Query psy11956
Match_columns 126
No_of_seqs 126 out of 1386
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 23:15:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11956.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11956hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ayz_A UBC2, ubiquitin-conjuga 100.0 8.7E-38 3E-42 219.5 3.3 114 1-123 1-121 (169)
2 2aak_A UBC1, ubiquitin conjuga 100.0 2.2E-37 7.4E-42 214.2 3.6 114 1-123 1-121 (152)
3 2c2v_B Ubiquitin-conjugating e 100.0 3.4E-37 1.2E-41 213.7 3.9 112 5-123 4-122 (154)
4 2fo3_A Ubiquitin-conjugating e 100.0 3.3E-37 1.1E-41 207.1 3.1 110 6-122 6-123 (125)
5 1yrv_A Ubiquitin-conjugating l 100.0 3.1E-37 1.1E-41 216.7 2.4 113 5-123 22-143 (169)
6 2ucz_A UBC7, ubiquitin conjuga 100.0 5.3E-37 1.8E-41 214.8 2.9 114 1-123 1-135 (165)
7 2e2c_A Ubiquitin conjugating e 100.0 1.1E-36 3.8E-41 211.5 4.3 112 5-123 8-126 (156)
8 4gpr_A Ubiquitin-conjugating e 100.0 9.6E-37 3.3E-41 210.8 3.8 113 4-123 2-121 (151)
9 1zdn_A Ubiquitin-conjugating e 100.0 6.3E-37 2.2E-41 213.1 2.8 111 5-122 12-129 (158)
10 3rz3_A Ubiquitin-conjugating e 100.0 1.4E-36 4.7E-41 215.9 3.8 115 1-123 3-138 (183)
11 2bep_A Ubiquitin-conjugating e 100.0 1.6E-36 5.6E-41 211.2 3.3 113 5-123 7-129 (159)
12 2c4o_A Ubiquitin-conjugating e 100.0 2.1E-36 7.2E-41 211.8 3.8 113 4-123 17-136 (165)
13 3h8k_A Ubiquitin-conjugating e 100.0 2.8E-36 9.4E-41 210.9 4.1 112 5-123 2-134 (164)
14 2ayv_A Ubiquitin-conjugating e 100.0 2.6E-36 8.8E-41 211.5 3.9 112 5-123 20-138 (166)
15 1yh2_A HSPC150 protein similar 100.0 2.6E-36 9E-41 212.0 4.0 112 5-123 3-125 (169)
16 1jat_A Ubiquitin-conjugating e 100.0 1.2E-36 4.1E-41 211.1 2.0 112 5-123 4-122 (155)
17 1z2u_A Ubiquitin-conjugating e 100.0 2E-36 6.8E-41 208.9 2.9 111 5-122 3-120 (150)
18 3rcz_B SUMO-conjugating enzyme 100.0 2.4E-36 8.2E-41 211.1 3.2 113 4-123 8-134 (163)
19 1i7k_A Ubiquitin-conjugating e 100.0 1.4E-36 4.9E-41 215.0 2.1 112 5-123 29-147 (179)
20 2awf_A Ubiquitin-conjugating e 100.0 3.5E-36 1.2E-40 211.9 3.8 112 4-122 15-147 (172)
21 2gjd_A Ubiquitin-conjugating e 100.0 2.3E-36 7.9E-41 210.1 2.8 114 1-123 1-128 (157)
22 2r0j_A Ubiquitin carrier prote 100.0 1.9E-36 6.6E-41 208.8 2.2 110 7-123 2-118 (149)
23 2h2y_A Ubiquitin-conjugating e 100.0 4.8E-36 1.6E-40 204.1 3.9 109 5-120 19-135 (136)
24 1fxt_A Ubiquitin-conjugating e 100.0 2.1E-36 7E-41 208.7 2.1 111 7-123 2-120 (149)
25 2pwq_A Ubiquitin conjugating e 100.0 4E-36 1.4E-40 218.1 3.0 113 5-123 22-141 (216)
26 2grr_A Ubiquitin-conjugating e 100.0 5.2E-36 1.8E-40 209.0 3.0 114 1-123 4-131 (161)
27 3k9o_A Ubiquitin-conjugating e 100.0 5.2E-36 1.8E-40 215.6 2.7 115 1-123 2-126 (201)
28 2z5d_A Ubiquitin-conjugating e 100.0 6.4E-36 2.2E-40 211.6 2.5 117 1-123 20-140 (179)
29 3bzh_A Ubiquitin-conjugating e 100.0 1.8E-35 6.1E-40 211.7 3.8 112 5-123 47-165 (194)
30 1jat_B Ubiquitin-conjugating e 100.0 4.1E-36 1.4E-40 204.9 -0.4 115 1-122 2-128 (138)
31 2f4z_A Tgtwinscan_2721 - E2 do 100.0 1.3E-35 4.5E-40 212.2 2.0 113 5-123 31-163 (193)
32 2a7l_A Hypothetical ubiquitin- 100.0 2.6E-35 8.8E-40 200.4 3.3 102 7-115 23-135 (136)
33 2a4d_A Ubiquitin-conjugating e 100.0 4.6E-35 1.6E-39 203.9 3.4 113 5-123 24-150 (160)
34 2y9m_A Ubiquitin-conjugating e 100.0 4.9E-35 1.7E-39 206.1 3.6 114 4-123 4-138 (172)
35 3e46_A Ubiquitin-conjugating e 100.0 6.2E-35 2.1E-39 216.0 3.6 113 5-123 56-178 (253)
36 1tte_A Ubiquitin-conjugating e 100.0 1.2E-35 4.1E-40 215.4 -2.3 112 6-123 2-121 (215)
37 2q0v_A Ubiquitin-conjugating e 100.0 1.8E-34 6.2E-39 200.2 3.2 111 5-122 20-143 (156)
38 1yf9_A Ubiquitin carrier prote 100.0 1E-34 3.4E-39 204.3 1.8 111 6-123 12-127 (171)
39 2onu_A Ubiquitin-conjugating e 100.0 5.9E-35 2E-39 202.0 0.1 112 6-123 2-118 (152)
40 1wzv_A Ubiquitin-conjugating e 100.0 1.3E-34 4.5E-39 200.8 1.9 110 6-123 4-122 (155)
41 3fn1_B NEDD8-conjugating enzym 100.0 3.6E-34 1.2E-38 200.7 3.5 111 4-122 12-137 (167)
42 2hlw_A Ubiquitin-conjugating e 100.0 1.6E-34 5.5E-39 203.0 0.4 112 5-122 34-159 (170)
43 1c4z_D UBCH7, ubiquitin conjug 100.0 1.3E-34 4.4E-39 200.6 -0.2 108 7-122 3-119 (154)
44 1y8x_A Ubiquitin-conjugating e 100.0 4.4E-34 1.5E-38 199.1 1.5 109 5-123 5-121 (160)
45 2nvu_C NEDD8-conjugating enzym 100.0 9E-34 3.1E-38 200.8 1.4 110 4-123 24-141 (180)
46 4ds2_A Ubiquitin-conjugating e 100.0 7.5E-34 2.6E-38 199.1 0.2 99 1-102 5-124 (167)
47 4ddg_A Ubiquitin-conjugating e 100.0 1.2E-32 3.9E-37 215.5 3.0 112 5-123 2-120 (399)
48 2f4w_A Ubiquitin-conjugating e 100.0 2.4E-32 8.3E-37 194.5 2.5 108 5-121 13-130 (187)
49 3ceg_A Baculoviral IAP repeat- 100.0 8.6E-32 2.9E-36 204.6 3.6 111 5-122 75-211 (323)
50 3o2u_A NEDD8-conjugating enzym 100.0 4.8E-32 1.6E-36 193.4 1.0 110 4-123 27-150 (190)
51 1zuo_A Hypothetical protein LO 100.0 2.7E-32 9.3E-37 194.1 -2.2 109 5-120 26-158 (186)
52 2z6o_A UFM1-conjugating enzyme 99.9 9.4E-26 3.2E-30 156.1 -0.6 93 7-102 33-143 (172)
53 3kpa_A Probable ubiquitin fold 99.7 1.2E-17 4.2E-22 113.4 3.3 90 6-98 34-134 (168)
54 3r3q_A Suppressor protein STP2 99.6 4.4E-16 1.5E-20 108.1 0.9 108 8-122 30-161 (162)
55 3obq_A Tumor susceptibility ge 98.8 2.3E-09 7.9E-14 73.0 3.2 67 29-101 51-128 (146)
56 1jat_B Ubiquitin-conjugating e 98.6 3.2E-08 1.1E-12 66.7 4.0 52 75-126 42-93 (138)
57 1fxt_A Ubiquitin-conjugating e 98.6 5.4E-08 1.9E-12 66.3 4.2 52 75-126 34-85 (149)
58 2onu_A Ubiquitin-conjugating e 98.5 6.5E-08 2.2E-12 66.2 3.9 52 75-126 31-82 (152)
59 1tte_A Ubiquitin-conjugating e 98.5 6.2E-08 2.1E-12 69.9 3.7 52 75-126 35-86 (215)
60 2bep_A Ubiquitin-conjugating e 98.5 7.3E-08 2.5E-12 66.3 3.8 52 75-126 43-94 (159)
61 3k9o_A Ubiquitin-conjugating e 98.5 7.8E-08 2.7E-12 68.6 3.8 52 75-126 40-91 (201)
62 2pwq_A Ubiquitin conjugating e 98.5 7.8E-08 2.7E-12 69.4 3.8 51 76-126 56-106 (216)
63 1ayz_A UBC2, ubiquitin-conjuga 98.5 7.9E-08 2.7E-12 66.9 3.7 51 75-126 36-86 (169)
64 1yf9_A Ubiquitin carrier prote 98.5 9.4E-08 3.2E-12 66.6 3.8 52 75-126 40-91 (171)
65 1jat_A Ubiquitin-conjugating e 98.5 1.3E-07 4.3E-12 64.9 3.9 51 75-126 37-87 (155)
66 2aak_A UBC1, ubiquitin conjuga 98.4 1.2E-07 4.2E-12 64.7 3.7 51 75-126 36-86 (152)
67 2a4d_A Ubiquitin-conjugating e 98.4 1.4E-07 4.9E-12 65.1 4.0 50 77-126 63-112 (160)
68 2f4z_A Tgtwinscan_2721 - E2 do 98.4 1.3E-07 4.5E-12 67.1 3.8 52 75-126 77-128 (193)
69 2ucz_A UBC7, ubiquitin conjuga 98.4 1.5E-07 5E-12 65.1 3.7 51 75-126 37-87 (165)
70 2z5d_A Ubiquitin-conjugating e 98.4 1.5E-07 5.3E-12 66.0 3.8 52 75-126 53-104 (179)
71 2hlw_A Ubiquitin-conjugating e 98.4 1.4E-07 4.7E-12 65.7 3.6 52 75-126 71-122 (170)
72 3h8k_A Ubiquitin-conjugating e 98.4 1.5E-07 5.2E-12 65.0 3.7 51 75-126 36-86 (164)
73 1i7k_A Ubiquitin-conjugating e 98.4 1.8E-07 6.2E-12 65.6 4.2 51 75-126 62-112 (179)
74 1yrv_A Ubiquitin-conjugating l 98.4 1.6E-07 5.3E-12 65.4 3.7 52 75-126 55-106 (169)
75 4gpr_A Ubiquitin-conjugating e 98.4 1.6E-07 5.4E-12 64.1 3.7 51 75-126 36-86 (151)
76 1z2u_A Ubiquitin-conjugating e 98.4 1.7E-07 5.7E-12 63.9 3.7 51 75-126 36-86 (150)
77 2e2c_A Ubiquitin conjugating e 98.4 1.7E-07 6E-12 64.2 3.7 49 77-126 43-91 (156)
78 2r0j_A Ubiquitin carrier prote 98.4 1.8E-07 6.3E-12 63.7 3.7 51 75-126 33-83 (149)
79 2c2v_B Ubiquitin-conjugating e 98.4 1.9E-07 6.7E-12 63.9 3.8 51 75-126 37-87 (154)
80 3rz3_A Ubiquitin-conjugating e 98.4 1.9E-07 6.6E-12 65.7 3.7 51 75-126 40-90 (183)
81 2q0v_A Ubiquitin-conjugating e 98.4 2.1E-07 7.3E-12 63.9 3.8 49 77-126 59-107 (156)
82 1zdn_A Ubiquitin-conjugating e 98.4 2.1E-07 7.1E-12 64.0 3.7 51 75-126 45-95 (158)
83 2fo3_A Ubiquitin-conjugating e 98.4 2.3E-07 7.9E-12 61.4 3.7 51 75-126 38-89 (125)
84 1yh2_A HSPC150 protein similar 98.4 2.2E-07 7.5E-12 64.6 3.7 51 75-126 36-86 (169)
85 3rcz_B SUMO-conjugating enzyme 98.4 2.4E-07 8.1E-12 64.1 3.7 51 75-126 47-97 (163)
86 2ayv_A Ubiquitin-conjugating e 98.4 2.3E-07 7.9E-12 64.3 3.7 51 75-126 53-103 (166)
87 2c4o_A Ubiquitin-conjugating e 98.4 2.4E-07 8.2E-12 64.2 3.7 51 75-126 51-101 (165)
88 2gjd_A Ubiquitin-conjugating e 98.4 2.3E-07 7.9E-12 63.7 3.6 51 75-126 41-91 (157)
89 2a7l_A Hypothetical ubiquitin- 98.4 3.1E-07 1E-11 61.8 4.0 51 75-126 56-108 (136)
90 2h2y_A Ubiquitin-conjugating e 98.4 3.2E-07 1.1E-11 61.6 4.1 51 75-126 52-103 (136)
91 3e46_A Ubiquitin-conjugating e 98.4 2.5E-07 8.5E-12 68.2 3.8 52 75-126 92-143 (253)
92 2awf_A Ubiquitin-conjugating e 98.3 3.2E-07 1.1E-11 63.9 3.8 51 75-126 50-100 (172)
93 2grr_A Ubiquitin-conjugating e 98.3 3.3E-07 1.1E-11 63.2 3.7 51 75-126 44-94 (161)
94 2y9m_A Ubiquitin-conjugating e 98.3 2.4E-07 8.2E-12 64.6 2.9 52 75-126 50-102 (172)
95 1wzv_A Ubiquitin-conjugating e 98.3 3.2E-07 1.1E-11 62.8 3.4 44 82-126 43-86 (155)
96 4ds2_A Ubiquitin-conjugating e 98.3 5.1E-07 1.7E-11 62.6 4.4 51 75-126 52-104 (167)
97 3bzh_A Ubiquitin-conjugating e 98.3 4.2E-07 1.4E-11 64.6 3.7 51 75-126 80-130 (194)
98 1c4z_D UBCH7, ubiquitin conjug 98.3 7.6E-07 2.6E-11 60.9 4.2 44 82-126 41-84 (154)
99 1y8x_A Ubiquitin-conjugating e 98.2 8.2E-07 2.8E-11 61.2 3.6 44 82-126 43-86 (160)
100 2nvu_C NEDD8-conjugating enzym 98.2 8.5E-07 2.9E-11 62.2 3.7 45 81-126 62-106 (180)
101 3fn1_B NEDD8-conjugating enzym 98.1 1.3E-06 4.4E-11 60.4 3.4 43 83-126 54-96 (167)
102 4ddg_A Ubiquitin-conjugating e 98.1 2.2E-06 7.4E-11 66.9 4.0 51 75-126 35-85 (399)
103 3o2u_A NEDD8-conjugating enzym 98.1 2.7E-06 9.1E-11 60.2 3.6 43 83-126 73-115 (190)
104 3ceg_A Baculoviral IAP repeat- 98.0 5.5E-06 1.9E-10 62.9 4.1 51 75-126 112-167 (323)
105 2z6o_A UFM1-conjugating enzyme 97.7 2.6E-05 8.8E-10 54.0 4.1 50 76-126 59-119 (172)
106 1zuo_A Hypothetical protein LO 97.3 5.7E-05 2E-09 53.1 1.2 35 90-125 89-124 (186)
107 2f4w_A Ubiquitin-conjugating e 97.3 0.0002 6.7E-09 50.4 3.7 48 75-125 46-93 (187)
108 2ebm_A RWD domain-containing p 96.7 0.0076 2.6E-07 39.2 7.4 67 7-73 11-79 (128)
109 3kpa_A Probable ubiquitin fold 96.2 0.0033 1.1E-07 42.8 3.1 44 82-126 67-121 (168)
110 2yz0_A Serine/threonine-protei 96.0 0.088 3E-06 34.5 9.5 65 8-73 12-86 (138)
111 2day_A Ring finger protein 25; 95.8 0.061 2.1E-06 34.8 7.9 67 7-73 9-83 (128)
112 2ebk_A RWD domain-containing p 95.1 0.077 2.6E-06 34.3 6.4 65 7-72 8-79 (128)
113 3r3q_A Suppressor protein STP2 95.0 0.032 1.1E-06 38.3 4.4 34 92-126 83-127 (162)
114 1ukx_A GCN2, GCN2 EIF2alpha ki 94.6 0.25 8.7E-06 32.1 8.0 65 7-72 11-86 (137)
115 2dax_A Protein C21ORF6; RWD do 92.4 0.49 1.7E-05 31.5 6.6 24 50-73 74-97 (152)
116 3obq_A Tumor susceptibility ge 91.6 0.39 1.3E-05 32.2 5.2 36 89-126 66-109 (146)
117 2daw_A RWD domain containing p 88.2 0.45 1.5E-05 31.9 3.5 24 50-73 76-99 (154)
118 3zqs_A E3 ubiquitin-protein li 82.5 3 0.0001 29.0 5.5 59 9-73 4-62 (186)
119 3u3c_B Paxillin LD2 peptide; 4 44.5 12 0.00042 16.9 1.4 19 7-25 6-24 (26)
120 2c5k_P Vacuolar protein sortin 31.2 22 0.00074 16.5 1.1 13 8-20 12-24 (26)
121 2rf4_B DNA-directed RNA polyme 30.7 19 0.00066 21.7 1.2 13 6-18 62-74 (87)
122 3g9r_A Fusion complex of HIV-1 25.7 38 0.0013 17.3 1.6 15 6-20 28-42 (42)
123 3zs9_C Golgi to ER traffic pro 25.5 53 0.0018 16.6 2.1 19 1-19 1-20 (38)
124 2zzj_A Glucuronan lyase A; bet 25.1 1.2E+02 0.0043 21.6 4.8 45 49-98 68-112 (238)
125 3kxt_A Chromatin protein CREN7 24.5 96 0.0033 17.0 3.4 11 53-63 46-56 (56)
126 2bum_A Protocatechuate 3,4-dio 24.0 73 0.0025 22.2 3.4 26 47-72 109-139 (209)
No 1
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=8.7e-38 Score=219.53 Aligned_cols=114 Identities=25% Similarity=0.507 Sum_probs=106.7
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccc
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYH 76 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 76 (126)
|| +++.+||++||++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 1 Ms--~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 78 (169)
T 1ayz_A 1 MS--TPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 78 (169)
T ss_dssp -C--CHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCcc
Confidence 77 689999999999999999988876 789999999999999999999999999999999999999999999999
Q ss_pred cccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 77 PNIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 77 pnv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|||+. +|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 79 PNI~~-~G~ICl~iL~~~WsP~~~i~~vL------~si~~ll~~Pn~~~P 121 (169)
T 1ayz_A 79 PNVYA-NGEICLDILQNRWTPTYDVASIL------TSIQSLFNDPNPASP 121 (169)
T ss_dssp TTBCT-TSBBCCGGGTTTCCTTCCHHHHH------HHHHHHHTCCCCSSC
T ss_pred CCCCC-CCeEeehhhccCCCCcCcHHHHH------HHHHHHHhCCCCCcH
Confidence 99995 999999 68899999999997 999999999998763
No 2
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=2.2e-37 Score=214.17 Aligned_cols=114 Identities=25% Similarity=0.545 Sum_probs=107.3
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccc
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYH 76 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 76 (126)
|| +.+.+||++|+++|++++..++.+ +|++.|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++||
T Consensus 1 Ms--~~a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 78 (152)
T 2aak_A 1 MS--TPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFH 78 (152)
T ss_dssp CC--CHHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCccc
