BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11956
(126 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62257|UBE2H_MOUSE Ubiquitin-conjugating enzyme E2 H OS=Mus musculus GN=Ube2h PE=2
SV=1
Length = 183
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%)
Query: 1 MSSASAGNRRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEH 60
MSS S G RRM+ DV+KLIESKHE T L GL EF VKF+GP+ TPYEGGVWKVRV LP+
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 61 YPFKSPSIGFMNKMYHPNIDEVSAV 85
YPFKSPSIGFMNK++HPNIDE S
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEASGT 85
>sp|P62256|UBE2H_HUMAN Ubiquitin-conjugating enzyme E2 H OS=Homo sapiens GN=UBE2H PE=1
SV=1
Length = 183
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%)
Query: 1 MSSASAGNRRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEH 60
MSS S G RRM+ DV+KLIESKHE T L GL EF VKF+GP+ TPYEGGVWKVRV LP+
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 61 YPFKSPSIGFMNKMYHPNIDEVSAV 85
YPFKSPSIGFMNK++HPNIDE S
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEASGT 85
>sp|Q32LN1|UBE2H_BOVIN Ubiquitin-conjugating enzyme E2 H OS=Bos taurus GN=UBE2H PE=2
SV=1
Length = 183
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 63/85 (74%), Positives = 70/85 (82%)
Query: 1 MSSASAGNRRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEH 60
MSS S G RRM+ DV+KLIESKHE T L GL EF VKF+GP+ TPYEGGVWKVRV LP+
Sbjct: 1 MSSPSPGKRRMDTDVVKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDK 60
Query: 61 YPFKSPSIGFMNKMYHPNIDEVSAV 85
YPFKSPSIGFMNK++HPNIDE S
Sbjct: 61 YPFKSPSIGFMNKIFHPNIDEASGT 85
>sp|P28263|UBC8_YEAST Ubiquitin-conjugating enzyme E2-24 kDa OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBC8 PE=1
SV=2
Length = 218
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 44/81 (54%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 5 SAGNRRMNIDVIKLIESKHEGTTLK-GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPF 63
S+ RR+ DV+KL+ S H+ + ++EF VKF GP+DTPYE GVW++ V LP++YP+
Sbjct: 2 SSSKRRIETDVMKLLMSDHQVDLINDSMQEFHVKFLGPKDTPYENGVWRLHVELPDNYPY 61
Query: 64 KSPSIGFMNKMYHPNIDEVSA 84
KSPSIGF+NK++HPNID S
Sbjct: 62 KSPSIGFVNKIFHPNIDIASG 82
>sp|Q9P7R4|UBC8_SCHPO Ubiquitin-conjugating enzyme E2 8 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc8 PE=3 SV=1
Length = 184
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 5 SAGNRRMNIDVIKLIESKHEGTTLK-GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPF 63
S+ RR+ DV+KL+ S +E T + ++EF V+F GP +TPY GG+WKV V LP YP+
Sbjct: 2 SSPRRRIETDVMKLLMSDYEVTLVNDNMQEFYVRFHGPSETPYSGGIWKVHVELPSEYPW 61
Query: 64 KSPSIGFMNKMYHPNIDEVS 83
KSPSIGF+N+++HPNIDE+S
Sbjct: 62 KSPSIGFVNRIFHPNIDELS 81
>sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4 OS=Arabidopsis thaliana GN=UBC4
PE=2 SV=2
Length = 187
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 65/81 (80%), Gaps = 1/81 (1%)
Query: 5 SAGNRRMNIDVIKLIESKHEGTTL-KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPF 63
S+ ++R +D++KL+ S ++ T+ G++EF V+F GP+D+ Y+GGVWK+RV LP+ YP+
Sbjct: 2 SSPSKRREMDMMKLMMSDYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPY 61
Query: 64 KSPSIGFMNKMYHPNIDEVSA 84
KSPS+GF+ K+YHPN+DE+S
Sbjct: 62 KSPSVGFITKIYHPNVDELSG 82
>sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana GN=UBC5
PE=2 SV=2
Length = 185
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 5 SAGNRRMNIDVIKLIESKHEGTTL-KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPF 63
S+ ++R +D++KL+ S ++ + G++EF V+F GP+D+ YEGGVWK+RV LP+ YP+
Sbjct: 2 SSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPY 61
Query: 64 KSPSIGFMNKMYHPNIDEVS 83
KSPS+GF+ K+YHPN+DE+S
Sbjct: 62 KSPSVGFITKIYHPNVDEMS 81
>sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum
GN=UBC4 PE=1 SV=1
Length = 184
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Query: 5 SAGNRRMNIDVIKLIESKHEGTTLK-GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPF 63
S+ ++R +D++KL+ S ++ + G+ EF V F GP+D+ Y+GGVWKVRV L E YP+
Sbjct: 2 SSPSKRREMDLMKLMMSDYKVDMINDGMHEFFVHFHGPKDSIYQGGVWKVRVELTEAYPY 61
Query: 64 KSPSIGFMNKMYHPNIDEVSA 84
KSPSIGF NK+YHPN+DE+S
Sbjct: 62 KSPSIGFTNKIYHPNVDEMSG 82
