Query psy11963
Match_columns 172
No_of_seqs 208 out of 1929
Neff 9.8
Searched_HMMs 46136
Date Fri Aug 16 23:27:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11963.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11963hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG3321 Polyketide synthase mo 100.0 1.3E-28 2.7E-33 211.9 8.0 151 14-171 6-165 (1061)
2 TIGR02813 omega_3_PfaA polyket 99.9 2.7E-22 5.8E-27 182.9 9.4 149 14-171 9-197 (2582)
3 KOG1202|consensus 99.8 1.3E-19 2.8E-24 152.4 4.8 152 11-171 8-161 (2376)
4 PRK08722 3-oxoacyl-(acyl carri 99.8 2E-18 4.3E-23 136.9 10.4 144 13-171 5-155 (414)
5 smart00825 PKS_KS Beta-ketoacy 99.8 2.1E-18 4.6E-23 137.3 10.0 150 15-171 2-161 (424)
6 cd00833 PKS polyketide synthas 99.8 6.6E-18 1.4E-22 134.3 10.2 150 15-171 4-161 (421)
7 cd00832 CLF Chain-length facto 99.7 7.7E-18 1.7E-22 133.1 10.2 142 15-171 4-152 (399)
8 PRK07314 3-oxoacyl-(acyl carri 99.7 7.7E-18 1.7E-22 133.7 9.0 143 14-171 4-153 (411)
9 PF00109 ketoacyl-synt: Beta-k 99.7 3E-18 6.5E-23 127.7 5.5 148 15-171 5-167 (254)
10 PRK06333 3-oxoacyl-(acyl carri 99.7 2.7E-17 5.8E-22 131.1 9.1 146 14-171 6-164 (424)
11 TIGR03150 fabF beta-ketoacyl-a 99.7 7.5E-17 1.6E-21 127.8 9.2 142 15-171 4-152 (407)
12 PRK08439 3-oxoacyl-(acyl carri 99.7 2.5E-16 5.3E-21 124.9 9.8 143 14-171 4-153 (406)
13 PLN02787 3-oxoacyl-[acyl-carri 99.7 8E-16 1.7E-20 125.0 10.3 144 13-171 130-282 (540)
14 KOG1394|consensus 99.6 3.2E-16 6.9E-21 118.1 7.0 150 7-171 19-178 (440)
15 PLN02836 3-oxoacyl-[acyl-carri 99.6 7.6E-16 1.7E-20 123.1 8.4 147 14-171 8-175 (437)
16 PRK09116 3-oxoacyl-(acyl carri 99.6 1.3E-15 2.8E-20 120.6 9.3 142 15-171 5-155 (405)
17 cd00834 KAS_I_II Beta-ketoacyl 99.6 1.1E-15 2.4E-20 121.1 8.8 142 15-171 4-152 (406)
18 PRK07910 3-oxoacyl-(acyl carri 99.6 1.5E-15 3.2E-20 120.7 9.0 144 12-171 12-162 (418)
19 PRK07967 3-oxoacyl-(acyl carri 99.6 3.3E-15 7.1E-20 118.2 9.5 141 15-171 5-153 (406)
20 PRK07103 polyketide beta-ketoa 99.5 5.2E-14 1.1E-18 111.8 9.2 142 15-171 5-158 (410)
21 PRK06519 3-oxoacyl-(acyl carri 99.5 8.6E-14 1.9E-18 109.8 10.1 140 13-171 7-166 (398)
22 PTZ00050 3-oxoacyl-acyl carrie 99.5 4.8E-14 1E-18 112.3 7.5 133 32-171 7-159 (421)
23 cd00828 elong_cond_enzymes "el 99.5 9.9E-14 2.1E-18 110.1 8.3 140 15-171 4-153 (407)
24 COG0304 FabB 3-oxoacyl-(acyl-c 99.4 1.2E-12 2.6E-17 103.1 9.1 140 15-172 6-154 (412)
25 PRK14691 3-oxoacyl-(acyl carri 98.9 3E-09 6.4E-14 82.6 7.5 75 94-171 1-82 (342)
26 PRK06501 3-oxoacyl-(acyl carri 98.9 6.2E-09 1.3E-13 83.3 8.2 137 14-171 13-166 (425)
27 PRK09185 3-oxoacyl-(acyl carri 98.8 2.1E-08 4.6E-13 79.4 8.8 136 15-171 5-151 (392)
28 PRK05952 3-oxoacyl-(acyl carri 98.7 1E-07 2.2E-12 75.2 7.8 122 15-171 5-137 (381)
29 KOG1202|consensus 98.6 5.5E-08 1.2E-12 83.9 4.8 62 2-63 101-162 (2376)
30 cd00825 decarbox_cond_enzymes 97.9 7.1E-05 1.5E-09 57.8 7.6 75 97-171 11-87 (332)
31 COG3321 Polyketide synthase mo 97.6 2.5E-05 5.4E-10 69.0 1.4 63 1-63 104-166 (1061)
32 PF13723 Ketoacyl-synt_2: Beta 96.6 0.013 2.8E-07 42.9 7.2 76 86-171 23-105 (218)
33 cd00327 cond_enzymes Condensin 93.2 0.27 5.9E-06 36.3 5.5 34 97-134 7-40 (254)
34 PRK08256 lipid-transfer protei 90.3 0.88 1.9E-05 36.3 5.8 36 96-131 21-56 (391)
35 COG0332 FabH 3-oxoacyl-[acyl-c 87.4 0.93 2E-05 35.3 3.9 34 97-134 52-85 (323)
36 smart00825 PKS_KS Beta-ketoacy 86.6 0.2 4.2E-06 40.2 -0.1 31 1-31 100-130 (424)
37 PRK08722 3-oxoacyl-(acyl carri 86.0 0.47 1E-05 38.2 1.8 27 1-27 87-113 (414)
38 TIGR02813 omega_3_PfaA polyket 84.5 0.5 1.1E-05 46.3 1.4 25 1-26 106-130 (2582)
39 cd00832 CLF Chain-length facto 83.0 0.47 1E-05 38.0 0.6 26 1-26 84-109 (399)
40 cd00833 PKS polyketide synthas 82.5 0.42 9.2E-06 38.2 0.1 31 1-31 100-130 (421)
41 PRK07967 3-oxoacyl-(acyl carri 79.2 1.1 2.4E-05 36.0 1.5 26 1-26 84-109 (406)
42 PRK07204 3-oxoacyl-(acyl carri 76.9 4.3 9.2E-05 31.4 4.1 24 97-120 52-75 (329)
43 PRK07108 acetyl-CoA acetyltran 76.9 4.5 9.8E-05 32.4 4.3 31 97-131 27-57 (392)
44 PRK06289 acetyl-CoA acetyltran 76.2 2.6 5.7E-05 33.8 2.8 31 97-131 26-56 (403)
45 PRK06064 acetyl-CoA acetyltran 73.8 3.5 7.7E-05 32.8 3.0 31 97-131 22-52 (389)
46 PRK05790 putative acyltransfer 72.6 3.7 8E-05 32.8 2.8 24 97-120 26-49 (393)
47 PRK09352 3-oxoacyl-(acyl carri 72.4 9.4 0.0002 29.3 5.0 32 96-131 51-82 (319)
48 PRK07937 lipid-transfer protei 72.0 4.3 9.4E-05 32.0 3.0 23 98-120 25-47 (352)
49 PRK12578 acetyl-CoA acetyltran 71.8 4.4 9.5E-05 32.3 3.1 30 97-130 21-50 (385)
50 PRK07516 acetyl-CoA acetyltran 68.6 5.6 0.00012 31.7 3.1 30 97-130 22-51 (389)
51 cd00751 thiolase Thiolase are 68.1 5.6 0.00012 31.7 3.0 30 97-130 22-51 (386)
52 PRK06065 acetyl-CoA acetyltran 67.9 4.8 0.0001 32.3 2.5 29 98-130 30-58 (392)
53 PRK06157 acetyl-CoA acetyltran 66.5 6.5 0.00014 31.5 3.1 29 98-130 28-56 (398)
54 PLN03170 chalcone synthase; Pr 66.5 5.6 0.00012 32.0 2.6 34 86-119 95-128 (401)
55 PLN02836 3-oxoacyl-[acyl-carri 65.8 3.1 6.7E-05 33.8 1.1 26 1-26 106-132 (437)
56 PRK06366 acetyl-CoA acetyltran 65.7 6.8 0.00015 31.3 3.0 23 98-120 27-49 (388)
57 PRK07801 acetyl-CoA acetyltran 64.7 7.4 0.00016 31.0 3.0 23 98-120 27-49 (382)
58 TIGR00747 fabH 3-oxoacyl-(acyl 64.2 6.4 0.00014 30.2 2.5 31 97-131 51-81 (318)
59 PLN02644 acetyl-CoA C-acetyltr 64.1 7.5 0.00016 31.1 3.0 28 98-129 26-53 (394)
60 PRK07515 3-oxoacyl-(acyl carri 63.7 7.5 0.00016 30.7 2.9 32 96-131 94-125 (372)
61 PRK08304 stage V sporulation p 63.5 5.7 0.00012 31.1 2.1 24 97-120 56-79 (337)
62 PRK07314 3-oxoacyl-(acyl carri 63.3 4.9 0.00011 32.2 1.8 24 1-24 85-108 (411)
63 PRK05656 acetyl-CoA acetyltran 63.3 7.9 0.00017 31.0 3.0 29 98-130 27-55 (393)
64 PLN03172 chalcone synthase fam 63.2 6.5 0.00014 31.5 2.5 34 86-119 91-124 (393)
65 PRK07855 lipid-transfer protei 62.2 5 0.00011 32.1 1.6 23 98-120 25-47 (386)
66 PRK06205 acetyl-CoA acetyltran 62.0 6.5 0.00014 31.6 2.3 29 98-130 27-55 (404)
67 PRK08439 3-oxoacyl-(acyl carri 61.9 4.7 0.0001 32.3 1.5 26 1-26 85-110 (406)
68 TIGR00748 HMG_CoA_syn_Arc hydr 60.5 6.9 0.00015 30.7 2.1 31 97-131 50-80 (345)
69 TIGR02845 spore_V_AD stage V s 60.1 7.2 0.00016 30.4 2.1 23 98-120 51-73 (327)
70 PRK08313 acetyl-CoA acetyltran 58.9 6.2 0.00013 31.5 1.6 29 98-130 25-53 (386)
71 PRK08142 acetyl-CoA acetyltran 58.9 6.2 0.00013 31.6 1.6 24 98-121 26-49 (388)
72 PRK06158 thiolase; Provisional 57.5 6.7 0.00015 31.3 1.6 29 98-130 29-57 (384)
73 PLN03173 chalcone synthase; Pr 57.4 8 0.00017 31.0 2.0 35 86-120 91-125 (391)
74 PRK06066 acetyl-CoA acetyltran 57.0 9.6 0.00021 30.5 2.4 23 98-120 26-50 (385)
75 PRK12404 stage V sporulation p 56.3 9.2 0.0002 29.9 2.1 23 98-120 55-77 (334)
76 PRK08170 acetyl-CoA acetyltran 56.1 12 0.00026 30.3 2.9 28 98-129 28-55 (426)
77 PRK06365 acetyl-CoA acetyltran 55.7 10 0.00023 30.8 2.5 23 98-120 38-60 (430)
78 PLN03168 chalcone synthase; Pr 55.5 9 0.00019 30.7 2.0 35 86-120 90-124 (389)
79 PRK06445 acetyl-CoA acetyltran 55.4 11 0.00024 30.2 2.6 24 98-121 33-56 (394)
80 cd00834 KAS_I_II Beta-ketoacyl 55.2 7.9 0.00017 30.8 1.7 26 1-26 84-109 (406)
81 cd00828 elong_cond_enzymes "el 54.9 8.9 0.00019 30.6 2.0 26 1-26 85-111 (407)