Confidence 78 689999999999999999888875 789999999999999999999999999999999999999999999999
Q ss_pred cccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 77 PNIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 77 pnv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|||+. +|.||+ .+.|+|++++.++| .+++++|.+||.++.
T Consensus 79 Pnv~~-~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 121 (152)
T 2aak_A 79 PNIYA-DGSICLDILQNQWSPIYDVAAIL------TSIQSLLCDPNPNSP 121 (152)
T ss_dssp TTBCT-TSBBCCGGGTTSCCTTCCHHHHH------HHHHHHHTSCCTTSC
T ss_pred CCCCC-CCEEechhhcCCCCCCCcHHHHH------HHHHHHHhCCCCCcc
Confidence 99995 999999 68999999999997 999999999998763
No 3
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.4e-37 Score=213.66 Aligned_cols=112 Identities=29% Similarity=0.593 Sum_probs=105.7
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
..+.+||++|+++|++++..++.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (154)
T 2c2v_B 4 AGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVD 83 (154)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCc
Confidence 578999999999999999888876 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
.+|+||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 84 -~~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~pn~~~p 122 (154)
T 2c2v_B 84 -KLGRICLDILKDKWSPALQIRTVL------LSIQALLSAPNPDDP 122 (154)
T ss_dssp -TTCBBCCHHHHTSCCTTCCHHHHH------HHHHHHTTSCCCCCC
T ss_pred -cCCeEEchhccCCCCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 4899999 68999999999997 999999999998763
No 4
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-37 Score=207.09 Aligned_cols=110 Identities=18% Similarity=0.418 Sum_probs=96.5
Q ss_pred hhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeec-cccccc
Q psy11956 6 AGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKM-YHPNID 80 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i-~Hpnv~ 80 (126)
.|.+||++|++++++++..++.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++ |||||+
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~ 85 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVY 85 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCC
Confidence 58899999999999998888765 7899999999999999999999999999999999999999999997 999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
. +|+||+ .+.|+|++++++++ ++++++|..|+.+.
T Consensus 86 ~-~G~iCl~iL~~~W~P~~~i~~vl------~si~~ll~~p~~~~ 123 (125)
T 2fo3_A 86 S-NGDICLSLLGDDYNPSLSISGLV------LSIISMLSSAKEKK 123 (125)
T ss_dssp T-TSBBCCGGGTTTCCTTCCHHHHH------HHHHHHHC------
T ss_pred C-CCEEEchhcCCCCCCCCcHHHHH------HHHHHHHhCccccc
Confidence 5 999999 78999999999997 99999999998764
No 5
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3.1e-37 Score=216.70 Aligned_cols=113 Identities=19% Similarity=0.403 Sum_probs=105.5
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 22 ~~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~ 101 (169)
T 1yrv_A 22 GRAYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVD 101 (169)
T ss_dssp CHHHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCccc
Confidence 678999999999999999888865 7899999999999999999999999999999999999999999999999994
Q ss_pred cccceeee---C--ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---G--GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~--~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
..+|+||+ . +.|+|+++++++| ++++++|..||.++.
T Consensus 102 ~~~G~ICL~iL~~~~~WsP~~ti~~vL------~sI~sll~~Pn~~~P 143 (169)
T 1yrv_A 102 PHTGQPCIDFLDNPEKWNTNYTLSSIL------LALQVMLSNPVLENP 143 (169)
T ss_dssp TTTCCBCCHHHHCGGGCCTTCCHHHHH------HHHHHHHTSCCTTSC
T ss_pred CCCCeEeehhhcCCcCCCCcCCHHHHH------HHHHHHHhCCCCCCc
Confidence 36999999 4 8999999999997 999999999998763
No 6
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-37 Score=214.79 Aligned_cols=114 Identities=25% Similarity=0.504 Sum_probs=105.4
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecc
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMY 75 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~ 75 (126)
|| +.|.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|
T Consensus 1 M~--~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 78 (165)
T 2ucz_A 1 MS--KTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSIL 78 (165)
T ss_dssp -C--HHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCS
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCc
Confidence 78 689999999999999999888875 48999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeee---C-------------ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 76 HPNIDEVSAVFYY---G-------------GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 76 Hpnv~~~~g~ic~---~-------------~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
||||+. +|+||+ . +.|+|+++++++| ++++++|..||.++.
T Consensus 79 HPNv~~-~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL------~si~~ll~~Pn~~~p 135 (165)
T 2ucz_A 79 HPNIYP-NGEVCISILHSPGDDPNMYELAEERWSPVQSVEKIL------LSVMSMLSEPNIESG 135 (165)
T ss_dssp CTTBCT-TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHH------HHHHHHHHSCCGGGC
T ss_pred cCCCCC-CCcEeehhhCCccccccccCCCCCCCCCcCcHHHHH------HHHHHHHhCCCCCCc
Confidence 999995 999999 1 6899999999997 999999999998753
No 7
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-36 Score=211.46 Aligned_cols=112 Identities=24% Similarity=0.487 Sum_probs=105.4
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 87 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVD 87 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCc
Confidence 578999999999999998888875 6899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
. +|.||+ .+.|+|++++.++| ++++++|.+||.++.
T Consensus 88 ~-~G~iCl~iL~~~W~p~~~i~~vL------~si~~ll~~pn~~~p 126 (156)
T 2e2c_A 88 Q-SGNICLDILKENWTASYDVRTIL------LSLQSLLGEPNNASP 126 (156)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHTTSCCCSSC
T ss_pred c-CceEECccccccCCCCCcHHHHH------HHHHHHHhCCCCCCH
Confidence 5 999999 78899999999997 999999999998763
No 8
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=9.6e-37 Score=210.75 Aligned_cols=113 Identities=27% Similarity=0.605 Sum_probs=106.5
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccccc
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNI 79 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 79 (126)
.+.|.+||++|+++|++++..++.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv 81 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNI 81 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceE
Confidence 3688999999999999999988876 799999999999999999999999999999999999999999999999999
Q ss_pred ccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 80 DEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 80 ~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
+. +|+||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 82 ~~-~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 121 (151)
T 4gpr_A 82 NK-NGVICLDILKDQWSPALTLSRVL------LSISSLLTDPNPSDP 121 (151)
T ss_dssp CT-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHCCCTTSC
T ss_pred CC-CCEEEcccccCCCCCCCcHHHHH------HHHHHHhcCCCCCCc
Confidence 95 999999 68999999999997 999999999998763
No 9
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=6.3e-37 Score=213.09 Aligned_cols=111 Identities=23% Similarity=0.482 Sum_probs=105.2
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
..+.+||++||++|++++..++.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 12 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 91 (158)
T 1zdn_A 12 PHIIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVG 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCC
Confidence 678999999999999999988876 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
. +|+||+ .+.|+|+++++++| ++++++|.+||.++
T Consensus 92 ~-~G~iCl~iL~~~W~p~~~i~~vL------~~i~~ll~~pn~~~ 129 (158)
T 1zdn_A 92 A-NGEICVNVLKRDWTAELGIRHVL------LTIKCLLIHPNPES 129 (158)
T ss_dssp T-TSBBCHHHHTTTCCTTCCHHHHH------HHHHHHHHSCCGGG
T ss_pred C-CCEEehhhcCCCCCCCCcHHHHH------HHHHHHHhCCCCCC
Confidence 5 899999 78999999999997 99999999999875
No 10
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=1.4e-36 Score=215.87 Aligned_cols=115 Identities=29% Similarity=0.556 Sum_probs=105.4
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecc
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMY 75 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~ 75 (126)
|++ +.+.+||++||++|++++..++.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|
T Consensus 3 m~~-~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 81 (183)
T 3rz3_A 3 MGS-PSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMW 81 (183)
T ss_dssp --C-CHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCC
T ss_pred Ccc-hHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCc
Confidence 554 578999999999999999988765 68999999999999999999999999999999999999999999999
Q ss_pred ccccccccceeee---C-------------ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 76 HPNIDEVSAVFYY---G-------------GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 76 Hpnv~~~~g~ic~---~-------------~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
||||+. +|+||+ . +.|+|++++++|| ++++++|.+||.++.
T Consensus 82 HPnV~~-~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~vL------~si~~ll~~Pn~~~p 138 (183)
T 3rz3_A 82 HPNIYE-TGDVCISILHPPVDDPQSGELPSERWNPTQNVRTIL------LSVISLLNEPNTFSP 138 (183)
T ss_dssp CTTBCT-TSBBCCTTC--------------CCCCTTCCHHHHH------HHHHHHHHSCCCSSC
T ss_pred cCCCCC-CCcEehhhcCcccccccccccccCCCCCcCcHHHHH------HHHHHHHhCCCCCCc
Confidence 999995 999999 2 7899999999997 999999999998764
No 11
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=1.6e-36 Score=211.19 Aligned_cols=113 Identities=25% Similarity=0.582 Sum_probs=103.9
Q ss_pred hhhhhHHHHHHHHHHhc---CCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccc
Q psy11956 5 SAGNRRMNIDVIKLIES---KHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHP 77 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~---~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hp 77 (126)
+.+.+||++|+++|+++ +..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 7 ~~a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 86 (159)
T 2bep_A 7 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHP 86 (159)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCcc
Confidence 78999999999999884 4566654 7899999999999999999999999999999999999999999999999
Q ss_pred ccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 78 NIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 78 nv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
||+..+|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 87 ni~~~~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 129 (159)
T 2bep_A 87 NISSVTGAICLDILKDQWAAAMTLRTVL------LSLQALLAAAEPDDP 129 (159)
T ss_dssp TBCTTTCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CCCCCCCEEeChhhhccCCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 99965899999 68899999999997 999999999998763
No 12
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=2.1e-36 Score=211.78 Aligned_cols=113 Identities=25% Similarity=0.610 Sum_probs=106.0
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccccc
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNI 79 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 79 (126)
.+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV 96 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNI 96 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTB
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcC
Confidence 4678999999999999999888875 789999999999999999999999999999999999999999999999999
Q ss_pred ccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 80 DEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 80 ~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
+. +|.||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 97 ~~-~G~ICl~iL~~~W~P~~ti~~vL------~si~~ll~~pn~~~P 136 (165)
T 2c4o_A 97 NS-NGSICLDILRSQWSPALTISKVL------LSICSLLCDPNPDDP 136 (165)
T ss_dssp CT-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CC-CCeEeehhhcCCCCCcCcHHHHH------HHHHHHHhCCCCCcc
Confidence 95 999999 68999999999997 999999999998763
No 13
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=2.8e-36 Score=210.92 Aligned_cols=112 Identities=22% Similarity=0.406 Sum_probs=105.0
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNI 79 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 79 (126)
+.|.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 2 ~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV 81 (164)
T 3h8k_A 2 GTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNI 81 (164)
T ss_dssp CHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCC
Confidence 578999999999999999988875 389999999999999999999999999999999999999999999999999
Q ss_pred ccccceeee---C-------------ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 80 DEVSAVFYY---G-------------GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 80 ~~~~g~ic~---~-------------~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
+ .+|+||+ . +.|+|+++++++| ++++++|..||.++.
