCLESK 514
+I C +IP G N + G V Y C + + LVG P C
Sbjct: 122 ICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSID 181
Query: 515 ----VWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTL 570
VWS P+C E+ P
Sbjct: 182 GQVGVWSGPPPQCI------------------ELNKCTP--------------------- 202
Query: 571 IKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVK 630
P + I+S + + +
Sbjct: 203 ------------------PHVENAVIVSKNKSLFSLR-----------DMVEF------- 226
Query: 631 YRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPE-TVPNGGFTLTSNATYYGTAV 689
RC+ G+ ++G+ C W +P C V G G V
Sbjct: 227 -RCQDGFMMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFVPQNLQLGAKV 285
Query: 690 LYECDENYRLEGHARRLCLENGT---WSSGLPTCK 721
+ C+ Y+L+G++ C+ +G W+S +P C+
Sbjct: 286 TFVCNTGYQLKGNSSSHCVLDGVESIWNSSVPVCE 320
Score = 161 bits (408), Expect = 4e-44
Identities = 54/252 (21%), Positives = 95/252 (37%), Gaps = 16/252 (6%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGG 675
+ + +T+ +G +KY C GY + TCE W+ CI C P NG
Sbjct: 18 NPTDESTFPVGTSLKYECRPGYIKRQFSI-TCEVNSVWTSPQDVCIRKQCETPLDPQNGI 76
Query: 676 FTLTSNATYYGTAVLYECDENYRLEGHARRLCL---ENGTWSSGLPTCKGNEGHARRLCL 732
+ ++ +G+++ Y C+E YRL G + +C+ ++ W + P C+ +
Sbjct: 77 VHVNTD-IRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPS-I 134
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
NG + S + C + +F L + T + G
Sbjct: 135 PNGDFFSP------NREDFHYGMVVTYQCNTD---ARGKKLFNLVGEPSIHCTSIDGQVG 185
Query: 793 TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMED 851
WSG P C ++ P ++N ++ N++ + VE+ C + G C
Sbjct: 186 VWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSL 245
Query: 852 GSWSGDEPRCEK 863
W P C K
Sbjct: 246 NRWEPQLPSCFK 257
Score = 146 bits (369), Expect = 8e-39
Identities = 73/407 (17%), Positives = 116/407 (28%), Gaps = 122/407 (29%)
Query: 427 CAEPPQISGGIVTTSGRRT----GSVATYSCEPGFILFGSNVN----------------I 466
C PP + G+ Y C PG+I ++
Sbjct: 5 CPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGYIKRQFSITCEVNSVWTSPQDVCIRK 64
Query: 467 DCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCL---ESKVWSDTAPKC 523
C G + + + GS + Y+C+ YRL+G C+ +S W AP C
Sbjct: 65 QCETPLDPQNGIVHVNTDIRF-GSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPIC 123
Query: 524 EGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATY 583
E I C P
Sbjct: 124 E------------------SIPCEIP---------------------------------- 131
Query: 584 KIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEP 643
P++P S D YG V TY+ R ++ + + GEP
Sbjct: 132 -----PSIPNGDFFSPNREDFHYG-----------MVVTYQCNT--DARGKKLFNLVGEP 173
Query: 644 LSTC----EDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYR 698
C G WSG P+CI ++ P V N + + + V + C + +
Sbjct: 174 SIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSKNKSLFSLRDMVEFRCQDGFM 233
Query: 699 LEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPA 758
++G + C W LP+C + G +G +T
Sbjct: 234 MKGDSSVYCRSLNRWEPQLPSCFKV----KSCGAFLGELPNGHVFVPQNLQLGAKVT--- 286
Query: 759 LSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGT---WSGHIPTCK 802
C G Y +G + + C G W+ +P C+
Sbjct: 287 FVCNTG---YQLKG----------NSSSHCVLDGVESIWNSSVPVCE 320
Score = 140 bits (354), Expect = 7e-37
Identities = 54/260 (20%), Positives = 88/260 (33%), Gaps = 40/260 (15%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCED---TGSWSGSVPECIYVDCGNPETVPNGGFTL 678
+ G+ + Y C GY++ G + C + +W P C + C P ++PNG F
Sbjct: 82 DIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFS 141
Query: 679 TSNATY-YGTAVLYECDEN------YRLEGHARRLCL----ENGTWSSGLPTCKGNEGHA 727
+ + YG V Y+C+ + + L G C + G WS P C
Sbjct: 142 PNREDFHYGMVVTYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCI------ 195
Query: 728 RRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRT 787
+ + K+ C G + +G +
Sbjct: 196 ELNKCTPPHVENAVIVS-KNKSLFSLRDMVEFRCQDG---FMMKG----------DSSVY 241
Query: 788 CTKRGTWSGHIPTCKAID--CSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYL 845
C W +P+C + + G + NG V + Q + V + C YQ G
Sbjct: 242 CRSLNRWEPQLPSCFKVKSCGAFLGELPNGHVFV-PQNLQLGAKVTFVCNTGYQLKGNSS 300
Query: 846 RKCMEDGS---WSGDEPRCE 862
C+ DG W+ P CE
Sbjct: 301 SHCVLDGVESIWNSSVPVCE 320
Score = 131 bits (330), Expect = 9e-34
Identities = 57/288 (19%), Positives = 99/288 (34%), Gaps = 70/288 (24%)
Query: 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAPT 332
C +P N + GS+I+Y C EG L+GS++ C + W AP
Sbjct: 63 RKQCETPLDPQNGIVHVNTDIRFGSSITYTCNEGYRLIGSSSAMCIISDQSVAWDAEAPI 122
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVT-LETTRTTHGAVA 391
C+ ++ C I +G +G V
Sbjct: 123 CE-----------------------------SIPCEIPPSIPNGDFFSPNREDFHYGMVV 153
Query: 392 IYACHEN------YTLIGETRRVC----GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTS 441
Y C+ + + L+GE C G G W+G PQC+ PP + ++ +
Sbjct: 154 TYQCNTDARGKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIELNKCTPPHVENAVIVSK 213
Query: 442 GRRT---GSVATYSCEPGFILFGSN-------------------VNIDCGRLTAIPYGSI 479
+ + + C+ GF++ G + V L +P G +
Sbjct: 214 NKSLFSLRDMVEFRCQDGFMMKGDSSVYCRSLNRWEPQLPSCFKVKSCGAFLGELPNGHV 273
Query: 480 SYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCE 524
G++V + C+ Y+L G+ C+ +W+ + P CE
Sbjct: 274 FVPQNLQL-GAKVTFVCNTGYQLKGNSSSHCVLDGVESIWNSSVPVCE 320
Score = 104 bits (260), Expect = 2e-24
Identities = 46/214 (21%), Positives = 70/214 (32%), Gaps = 33/214 (15%)
Query: 663 VDCGNPETVPNGGFTLTSNATYY--GTAVLYECDENYRLEGHARRLCLENGTWSSGLPTC 720
C P P ++ + + GT++ YEC Y C N W+S C
Sbjct: 3 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGYIK-RQFSITCEVNSVWTSPQDVC 61
Query: 721 KGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQ 780
R+ C +G+ S+T +C G +RL +
Sbjct: 62 I------RKQCETPLDPQNGIVHVNTDIRFGSSIT---YTCNEG---------YRLIGS- 102
Query: 781 KVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVP--- 836
+ + W P C++I C P SI NG N+ Y V Y C
Sbjct: 103 SSAMCIISDQSVAWDAEAPICESIPCEIPPSIPNGDFFSPNREDFHYGMVVTYQCNTDAR 162
Query: 837 ---QYQRIGPYLRKCM----EDGSWSGDEPRCEK 863
+ +G C + G WSG P+C +
Sbjct: 163 GKKLFNLVGEPSIHCTSIDGQVGVWSGPPPQCIE 196
Score = 49.2 bits (117), Expect = 3e-06
Identities = 11/63 (17%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 804 IDCSHPGSIDNGRVIIMNQTTTY--NSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRC 861
C P + I +T+ ++++Y C P Y + C + W+ + C
Sbjct: 3 GQCPAPPLFPYAKPINPTDESTFPVGTSLKYECRPGY-IKRQFSITCEVNSVWTSPQDVC 61
Query: 862 EKR 864
++
Sbjct: 62 IRK 64
>2wii_C H factor 1, complement factor H; immune system, sushi, secreted,
polymorphism, glycoprotein, complement system,
complement pathway, immune response; HET: NAG BMA; 2.70A
{Homo sapiens} PDB: 2rlp_A 2rlq_A
Length = 277
Score = 157 bits (398), Expect = 4e-43
Identities = 63/253 (24%), Positives = 86/253 (33%), Gaps = 32/253 (12%)
Query: 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTG-SWSGSVPECIYVDCGNPETVPNGGF 676
S TY G Y+C GY+ G + C + +C CG+P P G F
Sbjct: 24 WSDQTYPEGTQAIYKCRPGYRSLGNIIMVCRKGEWVALNPLRKCQKRPCGHPGDTPFGTF 83
Query: 677 TLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLC---- 731
TLT + YG +Y C+E Y+L G + W++ +P C+ C
Sbjct: 84 TLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICE------VVKCLPVT 137
Query: 732 -LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTK 790
ENG S +++ C G Y G C+
Sbjct: 138 APENGKIVSSAMEPDREYHFGQAVR---FVCNSG---YKIEG----------DEEMHCSD 181
Query: 791 RGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCME 850
G WS P C I C P + NG I N +Y C Y+ C E
Sbjct: 182 DGFWSKEKPKCVEISCKSPD-VINGSPISQKIIYKENERFQYKCNMGYEYSERGDAVCTE 240
Query: 851 DGSWSGDEPRCEK 863
G W P CE+
Sbjct: 241 SG-WRP-LPSCEE 251
Score = 150 bits (380), Expect = 1e-40
Identities = 64/383 (16%), Positives = 110/383 (28%), Gaps = 120/383 (31%)
Query: 364 NVDCGKLEHIEHGTV---TLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEP 420
DC +L + + + G AIY C Y +G VC G W P
Sbjct: 5 AEDCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCRKGE-WVALNP 63
Query: 421 QCLFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSIS 480
C+ CG P+G+ +
Sbjct: 64 LR-----------------------------KCQK----------RPCGHPGDTPFGTFT 84
Query: 481 YLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAV 539
+ G + +Y+C+ Y+L+G ++ W++ P CE
Sbjct: 85 LTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGWTNDIPICE--------------- 129
Query: 540 DRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALPTLPAHSILSV 599
++C T P + + + +
Sbjct: 130 ---VVKCLPVTAPENGKIVSSAMEP----------------------------------- 151
Query: 600 TGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPE 659
+ +G + C GYK+EG+ C D G WS P+
Sbjct: 152 -DREYHFG-----------QAVRF--------VCNSGYKIEGDEEMHCSDDGFWSKEKPK 191
Query: 660 CIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPT 719
C+ + C +P+ V NG Y+C+ Y +C E+G W LP+
Sbjct: 192 CVEISCKSPD-VINGSPISQKIIYKENERFQYKCNMGYEYSERGDAVCTESG-WRP-LPS 248
Query: 720 CKGNEGHARRLCLENGTWSSGLP 742
C+ G + + +S +
Sbjct: 249 CEEARGGPEQKLISEEDLNSAVD 271
Score = 137 bits (346), Expect = 3e-36
Identities = 61/409 (14%), Positives = 98/409 (23%), Gaps = 150/409 (36%)
Query: 280 CGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGV--APTCQYFQ 337
+ ++ + G+ Y C G +G+ C++G W + CQ
Sbjct: 13 PRRNTEILTGSWSDQ-TYPEGTQAIYKCRPGYRSLGNIIMVCRKGEWVALNPLRKCQ--- 68
Query: 338 LQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTL-ETTRTTHGAVAIYACH 396
CG GT TL +G A+Y C+
Sbjct: 69 --------------------------KRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCN 102
Query: 397 ENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPG 456
E Y L+GE D W P C C G + +S +
Sbjct: 103 EGYQLLGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHF----- 157
Query: 457 FILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVW 516
G V + C+ Y++ G C + W
Sbjct: 158 --------------------------------GQAVRFVCNSGYKIEGDEEMHCSDDGFW 185
Query: 517 SDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADS 576
S PKC EI C P + S +S
Sbjct: 186 SKEKPKCV------------------EISCKSPDVINGSPISQKI--------------- 212
Query: 577 ASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG 636
YK Y +C G
Sbjct: 213 -----IYKEN--------------------------------ERFQY--------KCNMG 227
Query: 637 YKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYY 685
Y+ + C ++G W +P C G + + + ++ ++
Sbjct: 228 YEYSERGDAVCTESG-WR-PLPSCEEARGGPEQKLISEEDLNSAVDHHH 274
Score = 135 bits (341), Expect = 1e-35
Identities = 64/382 (16%), Positives = 109/382 (28%), Gaps = 114/382 (29%)
Query: 461 GSNVNIDCGRLTAIPYGSI---SYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWS 517
+ DC L I S+ ++T G++ +Y C YR +G+ C + + +
Sbjct: 1 AAQPAEDCNELPPRRNTEILTGSWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCRKGEWVA 60
Query: 518 -DTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADS 576
+ KC+ + C P ++TG
Sbjct: 61 LNPLRKCQ------------------KRPCGHPGDTPFGTFTLTG--------------- 87
Query: 577 ASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG 636
GN YG A Y C G
Sbjct: 88 ------------------------GNVFEYG-----------VKAVYT--------CNEG 104
Query: 637 YKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTS----NATYYGTAVLYE 692
Y++ GE DT W+ +P C V C NG ++ ++G AV +
Sbjct: 105 YQLLGEINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFV 164
Query: 693 CDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKK 752
C+ Y++EG C ++G WS P C C + + K +
Sbjct: 165 CNSGYKIEGDEEMHCSDDGFWSKEKPKCV------EISCKSPDVINGSPISQKIIYKENE 218
Query: 753 SLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSI 812
C G Y + CT+ W +P+C+ +
Sbjct: 219 RFQ---YKCNMG---YEYSE----------RGDAVCTE-SGWRP-LPSCEEARGGPEQKL 260
Query: 813 DNGRVIIMNQTTTYNSAVEYHC 834
+ +N ++ +H
Sbjct: 261 ISEE--DLNSAVDHH----HHH 276
Score = 113 bits (284), Expect = 6e-28
Identities = 40/201 (19%), Positives = 61/201 (30%), Gaps = 37/201 (18%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGSAT-RTCKEGFWTG 328
+ + CG P TF T + G Y C EG L+G R C WT
Sbjct: 64 LRKCQKRPCGHPGDTPFGTFTLTGGNVFEYGVKAVYTCNEGYQLLGEINYRECDTDGWTN 123
Query: 329 VAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVT----LETTR 384
P C+ V C + E+G +
Sbjct: 124 DIPICEV-----------------------------VKCLPVTAPENGKIVSSAMEPDRE 154
Query: 385 TTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGR- 443
G + C+ Y + G+ C D G W+ +P+C+ C P I+G ++
Sbjct: 155 YHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVEISCKSPDVINGSPISQKIIY 214
Query: 444 RTGSVATYSCEPGFILFGSNV 464
+ Y C G+
Sbjct: 215 KENERFQYKCNMGYEYSERGD 235
Score = 113 bits (283), Expect = 8e-28
Identities = 39/220 (17%), Positives = 76/220 (34%), Gaps = 37/220 (16%)
Query: 654 SGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTW 713
+ +C + + G + + GT +Y+C YR G+ +C +
Sbjct: 2 AQPAEDCNELPPRRNTEILTG--SWSDQTYPEGTQAIYKCRPGYRSLGNIIMVCRKGEWV 59
Query: 714 SSG-LPTCKGNEGHARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRF 767
+ L C+ +R C GT++ T +C G
Sbjct: 60 ALNPLRKCQ------KRPCGHPGDTPFGTFT---LTGGNVFEYGVKAV---YTCNEG--- 104
Query: 768 YYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVII----MNQT 823
++L W+ IP C+ + C + +NG+++ ++
Sbjct: 105 ------YQLLG----EINYRECDTDGWTNDIPICEVVKCLPVTAPENGKIVSSAMEPDRE 154
Query: 824 TTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEK 863
+ AV + C Y+ G C +DG WS ++P+C +
Sbjct: 155 YHFGQAVRFVCNSGYKIEGDEEMHCSDDGFWSKEKPKCVE 194
Score = 77.3 bits (190), Expect = 1e-15
Identities = 26/179 (14%), Positives = 45/179 (25%), Gaps = 40/179 (22%)
Query: 272 ICQHNPANCGSPD-----RHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GF 325
IC+ C + V++ G + + C G + G C + GF
Sbjct: 127 ICE--VVKCLPVTAPENGKIVSSAMEPDREYHFGQAVRFVCNSGYKIEGDEEMHCSDDGF 184
Query: 326 WTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT 385
W+ P C + C + + +G+ +
Sbjct: 185 WSKEKPKCVE-----------------------------ISCKSPD-VINGSPISQKIIY 214
Query: 386 THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRR 444
Y C+ Y VC + G W P C ++ S
Sbjct: 215 KENERFQYKCNMGYEYSERGDAVCTESG-WR-PLPSCEEARGGPEQKLISEEDLNSAVD 271
>3iyp_F Complement decay-accelerating factor; virus, receptor, complex,
echovirus, DAF, icosahedral virus; HET: DAO; 7.20A {Homo
sapiens}
Length = 381
Score = 159 bits (402), Expect = 1e-42
Identities = 72/416 (17%), Positives = 116/416 (27%), Gaps = 103/416 (24%)
Query: 464 VNIDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRS--CLESKVWSDTA 520
V DCG +P + T++ + + Y C ++ + + S CL+ WSD
Sbjct: 32 VWQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIE 91
Query: 521 PKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILS---VTGNDRLYGRTLI------ 571
C C PT + L +T N G +
Sbjct: 92 EFCN-------------------RSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPG 132
Query: 572 -KTADSASSVATYKIGA---------------LPTLPAHSILSVTGNDRLYGRTLIKTAD 615
+ S S T P + + V G
Sbjct: 133 YRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGG------------- 179
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVP 672
GA + + C GYK+ G S C +GS WS +PEC + C P +
Sbjct: 180 -------ILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQID 232
Query: 673 NGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCL 732
NG + Y +V Y C++ + + G C N
Sbjct: 233 NGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNN--------------------- 271
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
+ G WS P C+G + K + + T + + T+T T
Sbjct: 272 DEGEWSGPPPECRGKSLT------SKVPPTVQKPTTVNVPTTEVSPTSQKTTTKTTTPNA 325
Query: 793 TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKC 848
+ P + H + + G TT + + G
Sbjct: 326 QATRSTPVSRTTKHFHETTPNKGSG------TTSGTTRLLSGHTCFTLTGLLGTLV 375
Score = 146 bits (369), Expect = 3e-38
Identities = 62/261 (23%), Positives = 94/261 (36%), Gaps = 36/261 (13%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLS--TCEDTGSWSGSVPECIYVDCGNPETVPN 673
+ ++ ++ Y+CE + C WS C C P + +
Sbjct: 48 ALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCN-RSCEVPTRLNS 106
Query: 674 GGFT---LTSNATYYGTAVLYECDENYRLEGH--ARRLCLENGTWSSGLPTCKGNEGHAR 728
+T N GT V YEC YR E + CL+N WS+ + CK +
Sbjct: 107 ASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCK------K 160
Query: 729 RLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTC 788
+ C G +G G +++ SC G ++L S + C
Sbjct: 161 KSCPNPGEIRNGQIDVPGGILFGATIS---FSCNTG---------YKLFG----STSSFC 204
Query: 789 TKRGT---WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYL 845
G+ WS +P C+ I C P IDNG + Y +V Y C + IG +
Sbjct: 205 LISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHS 264
Query: 846 RKCM---EDGSWSGDEPRCEK 863
C ++G WSG P C
Sbjct: 265 IYCTVNNDEGEWSGPPPECRG 285
Score = 144 bits (363), Expect = 2e-37
Identities = 70/384 (18%), Positives = 106/384 (27%), Gaps = 74/384 (19%)
Query: 366 DCGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIGETR--RVCGDGGKWNGTEPQC 422
DCG + + LE + V Y C E++ I + +C G +W+ E C
Sbjct: 35 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 94
Query: 423 LFDWCAEPPQISGGIVTTSGRRT-----GSVATYSCEPGFILFGSNVN------------ 465
C P +++ + G+V Y C PG+ S
Sbjct: 95 NRS-CEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWST 153
Query: 466 -------IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KV 515
C I G I + G+ + +SC+ Y+L G CL S
Sbjct: 154 AVEFCKKKSCPNPGEIRNGQIDVPGGILF-GATISFSCNTGYKLFGSTSSFCLISGSSVQ 212
Query: 516 WSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD 575
WSD P+C EI CP P + I+ + Y
Sbjct: 213 WSDPLPECR------------------EIYCPAPPQIDNGIIQGERDHYGYR-------- 246
Query: 576 SASSVATY--KIGALPTLPAHSILSVTGNDRLYGRTL----IKTADSASSVATYKIGALV 629
TY G +V ++ + K+ S K +
Sbjct: 247 ---QSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKSLTSKVPPTVQKPTTVN 303
Query: 630 KYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAV 689
E + T + S P + T G + T GT
Sbjct: 304 VPTTEVSPTSQKTTTKTTTPNAQATRSTPVSRTTKHFHETTPNKG------SGTTSGTTR 357
Query: 690 LYECDENYRLEGHARRLCLENGTW 713
L + L G L G
Sbjct: 358 LLSGHTCFTLTGLLGTLV-TMGLL 380
Score = 135 bits (340), Expect = 2e-34
Identities = 51/282 (18%), Positives = 80/282 (28%), Gaps = 64/282 (22%)
Query: 279 NCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGS--ATRTCKE-GFWTGVAPTC 333
+CG P N T + I+Y C E + + + C + W+ + C
Sbjct: 35 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 94
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTT---HGAV 390
C + ++ G V
Sbjct: 95 N------------------------------RSCEVPTRLNSASLKQPYITQNYFPVGTV 124
Query: 391 AIYACHENYTLIG--ETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT-GS 447
Y C Y + C KW+ C C P +I G + G G+
Sbjct: 125 VEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGA 184
Query: 448 VATYSCEPGFILFGSNV--------------------NIDCGRLTAIPYGSISYLNETTY 487
++SC G+ LFGS I C I G I +
Sbjct: 185 TISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYG 244
Query: 488 LGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEGK 526
V Y+C++ + ++G C + WS P+C GK
Sbjct: 245 YRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGK 286
Score = 127 bits (320), Expect = 7e-32
Identities = 48/226 (21%), Positives = 80/226 (35%), Gaps = 27/226 (11%)
Query: 647 CEDTGSWSGSVPECI---YVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGH 702
+ V C+ + DCG P VPN L ++ T + Y+C+E++
Sbjct: 15 LGELPRLLLLVLLCLPAVWQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPG 74
Query: 703 AR--RLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALS 760
+ +CL+ WS C + RL + + + +
Sbjct: 75 EKDSVICLKGSQWSDIEEFCNRSCEVPTRL--NSASLKQPY-ITQNYFPVGTVVE---YE 128
Query: 761 CLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIM 820
C PG Y +S TC + WS + CK C +PG I NG++ +
Sbjct: 129 CRPG---YRREP--------SLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP 177
Query: 821 NQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGS---WSGDEPRCEK 863
+ + + + C Y+ G C+ GS WS P C +
Sbjct: 178 G-GILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECRE 222
Score = 113 bits (284), Expect = 4e-27
Identities = 50/322 (15%), Positives = 87/322 (27%), Gaps = 89/322 (27%)
Query: 277 PANCGSPDRHVNTTFVGTVSTK----LGSTISYACPEGNMLVGSATRTC---KEGFWTGV 329
+C P R + + T+ +G+ + Y C G S + + W+
Sbjct: 95 NRSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTA 154
Query: 330 APTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGA 389
C+ C I +G + + GA
Sbjct: 155 VEFCKK-----------------------------KSCPNPGEIRNGQIDV-PGGILFGA 184
Query: 390 VAIYACHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT- 445
++C+ Y L G T C G +W+ P+C +C PPQI GI+
Sbjct: 185 TISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYG 244
Query: 446 -GSVATYSCEPGFILFGSNV--------------------NIDCGRLTAIPYGSISYLNE 484
TY+C GF + G + + +N
Sbjct: 245 YRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKSLTSKVPPTVQKPTTVNV 304
Query: 485 TTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREI 544
T EV + + ++ + + + P R
Sbjct: 305 PTT---EVSPTSQKTTT------KTTTPNAQATRSTPVS------------------RTT 337
Query: 545 RCPEPTLPAHSILSVTGNDRLY 566
+ T P + +G RL
Sbjct: 338 KHFHETTPNKGSGTTSGTTRLL 359
Score = 103 bits (259), Expect = 6e-24
Identities = 50/251 (19%), Positives = 74/251 (29%), Gaps = 52/251 (20%)
Query: 277 PANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAPT 332
+C +P N G+TIS++C G L GS + C W+ P
Sbjct: 160 KKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPE 219
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAI 392
C+ + C I++G + E +
Sbjct: 220 CR-----------------------------EIYCPAPPQIDNGIIQGERDHYGYRQSVT 250
Query: 393 YACHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRTGSV- 448
YAC++ +T+IGE C D G+W+G P+C + TT T V
Sbjct: 251 YACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRGKSLTSKVPPTVQKPTTVNVPTTEVS 310
Query: 449 ------ATYSCEPGFILFGSN---VNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRN 499
T + P S T GS T G+ L S
Sbjct: 311 PTSQKTTTKTTTPNAQATRSTPVSRTTKHFHETTPNKGSG------TTSGTTRLLSGHTC 364
Query: 500 YRLVGHPRRSC 510
+ L G
Sbjct: 365 FTLTGLLGTLV 375
Score = 76.2 bits (187), Expect = 8e-15
Identities = 31/198 (15%), Positives = 53/198 (26%), Gaps = 49/198 (24%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTC----KEGFW 326
C+ C +P + N G +++YAC +G ++G + C EG W
Sbjct: 219 ECR--EIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 276
Query: 327 TGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTT 386
+G P C ++ ++ T
Sbjct: 277 SGPPPEC---------------------------RGKSLTSKVPPTVQKPTT-------- 301
Query: 387 HGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRTG 446
V + + T T + + + P + G TTS G
Sbjct: 302 ---VNVPTTEVSPTSQKTTTKTTTPNAQATRSTPVSRTTKHFHETTPNKGSGTTS----G 354
Query: 447 SVATYSCEPGFILFGSNV 464
+ S F L G
Sbjct: 355 TTRLLSGHTCFTLTGLLG 372
Score = 54.7 bits (131), Expect = 6e-08
Identities = 14/86 (16%), Positives = 29/86 (33%), Gaps = 6/86 (6%)
Query: 785 TRTCTKRGTWSGHIPTCKAI---DCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQR 840
+ + C DC P + N + + +T+ ++ + Y C + +
Sbjct: 12 LPLLGELPRLLLLVLLCLPAVWQDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVK 71
Query: 841 IG--PYLRKCMEDGSWSGDEPRCEKR 864
I C++ WS E C +
Sbjct: 72 IPGEKDSVICLKGSQWSDIEEFCNRS 97
Score = 35.0 bits (80), Expect = 0.092
Identities = 7/56 (12%), Positives = 13/56 (23%), Gaps = 7/56 (12%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKEGFWT 327
+ + + + T G+T + L G G T
Sbjct: 333 VSRTTKHFHETTPNKGSGT-------TSGTTRLLSGHTCFTLTGLLGTLVTMGLLT 381
>1ok3_A CD55, CR, DAF, complement decay-accelerating factor; regulator of
complement pathway, regulator of complement; 2.2A {Homo