82 PTZ00455 3-ketoacyl-CoA thiola 54.8 15 0.00032 30.0 3.2 23 98-120 49-73 (438)
83 PRK05963 3-oxoacyl-(acyl carri 54.5 9.3 0.0002 29.5 2.0 24 97-120 52-75 (326)
84 TIGR03150 fabF beta-ketoacyl-a 54.3 8.9 0.00019 30.5 1.9 25 1-25 84-108 (407)
85 PTZ00050 3-oxoacyl-acyl carrie 54.1 4.4 9.5E-05 32.7 0.1 27 1-27 90-117 (421)
86 PRK07851 acetyl-CoA acetyltran 53.7 15 0.00032 29.6 3.0 23 98-120 28-51 (406)
87 PRK08257 acetyl-CoA acetyltran 53.6 14 0.00029 30.8 2.8 23 98-120 28-52 (498)
88 PRK08235 acetyl-CoA acetyltran 52.8 13 0.00028 29.8 2.6 29 98-130 27-55 (393)
89 PRK12880 3-oxoacyl-(acyl carri 52.8 10 0.00022 29.9 1.9 23 97-119 60-82 (353)
90 PF00109 ketoacyl-synt: Beta-k 52.7 2.7 5.8E-05 31.0 -1.2 27 1-27 100-127 (254)
91 TIGR01930 AcCoA-C-Actrans acet 52.5 9 0.00019 30.6 1.6 24 97-120 21-44 (386)
92 KOG1406|consensus 51.6 15 0.00032 28.0 2.5 50 100-149 32-81 (408)
93 PRK04262 hypothetical protein; 51.3 12 0.00026 29.3 2.1 31 97-131 51-81 (347)
94 cd00829 SCP-x_thiolase Thiolas 50.3 10 0.00022 29.9 1.6 30 97-130 16-45 (375)
95 PLN03171 chalcone synthase-lik 50.1 12 0.00027 30.0 2.0 34 87-120 98-131 (399)
96 PF00195 Chal_sti_synt_N: Chal 49.1 26 0.00055 26.0 3.4 32 89-120 92-123 (226)
97 PRK06059 lipid-transfer protei 49.0 11 0.00024 30.2 1.6 23 98-120 24-46 (399)
98 PRK06954 acetyl-CoA acetyltran 48.7 19 0.00041 28.9 2.9 28 98-129 32-59 (397)
99 PRK06147 3-oxoacyl-(acyl carri 46.5 75 0.0016 25.0 5.9 33 95-131 63-95 (348)
100 PLN03169 chalcone synthase fam 46.0 17 0.00038 29.1 2.3 25 95-119 104-128 (391)
101 PLN02577 hydroxymethylglutaryl 44.6 16 0.00035 30.0 2.0 32 97-132 53-84 (459)
102 cd00830 KAS_III Ketoacyl-acyl 43.9 18 0.0004 27.6 2.1 25 96-120 49-73 (320)
103 PRK06840 hypothetical protein; 43.5 16 0.00035 28.4 1.7 23 97-119 53-75 (339)
104 cd00831 CHS_like Chalcone and 43.5 18 0.00038 28.5 2.0 29 91-119 79-107 (361)
105 PRK12879 3-oxoacyl-(acyl carri 42.9 19 0.00042 27.6 2.1 23 97-119 53-75 (325)
106 PRK09052 acetyl-CoA acetyltran 42.2 22 0.00047 28.6 2.3 29 98-130 32-61 (399)
107 PF10819 DUF2564: Protein of u 41.9 24 0.00051 21.4 1.9 19 92-113 24-42 (79)
108 PLN02326 3-oxoacyl-[acyl-carri 41.6 22 0.00048 28.3 2.3 24 96-119 95-118 (379)
109 PRK09258 3-oxoacyl-(acyl carri 40.8 18 0.00039 28.0 1.6 24 97-120 61-84 (338)
110 CHL00203 fabH 3-oxoacyl-acyl-c 40.7 22 0.00048 27.5 2.1 24 97-120 51-74 (326)
111 PRK09051 beta-ketothiolase; Pr 40.5 23 0.0005 28.4 2.3 23 98-120 28-50 (394)
112 PRK06333 3-oxoacyl-(acyl carri 39.7 20 0.00043 28.9 1.8 26 1-26 95-121 (424)
113 cd00826 nondecarbox_cond_enzym 38.4 33 0.00072 27.5 2.9 32 96-131 22-53 (393)
114 PRK08963 fadI 3-ketoacyl-CoA t 38.0 35 0.00076 27.7 3.0 23 98-120 30-52 (428)
115 PLN02287 3-ketoacyl-CoA thiola 35.5 29 0.00063 28.5 2.1 24 98-121 72-95 (452)
116 PLN02787 3-oxoacyl-[acyl-carri 34.4 27 0.00059 29.4 1.8 25 1-25 212-239 (540)
117 PRK07850 acetyl-CoA acetyltran 33.1 47 0.001 26.6 2.9 28 98-129 27-54 (387)
118 PRK06816 3-oxoacyl-(acyl carri 32.7 34 0.00074 27.2 2.1 24 97-120 63-86 (378)
119 cd00827 init_cond_enzymes "ini 32.3 37 0.00079 26.0 2.1 31 97-131 48-78 (324)
120 PF02801 Ketoacyl-synt_C: Beta 29.8 32 0.0007 22.2 1.3 24 101-129 27-50 (119)
121 PRK07661 acetyl-CoA acetyltran 28.7 75 0.0016 25.5 3.4 28 98-129 28-55 (391)
122 PF06059 DUF930: Domain of Unk 27.9 69 0.0015 20.5 2.5 22 92-113 2-23 (101)
123 TIGR02446 FadI fatty oxidation 27.3 1.2E+02 0.0025 24.8 4.3 28 98-129 32-59 (430)
124 PLN02932 3-ketoacyl-CoA syntha 27.2 50 0.0011 27.4 2.2 25 95-119 146-170 (478)
125 PRK06519 3-oxoacyl-(acyl carri 27.1 50 0.0011 26.6 2.1 25 1-25 86-110 (398)
126 PRK06633 acetyl-CoA acetyltran 27.0 45 0.00098 26.8 1.9 24 98-121 28-51 (392)
127 PRK08131 acetyl-CoA acetyltran 27.0 49 0.0011 26.7 2.1 24 98-121 27-50 (401)
128 TIGR01833 HMG-CoA-S_euk 3-hydr 26.1 50 0.0011 27.2 2.0 32 97-132 50-81 (454)
129 TIGR02863 spore_sspJ small, ac 24.4 40 0.00086 17.8 0.7 11 104-114 19-29 (47)
130 PRK09268 acetyl-CoA acetyltran 22.6 65 0.0014 26.2 2.0 24 98-121 32-55 (427)
131 PRK08242 acetyl-CoA acetyltran 20.8 69 0.0015 25.9 1.8 24 98-121 29-52 (402)
132 PF06135 DUF965: Bacterial pro 20.4 1.5E+02 0.0032 18.0 2.7 20 97-116 16-35 (79)
No 1
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.95 E-value=1.3e-28 Score=211.86 Aligned_cols=151 Identities=28% Similarity=0.480 Sum_probs=135.4
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCC---------CCCCCcccCCcCCCCcccc
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYG---------APSRTGKIKDIASFDAEFF 84 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~~fd~~~~ 84 (172)
-..|+|+|+||+..+ ++.| |+.+.+|++.+..+|.+||+++.+|+ +++++||++++..||+.||
T Consensus 6 IAIiGm~~rfPga~~-----~~~~--W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fF 78 (1061)
T COG3321 6 IAIIGMACRFPGADS-----PEEF--WDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFF 78 (1061)
T ss_pred EEEEeccccCCCCCC-----HHHH--HHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHc
Confidence 457888899998554 7789 99999999999999999999998886 3578999999999999999
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHH
Q psy11963 85 GIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLS 164 (172)
Q Consensus 85 ~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 164 (172)
+|+|+|+..||||||++|+++|+|||||||.+..+.+.++|||+|.+..+|..+.........++...++..+++++|||
T Consensus 79 gisPrEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Ris 158 (1061)
T COG3321 79 GISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRIS 158 (1061)
T ss_pred CCCHHHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987654332267788889999999999999
Q ss_pred HHhCCCC
Q psy11963 165 YAFNFSV 171 (172)
Q Consensus 165 ~~~~l~~ 171 (172)
+.|||++
T Consensus 159 y~l~l~G 165 (1061)
T COG3321 159 YVLGLSG 165 (1061)
T ss_pred HHhcCCC
Confidence 9999986
No 2
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=99.87 E-value=2.7e-22 Score=182.89 Aligned_cols=149 Identities=14% Similarity=0.211 Sum_probs=120.1
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCC---------CCCCCcccCCcCCCCcccc
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYG---------APSRTGKIKDIASFDAEFF 84 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~~fd~~~~ 84 (172)
...|||||.+|+..+ .+.| |++|.+|++.+++++..||+.+.+|+ +++++||++++ +||+.+|
T Consensus 9 IAIvGmg~~~P~a~~-----~~~f--W~~L~~G~~~i~~ip~~rw~~~~~~~~~~~~~~~~~~~~ggfl~~v-~FD~~~F 80 (2582)
T TIGR02813 9 IAIVGMASIFANSRY-----LNKF--WDLIFEKIDAITDVPSDHWAKDDYYDSDKSEADKSYCKRGGFLPEV-DFNPMEF 80 (2582)
T ss_pred EEEEeeeeeCCCCCC-----HHHH--HHHHHcCCCccCCCChhhCChhhccCccccccCCcccceeEecCcc-CCCHhhc
Confidence 457888999998655 6778 99999999999999888898877664 35678999988 5999999
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHH--------------HH------------
Q psy11963 85 GIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEAN--------------DF------------ 138 (172)
Q Consensus 85 ~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~--------------~~------------ 138 (172)
+|++++++.|||+||++|++++|||+||||... +++.|+|||+|++...+. ..