T Consensus 82 ~-~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL------~~i~~ll~~pn~~~p 134 (164)
T 3h8k_A 82 Y-PDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKIL------LSVVSMLAEPNDESG 134 (164)
T ss_dssp C-TTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHH------HHHHHHHHSCCCSSC
T ss_pred C-CCCcEeeecccCcccccccccccccCCCCCCcHHHHH------HHHHHHHcCCCCCCc
Confidence 9 5999999 3 7899999999997 999999999998763
No 14
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-36 Score=211.50 Aligned_cols=112 Identities=26% Similarity=0.616 Sum_probs=105.5
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~ 99 (166)
T 2ayv_A 20 QGALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNIN 99 (166)
T ss_dssp TTHHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCC
Confidence 568999999999999999888876 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
. +|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 100 ~-~G~ICL~iL~~~WsP~~ti~~vL------~sI~sll~~pn~~~P 138 (166)
T 2ayv_A 100 S-QGAICLDILKDQWSPALTISKVL------LSISSLLTDPNPDDP 138 (166)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred C-CCeEEcccccccCCCCCcHHHHH------HHHHHHHhCCCCCch
Confidence 4 999999 78999999999997 999999999998763
No 15
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-36 Score=212.00 Aligned_cols=112 Identities=29% Similarity=0.595 Sum_probs=105.6
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~ 82 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNID 82 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCC
Confidence 678999999999999999888876 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---C----ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---G----GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~----~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
.+|.||+ . +.|+|+++++++| ++++++|..||.++.
T Consensus 83 -~~G~iCl~iL~~~~~~~W~p~~~i~~vL------~si~~ll~~p~~~~p 125 (169)
T 1yh2_A 83 -SAGRICLDVLKLPPKGAWRPSLNIATVL------TSIQLLMSEPNPDDP 125 (169)
T ss_dssp -TTCBBCCGGGSCTTTSCCCTTSCHHHHH------HHHHHHHHSCCTTSC
T ss_pred -cCCeEecccccCCcccCCCCCCcHHHHH------HHHHHHHhCCCCcch
Confidence 5999999 4 8999999999997 999999999998763
No 16
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=1.2e-36 Score=211.08 Aligned_cols=112 Identities=27% Similarity=0.571 Sum_probs=105.4
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|+|+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 83 (155)
T 1jat_A 4 ASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID 83 (155)
T ss_dssp CSCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC
T ss_pred HHHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC
Confidence 578899999999999999888876 6899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
.+|.||+ .+.|+|++++.++| ++++++|.+||.++.
T Consensus 84 -~~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 122 (155)
T 1jat_A 84 -RLGRICLDVLKTNWSPALQIRTVL------LSIQALLASPNPNDP 122 (155)
T ss_dssp -TTCCBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTST
T ss_pred -CCCEEEchhhccCCCCCCCHHHHH------HHHHHHHhCCCCCCc
Confidence 6999999 78999999999997 999999999998753
No 17
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=2e-36 Score=208.94 Aligned_cols=111 Identities=24% Similarity=0.601 Sum_probs=104.8
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
..+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 82 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 82 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCC
Confidence 568899999999999999888875 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
. +|.||+ .+.|+|++++.++| ++++++|.+||.++
T Consensus 83 ~-~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~pn~~~ 120 (150)
T 1z2u_A 83 S-NGSICLDILRSQWSPALTISKVL------LSICSLLCDPNPDD 120 (150)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTS
T ss_pred C-CCeEeeccccCCCCCCCCHHHHH------HHHHHHhhCCCCCC
Confidence 5 999999 68999999999997 99999999999876
No 18
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=2.4e-36 Score=211.11 Aligned_cols=113 Identities=24% Similarity=0.445 Sum_probs=105.1
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc----c-----CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeec
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL----K-----GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKM 74 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~----~-----~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i 74 (126)
+.+|.+||++|+++|++++..++.+ + |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|
T Consensus 8 ~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i 87 (163)
T 3rcz_B 8 SSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPL 87 (163)
T ss_dssp -CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCC
Confidence 4789999999999999999999876 3 889999999999999999999999999999999999999999999
Q ss_pred cccccccccceeee-----CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYY-----GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~-----~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|||||+ .+|+||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 88 ~HPnV~-~~G~iCl~iL~~~~~W~p~~ti~~vL------~~i~~ll~~P~~~~p 134 (163)
T 3rcz_B 88 FHPNVY-PSGTVCLSILNEEEGWKPAITIKQIL------LGIQDLLDDPNIASP 134 (163)
T ss_dssp CSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHH------HHHHHHHTSCCTTSC
T ss_pred ccCCCC-CCCcEeccccCCCCCcCCcCcHHHHH------HHHHHHHhCCCCCCc
Confidence 999999 5999999 24699999999997 999999999998763
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.4e-36 Score=214.99 Aligned_cols=112 Identities=22% Similarity=0.484 Sum_probs=104.7
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++||++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 29 ~~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 108 (179)
T 1i7k_A 29 GPVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVD 108 (179)
T ss_dssp -CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBC
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccc
Confidence 678899999999999998888865 6899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
. +|+||+ .+.|+|+++++++| ++++++|.+||.++.
T Consensus 109 ~-~G~ICL~iL~~~WsP~~ti~~vL------~sI~sll~~Pn~~~P 147 (179)
T 1i7k_A 109 T-QGNISLDILKEKWSALYDVRTIL------LSIQSLLGEPNIDSP 147 (179)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred c-CCeEEcccCcCcCCCCCCHHHHH------HHHHHHHhCCCCcch
Confidence 5 999999 78899999999997 999999999998763
No 20
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=3.5e-36 Score=211.89 Aligned_cols=112 Identities=27% Similarity=0.536 Sum_probs=101.7
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccc
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPN 78 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 78 (126)
.+.+.+||++||++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 15 ~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPN 94 (172)
T 2awf_A 15 VPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPN 94 (172)
T ss_dssp CCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCC
Confidence 4789999999999999999888875 58999999999999999999999999999999999999999999999999
Q ss_pred cccccceeee---C-------------ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 79 IDEVSAVFYY---G-------------GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 79 v~~~~g~ic~---~-------------~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
|+. +|+||+ . +.|+|+++++++| ++++++|..||.++
T Consensus 95 V~~-~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~vL------~sI~sll~~Pn~~~ 147 (172)
T 2awf_A 95 VDK-NGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIM------ISVISMLADPNGDS 147 (172)
T ss_dssp BCT-TCBBCCGGGSCC---------CTTSCCTTCCHHHHH------HHHHHHHSCC----
T ss_pred CCC-CCcEehhhcCCcccccccccccCCCCCCcCcHHHHH------HHHHHHHHCcCCCC
Confidence 995 899999 2 6899999999997 99999999999875
No 21
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=2.3e-36 Score=210.06 Aligned_cols=114 Identities=25% Similarity=0.434 Sum_probs=104.0
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccc---------cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEe
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTL---------KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFM 71 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~---------~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~ 71 (126)
|| +.+.+||++|+++|++++..++.+ +|+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 1 Ms--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 78 (157)
T 2gjd_A 1 MS--SLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFP 78 (157)
T ss_dssp ----CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECC
T ss_pred CC--hHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeecc
Confidence 77 678999999999999999988875 2789999999999999999999999999999999999999999
Q ss_pred eeccccccccccceeee---Cc--eeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 72 NKMYHPNIDEVSAVFYY---GG--VWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 72 t~i~Hpnv~~~~g~ic~---~~--~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|++|||||+ .+|+||+ .. .|+|+++++++| ++++++|.+||.++.
T Consensus 79 t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 128 (157)
T 2gjd_A 79 AGFYHPNVY-PSGTICLSILNEDQDWRPAITLKQIV------LGVQDLLDSPNPNSP 128 (157)
T ss_dssp TTCCCTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHH------HHHHHHHTSCCTTCC
T ss_pred CCCccCCCC-CCCcEeeecccCCCCCCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 999999999 5999999 33 799999999997 999999999998763
No 22
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=1.9e-36 Score=208.81 Aligned_cols=110 Identities=28% Similarity=0.604 Sum_probs=103.4
Q ss_pred hhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccccc
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 82 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~~ 82 (126)
+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~- 80 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK- 80 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC-
Confidence 4699999999999999888875 78999999999999999999999999999999999999999999999999995
Q ss_pred cceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 83 SAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 83 ~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
+|+||+ .+.|+|+++++++| ++++++|.+||.++.
T Consensus 81 ~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 118 (149)
T 2r0j_A 81 LGRICLDILKDKWSPALQIRTVL------LSIQALLSSPEPDDP 118 (149)
T ss_dssp TCBBCCGGGTTTCCTTSCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CCEEechhcCCCCCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 899999 78999999999997 999999999998763
No 23
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=4.8e-36 Score=204.06 Aligned_cols=109 Identities=17% Similarity=0.414 Sum_probs=102.3
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeec-ccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKM-YHPNI 79 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i-~Hpnv 79 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv 98 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHV 98 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTB
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcC
Confidence 478899999999999998888765 7899999999999999999999999999999999999999999996 99999
Q ss_pred ccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCC
Q psy11956 80 DEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNI 120 (126)
Q Consensus 80 ~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~ 120 (126)
+. +|+||+ .+.|+|+++++++| ++++++|..|+.
T Consensus 99 ~~-~G~ICl~iL~~~WsP~~ti~~vL------~si~sll~~p~~ 135 (136)
T 2h2y_A 99 YS-NGDICLSVLGDDYNPSLSISGLI------LSIISMLSSAKE 135 (136)
T ss_dssp CT-TCCBCCGGGTTTCCTTCCHHHHH------HHHHHHHSSSCC
T ss_pred CC-CCEEECccccCCCCCCCcHHHHH------HHHHHHHhCcCc
Confidence 95 999999 78999999999997 999999998874
No 24
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=2.1e-36 Score=208.66 Aligned_cols=111 Identities=28% Similarity=0.587 Sum_probs=103.5
Q ss_pred hhhHHHHHHHHHHhcCCCcccc----c-CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccccccc
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTL----K-GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 81 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~----~-~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~ 81 (126)
+.+||++|+++|++++..++.+ + |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 4799999999999998888875 4 8999999999999999999999999999999999999999999999999995
Q ss_pred ccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 82 VSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 82 ~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
.+|.||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 120 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSAL------ISLQALLQSPEPNDP 120 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHH------HHHHHHHHSCCSSSC
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 5999999 68899999999997 999999999998753
No 25
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=4e-36 Score=218.07 Aligned_cols=113 Identities=22% Similarity=0.496 Sum_probs=106.3
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 22 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 101 (216)
T 2pwq_A 22 SKELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNIS 101 (216)
T ss_dssp CHHHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCc
Confidence 678999999999999999888876 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
..+|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 102 ~~~G~ICL~iL~~~WsP~~ti~~VL------~sI~sLL~~Pnp~dP 141 (216)
T 2pwq_A 102 SQTGAICLDVLKNEWSPALTIRTAL------LSIQALLSDPQPDDP 141 (216)
T ss_dssp TTTCBBCCHHHHHHCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CCCCEEEchhhcccCCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 65899999 67899999999997 999999999998763
No 26
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=5.2e-36 Score=209.04 Aligned_cols=114 Identities=23% Similarity=0.441 Sum_probs=104.9
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccc---------cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEe
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTL---------KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFM 71 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~---------~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~ 71 (126)
|| +.+.+||++|+++|++++..++.+ +|++.|+++|.||++|+|+||.|+++|.||++||++||+|+|.
T Consensus 4 M~--~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~ 81 (161)
T 2grr_A 4 MS--GIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFE 81 (161)
T ss_dssp CC--HHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEES
T ss_pred cc--HHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEe
Confidence 56 678999999999999999888764 3788999999999999999999999999999999999999999
Q ss_pred eeccccccccccceeee---C--ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 72 NKMYHPNIDEVSAVFYY---G--GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 72 t~i~Hpnv~~~~g~ic~---~--~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|++|||||+ .+|.||+ . +.|+|+++++++| ++++++|.+||.++.
T Consensus 82 t~i~HPnv~-~~G~iCl~iL~~~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 131 (161)
T 2grr_A 82 PPLFHPNVY-PSGTVCLSILEEDKDWRPAITIKQIL------LGIQELLNEPNIQSP 131 (161)
T ss_dssp SCCCSTTBC-TTSBBCCGGGCTTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred cCcccCCCC-CCCeEeehhcCCCCCcCCCCcHHHHH------HHHHHHHhCCCCCCc
Confidence 999999999 5999999 2 4899999999997 999999999998763
No 27
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=5.2e-36 Score=215.63 Aligned_cols=115 Identities=25% Similarity=0.591 Sum_probs=104.0
Q ss_pred CCCchhhhhHHHHHHHHHHhcC---CCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeee
Q psy11956 1 MSSASAGNRRMNIDVIKLIESK---HEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~---~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
|| +.|.+||++||++|+++. ..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 2 Ms--~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~ 79 (201)
T 3k9o_A 2 MA--NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 79 (201)
T ss_dssp ----CTTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSC
T ss_pred Cc--HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccC
Confidence 77 679999999999998762 456654 789999999999999999999999999999999999999999999
Q ss_pred ccccccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 74 MYHPNIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 74 i~Hpnv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
||||||+..+|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 80 i~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL------~~i~~ll~~p~p~~p 126 (201)
T 3k9o_A 80 IWHPNISSVTGAICLDILKDQWAAAMTLRTVL------LSLQALLAAAEPDDP 126 (201)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred cccCCCcCCCCeeeCcccccCCCCCCCHHHHH------HHHHHHhcCCCCCCc
Confidence 999999955899999 68999999999997 999999999998763
No 28
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.4e-36 Score=211.56 Aligned_cols=117 Identities=58% Similarity=0.972 Sum_probs=101.3
Q ss_pred CCCchhhhhHHHHHHHHHHhcCCCcccccCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 1 MSSASAGNRRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
||+.+++.+||++|+++|++........+|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 20 ms~~~~a~~RL~kEl~~l~~~g~~v~~~ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 20 MSSPSPGKRRMDTDVIKLIESKHEVTILGGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp ---CCHHHHHHHHHHHHHHHSSSCEEEEEETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred CCCchHHHHHHHHHHHhcCcCCCEEEECCCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 66656799999999999986432211127889999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeee-eeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIG-FMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~-~~~~l~~pn~~~~ 123 (126)
..+|.||+ .+.|+|+++++++| ++ ++++|..||.++.