sapiens} SCOP: g.18.1.1 g.18.1.1 g.18.1.1 g.18.1.1 PDB:
1ojw_A 1ojy_A 1ok1_A 1ok2_A 1ojv_A 1ok9_A 1m11_R 1nwv_A
2qzh_A 2qzf_A
Length = 254
Score = 153 bits (388), Expect = 4e-42
Identities = 62/260 (23%), Positives = 94/260 (36%), Gaps = 36/260 (13%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLS--TCEDTGSWSGSVPECIYVDCGNPETVPN 673
+ ++ ++ Y+CE + C WS C C P + +
Sbjct: 16 ALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFCN-RSCEVPTRLNS 74
Query: 674 GGFT---LTSNATYYGTAVLYECDENYRLEGH--ARRLCLENGTWSSGLPTCKGNEGHAR 728
+T N GT V YEC YR E + CL+N WS+ + CK +
Sbjct: 75 ASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCK------K 128
Query: 729 RLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTC 788
+ C G +G G +++ SC G ++L S + C
Sbjct: 129 KSCPNPGEIRNGQIDVPGGILFGATIS---FSCNTG---------YKLFG----STSSFC 172
Query: 789 TKRGT---WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYL 845
G+ WS +P C+ I C P IDNG + Y +V Y C + IG +
Sbjct: 173 LISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHS 232
Query: 846 RKCM---EDGSWSGDEPRCE 862
C ++G WSG P C
Sbjct: 233 IYCTVNNDEGEWSGPPPECR 252
Score = 143 bits (362), Expect = 1e-38
Identities = 50/281 (17%), Positives = 79/281 (28%), Gaps = 64/281 (22%)
Query: 279 NCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGS--ATRTCKE-GFWTGVAPTC 333
+CG P N T + I+Y C E + + + C + W+ + C
Sbjct: 3 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 62
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTT---HGAV 390
C + ++ G V
Sbjct: 63 N------------------------------RSCEVPTRLNSASLKQPYITQNYFPVGTV 92
Query: 391 AIYACHENYTLIG--ETRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT-GS 447
Y C Y + C KW+ C C P +I G + G G+
Sbjct: 93 VEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGGILFGA 152
Query: 448 VATYSCEPGFILFGSNV--------------------NIDCGRLTAIPYGSISYLNETTY 487
++SC G+ LFGS I C I G I +
Sbjct: 153 TISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYG 212
Query: 488 LGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEG 525
V Y+C++ + ++G C + WS P+C G
Sbjct: 213 YRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 253
Score = 129 bits (325), Expect = 1e-33
Identities = 59/291 (20%), Positives = 91/291 (31%), Gaps = 73/291 (25%)
Query: 466 IDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRS--CLESKVWSDTAPK 522
DCG +P + T++ + + Y C ++ + + S CL+ WSD
Sbjct: 2 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEF 61
Query: 523 CEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILS---VTGNDRLYGRTLI-------K 572
C C PT + L +T N G + +
Sbjct: 62 CN-------------------RSCEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYR 102
Query: 573 TADSASSVATYKIGA---------------LPTLPAHSILSVTGNDRLYGRTLIKTADSA 617
S S T P + + V G
Sbjct: 103 REPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPGG--------------- 147
Query: 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNG 674
GA + + C GYK+ G S C +GS WS +PEC + C P + NG
Sbjct: 148 -----ILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNG 202
Query: 675 GFTLTSNATYYGTAVLYECDENYRLEGHARRLCL---ENGTWSSGLPTCKG 722
+ Y +V Y C++ + + G C + G WS P C+G
Sbjct: 203 IIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 253
Score = 129 bits (325), Expect = 1e-33
Identities = 46/206 (22%), Positives = 75/206 (36%), Gaps = 24/206 (11%)
Query: 664 DCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHAR--RLCLENGTWSSGLPTC 720
DCG P VPN L ++ T + Y+C+E++ + +CL+ WS C
Sbjct: 3 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 62
Query: 721 KGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQ 780
+ R L + + + + C PG Y
Sbjct: 63 NRSCEVPTR--LNSASLKQPY-ITQNYFPVGTVVE---YECRPG---YRREP-------- 105
Query: 781 KVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQR 840
+S TC + WS + CK C +PG I NG++ + + + + + C Y+
Sbjct: 106 SLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVPG-GILFGATISFSCNTGYKL 164
Query: 841 IGPYLRKCMEDGS---WSGDEPRCEK 863
G C+ GS WS P C +
Sbjct: 165 FGSTSSFCLISGSSVQWSDPLPECRE 190
Score = 121 bits (306), Expect = 4e-31
Identities = 49/232 (21%), Positives = 74/232 (31%), Gaps = 50/232 (21%)
Query: 366 DCGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIGETR--RVCGDGGKWNGTEPQC 422
DCG + + LE + V Y C E++ I + +C G +W+ E C
Sbjct: 3 DCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEFC 62
Query: 423 LFDWCAEPPQISGGIVTTSGRRT-----GSVATYSCEPGFILFGSNVN------------ 465
C P +++ + G+V Y C PG+ S
Sbjct: 63 NRS-CEVPTRLNSASLKQPYITQNYFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWST 121
Query: 466 -------IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KV 515
C I G I + G+ + +SC+ Y+L G CL S
Sbjct: 122 AVEFCKKKSCPNPGEIRNGQIDVPGGILF-GATISFSCNTGYKLFGSTSSFCLISGSSVQ 180
Query: 516 WSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYG 567
WSD P+C EI CP P + I+ + Y
Sbjct: 181 WSDPLPECR------------------EIYCPAPPQIDNGIIQGERDHYGYR 214
Score = 108 bits (272), Expect = 1e-26
Identities = 46/195 (23%), Positives = 70/195 (35%), Gaps = 40/195 (20%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLS--TCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT 679
+ +G +V+Y C GY+ E TC WS +V C C NP + NG +
Sbjct: 86 YFPVGTVVEYECRPGYRREPSLSPKLTCLQNLKWSTAVEFCKKKSCPNPGEIRNGQIDVP 145
Query: 680 SNATYYGTAVLYECDENYRLEGHARRLCLENGT---WSSGLPTCKGNEGHARRLC----- 731
+G + + C+ Y+L G CL +G+ WS LP C+ C
Sbjct: 146 -GGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR------EIYCPAPPQ 198
Query: 732 LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCT-- 789
++NG G + +C G + G ++ CT
Sbjct: 199 IDNGIIQ-------GERDHYGYRQSVTYACNKG---FTMIG----------EHSIYCTVN 238
Query: 790 -KRGTWSGHIPTCKA 803
G WSG P C+
Sbjct: 239 NDEGEWSGPPPECRG 253
Score = 86.1 bits (213), Expect = 8e-19
Identities = 35/158 (22%), Positives = 56/158 (35%), Gaps = 38/158 (24%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWT 327
C+ +C +P N G+TIS++C G L GS + C W+
Sbjct: 125 FCK--KKSCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWS 182
Query: 328 GVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTH 387
P C+ + C I++G + E +
Sbjct: 183 DPLPECR-----------------------------EIYCPAPPQIDNGIIQGERDHYGY 213
Query: 388 GAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQC 422
YAC++ +T+IGE C D G+W+G P+C
Sbjct: 214 RQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPEC 251
Score = 55.7 bits (134), Expect = 1e-08
Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 804 IDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIG--PYLRKCMEDGSWSGDEPR 860
DC P + N + + +T+ ++ + Y C + +I C++ WS E
Sbjct: 2 QDCGLPPDVPNAQPALEGRTSFPEDTVITYKCEESFVKIPGEKDSVICLKGSQWSDIEEF 61
Query: 861 CEKR 864
C +
Sbjct: 62 CNRS 65
Score = 46.1 bits (109), Expect = 2e-05
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTC----KEGFW 326
C+ C +P + N G +++YAC +G ++G + C EG W
Sbjct: 187 ECR--EIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 244
Query: 327 TGVAPTCQ 334
+G P C+
Sbjct: 245 SGPPPECR 252
>1rid_A Complement control protein; regulation, SCR, immune system; HET:
IDS SGN; 2.10A {Vaccinia virus} SCOP: g.18.1.1 g.18.1.1
g.18.1.1 g.18.1.1 PDB: 1g44_A 1g40_A* 1y8e_A* 1e5g_A
1vvc_A 1vvd_A 1vve_A
Length = 244
Score = 152 bits (385), Expect = 8e-42
Identities = 56/262 (21%), Positives = 97/262 (37%), Gaps = 39/262 (14%)
Query: 611 IKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPET 670
K + + A Y IG ++Y C GY+ + + TG+ +CI C +P
Sbjct: 13 FKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRD 72
Query: 671 VPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT----WSSGLPTCKGNEGH 726
+ NG + +G+++ Y C+ Y L G ++ C T W+ P C+
Sbjct: 73 IDNGQLDIGG--VDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICE----- 125
Query: 727 ARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQK 781
C + NG + G + + SC G + L
Sbjct: 126 -SVKCQSPPSISNGRHN-------GYEDFYTDGSVVTYSCNSG---------YSLIG--- 165
Query: 782 VSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI 841
+ C+ G WS PTC+ + C HP + ++ +YN V++ C Y+
Sbjct: 166 -NSGVLCS-GGEWSD-PPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLS 222
Query: 842 GPYLRKCMEDGSWSGDEPRCEK 863
G C +W + P+C +
Sbjct: 223 GSSSSTCSPGNTWKPELPKCVR 244
Score = 141 bits (358), Expect = 4e-38
Identities = 62/273 (22%), Positives = 83/273 (30%), Gaps = 59/273 (21%)
Query: 280 CGSPDRHVNTTFVGTVST------KLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPT 332
C P R +N F +V T +G TI Y C G K G +
Sbjct: 2 CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 61
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAI 392
C C I++G + + G+
Sbjct: 62 CI-----------------------------KRRCPSPRDIDNGQLDIGGV--DFGSSIT 90
Query: 393 YACHENYTLIGETRRVCGDGG----KWNGTEPQCLFDWCAEPPQISGGIVTTSGRRT--G 446
Y+C+ Y LIGE++ C G WN P C C PP IS G G
Sbjct: 91 YSCNSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDG 150
Query: 447 SVATYSCEPGFILFGSNV---------------NIDCGRLTAIPYGSISYLNETTYLGSE 491
SV TYSC G+ L G++ + C T S +
Sbjct: 151 SVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDN 210
Query: 492 VLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCE 524
V + C Y+L G +C W PKC
Sbjct: 211 VDFKCKYGYKLSGSSSSTCSPGNTWKPELPKCV 243
Score = 128 bits (324), Expect = 1e-33
Identities = 46/224 (20%), Positives = 65/224 (29%), Gaps = 41/224 (18%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLF 424
++ T G Y C Y G QC+
Sbjct: 5 PSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIK 64
Query: 425 DWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNV-------------------- 464
C P I G + G GS TYSC G+ L G +
Sbjct: 65 RRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPEAPIC 124
Query: 465 -NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKC 523
++ C +I G + + GS V YSC+ Y L+G+ C WSD P C
Sbjct: 125 ESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLC-SGGEWSDP-PTC 182
Query: 524 EGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYG 567
+ ++CP PT+ + S Y
Sbjct: 183 Q------------------IVKCPHPTISNGYLSSGFKRSYSYN 208
Score = 123 bits (309), Expect = 1e-31
Identities = 53/272 (19%), Positives = 75/272 (27%), Gaps = 51/272 (18%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEG 525
+ N +G + Y C YR + +C
Sbjct: 5 PSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCI- 63
Query: 526 KATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK- 584
+ RCP P + + +G S TY
Sbjct: 64 -----------------KRRCPSPRDIDNG--QLDIGGVDFG-----------SSITYSC 93
Query: 585 -IGALPTLPAHSI--LSVTGNDRLYGRT------------LIKTADSASSVATYKIGALV 629
G + S L TG+ I Y G++V
Sbjct: 94 NSGYHLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVV 153
Query: 630 KYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATY-YGTA 688
Y C GY + G C G WS P C V C +P + NG + +Y Y
Sbjct: 154 TYSCNSGYSLIGNSGVLCSG-GEWSDP-PTCQIVKCPHPT-ISNGYLSSGFKRSYSYNDN 210
Query: 689 VLYECDENYRLEGHARRLCLENGTWSSGLPTC 720
V ++C Y+L G + C TW LP C
Sbjct: 211 VDFKCKYGYKLSGSSSSTCSPGNTWKPELPKC 242
Score = 116 bits (292), Expect = 2e-29
Identities = 48/209 (22%), Positives = 62/209 (29%), Gaps = 31/209 (14%)
Query: 660 CIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPT 719
C N T + G + Y C YR + GT +
Sbjct: 2 CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 61
Query: 720 CKGNEGHARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIF 774
C +R C ++NG G S+T SC G +
Sbjct: 62 CI------KRRCPSPRDIDNGQLDI------GGVDFGSSIT---YSCNSG---------Y 97
Query: 775 RLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHC 834
L K T W+ P C+++ C P SI NGR T S V Y C
Sbjct: 98 HLIGESKSYCELGSTGSMVWNPEAPICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSC 157
Query: 835 VPQYQRIGPYLRKCMEDGSWSGDEPRCEK 863
Y IG C G WS P C+
Sbjct: 158 NSGYSLIGNSGVLC-SGGEWSD-PPTCQI 184
Score = 82.6 bits (204), Expect = 9e-18
Identities = 32/153 (20%), Positives = 47/153 (30%), Gaps = 33/153 (21%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTCKEGFWTGVA 330
IC+ C SP N G GS ++Y+C G L+G++ C G W+
Sbjct: 123 ICE--SVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSD-P 179
Query: 331 PTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAV 390
PTCQ V C + ++
Sbjct: 180 PTCQI-----------------------------VKCPHPTISNGYLSSGFKRSYSYNDN 210
Query: 391 AIYACHENYTLIGETRRVCGDGGKWNGTEPQCL 423
+ C Y L G + C G W P+C+
Sbjct: 211 VDFKCKYGYKLSGSSSSTCSPGNTWKPELPKCV 243
Score = 57.6 bits (139), Expect = 3e-09
Identities = 12/64 (18%), Positives = 18/64 (28%)
Query: 801 CKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPR 860
C N N +EY C+P Y++ G+ +
Sbjct: 2 CTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQ 61
Query: 861 CEKR 864
C KR
Sbjct: 62 CIKR 65
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain,
complement SYST convertase, complement alternate
pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I*
3hs0_D* 2ok5_A* 2xwb_F*
Length = 741
Score = 144 bits (363), Expect = 1e-35
Identities = 57/263 (21%), Positives = 75/263 (28%), Gaps = 38/263 (14%)
Query: 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSG---------SVPECIYVDCGNP 668
S + G ++Y C G+ TC TGSWS EC + C P
Sbjct: 22 GSFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGSWSTLKTQDQKTVRKAECRAIHCPRP 81
Query: 669 ETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHAR 728
NG + S + + C + Y L G A R C NG WS C G+
Sbjct: 82 HDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGY-- 139
Query: 729 RLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTC 788
C G + C G RG S RTC
Sbjct: 140 --CSNPGIPIGTRKVGSQYRLEDSV----TYHCSRG---LTLRG----------SQRRTC 180
Query: 789 TKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI------- 841
+ G+WSG P+C+ + T E P Q+
Sbjct: 181 QEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGVDAEDGHGPGEQQKRKIVLDP 240
Query: 842 -GPYLRKCMEDGSWSGDEPRCEK 863
G + DGS S
Sbjct: 241 SGSMNIYLVLDGSGSIGASDFTG 263
Score = 136 bits (343), Expect = 3e-33
Identities = 58/367 (15%), Positives = 92/367 (25%), Gaps = 125/367 (34%)
Query: 415 WNGTEPQCLFDWCAEP-PQISGGIVTTSGRRTGSVATYSCEPGFILFGSNV--------- 464
W+ PQ C+ +I GG + G Y C GF +
Sbjct: 3 WSLARPQGS---CSLEGVEIKGGSFRLL--QEGQALEYVCPSGFYPYPVQTRTCRSTGSW 57
Query: 465 -----------------NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPR 507
I C R G + + E+ + C Y L G
Sbjct: 58 STLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEISFHCYDGYTLRGSAN 117
Query: 508 RSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYG 567
R+C + WS +C N A C
Sbjct: 118 RTCQVNGRWSGQTA-----------ICDNGAGY-----CSN------------------- 142
Query: 568 RTLIKTADSASSVATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGA 627
P +P + G+ Y++
Sbjct: 143 ---------------------PGIPIGTR--KVGSQ-------------------YRLED 160
Query: 628 LVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGT 687
V Y C RG + G TC++ GSWSG+ P C + F + T G
Sbjct: 161 SVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGV 220
Query: 688 AVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGC 747
+ + + + +G+ + + +G+ S G G
Sbjct: 221 DAEDGHGPGEQQKR--KIVLDPSGSMN--------------IYLVLDGSGSIGASDFTGA 264
Query: 748 KTPKKSL 754
K +L
Sbjct: 265 KKCLVNL 271
Score = 129 bits (326), Expect = 4e-31
Identities = 46/282 (16%), Positives = 70/282 (24%), Gaps = 50/282 (17%)
Query: 271 WICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGV 329
W +C + + G + Y CP G TRTC+ G W+ +
Sbjct: 3 WSLARPQGSCSLEGVEIKGGSFRLLQE--GQALEYVCPSGFYPYPVQTRTCRSTGSWSTL 60
Query: 330 APTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGA 389
Q + E + C + E+G +
Sbjct: 61 KTQDQKTVRKA--------------------ECRAIHCPRPHDFENGEYWPRSPYYNVSD 100
Query: 390 VAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL--FDWCAEPPQISGGIVTTSGRRTGS 447
+ C++ YTL G R C G+W+G C +C+ P G S R
Sbjct: 101 EISFHCYDGYTLRGSANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKVGSQYRLED 160
Query: 448 VATYSCEPGFILFGSNV-----------------NIDCGRLTAIPYGSISYLNETTYLGS 490
TY C G L GS + + T G
Sbjct: 161 SVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSLTETIEGV 220
Query: 491 EVLYSCSRNYRL--------VGHPRRSCLESKVWSDTAPKCE 524
+ + G + S A
Sbjct: 221 DAEDGHGPGEQQKRKIVLDPSGSMNIYLVLDGSGSIGASDFT 262
Score = 124 bits (312), Expect = 2e-29
Identities = 57/234 (24%), Positives = 75/234 (32%), Gaps = 28/234 (11%)
Query: 653 WSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT 712
WS + P+ C GG + G A+ Y C + R C G+
Sbjct: 3 WSLARPQG---SCSLEGVEIKGG---SFRLLQEGQALEYVCPSGFYPYPVQTRTCRSTGS 56
Query: 713 WSSGLPTCKGNEGHA---RRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYY 769
WS+ + A C + +G + C G Y
Sbjct: 57 WSTLKTQDQKTVRKAECRAIHCPRPHDFENGEYWPRSPYYNVSDEIS--FHCYDG---YT 111
Query: 770 HRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCK--AIDCSHPGSIDNGRVIIMNQTTTYN 827
RG S RTC G WSG C A CS+PG R +
Sbjct: 112 LRG----------SANRTCQVNGRWSGQTAICDNGAGYCSNPGIPIGTRKV--GSQYRLE 159
Query: 828 SAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIPGRSRRSPINSF 881
+V YHC G R C E GSWSG EP C+ F P + ++S
Sbjct: 160 DSVTYHCSRGLTLRGSQRRTCQEGGSWSGTEPSCQDSFMYDTPQEVAEAFLSSL 213
>3erb_A Complement C2; C3/C5 convertase, short consensus repeat(SCR), sushi
domain, human complement system, complement second
component C2; 1.80A {Homo sapiens}
Length = 223
Score = 124 bits (312), Expect = 3e-32
Identities = 45/229 (19%), Positives = 69/229 (30%), Gaps = 34/229 (14%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSG-------SVPECIYVDCGNPETVPNG 674
+ G+L+ Y C +G C+ +G W S C V C P + NG
Sbjct: 20 GWAPGSLLTYSCPQGLYPSPAS-RLCKSSGQWQTPGATRSLSKAVCKPVRCPAPVSFENG 78
Query: 675 GFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLEN 734
+T + G V +EC++ + L G R C NG W C GH +
Sbjct: 79 IYTPRLGSYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISL 138
Query: 735 GTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTW 794
G +G + C G S R C G W
Sbjct: 139 GAVRTGFRF-----GHGDKVR---YRCSSN---LVLTG----------SSERECQGNGVW 177
Query: 795 SGHIPTCKAIDCSH-PGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIG 842
SG P C+ P + + + + + + +G
Sbjct: 178 SGTEPICRQPYSYDFPEDVAPA--LGTSFSHMLGATNPTQK--TKESLG 222
Score = 120 bits (302), Expect = 5e-31
Identities = 52/293 (17%), Positives = 70/293 (23%), Gaps = 86/293 (29%)
Query: 279 NCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQYFQL 338
+C TF + GS ++Y+CP+G ++ G W T +
Sbjct: 3 SCPQNVNISGGTFTLSHGWAPGSLLTYSCPQGLYPSPASRLCKSSGQWQTPGATRSLSKA 62
Query: 339 QPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHEN 398
V C E+G T G + C +
Sbjct: 63 VCKPVR----------------------CPAPVSFENGIYTPRLGSYPVGGNVSFECEDG 100
Query: 399 YTLIGETRRVCGDGGKWNGTEPQC--LFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPG 456
+ L G R C G W+G C C P G + T G Y C
Sbjct: 101 FILRGSPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGAVRTGFRFGHGDKVRYRCSSN 160
Query: 457 FILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVW 516
L G R C + VW
Sbjct: 161 -------------------------------------------LVLTGSSERECQGNGVW 177
Query: 517 SDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRT 569
S T P C + D PE PA T + G T
Sbjct: 178 SGTEPICRQPYSYD---------------FPEDVAPALG----TSFSHMLGAT 211
Score = 115 bits (288), Expect = 4e-29
Identities = 50/227 (22%), Positives = 72/227 (31%), Gaps = 32/227 (14%)
Query: 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKG 722
C + G FTL S+ G+ + Y C + A RLC +G W + T
Sbjct: 2 PSCPQNVNISGGTFTL-SHGWAPGSLLTYSCPQGLYPSP-ASRLCKSSGQWQTPGATRSL 59
Query: 723 NEGH-ARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRL 776
++ C ENG ++ + C G + RG
Sbjct: 60 SKAVCKPVRCPAPVSFENGIYT-------PRLGSYPVGGNVSFECEDG---FILRG---- 105
Query: 777 QNTQKVSYTRTCTKRGTWSGHIPTCKAI--DCSHPGSIDNGRVIIMNQTTTYNSAVEYHC 834
S R C G W G C C +PG + + V Y C
Sbjct: 106 ------SPVRQCRPNGMWDGETAVCDNGAGHCPNPGISLGA--VRTGFRFGHGDKVRYRC 157
Query: 835 VPQYQRIGPYLRKCMEDGSWSGDEPRCEKRFNSGIPGRSRRSPINSF 881
G R+C +G WSG EP C + ++ P + SF
Sbjct: 158 SSNLVLTGSSERECQGNGVWSGTEPICRQPYSYDFPEDVAPALGTSF 204
Score = 108 bits (272), Expect = 6e-27
Identities = 51/258 (19%), Positives = 72/258 (27%), Gaps = 76/258 (29%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEG 525
C + I G+ + + GS + YSC + R C S G
Sbjct: 2 PSCPQNVNISGGTFTLSHGWAP-GSLLTYSCPQGLYPSP-ASRLCKSS-----------G 48
Query: 526 KATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKI 585
+ S + +RCP
Sbjct: 49 QWQTPGATRSLSKAVCKPVRCPA------------------------------------- 71
Query: 586 GALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLS 645
P + I + +Y +G V + CE G+ + G P+
Sbjct: 72 ---PVSFENGIYTPRLG-------------------SYPVGGNVSFECEDGFILRGSPVR 109
Query: 646 TCEDTGSWSGSVPEC--IYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHA 703
C G W G C C NP + G T +G V Y C N L G +
Sbjct: 110 QCRPNGMWDGETAVCDNGAGHCPNPG-ISLGAVR-TGFRFGHGDKVRYRCSSNLVLTGSS 167
Query: 704 RRLCLENGTWSSGLPTCK 721
R C NG WS P C+
Sbjct: 168 ERECQGNGVWSGTEPICR 185
Score = 91.5 bits (227), Expect = 5e-21
Identities = 34/203 (16%), Positives = 58/203 (28%), Gaps = 54/203 (26%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLF 424
C + +I GT TL G++ Y+C + +R +C G+W
Sbjct: 2 PSCPQNVNISGGTFTLSHG-WAPGSLLTYSCPQGLYPSPASR-LCKSSGQWQTPGA---- 55
Query: 425 DWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNE 484
C+P + C + G +
Sbjct: 56 TRSLSKAV--------------------CKP----------VRCPAPVSFENGIYTPRLG 85
Query: 485 TTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVDRREI 544
+ +G V + C + L G P R C + +W C+ A
Sbjct: 86 SYPVGGNVSFECEDGFILRGSPVRQCRPNGMWDGETAVCDNGAGH--------------- 130
Query: 545 RCPEPTLPAHSILSVTGNDRLYG 567
CP P + ++ TG +G
Sbjct: 131 -CPNPGISLGAV--RTGFRFGHG 150
Score = 49.5 bits (118), Expect = 1e-06
Identities = 12/60 (20%), Positives = 16/60 (26%), Gaps = 2/60 (3%)
Query: 803 AIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRCE 862
A C +I G + + S + Y C P R C G W
Sbjct: 1 APSCPQNVNISGGTFTLSH-GWAPGSLLTYSCPQGL-YPSPASRLCKSSGQWQTPGATRS 58
>2j22_A Fucolectin-related protein; carbohydrate-binding protein,
carbohydrate binding protein; 1.8A {Streptococcus
pneumoniae}
Length = 148
Score = 110 bits (275), Expect = 3e-28
Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 36/172 (20%)
Query: 18 SGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPI 77
+N+AL + T QSST S A DG + T T+++ WW++DL + +
Sbjct: 11 KLSNIALTKETRQSSTDYNGFSRLAVDGNKNGDYGHHSVTHTKEDSPSWWEIDLAQTEEL 70
Query: 78 RIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDL 137
+ I R Q L + +I + +S D
Sbjct: 71 EKLIIYNRTDAEIQRLSNFDIIIYDSND-------------------------------- 98
Query: 138 QKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFT 189
E S L G+ V I L LSL EVE++T
Sbjct: 99 ---YEVFTQHIDSLESNNLSIDLK-GLKGKKVRISLRSAGIPLSLAEVEVYT 146
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding
protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP:
b.18.1.15
Length = 158
Score = 110 bits (275), Expect = 4e-28
Identities = 52/178 (29%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 18 SGTNVALRRPTNQSSTIRGA-----PSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLL 72
+ NVA+R QS+ +RG +SNA DG + CT + + +PWW+VDLL
Sbjct: 7 TQENVAVRGKATQSAQLRGEHAANSEASNAIDGNRDSNFYHGSCTHSSGQANPWWRVDLL 66
Query: 73 RPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVG 132
+ Y I V IT RG C + + EI +G
Sbjct: 67 QVYTITSVTITNRGDCCGERISGAEINIGQH----------------------------- 97
Query: 133 NSTDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFTT 190
+++ NP C+ G++ G TK+F C ++G+ V L SL LCEVE+
Sbjct: 98 LASNGVNNPECSVI-GSMATGETKTFHCPAPMIGRYVVTYLPT-SESLHLCEVEVNVD 153