T Consensus 81 ~i~p~ea~~mDpqqrl~L~~a~eALedAG~~~~-~~~~r~GV~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (2582)
T TIGR02813 81 GLPPNILELTDISQLLSLVVAKEVLNDAGLPDG-YDRDKIGITLGVGGGQKQSSSLNARLQYPVLKKVFKASGVEDEDSE 159 (2582)
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHhCCCCCC-CCCCCEEEEEEECCCcccchhhhhhhcchhhhhhhhccccchhhHH
Confidence 999999999999999999999999999999643 778899999997643211 00
Q ss_pred --h---ccCCCCCCccccccchhhHHHhHHHHHhCCCC
Q psy11963 139 --A---EGNPEKLTGYETIGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 139 --~---~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~~ 171 (172)
. ......+.+..+++.+.|++++|||++|||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~g~~~n~~A~RIS~~f~L~G 197 (2582)
T TIGR02813 160 MLIKKFQDQYIHWEENSFPGSLGNVISGRIANRFDLGG 197 (2582)
T ss_pred HhhhhhcccccccCccccccccccHHHHHHHHHhCCCC
Confidence 0 00011244566788999999999999999987
No 3
>KOG1202|consensus
Probab=99.78 E-value=1.3e-19 Score=152.38 Aligned_cols=152 Identities=41% Similarity=0.762 Sum_probs=123.4
Q ss_pred CCCcceEEEeeec--CccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCH
Q psy11963 11 RGTRTGVYIGLMT--TEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHS 88 (172)
Q Consensus 11 ~~~~~~V~vg~~~--~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~ 88 (172)
.+..-.|.-|++. |...+ ...| |+++..+.++..+-+. || ..|+|+-+++.|-+++...||+.+|+.++
T Consensus 8 ~~~edIvIsG~sgklPes~n-----v~eF--~~nLl~g~DmVtdd~r-rW-~~G~ygLP~r~gKlKdL~kFDa~ff~vh~ 78 (2376)
T KOG1202|consen 8 EKQEDIVISGMSGKLPESDN-----VKEF--GDNLLAGVDMVTDDPR-RW-EAGLYGLPKRSGKLKDLNKFDAGFFGVHP 78 (2376)
T ss_pred ccCCcEEEeccCCCCCCccc-----HHHH--hhhhhcccccccCCcc-cc-cccccCCchhhcchhhhhhhcccccCcCc
Confidence 3444555555444 44444 4455 6666666665544332 22 46788888899999999999999999999
Q ss_pred HHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHHHHhC
Q psy11963 89 KLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFN 168 (172)
Q Consensus 89 ~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~ 168 (172)
|++..||||-|++|++++||+-|||+.|..+.++|+|||+|.+..+-.....++++.+..|.+++..+++.++|||+.|+
T Consensus 79 KQa~~MDPq~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFD 158 (2376)
T KOG1202|consen 79 KQANTMDPQLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFD 158 (2376)
T ss_pred ccccccCHHHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEe
Confidence 99999999999999999999999999999999999999999887776666777888899999999999999999999999
Q ss_pred CCC
Q psy11963 169 FSV 171 (172)
Q Consensus 169 l~~ 171 (172)
|++
T Consensus 159 fqG 161 (2376)
T KOG1202|consen 159 FQG 161 (2376)
T ss_pred ccC
Confidence 986
No 4
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.77 E-value=2e-18 Score=136.90 Aligned_cols=144 Identities=19% Similarity=0.247 Sum_probs=114.2
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHh
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLAN 92 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~ 92 (172)
....+++|+.+|...+ .+.+ |+.|.+|++.++... +|+...+ ....+|.+ ++||+..| +++++++
T Consensus 5 ~VvItG~g~~~p~g~~-----~~~~--w~~L~~g~s~i~~~~--~~~~~~~--~~~~~g~i---~~~~~~~~-~~~~~~~ 69 (414)
T PRK08722 5 RVVVTGMGMLSPVGNT-----VESS--WKALLAGQSGIVNIE--HFDTTNF--STRFAGLV---KDFNCEEY-MSKKDAR 69 (414)
T ss_pred CEEEEeeEEECCCCCC-----HHHH--HHHHHhCCCeeeecC--ccccccC--CCceeEEc---CCCChhHc-CCHHHHh
Confidence 3456778888887765 5678 999999999887654 3554444 33445544 46998888 8999999
Q ss_pred hcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHH
Q psy11963 93 VMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSY 165 (172)
Q Consensus 93 ~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 165 (172)
.|||++++++.+++|||+|||++....+..|+||++|++... +..+...++..++++.++..++|.++++||+
T Consensus 70 ~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 149 (414)
T PRK08722 70 KMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSI 149 (414)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHH
Confidence 999999999999999999999987777788999999976432 3334455667788999999999999999999
Q ss_pred HhCCCC
Q psy11963 166 AFNFSV 171 (172)
Q Consensus 166 ~~~l~~ 171 (172)
.||+++
T Consensus 150 ~~gl~G 155 (414)
T PRK08722 150 MRGLRG 155 (414)
T ss_pred HhCCCC
Confidence 999986
No 5
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.77 E-value=2.1e-18 Score=137.34 Aligned_cols=150 Identities=33% Similarity=0.631 Sum_probs=125.5
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCC----------CCCCCcccCCcCCCCcccc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYG----------APSRTGKIKDIASFDAEFF 84 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~----------~~~~~~~~~~v~~fd~~~~ 84 (172)
..++||+..|...+ .+.+ |+.+..|++.+...+..+|+...++. .+..++.++++.+||+..|
T Consensus 2 ~ItG~g~~~p~g~~-----~~~~--~~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~d~~~~ 74 (424)
T smart00825 2 AIVGMSCRFPGADS-----PEEF--WDLLREGRDAITEIPADRWDADAFYYDPDPDRPGKSYVRWGGFLDDVDLFDAAFF 74 (424)
T ss_pred EEEEEEeeCCCCCC-----HHHH--HHHHHcCCcccccCChHHcCccccccccccccCCCcccccceecCchhhCCHhHc
Confidence 35788988887655 5677 99999999998877655565444321 3456777778878999999
Q ss_pred CCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHH
Q psy11963 85 GIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLS 164 (172)
Q Consensus 85 ~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 164 (172)
++++++.+.|+++++++++++.+||+|||+++..+++.|+||++|+...+|.......+..+.++.....+.+..+++|+
T Consensus 75 ~i~~~~~~~~~~~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 154 (424)
T smart00825 75 GISPREAEAMDPQQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRIS 154 (424)
T ss_pred CCCHHHHHhcCHHHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHH
Confidence 99999999999999999999999999999988888888999999999888887777777778888888888999999999
Q ss_pred HHhCCCC
Q psy11963 165 YAFNFSV 171 (172)
Q Consensus 165 ~~~~l~~ 171 (172)
..||+++
T Consensus 155 ~~lgl~g 161 (424)
T smart00825 155 YFFDLRG 161 (424)
T ss_pred HHhCCCC
Confidence 9999975
No 6
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.75 E-value=6.6e-18 Score=134.29 Aligned_cols=150 Identities=34% Similarity=0.641 Sum_probs=126.2
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCC--------CCCCCCcccCCcCCCCccccCC
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLY--------GAPSRTGKIKDIASFDAEFFGI 86 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~--------~~~~~~~~~~~v~~fd~~~~~~ 86 (172)
..++||+.+|...+ .+.+ |+.+.++++.+...+..+|+..+++ ..+..+++++++..||+..|++
T Consensus 4 ~ItG~g~~~p~g~~-----~~~~--~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~ 76 (421)
T cd00833 4 AIVGMACRFPGAAD-----PDEF--WENLLEGRDAISEIPEDRWDADGYYPDPGKPGKTYTRRGGFLDDVDAFDAAFFGI 76 (421)
T ss_pred EEEceeeECCCCCC-----HHHH--HHHHHcCCCcCcCCChhHcCccccccccccCCCcceecceecCCcccCCHhHcCC
Confidence 46788888888776 5667 9999999999988776666654432 1345678888887899988889
Q ss_pred CHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 87 HSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 87 ~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
++++++.|+++++++++++.+||+|||+.+..++..++||++|+...+|..........+.++.....+.+.++++|++.
T Consensus 77 ~~~~~~~~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~ 156 (421)
T cd00833 77 SPREAEAMDPQQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYF 156 (421)
T ss_pred CHHHHHhcCHHHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHH
Confidence 99999999999999999999999999998888888999999999988888777666666788888888899999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
+|+++
T Consensus 157 ~gl~g 161 (421)
T cd00833 157 FDLRG 161 (421)
T ss_pred cCCCC
Confidence 99875
No 7
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=99.75 E-value=7.7e-18 Score=133.06 Aligned_cols=142 Identities=18% Similarity=0.261 Sum_probs=112.0
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVM 94 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~ 94 (172)
..+++|+.+|...+ .+.+ |+.|.++++.+.... +|+..++ +++.++. +.+||+.++ +++++.+.|
T Consensus 4 vItG~G~vsp~G~~-----~~~~--w~~L~~G~s~i~~~~--~~~~~~~--~~~~~g~---i~~~~~~~~-~~~~~~~~~ 68 (399)
T cd00832 4 VVTGIGVVAPNGLG-----VEEY--WKAVLDGRSGLGPIT--RFDPSGY--PARLAGE---VPDFDAAEH-LPGRLLPQT 68 (399)
T ss_pred EEEeeEEeCCCCCC-----HHHH--HHHHHhCCCeEeeCC--ccccccC--CCceeEE---eCCcChhhc-CCHHHHhhC
Confidence 46788888887765 5678 999999999987553 4655544 2333443 456887765 999999999
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHHHh
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSYAF 167 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 167 (172)
||++++++.+++|||+|||+++..+++.|+||++|+.... +..+...++..++++..+..+.+.++++||+.|
T Consensus 69 d~~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (399)
T cd00832 69 DRMTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRH 148 (399)
T ss_pred CHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHh
Confidence 9999999999999999999988778888999999976543 233445566777888888888999999999999
Q ss_pred CCCC
Q psy11963 168 NFSV 171 (172)
Q Consensus 168 ~l~~ 171 (172)
|+++
T Consensus 149 gl~G 152 (399)
T cd00832 149 GMRG 152 (399)
T ss_pred CCCC
Confidence 9986
No 8
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.74 E-value=7.7e-18 Score=133.67 Aligned_cols=143 Identities=19% Similarity=0.256 Sum_probs=113.2
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.|.++++.++..+ +|+..+. ....+|. +++||+..| +++++++.