T Consensus 100 ~~~G~ICL~iL~~~WsP~~ti~~iL------~s~I~~Ll~~Pn~~~p 140 (179)
T 2z5d_A 100 EASGTVCLDVINQTWTALYDLTNIF------ESFLPQLLAYPNPIDP 140 (179)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTTHHH------HTHHHHHHHSCCCSSC
T ss_pred CCCCeEeccccccCCCCCCCHHHHH------HHHHHHHHhCCCCCCc
Confidence 55999999 68999999999997 88 8899999998763
No 29
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=1.8e-35 Score=211.71 Aligned_cols=112 Identities=21% Similarity=0.468 Sum_probs=105.3
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++||++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~ 126 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNIN 126 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceEC
Confidence 568899999999999998888875 7999999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
. +|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 127 ~-~G~ICL~iL~~~WsP~~ti~~vL------~sI~~ll~~pnp~~P 165 (194)
T 3bzh_A 127 S-QGVICLDILKDNWSPALTISKVL------LSICSLLTDCNPADP 165 (194)
T ss_dssp T-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred C-CCceechhhhccCCCcCcHHHHH------HHHHHHHhCCCCccc
Confidence 5 999999 78999999999997 999999999998753
No 30
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.1e-36 Score=204.86 Aligned_cols=115 Identities=17% Similarity=0.307 Sum_probs=99.7
Q ss_pred CCCchhhhhHHHHHHHHHHhc-CCCcccc-----c--CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEee
Q psy11956 1 MSSASAGNRRMNIDVIKLIES-KHEGTTL-----K--GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMN 72 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~-~~~~~~~-----~--~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t 72 (126)
||+ .++.+||++|+++|+++ +..++.+ + |+++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|
T Consensus 2 m~~-~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 80 (138)
T 1jat_B 2 MSK-VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFIS 80 (138)
T ss_dssp -CC-CCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESB
T ss_pred cch-HHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEc
Confidence 664 57889999999999987 6777654 2 3889999999999999999999999999999999999999999
Q ss_pred ecccccccccccee--ee--CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 73 KMYHPNIDEVSAVF--YY--GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 73 ~i~Hpnv~~~~g~i--c~--~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
+||||||+..+|.| |+ -+.|+|++++++++ ++++++|.+||.++
T Consensus 81 ~i~HPnv~~~~G~i~~cL~~l~~W~p~~~i~~vl------~~i~~ll~~pn~~~ 128 (138)
T 1jat_B 81 KINLPCVNPTTGEVQTDFHTLRDWKRAYTMETLL------LDLRKEMATPANKK 128 (138)
T ss_dssp CCCCTTBCTTTCBBCTTSHHHHTCCTTCCHHHHH------HHHHHHHTSHHHHT
T ss_pred ccccCCEeCCCCEEeeecccCCCCCCcCcHHHHH------HHHHHHHcCCCCCC
Confidence 99999999644999 88 36899999999997 99999999988654
No 31
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-35 Score=212.19 Aligned_cols=113 Identities=19% Similarity=0.480 Sum_probs=101.6
Q ss_pred hhhhhHHHHHHHHHHhcCC-------------Ccccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCc
Q psy11956 5 SAGNRRMNIDVIKLIESKH-------------EGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPS 67 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~-------------~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~ 67 (126)
..+.+||++||++|++++. .++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+
T Consensus 31 ~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~ 110 (193)
T 2f4z_A 31 PREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPK 110 (193)
T ss_dssp -CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred CHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCe
Confidence 4578999999999999876 56664 789999999999999999999999999999999999999
Q ss_pred eeEeeeccccccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 68 IGFMNKMYHPNIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 68 v~f~t~i~Hpnv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|+|.|+||||||+..+|.||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 111 V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL------~sI~sll~~pnp~~P 163 (193)
T 2f4z_A 111 MKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTAL------LSIQAMLADPVPTDP 163 (193)
T ss_dssp EEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHH------HHHHHHHHSCCTTSC
T ss_pred EEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHH------HHHHHHHhCCCCCCc
Confidence 999999999999955899999 67899999999997 999999999998763
No 32
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.6e-35 Score=200.41 Aligned_cols=102 Identities=19% Similarity=0.426 Sum_probs=94.3
Q ss_pred hhhHHHHHHHHHHhcCCCccc--c----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecc--ccc
Q psy11956 7 GNRRMNIDVIKLIESKHEGTT--L----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMY--HPN 78 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~--~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~--Hpn 78 (126)
+.+||++|+++|++++..++. + +|+++|+++|.||++||||||.|+++|.||++||++||+|+|.|++| |||
T Consensus 23 ~~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPN 102 (136)
T 2a7l_A 23 MQKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPH 102 (136)
T ss_dssp SCHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCcc
Confidence 359999999999999888876 2 68999999999999999999999999999999999999999999998 999
Q ss_pred cccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccC
Q psy11956 79 IDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKM 115 (126)
Q Consensus 79 v~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l 115 (126)
|+. +|+||+ .+.|+|+++++++| ++++++|
T Consensus 103 V~~-~G~ICL~iL~~~WsP~~ti~~vL------~sI~slL 135 (136)
T 2a7l_A 103 VYS-NGHICLSILTEDWSPALSVQSVC------LSIISML 135 (136)
T ss_dssp BCT-TCBBCCGGGTTTCCTTSCHHHHH------HHHHHHT
T ss_pred CCC-CCeEEchhcCCCCCCCCcHHHHH------HHHHHHh
Confidence 995 999999 78999999999997 8877765
No 33
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=4.6e-35 Score=203.89 Aligned_cols=113 Identities=16% Similarity=0.277 Sum_probs=101.6
Q ss_pred hhhhhHHHHHHHHHHhcCCCc-ccc-----cC--cccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEG-TTL-----KG--LKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYH 76 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~-~~~-----~~--~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 76 (126)
.++.+||++|+++|++++.++ +.+ +| +++|+++|.||++|+||||.|+++|.||++||++||+|+|.|++||
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 103 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 103 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCcee
Confidence 678999999999999988777 332 33 8899999999999999999999999999999999999999999999
Q ss_pred cccccccceeee---C--ceeeEEEEeCCCCCCCCCeeeeeccCC-CCCCCCC
Q psy11956 77 PNIDEVSAVFYY---G--GVWKVRVHLPEHYPFKSPSIGFMNKMY-HPNIDEV 123 (126)
Q Consensus 77 pnv~~~~g~ic~---~--~~w~p~~~~~~ilp~~~p~~~~~~~l~-~pn~~~~ 123 (126)
|||+..+|+||+ . +.|+|+++++++| ++++++|. .||.++.
T Consensus 104 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL------~sI~~ll~~~pn~~~P 150 (160)
T 2a4d_A 104 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVL------QELRRLMMSKENMKLP 150 (160)
T ss_dssp TTBCTTTCBBCGGGSHHHHTCCTTCCHHHHH------HHHHHHHTSTTTTTCC
T ss_pred CCEECCCCEEehhhcCCccCCCccCcHHHHH------HHHHHHHccCCCCCCC
Confidence 999955899997 3 8999999999997 99999985 6887753
No 34
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=4.9e-35 Score=206.05 Aligned_cols=114 Identities=20% Similarity=0.353 Sum_probs=101.8
Q ss_pred chhhhhHHHHHHHHHHh-c-C------CC---ccc-----ccCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCc
Q psy11956 4 ASAGNRRMNIDVIKLIE-S-K------HE---GTT-----LKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPS 67 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~-~-~------~~---~~~-----~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~ 67 (126)
.+.+.+||++||++|++ . + .. ++. .+|++.|+++|.||++|||+||.|+++|.||++||++||+
T Consensus 4 s~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~ 83 (172)
T 2y9m_A 4 ADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPK 83 (172)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCE
T ss_pred cHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCE
Confidence 37899999999999988 5 3 22 232 2689999999999999999999999999999999999999
Q ss_pred eeEee-eccccccccccceeee---C-ceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 68 IGFMN-KMYHPNIDEVSAVFYY---G-GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 68 v~f~t-~i~Hpnv~~~~g~ic~---~-~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|+|.| +||||||+..+|.||+ . +.|+|+++++++| ++++++|.+||.++.
T Consensus 84 v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL------~si~~ll~~p~~~~p 138 (172)
T 2y9m_A 84 ISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCV------HAVWRLLREPVCDSP 138 (172)
T ss_dssp EEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred EEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHH------HHHHHHHhCCCCCCc
Confidence 99999 9999999645899999 4 8999999999997 999999999998763
No 35
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=6.2e-35 Score=216.03 Aligned_cols=113 Identities=25% Similarity=0.582 Sum_probs=104.2
Q ss_pred hhhhhHHHHHHHHHHhc---CCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccc
Q psy11956 5 SAGNRRMNIDVIKLIES---KHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHP 77 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~---~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hp 77 (126)
+.+.+||++||++|+++ +..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 56 ~~a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 135 (253)
T 3e46_A 56 NIAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHP 135 (253)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBT
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccC
Confidence 68999999999999876 3456654 7899999999999999999999999999999999999999999999999
Q ss_pred ccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 78 NIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 78 nv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
||+..+|.||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 136 NV~~~~G~ICL~iL~~~WsP~~ti~~vL------~sI~~ll~~pnp~~P 178 (253)
T 3e46_A 136 NISSVTGAICLDILKDQWAAAMTLRTVL------LSLQALLAAAEPDDP 178 (253)
T ss_dssp TBCTTTCBBCCGGGTTCCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CccCCCCeeecccccCCCCCCCCHHHHH------HHHHHHhcCCCCCCh
Confidence 99955899999 78999999999997 999999999998763
No 36
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=1.2e-35 Score=215.44 Aligned_cols=112 Identities=28% Similarity=0.586 Sum_probs=103.7
Q ss_pred hhhhHHHHHHHHHHhcCCCcccc----c-CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 6 AGNRRMNIDVIKLIESKHEGTTL----K-GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~~~~~~~~~----~-~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
.+.+||++|+++|++++..++.+ + ++..|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 57899999999999999888876 3 456999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
..+|.||+ .+.|+|++++.++| ++++++|..||.++.
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL------~sI~sLL~~Pnp~~P 121 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSAL------ISLQALLQSPEPNDP 121 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHH------HHHHHHHTSCCCSSC
T ss_pred CCCCEEECccCCCCCCCcCcHHHHH------HHHHHHHhCCCCCCc
Confidence 55999999 78999999999997 999999999998763
No 37
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=1.8e-34 Score=200.25 Aligned_cols=111 Identities=15% Similarity=0.299 Sum_probs=101.0
Q ss_pred hhhhhHHHHHHHHHHhc-CCCcccc-----c--CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccc
Q psy11956 5 SAGNRRMNIDVIKLIES-KHEGTTL-----K--GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYH 76 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~-~~~~~~~-----~--~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 76 (126)
.++.+||++|+++|+++ +..++.+ + |++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||
T Consensus 20 ~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~H 99 (156)
T 2q0v_A 20 VPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEM 99 (156)
T ss_dssp CCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCC
T ss_pred chHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEccccc
Confidence 67899999999999988 6777654 2 48899999999999999999999999999999999999999999999
Q ss_pred ccccccccee---ee--CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 77 PNIDEVSAVF---YY--GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 77 pnv~~~~g~i---c~--~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
|||+. +|+| |+ -+.|+|+++++++| ++++++|..||.++
T Consensus 100 PNV~~-~G~icisCL~iL~~WsP~~ti~~vL------~sI~~ll~~Pn~~~ 143 (156)
T 2q0v_A 100 SCVDN-CGRVIKNNLHILKNWNRNYTIETIL------ISLRQEMLSSANKR 143 (156)
T ss_dssp TTBCT-TSBBCGGGSHHHHTCCTTCCHHHHH------HHHHHHTTSTTTTT
T ss_pred CCCcc-CCeEehhhcccccCCCCcCcHHHHH------HHHHHHHhCCCCCC
Confidence 99995 8999 77 34699999999997 99999999999775
No 38
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=1e-34 Score=204.27 Aligned_cols=111 Identities=39% Similarity=0.705 Sum_probs=100.1
Q ss_pred hhhhHHHHHHHHHHhcCCCcccc-cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccccccc
Q psy11956 6 AGNRRMNIDVIKLIESKHEGTTL-KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSA 84 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~~~~~~~~~-~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~~~g 84 (126)
.+.+||++|+++|++++.. +.. +|++.|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 12 ~~~~RL~~El~~l~~~~~~-v~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G 90 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTRK-VYPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSG 90 (171)
T ss_dssp -CCHHHHHHHHHHHSSSSC-EEECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTC
T ss_pred cHHHHHHHHHHHHHhCCCC-CCCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCC
Confidence 6789999999999988753 333 89999999999999999999999999999999999999999999999999995589
Q ss_pred eeee---CceeeEEEEeCCCCCCCCCeeee-eccCCCCCCCCC
Q psy11956 85 VFYY---GGVWKVRVHLPEHYPFKSPSIGF-MNKMYHPNIDEV 123 (126)
Q Consensus 85 ~ic~---~~~w~p~~~~~~ilp~~~p~~~~-~~~l~~pn~~~~ 123 (126)
.||+ .+.|+|+++++++| +++ +++|..||.++.
T Consensus 91 ~iCl~iL~~~W~p~~~i~~vL------~sil~~ll~~Pn~~~p 127 (171)
T 1yf9_A 91 SVCLDVINQTWTPMYQLENIF------DVFLPQLLRYPNPSDP 127 (171)
T ss_dssp BBCHHHHHHHCCTTCCTHHHH------HTHHHHHHHSCCSSCC
T ss_pred eEeccccccCCCCCCcHHHHH------HHHHHHHHhCCCCCCc
Confidence 9999 68999999999997 887 588889998763
No 39
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=5.9e-35 Score=202.02 Aligned_cols=112 Identities=38% Similarity=0.645 Sum_probs=98.3
Q ss_pred hhhhHHHHHHHHHHhcCCCccc-ccCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccccccc
Q psy11956 6 AGNRRMNIDVIKLIESKHEGTT-LKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSA 84 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~~~~~~~~-~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~~~g 84 (126)
.+.+||++|+++|+++...... .+|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+..+|
T Consensus 2 sa~~Rl~kEl~~l~~~~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G 81 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMAGYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASG 81 (152)
T ss_dssp -CCCHHHHTHHHHHHHTCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTC
T ss_pred hHHHHHHHHHHhcCcCCCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCC
Confidence 4789999999999886432111 278999999999999999999999999999999999999999999999999995589
Q ss_pred eeee---CceeeEEEEeCCCCCCCCCeee-eeccCCCCCCCCC
Q psy11956 85 VFYY---GGVWKVRVHLPEHYPFKSPSIG-FMNKMYHPNIDEV 123 (126)
Q Consensus 85 ~ic~---~~~w~p~~~~~~ilp~~~p~~~-~~~~l~~pn~~~~ 123 (126)
.||+ .+.|+|+++++++| .+ ++++|.+||.++.
T Consensus 82 ~iCl~il~~~W~p~~~i~~vl------~~ii~~Ll~~Pn~~~P 118 (152)
T 2onu_A 82 SVCLDVINQTWTPLYSLVNVF------EVFLPQLLTYPNPSDP 118 (152)
T ss_dssp BBCHHHHHHHCCTTCCHHHHH------HTHHHHHHHSCCCSSC
T ss_pred eEecccccccCCCCCCHHHHH------HHHHHHHHhCCCCCCc
Confidence 9999 68899999999996 77 5688889998763
No 40
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.3e-34 Score=200.77 Aligned_cols=110 Identities=25% Similarity=0.433 Sum_probs=102.6
Q ss_pred hhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 6 AGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
.+.+||++|+++|++++..++.+ +|++.|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 47899999999999998888765 68999999999 9999999999999999999999999999999999999999
Q ss_pred cccceeee----CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY----GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~----~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
. +|.||+ .+.|+|+++++++| ++++++|.+||.++.