>3sw0_X H factor 1, complement factor H; innate immune response, sushi
domains, cofactor in the inact of C3B, C3B, human
plasma, immune system; 1.80A {Homo sapiens}
Length = 188
Score = 110 bits (276), Expect = 8e-28
Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 24/186 (12%)
Query: 365 VDCGKLEHIEHGTVT-LETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL 423
C +++ + + ++ G Y C Y + G+ +C +G + +
Sbjct: 3 TSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKDS 62
Query: 424 FDWCAEPPQISGGIVTTSGRRT---GSVATYSCEPGFILFGSNV---------------N 465
C PP I G +T+ S Y C+ + L G+ +
Sbjct: 63 TGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNGQWSEPPKCLH 122
Query: 466 IDCGRLTAIPYGSISYLNETTY-----LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTA 520
+ +I+ G V + C R YRL
Sbjct: 123 PCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEY 182
Query: 521 PKCEGK 526
P C +
Sbjct: 183 PTCAKR 188
Score = 104 bits (261), Expect = 7e-26
Identities = 38/190 (20%), Positives = 58/190 (30%), Gaps = 25/190 (13%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGG 675
+ ++ Y G V+Y+C Y++ G+ C + + CG P + NG
Sbjct: 17 VSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKDSTGKCGPPPPIDNGD 76
Query: 676 FTLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLEN 734
T + Y ++V Y+C Y+LEG+ R C NG W S P C +
Sbjct: 77 ITSFPLSVYAPASSVEYQCQNLYQLEGNKRITC-RNGQW-SEPPKCL------HPCVISR 128
Query: 735 GTWSSGLPTCKGCKTPKKSLTRPAL---SCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKR 791
+ + K C G Y T
Sbjct: 129 EIMENYNIALRWTAKQKLYSRTGESVEFVCKRG---YRLSS----------RSHTLRTTC 175
Query: 792 GTWSGHIPTC 801
PTC
Sbjct: 176 WDGKLEYPTC 185
Score = 101 bits (254), Expect = 6e-25
Identities = 41/208 (19%), Positives = 62/208 (29%), Gaps = 28/208 (13%)
Query: 663 VDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCK 721
C NP TV N + Y G V Y+C Y + G +CL NG W+
Sbjct: 3 TSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTEPPQCKD 61
Query: 722 GNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQK 781
++NG +S P S+ C ++L+
Sbjct: 62 STGKCGPPPPIDNGDITSF---PLSVYAPASSVE---YQCQNL---------YQLEG--- 103
Query: 782 VSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-----TYNSAVEYHCVP 836
+ TC G WS P C ++N + + +VE+ C
Sbjct: 104 -NKRITCRN-GQWSE-PPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKR 160
Query: 837 QYQRIGPYLRKCMEDGSWSGDEPRCEKR 864
Y+ + P C KR
Sbjct: 161 GYRLSSRSHTLRTTCWDGKLEYPTCAKR 188
Score = 73.4 bits (180), Expect = 4e-15
Identities = 30/214 (14%), Positives = 49/214 (22%), Gaps = 48/214 (22%)
Query: 466 IDCGRLTAIPYGSISYLNETTY-LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCE 524
C + I + Y G V Y C Y + G CL K
Sbjct: 3 TSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCLNGNWTEPPQCKD- 61
Query: 525 GKATKDIKVCSNVAVDRREIRCPEPTLPAH-SILSVTGNDRLYGRTLIKTADSASSVATY 583
+C P + I S + S Y
Sbjct: 62 -----------------STGKCGPPPPIDNGDITSFPLSVYAPA-----------SSVEY 93
Query: 584 K-------IGALPTL---------PAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGA 627
+ G + P + + + I +A + G
Sbjct: 94 QCQNLYQLEGN-KRITCRNGQWSEPPKCLHPCVISREIMENYNIALRWTAKQKLYSRTGE 152
Query: 628 LVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECI 661
V++ C+RGY++ + P C
Sbjct: 153 SVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTCA 186
Score = 71.1 bits (174), Expect = 3e-14
Identities = 27/157 (17%), Positives = 42/157 (26%), Gaps = 37/157 (23%)
Query: 273 CQHNPANCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVGSATRTCKEGFWTGVA 330
C+ + CG P N + S++ Y C L G+ TC+ G W+
Sbjct: 59 CKDSTGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNGQWSEP- 117
Query: 331 PTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRT----- 385
P C L+ E +E+ + L T
Sbjct: 118 PKC-----------------------------LHPCVISREIMENYNIALRWTAKQKLYS 148
Query: 386 THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQC 422
G + C Y L + + P C
Sbjct: 149 RTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC 185
Score = 53.8 bits (129), Expect = 2e-08
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 2/70 (2%)
Query: 803 AIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPRC 861
C +P ++ N ++ + V Y C Y+ G C+ +G+W+
Sbjct: 2 GTSCVNPPTVQNAYIVSRQMSKYPSGERVRYQCRSPYEMFGDEEVMCL-NGNWTEPPQCK 60
Query: 862 EKRFNSGIPG 871
+ G P
Sbjct: 61 DSTGKCGPPP 70
Score = 38.0 bits (88), Expect = 0.006
Identities = 9/63 (14%), Positives = 20/63 (31%), Gaps = 1/63 (1%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVA 330
C + + + + T + ++ G ++ + C G L +
Sbjct: 123 PCVISREIMENYNIALRWTAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEY 182
Query: 331 PTC 333
PTC
Sbjct: 183 PTC 185
>1h03_P Complement decay-accelerating factor; immune system protein,
enteroviral receptor, bacterial receptor, ligand for
CD97, complement pathway; 1.7A {Homo sapiens} SCOP:
g.18.1.1 g.18.1.1 PDB: 1h2q_P 1uot_P 1upn_E 1h2p_P
1h04_P 2qzd_A
Length = 125
Score = 106 bits (265), Expect = 4e-27
Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 623 YKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTLT 679
GA + + C GYK+ G S C +GS WS +PEC + C P + NG
Sbjct: 20 ILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGE 79
Query: 680 SNATYYGTAVLYECDENYRLEGHARRLCLEN---GTWSSGLPTCKG 722
+ Y +V Y C++ + + G C N G WS P C+G
Sbjct: 80 RDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 125
Score = 92.2 bits (229), Expect = 3e-22
Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 36/151 (23%)
Query: 279 NCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGVAPTCQ 334
+C +P N G+TIS++C G L GS + C W+ P C+
Sbjct: 2 SCPNPGEIRNGQIDVPGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR 61
Query: 335 YFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYA 394
+ C I++G + E + YA
Sbjct: 62 E-----------------------------IYCPAPPQIDNGIIQGERDHYGYRQSVTYA 92
Query: 395 CHENYTLIGETRRVC---GDGGKWNGTEPQC 422
C++ +T+IGE C D G+W+G P+C
Sbjct: 93 CNKGFTMIGEHSIYCTVNNDEGEWSGPPPEC 123
Score = 89.9 bits (223), Expect = 2e-21
Identities = 30/165 (18%), Positives = 48/165 (29%), Gaps = 48/165 (29%)
Query: 367 CGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQCL 423
C I +G + + GA ++C+ Y L G T C G +W+ P+C
Sbjct: 3 CPNPGEIRNGQIDV-PGGILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPEC- 60
Query: 424 FDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLN 483
I C I G I
Sbjct: 61 ----------------------------------------REIYCPAPPQIDNGIIQGER 80
Query: 484 ETTYLGSEVLYSCSRNYRLVGHPRRSCLESK---VWSDTAPKCEG 525
+ V Y+C++ + ++G C + WS P+C G
Sbjct: 81 DHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEWSGPPPECRG 125
Score = 83.0 bits (205), Expect = 4e-19
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 6/84 (7%)
Query: 785 TRTCTKRGT---WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI 841
+ C G+ WS +P C+ I C P IDNG + Y +V Y C + I
Sbjct: 41 SSFCLISGSSVQWSDPLPECREIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMI 100
Query: 842 GPYLRKCM---EDGSWSGDEPRCE 862
G + C ++G WSG P C
Sbjct: 101 GEHSIYCTVNNDEGEWSGPPPECR 124
Score = 71.8 bits (176), Expect = 4e-15
Identities = 40/199 (20%), Positives = 53/199 (26%), Gaps = 84/199 (42%)
Query: 468 CGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCE 524
C I G I + G+ + +SC+ Y+L G CL S WSD P+C
Sbjct: 3 CPNPGEIRNGQIDVPGGILF-GATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR 61
Query: 525 GKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYK 584
EI CP P + I+ + Y TY
Sbjct: 62 ------------------EIYCPAPPQIDNGIIQGERDHYGYR-----------QSVTY- 91
Query: 585 IGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPL 644
C +G+ + GE
Sbjct: 92 -----------------------------------------------ACNKGFTMIGEHS 104
Query: 645 STC---EDTGSWSGSVPEC 660
C D G WSG PEC
Sbjct: 105 IYCTVNNDEGEWSGPPPEC 123
Score = 71.8 bits (176), Expect = 4e-15
Identities = 31/145 (21%), Positives = 50/145 (34%), Gaps = 28/145 (19%)
Query: 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT---WSSGLPTCK 721
C NP + NG + +G + + C+ Y+L G CL +G+ WS LP C+
Sbjct: 3 CPNPGEIRNGQIDVPGG-ILFGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR 61
Query: 722 GNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQK 781
C +G+ + + +C G + G
Sbjct: 62 ------EIYCPAPPQIDNGIIQGERDHYGYRQSVT--YACNKG---FTMIG--------- 101
Query: 782 VSYTRTCT---KRGTWSGHIPTCKA 803
++ CT G WSG P C+
Sbjct: 102 -EHSIYCTVNNDEGEWSGPPPECRG 125
Score = 55.2 bits (133), Expect = 2e-09
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 806 CSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGS---WSGDEPRCE 862
C +PG I NG++ + + + + + C Y+ G C+ GS WS P C
Sbjct: 3 CPNPGEIRNGQIDVPGGIL-FGATISFSCNTGYKLFGSTSSFCLISGSSVQWSDPLPECR 61
Query: 863 K 863
+
Sbjct: 62 E 62
Score = 45.6 bits (108), Expect = 5e-06
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVST-KLGSTISYACPEGNMLVGSATRTC----KEGFW 326
C+ C +P + N G +++YAC +G ++G + C EG W
Sbjct: 59 ECR--EIYCPAPPQIDNGIIQGERDHYGYRQSVTYACNKGFTMIGEHSIYCTVNNDEGEW 116
Query: 327 TGVAPTCQ 334
+G P C+
Sbjct: 117 SGPPPECR 124
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein,
carbohydrate binding protein; HET: NAG GAL FUC; 1.45A
{Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A*
2j1s_A*
Length = 151
Score = 103 bits (257), Expect = 8e-26
Identities = 34/172 (19%), Positives = 60/172 (34%), Gaps = 36/172 (20%)
Query: 18 SGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPI 77
N+A +PT QSS + A DG + T T+ + WW+VDL + +
Sbjct: 14 GNLNIAYAKPTTQSSVDYNGDPNRAVDGNRNGNFNSGSVTHTRADNPSWWEVDLKKMDKV 73
Query: 78 RIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNSTDL 137
+V+I R Q L + ++ + ++ N + L
Sbjct: 74 GLVKIYNRTDAETQRLSNFDVILYDNNR---NEVAKKHVNNLS----------------- 113
Query: 138 QKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFT 189
G + S + + + ++L+ LSL EVE+F
Sbjct: 114 ---------------GESVSLDF-KEKGARYIKVKLLTSGVPLSLAEVEVFR 149
>1gkn_A Complement receptor type 1; module, SCR, structure; NMR {Homo
sapiens} SCOP: g.18.1.1 g.18.1.1
Length = 128
Score = 102 bits (255), Expect = 8e-26
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 613 TADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVP 672
+ ++ + + IG +KY C Y + TC D WS C C P
Sbjct: 16 KLKTQTTASDFPIGTSLKYECRPEYYGRPFSI-TCLDNLVWSSPKDVCKRKSCKTPPDPV 74
Query: 673 NGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT---WSSGLPTCK 721
NG + ++ G+ + Y C +RL GH+ C+ +G WS+ P C+
Sbjct: 75 NGMVHVITD-IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQ 125
Score = 88.7 bits (220), Expect = 5e-21
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 782 VSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI 841
++ TC WS CK C P NG V ++ S + Y C ++ I
Sbjct: 43 RPFSITCLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITD-IQVGSRITYSCTTGHRLI 101
Query: 842 GPYLRKCMEDGS---WSGDEPRCEK 863
G +C+ G+ WS P C++
Sbjct: 102 GHSSAECILSGNTAHWSTKPPICQR 126
Score = 84.9 bits (210), Expect = 1e-19
Identities = 29/166 (17%), Positives = 45/166 (27%), Gaps = 48/166 (28%)
Query: 364 NVDCGKLEHIEHGTVTLETTRT--THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQ 421
C +H + +TT + G Y C Y + C D W+ +
Sbjct: 3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSIT-CLDNLVWSSPKDV 61
Query: 422 CLFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISY 481
C C G +
Sbjct: 62 C-----------------------------------------KRKSCKTPPDPVNGMVHV 80
Query: 482 LNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCE 524
+ + GS + YSC+ +RL+GH C+ S WS P C+
Sbjct: 81 ITDIQV-GSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQ 125
Score = 79.5 bits (196), Expect = 7e-18
Identities = 26/152 (17%), Positives = 46/152 (30%), Gaps = 38/152 (25%)
Query: 278 ANCGSPDRHVNTTFVGTVST---KLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTC 333
A+C +PD + + +G+++ Y C + TC + W+ C
Sbjct: 4 AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPF-SITCLDNLVWSSPKDVC 62
Query: 334 QYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIY 393
+ C +G V + T G+ Y
Sbjct: 63 KR-----------------------------KSCKTPPDPVNGMVHV-ITDIQVGSRITY 92
Query: 394 ACHENYTLIGETRRVC---GDGGKWNGTEPQC 422
+C + LIG + C G+ W+ P C
Sbjct: 93 SCTTGHRLIGHSSAECILSGNTAHWSTKPPIC 124
Score = 63.7 bits (155), Expect = 3e-12
Identities = 33/162 (20%), Positives = 46/162 (28%), Gaps = 58/162 (35%)
Query: 663 VDCGNPETVPNGGFTLTSNATYY--GTAVLYECDENYRLEGHARRLCLENGTWSSGLPTC 720
C P+ + A+ + GT++ YEC Y +
Sbjct: 4 AHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSIT--------------- 48
Query: 721 KGNEGHARRLCLENGTWSSGLPTCKG--CKTPK-------KSLTRPAL------SCLPGK 765
CL+N WSS CK CKTP +T + SC G
Sbjct: 49 ----------CLDNLVWSSPKDVCKRKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTG- 97
Query: 766 RFYYHRGIFRLQNTQKVSYTRTCTKRGT---WSGHIPTCKAI 804
+ G + C G WS P C+ I
Sbjct: 98 --HRLIG----------HSSAECILSGNTAHWSTKPPICQRI 127
Score = 62.9 bits (153), Expect = 5e-12
Identities = 29/204 (14%), Positives = 48/204 (23%), Gaps = 84/204 (41%)
Query: 465 NIDCGRLTAIPYGSISYLNETTY--LGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPK 522
C + + + +G+ + Y C Y CL++ VWS
Sbjct: 3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSIT-CLDNLVWSSPKDV 61
Query: 523 CEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVAT 582
C+ C P P + ++ V D G S T
Sbjct: 62 CK------------------RKSCKTPPDPVNGMVHV-ITDIQVG-----------SRIT 91
Query: 583 YKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGE 642
Y C G+++ G
Sbjct: 92 Y------------------------------------------------SCTTGHRLIGH 103
Query: 643 PLSTCEDTGS---WSGSVPECIYV 663
+ C +G+ WS P C +
Sbjct: 104 SSAECILSGNTAHWSTKPPICQRI 127
Score = 53.7 bits (129), Expect = 7e-09
Identities = 10/64 (15%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Query: 803 AIDCSHPGSIDNGRVIIMNQTTTY--NSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEPR 860
C P ++ + + ++++Y C P+Y + C+++ WS +
Sbjct: 3 EAHCQAPDHFLFAKLKTQTTASDFPIGTSLKYECRPEYYGRPFSIT-CLDNLVWSSPKDV 61
Query: 861 CEKR 864
C+++
Sbjct: 62 CKRK 65
Score = 51.7 bits (124), Expect = 4e-08
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWT 327
+C+ +C +P VN ++GS I+Y+C G+ L+G ++ C W+
Sbjct: 61 VCK--RKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWS 118
Query: 328 GVAPTCQ 334
P CQ
Sbjct: 119 TKPPICQ 125
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin,
fucose, blood clotting, nicke; HET: FUC; 1.90A
{Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Length = 153
Score = 100 bits (249), Expect = 1e-24
Identities = 36/178 (20%), Positives = 61/178 (34%), Gaps = 36/178 (20%)
Query: 17 ISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYP 76
+ N+A + +QSST G ++ A DG + + + T T E + WWQVDL +
Sbjct: 7 VETENIARGKQASQSSTAYGGAATRAVDGNVDSDYGHHSVTHTNFEDNAWWQVDLGKTEN 66
Query: 77 IRIVRITTRGCCG-HQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNST 135
+ V++ RG L + ++ + N + F G L+
Sbjct: 67 VGKVKLYNRGDGNVANRLSNFDVVLLNEAK--QEVARQHFDSLNGKAELE---------- 114
Query: 136 DLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFTTDGE 193
+ V ++L LSL EVE+F +
Sbjct: 115 -----------------------VFFTAKDARYVKVELKTKNTPLSLAEVEVFRSATT 149
>1ly2_A CD21, complement receptor type 2; epstein BARR virus, regulator of
comple activation, short consensus repeat, viral
receptor; HET: NAG; 1.80A {Homo sapiens} SCOP: g.18.1.1
g.18.1.1 PDB: 1w2r_A 1w2s_B 1ghq_B* 3oed_C
Length = 130
Score = 96.5 bits (240), Expect = 9e-24
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTC----EDTGSWSGSVPECIYVD----CGNPETVPN 673
+G +++Y C +++ GE C + G+W P+C Y + C P VP
Sbjct: 21 PIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPI-VPG 79
Query: 674 GGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWS-SGLPTCK 721
G S +G +V + C N+ + G+ C N W + LPTC
Sbjct: 80 GYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCV 128
Score = 87.2 bits (216), Expect = 2e-20
Identities = 34/161 (21%), Positives = 51/161 (31%), Gaps = 35/161 (21%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLF 424
CG I +G ++ +T G V Y+C + LIGE +C K +GT
Sbjct: 2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGT------ 55
Query: 425 DWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNE 484
W P+ CE N C I
Sbjct: 56 -WDKPAPK--------------------CEY------FNKYSSCPEPIVPGGYKIRGSTP 88
Query: 485 TTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDT-APKCE 524
+ G V ++C N+ + G+ C + +W T P C
Sbjct: 89 YRH-GDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCV 128
Score = 82.6 bits (204), Expect = 6e-19
Identities = 32/147 (21%), Positives = 49/147 (33%), Gaps = 23/147 (15%)
Query: 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLE----NGTWSSGLP 718
CG+P + NG + S GT + Y C +RL G LC+ +GTW P
Sbjct: 2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 61
Query: 719 TCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQN 778
C+ ++ C E S+T +C + G
Sbjct: 62 KCEYFNKYSS--CPEPIVPGGYKIRGSTPYRHGDSVT---FACKTN---FSMNG------ 107
Query: 779 TQKVSYTRTCTKRGTWSG-HIPTCKAI 804
+ + C W +PTC +I
Sbjct: 108 ----NKSVWCQANNMWGPTRLPTCVSI 130
Score = 77.2 bits (190), Expect = 5e-17
Identities = 33/151 (21%), Positives = 48/151 (31%), Gaps = 33/151 (21%)
Query: 279 NCGSPDRHVNTTFVGT-VSTKLGSTISYACPEGNMLVGSATRTCKE-----GFWTGVAPT 332
+CGSP +N +G+ I Y+C L+G + C G W AP
Sbjct: 3 SCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPK 62
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAI 392
C+YF C + + G +T HG
Sbjct: 63 CEYFNKY-------------------------SSCPEPI-VPGGYKIRGSTPYRHGDSVT 96
Query: 393 YACHENYTLIGETRRVCGDGGKWNGTE-PQC 422
+AC N+++ G C W T P C
Sbjct: 97 FACKTNFSMNGNKSVWCQANNMWGPTRLPTC 127
Score = 76.5 bits (188), Expect = 1e-16
Identities = 36/203 (17%), Positives = 57/203 (28%), Gaps = 79/203 (38%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK----VWSDTAP 521
CG I G ISY + +G+ + YSCS +RL+G C+ W AP
Sbjct: 2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 61
Query: 522 KCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVA 581
KCE + CPEP +P + +
Sbjct: 62 KCEYF--------------NKYSSCPEPIVPGGYKIRGST-------------------- 87
Query: 582 TYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEG 641
Y+ G T+ C+ + + G
Sbjct: 88 PYRHG--------------------------------DSVTF--------ACKTNFSMNG 107
Query: 642 EPLSTCEDTGSWSGS-VPECIYV 663
C+ W + +P C+ +
Sbjct: 108 NKSVWCQANNMWGPTRLPTCVSI 130
Score = 68.4 bits (167), Expect = 6e-14
Identities = 21/109 (19%), Positives = 32/109 (29%), Gaps = 15/109 (13%)
Query: 760 SCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAID----CSHPGSIDNG 815
SC FRL + + GTW P C+ + C P + G
Sbjct: 31 SCSGT---------FRLIGEKSLLCITKDKVDGTWDKPAPKCEYFNKYSSCPEPI-VPGG 80
Query: 816 RVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDE-PRCEK 863
I + + +V + C + G C + W P C
Sbjct: 81 YKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGPTRLPTCVS 129
Score = 59.5 bits (144), Expect = 8e-11
Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 4/64 (6%)
Query: 804 IDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCME----DGSWSGDEP 859
C P I NGR+ + + + Y C ++ IG C+ DG+W P
Sbjct: 2 ASCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 61
Query: 860 RCEK 863
+CE
Sbjct: 62 KCEY 65
Score = 44.1 bits (104), Expect = 2e-05
Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 272 ICQ--HNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTG 328
C+ + ++C P G+ + G ++++AC + G+ + C+ W
Sbjct: 62 KCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWCQANNMWGP 121
Query: 329 V-APTCQ 334
PTC
Sbjct: 122 TRLPTCV 128
>2a55_A C4B-binding protein; complement, SCR, CCP module, immune system;
NMR {Homo sapiens}
Length = 133
Score = 95.7 bits (238), Expect = 2e-23
Identities = 29/104 (27%), Positives = 43/104 (41%), Gaps = 6/104 (5%)
Query: 622 TYKIGALVKYRCERGYK-VEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTS 680
+K G +KY C GY TC G W + CIY C +P + NG + +
Sbjct: 23 RFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYN-TFCIYKRCRHPGELRNGQVEIKT 81
Query: 681 NATYYGTAVLYECDENYRLEGHARRLCLENGT---WSSGLPTCK 721
+ +G+ + + C E + L G C WS LP C+
Sbjct: 82 D-LSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCE 124
Score = 81.1 bits (200), Expect = 3e-18
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 783 SYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIG 842
+ T TC G W + C C HPG + NG+V I ++ S +E+ C + IG
Sbjct: 44 TQTLTCNSDGEWVYN-TFCIYKRCRHPGELRNGQVEI-KTDLSFGSQIEFSCSEGFFLIG 101
Query: 843 PYLRKCMEDGS---WSGDEPRCEK 863
+C WS P+CE
Sbjct: 102 STTSRCEVQDRGVGWSHPLPQCEI 125
Score = 76.8 bits (189), Expect = 7e-17
Identities = 29/167 (17%), Positives = 46/167 (27%), Gaps = 50/167 (29%)
Query: 365 VDCGKLEHIEHGTVTLET---TRTTHGAVAIYACHENYTLIGETR-RVCGDGGKWNGTEP 420
++CG + T TR G Y C Y T+ C G+W
Sbjct: 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NT 59
Query: 421 QCLFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSIS 480
C + C + G +
Sbjct: 60 FC-----------------------------------------IYKRCRHPGELRNGQVE 78
Query: 481 YLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPKCE 524
+ ++ GS++ +SCS + L+G C WS P+CE
Sbjct: 79 IKTDLSF-GSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCE 124
Score = 76.1 bits (187), Expect = 2e-16
Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 30/155 (19%)
Query: 663 VDCGNPETVPNG---GFTLTSNATYYGTAVLYECDENYRLE-GHARRLCLENGTWSSGLP 718
++CG P T+ TLT GT + Y C Y C +G W
Sbjct: 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWV-YNT 59
Query: 719 TCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQN 778
C + C G +G K + + SC G ++ G
Sbjct: 60 FCI------YKRCRHPGELRNGQVEIKTDLSFGSQIE---FSCSEG---FFLIG------ 101
Query: 779 TQKVSYTRTCTKRGT---WSGHIPTCKAIDCSHPG 810
S T C + WS +P C+ ++ H
Sbjct: 102 ----STTSRCEVQDRGVGWSHPLPQCEILEHHHHH 132
Score = 73.8 bits (181), Expect = 9e-16
Identities = 34/162 (20%), Positives = 48/162 (29%), Gaps = 40/162 (24%)
Query: 279 NCGSPDRHVNTTFVGTVSTK----LGSTISYACPEG-NMLVGSATRTCKE-GFWTGVAPT 332
NCG P + T+ G+T+ Y C G + T TC G W
Sbjct: 2 NCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVY-NTF 60
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAI 392
C Y C + +G V + T + G+
Sbjct: 61 CIY-----------------------------KRCRHPGELRNGQVEI-KTDLSFGSQIE 90
Query: 393 YACHENYTLIGETRRVC---GDGGKWNGTEPQCLFDWCAEPP 431
++C E + LIG T C G W+ PQC
Sbjct: 91 FSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEILEHHHHH 132
Score = 51.8 bits (124), Expect = 5e-08
Identities = 18/67 (26%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWT 327
C C P N GS I ++C EG L+GS T C + W+
Sbjct: 60 FCI--YKRCRHPGELRNGQVEIKTDLSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWS 117
Query: 328 GVAPTCQ 334
P C+
Sbjct: 118 HPLPQCE 124
Score = 50.6 bits (121), Expect = 1e-07
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 623 YKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNP 668
G+ +++ C G+ + G S CE WS +P+C ++ +
Sbjct: 83 LSFGSQIEFSCSEGFFLIGSTTSRCEVQDRGVGWSHPLPQCEILEHHHH 131
Score = 48.7 bits (116), Expect = 6e-07
Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 5/65 (7%)
Query: 804 IDCSHPGSIDNGRVIIMN---QTTTYNSAVEYHCVPQYQRIGP-YLRKCMEDGSWSGDEP 859
++C P ++ + + + ++Y C+P Y R C DG W +
Sbjct: 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYN-T 59
Query: 860 RCEKR 864
C +
Sbjct: 60 FCIYK 64
Score = 46.4 bits (110), Expect = 3e-06
Identities = 14/106 (13%), Positives = 28/106 (26%), Gaps = 24/106 (22%)