T Consensus 4 v~ItG~g~~~p~g~~-----~~~~--w~~l~~g~~~~~~~~--~~~~~~~--~~~~~g~---i~~f~~~~~-~~~~~~~~ 68 (411)
T PRK07314 4 VVVTGLGAVSPLGND-----VEST--WKNLLAGKSGIGPIT--HFDTSDL--AVKIAGE---VKDFNPDDY-MSRKEARR 68 (411)
T ss_pred EEEEcceEECCCcCC-----HHHH--HHHHHhCCCcEEECC--cccccCC--CccEEEE---eCCcChhhc-CCHHHhhc
Confidence 356788899998766 5678 999999999887655 3544433 2334454 457998888 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch-------hHHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT-------EANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||+++.++++.|+||++|++.. .+..+...++..+.|+.++..+.+.++++|++.
T Consensus 69 ~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (411)
T PRK07314 69 MDRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIR 148 (411)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHH
Confidence 9999999999999999999999888888999999997532 233344556667788888888899999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 149 ~gl~G 153 (411)
T PRK07314 149 YGAKG 153 (411)
T ss_pred hCCCC
Confidence 99975
No 9
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=99.73 E-value=3e-18 Score=127.71 Aligned_cols=148 Identities=26% Similarity=0.417 Sum_probs=110.1
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCC---------CCCCcccCCcCCCCccccC
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGA---------PSRTGKIKDIASFDAEFFG 85 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~---------~~~~~~~~~v~~fd~~~~~ 85 (172)
..+++|+.+|...+ .+.+ |+.|..+++.+...+. +|+...++.. .+++++++ ...||+..++
T Consensus 5 ~ItG~g~~~p~g~~-----~~~~--w~~L~~g~~~~~~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 75 (254)
T PF00109_consen 5 VITGMGCVTPGGDG-----LEEF--WEALLSGRSGIRPIPE-RWDPSDYYDPPSRVAGEIDDKKGGFID-DFDFDAYFFG 75 (254)
T ss_dssp EEEEEEEEBTTBSS-----HHHH--HHHHHTT---EEESCS-SSCHTTSTTSSCSEEECBSSSEESSST-TTCGGGTSTC
T ss_pred EEEEEEEECcCCCC-----HHHH--HhhhccCceeeeeecc-ccccccccccCCcccccccccccceee-eccccccccc
Confidence 46788999998876 5678 9999999999987776 6776666421 22345555 6789998888
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCC-cceEEEcccchhHH---HHhccC--CCCCCccccccchhhHH
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGT-RTGVYIGLMTTEAN---DFAEGN--PEKLTGYETIGSTRAML 159 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~-r~gv~vG~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~ 159 (172)
+++++++.|||++++++.++.+||+|||+....++.. |+||++|++..++. .+.... .....|+.+...++|.+
T Consensus 76 ~~~~~~~~~~~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (254)
T PF00109_consen 76 IPPREARRMDRQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSA 155 (254)
T ss_dssp HHHHHHHTS-HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHH
T ss_pred ccchhhhhhhhhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCccccccc
Confidence 9999999999999999999999999999987666665 59999998877543 233232 34455544545689999
Q ss_pred HhHHHHHhCCCC
Q psy11963 160 ANRLSYAFNFSV 171 (172)
Q Consensus 160 a~~is~~~~l~~ 171 (172)
+++||+.||+++
T Consensus 156 a~~ia~~~gl~G 167 (254)
T PF00109_consen 156 AGRIAILFGLRG 167 (254)
T ss_dssp HHHHHHHHTB-S
T ss_pred ccchhhhcCCCC
Confidence 999999999986
No 10
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.72 E-value=2.7e-17 Score=131.09 Aligned_cols=146 Identities=18% Similarity=0.309 Sum_probs=114.1
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCc-----CCCCccccCCCH
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDI-----ASFDAEFFGIHS 88 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v-----~~fd~~~~~~~~ 88 (172)
...+++||.+|...+ .+.+ |+.+.+|++.+...+.++ .... .++.+|.+++. ..||+..| +++
T Consensus 6 V~ItG~g~~~p~g~~-----~~~~--w~~l~~G~s~i~~~~~~~--~~~~--~~~~~g~i~~~~~~~~~~fd~~~~-i~~ 73 (424)
T PRK06333 6 IVVTGMGAVSPLGCG-----VETF--WQRLLAGQSGIRTLTDFP--VGDL--ATKIGGQVPDLAEDAEAGFDPDRY-LDP 73 (424)
T ss_pred EEEEcceEECCCCCC-----HHHH--HHHHHcCCCeEEeCCccc--ccCC--CCceEEEeccccccccccCChhHc-CCH
Confidence 356778888887765 5678 999999999988776533 2222 34456666542 23899888 999
Q ss_pred HHHhhcChHHHHHHHHHHHHHHhCCCCCCCC-CCCcceEEEcccchhH-------HHHhccCCCCCCccccccchhhHHH
Q psy11963 89 KLANVMDPQLRMLLELTHESIMDGGFNPEEL-RGTRTGVYIGLMTTEA-------NDFAEGNPEKLTGYETIGSTRAMLA 160 (172)
Q Consensus 89 ~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~-~~~r~gv~vG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a 160 (172)
++++.|||++++++.++++||+|||+++..+ +..|+||++|++...+ ..+...++..++++.++..+.|.++
T Consensus 74 ~~~~~~d~~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 153 (424)
T PRK06333 74 KDQRKMDRFILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAA 153 (424)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHH
Confidence 9999999999999999999999999987766 6789999999764332 2334456667788888899999999
Q ss_pred hHHHHHhCCCC
Q psy11963 161 NRLSYAFNFSV 171 (172)
Q Consensus 161 ~~is~~~~l~~ 171 (172)
++||+.|||++
T Consensus 154 ~~is~~~gl~G 164 (424)
T PRK06333 154 GHVSIRYGFKG 164 (424)
T ss_pred HHHHHHhCCCC
Confidence 99999999986
No 11
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.70 E-value=7.5e-17 Score=127.82 Aligned_cols=142 Identities=24% Similarity=0.303 Sum_probs=112.8
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVM 94 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~ 94 (172)
..+++||.+|...+ .+.+ |+.+.+|++.+.+.+ +|+..+. +.+.+|. +++||+..| +++++.+.|
T Consensus 4 ~ItG~g~~~p~g~~-----~~~~--~~~l~~g~s~~~~~~--~~~~~~~--~~~~~g~---i~~f~~~~~-~~~~~~~~~ 68 (407)
T TIGR03150 4 VVTGLGAVTPLGNG-----VEEF--WENLLAGKSGIGPIT--RFDASDL--PVKIAGE---VKDFDPEDY-IDKKEARRM 68 (407)
T ss_pred EEEcceEECCCcCC-----HHHH--HHHHHcCCCeeEECC--cccccCC--CCcEEEE---eCCcChhhc-CCHHHHhhc
Confidence 46778888887765 5677 999999999887654 3554444 2334444 457999988 999999999
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch-------hHHHHhccCCCCCCccccccchhhHHHhHHHHHh
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT-------EANDFAEGNPEKLTGYETIGSTRAMLANRLSYAF 167 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 167 (172)
||+++++++++++||+|||+.++.++..++||++|+... .+..+...++..++++..+..+.+.++++|++.|
T Consensus 69 ~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 69 DRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred CHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 999999999999999999999888889999999997532 2233444566677888888889999999999999
Q ss_pred CCCC
Q psy11963 168 NFSV 171 (172)
Q Consensus 168 ~l~~ 171 (172)
|+++
T Consensus 149 gl~g 152 (407)
T TIGR03150 149 GAKG 152 (407)
T ss_pred CCCC
Confidence 9975
No 12
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.68 E-value=2.5e-16 Score=124.86 Aligned_cols=143 Identities=21% Similarity=0.254 Sum_probs=113.5
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...++||+.++...+ .+.+ |+.|.+|++.++... +|+..++ .+..+|. +++||+..+ +++++++.
T Consensus 4 v~ItG~g~vsp~G~~-----~~~~--~~~L~~G~s~i~~~~--~~~~~~~--~~~~~g~---i~~f~~~~~-~~~~~~~~ 68 (406)
T PRK08439 4 VVVTGIGMINSLGLN-----KESS--FKAICNGECGIKKIT--LFDASDF--PVQIAGE---ITDFDPTEV-MDPKEVKK 68 (406)
T ss_pred EEEEeeEEECCCcCC-----HHHH--HHHHHcCCCceEeCC--CccccCC--CCceeEE---cCCcChhhc-CCHHHHhh
Confidence 356778888887765 5678 999999999987653 4554444 2334443 557999888 89999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch-------hHHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT-------EANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|++++++++.++++||+|||+++..+++.|+||++|+... .+..+...++..++|+.++..++|.++++|+..