T Consensus 83 ~-~G~iCl~iL~~~~W~p~~~i~~vl------~~i~~ll~~p~~~~p 122 (155)
T 1wzv_A 83 E-NGQICLPIISSENWKPCTKTCQVL------EALNVLVNRPNIREP 122 (155)
T ss_dssp T-TCBCCCGGGCTTTCCTTCCHHHHH------HHHHHHHHSCCSSSC
T ss_pred C-CCeEeecCCCccCCCCCCcHHHHH------HHHHHHHhCCCCCch
Confidence 5 999999 48999999999997 999999999998763
No 41
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.6e-34 Score=200.70 Aligned_cols=111 Identities=20% Similarity=0.380 Sum_probs=102.2
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccc
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPN 78 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 78 (126)
.+.+.+||++||++|++++..++.+ +|+..|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 12 ~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 90 (167)
T 3fn1_B 12 VSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPN 90 (167)
T ss_dssp CCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSS
T ss_pred hhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCC
Confidence 3689999999999999999888765 5788999998 899999999999999999999999999999999999999
Q ss_pred cccccceeee---C------ceeeEEEEeCCCCCCCCCeeeeeccCCC-CCCCC
Q psy11956 79 IDEVSAVFYY---G------GVWKVRVHLPEHYPFKSPSIGFMNKMYH-PNIDE 122 (126)
Q Consensus 79 v~~~~g~ic~---~------~~w~p~~~~~~ilp~~~p~~~~~~~l~~-pn~~~ 122 (126)
|+ .+|+||+ . +.|+|+++++++| ++++++|.. ||.++
T Consensus 91 v~-~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl------~~i~~ll~~~pn~~~ 137 (167)
T 3fn1_B 91 IT-ETGEICLSLLREHSIDGTGWAPTRTLKDVV------WGLNSLFTDLLNFDD 137 (167)
T ss_dssp BC-TTCCBCCGGGSBCSSSTTSBCTTCCHHHHH------HHHHHTTTTTCCSSS
T ss_pred CC-CCCEEechhhccCCCCCCCCCCcCcHHHHH------HHHHHHHcCCCCCCc
Confidence 99 5999999 2 3799999999997 999999998 68875
No 42
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.98 E-value=1.6e-34 Score=202.97 Aligned_cols=112 Identities=17% Similarity=0.292 Sum_probs=100.6
Q ss_pred hhhhhHHHHHHHHHHhcCCCcc-cc-----cC--cccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGT-TL-----KG--LKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYH 76 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~-~~-----~~--~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~H 76 (126)
.++.+||++||++|++++.+++ .+ +| +++|+++|.||++|+|+||.|+++|.||++||++||+|+|.|+|||
T Consensus 34 ~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~H 113 (170)
T 2hlw_A 34 VPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINM 113 (170)
T ss_dssp CCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCC
T ss_pred CHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEeccccc
Confidence 4689999999999999887773 22 33 8899999999999999999999999999999999999999999999
Q ss_pred cccccccceeee---C--ceeeEEEEeCCCCCCCCCeeeeeccCC-CCCCCC
Q psy11956 77 PNIDEVSAVFYY---G--GVWKVRVHLPEHYPFKSPSIGFMNKMY-HPNIDE 122 (126)
Q Consensus 77 pnv~~~~g~ic~---~--~~w~p~~~~~~ilp~~~p~~~~~~~l~-~pn~~~ 122 (126)
|||+..+|.||+ . +.|+|+++++++| ++++++|. .||.++
T Consensus 114 PNV~~~~G~ICl~iL~~~~~WsP~~ti~~vL------~sI~~ll~~~pn~~~ 159 (170)
T 2hlw_A 114 NGVNSSNGVVDPRAISVLAKWQNSYSIKVVL------QELRRLMMSKENMKL 159 (170)
T ss_dssp SSBCSSSCBBCTTTCHHHHTCCSSCCHHHHH------HHHHHHHHSTTTSSS
T ss_pred CCEeCCCCEEEhhhcCCCCCCCccCcHHHHH------HHHHHHHccCCCCCC
Confidence 999855999996 4 8999999999997 99999986 588765
No 43
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.98 E-value=1.3e-34 Score=200.64 Aligned_cols=108 Identities=24% Similarity=0.521 Sum_probs=100.1
Q ss_pred hhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccccccc
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 81 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~ 81 (126)
|.+||++|+++|++++..++.+ +|++.|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 81 (154)
T 1c4z_D 3 ASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE 81 (154)
T ss_dssp -CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC
Confidence 7899999999999998888753 68999999998 99999999999999999999999999999999999999995
Q ss_pred ccceeee----CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 82 VSAVFYY----GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 82 ~~g~ic~----~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
+|.||+ .+.|+|+++++++| ++++++|.+||.++
T Consensus 82 -~G~iCl~iL~~~~W~p~~~i~~vl------~~i~~ll~~p~~~~ 119 (154)
T 1c4z_D 82 -KGQVCLPVISAENWKPATKTDQVI------QSLIALVNDPQPEH 119 (154)
T ss_dssp -TCBBCCTTTSSSSCCTTCCHHHHH------HHHHHHHHSCCCSS
T ss_pred -CCEEECCCCCCCCCCCCCcHHHHH------HHHHHHHcCCCCCc
Confidence 999999 37999999999997 99999999999875
No 44
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.98 E-value=4.4e-34 Score=199.11 Aligned_cols=109 Identities=22% Similarity=0.396 Sum_probs=99.2
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeecccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNI 79 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv 79 (126)
+.+.+||++|+++| ++..++.+ +|++.|+++| ||++|+|+||.|+++|.||++||++||+|+|.|++|||||
T Consensus 5 ~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv 81 (160)
T 1y8x_A 5 SAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNI 81 (160)
T ss_dssp CHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTB
T ss_pred cHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcC
Confidence 47899999999999 34555543 6899999988 9999999999999999999999999999999999999999
Q ss_pred ccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 80 DEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 80 ~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
+. +|.||+ .+.|+|+++++++| ++++++|.+||.++.
T Consensus 82 ~~-~G~iCl~iL~~~W~p~~~i~~vL------~~i~~ll~~Pn~~~p 121 (160)
T 1y8x_A 82 DL-EGNVCLNILREDWKPVLTINSII------YGLQYLFLEPNPEDP 121 (160)
T ss_dssp CT-TCBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCCSSC
T ss_pred CC-CCeEEcccchhhccCCCCHHHHH------HHHHHHHhCCCCCCc
Confidence 95 899999 68999999999997 999999999998763
No 45
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=9e-34 Score=200.84 Aligned_cols=110 Identities=23% Similarity=0.395 Sum_probs=100.1
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc-----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccc
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL-----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPN 78 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~-----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpn 78 (126)
.+.+.+||++|+++| ++..++.+ +|++.|+++| ||++|||+||.|+++|.||++||++||+|+|.|++||||
T Consensus 24 ~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPN 100 (180)
T 2nvu_C 24 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 100 (180)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCC
Confidence 367899999999999 45556543 7899999988 999999999999999999999999999999999999999
Q ss_pred cccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 79 IDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 79 v~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
|+. +|.||+ .+.|+|+++++++| ++++++|.+||.++.
T Consensus 101 V~~-~G~iCl~iL~~~W~p~~~i~~vL------~si~~ll~~Pn~~~p 141 (180)
T 2nvu_C 101 IDL-EGNVALNILREDWKPVLTINSII------YGLQYLFLEPNPEDP 141 (180)
T ss_dssp BCT-TSBBCCGGGTTSCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CCC-CCcEEcccccccCCCCCCHHHHH------HHHHHHHhCCCCCCc
Confidence 995 999999 68999999999997 999999999998763
No 46
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.97 E-value=7.5e-34 Score=199.14 Aligned_cols=99 Identities=21% Similarity=0.470 Sum_probs=90.9
Q ss_pred CCCchhhhhHHHHHHHHHHhcC------------CCcccc----cCcccEEEEEECCCCCCCC--CCEEEEEEEcCCCCC
Q psy11956 1 MSSASAGNRRMNIDVIKLIESK------------HEGTTL----KGLKEFCVKFFGPRDTPYE--GGVWKVRVHLPEHYP 62 (126)
Q Consensus 1 Ms~~~~~~~RL~~e~~~l~~~~------------~~~~~~----~~~~~w~~~i~gp~~t~y~--gg~f~~~i~~p~~yP 62 (126)
|| +.+.+||++|+++|++++ ..++.+ +|+++|+++|.||++|+|+ ||.|+++|.||++||
T Consensus 5 Ms--~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP 82 (167)
T 4ds2_A 5 MK--NISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYP 82 (167)
T ss_dssp CC--CCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTT
T ss_pred cc--HHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCC
Confidence 77 679999999999999876 455544 8999999999999999999 999999999999999
Q ss_pred CCCCceeEeeeccccccccccceeee---CceeeEEEEeCCCC
Q psy11956 63 FKSPSIGFMNKMYHPNIDEVSAVFYY---GGVWKVRVHLPEHY 102 (126)
Q Consensus 63 ~~pP~v~f~t~i~Hpnv~~~~g~ic~---~~~w~p~~~~~~il 102 (126)
++||+|+|.|++|||||+ .+|.||+ .+.|+|++++++++
T Consensus 83 ~~pP~v~f~t~i~HPnv~-~~G~iCl~il~~~W~p~~~i~~vl 124 (167)
T 4ds2_A 83 HEPPTVRFVTPVYSPLVT-GEGGICDRMVNDFWTPDQHASDVI 124 (167)
T ss_dssp TSCCEEEESSCCCCSSCC-TTSCCCTHHHHTTCCTTSCHHHHH
T ss_pred CCCCEEEEeCCcccccCC-CCCEEEcccCcCCCCCCCChHHHH
Confidence 999999999999999999 5999999 68999999998864
No 47
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.97 E-value=1.2e-32 Score=215.45 Aligned_cols=112 Identities=24% Similarity=0.606 Sum_probs=106.1
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.|.+||++|+++|++++..++.+ +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 s~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 81 (399)
T 4ddg_A 2 AMALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNIN 81 (399)
T ss_dssp HHHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccC
Confidence 578999999999999999999876 7899999999999999999999999999999999999999999999999999
Q ss_pred cccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 81 EVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 81 ~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
. +|.||+ .+.|+|+++++++| ++++++|..||+++.
T Consensus 82 ~-~G~iCl~il~~~W~p~~~i~~vL------~~i~~ll~~pnp~~p 120 (399)
T 4ddg_A 82 S-NGSISLDILRSQWSPALTISKVL------LSICSLLCDPNPDDP 120 (399)
T ss_dssp T-TCBBCCGGGTTSCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred C-CCeEeCcccccCCCccccHHHHH------HHHHHHHcCCCCCch
Confidence 5 999999 78999999999997 999999999998863
No 48
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.97 E-value=2.4e-32 Score=194.53 Aligned_cols=108 Identities=19% Similarity=0.404 Sum_probs=97.5
Q ss_pred hhhhhHHHHHHHHHHhcCCCcccc----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeeeccccccc
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTTL----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 80 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~ 80 (126)
+.+.+||++|+++|++++..++.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ |+|++
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~ 90 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFK 90 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBC
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceec
Confidence 568899999999999999888865 789999999999999999999999999999999999999999999 89998
Q ss_pred cccceeee------CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCC
Q psy11956 81 EVSAVFYY------GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNID 121 (126)
Q Consensus 81 ~~~g~ic~------~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~ 121 (126)
.+|+||+ .+.|+|++++.++| ++++++|..||.+
T Consensus 91 -~~G~ICL~iL~~~~~~W~P~~ti~~vL------~si~sll~~p~p~ 130 (187)
T 2f4w_A 91 -CNTRLCLSITDFHPDTWNPAWSVSTIL------TGLLSFMVEKGPT 130 (187)
T ss_dssp -TTSCBC----------CCTTCCHHHHH------HHHHHHHHSCCCC
T ss_pred -cCCeEeeeccccCccCCCCcCcHHHHH------HHHHHHhcCCCCC
Confidence 4899999 27899999999997 9999999999876
No 49
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.97 E-value=8.6e-32 Score=204.58 Aligned_cols=111 Identities=22% Similarity=0.445 Sum_probs=99.5
Q ss_pred hhhhhHHHHHHHHHHhcCCCccc----c----cCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeee---
Q psy11956 5 SAGNRRMNIDVIKLIESKHEGTT----L----KGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNK--- 73 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~~~~~~----~----~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~--- 73 (126)
+.+.+||++|+++|++++..++. + +|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 75 ~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~ 154 (323)
T 3ceg_A 75 AARARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGH 154 (323)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTT
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCC
Confidence 68999999999999998776532 1 789999999999999999999999999999999999999999998
Q ss_pred --ccccccccccceeee---C-------ceeeEEE-EeCCCCCCCCCeeeeeccCC--CCCCCC
Q psy11956 74 --MYHPNIDEVSAVFYY---G-------GVWKVRV-HLPEHYPFKSPSIGFMNKMY--HPNIDE 122 (126)
Q Consensus 74 --i~Hpnv~~~~g~ic~---~-------~~w~p~~-~~~~ilp~~~p~~~~~~~l~--~pn~~~ 122 (126)
+|||||+ .+|+||+ . +.|+|++ ++.+|| ++++++|. .||.++
T Consensus 155 ~~ifHPNV~-~~G~ICLsiL~~~~g~~~e~WsPa~stI~~VL------lsIqsLL~~~~Pn~~d 211 (323)
T 3ceg_A 155 SVRFNPNLY-NDGKVCLSILNTWHGRPEEKWNPQTSSFLQVL------VSVQSLILVAEPYFNE 211 (323)
T ss_dssp TCCCBTTBC-TTCBBCCGGGTSSCCCGGGSCCTTTCCHHHHH------HHHHHHTSCSSGGGGS
T ss_pred cccccCCCC-cCCeEechhhccccCCCcCCCCcCcCCHHHHH------HHHHHHHcCCCCCCCC
Confidence 9999999 5999999 3 6899999 899997 99999997 554443
No 50
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.97 E-value=4.8e-32 Score=193.43 Aligned_cols=110 Identities=24% Similarity=0.363 Sum_probs=99.2
Q ss_pred chhhhhHHHHHHHHHHhcCCCcccc--------cCcc---cEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEee
Q psy11956 4 ASAGNRRMNIDVIKLIESKHEGTTL--------KGLK---EFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMN 72 (126)
Q Consensus 4 ~~~~~~RL~~e~~~l~~~~~~~~~~--------~~~~---~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t 72 (126)
.++|.+||++||++|+ ...++.+ +|++ .|+++|. |++|||+||.|+++|.||++||++||+|+|.|
T Consensus 27 ~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 103 (190)
T 3o2u_A 27 LSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLK 103 (190)
T ss_dssp CCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECS
T ss_pred ccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEec
Confidence 3689999999999998 3444322 6889 9999997 78899999999999999999999999999999
Q ss_pred eccccccccccceeee---CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCC
Q psy11956 73 KMYHPNIDEVSAVFYY---GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEV 123 (126)
Q Consensus 73 ~i~Hpnv~~~~g~ic~---~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~ 123 (126)
++|||||+. +|.||+ .+.|+|+++++++| ++++++|..||.++.
T Consensus 104 ~i~HPnV~~-~G~iCl~iL~~~W~p~~~i~~vL------~~i~~ll~~pn~~~p 150 (190)
T 3o2u_A 104 KIFHPNIDL-KGNVCLNILREDWSPALDLQSII------TGLLFLFLEPNPNDP 150 (190)
T ss_dssp CCCCTTBCT-TSBBCCGGGTTTCCTTCCHHHHH------HHHHHHHHSCCTTSC
T ss_pred CcccCCCCC-CCeEechhccCCCCCCCCHHHHH------HHHHHHHhCCCCCcc
Confidence 999999995 999999 68999999999997 999999999998863
No 51
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.96 E-value=2.7e-32 Score=194.09 Aligned_cols=109 Identities=10% Similarity=0.193 Sum_probs=98.7
Q ss_pred hhhhhHHHHHHHHHHhcC---CCcccc----cCcccEEEEEECC-CCCCCCC-----------CEEEEEEEcCCCCCCCC
Q psy11956 5 SAGNRRMNIDVIKLIESK---HEGTTL----KGLKEFCVKFFGP-RDTPYEG-----------GVWKVRVHLPEHYPFKS 65 (126)
Q Consensus 5 ~~~~~RL~~e~~~l~~~~---~~~~~~----~~~~~w~~~i~gp-~~t~y~g-----------g~f~~~i~~p~~yP~~p 65 (126)
+.+.+||++||++|++++ ..++.+ +|++.|+++|.|| ++|||+| |.|+++|.||++||++|
T Consensus 26 ~~a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~P 105 (186)
T 1zuo_A 26 VQASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDP 105 (186)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCC
Confidence 689999999999999877 455554 7899999999997 9999998 89999999999999999
Q ss_pred CceeEeeecccc-ccccccceeee----CceeeEEEEeCCCCCCCCCeeeeeccCCCCCC
Q psy11956 66 PSIGFMNKMYHP-NIDEVSAVFYY----GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNI 120 (126)
Q Consensus 66 P~v~f~t~i~Hp-nv~~~~g~ic~----~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~ 120 (126)
|+|+|.+++||| ||+ .+|.||+ .+.|+|+++++++| ++++++|..|+.