Query: 466 IDCGRLTAIPYGSI---SYLNETTYLGSEVLYSCSRNYRLV-GHPRRSCLESKVWSDTAP 521
++CG + + + + G+ + Y+C Y +C W
Sbjct: 1 MNCGPPPTLSFAAPMDITLTETRFKTGTTLKYTCLPGYVRSHSTQTLTCNSDGEWVYN-T 59
Query: 522 KCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYG 567
C RC P + + + D +G
Sbjct: 60 FCI------------------YKRCRHPGELRNGQVEI-KTDLSFG 86
>1gkg_A Complement receptor type 1; module, SCR, structure, sushi; NMR
{Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 1ppq_A
Length = 136
Score = 94.2 bits (234), Expect = 8e-23
Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 14/112 (12%)
Query: 623 YKIGALVKYRCERGYKVEGEPLSTCEDTGS---WSGSVPECIYVDCGNPETVPNGGFTLT 679
++G+ + Y C G+++ G + C +G+ WS P C + CG P T+ NG F T
Sbjct: 24 IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFIST 83
Query: 680 SNATY-YGTAVLYECDE------NYRLEGHARRLCLEN----GTWSSGLPTC 720
+ + YG+ V Y C+ + L G C N G WS P C
Sbjct: 84 NRENFHYGSVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQC 135
Score = 88.0 bits (218), Expect = 1e-20
Identities = 38/169 (22%), Positives = 54/169 (31%), Gaps = 48/169 (28%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC---GDGGKWNGTEPQ 421
C +G V + T G+ Y+C + LIG + C G+ W+ P
Sbjct: 5 KSCKTPPDPVNGMVHV-ITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPI 63
Query: 422 CLFDWCAEPPQISGGIVTTSGRRT---GSVATYSCEPGFILFGSNVNIDCGRLTAIPYGS 478
C C PP I+ G ++ R GSV TY C G
Sbjct: 64 CQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLG---------------------- 101
Query: 479 ISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK----VWSDTAPKC 523
+ + LVG P C + +WS AP+C
Sbjct: 102 ---------------SRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQC 135
Score = 83.0 bits (205), Expect = 7e-19
Identities = 35/165 (21%), Positives = 56/165 (33%), Gaps = 44/165 (26%)
Query: 274 QHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTC----KEGFWTGV 329
+ +C +P VN ++GS I+Y+C G+ L+G ++ C W+
Sbjct: 1 EAEAKSCKTPPDPVNGMVHVITDIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60
Query: 330 APTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVT-LETTRTTHG 388
P CQ + CG I +G +G
Sbjct: 61 PPICQR-----------------------------IPCGLPPTIANGDFISTNRENFHYG 91
Query: 389 AVAIYACHE------NYTLIGETRRVC----GDGGKWNGTEPQCL 423
+V Y C+ + L+GE C G W+G PQC+
Sbjct: 92 SVVTYRCNLGSRGRKVFELVGEPSIYCTSNDDQVGIWSGPAPQCI 136
Score = 74.2 bits (182), Expect = 7e-16
Identities = 37/151 (24%), Positives = 55/151 (36%), Gaps = 24/151 (15%)
Query: 659 ECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT---WSS 715
E C P NG + ++ G+ + Y C +RL GH+ C+ +G WS+
Sbjct: 1 EAEAKSCKTPPDPVNGMVHVITD-IQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWST 59
Query: 716 GLPTCKGNEGHARRLC-----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYH 770
P C+ R C + NG + S T + +T C G
Sbjct: 60 KPPICQ------RIPCGLPPTIANGDFIS---TNRENFHYGSVVT---YRCNLG---SRG 104
Query: 771 RGIFRLQNTQKVSYTRTCTKRGTWSGHIPTC 801
R +F L + T + G WSG P C
Sbjct: 105 RKVFELVGEPSIYCTSNDDQVGIWSGPAPQC 135
Score = 73.8 bits (181), Expect = 9e-16
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 785 TRTCTKRGT---WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVP---- 836
+ C G WS P C+ I C P +I NG I N+ Y S V Y C
Sbjct: 45 SAECILSGNTAHWSTKPPICQRIPCGLPPTIANGDFISTNRENFHYGSVVTYRCNLGSRG 104
Query: 837 --QYQRIGPYLRKCMED----GSWSGDEPRC 861
++ +G C + G WSG P+C
Sbjct: 105 RKVFELVGEPSIYCTSNDDQVGIWSGPAPQC 135
Score = 63.8 bits (155), Expect = 3e-12
Identities = 42/209 (20%), Positives = 58/209 (27%), Gaps = 90/209 (43%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLES---KVWSDTAPK 522
C G + + + GS + YSC+ +RL+GH C+ S WS P
Sbjct: 5 KSCKTPPDPVNGMVHVITDIQV-GSRITYSCTTGHRLIGHSSAECILSGNTAHWSTKPPI 63
Query: 523 CEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVAT 582
C+ I C P A+
Sbjct: 64 CQ------------------RIPCGLPPTIANG--------------------------- 78
Query: 583 YKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERG------ 636
+S + YG SV TY RC G
Sbjct: 79 ------------DFISTNRENFHYG-----------SVVTY--------RCNLGSRGRKV 107
Query: 637 YKVEGEPLSTCED----TGSWSGSVPECI 661
+++ GEP C G WSG P+CI
Sbjct: 108 FELVGEPSIYCTSNDDQVGIWSGPAPQCI 136
Score = 61.5 bits (149), Expect = 2e-11
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 801 CKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGS---WSGD 857
+A C P NG V ++ S + Y C ++ IG +C+ G+ WS
Sbjct: 2 AEAKSCKTPPDPVNGMVHVIT-DIQVGSRITYSCTTGHRLIGHSSAECILSGNTAHWSTK 60
Query: 858 EPRCEK 863
P C++
Sbjct: 61 PPICQR 66
>3gov_A MAsp-1; complement, serine protease, beta barrel, hydrolase,
hydroxy immune response, innate immunity, sushi,
coagulation, compl pathway; 2.55A {Homo sapiens} PDB:
4djz_A
Length = 155
Score = 93.9 bits (233), Expect = 2e-22
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 621 ATYKIGALVKYRCERGYKVEGEPLS------TCEDTGSWSGSVPECIYVDCGNPETVPNG 674
A Y V C+ GYKV + + C G+WS +P C VDC P + +G
Sbjct: 24 AKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHG 83
Query: 675 GFTLTS--NATYYGTAVLYECDENYRL---EGHARRLCLENGTWSSGLPTCK 721
T ++ N T Y + + Y C E Y C G W + +
Sbjct: 84 LITFSTRNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVLGRS 135
Score = 83.5 bits (206), Expect = 6e-19
Identities = 29/153 (18%), Positives = 48/153 (31%), Gaps = 22/153 (14%)
Query: 660 CIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRL------CLENGTW 713
+C + +G + ++ VL CD Y++ + CL++GTW
Sbjct: 3 MTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTW 62
Query: 714 SSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGI 773
S+ +PTCK C G GL T + SC +
Sbjct: 63 SNKIPTCK------IVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNNN- 115
Query: 774 FRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDC 806
+ TC+ +G W + C
Sbjct: 116 ---------TGIYTCSAQGVWMNKVLGRSLPTC 139
Score = 83.5 bits (206), Expect = 7e-19
Identities = 32/108 (29%), Positives = 45/108 (41%), Gaps = 12/108 (11%)
Query: 760 SCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVII 819
SC G Y N + ++ C K GTWS IPTCK +DC PG +++G +
Sbjct: 35 SCDTG---YKVLK----DNVEMDTFQIECLKDGTWSNKIPTCKIVDCRAPGELEHGLITF 87
Query: 820 --MNQTTTYNSAVEYHCVPQYQRI---GPYLRKCMEDGSWSGDEPRCE 862
N TTY S ++Y C Y ++ + C G W
Sbjct: 88 STRNNLTTYKSEIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVLGRS 135
Score = 78.9 bits (194), Expect = 3e-17
Identities = 29/198 (14%), Positives = 51/198 (25%), Gaps = 64/198 (32%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRV------CGDGGKWNGT 418
+C +L+ HG + + + +C Y ++ + + C G W+
Sbjct: 6 NECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNK 65
Query: 419 EPQCLFDWCAEPPQISGGIVTTSGRRT----GSVATYSCEPGFILFGSNVNIDCGRLTAI 474
P C C P ++ G++T S R S YSC+ + +N
Sbjct: 66 IPTCKIVDCRAPGELEHGLITFSTRNNLTTYKSEIKYSCQEPYYKMLNN----------- 114
Query: 475 PYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVC 534
+C VW + + C
Sbjct: 115 -----------------------------NTGIYTCSAQGVWMNKVLGRS------LPTC 139
Query: 535 SNVAVDRREIRCPEPTLP 552
V C P
Sbjct: 140 LPV--------CGLPKFS 149
Score = 71.9 bits (176), Expect = 8e-15
Identities = 30/175 (17%), Positives = 48/175 (27%), Gaps = 45/175 (25%)
Query: 280 CGSPDRHVNTTFVGT-VSTKLGSTISYACPEGNMLVGSATRTC-------KEGFWTGVAP 331
C V+ + + +C G ++ K+G W+ P
Sbjct: 8 CPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIP 67
Query: 332 TCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTR--TTHGA 389
TC+ VDC +EHG +T T TT+ +
Sbjct: 68 TCKI-----------------------------VDCRAPGELEHGLITFSTRNNLTTYKS 98
Query: 390 VAIYACHENYTLI---GETRRVCGDGGKWNGTEPQCLFDWCAE---PPQISGGIV 438
Y+C E Y + C G W C P+ S ++
Sbjct: 99 EIKYSCQEPYYKMLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFSRKLM 153
Score = 67.7 bits (165), Expect = 2e-13
Identities = 32/222 (14%), Positives = 51/222 (22%), Gaps = 88/222 (39%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRS------CLESKVWSDT 519
+C L +G I + +VL SC Y+++ CL+ WS+
Sbjct: 6 NECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNK 65
Query: 520 APKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASS 579
P C+ + C P H +++ + + L
Sbjct: 66 IPTCK------------------IVDCRAPGELEHGLITFSTRNNLT------------- 94
Query: 580 VATYKIGALPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYK- 638
Y S Y C+ Y
Sbjct: 95 -------------------------TYK-----------SEIKY--------SCQEPYYK 110
Query: 639 --VEGEPLSTCEDTGSWSGSVPECIYV----DCGNPETVPNG 674
+ TC G W V CG P+
Sbjct: 111 MLNNNTGIYTCSAQGVWMNKVLGRSLPTCLPVCGLPKFSRKL 152
Score = 63.8 bits (155), Expect = 5e-12
Identities = 12/70 (17%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 800 TCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLR------KCMEDGS 853
+ +C +G++ + V C Y+ + + +C++DG+
Sbjct: 2 SMTGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGT 61
Query: 854 WSGDEPRCEK 863
WS P C+
Sbjct: 62 WSNKIPTCKI 71
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A
{Morone saxatilis}
Length = 293
Score = 90.5 bits (223), Expect = 5e-20
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 18 SGTNVALRRPTNQSSTIRG--APSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPY 75
+ NVALR QS+ + NA DG + + CT T ++ +PWW+VDLL PY
Sbjct: 2 NYKNVALRGKATQSARYLHTHGAAYNAIDGNRNSDFEAGSCTHTVEQTNPWWRVDLLEPY 61
Query: 76 PIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQK--NPLCAWFPGTLGHQPL 124
+ + IT RG C + L +EI +GNS NP
Sbjct: 62 IVTSITITNRGDCCPERLNGVEIHIGNSLQENGVANPRVGVISHIPAGISH 112
Score = 70.9 bits (172), Expect = 2e-13
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 32/174 (18%)
Query: 15 HFISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRP 74
+G N+AL+ QSS + NA DG + CT T+ + PWW++DL +
Sbjct: 147 RAPTGENLALKGKATQSSLFESGIAYNAIDGNQANNWEMASCTHTKNTMDPWWRMDLSQT 206
Query: 75 YPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKNPLCAWFPGTLGHQPLQDLEIRVGNS 134
+ + V++T R + + EIR+G+S D
Sbjct: 207 HRVFSVKVTNRDSF-EKRINGAEIRIGDSLD----------------------------- 236
Query: 135 TDLQKNPLCAWFPGTLEEGITKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIF 188
+ NP CA G + F C + G+ V I + G E L+LCEVE++
Sbjct: 237 NNGNHNPRCAVITSI-PAGASTEFQC-NGMDGRYVNIVIPGREEYLTLCEVEVY 288
>2uwn_A H factor 1, human complement factor H; alternative splicing,
sucrose octasulphate, AGE-related macular degeneration,
complement alternate pathway; HET: SCR; 2.35A {Homo
sapiens} PDB: 2v8e_A* 2ic4_A 2w80_A 2w81_A 2jgw_A 2jgx_A
Length = 187
Score = 85.8 bits (212), Expect = 2e-19
Identities = 34/182 (18%), Positives = 52/182 (28%), Gaps = 26/182 (14%)
Query: 623 YKIGALVKYRCERGYKVEGEPLS---TCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT 679
+G Y C+ ++ C G WS +VP C P + NG
Sbjct: 28 VAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPAVPCL--RKCYFPY-LENGYNQNH 83
Query: 680 SNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSS 739
G ++ C Y L + WS + + +ENG S
Sbjct: 84 GRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVKTCSKSSIDIENGFIS- 142
Query: 740 GLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIP 799
+ + C G + + + S + TC K WS P
Sbjct: 143 ------ESQYTYALKEKAKYQCKLG---------YVTAD-GETSGSITCGK-DGWSA-QP 184
Query: 800 TC 801
TC
Sbjct: 185 TC 186
Score = 83.4 bits (206), Expect = 2e-18
Identities = 28/174 (16%), Positives = 44/174 (25%), Gaps = 38/174 (21%)
Query: 296 STKLGSTISYACPEGNMLVGSA---TRTCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFL 352
+G SY C E + C + W+ P +
Sbjct: 27 PVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPCLR------------------ 68
Query: 353 SKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDG 412
C +E+G + G ACH Y L V
Sbjct: 69 -------------KCYFPY-LENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCME 114
Query: 413 GKWNGTEPQCLFDWCAEPP-QISGGIVTTSGRR--TGSVATYSCEPGFILFGSN 463
W+ T C++ I G ++ S A Y C+ G++
Sbjct: 115 NGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGE 168
Score = 83.1 bits (205), Expect = 2e-18
Identities = 39/183 (21%), Positives = 53/183 (28%), Gaps = 37/183 (20%)
Query: 372 HIEHGTVTLETTR-----TTHGAVAIYACHENYTLIGE---TRRVCGDGGKWNGTEPQCL 423
I+HG + E R G Y C E++ C G W+ CL
Sbjct: 10 DIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSP-AVPCL 67
Query: 424 FDWCAEPPQISGGIVTTSGRRT--GSVATYSCEPGFILFGSNVNI--------------- 466
C P + G GR+ G +C PG+ L + +
Sbjct: 68 -RKC-YFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIR 125
Query: 467 --DCGRL-TAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRS---CLESKVWSDTA 520
C + I G IS T L + Y C Y C + WS
Sbjct: 126 VKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDG-WSAQ- 183
Query: 521 PKC 523
P C
Sbjct: 184 PTC 186
Score = 81.5 bits (201), Expect = 7e-18
Identities = 42/212 (19%), Positives = 60/212 (28%), Gaps = 46/212 (21%)
Query: 665 CGNPETVPNGGFTLTSNATYY-----GTAVLYECDENYRLEG---HARRLCLENGTWSSG 716
C P+ + +GG + Y G Y CDE++ C ++G WS
Sbjct: 6 CDYPD-IKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDG-WSPA 63
Query: 717 LPTCKGNEGHARRLC----LENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRG 772
+P R C LENG ++C PG
Sbjct: 64 VPCL--------RKCYFPYLENGYNQ-------NHGRKFVQGKSIDVACHPG-------- 100
Query: 773 IFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGS-IDNGRVIIMNQTTTYNSAVE 831
+ L Q T WS + CS I+NG + T +
Sbjct: 101 -YALPKAQ----TTVTCMENGWSPTPRCIRVKTCSKSSIDIENGFISESQYTYALKEKAK 155
Query: 832 YHCVPQYQRIGPYLRKCME--DGSWSGDEPRC 861
Y C Y + WS +P C
Sbjct: 156 YQCKLGYVTADGETSGSITCGKDGWSA-QPTC 186
Score = 80.7 bits (199), Expect = 1e-17
Identities = 20/113 (17%), Positives = 31/113 (27%), Gaps = 4/113 (3%)
Query: 611 IKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPET 670
++ + + + G + C GY + + WS + C
Sbjct: 75 LENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIRVKTCSKSSI 134
Query: 671 VPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLE--NGTWSSGLPTC 720
GF S TY Y+C Y + W S PTC
Sbjct: 135 DIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDGW-SAQPTC 186
Score = 60.7 bits (147), Expect = 1e-10
Identities = 21/165 (12%), Positives = 35/165 (21%), Gaps = 40/165 (24%)
Query: 429 EPPQISGGIVTTSGRRT-------GSVATYSCEPGFILFGSNV--NIDCGR--------- 470
+ P I G + R G +Y C+ F + +I C +
Sbjct: 7 DYPDIKHGGLYHENMRRPYFPVAVGKYYSYYCDEHFETPSGSYWDHIHCTQDGWSPAVPC 66
Query: 471 -----LTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEG 525
+ G G + +C Y L WS T
Sbjct: 67 LRKCYFPYLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCIR- 125
Query: 526 KATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTL 570
+K C + +S +
Sbjct: 126 -----VKTC-----------SKSSIDIENGFISESQYTYALKEKA 154
Score = 59.2 bits (143), Expect = 3e-10
Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Query: 785 TRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPY 844
CT+ G WS +P + C P ++NG + +++ C P Y
Sbjct: 52 HIHCTQDG-WSPAVPCLRK--CYFP-YLENGYNQNHGRKFVQGKSIDVACHPGYALPKAQ 107
Query: 845 LRKCMEDGSWSGDEPRCEKR 864
+ WS +
Sbjct: 108 TTVTCMENGWSPTPRCIRVK 127
Score = 57.3 bits (138), Expect = 1e-09
Identities = 25/130 (19%), Positives = 34/130 (26%), Gaps = 34/130 (26%)
Query: 298 KLGSTISYACPEGNMLVGSATR-TCKEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLF 356
G +I AC G L + T TC E W+
Sbjct: 88 VQGKSIDVACHPGYALPKAQTTVTCMENGWSPTPRCI----------------------- 124
Query: 357 RESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRR---VCGDGG 413
R+ IE+G ++ A Y C Y CG G
Sbjct: 125 -----RVKTCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDG 179
Query: 414 KWNGTEPQCL 423
W+ P C+
Sbjct: 180 -WSAQ-PTCI 187
Score = 35.7 bits (82), Expect = 0.033
Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 279 NCGSPDRHVNTTFVGTVST--KLGSTISYACPEGNMLVG---SATRTCKEGFWTGVAPTC 333
C + F+ L Y C G + S + TC + W+ PTC
Sbjct: 128 TCSKSSIDIENGFISESQYTYALKEKAKYQCKLGYVTADGETSGSITCGKDGWSAQ-PTC 186
>2qy0_A Complement C1R subcomponent; serine protease, beta barrel,
complement pathway like domain, glycoprotein, hydrolase,
hydroxylation, immune response; 2.60A {Homo sapiens}
Length = 159
Score = 84.4 bits (208), Expect = 3e-19
Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 17/123 (13%)
Query: 616 SASSVATYKIGALVKYRCERGYKVEGE------PLSTCEDTGSWSGSVPECIYVDCGNPE 669
+ Y+ C++GY++ + C+D G+W ++P C DCG P
Sbjct: 17 IQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPR 76
Query: 670 TVPNGGFTLTS--NATYYGTAVLYECDENY---------RLEGHARRLCLENGTWSSGLP 718
+PNG F T+ Y + Y C E Y R C G W +
Sbjct: 77 NLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQK 136
Query: 719 TCK 721
K
Sbjct: 137 GEK 139
Score = 81.0 bits (199), Expect = 5e-18
Identities = 36/166 (21%), Positives = 56/166 (33%), Gaps = 23/166 (13%)
Query: 663 VDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEG------HARRLCLENGTWSS 715
C P+T+ Y + + C + Y+L +C ++GTW
Sbjct: 3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 62
Query: 716 GLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFR 775
+P CK + R L NG + T G T K + C Y++ R
Sbjct: 63 AMPRCKIKDCGQPRN-LPNGDFRY--TTTMGVNTYKARIQY---YCHEP----YYKMQTR 112
Query: 776 LQNTQKVSYTRTCTKRGTWSGH-----IPTCKAIDCSHPGSIDNGR 816
+ + TCT +G W IP C + C P + R
Sbjct: 113 AGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPV-CGKPVNPVEQR 157
Score = 74.0 bits (181), Expect = 2e-15
Identities = 26/114 (22%), Positives = 41/114 (35%), Gaps = 18/114 (15%)
Query: 760 SCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVII 819
+C G Y N S+T C GTW +P CK DC P ++ NG
Sbjct: 33 TCKQG---YQLIE----GNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGDFRY 85
Query: 820 MNQ--TTTYNSAVEYHCVPQYQRI---------GPYLRKCMEDGSWSGDEPRCE 862
TY + ++Y+C Y ++ + C G W ++ +
Sbjct: 86 TTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEK 139
Score = 71.7 bits (175), Expect = 9e-15
Identities = 27/201 (13%), Positives = 46/201 (22%), Gaps = 59/201 (29%)
Query: 365 VDCGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIGETR------RVCGDGGKWNG 417
C + + ++ T+ I C + Y LI + VC D G W+
Sbjct: 3 QACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 62
Query: 418 TEPQCLFDWCAEPPQISGGIVTTSGRRT----GSVATYSCEPGFILFGSNVNIDCGRLTA 473
P+C C +P + G + + Y C +
Sbjct: 63 AMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQ------------ 110
Query: 474 IPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKV 533
R +C +W + + I
Sbjct: 111 ----------------------TRAGSRESEQGVYTCTAQGIWKNEQKGEK------IPR 142
Query: 534 CSNVAVDRREIRCPEPTLPAH 554
C C +P P
Sbjct: 143 C--------LPVCGKPVNPVE 155
Score = 57.9 bits (139), Expect = 6e-10
Identities = 34/185 (18%), Positives = 51/185 (27%), Gaps = 55/185 (29%)
Query: 277 PANCGSPDRHVNTTFVGTVSTK--LGSTISYACPEGNMLVG------SATRTCKE-GFWT 327
C P T + + + C +G L+ S T C++ G W
Sbjct: 2 TQACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWH 61
Query: 328 GVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTR--T 385
P C+ DCG+ ++ +G TT
Sbjct: 62 RAMPRCKI-----------------------------KDCGQPRNLPNGDFRYTTTMGVN 92
Query: 386 THGAVAIYACHENY---------TLIGETRRVCGDGGKWNGTE-----PQCLFDWCAEPP 431
T+ A Y CHE Y + C G W + P+CL C +P
Sbjct: 93 TYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPV-CGKPV 151
Query: 432 QISGG 436
Sbjct: 152 NPVEQ 156
Score = 52.9 bits (126), Expect = 3e-08
Identities = 16/75 (21%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 803 AIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGP------YLRKCMEDGSWS 855
C P ++D +I Q + C YQ I + C +DG+W
Sbjct: 2 TQACPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWH 61
Query: 856 GDEPRCEKRFNSGIP 870
PRC+ +
Sbjct: 62 RAMPRCKIKDCGQPR 76
Score = 39.0 bits (90), Expect = 0.002
Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 15/71 (21%)
Query: 618 SSVATYKIGALVKYRCERGY---------KVEGEPLSTCEDTGSWSGS-----VPECIYV 663
+++ A ++Y C Y + + + TC G W +P C+ V
Sbjct: 87 TTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGIWKNEQKGEKIPRCLPV 146
Query: 664 DCGNPETVPNG 674
CG P
Sbjct: 147 -CGKPVNPVEQ 156
>3r62_A H factor 1, complement factor H; immunity, repeating sushi domain,
regulator of C activation, C3D, immune system; 1.52A
{Homo sapiens} PDB: 2bzm_A 3oxu_D 3rj3_D 2g7i_A 3kxv_A
3kzj_A 2xqw_C
Length = 129
Score = 82.4 bits (203), Expect = 8e-19
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFT 677
++ Y + V+Y+C+ Y++EG TC + G WS P+C++ + E + N
Sbjct: 21 FPLSVYAPASSVEYQCQNLYQLEGNKRITCRN-GQWSEP-PKCLHPCVISREIMENYNIA 78
Query: 678 LTSNATY-----YGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTC 720
L A G +V + C YRL + L PTC
Sbjct: 79 LRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC 126
Score = 72.3 bits (177), Expect = 2e-15
Identities = 33/144 (22%), Positives = 45/144 (31%), Gaps = 19/144 (13%)
Query: 659 ECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRLEGHARRLCLENGTWSSGL 717
E + CG P + NG T + Y ++V Y+C Y+LEG+ R C NG W S
Sbjct: 1 EAEFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITC-RNGQW-SEP 58
Query: 718 PTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQ 777
P C +R + K +S+ C G Y
Sbjct: 59 PKCLHPCVISREIMENYNIALRWRAKQKLYSRTGESVE---FVCKRG---YRLSS----- 107
Query: 778 NTQKVSYTRTCTKRGTWSGHIPTC 801
T PTC
Sbjct: 108 -----RSHTLRTTCWDGKLEYPTC 126
Score = 70.8 bits (173), Expect = 1e-14
Identities = 27/163 (16%), Positives = 42/163 (25%), Gaps = 39/163 (23%)
Query: 365 VDCGKLEHIEHGTVTLETTRT-THGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL 423
CG I++G +T + Y C Y L G R C +G +W+ P+CL
Sbjct: 5 GKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNG-QWSEP-PKCL 62
Query: 424 FDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLN 483
+ + R + + +
Sbjct: 63 HPCVISREIMENYNIALRWRAKQKLYSRT------------------------------- 91
Query: 484 ETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGK 526
G V + C R YRL P C +
Sbjct: 92 -----GESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTCAKR 129
Score = 63.5 bits (154), Expect = 4e-12
Identities = 21/152 (13%), Positives = 35/152 (23%), Gaps = 29/152 (19%)
Query: 273 CQHNPANCGSPDRHVNTTFVGTVSTKL--GSTISYACPEGNMLVGSATRTCKEGFWTGVA 330
+ CG P N + S++ Y C L G+ TC+ G W+
Sbjct: 2 AE--FGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITCRNGQWSEPP 59
Query: 331 PTCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAV 390
+ + N + L + G
Sbjct: 60 KCLHPCVISREIMENYNIALRWRAKQKLYS-------------------------RTGES 94
Query: 391 AIYACHENYTLIGETRRVCGDGGKWNGTEPQC 422
+ C Y L + + P C
Sbjct: 95 VEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTC 126
Score = 58.9 bits (142), Expect = 1e-10
Identities = 16/87 (18%), Positives = 26/87 (29%), Gaps = 7/87 (8%)
Query: 783 SYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTT-----TYNSAVEYHCVPQ 837
+ TC G WS P C ++N + + + +VE+ C
Sbjct: 45 NKRITCRN-GQWSEP-PKCLHPCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRG 102
Query: 838 YQRIGPYLRKCMEDGSWSGDEPRCEKR 864
Y+ + P C KR
Sbjct: 103 YRLSSRSHTLRTTCWDGKLEYPTCAKR 129
Score = 54.2 bits (130), Expect = 6e-09
Identities = 20/64 (31%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 801 CKAIDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEP 859
+ C P IDNG + + S+VEY C YQ G C +G WS P
Sbjct: 2 AEFGKCGPPPPIDNGDITSFPLSVYAPASSVEYQCQNLYQLEGNKRITC-RNGQWSE-PP 59
Query: 860 RCEK 863
+C
Sbjct: 60 KCLH 63
Score = 42.7 bits (100), Expect = 6e-05
Identities = 10/51 (19%), Positives = 17/51 (33%)
Query: 611 IKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECI 661
I A + G V++ C+RGY++ + P C
Sbjct: 77 IALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEYPTCA 127
Score = 35.7 bits (82), Expect = 0.013
Identities = 8/63 (12%), Positives = 19/63 (30%), Gaps = 1/63 (1%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVA 330