T Consensus 69 ~~~~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 148 (406)
T PRK08439 69 ADRFIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIE 148 (406)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHH
Confidence 9999999999999999999998888888899999996532 223334456677889999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 149 ~gl~G 153 (406)
T PRK08439 149 HGLKG 153 (406)
T ss_pred hCCCC
Confidence 99986
No 13
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=99.65 E-value=8e-16 Score=125.01 Aligned_cols=144 Identities=22% Similarity=0.296 Sum_probs=108.7
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHh
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLAN 92 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~ 92 (172)
....+++|+.+|...+ .+.+ |+.|.+|++.+.... +|+...+ +++.+|. +++|++..| +++++.+
T Consensus 130 rVvITG~G~vtp~G~~-----~~~~--w~~L~~G~s~i~~~~--~f~~~~~--~~~~ag~---i~~f~~~~~-l~~k~~r 194 (540)
T PLN02787 130 RVVVTGMGVVSPLGHD-----PDVF--YNNLLEGVSGISEIE--RFDCSQF--PTRIAGE---IKSFSTDGW-VAPKLSK 194 (540)
T ss_pred CEEEEeeEEECCCCCC-----HHHH--HHHHHcCCCcccccC--ccchhhC--Ccccccc---ccccChhhc-CCHHHHH
Confidence 3445677788877665 6678 999999999887654 4655444 3344554 556888777 8999999
Q ss_pred hcChHHHHHHHHHHHHHHhCCCCCC---CCCCCcceEEEcccchh------HHHHhccCCCCCCccccccchhhHHHhHH
Q psy11963 93 VMDPQLRMLLELTHESIMDGGFNPE---ELRGTRTGVYIGLMTTE------ANDFAEGNPEKLTGYETIGSTRAMLANRL 163 (172)
Q Consensus 93 ~~d~~~~~~l~aa~eAl~dAG~~~~---~~~~~r~gv~vG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 163 (172)
.|||++++++.+++|||+|||++++ .+++.|+||++|+.... +..........++|+.++..+.+..++.|
T Consensus 195 ~md~~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~i 274 (540)
T PLN02787 195 RMDKFMLYLLTAGKKALADGGITEDVMKELDKTKCGVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAML 274 (540)
T ss_pred hCCHHHHHHHHHHHHHHHHcCCCcccccccCCCceEEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHH
Confidence 9999999999999999999999754 45678999999976432 21222234556788888888889999999
Q ss_pred HHHhCCCC
Q psy11963 164 SYAFNFSV 171 (172)
Q Consensus 164 s~~~~l~~ 171 (172)
++.||+++
T Consensus 275 a~~~gl~G 282 (540)
T PLN02787 275 AMDLGWMG 282 (540)
T ss_pred HHHhCCCC
Confidence 99999986
No 14
>KOG1394|consensus
Probab=99.65 E-value=3.2e-16 Score=118.13 Aligned_cols=150 Identities=16% Similarity=0.197 Sum_probs=116.6
Q ss_pred CCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCC
Q psy11963 7 PEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGI 86 (172)
Q Consensus 7 ~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~ 86 (172)
|++-....+..++|+..|...+ ...+ |..|..|+++|..... ++.... +++..| .|+.|+...| +
T Consensus 19 ~~~~~rRVVITGmG~VTplG~~-----v~~~--w~~Ll~GesGI~~l~~--~d~k~~--p~~v~g---~Ip~f~~e~~-~ 83 (440)
T KOG1394|consen 19 PKSRMRRVVITGMGAVTPLGNG-----VHTS--WRNLLSGESGISSLEG--PDYKSI--PFTVAG---KIPRFSVEDY-V 83 (440)
T ss_pred CCCcceeEEEeccceeecCCCC-----hHHH--HHHhhccccCcccccc--cccccC--cchhee---eccccccccc-c
Confidence 4444555677788888887766 4456 8888889998865543 444444 333344 4555888887 9
Q ss_pred CHHHHhhcChHHHHHHHHHHHHHHhCCCCCC---CCCCCcceEEEcccchhHH-------HHhccCCCCCCccccccchh
Q psy11963 87 HSKLANVMDPQLRMLLELTHESIMDGGFNPE---ELRGTRTGVYIGLMTTEAN-------DFAEGNPEKLTGYETIGSTR 156 (172)
Q Consensus 87 ~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~---~~~~~r~gv~vG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 156 (172)
++++.+.|++..++++.++.|||+|||+.+. +.+..++||.||+++.+.. .+...+..+++||.++..+.
T Consensus 84 s~~~~r~ms~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~ 163 (440)
T KOG1394|consen 84 SKGDERRMSKFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILT 163 (440)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhc
Confidence 9999999999999999999999999999654 3467799999998865432 24455688999999999999
Q ss_pred hHHHhHHHHHhCCCC
Q psy11963 157 AMLANRLSYAFNFSV 171 (172)
Q Consensus 157 ~~~a~~is~~~~l~~ 171 (172)
|+.++.||+.|||++
T Consensus 164 NM~ag~vsm~~gl~G 178 (440)
T KOG1394|consen 164 NMAAGYVSMKYGLRG 178 (440)
T ss_pred ccccchhhhhhcCcC
Confidence 999999999999987
No 15
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=99.64 E-value=7.6e-16 Score=123.07 Aligned_cols=147 Identities=17% Similarity=0.138 Sum_probs=109.5
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCC----------CCCCCcccC---CcCCCC
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYG----------APSRTGKIK---DIASFD 80 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~v~~fd 80 (172)
...++|||.+|...+ .+.+ |+.|.+|++.++..+.+++..+.++. +++.+++++ .+.+||
T Consensus 8 VvItG~g~~~p~g~~-----~~~~--w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd 80 (437)
T PLN02836 8 VVVTGLGLVTPLGCG-----VETT--WRRLIAGECGVRALTQDDLKMKSEDEETQLYTLDQLPSRVAALVPRGTGPGDFD 80 (437)
T ss_pred EEEEeeeEECCCCCC-----HHHH--HHHHHcCCCccccCChhhhccccccccccccccccCCccEEEEeccccccccCC
Confidence 356788888887765 5678 99999999999888776654443221 234455553 345788
Q ss_pred ccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCC-CCCCcceEEEcccchh-------HHHHhccCCCCCCccccc
Q psy11963 81 AEFFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEE-LRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETI 152 (172)
Q Consensus 81 ~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~-~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~ 152 (172)
+..|.. .+.+++..++++.++++||+|||+.+.. ....|+||++|++... +..+...+...++|+.++
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~ 156 (437)
T PLN02836 81 EELWLN----SRSSSRFIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVP 156 (437)
T ss_pred hHHhcc----ccccCHHHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhh
Confidence 887733 3568999999999999999999997643 4667999999975322 222334455678899999
Q ss_pred cchhhHHHhHHHHHhCCCC
Q psy11963 153 GSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 153 ~~~~~~~a~~is~~~~l~~ 171 (172)
..++|+++++||+.||+++
T Consensus 157 ~~~~n~~a~~is~~~gl~G 175 (437)
T PLN02836 157 RILINMAAGHVSIRYGFQG 175 (437)
T ss_pred hhcccHHHHHHHHHhCCCC
Confidence 9999999999999999986
No 16
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.63 E-value=1.3e-15 Score=120.58 Aligned_cols=142 Identities=16% Similarity=0.139 Sum_probs=106.7
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCccccc-CCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNF-SGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
..++||+..|...+ .+.+ |+.|.++++.++..+. |+. .++ +++.++.+ .+|++..+ +++++.+.
T Consensus 5 vITG~g~vtp~G~~-----~~~~--~~~L~~g~s~i~~~~~--~~~~~~~--~~~~~~~v---~~~~~~~~-~~~~~~r~ 69 (405)
T PRK09116 5 VVTGMGGVTALGED-----WQTI--AARLKAGRNAVRRMPE--WDRYDGL--NTRLAAPI---DDFELPAH-YTRKKIRS 69 (405)
T ss_pred EEEeeEEECCCCCC-----HHHH--HHHHHcCCCCEEeCCc--hhhccCC--CCceEEEe---cCcChhHh-cCHHHHhh
Confidence 46678888887765 5567 9999999999987653 332 122 34455554 45777665 78999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCC-CCCCCCcceEEEcccchh------H-HHHhccCCCCCCccccccchhhHHHhHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNP-EELRGTRTGVYIGLMTTE------A-NDFAEGNPEKLTGYETIGSTRAMLANRLSY 165 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~-~~~~~~r~gv~vG~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 165 (172)
||+.+++++.+++|||+|||+.. ....+.|+||++|++... + ..+...++..++++.+...++|.++++||+
T Consensus 70 ~~~~~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 149 (405)
T PRK09116 70 MGRVSLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGL 149 (405)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHH
Confidence 99999999999999999999954 335677999999975422 2 223334555678888888899999999999
Q ss_pred HhCCCC
Q psy11963 166 AFNFSV 171 (172)
Q Consensus 166 ~~~l~~ 171 (172)
.|++++
T Consensus 150 ~~~~~G 155 (405)
T PRK09116 150 FFGLKG 155 (405)
T ss_pred HhCCCC
Confidence 999986
No 17
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.63 E-value=1.1e-15 Score=121.09 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=110.6
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVM 94 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~ 94 (172)
..+++||.+|...+ .+.+ |+.+.++++.++..+. ++...+ ....++.+ .+|++. +.+++++++.|
T Consensus 4 ~I~G~g~~~p~g~~-----~~~~--~~~l~~g~~~~~~~~~--~~~~~~--~~~~~~~i---~~~~~~-~~~~~~~~~~~ 68 (406)
T cd00834 4 VITGLGAVTPLGNG-----VEEF--WEALLAGRSGIRPITR--FDASGF--PSRIAGEV---PDFDPE-DYLDRKELRRM 68 (406)
T ss_pred EEECcceeCCCcCC-----HHHH--HHHHHcCCCeeEECCc--ccccCC--CccEEEEc---CCCChh-hcCCHHHhccC
Confidence 46778899988876 5567 8889999988876654 322223 23345554 457766 55999999999
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHHHh
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSYAF 167 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 167 (172)
||++++++.++++||+|||+++..++..++||++|++... +..+...++..++++..+..+.+.++++|+..|
T Consensus 69 ~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~l 148 (406)
T cd00834 69 DRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRL 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHh
Confidence 9999999999999999999998888899999999976543 334445556667888888888899999999999
Q ss_pred CCCC
Q psy11963 168 NFSV 171 (172)
Q Consensus 168 ~l~~ 171 (172)
|+++
T Consensus 149 gl~g 152 (406)
T cd00834 149 GLRG 152 (406)
T ss_pred CCCC
Confidence 9975
No 18
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.63 E-value=1.5e-15 Score=120.72 Aligned_cols=144 Identities=14% Similarity=0.016 Sum_probs=107.5
Q ss_pred CCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHH
Q psy11963 12 GTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLA 91 (172)
Q Consensus 12 ~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~ 91 (172)
.....++||+.+|...+ .+.+ |+.|.+|++.++..+..+++ .....++.++++. .+||+ + ++++++
T Consensus 12 ~~VvItGig~~sp~g~~-----~~~~--w~~L~~G~s~i~~~~~~~~~--~~~~~~~~~g~i~--~~~d~--~-~~~~~~ 77 (418)
T PRK07910 12 PNVVVTGIAMTTALATD-----AETT--WKLLLDGQSGIRTLDDPFVE--EFDLPVRIGGHLL--EEFDH--Q-LTRVEL 77 (418)
T ss_pred CCEEEEeeEEECCCCCC-----HHHH--HHHHHcCCCeeEeCChhhhh--ccCCCcceEEEec--cCccc--c-CCHHHH
Confidence 34566778888877765 5678 99999999998766542222 1111345666663 35765 3 789999
Q ss_pred hhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch-------hHHHHhccCCCCCCccccccchhhHHHhHHH
Q psy11963 92 NVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT-------EANDFAEGNPEKLTGYETIGSTRAMLANRLS 164 (172)
Q Consensus 92 ~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 164 (172)
+.|||++++++.+++|||+|||+. ..++.|+||++|++.. .|..+...++..++++.+...++|.++.+|+
T Consensus 78 ~~~d~~~~~~l~aa~~AledAg~~--~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is 155 (418)
T PRK07910 78 RRMSYLQRMSTVLGRRVWENAGSP--EVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVG 155 (418)
T ss_pred hhccHHHHHHHHHHHHHHHHcCCC--CCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHH
Confidence 999999999999999999999984 3567899999997642 3444445566667888888889999999999
Q ss_pred HHhCCCC
Q psy11963 165 YAFNFSV 171 (172)
Q Consensus 165 ~~~~l~~ 171 (172)
+.|++++
T Consensus 156 ~~~~~~G 162 (418)
T PRK07910 156 LERHAKA 162 (418)
T ss_pred HHhCCCC
Confidence 9999875
No 19
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=99.61 E-value=3.3e-15 Score=118.23 Aligned_cols=141 Identities=16% Similarity=0.267 Sum_probs=108.0
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVM 94 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~ 94 (172)
...+||+..|-..+ .+.+ |+.+.+|+++++... +|+..++ .++..|.+ +|++..+ ++++..+.|
T Consensus 5 vITG~G~vsp~G~~-----~~~~--w~~l~~G~sgi~~~~--~~~~~~~--~~~~~g~~----~~~~~~~-~~~~~~~~~ 68 (406)
T PRK07967 5 VITGLGIVSSIGNN-----QQEV--LASLREGRSGITFSP--EFAEMGM--RSQVWGNV----KLDPTGL-IDRKVMRFM 68 (406)
T ss_pred EEEcceEECCCCCC-----HHHH--HHHHHcCCCceeECC--cccccCC--CCceEEEc----CCChhhc-CCHHHhhcC
Confidence 45567777776655 5567 999999999987544 3444443 33344443 3777776 788889999
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhH-------HHHhc-cCCCCCCccccccchhhHHHhHHHHH
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEA-------NDFAE-GNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
++.+++++.++.|||+|||+....+.+.|+||++|+....+ ..+.. .++..++|+.++..++|.++++||+.