>sp|P42750|UBC6_ARATH Ubiquitin-conjugating enzyme E2 6 OS=Arabidopsis thaliana GN=UBC6
PE=2 SV=2
Length = 183
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 5 SAGNRRMNIDVIKLIESKHEGTTL-KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPF 63
++ ++R +D++KL+ S ++ T+ L+ F V F GP D+ Y+GGVWK++V LPE YP+
Sbjct: 2 ASPSKRREMDMMKLMMSDYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELPEAYPY 61
Query: 64 KSPSIGFMNKMYHPNIDEVS 83
KSPS+GF+NK+YHPN+DE S
Sbjct: 62 KSPSVGFVNKIYHPNVDESS 81
>sp|Q9FZ48|UBC36_ARATH Ubiquitin-conjugating enzyme E2 36 OS=Arabidopsis thaliana
GN=UBC36 PE=1 SV=1
Length = 153
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 9 RRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFK 64
RR+ + +L+ G + + ++ F V GP +PYEGGV+K+ + LPE YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 65 SPSIGFMNKMYHPNIDEVSAV 85
+P + F+ K+YHPNID++ +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRI 88
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
Y GGV+K+ + LPE YP +P + F+ K+YHPNID++
Sbjct: 49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 85
>sp|Q94A97|UBC35_ARATH Ubiquitin-conjugating enzyme E2 35 OS=Arabidopsis thaliana
GN=UBC35 PE=1 SV=1
Length = 153
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 9 RRMNIDVIKLIESKHEGTTLK----GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFK 64
RR+ + +L+ G + ++ F V GP +PYEGGV+K+ + LPE YP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 65 SPSIGFMNKMYHPNIDEVSAV 85
+P + F+ K+YHPNID++ +
Sbjct: 68 APKVRFLTKIYHPNIDKLGRI 88
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
Y GGV+K+ + LPE YP +P + F+ K+YHPNID++
Sbjct: 49 YEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKL 85
>sp|Q5R7J6|UBE2N_PONAB Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2
SV=1
Length = 152
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP+D+P+EGG +K+ + LPE YP +P + FM K+YHPN+D++ +
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRI 86
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GG +K+ + LPE YP +P + FM K+YHPN+D++
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
>sp|P61089|UBE2N_MOUSE Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1
SV=1
Length = 152
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP+D+P+EGG +K+ + LPE YP +P + FM K+YHPN+D++ +
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRI 86
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GG +K+ + LPE YP +P + FM K+YHPN+D++
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
>sp|P61088|UBE2N_HUMAN Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1
SV=1
Length = 152
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP+D+P+EGG +K+ + LPE YP +P + FM K+YHPN+D++ +
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRI 86
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GG +K+ + LPE YP +P + FM K+YHPN+D++
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
>sp|Q0P5K3|UBE2N_BOVIN Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2
SV=1
Length = 152
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP+D+P+EGG +K+ + LPE YP +P + FM K+YHPN+D++ +
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRI 86
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GG +K+ + LPE YP +P + FM K+YHPN+D++
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
>sp|Q9EQX9|UBE2N_RAT Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n
PE=1 SV=1
Length = 152
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP+D+P+EGG +K+ + LPE YP +P + FM K+YHPN+D++ +
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRI 86
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GG +K+ + LPE YP +P + FM K+YHPN+D++
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 83
>sp|Q4R4I1|UBE2N_MACFA Ubiquitin-conjugating enzyme E2 N OS=Macaca fascicularis GN=UBE2N
PE=2 SV=1
Length = 152
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 81
F V GP+D+P+EGG +K+ + LPE YP +P + FM K+YHPN+D+
Sbjct: 35 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK 82
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
+ GG +K+ + LPE YP +P + FM K+YHPN+D+
Sbjct: 47 FEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK 82