T Consensus 106 P~V~f~tpi~hPnnV~-~~G~ICL~iL~~~~WsP~~ti~~VL------~sI~slL~~p~a 158 (186)
T 1zuo_A 106 PFVRVVLPVLSGGYVL-GGGALCMELLTKQGWSSAYSIESVI------MQINATLVKGKA 158 (186)
T ss_dssp CEEEEEESCEESTTBC-GGGBBCCGGGSTTTCCTTSCHHHHH------HHHHHHHHHTTC
T ss_pred CeEEEeCCccCCCccC-CCCcEEeccCCCCCCCCcCcHHHHH------HHHHHHHcCCCh
Confidence 999999999999 699 5999999 37999999999997 999998887764
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.90 E-value=9.4e-26 Score=156.10 Aligned_cols=93 Identities=12% Similarity=0.094 Sum_probs=80.5
Q ss_pred hhhHHHHHHHHHHhcCCCcccccCcccEEEEEECCCCCCCCCC----------EEEEEEEcCCCCCCCCCceeEeee-cc
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGG----------VWKVRVHLPEHYPFKSPSIGFMNK-MY 75 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~~p~~yP~~pP~v~f~t~-i~ 75 (126)
.++||++|+++|++.. ....+|++.|.+.+.||++|+|+|| .|+++|.||++||.+||+|+|.+. ++
T Consensus 33 w~~RL~eE~k~L~k~v--~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~ 110 (172)
T 2z6o_A 33 WVQRLKEEYQSLIRYV--ENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGK 110 (172)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTT
T ss_pred HHHHHHHHHHHHHHHh--ccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCC
Confidence 3999999999999831 1112799999999999999999999 999999999999999999999998 99
Q ss_pred ccccccccceeee----Cc---eeeEEEEeCCCC
Q psy11956 76 HPNIDEVSAVFYY----GG---VWKVRVHLPEHY 102 (126)
Q Consensus 76 Hpnv~~~~g~ic~----~~---~w~p~~~~~~il 102 (126)
||||+ .+|+||+ .. .|+|++++..+|
T Consensus 111 hpnmY-~~G~ICLdIL~kp~Ws~~~P~~~IahiL 143 (172)
T 2z6o_A 111 TAKMY-RGGKICLTDHFKPLWARNVPKFGLAHLM 143 (172)
T ss_dssp CSSBC-TTSBBCCCTTHHHHHHHHTTSCCHHHHH
T ss_pred CCCCC-CCCcEechhhccccccccCCccCHHHHH
Confidence 99999 5999999 22 444999888764
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.68 E-value=1.2e-17 Score=113.41 Aligned_cols=90 Identities=12% Similarity=0.096 Sum_probs=76.3
Q ss_pred hhhhHHHHHHHHHHhcCCCcccccCcccEEEEEECCCCCCCCCC----------EEEEEEEcCCCCCCCCCceeEeee-c
Q psy11956 6 AGNRRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGG----------VWKVRVHLPEHYPFKSPSIGFMNK-M 74 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg----------~f~~~i~~p~~yP~~pP~v~f~t~-i 74 (126)
...+||.+||+.|.+--. ...++-.+|...+.|++||+|+|+ .|+++++||.+||..||+++|.+. .
T Consensus 34 ~w~~RlkeEy~alI~yv~--~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldg 111 (168)
T 3kpa_A 34 KWTARLKEEYASLITYVE--HNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEG 111 (168)
T ss_dssp HHHHHHHHHHHHHHHHHH--HHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTT
T ss_pred HHHHHHHHHHHHHHHHHH--hcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccC
Confidence 467999999999865111 112566789999999999999999 899999999999999999999995 8
Q ss_pred cccccccccceeeeCceeeEEEEe
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHL 98 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~ 98 (126)
+|+|++ .+|+||+...|+|.++-
T Consensus 112 kt~kmY-r~GkICLdIhwkPlW~~ 134 (168)
T 3kpa_A 112 KTVKMY-RGGKICMTTHFFPLWAR 134 (168)
T ss_dssp TCSSEE-TTTEECCCTTHHHHHHH
T ss_pred cCcccc-CCCcEEeccccchhhHh
Confidence 999999 59999998888887643
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.56 E-value=4.4e-16 Score=108.08 Aligned_cols=108 Identities=19% Similarity=0.287 Sum_probs=85.7
Q ss_pred hhHHHHHHHHHHhc-CCCccc------ccCcccEEEEEECCCCCCCCCCE---EEEEEEcCCCCCCCCCceeEee-----
Q psy11956 8 NRRMNIDVIKLIES-KHEGTT------LKGLKEFCVKFFGPRDTPYEGGV---WKVRVHLPEHYPFKSPSIGFMN----- 72 (126)
Q Consensus 8 ~~RL~~e~~~l~~~-~~~~~~------~~~~~~w~~~i~gp~~t~y~gg~---f~~~i~~p~~yP~~pP~v~f~t----- 72 (126)
.+|..+|+.++.+. +..... .++..++.+.+.|.-..+|+|+. |.+.|-||++||++||.|.|.+
T Consensus 30 ~~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m 109 (162)
T 3r3q_A 30 GRTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDM 109 (162)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCT
T ss_pred hhHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccc
Confidence 35667787777543 221111 15666788888888889999998 8899999999999999998865
Q ss_pred --e---cc-ccccccccceeee--CceeeE-EEEeCCCCCCCCCeeeeeccCCCCCCCC
Q psy11956 73 --K---MY-HPNIDEVSAVFYY--GGVWKV-RVHLPEHYPFKSPSIGFMNKMYHPNIDE 122 (126)
Q Consensus 73 --~---i~-Hpnv~~~~g~ic~--~~~w~p-~~~~~~ilp~~~p~~~~~~~l~~pn~~~ 122 (126)
+ |+ |||||. +|++|+ -..|++ +.++.+++ ..+++++-+||.|.
T Consensus 110 ~~~~~~I~~hpnVD~-~G~I~lpyL~~W~p~~s~L~~ll------~~l~~lf~ep~~d~ 161 (162)
T 3r3q_A 110 NTISSSLPIQEYIDS-NGWIALPILHAWDPAAMNLIMVV------QELMSLLHEPPQDQ 161 (162)
T ss_dssp TTSCTTSTHHHHBCT-TSBBCCGGGGSCCGGGCCHHHHH------HHHHHTTSCCCCCC
T ss_pred cccccccCCCCCCCC-CCcEeCcccccCCCCcCcHHHHH------HHHHHHhcCCCCCC
Confidence 1 77 999995 999999 467999 68999996 88999999999885
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=98.80 E-value=2.3e-09 Score=73.04 Aligned_cols=67 Identities=21% Similarity=0.447 Sum_probs=53.3
Q ss_pred cCcccEEEEEECCCCCCCCCCEEEE--EEEcCCCCCCCCCceeEeee------ccccccccccceeee--CceeeE-EEE
Q psy11956 29 KGLKEFCVKFFGPRDTPYEGGVWKV--RVHLPEHYPFKSPSIGFMNK------MYHPNIDEVSAVFYY--GGVWKV-RVH 97 (126)
Q Consensus 29 ~~~~~w~~~i~gp~~t~y~gg~f~~--~i~~p~~yP~~pP~v~f~t~------i~Hpnv~~~~g~ic~--~~~w~p-~~~ 97 (126)
.++..|..+|. .+|+|+.|.+ .|-||++||++||.| |.++ ..|+|||. +|++|+ -..|++ ..+
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~i~lpyL~~W~~~~sn 124 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGKIYLPYLHEWKHPQSD 124 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCBBCCHHHHTCCTTTCC
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCCEecccccccCCCCCC
Confidence 56778888887 6799999985 888999999999999 5554 48999995 999999 355987 444
Q ss_pred eCCC
Q psy11956 98 LPEH 101 (126)
Q Consensus 98 ~~~i 101 (126)
+.++
T Consensus 125 L~~l 128 (146)
T 3obq_A 125 LLGL 128 (146)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4433
No 56
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=98.60 E-value=3.2e-08 Score=66.67 Aligned_cols=52 Identities=17% Similarity=0.372 Sum_probs=43.2
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+..+|+
T Consensus 42 w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~ 93 (138)
T 1jat_B 42 WNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGE 93 (138)
T ss_dssp EEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCB
T ss_pred EEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCE
Confidence 3344444556666688899999999999999999999999999999997784
No 57
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=98.56 E-value=5.4e-08 Score=66.29 Aligned_cols=52 Identities=37% Similarity=0.704 Sum_probs=44.7
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+..+|.
T Consensus 34 w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~ 85 (149)
T 1fxt_A 34 LKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGA 85 (149)
T ss_dssp EEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSCC
T ss_pred EEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCCe
Confidence 4445555667777788999999999999999999999999999999987774
No 58
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=98.52 E-value=6.5e-08 Score=66.21 Aligned_cols=52 Identities=54% Similarity=1.048 Sum_probs=44.5
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+..+|.
T Consensus 31 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G~ 82 (152)
T 2onu_A 31 FDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASGS 82 (152)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTCB
T ss_pred EEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCCe
Confidence 4445555667777788999999999999999999999999999999977774
No 59
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=98.51 E-value=6.2e-08 Score=69.87 Aligned_cols=52 Identities=37% Similarity=0.704 Sum_probs=46.4
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+..+|.
T Consensus 35 w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ 86 (215)
T 1tte_A 35 LKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTGA 86 (215)
T ss_dssp EEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSSC
T ss_pred cEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCCE
Confidence 5556666778888899999999999999999999999999999999987774
No 60
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=98.50 E-value=7.3e-08 Score=66.33 Aligned_cols=52 Identities=35% Similarity=0.805 Sum_probs=43.1
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+..+|+
T Consensus 43 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G~ 94 (159)
T 2bep_A 43 LRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGA 94 (159)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCB
T ss_pred EEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCCE
Confidence 3344444556666688899999999999999999999999999999987774
No 61
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=98.49 E-value=7.8e-08 Score=68.57 Aligned_cols=52 Identities=35% Similarity=0.805 Sum_probs=44.7
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|.+.+|||||+..+|+
T Consensus 40 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G~ 91 (201)
T 3k9o_A 40 LRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGA 91 (201)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred EEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCCe
Confidence 4445555667777789999999999999999999999999999999987884
No 62
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=98.49 E-value=7.8e-08 Score=69.40 Aligned_cols=51 Identities=31% Similarity=0.704 Sum_probs=42.7
Q ss_pred ccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 76 HPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 76 Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
+.-|.++.|+.+.++.|...+.+...||++||.+.|++.+|||||+..+|.
T Consensus 56 ~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G~ 106 (216)
T 2pwq_A 56 VGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTGA 106 (216)
T ss_dssp EEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCB
T ss_pred EEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCCE
Confidence 334444556666688899999999999999999999999999999987884
No 63
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=98.49 E-value=7.9e-08 Score=66.88 Aligned_cols=51 Identities=29% Similarity=0.645 Sum_probs=43.6
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 36 W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~-~G~ 86 (169)
T 1ayz_A 36 WNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYA-NGE 86 (169)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TSB
T ss_pred ceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCC-CCe
Confidence 444455566777778899999999999999999999999999999998 774
No 64
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=98.48 E-value=9.4e-08 Score=66.65 Aligned_cols=52 Identities=46% Similarity=0.910 Sum_probs=43.4
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+..+|.
T Consensus 40 w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G~ 91 (171)
T 1yf9_A 40 FWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSGS 91 (171)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred EEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCCe
Confidence 3444445566666688899999999999999999999999999999976774
No 65
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=98.45 E-value=1.3e-07 Score=64.86 Aligned_cols=51 Identities=33% Similarity=0.800 Sum_probs=43.4
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+..|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+ .+|.
T Consensus 37 w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~-~~G~ 87 (155)
T 1jat_A 37 FQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNID-RLGR 87 (155)
T ss_dssp EEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBC-TTCC
T ss_pred EEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCC-CCCE
Confidence 44555556677777889999999999999999999999999999999 4774
No 66
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=98.45 E-value=1.2e-07 Score=64.73 Aligned_cols=51 Identities=31% Similarity=0.677 Sum_probs=43.8
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+. +|+
T Consensus 36 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 86 (152)
T 2aak_A 36 WNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYA-DGS 86 (152)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TSB
T ss_pred EEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCC-CCE
Confidence 444555566777778899999999999999999999999999999998 774
No 67
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=98.44 E-value=1.4e-07 Score=65.10 Aligned_cols=50 Identities=16% Similarity=0.345 Sum_probs=41.2
Q ss_pred cccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 77 PNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 77 pnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+..+|+
T Consensus 63 ~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ 112 (160)
T 2a4d_A 63 GMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGV 112 (160)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCB
T ss_pred EEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCCE
Confidence 33344455555678899999999999999999999999999999976774
No 68
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=98.44 E-value=1.3e-07 Score=67.13 Aligned_cols=52 Identities=29% Similarity=0.686 Sum_probs=44.7
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.|.|++.++||||+..+|.
T Consensus 77 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ 128 (193)
T 2f4z_A 77 WRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTGA 128 (193)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred EEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCCE
Confidence 4555555667777788999999999999999999999999999999977774
No 69
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=98.43 E-value=1.5e-07 Score=65.13 Aligned_cols=51 Identities=29% Similarity=0.640 Sum_probs=43.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 37 w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~-~G~ 87 (165)
T 2ucz_A 37 WDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP-NGE 87 (165)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT-TSB
T ss_pred EEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC-CCc
Confidence 444455556777778899999999999999999999999999999997 563
No 70
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=98.42 E-value=1.5e-07 Score=66.03 Aligned_cols=52 Identities=62% Similarity=1.108 Sum_probs=43.1
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+..+|.