T Consensus 69 ~r~~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~ 148 (406)
T PRK07967 69 GDASAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATP 148 (406)
T ss_pred CHHHHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHH
Confidence 99999999999999999999877778889999999764332 22222 45667889999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
|++++
T Consensus 149 ~~l~G 153 (406)
T PRK07967 149 FKIKG 153 (406)
T ss_pred HCCCC
Confidence 99986
No 20
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.52 E-value=5.2e-14 Score=111.78 Aligned_cols=142 Identities=11% Similarity=0.061 Sum_probs=102.0
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccC--CC----CCCCCCCcccCCcCCCCccccCCCH
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFS--GL----YGAPSRTGKIKDIASFDAEFFGIHS 88 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~--~~----~~~~~~~~~~~~v~~fd~~~~~~~~ 88 (172)
..++||+.+|...+ .+.+ |+.|.++++.++..+. ++.. .. ...+..++.+ .+|++..+ +++
T Consensus 5 vItG~g~vsp~g~~-----~~~~--w~~l~~g~s~i~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~ 71 (410)
T PRK07103 5 VVTGVGVVSAIGQG-----RPSF--AAALLAGRHAFGVMRR--PGRQVPDDAGAGLASAFIGAEL---DSLALPER-LDA 71 (410)
T ss_pred EEEcceEECCCcCC-----HHHH--HHHHHcCCCeEecCCc--ccccccccccccCCCceEEEEe---CCCChhhc-CCH
Confidence 46778888888776 5567 9999999999986654 2211 00 0012334444 34665555 788
Q ss_pred HHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh------HHHHhccCCCCCCccccccchhhHHHhH
Q psy11963 89 KLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE------ANDFAEGNPEKLTGYETIGSTRAMLANR 162 (172)
Q Consensus 89 ~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 162 (172)
+..+.|++.+++++.+++|||+|||+. ..++.|+||++|++... +......++..+.|+.....+++.++++
T Consensus 72 ~~~r~~~~~~~lal~Aa~eAl~dAgl~--~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ 149 (410)
T PRK07103 72 KLLRRASLSAQAALAAAREAWRDAALG--PVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGL 149 (410)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHhcCcC--CCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHH
Confidence 889999999999999999999999994 45677999999966421 1111223455667777778888999999
Q ss_pred HHHHhCCCC
Q psy11963 163 LSYAFNFSV 171 (172)
Q Consensus 163 is~~~~l~~ 171 (172)
|++.||+++
T Consensus 150 ia~~lgl~G 158 (410)
T PRK07103 150 CSEQFGIRG 158 (410)
T ss_pred HHHHhCCCC
Confidence 999999976
No 21
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.52 E-value=8.6e-14 Score=109.80 Aligned_cols=140 Identities=14% Similarity=0.077 Sum_probs=96.9
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHH-HH
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSK-LA 91 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~-~~ 91 (172)
.....+||+..|-..+ .+.+ |+.+.+|+++ .... ..++... ....+.+ ++...+ +.++ ..
T Consensus 7 rVvITGiG~vsp~G~~-----~e~~--w~aL~~G~sg-~~~~--~~~~~~~-----~~~~~~~---~~~~~~-~~~~~~~ 67 (398)
T PRK06519 7 DVVITGIGLVSSLGEG-----LDAH--WNALSAGRPQ-PNVD--TETFAPY-----PVHPLPE---IDWSQQ-IPKRGDQ 67 (398)
T ss_pred CEEEEcceEECCCCCC-----HHHH--HHHHHcCCCC-CCCC--cccccCc-----Ccccccc---cChhhc-CCchhhh
Confidence 3456677887777665 5567 8899888886 1111 1111111 1112222 233333 5555 77
Q ss_pred hhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------------------HHHHhccCCCCCCccccc
Q psy11963 92 NVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------------------ANDFAEGNPEKLTGYETI 152 (172)
Q Consensus 92 ~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------------------~~~~~~~~~~~~~~~~~~ 152 (172)
+.||+.+++++.++.+||+|||+.....+..|+||++|++... +..+...++..++|+.++
T Consensus 68 r~~~r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 147 (398)
T PRK06519 68 RQMETWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFL 147 (398)
T ss_pred hccCHHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhh
Confidence 8899999999999999999999976555667999999976432 112233456678999999
Q ss_pred cchhhHHHhHHHHHhCCCC
Q psy11963 153 GSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 153 ~~~~~~~a~~is~~~~l~~ 171 (172)
..++|.++++||+.||+++
T Consensus 148 ~~~~n~~a~~is~~~gl~G 166 (398)
T PRK06519 148 AQLSNLLAGNISIVHKVTG 166 (398)
T ss_pred hhhhhHHHHHHHHHhCCCC
Confidence 9999999999999999986
No 22
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=99.50 E-value=4.8e-14 Score=112.34 Aligned_cols=133 Identities=13% Similarity=0.134 Sum_probs=99.4
Q ss_pred CCcccccccccccccccccccccCcccccCCCCC------------CCCCCcccCCcCCCCccccCCCHHHHhhcChHHH
Q psy11963 32 GNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYG------------APSRTGKIKDIASFDAEFFGIHSKLANVMDPQLR 99 (172)
Q Consensus 32 ~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~------------~~~~~~~~~~v~~fd~~~~~~~~~~~~~~d~~~~ 99 (172)
.+.+.+ |+.|.+|++.++..+..+++....+. ++..++.++. .+||+..|...+ ..+++++
T Consensus 7 ~~~~~~--w~~L~~G~s~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~-~~f~~~~~~~~~----~~~~~~~ 79 (421)
T PTZ00050 7 VGAEST--WEALIAGKSGIRKLTEFPKFLPDCIPEQKALENLVAAMPCQIAAEVDQ-SEFDPSDFAPTK----RESRATH 79 (421)
T ss_pred CCHHHH--HHHHHcCCCeeecCCchhhcccccccccccccccccCCCCceEEECCc-ccCChhHcCCcc----cCCHHHH
Confidence 345678 99999999999877765433322110 2345565543 268888774433 3599999
Q ss_pred HHHHHHHHHHHhCCCC-CCCCCCCcceEEEcccchhH-------HHHhccCCCCCCccccccchhhHHHhHHHHHhCCCC
Q psy11963 100 MLLELTHESIMDGGFN-PEELRGTRTGVYIGLMTTEA-------NDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 100 ~~l~aa~eAl~dAG~~-~~~~~~~r~gv~vG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~~ 171 (172)
+++.++++||+|||+. +..++..++||++|++...+ ..+...+...++++.++..+.|.++++||+.|||++
T Consensus 80 l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~l~G 159 (421)
T PTZ00050 80 FAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKG 159 (421)
T ss_pred HHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhCCCC
Confidence 9999999999999998 67778889999999765332 333445666788999999999999999999999986
No 23
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.49 E-value=9.9e-14 Score=110.10 Aligned_cols=140 Identities=16% Similarity=0.144 Sum_probs=100.4
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVM 94 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~ 94 (172)
..+++|+.+|...+. ...+.+ |+.+.++++.++..+.++ ..+ ++..+|.++ +|+ +++++++.+
T Consensus 4 ~ItG~g~v~p~g~~~--~~~~~~--w~~l~~g~s~i~~~~~~~---~~~--~~~~~g~i~---~~~-----~~~~~~~~~ 66 (407)
T cd00828 4 VITGIGVVSPHGEGC--DEVEEF--WEALREGRSGIAPVARLK---SRF--DRGVAGQIP---TGD-----IPGWDAKRT 66 (407)
T ss_pred EEECceeecCCCCCC--CCHHHH--HHHHHcCCCceeeCCccc---ccC--CccEEEEcc---CCC-----cCHHHHHhc
Confidence 356778888866652 335677 999999999998766432 112 233455443 344 677888888
Q ss_pred ---ChHHHHHHHHHHHHHHhCCCCCCC-CCCCcceEEEcccchhHHHHhc---cCCCCCCccccccchh--hHHHhHHHH
Q psy11963 95 ---DPQLRMLLELTHESIMDGGFNPEE-LRGTRTGVYIGLMTTEANDFAE---GNPEKLTGYETIGSTR--AMLANRLSY 165 (172)
Q Consensus 95 ---d~~~~~~l~aa~eAl~dAG~~~~~-~~~~r~gv~vG~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~a~~is~ 165 (172)
||+++++++++++||+|||+.++. ++..++||++|++...+..... .......++..+..+. +.++++|++
T Consensus 67 ~~~~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 146 (407)
T cd00828 67 GIVDRTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNI 146 (407)
T ss_pred cCCCHHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHH
Confidence 999999999999999999998877 7888999999976543322111 1112345677777777 999999999
Q ss_pred HhCC-CC
Q psy11963 166 AFNF-SV 171 (172)
Q Consensus 166 ~~~l-~~ 171 (172)
.|++ ++
T Consensus 147 ~~gl~~G 153 (407)
T cd00828 147 LLLSSHG 153 (407)
T ss_pred HhCcCCC
Confidence 9999 65
No 24
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.41 E-value=1.2e-12 Score=103.13 Aligned_cols=140 Identities=16% Similarity=0.189 Sum_probs=101.4
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhc
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVM 94 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~ 94 (172)
+..++|+..+-..+ .+.+ |+.+..+++++.... .|+..++ ...+..++.+| ..+ +.+++.++|
T Consensus 6 viTG~g~vs~lG~~-----~~~~--~~~l~~g~sgi~~~~--~~~~~~~-----~~~~~~~i~~~--~~~-~~~~~~~~~ 68 (412)
T COG0304 6 VITGLGIVSSLGNG-----VEEV--WAALLAGKSGIRPIT--RFDASGL-----GVKIAGEIKDL--DDQ-IAKKERRFM 68 (412)
T ss_pred EEecceeeecccCC-----HHHH--HHHHhcCCCCCCccc--cccccCC-----CCccccccccc--ccc-cchHHhhcc
Confidence 34456666665554 4456 999999999775444 4666666 22223455555 233 678888899
Q ss_pred ChHHHHHHHHHHHHHHhCCCCC-CCCCCCcceEEEcccchh-------HHHHhccCCCC-CCccccccchhhHHHhHHHH
Q psy11963 95 DPQLRMLLELTHESIMDGGFNP-EELRGTRTGVYIGLMTTE-------ANDFAEGNPEK-LTGYETIGSTRAMLANRLSY 165 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~-~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~a~~is~ 165 (172)
|+.+++++.++.|||+|||+.. ....+ |+||++|++... +..+...+..+ ++|+.++..+++++++.|+.