>sp|P35128|UBE2N_DROME Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster
GN=ben PE=2 SV=1
Length = 151
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP D+P+EGGV+K+ + LPE YP +P + F+ K+YHPNID + +
Sbjct: 35 FHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRI 86
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GGV+K+ + LPE YP +P + F+ K+YHPNID +
Sbjct: 47 FEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRL 83
>sp|Q32LD2|UBE2T_BOVIN Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2
SV=2
Length = 195
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 31 LKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
+++ + G +TPYE GV+K+ VH+PE YPF+ P I F+ +YHPNID +
Sbjct: 31 MEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRI 85
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
Y GV+K+ VH+PE YPF+ P I F+ +YHPNID
Sbjct: 46 YEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSA 82
>sp|P52490|UBC13_YEAST Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC13 PE=1 SV=1
Length = 153
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 9 RRMNIDVIKLIESKHEGTTLK----GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFK 64
+R+ + KL+ G T + L+ F V GP +PYE G++++ ++LP+ YP +
Sbjct: 6 KRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPME 65
Query: 65 SPSIGFMNKMYHPNIDEVSAV 85
+P + F+ K+YHPNID + +
Sbjct: 66 APKVRFLTKIYHPNIDRLGRI 86
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
Y G++++ ++LP+ YP ++P + F+ K+YHPNID +
Sbjct: 47 YEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRL 83
>sp|Q08BH7|UBE2T_DANRE Ubiquitin-conjugating enzyme E2 T OS=Danio rerio GN=ube2t PE=2 SV=1
Length = 194
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 31 LKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAVFYYG- 89
L E + G +TPYEGGV+ + +++PE YPF+ P + F+ +YHPNID +
Sbjct: 31 LDELQAQIVGGANTPYEGGVFTLEINIPERYPFEPPKMRFLTPIYHPNIDNAGRICLDAL 90
Query: 90 -----GVWKVRVHL 98
G W+ +++
Sbjct: 91 KLPPKGAWRPSLNI 104
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 79 IDEVSAVF-------YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
+DE+ A Y GGV+ + +++PE YPF+ P + F+ +YHPNID
Sbjct: 31 LDELQAQIVGGANTPYEGGVFTLEINIPERYPFEPPKMRFLTPIYHPNID 80
>sp|Q9FKT3|UBC30_ARATH Ubiquitin-conjugating enzyme E2 30 OS=Arabidopsis thaliana
GN=UBC30 PE=2 SV=1
Length = 148
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 7 GNRRMNIDVIKLIE----SKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYP 62
++R+N ++ L S G T + ++ GP D+P+ GGV+ V +H P YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 63 FKSPSIGFMNKMYHPNIDEVSAV 85
FK P + F K+YHPNI+ ++
Sbjct: 62 FKPPKVAFRTKVYHPNINSNGSI 84
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
+ GGV+ V +H P YPFK P + F K+YHPNI+
Sbjct: 45 FAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINS 80
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F K+YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSI 84
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
Y GGV+ + +H P YPFK P + F K+YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNIN 79
>sp|P61087|UBE2K_MOUSE Ubiquitin-conjugating enzyme E2 K OS=Mus musculus GN=Ube2k PE=1
SV=3
Length = 200
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 37 KFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAVF 86
+ GP DTPYEGG +++ + +PE YPF P + F+ K++HPNI V+
Sbjct: 42 EIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSG 125
Y GG +++ + +PE YPF P + F+ K++HPNI V+G
Sbjct: 51 YEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 89
>sp|P61086|UBE2K_HUMAN Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens GN=UBE2K PE=1
SV=3
Length = 200
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 37 KFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAVF 86
+ GP DTPYEGG +++ + +PE YPF P + F+ K++HPNI V+
Sbjct: 42 EIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSG 125
Y GG +++ + +PE YPF P + F+ K++HPNI V+G
Sbjct: 51 YEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 89
>sp|P61085|UBE2K_BOVIN Ubiquitin-conjugating enzyme E2 K OS=Bos taurus GN=UBE2K PE=1
SV=3
Length = 200
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 37 KFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAVF 86