C + + + + + ++ G ++ + C G L +
Sbjct: 64 PCVISREIMENYNIALRWRAKQKLYSRTGESVEFVCKRGYRLSSRSHTLRTTCWDGKLEY 123
Query: 331 PTC 333
PTC
Sbjct: 124 PTC 126
>2ehf_A CUB and sushi domain-containing protein 1; CUB and sushi multiple
domains protein 1, CSMD1, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 73
Score = 79.0 bits (195), Expect = 2e-18
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 653 WSGSVPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGT 712
SGS E CG+P G T ++ +G + +EC + L G C +N
Sbjct: 2 SSGSSGEIEKGGCGDPGIPAYG--KRTGSSFLHGDTLTFECPAAFELVGERVITCQQNNQ 59
Query: 713 WSSGLPTCKG 722
WS P+C G
Sbjct: 60 WSGNKPSCSG 69
Score = 76.4 bits (188), Expect = 2e-17
Identities = 14/70 (20%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 794 WSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGS 853
SG + C PG G+ + + + + C ++ +G + C ++
Sbjct: 2 SSGSSGEIEKGGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQ 59
Query: 854 WSGDEPRCEK 863
WSG++P C
Sbjct: 60 WSGNKPSCSG 69
Score = 58.2 bits (141), Expect = 6e-11
Identities = 15/63 (23%), Positives = 23/63 (36%), Gaps = 2/63 (3%)
Query: 365 VDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLF 424
CG +G T + HG + C + L+GE C +W+G +P C
Sbjct: 12 GGCGDPGIPAYGKRT--GSSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSG 69
Query: 425 DWC 427
Sbjct: 70 PSS 72
Score = 57.9 bits (140), Expect = 6e-11
Identities = 12/45 (26%), Positives = 22/45 (48%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCG 666
++ G + + C +++ GE + TC+ WSG+ P C G
Sbjct: 29 SFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSGPSSG 73
Score = 56.7 bits (137), Expect = 2e-10
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 2/60 (3%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEG 525
CG YG + + G + + C + LVG +C ++ WS P C G
Sbjct: 12 GGCGDPGIPAYGKRTG--SSFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNKPSCSG 69
Score = 51.7 bits (124), Expect = 1e-08
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Query: 272 ICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVA 330
+ CG P G+ S G T+++ CP LVG TC++ W+G
Sbjct: 8 EIE--KGGCGDPGIPAYGKRTGS-SFLHGDTLTFECPAAFELVGERVITCQQNNQWSGNK 64
Query: 331 PTCQ 334
P+C
Sbjct: 65 PSCS 68
Score = 40.1 bits (94), Expect = 1e-04
Identities = 17/79 (21%), Positives = 24/79 (30%), Gaps = 17/79 (21%)
Query: 737 WSSGLPTCK--GCKTPKKSLTRPALSCLPGKRFYYHRGI-------FRLQNTQKVSYTRT 787
S + GC P PA G F + + F L + T
Sbjct: 2 SSGSSGEIEKGGCGDP----GIPAYGKRTGSSFLHGDTLTFECPAAFELVGER----VIT 53
Query: 788 CTKRGTWSGHIPTCKAIDC 806
C + WSG+ P+C
Sbjct: 54 CQQNNQWSGNKPSCSGPSS 72
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex,
innate IMMU system, blood, membrane, cytolysin, immune
SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens}
PDB: 4a5w_B* 4e0s_B*
Length = 913
Score = 88.8 bits (219), Expect = 3e-18
Identities = 36/250 (14%), Positives = 68/250 (27%), Gaps = 34/250 (13%)
Query: 622 TYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLTSN 681
Y +G V+ C G++ G C G+W EC +C P T
Sbjct: 640 LYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTITPFQR 699
Query: 682 ATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGL 741
G ++ C + + + G +R C + +W+ +
Sbjct: 700 LYRIGESIELTCPKGFVVAGPSRYTC-------------------------QGNSWTPPI 734
Query: 742 PTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSY-TRTCTKRGTWSGHI-- 798
C+ +LT+ C G++ I + C + +
Sbjct: 735 SNSLTCEKD--TLTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTS 792
Query: 799 PTCK--AIDCSHPGSIDNGRVIIMNQTTTYNSAVE--YHCVPQYQRIGPYLRKCMEDGSW 854
P CK A C + + + +E ++ C +
Sbjct: 793 PACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKC 852
Query: 855 SGDEPRCEKR 864
S +C
Sbjct: 853 SASTSKCVCL 862
Score = 80.3 bits (197), Expect = 1e-15
Identities = 35/251 (13%), Positives = 60/251 (23%), Gaps = 26/251 (10%)
Query: 617 ASSVATYKIGALVKYRCERGYKVEGE--PLSTCEDTGSWSGSVPECIYVDCGNPETVPNG 674
SV A++ + + T + + + C NG
Sbjct: 452 LESVKEN--PAVIDFELAPIVDLVRNIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNG 509
Query: 675 GFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWS--SGLPTCKGNEGHARRLCL 732
T S EN + + +G W S TC +R
Sbjct: 510 RPT-LSGTECLCVCQSGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDATYKRSRTREC 568
Query: 733 ENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRG 792
N G C+G +
Sbjct: 569 NNPAPQRGGKRCEG-------------------EKRQEEDCTFSIMENNGQPCINDDEEM 609
Query: 793 TWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDG 852
C P +NG + Q VE C+ ++ +G +C+ DG
Sbjct: 610 KEVDLPEIEADSGCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDG 669
Query: 853 SWSGDEPRCEK 863
+W + C++
Sbjct: 670 TWRQGDVECQR 680
Score = 66.1 bits (160), Expect = 4e-11
Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 367 CGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDW 426
C + E+G + E G +C + +G C G W + +C
Sbjct: 623 CPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTE 682
Query: 427 CAEPPQISGGIVTTSGR--RTGSVATYSCEPGFILFGSNVNIDCG 469
C +P +T R R G +C GF++ G + C
Sbjct: 683 CIKPVVQEVLTITPFQRLYRIGESIELTCPKGFVVAGPSR-YTCQ 726
Score = 59.1 bits (142), Expect = 4e-09
Identities = 61/441 (13%), Positives = 111/441 (25%), Gaps = 38/441 (8%)
Query: 385 TTHGAVAIYACHENYTLIGE--TRRVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSG 442
+ AV + L+ + + E FD C P + G T SG
Sbjct: 456 KENPAVIDFELAPIVDLVRNIPCAVTKRNNLRKALQEYAAKFDPCQCAPCPNNGRPTLSG 515
Query: 443 RRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRL 502
V S S + TY C+
Sbjct: 516 TECLCVCQSGTYGENCEKQSPDYKSNAVDGQWGCWSSWSTCDATY-KRSRTRECNNPAPQ 574
Query: 503 VGHPRRSCLESKVWSDTAPKCEGKATKDIKVCSNVAVD-----RREIRCPEPTLPAHSIL 557
G R + + T E I + + CP+P P + +
Sbjct: 575 RGGKRCEGEKRQEEDCTFSIMENNGQPCINDDEEMKEVDLPEIEADSGCPQPVPPENGFI 634
Query: 558 SVTGNDRLYGRTLIKTADSASSVATYKIGA-LPTLPAHSILSVTGNDRLYGRTLIKTADS 616
L G + + + Y+ LP + +
Sbjct: 635 RNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQEVLTI 694
Query: 617 ASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGF 676
Y+IG ++ C +G+ V G TC+ SW+ + + + +
Sbjct: 695 TPFQRLYRIGESIELTCPKGFVVAGPSRYTCQG-NSWTPPISNSLTCEKDTLTKLKGHCQ 753
Query: 677 TLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLENGT 736
+ + E D ++ E LC+ + + + T
Sbjct: 754 LGQKQSGSECICMSPEEDCSHHSED----LCVFDTDSN------------------DYFT 791
Query: 737 WSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSY---TRTCTKRGT 793
+ + C ++ SC G++ + RL + TC
Sbjct: 792 SPACKFLAEKCLNNQQLHFLHIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEK 851
Query: 794 WSGHIPTCKAI---DCSHPGS 811
S C + C G+
Sbjct: 852 CSASTSKCVCLLPPQCFKGGN 872
Score = 55.7 bits (133), Expect = 6e-08
Identities = 45/324 (13%), Positives = 80/324 (24%), Gaps = 46/324 (14%)
Query: 374 EHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCLFDWCAEPPQI 433
+ G E + N G+ + K C +P
Sbjct: 574 QRGGKRCEGEKRQEEDCTFSIMENN----GQPCINDDEEMKEVDLPEIEADSGCPQPVPP 629
Query: 434 SGGIVTTSGRR--TGSVATYSCEPGFILFGSN-----------------VNIDCGRLTAI 474
G + + G SC GF G +C +
Sbjct: 630 ENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQRTECIKPVVQ 689
Query: 475 PYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEGKATKDIKVC 534
+I+ +G + +C + + + G R +C + W+ C
Sbjct: 690 EVLTITPFQRLYRIGESIELTCPKGFVVAGPSRYTCQGNS-WTPPISNS--------LTC 740
Query: 535 SNVAVDR-REIRCPEPTLPAHSILSVTGN-DRLYGRTLIKTADSASSVATYKIGALPTLP 592
+ + + + ++ D + + D+ S+ T P
Sbjct: 741 EKDTLTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYF-------TSP 793
Query: 593 AHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGS 652
A L+ + L S + G K E TC D
Sbjct: 794 ACKFLAEKCLNNQQLHFL--HIGSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEK 851
Query: 653 WSGSVPECIYVDCGNPETVPNGGF 676
S S +C+ C P GG
Sbjct: 852 CSASTSKCV---CLLPPQCFKGGN 872
Score = 54.1 bits (129), Expect = 2e-07
Identities = 50/435 (11%), Positives = 94/435 (21%), Gaps = 83/435 (19%)
Query: 358 ESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNG 417
+ Y C +G TL T + + + DG
Sbjct: 491 QEYAAKFDPCQCAPCPNNGRPTLSGTECLCVCQSGTYGENCEKQSPDYKSNAVDGQWGCW 550
Query: 418 TEPQCLFDWCAE--------PPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNID-- 467
+ P GG +R T+S N + +
Sbjct: 551 SSWSTCDATYKRSRTRECNNPAPQRGGKRCEGEKRQEEDCTFSIMENNGQPCINDDEEMK 610
Query: 468 ------------CGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKV 515
C + G I + +G +V SC + VG+ CL
Sbjct: 611 EVDLPEIEADSGCPQPVPPENGFIRNEKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGT 670
Query: 516 WSDTAPKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTAD 575
W +C + C +P + ++
Sbjct: 671 WRQGDVEC------------------QRTECIKPVVQEVLTITPFQR------------- 699
Query: 576 SASSVATYKIGALPTLPAHSILSVTGNDRLYG-------------------RTLIKTADS 616
Y+IG L V G R T +K
Sbjct: 700 ------LYRIGESIELTCPKGFVVAGPSRYTCQGNSWTPPISNSLTCEKDTLTKLKGHCQ 753
Query: 617 ASSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPETV--PNG 674
+ + + + E + + ++ + + C N + + +
Sbjct: 754 LGQKQSGSECICMSPEEDCSHHSEDLCVFDTDSNDYFTSPACKFLAEKCLNNQQLHFLHI 813
Query: 675 GFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCLEN 734
G +G + + E C + S+ C C +
Sbjct: 814 GSCQDGRQLEWGLERTRLSSNSTKKESCGYDTCYDWEKCSASTSKCVCLLP---PQCFKG 870
Query: 735 GTWSSGLPTCKGCKT 749
G +
Sbjct: 871 GNQLYCVKMGSSTSE 885
Score = 53.3 bits (127), Expect = 3e-07
Identities = 40/295 (13%), Positives = 66/295 (22%), Gaps = 46/295 (15%)
Query: 235 GKDQPNNYNGEQNCVVLDGGRGWL-WNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVG 293
GK E++C + ++ + + C P N
Sbjct: 577 GKRCEGEKRQEEDCTFSIMENNGQPCINDDEEMKEVDLPEIEADSGCPQPVPPENGFIRN 636
Query: 294 TVSTKL-GSTISYACPEGNMLVGSATRTC-KEGFWTGVAPTCQYFQLQPMDVPNLVLYLF 351
L G + +C G VG C +G W CQ
Sbjct: 637 EKQLYLVGEDVEISCLTGFETVGYQYFRCLPDGTWRQGDVECQR---------------- 680
Query: 352 LSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGD 411
+C K E T+T G C + + + G +R C
Sbjct: 681 -------------TECIKPVVQEVLTITPFQRLYRIGESIELTCPKGFVVAGPSRYTCQG 727
Query: 412 GGKWNGTEPQCLFDWCAEPPQISGGIVT--TSGRRTGSVATYSCEPGFILFGSNVNIDCG 469
W L ++ G + + V D
Sbjct: 728 -NSWTPPISNSLTCEKDTLTKLKGHCQLGQKQSGSECICMSPEEDCSHHSEDLCV-FDTD 785
Query: 470 RLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCE 524
+ +L E C N +L SC + + +
Sbjct: 786 SNDYFTSPACKFLAEK----------CLNNQQLHFLHIGSCQDGRQLEWGLERTR 830
>1egg_A Macrophage mannose receptor; C-type lectin, sugar binding protein;
2.30A {Homo sapiens} SCOP: d.169.1.1 PDB: 1egi_A
Length = 147
Score = 79.4 bits (196), Expect = 1e-17
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
W+G + + W DG V+ +W +PNNY + C L G WND+ C+
Sbjct: 72 FWLGLT-YGS-PSEGFTWSDGSPVSYENWAYGEPNNYQNVEYCGELKGDPTMSWNDINCE 129
Query: 266 LDYLHWICQHNPANCGSPD 284
+WICQ PD
Sbjct: 130 -HLNNWICQIQKGQTPKPD 147
>2h2t_B Low affinity immunoglobulin epsilon FC receptor ( IGE receptor)
(FC-epsilon-RII)...; C-type lectin, calcium-bound,
lectin domain; 1.30A {Homo sapiens} PDB: 2h2r_A 1t8c_A
1t8d_A
Length = 175
Score = 78.7 bits (194), Expect = 5e-17
Identities = 27/113 (23%), Positives = 42/113 (37%), Gaps = 13/113 (11%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
R WIG + + + WVDG V +W +P + + ++CV++ G
Sbjct: 65 TKRASHTGSWIGLR-NLD-LKGEFIWVDGSHVDYSNWAPGEPTSRSQSEDCVMMRG--SG 120
Query: 258 LWNDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEG 310
WND C W+C A C P + +G S P+G
Sbjct: 121 RWNDAFCDRKLGAWVCDR-LATCTPPASEGSAESMGPDSRP--------DPDG 164
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold,
antibody, immune system; NMR {Homo sapiens}
Length = 376
Score = 80.8 bits (198), Expect = 3e-16
Identities = 35/218 (16%), Positives = 63/218 (28%), Gaps = 27/218 (12%)
Query: 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCL----ENGTWSSGLP 718
+ CG+P + NG + S GT + Y C +RL G LC+ +GTW P
Sbjct: 2 ISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAP 61
Query: 719 TCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQN 778
C+ ++ C E S+T +C + G
Sbjct: 62 KCEYFNKYSS--CPEPIVPGGYKIRGSTPYRHGDSVT---FACKTN---FSMNG------ 107
Query: 779 TQKVSYTRTCTKRGTWSG-HIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQ 837
+ + C W +PTC ++ G + + + +
Sbjct: 108 ----NKSVWCQANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTV 163
Query: 838 YQRIG----PYLRKCMEDGSWSGDEPRCEKRFNSGIPG 871
+ P K + + + + P
Sbjct: 164 PEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPE 201
Score = 73.8 bits (180), Expect = 6e-14
Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 364 NVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVC----GDGGKWNGTE 419
++ CG I +G ++ +T G V Y+C + LIGE +C G W+
Sbjct: 1 DISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60
Query: 420 PQCL----FDWCAEPPQISGGIVTTSG-RRTGSVATYSCEPGFILFGSNV 464
P+C + C EP G + S R G T++C+ F + G+
Sbjct: 61 PKCEYFNKYSSCPEPIVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKS 110
Score = 61.9 bits (149), Expect = 4e-10
Identities = 34/162 (20%), Positives = 51/162 (31%), Gaps = 33/162 (20%)
Query: 279 NCGSPDRHVNTTFVGT-VSTKLGSTISYACPEGNMLVGSATRTCKE-----GFWTGVAPT 332
+CGSP +N +G+ I Y+C L+G + C G W AP
Sbjct: 3 SCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPAPK 62
Query: 333 CQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAI 392
C+YF C + + G +T HG
Sbjct: 63 CEYFNKY-------------------------SSCPEPI-VPGGYKIRGSTPYRHGDSVT 96
Query: 393 YACHENYTLIGETRRVCGDGGKWNGTE-PQCLFDWCAEPPQI 433
+AC N+++ G C W T P C+ + E
Sbjct: 97 FACKTNFSMNGNKSVWCQANNMWGPTRLPTCVSVFPLEGSIE 138
Score = 59.2 bits (142), Expect = 3e-09
Identities = 28/98 (28%), Positives = 38/98 (38%), Gaps = 18/98 (18%)
Query: 465 NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESK----VWSDTA 520
+I CG I G ISY + +G+ + YSCS +RL+G C+ W A
Sbjct: 1 DISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTWDKPA 60
Query: 521 PKCEGKATKDIKVCSNVAVDRREIRCPEPTLPAHSILS 558
PKCE CPEP +P +
Sbjct: 61 PKCEYFNKY--------------SSCPEPIVPGGYKIR 84
Score = 44.2 bits (103), Expect = 2e-04
Identities = 31/286 (10%), Positives = 58/286 (20%), Gaps = 41/286 (14%)
Query: 543 EIRCPEPTLPAHSILSVTGND---------------RLYGRTLIKTADSASSVATYKIGA 587
+I C P + +S RL G + T+
Sbjct: 1 DISCGSPPPILNGRISYYSTPIAVGTVIRYSCSGTFRLIGEKSLLCITKDKVDGTW-DKP 59
Query: 588 LPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVKYRCERGYKVEGEPLSTC 647
P + S ++ Y+ G V + C+ + + G C
Sbjct: 60 APKCEYFNKYSSCPEP------IVPGGYKIRGSTPYRHGDSVTFACKTNFSMNGNKSVWC 113
Query: 648 EDTGSWSGS-VPECIYVDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRL 706
+ W + +P C+ V GG L
Sbjct: 114 QANNMWGPTRLPTCVSVFPLEGSIEGRGGSELADPEVPRDCGCKPCICTVP--------- 164
Query: 707 CLENGTWSSGLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKR 766
+ P + + + R
Sbjct: 165 ---EVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPR 221
Query: 767 FYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSI 812
FR + + + +G C+ + P I
Sbjct: 222 EEQFNSTFRSVSELPIMHQD------WLNGKEFKCRVNSAAFPAPI 261
>1byf_A TC14, protein (polyandrocarpa lectin); C-type lectin,
galactose-specific, sugar binding protein; 2.00A
{Polyandrocarpa misakiensis} SCOP: d.169.1.1 PDB:
1tlg_A*
Length = 125
Score = 74.0 bits (182), Expect = 6e-16
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKP--SWGKDQPNNYNGEQNCVVLDGGRGWLWNDVG 263
W+GA + A + W DG + W ++P+N Q CV + L +DVG
Sbjct: 53 YWVGAD-NLQDGAYNFLWNDGVSLPTDSDLWSPNEPSNPQSWQLCVQIWSKYN-LLDDVG 110
Query: 264 CKLDYLHWICQHNPAN 279
C IC+ +
Sbjct: 111 CG-GARRVICEKELDD 125
>3kqg_A Langerin, C-type lectin domain family 4 member K; trimer, NECK and
CRD, coiled coil, immune system; 2.30A {Homo sapiens}
Length = 182
Score = 73.7 bits (181), Expect = 3e-15
Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPS----WGKDQPNNYNGEQNCVVLDGGRGWLWND 261
WIG G W WVD K W +PNN ++C + WND
Sbjct: 105 YWIGLT-KAG-MEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWND 162
Query: 262 VGCKLDYLHWICQHNPANCG 281
C +IC+
Sbjct: 163 APCD-KTFLFICKRPYVPSE 181
>1wmz_A Lectin CEL-I, N-acetyl-D-galactosamine-specific C-type; C-type
lectin, N-acetylgalactosamine, invertebrate, sugar
binding protein; HET: NGA A2G; 1.70A {Cucumaria
echinata} SCOP: d.169.1.1 PDB: 1wmy_A*
Length = 140
Score = 72.1 bits (177), Expect = 4e-15
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 3/69 (4%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
+WIG D + W DG V W QP+N+N ++ G WND
Sbjct: 71 LWIGLY-DKY-NEGDFIWTDGSKVGYTKWAGGQPDNWNNAEDYGQFRHTEGGAWNDNSAA 128
Query: 266 LDYLHWICQ 274
++C+
Sbjct: 129 AQA-KYMCK 136
>2yby_A Complement factor H; immune system, complement regulation, innate
immunity, infec; 1.58A {Mus musculus}
Length = 124
Score = 71.4 bits (175), Expect = 4e-15
Identities = 26/102 (25%), Positives = 34/102 (33%), Gaps = 10/102 (9%)
Query: 623 YKIGALVKYRCERGYKVE---GEPLSTCEDTGSWSGSVPECIYVDCGNPETVPNGGFTLT 679
IG Y+C+ G+ C G W C+ C V NG
Sbjct: 27 VSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEPE-VPCV-RKCVFHY-VENGDSAYW 82
Query: 680 SNATYYGTAVLYECDENYRLE-GHARRLCLENGTWSSGLPTC 720
G ++ +C Y L+ G C ENG WS P C
Sbjct: 83 EKVYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WSP-PPKC 122
Score = 56.8 bits (137), Expect = 7e-10
Identities = 17/107 (15%), Positives = 29/107 (27%), Gaps = 14/107 (13%)
Query: 372 HIEHGTVTLETTRTTH-----GAVAIYACHENYTL---IGETRRVCGDGGKWNGTEPQCL 423
++G + E + + G Y C ++ C G W E C+
Sbjct: 9 QFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQG-WEP-EVPCV 66
Query: 424 FDWCAEPPQISGGIVTTSGR--RTGSVATYSCEPGFILFGSNVNIDC 468
C + G + G C G+ L + C
Sbjct: 67 -RKC-VFHYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQNGQDTMTC 111
Score = 53.0 bits (127), Expect = 2e-08
Identities = 18/82 (21%), Positives = 28/82 (34%), Gaps = 7/82 (8%)
Query: 783 SYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI- 841
CT +G W C C ++NG + +++ C Y
Sbjct: 49 WDYLRCTAQG-WEP-EVPCVRK-CVFHY-VENGDSAYWEKVYVQGQSLKVQCYNGYSLQN 104
Query: 842 GPYLRKCMEDGSWSGDEPRCEK 863
G C E+G WS P+C +
Sbjct: 105 GQDTMTCTENG-WS-PPPKCIR 124
Score = 50.3 bits (120), Expect = 1e-07
Identities = 25/120 (20%), Positives = 36/120 (30%), Gaps = 26/120 (21%)
Query: 429 EPPQISGGIVTTSGRRT-------GSVATYSCEPGFILFG--SNVNIDCGR--------- 470
E PQ G + G+ +Y C+ GF S + C
Sbjct: 6 EFPQFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQGWEPEVPC 65
Query: 471 -----LTAIPYGSISYLNETTYLGSEVLYSCSRNYRLV-GHPRRSCLESKVWSDTAPKCE 524
+ G +Y + G + C Y L G +C E+ WS PKC
Sbjct: 66 VRKCVFHYVENGDSAYWEKVYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WSPP-PKCI 123
Score = 49.9 bits (119), Expect = 2e-07
Identities = 23/153 (15%), Positives = 36/153 (23%), Gaps = 43/153 (28%)
Query: 280 CGSPD-----RHVNTTFVGTVSTKLGSTISYACPEG---NMLVGSATRTCKEGFWTGVAP 331
C P + + +G+ SY C G C W
Sbjct: 5 CEFPQFKYGRLYYEESLRPNFPVSIGNKYSYKCDNGFSPPSGYSWDYLRCTAQGWEP-EV 63
Query: 332 TCQYFQLQPMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVA 391
C C +E+G G
Sbjct: 64 PCV------------------------------RKCVFHY-VENGDSAYWEKVYVQGQSL 92
Query: 392 IYACHENYTLI-GETRRVCGDGGKWNGTEPQCL 423
C+ Y+L G+ C + G W+ P+C+
Sbjct: 93 KVQCYNGYSLQNGQDTMTCTENG-WS-PPPKCI 123
Score = 36.8 bits (85), Expect = 0.007
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 622 TYKIGALVKYRCERGYK-VEGEPLSTCEDTGSWSGSVPECI 661
Y G +K +C GY G+ TC + G WS P+CI
Sbjct: 85 VYVQGQSLKVQCYNGYSLQNGQDTMTCTENG-WS-PPPKCI 123
>3c22_A C-type lectin domain family 4 member K; coiled coil, glycoprotein,
membrane, signal-anchor, transmembrane, immune system,
sugar binding protein; 1.50A {Homo sapiens} PDB: 3p5g_A*
3p5d_A* 3p5f_A* 3p5e_A* 3p5h_A* 3p5i_A* 3p7g_A* 3p7f_A*
3p7h_A* 3bc7_A* 3bbs_A* 3bc6_A*
Length = 156
Score = 72.5 bits (178), Expect = 4e-15
Identities = 20/80 (25%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPS----WGKDQPNNYNGEQNCVVLDGGRGWLWND 261
WIG G W WVD K W +PNN ++C + WND
Sbjct: 79 YWIGLT-KAG-MEGDWSWVDDTPFNKVQSARFWIPGEPNNAGNNEHCGNIKAPSLQAWND 136
Query: 262 VGCKLDYLHWICQHNPANCG 281
C +IC+
Sbjct: 137 APCD-KTFLFICKRPYVPSE 155
>2py2_A Antifreeze protein type II; type II antifreeze protein; 1.70A
{Clupea harengus}
Length = 136
Score = 72.0 bits (177), Expect = 5e-15
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
WIG D + W W+D + W QP+ E C+ ++ G G WND C
Sbjct: 62 SWIGGT-DCQ-VSTRWFWMDSTSMDYADWCAAQPDTTLTE-CCIQMNVGIGKCWNDTPCT 118
Query: 266 LDYLHWICQHNPANC 280
IC +
Sbjct: 119 -HLHSSICAKPLKHH 132
>2afp_A Protein (SEA raven type II antifreeze protein); recombinant SEA
raven protein, solution backbone fold, C- type lectin;
NMR {Hemitripterus americanus} SCOP: d.169.1.1
Length = 129
Score = 71.6 bits (176), Expect = 5e-15
Identities = 18/75 (24%), Positives = 28/75 (37%), Gaps = 4/75 (5%)
Query: 200 RLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLW 259
L +VWIG A W W DG + SW +P++ C+ + W
Sbjct: 56 TLNAGVVWIGGS-ACL-QAGAWTWSDGTPMNFRSWCSTKPDDVLAA-CCMQMTAAADQCW 112
Query: 260 NDVGCKLDYLHWICQ 274
+D+ C +C
Sbjct: 113 DDLPCP-ASHKSVCA 126
>2yra_A Seizure 6-like protein isoform 3; disulfide bond, sushi domain,
SCR, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 74
Score = 69.4 bits (170), Expect = 6e-15
Identities = 16/59 (27%), Positives = 25/59 (42%)
Query: 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCK 721
C + + NG T + G + Y+CD Y + G C + +WSS P C+
Sbjct: 6 SGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCE 64
Score = 67.5 bits (165), Expect = 3e-14
Identities = 20/64 (31%), Positives = 26/64 (40%)
Query: 800 TCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDEP 859
+ + CS I NG + + + Y C P Y +G C D SWS D P
Sbjct: 2 SSGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPP 61
Query: 860 RCEK 863
CEK
Sbjct: 62 FCEK 65
Score = 64.0 bits (156), Expect = 5e-13
Identities = 17/67 (25%), Positives = 24/67 (35%)
Query: 364 NVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQCL 423
+ C L I++G T T GA Y C Y ++G C W+ P C
Sbjct: 5 SSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCE 64
Query: 424 FDWCAEP 430
+ P
Sbjct: 65 KTEESGP 71
Score = 60.9 bits (148), Expect = 7e-12
Identities = 18/64 (28%), Positives = 26/64 (40%)
Query: 461 GSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTA 520
GS+ + C L I G + + G+ + Y C Y +VG +C WS
Sbjct: 1 GSSGSSGCSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDP 60
Query: 521 PKCE 524
P CE
Sbjct: 61 PFCE 64
Score = 57.8 bits (140), Expect = 7e-11
Identities = 16/53 (30%), Positives = 24/53 (45%)
Query: 618 SSVATYKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPECIYVDCGNPET 670
+S GA + Y+C+ GY + G TC+ SWS P C + P +
Sbjct: 21 TSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCEKTEESGPSS 73
Score = 46.3 bits (110), Expect = 9e-07
Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 280 CGSPDRHVNTTFVGT-VSTKLGSTISYACPEGNMLVGSATRTCKE-GFWTGVAPTCQ 334
C N + G+ I+Y C G +VGS T TC+ W+ P C+
Sbjct: 8 CSDLPEIQNGWKTTSHTELVRGARITYQCDPGYDIVGSDTLTCQWDLSWSSDPPFCE 64
Score = 42.0 bits (99), Expect = 3e-05
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 785 TRTCTKRGTWSGHIPTCKAIDCSHPGS 811
T TC +WS P C+ + S P S
Sbjct: 47 TLTCQWDLSWSSDPPFCEKTEESGPSS 73
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular
protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2
g.18.1.1 g.18.1.1 PDB: 1q3x_A
Length = 403
Score = 76.0 bits (187), Expect = 1e-14
Identities = 32/116 (27%), Positives = 49/116 (42%), Gaps = 15/116 (12%)
Query: 621 ATYKIGALVKYRCERGYKVEGEPLS------TCEDTGSWSGSVPECIYVDCGNPETVPNG 674
A Y + CE GY++ L C+ GSW +P C VDCG P+ +P+G