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~-r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~ 147 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDM-RVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAI 147 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCc-cEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHH
Confidence 9999999999999999999972 22233 999999976432 23344455555 89999999999999999999
Q ss_pred HhCCCCC
Q psy11963 166 AFNFSVF 172 (172)
Q Consensus 166 ~~~l~~~ 172 (172)
.||+++.
T Consensus 148 ~~g~~G~ 154 (412)
T COG0304 148 VFGLKGP 154 (412)
T ss_pred HhCCCCC
Confidence 9999873
No 25
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.94 E-value=3e-09 Score=82.65 Aligned_cols=75 Identities=17% Similarity=0.156 Sum_probs=63.0
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|++.+++++.+++|||+|||+. .++.|+||++|++... |..+...++..++|+.++..++|.++++||+.
T Consensus 1 ~~~~~~~~~~a~~~a~~~a~~~---~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~ 77 (342)
T PRK14691 1 MGRWWRYKWITFHPSLTHADNT---EKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIK 77 (342)
T ss_pred CCHHHHHHHHHHHHHHHhCCCC---CCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHH
Confidence 5788999999999999999986 4567999999976432 33344566778899999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
|||++
T Consensus 78 ~~l~G 82 (342)
T PRK14691 78 HHFKG 82 (342)
T ss_pred hCCCC
Confidence 99986
No 26
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.90 E-value=6.2e-09 Score=83.27 Aligned_cols=137 Identities=11% Similarity=0.069 Sum_probs=87.7
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++|+..+...+ .+.+ |+.|.+|++.++... +|+.... .++.+|.++ |++... ...
T Consensus 13 VvITG~G~vs~~G~~-----~~~~--~~~L~~G~s~i~~~~--~~~~~~~--~~~~~g~~~----~~~~~~------~~~ 71 (425)
T PRK06501 13 VAVTGMGVVTSLGQG-----KADN--WAALTAGESGIHTIT--RFPTEGL--RTRIAGTVD----FLPESP------FGA 71 (425)
T ss_pred EEEEeeeEECCCCCC-----HHHH--HHHHHcCCCceEcCC--cccccCC--CCceEEEEe----eccccc------ccc
Confidence 455677787776655 5667 999999999987553 4544443 334455442 222221 223
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCC--------------CCCcceEEEcccc---hhHHHHhccCCCCCCccccccchh
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEEL--------------RGTRTGVYIGLMT---TEANDFAEGNPEKLTGYETIGSTR 156 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~--------------~~~r~gv~vG~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 156 (172)
+++.+++++.+++|||+|||+..... .+.|++++.+... ..|..+.........+........
T Consensus 72 ~~~~~~~~~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (425)
T PRK06501 72 SALSEALARLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQF 151 (425)
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcc
Confidence 66788999999999999999953221 2457888887553 234444443333333334455566
Q ss_pred hHHHhHHHHHhCCCC
Q psy11963 157 AMLANRLSYAFNFSV 171 (172)
Q Consensus 157 ~~~a~~is~~~~l~~ 171 (172)
+.++++|+..|++++
T Consensus 152 ~~~a~~i~~~~gl~G 166 (425)
T PRK06501 152 GSIADRLADRFGTRG 166 (425)
T ss_pred cHHHHHHHHHhCCCC
Confidence 788999999999986
No 27
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.83 E-value=2.1e-08 Score=79.43 Aligned_cols=136 Identities=14% Similarity=0.109 Sum_probs=87.1
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccc-cccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTR-AMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
..+++|+..|-..+ .+.+ |+++.+|+ ++++.... ++.. + +.+.|. +.+|+. .+ ++++..+.
T Consensus 5 vITG~G~vsp~G~~-----~~~~--~~~l~~G~~sgi~~~~~--~~~~-~---~~~~g~---~~~~~~-~~-~~~~~~~~ 66 (392)
T PRK09185 5 YISAFGATSALGRG-----LDAI--LAALRAGRASGMRPCDF--WLVD-L---PTWVGE---VVGVEL-PA-LPAALAAF 66 (392)
T ss_pred EEEeeEEECCCcCC-----HHHH--HHHHHcCCCCCeEeCcc--cccc-C---CeEEEE---ecCccc-cc-CCHHHHhc
Confidence 55677888886665 5667 99999999 88875542 3211 1 112232 334552 23 67777888
Q ss_pred cChHHHHHHHHHHH---HHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHH
Q psy11963 94 MDPQLRMLLELTHE---SIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRL 163 (172)
Q Consensus 94 ~d~~~~~~l~aa~e---Al~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 163 (172)
+++..++++.++.+ |+.|++ ...+..|+||++|++... |..+.........++.++..+.+.++++|
T Consensus 67 ~~~~~~~~~~a~~~~~~a~~~~~---~~~~~~r~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 143 (392)
T PRK09185 67 DCRNNRLALLALQQIEPAVEAAI---ARYGADRIGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFL 143 (392)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhc---ccCCCCcEEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHH
Confidence 89988888877766 555555 234567999999976422 22211111112245556677888999999
Q ss_pred HHHhCCCC
Q psy11963 164 SYAFNFSV 171 (172)
Q Consensus 164 s~~~~l~~ 171 (172)
++.||+++
T Consensus 144 a~~lgl~G 151 (392)
T PRK09185 144 RAYLGLSG 151 (392)
T ss_pred HHHhCCCC
Confidence 99999975
No 28
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.66 E-value=1e-07 Score=75.24 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=76.2
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccc-cCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFN-FSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...++|+..|-.. .+.+ |+.|.+|+++++.... |+ .... ..+.+. ++ + ..
T Consensus 5 vITG~G~vsp~G~------~~~~--~~~l~~G~sgi~~~~~--~~~~~~~-----~~~~~~----~~-------~---~~ 55 (381)
T PRK05952 5 VVTGIGLVSALGD------LEQS--WQRLLQGKSGIKLHQP--FPELPPL-----PLGLIG----NQ-------P---SS 55 (381)
T ss_pred EEEeeEEECcccC------HHHH--HHHHHcCCCCeEeCCc--ccccccc-----cceeec----cc-------c---cc
Confidence 4456677666543 3457 9999999998875442 32 1111 111110 01 1 11
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh---HHH----HhccCC---CCCCccccccchhhHHHhHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE---AND----FAEGNP---EKLTGYETIGSTRAMLANRL 163 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~---~~~----~~~~~~---~~~~~~~~~~~~~~~~a~~i 163 (172)
+ .+++..++.|||+|||++.. ..|+||++|++... +.. ....+. ..++|..+...++|.++++|
T Consensus 56 ~---~~~~~~a~~~Al~dagl~~~---~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~i 129 (381)
T PRK05952 56 L---EDLTKTVVTAALKDAGLTPP---LTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAA 129 (381)
T ss_pred c---cHHHHHHHHHHHHhcCCCCC---CCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHH
Confidence 2 23556899999999999653 36999999976432 221 111121 24567777788999999999
Q ss_pred HHHhCCCC
Q psy11963 164 SYAFNFSV 171 (172)
Q Consensus 164 s~~~~l~~ 171 (172)
++.|++++
T Consensus 130 a~~~~~~G 137 (381)
T PRK05952 130 ARQIGTQG 137 (381)
T ss_pred HHHhCCCC
Confidence 99999986
No 29
>KOG1202|consensus
Probab=98.59 E-value=5.5e-08 Score=83.86 Aligned_cols=62 Identities=45% Similarity=0.932 Sum_probs=60.3
Q ss_pred CCCCCCCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCC
Q psy11963 2 DGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGL 63 (172)
Q Consensus 2 ~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~ 63 (172)
||||+|..||||+||||+||+++.-...+..++..+.|+...+..|++.++|.++.||+.|.
T Consensus 101 DaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGP 162 (2376)
T KOG1202|consen 101 DAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGP 162 (2376)
T ss_pred hCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCC
Confidence 89999999999999999999999999999999999999999999999999999999999998
No 30
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=97.86 E-value=7.1e-05 Score=57.81 Aligned_cols=75 Identities=13% Similarity=0.146 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHH--HHhccCCCCCCccccccchhhHHHhHHHHHhCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEAN--DFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~~ 171 (172)
+++++++++++||++||++.+.......+|++|+....+. ...........|+.+.+.+.+.++++|+..+++++
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g 87 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIHG 87 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCCC
Confidence 6889999999999999998665566788999997755442 33334455678888888888999999999999965
No 31
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.59 E-value=2.5e-05 Score=69.01 Aligned_cols=63 Identities=30% Similarity=0.524 Sum_probs=54.8
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCC
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGL 63 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~ 63 (172)
|||||.+++++|+.||||+|.+..+|..+.....+..+.+...++..+.++.|.+|.|+++|.
T Consensus 104 EdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l~GP 166 (1061)
T COG3321 104 EDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGP 166 (1061)
T ss_pred HHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcCCCC
Confidence 799999999999999999999999999976443335556888888889999999999999987
No 32
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=96.59 E-value=0.013 Score=42.88 Aligned_cols=76 Identities=17% Similarity=0.105 Sum_probs=57.2
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHH-------HHhccCCCCCCccccccchhhH
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEAN-------DFAEGNPEKLTGYETIGSTRAM 158 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 158 (172)
|++.+.|+|++..|++++++.+++++.. ..+ .++.++..++.. .+.. ...++|..+..+..|.