T Consensus 53 W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G~ 104 (179)
T 2z5d_A 53 FVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASGT 104 (179)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTCB
T ss_pred eEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCCe
Confidence 3344444566666688899999999999999999999999999999987774
No 71
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=98.42 E-value=1.4e-07 Score=65.75 Aligned_cols=52 Identities=15% Similarity=0.356 Sum_probs=44.3
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+..+|+
T Consensus 71 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G~ 122 (170)
T 2hlw_A 71 WTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGV 122 (170)
T ss_dssp EEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSCB
T ss_pred eEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCCE
Confidence 4455555667777788999999999999999999999999999999966774
No 72
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=98.42 E-value=1.5e-07 Score=64.97 Aligned_cols=51 Identities=27% Similarity=0.549 Sum_probs=44.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||..|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 36 w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~-~G~ 86 (164)
T 3h8k_A 36 WEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP-DGR 86 (164)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT-TSB
T ss_pred EEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC-CCc
Confidence 455555667777778999999999999999999999999999999986 763
No 73
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=98.42 E-value=1.8e-07 Score=65.63 Aligned_cols=51 Identities=27% Similarity=0.703 Sum_probs=43.8
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 62 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~-~G~ 112 (179)
T 1i7k_A 62 WVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT-QGN 112 (179)
T ss_dssp EEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT-TCB
T ss_pred cEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc-CCe
Confidence 444555567777778899999999999999999999999999999998 673
No 74
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=98.42 E-value=1.6e-07 Score=65.40 Aligned_cols=52 Identities=23% Similarity=0.644 Sum_probs=42.5
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+..+|+
T Consensus 55 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G~ 106 (169)
T 1yrv_A 55 WEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQ 106 (169)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTCC
T ss_pred ceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCCe
Confidence 3334444556666688899999999999999999999999999999666874
No 75
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=98.42 E-value=1.6e-07 Score=64.12 Aligned_cols=51 Identities=41% Similarity=0.867 Sum_probs=44.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||..|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 36 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~ 86 (151)
T 4gpr_A 36 WTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK-NGV 86 (151)
T ss_dssp EEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCB
T ss_pred EEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC-CCE
Confidence 445555567777778999999999999999999999999999999997 773
No 76
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=98.41 E-value=1.7e-07 Score=63.90 Aligned_cols=51 Identities=37% Similarity=0.865 Sum_probs=43.6
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|.+.++||||+. +|+
T Consensus 36 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 86 (150)
T 1z2u_A 36 WQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGS 86 (150)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCB
T ss_pred EEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC-CCe
Confidence 445555566777778899999999999999999999999999999997 674
No 77
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=98.40 E-value=1.7e-07 Score=64.23 Aligned_cols=49 Identities=31% Similarity=0.715 Sum_probs=41.1
Q ss_pred cccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 77 PNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 77 pnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 43 ~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 91 (156)
T 2e2c_A 43 ATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ-SGN 91 (156)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCB
T ss_pred EEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc-Cce
Confidence 3344445666668889999999999999999999999999999998 674
No 78
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=98.40 E-value=1.8e-07 Score=63.65 Aligned_cols=51 Identities=39% Similarity=0.861 Sum_probs=44.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+. +|+
T Consensus 33 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 83 (149)
T 2r0j_A 33 FNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDK-LGR 83 (149)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TCB
T ss_pred EEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCC-CCE
Confidence 455555667777778999999999999999999999999999999997 463
No 79
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=98.40 E-value=1.9e-07 Score=63.89 Aligned_cols=51 Identities=39% Similarity=0.845 Sum_probs=43.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 37 w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 87 (154)
T 2c2v_B 37 FHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDK-LGR 87 (154)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT-TCB
T ss_pred EEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCcc-CCe
Confidence 444555556777778899999999999999999999999999999996 573
No 80
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=98.39 E-value=1.9e-07 Score=65.65 Aligned_cols=51 Identities=37% Similarity=0.834 Sum_probs=43.2
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 40 W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~-~G~ 90 (183)
T 3rz3_A 40 WEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE-TGD 90 (183)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT-TSB
T ss_pred eeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC-CCc
Confidence 444455556777778899999999999999999999999999999997 773
No 81
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=98.39 E-value=2.1e-07 Score=63.95 Aligned_cols=49 Identities=16% Similarity=0.369 Sum_probs=40.3
Q ss_pred cccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 77 PNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 77 pnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 59 ~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~G~ 107 (156)
T 2q0v_A 59 CTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDN-CGR 107 (156)
T ss_dssp EEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCT-TSB
T ss_pred EEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCcc-CCe
Confidence 3334445556667889999999999999999999999999999997 463
No 82
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=98.39 E-value=2.1e-07 Score=64.01 Aligned_cols=51 Identities=27% Similarity=0.626 Sum_probs=42.1
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+.. |+
T Consensus 45 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~-G~ 95 (158)
T 1zdn_A 45 LQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN-GE 95 (158)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT-SB
T ss_pred eeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC-CE
Confidence 3444444566666688899999999999999999999999999999974 63
No 83
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=98.38 E-value=2.3e-07 Score=61.44 Aligned_cols=51 Identities=24% Similarity=0.565 Sum_probs=43.1
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccC-CCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKM-YHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l-~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.+ +||||+. +|+
T Consensus 38 w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~-~G~ 89 (125)
T 2fo3_A 38 WIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS-NGD 89 (125)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT-TSB
T ss_pred hheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC-CCE
Confidence 44455556677777889999999999999999999999996 9999997 673
No 84
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=98.38 E-value=2.2e-07 Score=64.57 Aligned_cols=51 Identities=41% Similarity=0.800 Sum_probs=43.1
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 36 w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~-~G~ 86 (169)
T 1yh2_A 36 LRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDS-AGR 86 (169)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCB
T ss_pred EEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCc-CCe
Confidence 444555566777778899999999999999999999999999999995 673
No 85
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=98.37 E-value=2.4e-07 Score=64.12 Aligned_cols=51 Identities=29% Similarity=0.664 Sum_probs=43.9
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 47 W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~-~G~ 97 (163)
T 3rcz_B 47 WKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYP-SGT 97 (163)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT-TSB
T ss_pred EEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCC-CCc
Confidence 455555667777778999999999999999999999999999999995 773
No 86
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=98.37 E-value=2.3e-07 Score=64.33 Aligned_cols=51 Identities=39% Similarity=0.862 Sum_probs=42.4
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+. +|.
T Consensus 53 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~-~G~ 103 (166)
T 2ayv_A 53 WQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS-QGA 103 (166)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-TCB
T ss_pred eeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC-CCe
Confidence 344444456666678889999999999999999999999999999997 673
No 87
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=98.37 E-value=2.4e-07 Score=64.19 Aligned_cols=51 Identities=37% Similarity=0.866 Sum_probs=42.6
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 51 W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~-~G~ 101 (165)
T 2c4o_A 51 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGS 101 (165)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT-TCB
T ss_pred eEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC-CCe
Confidence 344445556666678889999999999999999999999999999997 673
No 88
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=98.37 E-value=2.3e-07 Score=63.70 Aligned_cols=51 Identities=33% Similarity=0.690 Sum_probs=43.5
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 41 w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 91 (157)
T 2gjd_A 41 WEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYP-SGT 91 (157)
T ss_dssp EEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCT-TSB
T ss_pred EEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCC-CCc
Confidence 455555566777778899999999999999999999999999999995 673
No 89
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=98.36 E-value=3.1e-07 Score=61.79 Aligned_cols=51 Identities=22% Similarity=0.578 Sum_probs=42.6
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCC--CCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMY--HPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~--~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++ ||||+. +|+
T Consensus 56 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~-~G~ 108 (136)
T 2a7l_A 56 WIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYS-NGH 108 (136)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCT-TCB
T ss_pred eEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCC-CCe
Confidence 344444556667778899999999999999999999999999 999997 774
No 90
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=98.36 E-value=3.2e-07 Score=61.63 Aligned_cols=51 Identities=24% Similarity=0.578 Sum_probs=42.8
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccC-CCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKM-YHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l-~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++.+ +||||+. +|+
T Consensus 52 W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~-~G~ 103 (136)
T 2h2y_A 52 WIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS-NGD 103 (136)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT-TCC
T ss_pred cEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC-CCE
Confidence 44445555677777889999999999999999999999996 9999997 774
No 91
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=98.36 E-value=2.5e-07 Score=68.20 Aligned_cols=52 Identities=35% Similarity=0.805 Sum_probs=43.5
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.+.|.+.+|||||+..+|.
T Consensus 92 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G~ 143 (253)
T 3e46_A 92 LRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTGA 143 (253)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTCB
T ss_pred EEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCCe
Confidence 3344444566666688899999999999999999999999999999987874
No 92
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=98.34 E-value=3.2e-07 Score=63.94 Aligned_cols=51 Identities=31% Similarity=0.819 Sum_probs=41.9
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 50 W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~-~G~ 100 (172)
T 2awf_A 50 WEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDK-NGD 100 (172)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT-TCB
T ss_pred cEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCC-CCc
Confidence 333444455666668889999999999999999999999999999997 563
No 93
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=98.33 E-value=3.3e-07 Score=63.17 Aligned_cols=51 Identities=27% Similarity=0.579 Sum_probs=42.6
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+.+.||++||.+.|++.++||||+. +|+
T Consensus 44 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 94 (161)
T 2grr_A 44 WECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYP-SGT 94 (161)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCT-TSB
T ss_pred EEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCC-CCe
Confidence 444455556666678889999999999999999999999999999995 674
No 94
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=98.33 E-value=2.4e-07 Score=64.56 Aligned_cols=52 Identities=27% Similarity=0.594 Sum_probs=44.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeec-cCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMN-KMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~-~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|++ .++||||+..+|+
T Consensus 50 w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G~ 102 (172)
T 2y9m_A 50 WEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGE 102 (172)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTTE
T ss_pred EEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCCE
Confidence 444555566777778899999999999999999999999 9999999765773
No 95
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=98.32 E-value=3.2e-07 Score=62.84 Aligned_cols=44 Identities=41% Similarity=0.832 Sum_probs=38.6
Q ss_pred ccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 82 VSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 82 ~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
+.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 43 P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~-~G~ 86 (155)
T 1wzv_A 43 PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDE-NGQ 86 (155)
T ss_dssp CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT-TCB
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCC-CCe
Confidence 35556667889999999999999999999999999999997 774
No 96
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=98.32 E-value=5.1e-07 Score=62.57 Aligned_cols=51 Identities=20% Similarity=0.561 Sum_probs=45.3
Q ss_pred cccccccccceeee--CceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYY--GGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~--~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||..|.++.|+.+. ++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 52 w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~ 104 (167)
T 4ds2_A 52 WILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTG-EGG 104 (167)
T ss_dssp EEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCT-TSC
T ss_pred EEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCC-CCE
Confidence 56666677888888 8999999999999999999999999999999995 774
No 97
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=98.30 E-value=4.2e-07 Score=64.56 Aligned_cols=51 Identities=31% Similarity=0.679 Sum_probs=42.5
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.|.|++.++||||+. +|.
T Consensus 80 W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~-~G~ 130 (194)
T 3bzh_A 80 WRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINS-QGV 130 (194)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCT-TCB
T ss_pred ceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECC-CCc
Confidence 344444556666678889999999999999999999999999999997 573
No 98
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=98.26 E-value=7.6e-07 Score=60.87 Aligned_cols=44 Identities=43% Similarity=0.922 Sum_probs=39.1
Q ss_pred ccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 82 VSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 82 ~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
+.|+.+.++.|...+.+.+.||++||.+.|++.++||||+. +|.
T Consensus 41 P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 84 (154)
T 1c4z_D 41 PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDE-KGQ 84 (154)
T ss_dssp CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCT-TCB
T ss_pred CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCC-CCE
Confidence 35666678889999999999999999999999999999997 674
No 99
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=98.22 E-value=8.2e-07 Score=61.15 Aligned_cols=44 Identities=30% Similarity=0.599 Sum_probs=39.1
Q ss_pred ccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 82 VSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 82 ~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
+.|+.+.++.|...+.+.+.||++||.+.|.+.++||||+. +|.
T Consensus 43 p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~-~G~ 86 (160)
T 1y8x_A 43 PDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-EGN 86 (160)
T ss_dssp CSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TCB
T ss_pred CCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC-CCe
Confidence 45666668889999999999999999999999999999997 573
No 100
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=98.21 E-value=8.5e-07 Score=62.23 Aligned_cols=45 Identities=29% Similarity=0.564 Sum_probs=39.8
Q ss_pred cccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 81 EVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 81 ~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
++.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 62 gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~-~G~ 106 (180)
T 2nvu_C 62 CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL-EGN 106 (180)
T ss_dssp CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT-TSB
T ss_pred CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC-CCc
Confidence 356677778899999999999999999999999999999997 563
No 101
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=98.15 E-value=1.3e-06 Score=60.44 Aligned_cols=43 Identities=33% Similarity=0.799 Sum_probs=37.3
Q ss_pred cceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 83 SAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 83 ~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
.|+.+.++.|...+.+...||++||.+.|++.++||||+. +|+
T Consensus 54 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~ 96 (167)
T 3fn1_B 54 DEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE-TGE 96 (167)
T ss_dssp SSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT-TCC
T ss_pred CCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC-CCE
Confidence 3445557889999999999999999999999999999995 774
No 102
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=98.09 E-value=2.2e-06 Score=66.86 Aligned_cols=51 Identities=37% Similarity=0.866 Sum_probs=45.0
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
||.-|.++.|+.+.++.|...+.+...||++||.+.|.+.++||||+. +|.
T Consensus 35 w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~-~G~ 85 (399)
T 4ddg_A 35 WQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS-NGS 85 (399)
T ss_dssp EEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT-TCB
T ss_pred EEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC-CCe
Confidence 555666667888889999999999999999999999999999999997 773
No 103
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=98.06 E-value=2.7e-06 Score=60.17 Aligned_cols=43 Identities=30% Similarity=0.656 Sum_probs=38.1
Q ss_pred cceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCCC
Q psy11956 83 SAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSGE 126 (126)
Q Consensus 83 ~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g~ 126 (126)
.++.+.++.|...+.+...||++||.+.|++.++||||+. +|.
T Consensus 73 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~-~G~ 115 (190)
T 3o2u_A 73 DEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDL-KGN 115 (190)
T ss_dssp SSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCT-TSB
T ss_pred CCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCC-CCe
Confidence 4456668889999999999999999999999999999997 773
No 104
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=97.97 E-value=5.5e-06 Score=62.93 Aligned_cols=51 Identities=22% Similarity=0.471 Sum_probs=45.4
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeecc-----CCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNK-----MYHPNIDEVSGE 126 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~-----l~~pn~~~~~g~ 126 (126)
|+.-|.++.|+.+.++.|...+.+...||++||.|.|++. +|||||+. +|.
T Consensus 112 w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~-~G~ 167 (323)
T 3ceg_A 112 MKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYN-DGK 167 (323)
T ss_dssp EEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCT-TCB
T ss_pred cEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCc-CCe
Confidence 5666677788888899999999999999999999999998 99999995 773
No 105
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=97.75 E-value=2.6e-05 Score=53.96 Aligned_cols=50 Identities=14% Similarity=0.305 Sum_probs=41.9
Q ss_pred ccccccccceeeeCc----------eeeEEEEeCCCCCCCCCeeeeecc-CCCCCCCCCCCC
Q psy11956 76 HPNIDEVSAVFYYGG----------VWKVRVHLPEHYPFKSPSIGFMNK-MYHPNIDEVSGE 126 (126)
Q Consensus 76 Hpnv~~~~g~ic~~~----------~w~p~~~~~~ilp~~~p~~~~~~~-l~~pn~~~~~g~ 126 (126)
+.-+.+++|+.+.++ .|...+.+.+.||.+||.+.|.++ ++|||+|. +|+
T Consensus 59 ~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~-~G~ 119 (172)
T 2z6o_A 59 FRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYR-GGK 119 (172)
T ss_dssp EEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCT-TSB
T ss_pred EEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCC-CCc
Confidence 333445677777766 899999999999999999999998 99999997 674
No 106
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=97.31 E-value=5.7e-05 Score=53.11 Aligned_cols=35 Identities=11% Similarity=0.295 Sum_probs=32.1
Q ss_pred ceeeEEEEeCCCCCCCCCeeeeeccCCCC-CCCCCCC
Q psy11956 90 GVWKVRVHLPEHYPFKSPSIGFMNKMYHP-NIDEVSG 125 (126)
Q Consensus 90 ~~w~p~~~~~~ilp~~~p~~~~~~~l~~p-n~~~~~g 125 (126)
+.|...+.+.+.||++||.+.|.+.++|| ||+. +|
T Consensus 89 g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~-~G 124 (186)
T 1zuo_A 89 EYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLG-GG 124 (186)
T ss_dssp CSEEEEEECCTTTTSSCCEEEEEESCEESTTBCG-GG
T ss_pred eEEEEEEECCCCCCCCCCeEEEeCCccCCCccCC-CC
Confidence 67999999999999999999999999999 6985 66
No 107
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=97.29 E-value=0.0002 Score=50.39 Aligned_cols=48 Identities=23% Similarity=0.468 Sum_probs=38.8
Q ss_pred cccccccccceeeeCceeeEEEEeCCCCCCCCCeeeeeccCCCCCCCCCCC
Q psy11956 75 YHPNIDEVSAVFYYGGVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSG 125 (126)
Q Consensus 75 ~Hpnv~~~~g~ic~~~~w~p~~~~~~ilp~~~p~~~~~~~l~~pn~~~~~g 125 (126)
||.-|.++.|+.+.++.|...+.+...||++||.|.|++. ||+++. +|
T Consensus 46 W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~-~G 93 (187)
T 2f4w_A 46 WHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC-NT 93 (187)
T ss_dssp EEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT-TS
T ss_pred eEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc-CC
Confidence 4444445566666788899999999999999999999998 888876 45
No 108
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.74 E-value=0.0076 Score=39.20 Aligned_cols=67 Identities=12% Similarity=0.118 Sum_probs=44.5
Q ss_pred hhhHHHHHHHHHHhcCCCcccc-c-CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeee
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTL-K-GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~-~-~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
...+...|+..|+.--...+.. + ....+.+.+..-.+..-+.-.+.+.|.+|++||.+||.+.+.+.