Sbjct: 33 AKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSG 92
Query: 675 GFTLTS--NATYYGTAVLYECDENY--RLEGHARRLCLENGTWSSG-----LPTCK 721
+ T Y + Y C+E + + +C +G W+S LP C+
Sbjct: 93 RVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSKGEKSLPVCE 148
Score = 65.2 bits (159), Expect = 4e-11
Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 4/101 (3%)
Query: 783 SYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRV--IIMNQTTTYNSAVEYHCVPQYQR 840
S+T C K G+W +P C +DC P + +GRV I TTY + ++Y C +
Sbjct: 60 SFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYT 119
Query: 841 I--GPYLRKCMEDGSWSGDEPRCEKRFNSGIPGRSRRSPIN 879
+ C DG W+ + + G S R+
Sbjct: 120 MKVNDGKYVCEADGFWTSSKGEKSLPVCEPVCGLSARTTGG 160
Score = 47.4 bits (113), Expect = 1e-05
Identities = 21/122 (17%), Positives = 32/122 (26%), Gaps = 17/122 (13%)
Query: 353 SKLFRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETR------ 406
++ Y C +G V+ + C Y L+
Sbjct: 3 MTGWKIHYTSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFT 62
Query: 407 RVCGDGGKWNGTEPQCLFDWCAEPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNI 466
VC G W+ P C C P + G V Y PG + + +
Sbjct: 63 AVCQKDGSWDRPMPACSIVDCGPPDDLPSGRV-----------EYITGPGVTTYKAVIQY 111
Query: 467 DC 468
C
Sbjct: 112 SC 113
Score = 46.7 bits (111), Expect = 2e-05
Identities = 35/154 (22%), Positives = 51/154 (33%), Gaps = 45/154 (29%)
Query: 305 YACPEGNMLVGSATRTC-KEGFWTGVAPTCQYFQLQPMDVPNLVLYLFLSKLFRESYERL 363
Y +G++ + S T C K+G W P C
Sbjct: 49 YELLQGHLPLKSFTAVCQKDGSWDRPMPACSI---------------------------- 80
Query: 364 NVDCGKLEHIEHGTVTLETT--RTTHGAVAIYACHENY--TLIGETRRVCGDGGKWNGTE 419
VDCG + + G V T TT+ AV Y+C E + + + + VC G W ++
Sbjct: 81 -VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCEADGFWTSSK 139
Query: 420 -----PQCLFDWCAEPPQ-----ISGGIVTTSGR 443
P C C + I GG G
Sbjct: 140 GEKSLPVCEPV-CGLSARTTGGQIYGGQKAKPGD 172
Score = 46.7 bits (111), Expect = 2e-05
Identities = 28/166 (16%), Positives = 44/166 (26%), Gaps = 31/166 (18%)
Query: 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNE 724
C P PNG + + C+ Y L L
Sbjct: 17 CPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPL------------------ 58
Query: 725 GHARRLCLENGTWSSGLPTCKG--CKTPKKSLT-RPALSCLPGKRFYYHRGIFRLQNTQK 781
+C ++G+W +P C C P + R PG Y + + T
Sbjct: 59 KSFTAVCQKDGSWDRPMPACSIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFY 118
Query: 782 V----SYTRTCTKRGTWSGH-----IPTCKAIDCSHPGSIDNGRVI 818
C G W+ +P C+ C G++
Sbjct: 119 TMKVNDGKYVCEADGFWTSSKGEKSLPVCEP-VCGLSARTTGGQIY 163
Score = 41.7 bits (98), Expect = 8e-04
Identities = 16/69 (23%), Positives = 24/69 (34%), Gaps = 6/69 (8%)
Query: 800 TCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQ------RIGPYLRKCMEDGS 853
T A C +P + NG V + + C Y+ + + C +DGS
Sbjct: 11 TSTAHACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGS 70
Query: 854 WSGDEPRCE 862
W P C
Sbjct: 71 WDRPMPACS 79
Score = 38.2 bits (89), Expect = 0.011
Identities = 13/67 (19%), Positives = 17/67 (25%), Gaps = 6/67 (8%)
Query: 466 IDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVG------HPRRSCLESKVWSDT 519
C A P G +S + L C Y L+ C + W
Sbjct: 15 HACPYPMAPPNGHVSPVQAKYILKDSFSIFCETGYELLQGHLPLKSFTAVCQKDGSWDRP 74
Query: 520 APKCEGK 526
P C
Sbjct: 75 MPACSIV 81
>2zib_A Type II antifreeze protein; thermal hysteresis, lectin; 1.34A
{Brachyopsis rostratus}
Length = 133
Score = 70.1 bits (172), Expect = 2e-14
Identities = 19/69 (27%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
VWIG A W W DG V +W +PN+ + C+ + W+D+ C
Sbjct: 65 VWIGGS-ACK-VAGAWSWTDGTPVDYRTWCPTKPNDILSD-CCMQMTAAVDKCWDDLPCP 121
Query: 266 LDYLHWICQ 274
IC
Sbjct: 122 -ASHASICA 129
>2msb_A Mannose-binding protein-A; lectin; HET: BMA MAN; 1.70A {Rattus
rattus} SCOP: d.169.1.1 PDB: 1msb_A 1ytt_A*
Length = 115
Score = 69.2 bits (170), Expect = 2e-14
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
++G D T + +V G +T +W KD+PN++ ++CV + LWND+ C+
Sbjct: 49 AFLGIT-DEV-TEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTI--VDNGLWNDISCQ 104
Query: 266 LDYLHWICQ 274
+C+
Sbjct: 105 -ASHTAVCE 112
>3alu_A Lectin CEL-IV, C-type; C-type lectin, raffinose, sugar binding
protein; HET: RAF; 1.65A {Cucumaria echinata} PDB:
3als_A* 3alt_A*
Length = 157
Score = 69.9 bits (171), Expect = 3e-14
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
V+IG + T W DG V W +PNN + + W DV
Sbjct: 83 VYIGMK-VGS-TNSDQTWTDGSSVDYDGWVSGEPNNGPNSRGAIAAGDYSRGFWADVYSN 140
Query: 266 LDYLHWICQ 274
++ +ICQ
Sbjct: 141 NNF-KYICQ 148
>1rtm_1 Mannose-binding protein-A; lectin; 1.80A {Rattus norvegicus} SCOP:
d.169.1.1 h.1.1.1 PDB: 1kwu_A* 1kwv_A* 1kwt_A* 1kwx_A*
1kwy_A* 1kx1_A* 1kww_A 1kwz_A* 1kx0_A* 3kmb_1* 1kmb_1*
2kmb_1* 4kmb_1* 1afb_1* 1afa_1* 1afd_1 1bch_1* 1bcj_1*
1fif_A 1fih_A*
Length = 149
Score = 69.3 bits (170), Expect = 4e-14
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
++G D T + +V G +T +W KD+PN++ ++CV + LWND+ C+
Sbjct: 83 AFLGIT-DEV-TEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTI--VDNGLWNDISCQ 138
Query: 266 LDYLHWICQ 274
+C+
Sbjct: 139 -ASHTAVCE 146
>1rdl_1 SUB-MBP-C, mannose-binding protein-C; C-type lectin,
calcium-binding protein; HET: MMA; 1.70A {Rattus rattus}
SCOP: d.169.1.1 PDB: 1rdj_1* 1rdk_1* 1rdi_1* 1rdm_1*
1rdn_1* 1rdo_1 1bv4_A 1kza_1* 1kzb_1* 1kzc_1* 1kzd_1*
1kze_1*
Length = 113
Score = 68.1 bits (167), Expect = 6e-14
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 9/71 (12%)
Query: 206 VWIGA--QKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVG 263
++G Q+ ++ + G V +W + +PNN +NCVVL WNDV
Sbjct: 47 AFLGITDQRTEN----VFEDLTGNRVRYTNWNEGEPNNVGSGENCVVL--LTNGKWNDVP 100
Query: 264 CKLDYLHWICQ 274
C D +C+
Sbjct: 101 CS-DSFLVVCE 110
>1jzn_A Galactose-specific lectin; C-type lectin, protein-disaccharide
complex, sugar binding P; HET: BGC GAL; 2.20A {Crotalus
atrox} SCOP: d.169.1.1 PDB: 1muq_A*
Length = 135
Score = 68.6 bits (168), Expect = 6e-14
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
VWIG + D +W+W D +W K+QP++Y ++ CV L G+ WND C
Sbjct: 66 VWIGLR-DKK-KDFSWEWTDRSCTDYLTWDKNQPDHYQNKEFCVELVSLTGYRLWNDQVC 123
Query: 265 KLDYLHWICQ 274
+ ++CQ
Sbjct: 124 ESKD-AFLCQ 132
>1h8u_A MBP, eosinophil granule major basic protein 1; lectin, eosinophil
granule protein, EMBP; 1.8A {Homo sapiens} SCOP:
d.169.1.1 PDB: 2brs_A*
Length = 117
Score = 67.8 bits (166), Expect = 7e-14
Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
VWIG + R ++WVDG W QP + G +CV L G W C
Sbjct: 52 VWIGGRITGSGRCRRFQWVDGSRWNFAYWAAHQPWSRGG--HCVALCTRGG-YWRRAHCL 108
Query: 266 LDYLHWICQH 275
L +IC +
Sbjct: 109 -RRLPFICSY 117
>1hup_A Mannose-binding protein; alpha-helical coiled-coil, C-type lectin;
2.50A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Length = 141
Score = 68.5 bits (168), Expect = 7e-14
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 9/71 (12%)
Query: 206 VWIGA--QKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVG 263
++G +K G + + G +T +W + +PNN +++CV+L + WNDV
Sbjct: 75 AFLGITDEKTEG----QFVDLTGNRLTYTNWNEGEPNNAGSDEDCVLLL--KNGQWNDVP 128
Query: 264 CKLDYLHWICQ 274
C +C+
Sbjct: 129 CS-TSHLAVCE 138
>1buu_A Protein (mannose-binding protein A); lectin, HOST defense,
metalloprotein, sugar binding protein; 1.90A {Rattus
norvegicus} SCOP: d.169.1.1 h.1.1.1
Length = 168
Score = 69.4 bits (170), Expect = 7e-14
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
++G D T + +V G +T +W KD+PN++ ++CV + LWND+ C+
Sbjct: 102 AFLGIT-DEV-TEGQFMYVTGGRLTYSNWKKDEPNDHGSGEDCVTI--VDNGLWNDISCQ 157
Query: 266 LDYLHWICQ 274
+C+
Sbjct: 158 -ASHTAVCE 165
>1tdq_B Aggrecan core protein; extracellular matrix, lecticans, tenascins,
protein-protein interactions, C-type lectin domain;
2.60A {Rattus norvegicus} SCOP: d.169.1.1
Length = 130
Score = 67.0 bits (164), Expect = 2e-13
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNN-YNGEQNCVVLDGGRGWLWNDVGC 264
WIG D ++W DG + W +QP+N + ++CVV+ WNDV C
Sbjct: 62 QWIGLN-DRT-IEGDFRWSDGHSLQFEKWRPNQPDNFFATGEDCVVMIWHERGEWNDVPC 119
Query: 265 KLDYLHWICQ 274
L + C+
Sbjct: 120 N-YQLPFTCK 128
>2ls8_A C-type lectin domain family 4 member D; structural genomics, NEW
YORK structural genomics research consortium, nysgrc,
PSI-biology, immune system; NMR {Homo sapiens}
Length = 156
Score = 67.8 bits (166), Expect = 2e-13
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKP--SWGKDQPNNYNGEQNCVVL-DGGRGWLWNDV 262
++G + D W+WVD W K++P+N GE NCVVL W WNDV
Sbjct: 60 YFLGLR-DEN-AKGQWRWVDQTPFNPRRVFWHKNEPDNSQGE-NCVVLVYNQDKWAWNDV 116
Query: 263 GCKLDYLHWICQHNPANCGSPDRH 286
C IC+ + + +
Sbjct: 117 PCN-FEASRICKIPGTTLNAENLY 139
>1qdd_A Lithostathine; pancreatic stone inhibitor, metal binding protein;
HET: SIA NDG GAL; 1.30A {Homo sapiens} SCOP: d.169.1.1
PDB: 1lit_A
Length = 144
Score = 67.4 bits (165), Expect = 2e-13
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
VWIG DP R W W G +V+ SWG P++ N + W DV C+
Sbjct: 76 VWIGLH-DPK-KNRAWHWSSGSLVSYKSWGIGAPSSVNPGYCVSLTSSTGFQKWKDVPCE 133
Query: 266 LDYLHWICQ 274
D ++C+
Sbjct: 134 -DKFSFVCK 141
>2vuv_A Codakine; sugar-binding protein, C-type, lectin, mannose,
invertebrate; HET: CIT; 1.3A {Codakia orbicularis} PDB:
2vuz_A*
Length = 129
Score = 66.6 bits (163), Expect = 2e-13
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 193 ELERRKDRLKTLLVWIGAQKDPGITARTWKWVD-GEVVTKPSWGKDQPNNYNGEQNCVVL 251
+ + + W+G QK G W+W G WG ++PNN G ++C+
Sbjct: 51 HMCKENGDAGSFGPWLGGQKVGG----AWQWSSSGAAFDYLRWGPNEPNNSGGNEDCLHY 106
Query: 252 DGGRGWLWNDVGCKLDYLHWICQ 274
+ WND+ C ++CQ
Sbjct: 107 NWLS---WNDLRCHYQA-SYLCQ 125
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane
protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens}
SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Length = 157
Score = 67.1 bits (164), Expect = 3e-13
Identities = 28/136 (20%), Positives = 41/136 (30%), Gaps = 35/136 (25%)
Query: 206 VWIGAQKDPGITARTWKWVDG---EVVTKPSWGKDQPNNYNGEQNCVVL---DGGRGWLW 259
WIG +K W WV +W +PNN +++CV + +W
Sbjct: 49 YWIGIRK----VNNVWVWVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMW 104
Query: 260 NDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATR 319
ND C +C S H C E + + T
Sbjct: 105 NDERCSKKK-LALCYTAACTNTSCSGHGE------------------CVET---INNYTC 142
Query: 320 TCKEGFWTGVAPTCQY 335
C GF +G C+
Sbjct: 143 KCDPGF-SG--LKCEQ 155
>1pwb_A SP-D, PSP-D, pulmonary surfactant-associated protein D; collectin,
C-type lectin, alpha-helical coiled coil, carbohydrate
recognition domain; HET: GLC; 1.40A {Homo sapiens} SCOP:
d.169.1.1 h.1.1.1 PDB: 1pw9_A* 3ikn_A* 3ikp_A* 3ikq_A*
3ikr_A* 2rie_A* 2ggx_A* 2ggu_A* 2ork_A* 2orj_A* 2ria_A*
2rib_A* 2ric_A* 2rid_A* 2os9_A* 3dbz_A 3g81_A* 3g83_A*
1b08_A 3g84_A* ...
Length = 177
Score = 67.5 bits (165), Expect = 5e-13
Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
++ D T + + GE + +W +PN+ G ++CV + WND C
Sbjct: 113 AFLSMT-DSK-TEGKFTYPTGESLVYSNWAPGEPNDDGGSEDCVEIFT--NGKWNDRACG 168
Query: 266 LDYLHWICQ 274
+ +C+
Sbjct: 169 -EKRLVVCE 176
>1wk1_A Hypothetical protein YK1067A12; lectin C-type domain, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Caenorhabditis elegans} SCOP:
d.169.1.1
Length = 150
Score = 66.0 bits (161), Expect = 7e-13
Identities = 19/88 (21%), Positives = 30/88 (34%), Gaps = 15/88 (17%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKP-------SWGKDQPNNYNGEQNCVVLDGGRG-- 256
WIG K+ + + W G+ + W +P+N CV DG G
Sbjct: 55 FWIGLFKN---SDGQFYWDRGQGINPDLLNQPITYWANGEPSNDPTR-QCVYFDGRSGDK 110
Query: 257 -WLWNDVGCKLDYLHWICQHNPANCGSP 283
+W C +ICQ + +
Sbjct: 111 SKVWTTDTCA-TPRPFICQKHRYDSDHK 137
>2xr6_A CD209 antigen; sugar binding protein, carbohydrate binding,
mannose; HET: MAN 07B; 1.35A {Homo sapiens} PDB: 1sl4_A*
2it6_A* 1k9i_A* 2xr5_A* 1sl5_A* 2it5_A* 1xph_A 1k9j_A*
Length = 170
Score = 66.4 bits (162), Expect = 1e-12
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKP---SWGKDQPNNYNGEQNCVVLDGGRGWLWNDV 262
W+G D TW+WVDG + W + +PNN E +C G WND
Sbjct: 80 TWMGLS-DLN-QEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEE-DCAEFSGNG---WNDD 133
Query: 263 GCKLDYLHWICQHNPANCGSPDRHVNT 289
C L WIC+ + A+ + +
Sbjct: 134 KCNLAK-FWICKKSAASSSRDEEQFLS 159
>1tn3_A Tetranectin; plasminogen binding, kringle 4, C-type lectin,
carbohydrate recognition domain; 2.00A {Homo sapiens}
SCOP: d.169.1.1 PDB: 1rjh_A 3l9j_C
Length = 137
Score = 64.7 bits (158), Expect = 1e-12
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKD---QPNNYNGEQNCVVLDGGRGWLWNDV 262
+W+G D TW + G + +W + QP+ E NC VL G W D
Sbjct: 66 IWLGLN-DMA-AEGTWVDMTGARIAYKNWETEITAQPDGGKTE-NCAVLSGAANGKWFDK 122
Query: 263 GCKLDYLHWICQ 274
C+ D L +ICQ
Sbjct: 123 RCR-DQLPYICQ 133
>2ox9_A Collectin placenta 1; C-type lectin, sugar binding protein; HET:
GAL NAG FUC; 1.95A {Mus musculus} PDB: 2ox8_A
Length = 140
Score = 64.3 bits (157), Expect = 2e-12
Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYN----GEQNCVVLDGGRGWLWND 261
WIG D WKW+DG V +W QP+N+ ++C L WND
Sbjct: 62 HWIGLT-DSE-QESEWKWLDGSPVDYKNWKAGQPDNWGSGHGPGEDCAGLI--YAGQWND 117
Query: 262 VGCKLDYLHWICQHNPANCGSP 283
C ++IC+ S
Sbjct: 118 FQCDEIN-NFICEKEREAVPSS 138
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity,
modular structure, serine protease; HET: NAG FUC MAN;
2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Length = 399
Score = 68.7 bits (168), Expect = 2e-12
Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 19/145 (13%)
Query: 621 ATYKIGALVKYRCERGYK-VEGEP-----LSTCEDTGSWSGSVPECIYVDCGNPETVPNG 674
Y+ C++GY+ +EG + C+D G+W ++P C DCG P +PNG
Sbjct: 20 PQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNG 79
Query: 675 GFTLTS--NATYYGTAVLYECDENYRLEGHARRLCLENGTWSSGLPTCKGNEGHARRLCL 732
F T+ Y + Y C E Y + + + G+ TC
Sbjct: 80 DFRYTTTMGVNTYKARIQYYCHEPY----YKMQTRAGSRESEQGVYTCTAQG------IW 129
Query: 733 ENGTWSSGLPTCK-GCKTPKKSLTR 756
+N +P C C P + +
Sbjct: 130 KNEQKGEKIPRCLPVCGKPVNPVEQ 154
Score = 56.7 bits (137), Expect = 1e-08
Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 10/99 (10%)
Query: 760 SCLPGKRFYYHRGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHPGSIDNGRV-- 817
+C G Y N S+T C GTW +P CK DC P ++ NG
Sbjct: 31 TCKQG----YQ---LIEGNQVLHSFTAVCQDDGTWHRAMPRCKIKDCGQPRNLPNGDFRY 83
Query: 818 IIMNQTTTYNSAVEYHCV-PQYQRIGPYLRKCMEDGSWS 855
TY + ++Y+C P Y+ + E G ++
Sbjct: 84 TTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYT 122
Score = 49.0 bits (117), Expect = 5e-06
Identities = 32/170 (18%), Positives = 56/170 (32%), Gaps = 23/170 (13%)
Query: 663 VDCGNPETVPNGGFTLTSNATY-YGTAVLYECDENYRL------EGHARRLCLENGTWSS 715
+ C P+T+ Y + + C + Y+L +C ++GTW
Sbjct: 1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 60
Query: 716 GLPTCKGNEGHARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFR 775
+P CK + C + +G R C + +Y +
Sbjct: 61 AMPRCK------IKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYC--HEPYYKMQTRAG 112
Query: 776 LQNTQKVSYTRTCTKRGTWSG-----HIPTCKAIDCSHPGSIDNGRVIIM 820
+ +++ Y TCT +G W IP C C P + R I+
Sbjct: 113 SRESEQGVY--TCTAQGIWKNEQKGEKIPRCLP-VCGKPVNPVEQRQQII 159
Score = 39.8 bits (93), Expect = 0.003
Identities = 17/68 (25%), Positives = 26/68 (38%), Gaps = 7/68 (10%)
Query: 804 IDCSHPGSIDNGRVIIMNQTT-TYNSAVEYHCVPQYQRIG------PYLRKCMEDGSWSG 856
I C P ++D +I Q + C YQ I + C +DG+W
Sbjct: 1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 60
Query: 857 DEPRCEKR 864
PRC+ +
Sbjct: 61 AMPRCKIK 68
Score = 38.6 bits (90), Expect = 0.007
Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 11/104 (10%)
Query: 365 VDCGKLEHIEHGTVTL-ETTRTTHGAVAIYACHENYTLIGETR------RVCGDGGKWNG 417
+ C + + ++ T+ + I C + Y LI + VC D G W+
Sbjct: 1 IKCPQPKTLDEFTIIQNLQPQYQFRDYFIATCKQGYQLIEGNQVLHSFTAVCQDDGTWHR 60
Query: 418 TEPQCLFDWCAEPPQISGGIVT----TSGRRTGSVATYSCEPGF 457
P+C C +P + G + Y C +
Sbjct: 61 AMPRCKIKDCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPY 104
>1uv0_A Pancreatitis-associated protein 1; lectin, C-type, secreted,
inflammatory response, acute phase; 1.78A {Homo sapiens}
SCOP: d.169.1.1 PDB: 2go0_A
Length = 149
Score = 64.4 bits (157), Expect = 2e-12
Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
Query: 206 VWIG---AQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WND 261
VWIG + W+W +V+ +W ++ + +C L +L W D
Sbjct: 76 VWIGLHDPTQGTEPNGEGWEWSSSDVMNYFAWERNPSTISSPG-HCASLSRSTAFLRWKD 134
Query: 262 VGCKLDYLHWICQ 274
C L ++C+
Sbjct: 135 YNCN-VRLPYVCK 146
>3tvj_A Mannan-binding lectin serine protease 2 A chain; in vitro
evolution, specific inhibitor, allostery, hydrolase;
1.28A {Homo sapiens}
Length = 86
Score = 62.3 bits (151), Expect = 3e-12
Identities = 16/67 (23%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
Query: 800 TCKAIDCSHPGSIDNGRV--IIMNQTTTYNSAVEYHCVPQYQRI--GPYLRKCMEDGSWS 855
+ +DC P + +GRV I TTY + ++Y C + + C DG W+
Sbjct: 2 SMTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWT 61
Query: 856 GDEPRCE 862
+
Sbjct: 62 SSKGEKS 68
Score = 60.4 bits (146), Expect = 1e-11
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 9/71 (12%)
Query: 660 CIYVDCGNPETVPNGGFTLTS--NATYYGTAVLYECDENYR--LEGHARRLCLENGTWSS 715
VDCG P+ +P+G + T Y + Y C+E + + +C +G W+S
Sbjct: 3 MTIVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTS 62
Query: 716 G-----LPTCK 721
LP C+
Sbjct: 63 SKGEKSLPVCE 73
Score = 55.4 bits (133), Expect = 8e-10
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 365 VDCGKLEHIEHGTVTLETT--RTTHGAVAIYACHENY--TLIGETRRVCGDGGKWNGTE- 419
VDCG + + G V T TT+ AV Y+C E + + + + VC G W ++
Sbjct: 6 VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKG 65
Query: 420 ----PQCLFDWCAEPPQISGG 436
P C C + +GG
Sbjct: 66 EKSLPVCEPV-CGLSARTTGG 85
Score = 45.4 bits (107), Expect = 3e-06
Identities = 17/93 (18%), Positives = 29/93 (31%), Gaps = 18/93 (19%)
Query: 466 IDCGRLTAIPYGSISYL--NETTYLGSEVLYSCSRNYR--LVGHPRRSCLESKVWSDTAP 521
+DCG +P G + Y+ T + + YSC + V + C W+ +
Sbjct: 6 VDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKG 65
Query: 522 KCEGKATKDIKVCSNVAVDRREIRCPEPTLPAH 554
+ + VC V C
Sbjct: 66 EKS------LPVCEPV--------CGLSARTTG 84
Score = 42.3 bits (99), Expect = 3e-05
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 626 GALVKYRCERGYK--VEGEPLSTCEDTGSWSG-----SVPECIYVDCGNPETVPNG 674
A+++Y CE + + C+ G W+ S+P C V CG G
Sbjct: 31 KAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSKGEKSLPVCEPV-CGLSARTTGG 85
Score = 37.3 bits (86), Expect = 0.002
Identities = 19/69 (27%), Positives = 24/69 (34%), Gaps = 11/69 (15%)
Query: 277 PANCGSPDRHVN---TTFVGTVSTKLGSTISYACPEG--NMLVGSATRTCKE-GFWTG-- 328
+CG PD + G T + I Y+C E M V C GFWT
Sbjct: 5 IVDCGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVNDGKYVCDADGFWTSSK 64
Query: 329 ---VAPTCQ 334
P C+
Sbjct: 65 GEKSLPVCE 73
Score = 35.0 bits (80), Expect = 0.014
Identities = 8/37 (21%), Positives = 12/37 (32%), Gaps = 6/37 (16%)
Query: 785 TRTCTKRGTWSGH-----IPTCKAIDCSHPGSIDNGR 816
C G W+ +P C+ + C GR
Sbjct: 51 KYVCDADGFWTSSKGEKSLPVCEPV-CGLSARTTGGR 86
Score = 27.7 bits (61), Expect = 5.2
Identities = 13/41 (31%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 427 CAEPPQISGGIVT--TSGRRT--GSVATYSCEPGFILFGSN 463
C P + G V T T +V YSCE F N
Sbjct: 8 CGPPDDLPSGRVEYITGPGVTTYKAVIQYSCEETFYTMKVN 48
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein,
membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A
{Homo sapiens}
Length = 164
Score = 64.8 bits (158), Expect = 3e-12
Identities = 29/141 (20%), Positives = 42/141 (29%), Gaps = 35/141 (24%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPS---WGKDQPNNYNGEQNCVVL---DGGRGWLW 259
WIG +K W WV WG +PNN +++CV + W
Sbjct: 49 YWIGIRK----IGGIWTWVGTNKSLTEEAENWGDGEPNNKKNKEDCVEIYIKRNKDAGKW 104
Query: 260 NDVGCKLDYLHWICQHNPANCGSPDRHVNTTFVGTVSTKLGSTISYACPEGNMLVGSATR 319
ND C +C + C E + + T
Sbjct: 105 NDDACHKLK-AALCY-TASCQPWSCSGHGE-----------------CVEI---INNYTC 142
Query: 320 TCKEGFWTGVAPTCQYFQLQP 340
C G+ P CQ+ Q+ P
Sbjct: 143 NCDVGY---YGPQCQFVQVDP 160
>1htn_A Tetranectin; plasminogen binding, kringle 4, alpha-helical coiled
coil, C-type lectin, carbohydrate recognition domain;
2.80A {Homo sapiens} SCOP: d.169.1.1 h.1.1.1
Length = 182
Score = 65.2 bits (159), Expect = 3e-12
Identities = 23/72 (31%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKD---QPNNYNGEQNCVVLDGGRGWLWNDV 262
+W+G D TW + G + +W + QP+ E NC VL G W D
Sbjct: 111 IWLGLN-DMA-AEGTWVDMTGARIAYKNWETEITAQPDGGKTE-NCAVLSGAANGKWFDK 167
Query: 263 GCKLDYLHWICQ 274
C+ D L +ICQ
Sbjct: 168 RCR-DQLPYICQ 178
>2b6b_D CD209 antigen; cryo EM dengue CRD DC-SIGN, icosahedral virus,
virus-recepto; 25.00A {Homo sapiens} SCOP: d.169.1.1
Length = 175
Score = 64.9 bits (158), Expect = 3e-12
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKP---SWGKDQPNNYNGEQNCVVLDGGRGWLWNDV 262
W+G D TW+WVDG + W + +PNN E +C G WND
Sbjct: 85 TWMGLS-DLN-QEGTWQWVDGSPLLPSFKQYWNRGEPNNVGEE-DCAEFSGNG---WNDD 138
Query: 263 GCKLDYLHWICQHNPANCGSPDR 285
C L WIC+ + A+C +
Sbjct: 139 KCNLAK-FWICKKSAASCSRDEE 160
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system,
membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo
sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A*
1fsb_A
Length = 162
Score = 64.4 bits (157), Expect = 3e-12
Identities = 21/87 (24%), Positives = 31/87 (35%), Gaps = 11/87 (12%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPS---WGKDQPNNYNGEQNCVVL---DGGRGWLW 259
WIG +K +TW WV + W ++PNN ++CV + W
Sbjct: 49 YWIGIRK----NNKTWTWVGTKKALTNEAENWADNEPNNKRNNEDCVEIYIKSPSAPGKW 104
Query: 260 NDVGCKLDYLHWICQHNPANCGSPDRH 286
ND C H +C S +
Sbjct: 105 NDEHCL-KKKHALCYTASCQDMSCSKQ 130
>3pbf_A Pulmonary surfactant-associated protein A; collectin, carbohydrate
binding, lectin, mannose, sugar BIND protein; 1.80A
{Rattus norvegicus} PDB: 1r14_A* 1r13_A* 3paq_A* 3par_A
3pak_A
Length = 148
Score = 63.5 bits (155), Expect = 5e-12
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 206 VWIGA--QKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVG 263
V++G + PG + ++DG V+ +W +P E CV + WND G
Sbjct: 85 VYLGMIEDQTPG----DFHYLDGASVSYTNWYPGEPRGQGKE-KCVEMYTDG--TWNDRG 137
Query: 264 CKLDYLHWICQ 274
C Y +C+
Sbjct: 138 CL-QYRLAVCE 147
>2kv3_A Regenerating islet-derived protein 4; GISP, C-type lectin, REG IV,
disulfide bond, glycoPro lectin, secreted, sugar binding
protein; NMR {Homo sapiens}
Length = 131
Score = 62.8 bits (153), Expect = 6e-12
Identities = 18/81 (22%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDG-GRG 256
++ +WIG DP + W+W+DG + SW + G ++C +
Sbjct: 57 SGYQRSQSIWIGLH-DPQ-KRQQWQWIDGAMYLYRSW---SGKSMGGNKHCAEMSSNNNF 111
Query: 257 WLWNDVGCKLDYLHWICQHNP 277
W+ C H++C++ P
Sbjct: 112 LTWSSNECNKRQ-HFLCKYRP 131
>1sl6_A C-type lectin DC-signr; sugar binding protein; HET: GAL NDG FUC;
2.25A {Homo sapiens} SCOP: d.169.1.1 PDB: 1xar_A
Length = 184
Score = 64.1 bits (156), Expect = 7e-12
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPS---WGKDQPNNYNGEQNCVVLDGGRGWLWNDV 262
W+G D TW+WVDG ++ W +PNN E +C G WND
Sbjct: 111 SWMGLS-DLN-QEGTWQWVDGSPLSPSFQRYWNSGEPNNSGNE-DCAEFSGSG---WNDN 164
Query: 263 GCKLDYLHWICQHNPANCGSPD 284
C +D +WIC+ PA C +
Sbjct: 165 RCDVDN-YWICK-KPAACFRDE 184
>1gz2_A Ovocleidin-17, OC-17 ovocleidin; structural protein, CTLD, eggshell
structural protein, phosphoprotein, sugar-binding
protein, glycoprotein; HET: SEP; 1.5A {Gallus gallus}
SCOP: d.169.1.1
Length = 142
Score = 61.8 bits (150), Expect = 2e-11
Identities = 18/70 (25%), Positives = 26/70 (37%), Gaps = 6/70 (8%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
VWIG P +R+W+W DG SW + G C L + W C