+ GP DTPYEGG +++ + +PE YPF P + F+ K++HPNI V+
Sbjct: 42 EIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGAI 91
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSG 125
Y GG +++ + +PE YPF P + F+ K++HPNI V+G
Sbjct: 51 YEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 89
>sp|Q3ZCF7|UB2D3_BOVIN Ubiquitin-conjugating enzyme E2 D3 OS=Bos taurus GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNDSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P15731|UBC4_YEAST Ubiquitin-conjugating enzyme E2 4 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC4 PE=1 SV=1
Length = 148
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 29/45 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80
GP D+PY GGV+ + +H P YPFK P I F K+YHPNI+
Sbjct: 36 ASIMGPADSPYAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNIN 80
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
Y GGV+ + +H P YPFK P I F K+YHPNI+
Sbjct: 46 YAGGVFFLSIHFPTDYPFKPPKISFTTKIYHPNIN 80
>sp|P61078|UB2D3_RAT Ubiquitin-conjugating enzyme E2 D3 OS=Rattus norvegicus GN=Ube2d3
PE=2 SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|Q5R4V7|UB2D3_PONAB Ubiquitin-conjugating enzyme E2 D3 OS=Pongo abelii GN=UBE2D3 PE=2
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P61079|UB2D3_MOUSE Ubiquitin-conjugating enzyme E2 D3 OS=Mus musculus GN=Ube2d3 PE=1
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|Q4R5N4|UB2D3_MACFA Ubiquitin-conjugating enzyme E2 D3 OS=Macaca fascicularis
GN=UBE2D3 PE=2 SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P61077|UB2D3_HUMAN Ubiquitin-conjugating enzyme E2 D3 OS=Homo sapiens GN=UBE2D3 PE=1
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|Q06AA9|UB2D2_PIG Ubiquitin-conjugating enzyme E2 D2 OS=Sus scrofa GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|Q86K32|UBE2N_DICDI Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium
discoideum GN=ube2n PE=3 SV=2
Length = 154
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 34 FCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
F V GP D+P+EGGV+ + + L + YP +P + F+ K+YHPNID++ +
Sbjct: 35 FKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRI 86
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123
+ GGV+ + + L + YP +P + F+ K+YHPNID++
Sbjct: 47 FEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKL 83
>sp|P62840|UB2D2_XENLA Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2
PE=1 SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P62839|UB2D2_RAT Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2
PE=1 SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P62838|UB2D2_MOUSE Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P62837|UB2D2_HUMAN Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|Q1RMX2|UB2D2_BOVIN Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2
SV=1
Length = 147
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 80
>sp|P15732|UBC5_YEAST Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBC5 PE=1
SV=1
Length = 148
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 81
GP D+PY GGV+ + +H P YPFK P + F K+YHPNI+
Sbjct: 36 ASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINS 81
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F K+YHPNI+
Sbjct: 46 YAGGVFFLSIHFPTDYPFKPPKVNFTTKIYHPNINS 81
>sp|A5PKP9|UB2D4_XENLA Ubiquitin-conjugating enzyme E2 D4 OS=Xenopus laevis GN=ube2d4
PE=1 SV=1
Length = 147
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 38 FFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+P++GGV+ + +H P YPFK P + F K+YHPNI+ ++
Sbjct: 37 IMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSI 84
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
+ GGV+ + +H P YPFK P + F K+YHPNI+
Sbjct: 45 FQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNIN 79
>sp|Q9NPD8|UBE2T_HUMAN Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1
SV=1
Length = 197
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 31 LKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
+ + + G +TPYE GV+K+ V +PE YPF+ P I F+ +YHPNID +
Sbjct: 31 MDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRI 85