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~~ 79 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVLSENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFSQ 79 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEECCSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEccCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEcC
Confidence 4566678888887655444433 2 24566666653222222334688999999999999999988763
No 109
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=96.20 E-value=0.0033 Score=42.75 Aligned_cols=44 Identities=18% Similarity=0.391 Sum_probs=37.8
Q ss_pred ccceeeeCc----------eeeEEEEeCCCCCCCCCeeeeecc-CCCCCCCCCCCC
Q psy11956 82 VSAVFYYGG----------VWKVRVHLPEHYPFKSPSIGFMNK-MYHPNIDEVSGE 126 (126)
Q Consensus 82 ~~g~ic~~~----------~w~p~~~~~~ilp~~~p~~~~~~~-l~~pn~~~~~g~ 126 (126)
++|+.+.|+ .|...+++..-||.+||.+.|.++ .+|+++|. +|+
T Consensus 67 ~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr-~Gk 121 (168)
T 3kpa_A 67 PQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYR-GGK 121 (168)
T ss_dssp TTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEET-TTE
T ss_pred CCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccC-CCc
Confidence 567777666 788999999999999999999996 89999987 663
No 110
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.088 Score=34.47 Aligned_cols=65 Identities=12% Similarity=0.096 Sum_probs=42.1
Q ss_pred hhHHHHHHHHHHhcCCCcccc-c---------CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeee
Q psy11956 8 NRRMNIDVIKLIESKHEGTTL-K---------GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 8 ~~RL~~e~~~l~~~~~~~~~~-~---------~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
..+...|+..|+.--...+.. + ....+.+.+....+ .-..-.+.+.+.+|.+||..+|.+.+.+.
T Consensus 12 ~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 12 YEIQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 344566777776544333322 2 24568888874322 11234788999999999999999998653
No 111
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=95.84 E-value=0.061 Score=34.77 Aligned_cols=67 Identities=15% Similarity=0.207 Sum_probs=42.2
Q ss_pred hhhHHHHHHHHHHhcCCCcccc-c-----CcccEEEEEECCCCCCC--CCCEEEEEEEcCCCCCCCCCceeEeee
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTL-K-----GLKEFCVKFFGPRDTPY--EGGVWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~-~-----~~~~w~~~i~gp~~t~y--~gg~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
...+...|+..|+.--...+.. + ....+.+.+....+..- ..-.+.+.|.+|++||..+|.+...+.
T Consensus 9 ~~e~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 9 EDWVLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CCCHHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 3456778999887755444333 2 12334444542222111 124788999999999999999998874
No 112
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.10 E-value=0.077 Score=34.35 Aligned_cols=65 Identities=14% Similarity=0.061 Sum_probs=41.4
Q ss_pred hhhHHHHHHHHHHhcCCC--cccc-c----CcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEee
Q psy11956 7 GNRRMNIDVIKLIESKHE--GTTL-K----GLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMN 72 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~--~~~~-~----~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t 72 (126)
...+...|+..|+.--.. .+.. + +...+.+.+... +..-..-.+.+.+.+|.+||..+|.+.+.+
T Consensus 8 ~~e~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~~-~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 8 MAEPVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKAE-GFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp SCHHHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEECC-TTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecCC-CCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 344566788888754332 2322 1 134677777632 211112478899999999999999998764
No 113
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=94.98 E-value=0.032 Score=38.25 Aligned_cols=34 Identities=29% Similarity=0.423 Sum_probs=28.1
Q ss_pred eeEEEEeCCCCCCCCCeeeeec----------cCC-CCCCCCCCCC
Q psy11956 92 WKVRVHLPEHYPFKSPSIGFMN----------KMY-HPNIDEVSGE 126 (126)
Q Consensus 92 w~p~~~~~~ilp~~~p~~~~~~----------~l~-~pn~~~~~g~ 126 (126)
+.-.+.+.+.||++||++.+.. .++ |||||+ +|+
T Consensus 83 ~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~-~G~ 127 (162)
T 3r3q_A 83 IPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDS-NGW 127 (162)
T ss_dssp EEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCT-TSB
T ss_pred ccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCC-CCc
Confidence 6678889999999999998865 167 999998 673
No 114
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=94.59 E-value=0.25 Score=32.08 Aligned_cols=65 Identities=18% Similarity=0.194 Sum_probs=41.5
Q ss_pred hhhHHHHHHHHHHhcCCCcccc-cC--------cccEEEEEECCCC-C-CCCCCEEEEEEEcCCCCCCCCCceeEee
Q psy11956 7 GNRRMNIDVIKLIESKHEGTTL-KG--------LKEFCVKFFGPRD-T-PYEGGVWKVRVHLPEHYPFKSPSIGFMN 72 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~~~~-~~--------~~~w~~~i~gp~~-t-~y~gg~f~~~i~~p~~yP~~pP~v~f~t 72 (126)
...+...|+..|+.--...+.. ++ ...+.+.+. +.+ . .-..-.+.+.|.||++||..+|.+.+.+
T Consensus 11 ~~e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 11 YSQRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred hHHHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3455667888887654444333 21 345667776 222 1 0012468899999999999999998854
No 115
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=92.38 E-value=0.49 Score=31.46 Aligned_cols=24 Identities=25% Similarity=0.420 Sum_probs=21.3
Q ss_pred EEEEEEEcCCCCCCCCCceeEeee
Q psy11956 50 VWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 50 ~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
.+.+.|.+|.+||..+|.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 578899999999999999988764
No 116
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=91.55 E-value=0.39 Score=32.23 Aligned_cols=36 Identities=22% Similarity=0.607 Sum_probs=27.0
Q ss_pred Cceee--EEEEeCCCCCCCCCeeeeecc------CCCCCCCCCCCC
Q psy11956 89 GGVWK--VRVHLPEHYPFKSPSIGFMNK------MYHPNIDEVSGE 126 (126)
Q Consensus 89 ~~~w~--p~~~~~~ilp~~~p~~~~~~~------l~~pn~~~~~g~ 126 (126)
+..++ -.+-+.+.||++||++ ++.. ..|+|||. +|+
T Consensus 66 g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~-~G~ 109 (146)
T 3obq_A 66 GNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDA-NGK 109 (146)
T ss_dssp SCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCT-TCB
T ss_pred CccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCC-CCC
Confidence 44454 4677899999999999 5544 47999998 773
No 117
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=88.23 E-value=0.45 Score=31.85 Aligned_cols=24 Identities=17% Similarity=0.322 Sum_probs=21.8
Q ss_pred EEEEEEEcCCCCCCCCCceeEeee
Q psy11956 50 VWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 50 ~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
.+.+.|.+|.+||..+|.+.....
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 789999999999999999987764
No 118
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=82.46 E-value=3 Score=28.97 Aligned_cols=59 Identities=15% Similarity=0.022 Sum_probs=42.1
Q ss_pred hHHHHHHHHHHhcCCCcccccCcccEEEEEECCCCCCCCCCEEEEEEEcCCCCCCCCCceeEeee
Q psy11956 9 RRMNIDVIKLIESKHEGTTLKGLKEFCVKFFGPRDTPYEGGVWKVRVHLPEHYPFKSPSIGFMNK 73 (126)
Q Consensus 9 ~RL~~e~~~l~~~~~~~~~~~~~~~w~~~i~gp~~t~y~gg~f~~~i~~p~~yP~~pP~v~f~t~ 73 (126)
.+|.+|+.++-=+....+ ..++....+.+.. =.|....++|.++.+||.++|.+...-+
T Consensus 4 ~~li~Ei~~iGW~~l~~i-d~~~~~i~l~~~D-----~~gR~H~l~v~l~~~yp~~~P~~~~DlP 62 (186)
T 3zqs_A 4 SSLIEEIGTLGWDKLVYA-DTCFSTIKLKAED-----ASGREHLITLKLKAKYPAESPDYFVDFP 62 (186)
T ss_dssp CSHHHHHHHHCGGGEEEE-CTTSSEEEEEEEC-----TTSCEEEEEEECCTTTTTSCCEEECCCS
T ss_pred HHHHHHHHHhCCceeeee-cCCccEEEEEEEe-----CCCCeEEEEEEECCCCCCCCCeeEEcCC
Confidence 467888888844333332 2567777777773 2367788999999999999998766544
No 119
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=44.51 E-value=12 Score=16.87 Aligned_cols=19 Identities=11% Similarity=0.191 Sum_probs=15.1
Q ss_pred hhhHHHHHHHHHHhcCCCc
Q psy11956 7 GNRRMNIDVIKLIESKHEG 25 (126)
Q Consensus 7 ~~~RL~~e~~~l~~~~~~~ 25 (126)
-.-||.-|+...|.+++.+
T Consensus 6 eldrlllelnavqhnppsg 24 (26)
T 3u3c_B 6 ELDRLLLELNAVQHNPPSG 24 (26)
T ss_pred HHHHHHHHHhhhccCCCCC
Confidence 4678888999998888765
No 120
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=31.15 E-value=22 Score=16.51 Aligned_cols=13 Identities=15% Similarity=0.138 Sum_probs=8.2
Q ss_pred hhHHHHHHHHHHh
Q psy11956 8 NRRMNIDVIKLIE 20 (126)
Q Consensus 8 ~~RL~~e~~~l~~ 20 (126)
.|++++||..|++
T Consensus 12 KR~lLkeyY~L~~ 24 (26)
T 2c5k_P 12 RRLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHhhhc
Confidence 5667788887765
No 121
>2rf4_B DNA-directed RNA polymerase I subunit RPA4; transferase DNA/RNA, DNA-binding, phosphorylation, POL I, POLI, rpoli, nuclear protein; 3.10A {Saccharomyces cerevisiae}
Probab=30.73 E-value=19 Score=21.74 Aligned_cols=13 Identities=23% Similarity=0.281 Sum_probs=9.6
Q ss_pred hhhhHHHHHHHHH
Q psy11956 6 AGNRRMNIDVIKL 18 (126)
Q Consensus 6 ~~~~RL~~e~~~l 18 (126)
.-+||+++||+-|
T Consensus 62 sQLKRvQRdlrGL 74 (87)
T 2rf4_B 62 SQLKRIQRDFKGL 74 (87)
T ss_dssp HHHHHHHHHHHHS
T ss_pred HHHHHHHHhhcCC
Confidence 3468888888765
No 122
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=25.72 E-value=38 Score=17.29 Aligned_cols=15 Identities=7% Similarity=0.301 Sum_probs=11.6
Q ss_pred hhhhHHHHHHHHHHh
Q psy11956 6 AGNRRMNIDVIKLIE 20 (126)
Q Consensus 6 ~~~~RL~~e~~~l~~ 20 (126)
...+|+..|++++++
T Consensus 28 ~~~~~~~~~~~~~~~ 42 (42)
T 3g9r_A 28 SKIKRIENEIKRIKK 42 (42)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC
Confidence 357899999998753
No 123
>3zs9_C Golgi to ER traffic protein 2; hydrolase-transport protein complex, membrane protein, targe factor; HET: ADP; 2.10A {Saccharomyces cerevisiae}
Probab=25.49 E-value=53 Score=16.63 Aligned_cols=19 Identities=26% Similarity=0.218 Sum_probs=11.7
Q ss_pred CCC-chhhhhHHHHHHHHHH
Q psy11956 1 MSS-ASAGNRRMNIDVIKLI 19 (126)
Q Consensus 1 Ms~-~~~~~~RL~~e~~~l~ 19 (126)
||. +..-.+||.+|-++-+
T Consensus 1 msels~~ekaRlrRERR~aK 20 (38)
T 3zs9_C 1 MSELTEAEKRRLLRERRQKK 20 (38)
T ss_dssp ---CCHHHHHHHHHHHHHHH
T ss_pred CcccCHHHHHHHHHHHHHHH
Confidence 553 3567889999987654
No 124
>2zzj_A Glucuronan lyase A; beta-jelly roll; HET: CIT; 1.80A {Trichoderma reesei}
Probab=25.15 E-value=1.2e+02 Score=21.61 Aligned_cols=45 Identities=16% Similarity=0.266 Sum_probs=27.3
Q ss_pred CEEEEEEEcCCCCCCCCCceeEeeeccccccccccceeeeCceeeEEEEe
Q psy11956 49 GVWKVRVHLPEHYPFKSPSIGFMNKMYHPNIDEVSAVFYYGGVWKVRVHL 98 (126)
Q Consensus 49 g~f~~~i~~p~~yP~~pP~v~f~t~i~Hpnv~~~~g~ic~~~~w~p~~~~ 98 (126)
..|.+.+.||+++.+.|-.+.+ .-||.+-. .+=|.++.|.|..-+
T Consensus 68 ~~Ygfs~yLp~dW~~~~qs~~i--aQf~~~~~---d~gc~g~~~~P~~~~ 112 (238)
T 2zzj_A 68 QFYGFAFRLSEDWQFQPQSYNI--AQFIANRP---GAGCGGDDWMPSTMI 112 (238)
T ss_dssp EEEEEEEEECTTCCCCSSEEEE--EEEEEECT---TCCCSSSSEEEEEEE
T ss_pred eEEEEEEECchhhcCCCcceEE--EEeeccCC---CCCccccCCCCceeE
Confidence 3588999999999986633333 33555433 233656666664443
No 125
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=24.45 E-value=96 Score=17.00 Aligned_cols=11 Identities=45% Similarity=1.044 Sum_probs=8.5
Q ss_pred EEEEcCCCCCC
Q psy11956 53 VRVHLPEHYPF 63 (126)
Q Consensus 53 ~~i~~p~~yP~ 63 (126)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 56678999983
No 126
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=23.95 E-value=73 Score=22.20 Aligned_cols=26 Identities=23% Similarity=0.496 Sum_probs=21.8
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCceeEee
Q psy11956 47 EGGVWKVRVHLPEHYPF-----KSPSIGFMN 72 (126)
Q Consensus 47 ~gg~f~~~i~~p~~yP~-----~pP~v~f~t 72 (126)
+.|.|.|+-.+|--||. .||-|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46889999999999998 788887764
Done!