Sbjct: 75 VWIGLH-RPA-GSRSWRWSDGTAPRFASWHRTAKARRGG--RCAALRDEEAFTSWAARPC 130
Query: 265 KLDYLHWICQ 274
++C+
Sbjct: 131 TERN-AFVCK 139
>2e3x_B Coagulation factor X-activating enzyme light CHAI; disintegrin,
metalloproteinase, C-type lectin, hydrolase, BL
clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia
russellii siamensis}
Length = 134
Score = 59.4 bits (144), Expect = 9e-11
Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
WIG + +W DG V+ GK + C VL+ G+ W + C
Sbjct: 67 FWIGLMIKDKEQECSSEWSDGSSVSYDKLGKQEFR------KCFVLEKESGYRMWFNRNC 120
Query: 265 KLDYLHWICQHNP 277
+ Y ++C+ P
Sbjct: 121 EERY-LFVCKVPP 132
>3ubu_A Agglucetin subunit alpha-1; platelet inhibiting, agkisacucetin,
dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding;
1.91A {Deinagkistrodon acutus}
Length = 131
Score = 58.6 bits (142), Expect = 2e-10
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 8/81 (9%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
+ +T VW+G + + +W DG V+ ++ + Q C VL+ G+
Sbjct: 58 SENKQTDNVWLGLKIQSKGQQCSTEWTDGSSVSYENFSEYQSK------KCFVLEKNTGF 111
Query: 258 L-WNDVGCKLDYLHWICQHNP 277
W ++ C ++C+ P
Sbjct: 112 RTWLNLNCG-SEYSFVCKSPP 131
>1dv8_A Asialoglycoprotein receptor 1; C-type lectin CRD, signaling
protein; 2.30A {Homo sapiens} SCOP: d.169.1.1
Length = 128
Score = 57.8 bits (140), Expect = 3e-10
Identities = 22/95 (23%), Positives = 39/95 (41%), Gaps = 14/95 (14%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKP--SWGKDQPNNY-- 242
+ T+ E + + + + W+G WKWVDG +W +QP+++
Sbjct: 38 VVTSWEEQKFVQHHIGPVNTWMGLHD----QNGPWKWVDGTDYETGFKNWRPEQPDDWYG 93
Query: 243 ---NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQ 274
G ++C WND C+ Y W+C+
Sbjct: 94 HGLGGGEDCAHF--TDDGRWNDDVCQRPY-RWVCE 125
>1ukm_A EMS16 A chain, EMS16 subunit A; domain swapping, C-type lectin,
toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP:
d.169.1.1 PDB: 1v7p_A*
Length = 134
Score = 57.8 bits (140), Expect = 3e-10
Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 6/69 (8%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
VWIG + +W DG + +W + + G WN++ C+
Sbjct: 68 VWIGLRDRREEQQCNPEWNDGSKIIYVNWKEGESKMCQGLTKWT-----NFHDWNNINCE 122
Query: 266 LDYLHWICQ 274
D ++C+
Sbjct: 123 -DLYPFVCK 130
>1fvu_A Botrocetin alpha chain; VON WILLBRAND factor modulator, C-type
lectin, metal- binding, loop exchanged dimer, toxin;
1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_B
1u0n_B 1u0o_A
Length = 133
Score = 57.1 bits (138), Expect = 6e-10
Identities = 14/73 (19%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
WIG + + + +W DG V+ + + C L+ G++ W ++ C
Sbjct: 67 AWIGLRVENKEKQCSSEWSDGSSVSYENVVERTVK------KCFALEKDLGFVLWINLYC 120
Query: 265 KLDYLHWICQHNP 277
++C+ P
Sbjct: 121 A-QKNPFVCKSPP 132
>3bx4_A Aggretin alpha chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB:
2vrp_A
Length = 136
Score = 56.3 bits (136), Expect = 1e-09
Identities = 12/84 (14%), Positives = 27/84 (32%), Gaps = 6/84 (7%)
Query: 194 LERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDG 253
+ ++ + VWIG + + +W DG V+ + +
Sbjct: 58 ISQKDELADEDYVWIGLRAQNKEQQCSSEWSDGSSVSYENLIDLHTKKCGALEKLT---- 113
Query: 254 GRGWLWNDVGCKLDYLHWICQHNP 277
W + C+ ++C+ P
Sbjct: 114 -GFRKWVNYYCE-QMHAFVCKLLP 135
>1j34_A Coagulation factor IX-binding protein A chain; magnesium ION,
calcium ION, GLA domain, protein binding/blood clotting
complex; HET: CGU; 1.55A {Trimeresurus flavoviridis}
SCOP: d.169.1.1 PDB: 1bj3_A* 1j35_A* 1x2t_A* 1x2w_A
1ixx_A 1y17_A 1wt9_A 1iod_A*
Length = 129
Score = 55.9 bits (135), Expect = 1e-09
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 8/70 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
VWIG + + +W DG V+ +W + + C+ L+ G+ W ++ C
Sbjct: 66 VWIGLRVQGKEKQCSSEWSDGSSVSYENWIEAESK------TCLGLEKETGFRKWVNIYC 119
Query: 265 KLDYLHWICQ 274
++C+
Sbjct: 120 G-QQNPFVCE 128
>1ypq_A Oxidised low density lipoprotein (lectin-like) receptor 1; oxidized
low density lipoprotein receptor, LOX-1, CTLD, C- type
lectin like domain; 1.40A {Homo sapiens} SCOP: d.169.1.1
PDB: 1ypu_A 1yxk_A 3vlg_A 1ypo_A 1yxj_A
Length = 135
Score = 55.9 bits (135), Expect = 2e-09
Identities = 13/71 (18%), Positives = 21/71 (29%), Gaps = 7/71 (9%)
Query: 207 WIGAQKDPGITARTWKWVDGEVVTKPSWG-KDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
W+G + + W W DG + + + + C + G C
Sbjct: 68 WMGLSRRN--PSYPWLWEDGSPLMPHLFRVRGAVSQTYPSGTCAYIQRGA---VYAENCI 122
Query: 266 LDYLHWICQHN 276
L ICQ
Sbjct: 123 LAA-FSICQKK 132
>3vpp_A C-type lectin domain family 9 member A; dendritic cell, C-type
lectin-like domain, membrane, immune; 1.64A {Homo
sapiens}
Length = 132
Score = 55.1 bits (133), Expect = 3e-09
Identities = 14/98 (14%), Positives = 30/98 (30%), Gaps = 12/98 (12%)
Query: 187 IFTTDGELERRKDRLKTLL----VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNY 242
+ E++ L+ + W+G +D + W W DG + ++
Sbjct: 41 QIESKEEMDFITGSLRKIKGSYDYWVGLSQDG--HSGRWLWQDGSSPSPGLLPAERSQ-- 96
Query: 243 NGEQNCVVLDGGRGWLWNDVGCKLDYLHWICQHNPANC 280
+ Q C + C ++IC+
Sbjct: 97 SANQVCGYVKSNS---LLSSNCDTWK-YFICEKYALRS 130
>2c6u_A CLEC1B protein; lectin, rhodocytin, aggretin, C-type lectin-like,
platelets, thrombosis; 1.6A {Homo sapiens}
Length = 122
Score = 54.7 bits (132), Expect = 3e-09
Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 8/69 (11%)
Query: 207 WIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKL 266
W+G + + WKW DG V+++ + + G NC G+ + C+
Sbjct: 59 WVGLSRQK--SNEVWKWEDGSVISENMFEFLEDG--KGNMNCAYFHNGK---MHPTFCEN 111
Query: 267 DYLHWICQH 275
+ + +C+
Sbjct: 112 KH-YLMCER 119
>1c3a_A Flavocetin-A: alpha subunit; C-type lectin-like domains, membrane
protein; 2.50A {Trimeresurus flavoviridis} SCOP:
d.169.1.1 PDB: 1v4l_A
Length = 135
Score = 54.8 bits (132), Expect = 4e-09
Identities = 16/76 (21%), Positives = 23/76 (30%), Gaps = 9/76 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGC 264
VWIG + +W D V + K C L G W +V C
Sbjct: 68 VWIGLRIQNKEQQCRSEWSDASSVNYENLVKQFSK------KCYALKKGTELRTWFNVYC 121
Query: 265 KLDYLHWICQHNPANC 280
+C++ C
Sbjct: 122 G-TENPEVCKY-TPEC 135
>3c8j_A Natural killer cell receptor LY49C; MHC, virus, immune system;
2.60A {Mus musculus} SCOP: d.169.1.1 PDB: 3c8k_D 1p4l_D
1ja3_A 1p1z_D
Length = 203
Score = 56.5 bits (136), Expect = 4e-09
Identities = 20/89 (22%), Positives = 31/89 (34%), Gaps = 9/89 (10%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
+ EL+ + + WIG D + W W+D K + N+
Sbjct: 117 KIEDEDELKFLQRHVIPGNYWIGLSYDK--KKKEWAWIDNGPSK--LDMKIKKMNFKSR- 171
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQH 275
CV L R D+ C + Y + IC
Sbjct: 172 GCVFLSKAR---IEDIDCNIPY-YCICGK 196
>1fvu_B Botrocetin beta chain; VON WILLBRAND factor modulator, C-type
lectin, metal- binding, loop exchanged dimer, toxin;
1.80A {Bothrops jararaca} SCOP: d.169.1.1 PDB: 1ijk_C
1u0n_C 1u0o_B
Length = 125
Score = 54.3 bits (131), Expect = 5e-09
Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 10/77 (12%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
+ LK +VWIG D ++W DG + E CV
Sbjct: 56 SEMLKGDVVWIGLS-DVW-NKCRFEWTDGMEFDYDDY------YLIAEYECVASKPTNN- 106
Query: 258 LWNDVGCKLDYLHWICQ 274
W + C + +++C+
Sbjct: 107 KWWIIPCT-RFKNFVCE 122
>1jwi_A Bitiscetin; domain swapping, C-type lectin, toxin; 2.00A {Bitis
arietans} SCOP: d.169.1.1 PDB: 1uex_A
Length = 131
Score = 54.3 bits (131), Expect = 5e-09
Identities = 14/69 (20%), Positives = 23/69 (33%), Gaps = 8/69 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
WIG + + + +W DG V + +P G W D+ C
Sbjct: 66 AWIGLRDESKTQQCSPQWTDGSSVVYENVD--EPTKCFGLDVH-----TEYRTWTDLPCG 118
Query: 266 LDYLHWICQ 274
+IC+
Sbjct: 119 EKN-PFICK 126
>3bdw_A Natural killer cells antigen CD94; NK cells, receptor,
glycoprotein, lectin, signal-A transmembrane, immune
system receptor; 2.50A {Homo sapiens} SCOP: d.169.1.1
PDB: 3cdg_J 1b6e_A 3cii_G
Length = 123
Score = 53.9 bits (130), Expect = 6e-09
Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 8/69 (11%)
Query: 207 WIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKL 266
WIG W W +G +++ + + N +NC+ D C+
Sbjct: 60 WIGLSYSE--EHTAWLWENGSALSQYLFPSFETFN---TKNCIAY--NPNGNALDESCED 112
Query: 267 DYLHWICQH 275
+IC+
Sbjct: 113 KN-RYICKQ 120
>2bpd_A Dectin-1; receptor, beta-glucan, fungal recognition, C-type
lectin-like domain, CTLD, carbohydrate; 1.5A {Mus
musculus} PDB: 2bph_A 2bpe_A 2cl8_A*
Length = 142
Score = 54.4 bits (131), Expect = 6e-09
Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 9/84 (10%)
Query: 194 LERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSW--GKDQPNNYNGEQNCVVL 251
+E + + WIG ++ + W W DG S+ P NCV +
Sbjct: 64 IESQTSSHRINAFWIGLSRNQ--SEGPWFWEDGSAFFPNSFQVRNAVPQESLLH-NCVWI 120
Query: 252 DGGRGWLWNDVGCKLDYLHWICQH 275
G + C + IC+
Sbjct: 121 HGSE---VYNQICNTSS-YSICEK 140
>3gpr_C Rhodocetin subunit gamma; disulfide bond, lectin, secreted, toxin,
cell adhesion; 3.20A {Calloselasma rhodostoma}
Length = 134
Score = 54.4 bits (131), Expect = 6e-09
Identities = 13/76 (17%), Positives = 25/76 (32%), Gaps = 9/76 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGC 264
VWIG + + +W + +W + C L G W+ C
Sbjct: 67 VWIGLRDRRKEQQCSSEWSMSASIIYVNWNTGESQ------MCQGLARWTGFRKWDYSDC 120
Query: 265 KLDYLHWICQHNPANC 280
+ ++C+ + C
Sbjct: 121 Q-AKNPFVCKF-SSEC 134
>3ff7_C Killer cell lectin-like receptor subfamily G member 1;
KLRG1-cadherin complex, calcium, cell adhesion, cell
junction, cell membrane; 1.80A {Homo sapiens}
Length = 112
Score = 52.8 bits (127), Expect = 1e-08
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 14/88 (15%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
+ T + E+ + L WIG + + W+W DG + ++ + Q
Sbjct: 38 VITDNQEMSLLQVFLSEAFSWIGLRNN-----SGWRWEDGSPLNFSRI-----SSNSFVQ 87
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQ 274
C ++ C++ HW+C+
Sbjct: 88 TCGAINKNG---LQASSCEVPL-HWVCK 111
>1jwi_B Platelet aggregation inducer; domain swapping, C-type lectin,
toxin; 2.00A {Bitis arietans} SCOP: d.169.1.1 PDB:
1uex_B
Length = 125
Score = 53.2 bits (128), Expect = 1e-08
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 12/77 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
++++ +LVWIG +W DG + + + E C V +
Sbjct: 58 LEKMRIVLVWIGLS-HFWRI-CPLRWTDGARLDYRAL--------SDEPICFVAESFHN- 106
Query: 258 LWNDVGCKLDYLHWICQ 274
W C ++C+
Sbjct: 107 KWIQWTCN-RKKSFVCK 122
>3ubu_B Agglucetin subunit beta-2; platelet inhibiting, agkisacucetin,
dimer, toxin, C-type LEC GPIB inhibitor, GPIB binding;
1.91A {Deinagkistrodon acutus}
Length = 126
Score = 52.8 bits (127), Expect = 1e-08
Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 11/77 (14%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
L L+W+G + +W DG + SW K C++
Sbjct: 58 YPILDLSLIWMGLS-NMW-NDCKREWSDGTKLDFKSWAKTSD--------CLIGKTDGDN 107
Query: 258 LWNDVGCKLDYLHWICQ 274
W ++ C +++C+
Sbjct: 108 QWLNMDCS-KKHYFVCK 123
>1umr_A Convulxin alpha, CVX alpha; lectin, C-type lectin, platelet,
sugar-binding protein, activator, snake venom; 2.40A
{Crotalus durissus terrificus} SCOP: d.169.1.1 PDB:
1uos_A
Length = 135
Score = 53.3 bits (128), Expect = 2e-08
Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 9/76 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
V IG + + KW DG V+ + C +L G+ W C
Sbjct: 68 VSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYIT------KCSLLKKETGFRKWFVASC 121
Query: 265 KLDYLHWICQHNPANC 280
+ ++C+ P C
Sbjct: 122 I-GKIPFVCKF-PPQC 135
>3ff9_A Killer cell lectin-like receptor subfamily G member 1; natural
killer cell receptor KLTG1, glycoprotein, membrane,
phosphoprotein, signal-anchor; 1.80A {Mus musculus} PDB:
3ff8_C
Length = 115
Score = 52.4 bits (126), Expect = 2e-08
Identities = 15/90 (16%), Positives = 28/90 (31%), Gaps = 15/90 (16%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
F + ++ + L WIG + G W+W G ++ + Q
Sbjct: 39 TFPDNQGVKLFGEYLGQDFYWIGLRNIDG-----WRWEGGPALSLRIL------TNSLIQ 87
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQHN 276
C + C++ WIC+
Sbjct: 88 RCGAIHRNG---LQASSCEVAL-QWICKKV 113
>1sb2_B Rhodocetin beta subunit; C-type lectin, domain swapping, toxin;
1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB:
3gpr_B
Length = 129
Score = 52.4 bits (126), Expect = 2e-08
Identities = 13/70 (18%), Positives = 24/70 (34%), Gaps = 14/70 (20%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGC 264
W G + R KW +G V+ + + C V+ G W C
Sbjct: 68 AWTGLTE------RNLKWTNGASVSYENLYEPYIR------KCFVVQPWEGKSKWYKADC 115
Query: 265 KLDYLHWICQ 274
+ + ++C+
Sbjct: 116 E-EKNAFLCK 124
>1oz7_B Echicetin B-chain; platelet aggregation, dimer, toxin; 2.40A {Echis
carinatus} SCOP: d.169.1.1
Length = 123
Score = 52.0 bits (125), Expect = 3e-08
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 12/77 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
LK LVWIG D W+W DG + +W + E++C +
Sbjct: 56 FPMLKNDLVWIGLT-DYWRD-CNWEWSDGAQLDYKAW--------DNERHCFIYKNTDN- 104
Query: 258 LWNDVGCKLDYLHWICQ 274
W C + ++C+
Sbjct: 105 QWTRRDCTWTF-SFVCK 120
>3m9z_A Killer cell lectin-like receptor subfamily B MEMB; C-type
lectin-like domain, domain swapping, disulfide bond,
transmembrane protein; 1.70A {Mus musculus} PDB: 3t3a_A
Length = 139
Score = 52.5 bits (126), Expect = 3e-08
Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 10/79 (12%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
WIG + WKW++G + + +C + G + C
Sbjct: 64 FWIGLRYTL--PDMNWKWINGSTLNSDVL---KITGDTENDSCAAISGDK---VTFESCN 115
Query: 266 LDYLHWICQHNPANCGSPD 284
D WICQ +
Sbjct: 116 SDN-RWICQK-ELYHETLS 132
>1j34_B Coagulation factor IX-binding protein B chain; magnesium ION,
calcium ION, GLA domain, protein binding/blood clotting
complex; HET: CGU; 1.55A {Trimeresurus flavoviridis}
SCOP: d.169.1.1 PDB: 1bj3_B 1ixx_B* 1j35_B* 1x2t_B*
1x2w_B 1wt9_B 1iod_B 1y17_B
Length = 123
Score = 51.6 bits (124), Expect = 4e-08
Identities = 10/69 (14%), Positives = 24/69 (34%), Gaps = 12/69 (17%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
W+G + W+W + ++ +W ++ CV W C+
Sbjct: 64 FWMGLS-NVW-NQCNWQWSNAAMLRYKAWAEESY--------CVYFKSTNN-KWRSRACR 112
Query: 266 LDYLHWICQ 274
+ ++C+
Sbjct: 113 MMA-QFVCE 120
>1sb2_A Rhodocetin alpha subunit; C-type lectin, domain swapping, toxin;
1.90A {Calloselasma rhodostoma} SCOP: d.169.1.1 PDB:
3gpr_A
Length = 133
Score = 51.7 bits (124), Expect = 4e-08
Identities = 12/70 (17%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWL-WNDVGC 264
WIG + + +W DG ++ + + + C ++D G W+ C
Sbjct: 66 SWIGLKIENKGQRSNLEWSDGSSISYENLYEPYM------EKCFLMDHQSGLPKWHTADC 119
Query: 265 KLDYLHWICQ 274
+ + ++C+
Sbjct: 120 E-EKNVFMCK 128
>2e3x_C Coagulation factor X-activating enzyme light CHAI; disintegrin,
metalloproteinase, C-type lectin, hydrolase, BL
clotting, toxin; HET: NAG MAN GM6; 2.91A {Daboia
russellii siamensis}
Length = 122
Score = 51.3 bits (123), Expect = 5e-08
Identities = 12/77 (15%), Positives = 24/77 (31%), Gaps = 12/77 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
+ L+ WIG + +W D V + E C+++
Sbjct: 57 SENLEYPATWIGLG-NMW-KDCRMEWSDRGNVKYKALA--------EESYCLIMITHEK- 105
Query: 258 LWNDVGCKLDYLHWICQ 274
+W + C +C+
Sbjct: 106 VWKSMTCNFIA-PVVCK 121
>2yhf_A C-type lectin domain family 5 member A; immune system; 1.90A {Homo
sapiens}
Length = 118
Score = 50.8 bits (122), Expect = 6e-08
Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 11/88 (12%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
I T +L+ +D +IG + W+W++ V N N
Sbjct: 39 IVNTPEKLKFLQDITDAEKYFIGLIYHR--EEKRWRWINNSVFNG------NVTNQNQNF 90
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQ 274
NC + + ++ C + Y IC+
Sbjct: 91 NCATIGLTKT--FDAASCDISY-RRICE 115
>3bx4_B Aggretin beta chain; toxin; 1.70A {Agkistrodon rhodostoma} PDB:
2vrp_B
Length = 146
Score = 51.7 bits (124), Expect = 6e-08
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 12/77 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
+ RLK LVW+G + W+W DG + ++ + C+ G
Sbjct: 79 RPRLKANLVWMGLS-NIWHG-CNWQWSDGARLN--------YKDWQEQSECLAFRGVHT- 127
Query: 258 LWNDVGCKLDYLHWICQ 274
W ++ C ++C+
Sbjct: 128 EWLNMDCS-STCSFVCK 143
>4aqb_A Mannan-binding lectin serine protease 1; blood clotting,
mannan-binding protein, complement, ficolins complement
pathway, mannose- binding lectin; HET: NAG BMA MAN;
4.20A {Homo sapiens}
Length = 361
Score = 54.6 bits (131), Expect = 7e-08
Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 6/66 (9%)
Query: 618 SSVATYKIGALVKYRCERGYKVEGEPL------STCEDTGSWSGSVPECIYVDCGNPETV 671
S A Y V C+ GYKV + + C G+WS +P C + +
Sbjct: 295 PSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIPTCKKNEIDLESEL 354
Query: 672 PNGGFT 677
+ T
Sbjct: 355 KSEQVT 360
Score = 48.1 bits (114), Expect = 7e-06
Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 6/90 (6%)
Query: 356 FRESYERLNVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLIGETRR------VC 409
+R SY +C +L+ HG + + + +C Y ++ + C
Sbjct: 271 WRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIEC 330
Query: 410 GDGGKWNGTEPQCLFDWCAEPPQISGGIVT 439
G W+ P C + ++ VT
Sbjct: 331 LKDGTWSNKIPTCKKNEIDLESELKSEQVT 360
Score = 47.3 bits (112), Expect = 1e-05
Identities = 21/87 (24%), Positives = 30/87 (34%), Gaps = 9/87 (10%)
Query: 731 CLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQKVSYTRTCTK 790
C E G K K +SC G + N + ++ C K
Sbjct: 282 CPELQPPVHGKIEPSQAKYFFKDQVL--VSCDTGYKV-------LKDNVEMDTFQIECLK 332
Query: 791 RGTWSGHIPTCKAIDCSHPGSIDNGRV 817
GTWS IPTCK + + + +V
Sbjct: 333 DGTWSNKIPTCKKNEIDLESELKSEQV 359
Score = 44.6 bits (105), Expect = 9e-05
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 665 CGNPETVPNGGFTLTSNATYYGTAVLYECDENYRLEGHARRL------CLENGTWSSGLP 718
C + +G + ++ VL CD Y++ + CL++GTWS+ +P
Sbjct: 282 CPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGTWSNKIP 341
Query: 719 TCK 721
TCK
Sbjct: 342 TCK 344
Score = 41.1 bits (96), Expect = 0.001
Identities = 13/79 (16%), Positives = 26/79 (32%), Gaps = 7/79 (8%)
Query: 800 TCKAIDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRIGPYLRK------CMEDGS 853
+C +G++ + V C Y+ + + C++DG+
Sbjct: 276 RAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIECLKDGT 335
Query: 854 WSGDEPRCEKRFNSGIPGR 872
WS P C+K +
Sbjct: 336 WSNKIPTCKKNE-IDLESE 353
Score = 38.8 bits (90), Expect = 0.006
Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 6/75 (8%)
Query: 456 GFILFGSNVNIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLVGHPRR------S 509
G+ L +C L +G I + +VL SC Y+++
Sbjct: 270 GWRLSYRAAGNECPELQPPVHGKIEPSQAKYFFKDQVLVSCDTGYKVLKDNVEMDTFQIE 329
Query: 510 CLESKVWSDTAPKCE 524
CL+ WS+ P C+
Sbjct: 330 CLKDGTWSNKIPTCK 344
>3hup_A Early activation antigen CD69; C-type lectin-like domain, disulfide
bond, glycoprotein, LEC membrane, phosphoprotein,
signal-anchor, transmembrane; 1.37A {Homo sapiens} PDB:
1e87_A 1e8i_A 3cck_A
Length = 130
Score = 51.3 bits (123), Expect = 7e-08
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
+ ++ ++ K W+G +K+PG WKW +G+ +W N G
Sbjct: 53 VIDSEKDMNFLKRYAGREEHWVGLKKEPG---HPWKWSNGKEFN--NW-----FNVTGSD 102
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQ 274
CV L + + C+ + +WIC
Sbjct: 103 KCVFLKNTE---VSSMECEKNL-YWICN 126
>1oz7_A Echicetin A-chain; platelet aggregation, dimer, toxin; 2.40A {Echis
carinatus} SCOP: d.169.1.1
Length = 131
Score = 50.6 bits (121), Expect = 1e-07
Identities = 11/70 (15%), Positives = 21/70 (30%), Gaps = 9/70 (12%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRG-WLWNDVGC 264
+W G + + +W DG C VL+ W C
Sbjct: 65 IWTGLSERSKEQHCSSRWSDGSFFRSYEIA-------IRYSECFVLEKQSVFRTWVATPC 117
Query: 265 KLDYLHWICQ 274
+ + ++C+
Sbjct: 118 ENTF-PFMCK 126
>3g8k_A Lectin-related NK cell receptor LY49L1; natural killer cell
receptor, immune system; 2.00A {Mus musculus} PDB:
1qo3_C 3cad_A
Length = 130
Score = 50.5 bits (121), Expect = 1e-07
Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 9/89 (10%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
+ EL+ K + + WIG D + W W++ +
Sbjct: 44 KIDNEDELKFLKLLVPSDSYWIGLSYDN--KKKDWAWINNGPSKLALN---TMKYNIRDG 98
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQH 275
C++L R ++ C + IC
Sbjct: 99 GCMLLSKTR---LDNDNCDKSF-ICICGK 123
>1umr_C Convulxin beta, CVX beta; lectin, C-type lectin, platelet,
sugar-binding protein, activator, snake venom; 2.40A
{Crotalus durissus terrificus} SCOP: d.169.1.1 PDB:
1uos_B
Length = 125
Score = 50.5 bits (121), Expect = 1e-07
Identities = 17/77 (22%), Positives = 26/77 (33%), Gaps = 12/77 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
LK+ WIGA + W+W DG W + E C++
Sbjct: 58 HQSLKSTFFWIGAN-NIW-NKCNWQWSDGTKPEYKEW--------HEEFECLISRTFDN- 106
Query: 258 LWNDVGCKLDYLHWICQ 274
W C Y ++C+
Sbjct: 107 QWLSAPCSDTY-SFVCK 122
>3g8l_A Lectin-related NK cell receptor LY49L1; natural killer cell
receptor, immune system; 2.50A {Mus musculus}
Length = 190
Score = 51.8 bits (124), Expect = 1e-07
Identities = 15/94 (15%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
+ EL+ K + + WIG D + W W++ +
Sbjct: 104 KIDNEDELKFLKLLVPSDSYWIGLSYDN--KKKDWAWINNGPSKLALN---TMKYNIRDG 158
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQHNPANC 280
C++L R ++ C + IC +
Sbjct: 159 GCMLLSKTR---LDNDNCDKSF-ICICGK-RLDK 187
>1c3a_B Flavocetin-A: beta subunit; C-type lectin-like domains, membrane
protein; 2.50A {Trimeresurus flavoviridis} SCOP:
d.169.1.1 PDB: 1v4l_B
Length = 125
Score = 50.5 bits (121), Expect = 1e-07
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 12/77 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGW 257
LK VWIG + T +W DG + +W +G +C+V
Sbjct: 58 FPILKYDFVWIGLS-NVW-NECTKEWSDGTKLDYKAW--------SGGSDCIVSKTTDN- 106
Query: 258 LWNDVGCKLDYLHWICQ 274
W + C Y + +C+
Sbjct: 107 QWLSMDCSSKY-YVVCK 122
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein;
hydrolase, family 89 glycoside hydrolase, family 32
carbohyd binding module; HET: MSE; 1.55A {Clostridium
perfringens}
Length = 149
Score = 51.0 bits (122), Expect = 1e-07
Identities = 16/85 (18%), Positives = 32/85 (37%), Gaps = 6/85 (7%)
Query: 7 SGKVVRSIHFISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPW 66
S +V ++ N+A++ T T + ++N DG T+ +E
Sbjct: 11 SSGLVPRGSHMASENLAMKDETKVEVTSNNSEANNLRDGNENTL------WVPGQEEEKS 64
Query: 67 WQVDLLRPYPIRIVRITTRGCCGHQ 91
DL + I + I ++G +
Sbjct: 65 VTFDLSKEKDISAIDIVSKGNSPLK 89
>3bdw_B NKG2-A/NKG2-B type II integral membrane protein; NK cells,
receptor, glycoprotein, lectin, signal-A transmembrane,
immune system receptor; 2.50A {Homo sapiens} PDB: 3cdg_K
3cii_H
Length = 120
Score = 50.1 bits (120), Expect = 1e-07
Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 11/69 (15%)
Query: 207 WIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKL 266
WIG ++ + W ++G KD N E NC VL R C
Sbjct: 62 WIGVFRNS--SHHPWVTMNGLAFK--HEIKDSDN---AELNCAVLQVNR---LKSAQCGS 111
Query: 267 DYLHWICQH 275
+ C+H
Sbjct: 112 SI-IYHCKH 119
>1hq8_A NKG2-D; homodimer, CIS-proline, apoptosis; 1.95A {Mus musculus}
SCOP: d.169.1.1 PDB: 1jsk_A 1kcg_A*
Length = 123
Score = 49.7 bits (119), Expect = 2e-07
Identities = 11/70 (15%), Positives = 20/70 (28%), Gaps = 9/70 (12%)
Query: 206 VWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCK 265
W+G + P +W+W DG ++ + V + C
Sbjct: 60 HWMGLVQIP--ANGSWQWEDGSSLSYNQLTLVEIPK---GSCAVYGSSFK---AYTEDCA 111
Query: 266 LDYLHWICQH 275
+IC
Sbjct: 112 NLN-TYICMK 120
>1fm5_A Early activation antigen CD69; C-type lectin-like domain, natural
killer cell receptor, lectin, C-type lectin, immune
system; 2.27A {Homo sapiens} SCOP: d.169.1.1
Length = 199
Score = 51.1 bits (122), Expect = 2e-07