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
Y GV+K+ V +PE YPF+ P I F+ +YHPNID
Sbjct: 46 YEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNID 80
>sp|P35132|UBC9_ARATH SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1
SV=1
Length = 148
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 38 FFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY GGV+ V +H P YPFK P + F K++HPNI+ ++
Sbjct: 37 IMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ V +H P YPFK P + F K++HPNI+
Sbjct: 45 YSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>sp|Q941B6|UBC37_ARATH Probable ubiquitin-conjugating enzyme E2 37 OS=Arabidopsis
thaliana GN=UBC37 PE=2 SV=2
Length = 409
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 40 GPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80
GP DT Y G++ +++ +PE YPF+ P + F +YHPNID
Sbjct: 53 GPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNID 93
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
Y G++ +++ +PE YPF+ P + F +YHPNID
Sbjct: 59 YANGIFNLKIQIPERYPFQPPIVSFATPIYHPNID 93
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 36 VKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY+GGV+ + +H P YPFK P + F ++YHPNI+ ++
Sbjct: 35 ATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 79
>sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum
PE=2 SV=1
Length = 148
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 38 FFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 81
GP D+PY GGV+ V +H P YPFK P + F K++HPNI+
Sbjct: 37 IMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ V +H P YPFK P + F K++HPNI+
Sbjct: 45 YAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80
>sp|P52492|UBC11_YEAST Ubiquitin-conjugating enzyme E2-18 kDa OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBC11 PE=1
SV=1
Length = 156
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 8 NRRMNIDVIKLIESKHEGTTLKGLKEFCVKFF-----GPRDTPYEGGVWKVRVHLPEHYP 62
+R+ ++++L+ S E + + + + ++ GP+DTPY G +KV + P++YP
Sbjct: 10 TKRLQNELLQLLSSTTESISAFPVDDNDLTYWVGYITGPKDTPYSGLKFKVSLKFPQNYP 69
Query: 63 FKSPSIGFMNKMYHPNIDE 81
F P I F++ M+HPN+D+
Sbjct: 70 FHPPMIKFLSPMWHPNVDK 88
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y G +KV + P++YPF P I F++ M+HPN+D+
Sbjct: 53 YSGLKFKVSLKFPQNYPFHPPMIKFLSPMWHPNVDK 88
>sp|Q9UVR2|UBC1_MAGO7 Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=UBC1 PE=3
SV=2
Length = 147
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 9 RRMNIDVIKL----IESKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFK 64
+R+N ++ L S G + L + GP D+PY GGV+ + +H P YPFK
Sbjct: 4 KRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFK 63
Query: 65 SPSIGFMNKMYHPNIDEVSAV 85
P + F ++YHPNI+ ++
Sbjct: 64 PPKVNFTTRIYHPNINSNGSI 84
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ + +H P YPFK P + F ++YHPNI+
Sbjct: 45 YAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINS 80
>sp|Q8S920|UBC5A_ORYSJ Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa subsp.
japonica GN=UBC5A PE=2 SV=1
Length = 147
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 38 FFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAV 85
GP D+PY GGV+ V +H P YPFK P + F K++HPNI+ ++
Sbjct: 37 IMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSI 84
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 87 YYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122
Y GGV+ V +H P YPFK P + F K++HPNI+
Sbjct: 45 YAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 80
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.139 0.444
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,141,885
Number of Sequences: 539616
Number of extensions: 2386039
Number of successful extensions: 4012
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 287
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 3410
Number of HSP's gapped (non-prelim): 619
length of query: 126
length of database: 191,569,459
effective HSP length: 92
effective length of query: 34
effective length of database: 141,924,787
effective search space: 4825442758
effective search space used: 4825442758
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)