Identities = 20/88 (22%), Positives = 36/88 (40%), Gaps = 14/88 (15%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
+ ++ ++ K W+G +K+PG WKW +G+ +W N G
Sbjct: 122 VIDSEKDMNFLKRYAGREEHWVGLKKEPG---HPWKWSNGKEFN--NW-----FNVTGSD 171
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQ 274
CV L + + C+ + +WIC
Sbjct: 172 KCVFLKNTE---VSSMECEKNL-YWICN 195
>1mpu_A NKG2-D type II integral membrane protein; C-type lectin-like
domain, immune system; 2.50A {Homo sapiens} SCOP:
d.169.1.1 PDB: 1hyr_B
Length = 138
Score = 49.4 bits (118), Expect = 3e-07
Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 9/69 (13%)
Query: 207 WIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVGCKL 266
W+G P T +W+W DG +++ + +C + C
Sbjct: 76 WMGLVHIP--TNGSWQWEDGSILSPNLLTIIEMQK----GDCALYASSFK--GYIENCST 127
Query: 267 DYLHWICQH 275
+IC
Sbjct: 128 PN-TYICMQ 135
>3gpr_D Rhodocetin subunit delta; disulfide bond, lectin, secreted, toxin,
cell adhesion; 3.20A {Calloselasma rhodostoma}
Length = 124
Score = 48.6 bits (116), Expect = 5e-07
Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 12/78 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDG-GRG 256
LK +W+G + A W+W D + W + C V+
Sbjct: 55 SQTLKYTSMWLGLN-NAW-AACKWEWSDDAKLDYKVWLR--------RAYCAVMVVKTDR 104
Query: 257 WLWNDVGCKLDYLHWICQ 274
W + GC+ + ++C+
Sbjct: 105 IFWYNRGCE-KTVSFLCK 121
>1ukm_B EMS16 B chain, EMS16 subunit B; domain swapping, C-type lectin,
toxin; HET: NAG; 1.90A {Echis multisquamatus} SCOP:
d.169.1.1 PDB: 1v7p_B*
Length = 128
Score = 48.2 bits (115), Expect = 8e-07
Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 12/78 (15%)
Query: 198 KDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDG-GRG 256
LK +WIG +P W+W D +W C V+
Sbjct: 55 SKALKFTSMWIGLN-NPWKD-CKWEWSDNARFDYKAW--------KRRPYCTVMVVKPDR 104
Query: 257 WLWNDVGCKLDYLHWICQ 274
W GC+ + ++C+
Sbjct: 105 IFWFTRGCE-KSVSFVCK 121
>3rs1_A C-type lectin domain family 2 member I; C-type lectin-like, ligand
of NK receptor, natural killer CE receptors, surface of
activated T lymphocytes; 1.94A {Mus musculus}
Length = 122
Score = 46.2 bits (110), Expect = 3e-06
Identities = 17/88 (19%), Positives = 25/88 (28%), Gaps = 13/88 (14%)
Query: 187 IFTTDGELERRKDRLKTLLVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQ 246
F + EL K WIG ++ WKW + + N G
Sbjct: 45 RFDNEEELIFLKRFKGDFDSWIGLHRESSE--HPWKWTNN--TEYNNM-----NPILGVG 95
Query: 247 NCVVLDGGRGWLWNDVGCKLDYLHWICQ 274
L R + ++ WIC
Sbjct: 96 RYAYLSSDR---ISSSRSYINR-MWICS 119
>1srz_A Gamma-aminobutyric acid type B receptor, subunit 1; GABA(B)
receptor, CIS-trans isomerization, CCP module, sushi
domain; NMR {Rattus norvegicus} SCOP: g.18.1.1 PDB:
1ss2_A
Length = 68
Score = 44.7 bits (105), Expect = 3e-06
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 659 ECIYVDCGNPETVPNGGFTLTSNAT--YYGTAVLYECDENYRLEGHARRLCLENGTWSSG 716
E + + + T+ NG LT G V + CD ++ L G +R +C G WS+
Sbjct: 3 EFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVC-SQGQWSTP 61
Query: 717 LPTCKGN 723
P C+ N
Sbjct: 62 KPHCQVN 68
Score = 40.9 bits (95), Expect = 7e-05
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 623 YKIGALVKYRCERGYKVEGEPLSTCEDTGSWSGSVPEC 660
GA V++RC+ + + G S C G WS P C
Sbjct: 29 ALDGARVEFRCDPDFHLVGSSRSVCSQ-GQWSTPKPHC 65
Score = 39.7 bits (92), Expect = 2e-04
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 300 GSTISYACPEGNMLVGSATRTCKEGFWTGVAPTCQ 334
G+ + + C LVGS+ C +G W+ P CQ
Sbjct: 32 GARVEFRCDPDFHLVGSSRSVCSQGQWSTPKPHCQ 66
Score = 37.0 bits (85), Expect = 0.001
Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 478 SISYLNETTYLGSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEG 525
++ + G+ V + C ++ LVG R C + + WS P C+
Sbjct: 21 FLTGGDLPALDGARVEFRCDPDFHLVGSSRSVCSQGQ-WSTPKPHCQV 67
Score = 35.1 bits (80), Expect = 0.008
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 387 HGAVAIYACHENYTLIGETRRVCGDGGKWNGTEPQC 422
GA + C ++ L+G +R VC G+W+ +P C
Sbjct: 31 DGARVEFRCDPDFHLVGSSRSVCSQ-GQWSTPKPHC 65
Score = 32.8 bits (74), Expect = 0.046
Identities = 15/64 (23%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 801 CKAIDCSHPGSIDNGRVIIMNQTTTY--NSAVEYHCVPQYQRIGPYLRKCMEDGSWSGDE 858
I +++NG+V + + VE+ C P + +G C G WS +
Sbjct: 4 FVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSVC-SQGQWSTPK 62
Query: 859 PRCE 862
P C+
Sbjct: 63 PHCQ 66
Score = 29.7 bits (66), Expect = 0.64
Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 5/56 (8%)
Query: 419 EPQCLFDWCAEPPQISGGIVTTSG----RRTGSVATYSCEPGFILFGSNVNIDCGR 470
E + + + G V +G G+ + C+P F L GS+ ++ C +
Sbjct: 1 EAEFVRICSKSYLTLENGKVFLTGGDLPALDGARVEFRCDPDFHLVGSSRSV-CSQ 55
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein;
hydrolase, family 32 carbohydrate-binding module; HET:
MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Length = 161
Score = 47.2 bits (112), Expect = 3e-06
Identities = 12/66 (18%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Query: 18 SGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPI 77
+ N+A + + S++ G P SN DG+L++ + +DL +
Sbjct: 25 NYVNIAENKNVSGSNSQSGNPLSNITDGDLSS-----LWISDNGAMPANATIDLEGNNFV 79
Query: 78 RIVRIT 83
+ +
Sbjct: 80 DFLELH 85
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR
sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo
sapiens} SCOP: b.47.1.2 g.18.1.1
Length = 333
Score = 47.1 bits (112), Expect = 2e-05
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 663 VDCGNPETVPNGGFTLTSNATYYGTAVLYECDENY---RLEGHARRLCLENGTWSSG--- 716
+DCG PE++ NG +T +G+ + Y C+E Y G C NG+W +
Sbjct: 2 LDCGIPESIENGKVE-DPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLG 60
Query: 717 --LPTC 720
LP C
Sbjct: 61 PELPKC 66
Score = 43.2 bits (102), Expect = 3e-04
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 9/68 (13%)
Query: 364 NVDCGKLEHIEHGTVTLETTRTTHGAVAIYACHENYTLI---GETRRVCGDGGKWNGTE- 419
++DCG E IE+G V + T G+V Y C E Y + G C G W
Sbjct: 1 DLDCGIPESIENGKVE-DPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVL 59
Query: 420 ----PQCL 423
P+C+
Sbjct: 60 GPELPKCV 67
Score = 40.5 bits (95), Expect = 0.002
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 9/67 (13%)
Query: 804 IDCSHPGSIDNGRVIIMNQTTTYNSAVEYHCVPQYQRI---GPYLRKCMEDGSWSG---- 856
+DC P SI+NG+V ++T + S + Y C Y + G C +GSW
Sbjct: 2 LDCGIPESIENGKV-EDPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLG 60
Query: 857 -DEPRCE 862
+ P+C
Sbjct: 61 PELPKCV 67
Score = 36.7 bits (85), Expect = 0.031
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 9/68 (13%)
Query: 465 NIDCGRLTAIPYGSISYLNETTYLGSEVLYSCSRNYRLV---GHPRRSCLESKVWSDTA- 520
++DCG +I G + T + GS + Y+C Y + G C + W +
Sbjct: 1 DLDCGIPESIENGKVEDPESTLF-GSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVL 59
Query: 521 ----PKCE 524
PKC
Sbjct: 60 GPELPKCV 67
Score = 31.6 bits (72), Expect = 1.1
Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 11/66 (16%)
Query: 616 SASSVATYKIGALVKYRCERGY---KVEGEPLSTCEDTGSWSGSV-----PECIYVDCGN 667
+ G++++Y CE Y + G C GSW V P+C+ V CG
Sbjct: 16 EDPESTLF--GSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPELPKCVPV-CGV 72
Query: 668 PETVPN 673
P
Sbjct: 73 PREPFE 78
Score = 29.7 bits (67), Expect = 4.8
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 427 CAEPPQISGGIVTTSGRRT-GSVATYSCEPGF 457
C P I G V GSV Y+CE +
Sbjct: 4 CGIPESIENGKVEDPESTLFGSVIRYTCEEPY 35
Score = 29.3 bits (66), Expect = 5.2
Identities = 19/65 (29%), Positives = 21/65 (32%), Gaps = 9/65 (13%)
Query: 279 NCGSPDRHVNTTFVGTVSTKLGSTISYACPEG--NMLV-GSATRTC-KEGFWTGVA---- 330
+CG P+ N ST GS I Y C E M G C G W
Sbjct: 3 DCGIPESIENGKVEDPESTLFGSVIRYTCEEPYYYMENGGGGEYHCAGNGSWVNEVLGPE 62
Query: 331 -PTCQ 334
P C
Sbjct: 63 LPKCV 67
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2
hydrolase, family 89 glycoside hydrolase, mucin
carbohydrate-active enzyme; HET: NDG GAL; 1.90A
{Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A*
2vca_A
Length = 914
Score = 45.4 bits (107), Expect = 9e-05
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 9/82 (10%)
Query: 3 STPTSGKVVRSIHFISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKR-CTETQK 61
+SG V R H SG + G + A DG+L+T +
Sbjct: 8 HHHSSGLVPRGSHMASGVEITEGVTVTAKGNTEGNTADLAIDGDLST-----YWESSNDY 62
Query: 62 EVSPWWQVDLLRPYPIRIVRIT 83
+ W +VDL Y + + I
Sbjct: 63 K---WIEVDLGGIYELSKIEIF 81
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 45.4 bits (107), Expect = 9e-05
Identities = 82/525 (15%), Positives = 150/525 (28%), Gaps = 174/525 (33%)
Query: 2 KSTPTSGKVVRSIHFISGTNVALRRPTN---QSSTIRGAPSSNANDGELTTVHDGKRCTE 58
+ + +++++ +I+ + +RP + S+ R NA +L + G
Sbjct: 114 TTLVKTKELIKN--YITA-RIMAKRPFDKKSNSALFRAVGEGNA---QLVAIFGG----- 162
Query: 59 TQKEVSPWWQ--VDLLRPYPIRIVRITTRGCCGHQPLQDLEIRVGNSTDLQKN-----PL 111
Q +++ DL + Y + + + + L +L + + D +K +
Sbjct: 163 -QGNTDDYFEELRDLYQTYHVLVGDLIKFS---AETLSEL---IRTTLDAEKVFTQGLNI 215
Query: 112 CAWF--PGTLGHQPLQDLEIRVGNSTDLQKNPL-----CAWF----------PGTLEEGI 154
W P P +D + + S PL A + PG L +
Sbjct: 216 LEWLENPSN---TPDKDYLLSIPISC-----PLIGVIQLAHYVVTAKLLGFTPGELRSYL 267
Query: 155 TKSFTCARTLVGQNVFIQLVGVEGSLSLCEVEIFTTDGELERRKDRLKTLLVWIG--AQK 212
+ ++ LV V I + + + + T+L +IG +
Sbjct: 268 KGATGHSQGLVTA-VAI-------AET-------DSWESFFVSVRKAITVLFFIGVRCYE 312
Query: 213 DPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNC--VVLDGGRGWLWNDVGCKLDYLH 270
T+ PS +D N G + + V ++
Sbjct: 313 AYPNTSLP-----------PSILEDSLENNEGVPSPMLSI----SNLTQEQVQDYVNKT- 356
Query: 271 WICQHNPANCGSPDRHV-----NT--TFVGTVSTKLGSTISYACPEGNMLVGSATRTCKE 323
H P + V N V VS G S L G K
Sbjct: 357 --NSHLP-----AGKQVEISLVNGAKNLV--VS---GPPQS--------LYGLNLTLRKA 396
Query: 324 GFWTGV----APTCQ---YFQLQ--PMDVPNLVLYLFLSKLFRESYERLNVDCGKLEHIE 374
+G+ P + F + P+ P F S L + + +N D K ++
Sbjct: 397 KAPSGLDQSRIPFSERKLKFSNRFLPVASP------FHSHLLVPASDLINKDLVK-NNVS 449
Query: 375 HGTVTLETTRTTHGAVAIYACHENYTLIGETRRVCGDGGKWNGTEP--QCLF----DWCA 428
+ + +Y T G RV + +E C+ W
Sbjct: 450 FNAKDI--------QIPVYD-----TFDGSDLRVLSG----SISERIVDCIIRLPVKW-- 490
Query: 429 EPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTA 473
T AT+ + FG G LT
Sbjct: 491 --ETT-----------TQFKATH-----ILDFGPGGASGLGVLTH 517
Score = 42.7 bits (100), Expect = 6e-04
Identities = 70/408 (17%), Positives = 112/408 (27%), Gaps = 169/408 (41%)
Query: 554 HSIL-SVTGNDR---LYGRTLIKTADSASSVATYKIGALPTLPAHSIL---SVTGNDRLY 606
H++ + + + + LIK +A +A ++S L GN +L
Sbjct: 102 HALAAKLLQENDTTLVKTKELIKNYITARIMAKRPF----DKKSNSALFRAVGEGNAQLV 157
Query: 607 ----G-----------RTLIKTADSASSVATYK--IGALVKYRCERGYKVEGEPLSTCE- 648
G R L +T Y +G L+K+ E ++ L +
Sbjct: 158 AIFGGQGNTDDYFEELRDLYQT---------YHVLVGDLIKFSAETLSELIRTTLDAEKV 208
Query: 649 -----DTGSWSGSVPECIYVDCGNPETVPNGGF-----------TLTSNATYYGTAVLYE 692
+ W ++ NP P+ + + A Y TA L
Sbjct: 209 FTQGLNILEW---------LE--NPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLG 257
Query: 693 CD-ENYR-----LEGHARRL-----CLENGTWSSGLPTCK---------GNEGH------ 726
R GH++ L E +W S + + G +
Sbjct: 258 FTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNT 317
Query: 727 -----ARRLCLENGTWSSGLPTCKGCKTPKKSLTRPALSCLPGKRFYYHRGIFRLQNTQK 781
LEN G+P+ P LS + + Q
Sbjct: 318 SLPPSILEDSLENN---EGVPS-------------PMLSI---------SNLTQEQVQDY 352
Query: 782 VSYTRTCTKRGTWSGHIPTCKAIDCSHPGSID--NGRVIIMNQTTTYNSAVEYHCV---P 836
V+ T + H+P K + I NG + V V P
Sbjct: 353 VNKTNS---------HLPAGKQV------EISLVNGA----------KNLV----VSGPP 383
Query: 837 QY-QRIGPYLRK-CMEDGSWSGDEPRCEKRFNSGIPGRSRRSPI-NSF 881
Q + LRK G D+ R IP R+ N F
Sbjct: 384 QSLYGLNLTLRKAKAPSGL---DQSR--------IPFSERKLKFSNRF 420
>1md8_A C1R complement serine protease; innate immunity, activation,
substrate specificity, hydrolase; 2.80A {Homo sapiens}
SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Length = 329
Score = 42.8 bits (101), Expect = 3e-04
Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 25/102 (24%)
Query: 664 DCGNPETVPNGGFTLTS--NATYYGTAVLYECDEN-YRLEGHARRLCLENGTWSSGLPTC 720
DCG P +PNG F T+ Y + Y C E Y+++ A E G ++
Sbjct: 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYT------ 54
Query: 721 KGNEGHARRLCLENGTWSS-----GLPTCK-GCKTPKKSLTR 756
C G W + +P C C P + +
Sbjct: 55 ----------CTAQGIWKNEQKGEKIPRCLPVCGKPVNPVEQ 86
Score = 36.2 bits (84), Expect = 0.040
Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 16/74 (21%)
Query: 805 DCSHPGSIDNGRV--IIMNQTTTYNSAVEYHCVPQYQR---------IGPYLRKCMEDGS 853
DC P ++ NG TY + ++Y+C Y + + C G
Sbjct: 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGI 60
Query: 854 WSGDE-----PRCE 862
W ++ PRC
Sbjct: 61 WKNEQKGEKIPRCL 74
Score = 32.8 bits (75), Expect = 0.41
Identities = 22/92 (23%), Positives = 31/92 (33%), Gaps = 20/92 (21%)
Query: 366 DCGKLEHIEHGTVTLETT--RTTHGAVAIYACHENY---------TLIGETRRVCGDGGK 414
DCG+ ++ +G TT T+ A Y CHE Y + C G
Sbjct: 1 DCGQPRNLPNGDFRYTTTMGVNTYKARIQYYCHEPYYKMQTRAGSRESEQGVYTCTAQGI 60
Query: 415 WNG-----TEPQCLFDWC---AEPPQISGGIV 438
W P+CL C P + I+
Sbjct: 61 WKNEQKGEKIPRCLPV-CGKPVNPVEQRQRII 91
>2b5i_D Interleukin-2 receptor alpha chain; four-helix bundle, fibronectin
domain, cytokine-cytokine REC complex; HET: NAG; 2.30A
{Homo sapiens} SCOP: g.18.1.1 g.18.1.1 PDB: 3nfp_I
3iu3_I 1z92_B 2erj_A*
Length = 217
Score = 40.3 bits (93), Expect = 0.001
Identities = 30/168 (17%), Positives = 48/168 (28%), Gaps = 27/168 (16%)
Query: 667 NPETVPNGGFTLTSNATYYGTAVLYECDENYR--LEGHARRLCLENGTWSSGLPTCKGNE 724
+P +P+ T + A GT + EC +R G LC N + SS C+
Sbjct: 6 DPPEIPHA--TFKAMAYKEGTMLNCECKRGFRRIKSGSLYMLCTGNSSHSSWDNQCQCTS 63
Query: 725 GHAR-------------RLCLENGTWSSGLPTCKG-----CKTPKK---SLTRPALSCLP 763
R + S P + C+ P T +
Sbjct: 64 SATRQTTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVV 123
Query: 764 GKRFYYH--RGIFRLQNTQKVSYTRTCTKRGTWSGHIPTCKAIDCSHP 809
G+ YY +G L S + + W+ C +
Sbjct: 124 GQMVYYQCVQGYRALHRGPAESVCKMTHGKTRWTQPQLICTGEMETSQ 171
Score = 30.3 bits (67), Expect = 2.3
Identities = 12/67 (17%), Positives = 19/67 (28%), Gaps = 4/67 (5%)
Query: 395 CHENYTLIGETRRVCGDGGKWNGTEPQC---LFDWCAEPPQIS-GGIVTTSGRRTGSVAT 450
+ T E ++ + +P L C EPP G +
Sbjct: 69 TTKQVTPQPEEQKERKTTEMQSPMQPVDQASLPGHCREPPPWENEATERIYHFVVGQMVY 128
Query: 451 YSCEPGF 457
Y C G+
Sbjct: 129 YQCVQGY 135
Score = 29.1 bits (64), Expect = 4.4
Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 4/97 (4%)
Query: 429 EPPQISGGIVTTSGRRTGSVATYSCEPGFILFGSNVNIDCGRLTAIPYGSISYLNETTYL 488
+PP+I + G++ C+ GF S + S S +
Sbjct: 6 DPPEIPHATFKAMAYKEGTMLNCECKRGFRRIKSGSLY----MLCTGNSSHSSWDNQCQC 61
Query: 489 GSEVLYSCSRNYRLVGHPRRSCLESKVWSDTAPKCEG 525
S ++ ++ +++ S P +
Sbjct: 62 TSSATRQTTKQVTPQPEEQKERKTTEMQSPMQPVDQA 98
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate
binding module, toxin, secreted, virulence, hydrolase,
glycosidase; HET: MSE BTB; 1.45A {Clostridium
perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Length = 192
Score = 38.1 bits (88), Expect = 0.005
Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 4/80 (5%)
Query: 6 TSGKVVRSIHFISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSP 65
+SG V R H S ++ ++S + +N DG+ T K
Sbjct: 11 SSGLVPRGSHMASNPSLI----RSESWQVYEGNEANLLDGDDNTGVWYKTLNGDTSLAGE 66
Query: 66 WWQVDLLRPYPIRIVRITTR 85
+ +DL + + +R
Sbjct: 67 FIGLDLGKEIKLDGIRFVIG 86
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen,
carbohydrate-binding module, sugar-binding protein; HET:
GAL; 2.25A {Clostridium perfringens}
Length = 143
Score = 34.4 bits (79), Expect = 0.056
Identities = 15/77 (19%), Positives = 27/77 (35%), Gaps = 4/77 (5%)
Query: 31 SSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGH 90
+S P+S+A DG + T+ K V+L + + + IT R +
Sbjct: 21 TSEEGQDPASSAIDGNINTMWHTKWNGSDALPQ--SLSVNLGKARKVSSIAITPRTSGNN 78
Query: 91 QPLQDLEIRVGNSTDLQ 107
+ EI +
Sbjct: 79 GFITKYEIHA--INNGV 93
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside
hydrolase, GH84C, hydrolase; HET: GAL; 1.49A
{Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Length = 150
Score = 33.7 bits (77), Expect = 0.091
Identities = 17/79 (21%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 28 TNQSSTIRGAPSSNANDGELTTV-HDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRG 86
+++ ++ AP+S A+DG++ T H + + E ++L Y I V+ R
Sbjct: 17 SSEETSGENAPASFASDGDMNTFWHS--KWSSPAHEGPHHLTLELDNVYEINKVKYAPRQ 74
Query: 87 CCGHQPLQDLEIRVGNSTD 105
+ + ++ V S D
Sbjct: 75 DSKNGRITGYKVSV--SLD 91
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module,
sugar-binding protein, pectin, plant cell WALL,
galacturonic acid; 1.35A {Yersinia enterocolitica} PDB:
2jd9_A
Length = 145
Score = 32.8 bits (75), Expect = 0.17
Identities = 13/75 (17%), Positives = 25/75 (33%), Gaps = 12/75 (16%)
Query: 31 SSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGCCGH 90
+ +G +N DG++ T + + W Q++L + I + I
Sbjct: 18 YDSEKGHVPANIADGDVKT----RWAASGES----WVQLELDKEQSIENILIVPFK--PT 67
Query: 91 QPLQDLEIRVGNSTD 105
+ I S D
Sbjct: 68 ERKLKFSIFY--SND 80
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A,
Q8A9F0_bactn, BT_0865, PSI-2, protein structure
initiative; 3.00A {Bacteroides thetaiotaomicron}
Length = 169
Score = 33.0 bits (75), Expect = 0.20
Identities = 12/86 (13%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Query: 20 TNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRI 79
++ + DG+ T + + +D+ + I
Sbjct: 21 EVLSFTTQEASGEGAGNGLAKCLIDGDTET-FWHAKWQGGSDPLPYDIVIDMKQNIQIAQ 79
Query: 80 VRITTRGCCGHQPLQDLEIRVGNSTD 105
V + RG + P++ +E S D
Sbjct: 80 VELLPRGRGSNNPIKVVEFAA--SED 103
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 32.6 bits (73), Expect = 0.26
Identities = 8/21 (38%), Positives = 14/21 (66%), Gaps = 3/21 (14%)
Query: 511 LES--KVWS-DTAPKCEGKAT 528
L++ K+++ D+AP KAT
Sbjct: 25 LQASLKLYADDSAPALAIKAT 45
Score = 31.1 bits (69), Expect = 0.91
Identities = 8/37 (21%), Positives = 17/37 (45%), Gaps = 9/37 (24%)
Query: 594 HSILSVTGNDRLYGRTLIKTADSASSVATYKIGALVK 630
++ + + +LY DSA ++A I A ++
Sbjct: 20 QALKKLQASLKLYA------DDSAPALA---IKATME 47
Score = 30.7 bits (68), Expect = 1.1
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 21/48 (43%)
Query: 540 DRREIRCPEPTLPAHSILSVTGNDRLYGRTLIKTADSASSVATYKIGA 587
+++ ++ + +L +LY DSA ++A I A
Sbjct: 18 EKQALKKLQASL------------KLYA------DDSAPALA---IKA 44
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein;
hydrolase, family 89 glycoside hydrolase, family 32
carbohyd binding module; HET: GAL; 1.55A {Clostridium
perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Length = 161
Score = 31.4 bits (71), Expect = 0.65
Identities = 13/78 (16%), Positives = 23/78 (29%), Gaps = 4/78 (5%)
Query: 28 TNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRITTRGC 87
+ + A DG+ T+ K + ++L Y I R
Sbjct: 36 SEHPDVGNEGLAKFAIDGKENTIWHTKYNPVEELPQ--SITLELGGSYEINKFTYLPRSG 93
Query: 88 CGHQPLQDLEIRVGNSTD 105
+ + E+ V S D
Sbjct: 94 AKNGNITKYELHV--SED 109
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is
predominantly composed of B strands., structural
genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB:
2kd7_A
Length = 159
Score = 31.0 bits (70), Expect = 0.90
Identities = 11/76 (14%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Query: 31 SSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSP-WWQVDLLRPYPIRIVRITTRGCCG 89
+ + DG + T + + P +D+ I + + RG
Sbjct: 22 GEGSNNGHAKHLIDGNIETFWHSRWQGGSDPL--PYEIIIDMNHRVKIAQIELLPRGRGS 79
Query: 90 HQPLQDLEIRVGNSTD 105
+ P++ + S D
Sbjct: 80 NNPIKVVRFEA--SED 93
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A
{Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A
2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Length = 155
Score = 30.8 bits (69), Expect = 1.1
Identities = 17/79 (21%), Positives = 22/79 (27%), Gaps = 7/79 (8%)
Query: 28 TNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYPIRIVRIT-TRG 86
T S G A DG+L T DG W +D I +I
Sbjct: 14 TQGSWNNIGNTIHKAFDGDLNTFFDGPTAN------GCWLGLDFGEGVRNVITQIKFCPR 67
Query: 87 CCGHQPLQDLEIRVGNSTD 105
Q + + N D
Sbjct: 68 SGYEQRMIGGIFQGANKED 86
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase,
hydrolase; 2.00A {Bifidobacterium longum}
Length = 1376
Score = 31.5 bits (70), Expect = 1.6
Identities = 15/69 (21%), Positives = 23/69 (33%)
Query: 17 ISGTNVALRRPTNQSSTIRGAPSSNANDGELTTVHDGKRCTETQKEVSPWWQVDLLRPYP 76
+ G VA + P+ A DG +T + W+Q +L P
Sbjct: 1224 LGGYTVATGSEEPTAGLPSEGPADLAQDGNDSTHWHTSWSENAVGNGTAWYQFNLNEPTT 1283
Query: 77 IRIVRITTR 85
I +R R
Sbjct: 1284 INGLRYLPR 1292
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL;
1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A*
1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A*
2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B*
3b9j_A* 1fiq_A*
Length = 1332
Score = 30.6 bits (69), Expect = 2.8
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 658 PECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDE-NYRLEGHARRLCLENGTW 713
IY+ + TVPN T S +T YG AV C RLE ++ +G+W
Sbjct: 1058 ISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK--NPDGSW 1113
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein,
electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA
3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB:
1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B*
3ir7_B* 1y4z_B* 3egw_B*
Length = 512
Score = 30.4 bits (68), Expect = 2.8
Identities = 17/81 (20%), Positives = 29/81 (35%), Gaps = 7/81 (8%)
Query: 205 LVWIGAQKDPGITARTWKWVDGEVVTKPSWGKDQPNNYNGEQNCVVLDGGRGWLWNDVG- 263
L AR + GE + K G + ++ GE + + D + +
Sbjct: 111 LHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKNFDNIQKAMYS 170
Query: 264 ----CKLDYLHWICQH--NPA 278
+ YL +C+H NPA
Sbjct: 171 QFENTFMMYLPRLCEHCLNPA 191
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring
domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 80
Score = 27.6 bits (61), Expect = 4.3
Identities = 15/49 (30%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 705 RLCLENGTWSSGLPT---CKGNEGHARRLCLENGTWSSGLPTCKGCKTP 750
R+C G S L T C G+ + CL+ SS C+ CK
Sbjct: 19 RICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYE 67
>2qkh_A Glucose-dependent insulinotropic polypeptide receptor; GPCR,
incretin, hormone-GPCR complex, extracellular domain,
ligand binding domain, ECD; HET: QKH; 1.90A {Homo
sapiens}
Length = 135
Score = 28.6 bits (63), Expect = 5.1
Identities = 6/25 (24%), Positives = 9/25 (36%)
Query: 691 YECDENYRLEGHARRLCLENGTWSS 715
Y ++ G R C +G W
Sbjct: 84 YLPWHHHVAAGFVLRQCGSDGQWGL 108
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine
oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE
I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C*
3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C*
3sr6_C*
Length = 755
Score = 29.6 bits (67), Expect = 5.5
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 658 PECIYVDCGNPETVPNGGFTLTSNATY-YGTAVLYECDE-NYRLEGHARRLCLENGTW 713
IY+ + TVPN T S +T YG AV C RLE ++ +G+W
Sbjct: 488 ISKIYISETSTNTVPNSSPTAASVSTDIYGQAVYEACQTILKRLEPFKKK--NPDGSW 543
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.135 0.437
Gapped
Lambda K H
0.267 0.0332 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 13,567,871
Number of extensions: 817071
Number of successful extensions: 3675
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1858
Number of HSP's successfully gapped: 537
Length of query: 881
Length of database: 6,701,793
Length adjustment: 102
Effective length of query: 779
Effective length of database: 3,853,851
Effective search space: 3002149929
Effective search space used: 3002149929
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.8 bits)