T Consensus 23 lp~m~rRRls~~~rla~~~a~~~~~~~~----~~d----~~VfaS~~Gel~~t~~ll~~l~~--~~~lSPT~Fs~SVHNA 92 (218)
T PF13723_consen 23 LPPMQRRRLSRLSRLALEAALECLAEDE----QPD----AIVFASRHGELERTFKLLEALAE--EEELSPTAFSQSVHNA 92 (218)
T ss_pred CCHHHHcccCHHHHHHHHHHHHHHhccC----CCC----cEEEEeCCCcHHHHHHHHHHHHh--CCCcCccchhhhhhhH
Confidence 8999999999999999999999986421 111 566665544322 2332 3458999999999999
Q ss_pred HHhHHHHHhCCCC
Q psy11963 159 LANRLSYAFNFSV 171 (172)
Q Consensus 159 ~a~~is~~~~l~~ 171 (172)
+++.+++..+.+.
T Consensus 93 ~aG~~sI~~~~~~ 105 (218)
T PF13723_consen 93 AAGYWSIATKNTG 105 (218)
T ss_pred HHHHHHHHhCCCC
Confidence 9999999887653
No 33
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=93.15 E-value=0.27 Score=36.28 Aligned_cols=34 Identities=21% Similarity=0.336 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE 134 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~ 134 (172)
++.++.+++++||+++|++++ +..+|++|+...+
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~----~i~~li~~~~~~~ 40 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKG----PIVGVIVGTTGGS 40 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCC----CceEEEEEECCCC
Confidence 578899999999999999754 3567888866443
No 34
>PRK08256 lipid-transfer protein; Provisional
Probab=90.34 E-value=0.88 Score=36.29 Aligned_cols=36 Identities=17% Similarity=0.211 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
....++.+++++||+|||+++++++...+|+..+..
T Consensus 21 ~~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~ 56 (391)
T PRK08256 21 DYPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDS 56 (391)
T ss_pred CHHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCc
Confidence 457889999999999999988777766677666543
No 35
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=87.39 E-value=0.93 Score=35.27 Aligned_cols=34 Identities=15% Similarity=0.404 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE 134 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~ 134 (172)
..-++..||++||++||+.+++++- |++.+...+
T Consensus 52 ~s~la~~Aa~~AL~~Agi~~~dIDl----II~aT~tpd 85 (323)
T COG0332 52 TSDLAVEAARKALEDAGISPDDIDL----IIVATSTPD 85 (323)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEcCCcc
Confidence 5678899999999999998776542 455544433
No 36
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=86.62 E-value=0.2 Score=40.23 Aligned_cols=31 Identities=42% Similarity=0.892 Sum_probs=26.3
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAE 31 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~ 31 (172)
+|||++++.+++.+++|++|+...++.....
T Consensus 100 ~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~ 130 (424)
T smart00825 100 EDAGIDPESLRGSRTGVFVGAMSSDYAELLA 130 (424)
T ss_pred HHcCCChhHcCCCCCEEEEEEcHHHHHHHHh
Confidence 5899999999999999999998887765443
No 37
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=86.00 E-value=0.47 Score=38.20 Aligned_cols=27 Identities=30% Similarity=0.305 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~ 27 (172)
+|||++++.....++||++|.+..++.
T Consensus 87 ~dAGl~~~~~~~~r~Gv~vGt~~g~~~ 113 (414)
T PRK08722 87 DDSGLEVTEENAHRIGVAIGSGIGGLG 113 (414)
T ss_pred HHcCCCccccCCCCEEEEEeeCCCcch
Confidence 589999888899999999998766554
No 38
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=84.47 E-value=0.5 Score=46.29 Aligned_cols=25 Identities=16% Similarity=0.329 Sum_probs=20.6
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||+.++ +.+++|||++|+...++
T Consensus 106 edAG~~~~-~~~~r~GV~~G~~~~~~ 130 (2582)
T TIGR02813 106 NDAGLPDG-YDRDKIGITLGVGGGQK 130 (2582)
T ss_pred HhCCCCCC-CCCCCEEEEEEECCCcc
Confidence 69999754 89999999999876543
No 39
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=83.00 E-value=0.47 Score=37.95 Aligned_cols=26 Identities=23% Similarity=0.285 Sum_probs=22.5
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||++++++.+.++||++|.....+
T Consensus 84 ~dAGl~~~~~~~~r~Gv~~Gt~~g~~ 109 (399)
T cd00832 84 ADAGVDPAALPPYDMGVVTASAAGGF 109 (399)
T ss_pred HHcCCCccccCCCceEEEEccCCccH
Confidence 58999999999999999999766554
No 40
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=82.51 E-value=0.42 Score=38.17 Aligned_cols=31 Identities=35% Similarity=0.775 Sum_probs=26.0
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAE 31 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~ 31 (172)
+|||++++.+...+++|++|....++.....
T Consensus 100 ~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~ 130 (421)
T cd00833 100 EDAGYSPESLAGSRTGVFVGASSSDYLELLA 130 (421)
T ss_pred HHcCCCchhcCCCCceEEeCcCHHHHHHHHh
Confidence 5899999999999999999988887765443
No 41
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=79.23 E-value=1.1 Score=35.98 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=22.0
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
+|||+.++.+.+.++||++|......
T Consensus 84 ~dAGl~~~~~~~~rvGv~~gs~~~~~ 109 (406)
T PRK07967 84 ADAGLSEEQVSNPRTGLIAGSGGGST 109 (406)
T ss_pred HHcCCCCccCCCCCEEEEEecCCccH
Confidence 58999999999999999999765544
No 42
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=76.89 E-value=4.3 Score=31.41 Aligned_cols=24 Identities=13% Similarity=0.199 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...++.+|+++||++||+++++++
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~dId 75 (329)
T PRK07204 52 SSYMGAEAAKKAVEDAKLTLDDID 75 (329)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 467899999999999999876554
No 43
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=76.86 E-value=4.5 Score=32.39 Aligned_cols=31 Identities=13% Similarity=0.260 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+.+++++||+++|+++++++. |++|..
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~----vi~G~~ 57 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVED----VIMGCA 57 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCc----EEEEEe
Confidence 4678899999999999998877764 666643
No 44
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=76.23 E-value=2.6 Score=33.76 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+.+++++||+|||+++++++ +|++|+.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID----~vi~g~~ 56 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIE----VVHVGNF 56 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 367889999999999999887776 4666643
No 45
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=73.77 E-value=3.5 Score=32.82 Aligned_cols=31 Identities=23% Similarity=0.484 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...++.+++++||+|||+++++++ +|++|..
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id----~vi~g~~ 52 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDID----AMYVGNM 52 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 467789999999999999876665 4566543
No 46
>PRK05790 putative acyltransferase; Provisional
Probab=72.56 E-value=3.7 Score=32.77 Aligned_cols=24 Identities=13% Similarity=0.288 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...|+.+|+++||+|||+++++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID 49 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVD 49 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 367889999999999999887766
No 47
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=72.41 E-value=9.4 Score=29.27 Aligned_cols=32 Identities=13% Similarity=0.322 Sum_probs=24.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
....++.+|+++||+++|+++++++ .|++|+.
T Consensus 51 ~~~~la~~A~~~al~~agl~~~~id----~vi~~~~ 82 (319)
T PRK09352 51 TTSDLATEAAKKALEAAGIDPEDID----LIIVATT 82 (319)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcC
Confidence 3578899999999999999776554 4666654
No 48
>PRK07937 lipid-transfer protein; Provisional
Probab=71.96 E-value=4.3 Score=32.02 Aligned_cols=23 Identities=17% Similarity=0.275 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..++.+|+.+||+|||+++++++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID 47 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIG 47 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 57899999999999999887776
No 49
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=71.77 E-value=4.4 Score=32.26 Aligned_cols=30 Identities=20% Similarity=0.323 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
...|+.+++++||+|||+++++++ +|++|+
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID----~vi~g~ 50 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIE----LVVVGS 50 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEe
Confidence 357889999999999999877665 455664
No 50
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=68.57 E-value=5.6 Score=31.72 Aligned_cols=30 Identities=13% Similarity=0.525 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
...|+.+++++||+|||+++++++ +|++|+
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId----~vi~g~ 51 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVD----GIFLGH 51 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEE
Confidence 357889999999999999876655 566664
No 51
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=68.10 E-value=5.6 Score=31.68 Aligned_cols=30 Identities=20% Similarity=0.328 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
...|+.+|+++||+|||+++++++ +|++|+
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID----~vi~~~ 51 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVD----DVIMGN 51 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEe
Confidence 367889999999999999877665 355553
No 52
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=67.94 E-value=4.8 Score=32.27 Aligned_cols=29 Identities=17% Similarity=0.349 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..|+.+|+++||+|||+++.+++ ++++++
T Consensus 30 ~~L~~~A~~~Al~dagl~~~dID----~~i~~~ 58 (392)
T PRK06065 30 QELAWEAASKALDEAGLELKDID----CVVIGS 58 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEec
Confidence 56889999999999999877665 455553
No 53
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=66.51 E-value=6.5 Score=31.51 Aligned_cols=29 Identities=21% Similarity=0.554 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..++.+++++||+|||+++++++. |++|.
T Consensus 28 ~~L~~ea~~~AL~dagl~~~dID~----v~vg~ 56 (398)
T PRK06157 28 EDLMVEAFLEALADAGIEPKDIDA----AWFGT 56 (398)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEEe
Confidence 678899999999999998776653 55554
No 54
>PLN03170 chalcone synthase; Provisional
Probab=66.46 E-value=5.6 Score=32.00 Aligned_cols=34 Identities=9% Similarity=0.100 Sum_probs=26.2
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
+..+......-...|+.+|+++||++||++++++
T Consensus 95 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dI 128 (401)
T PLN03170 95 LDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKI 128 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 4555555566677899999999999999976654
No 55
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=65.84 E-value=3.1 Score=33.78 Aligned_cols=26 Identities=35% Similarity=0.334 Sum_probs=20.2
Q ss_pred CCCCCCCCC-CCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEE-LRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~-~~~~~~~V~vg~~~~~~ 26 (172)
||||+.+.+ .++.++||++|......
T Consensus 106 ~dAg~~~~~~~~~~~~Gv~~Gt~~g~~ 132 (437)
T PLN02836 106 SDARWLPSEDEAKERTGVSIGGGIGSI 132 (437)
T ss_pred HHcCCCcccccCCcCEEEEEeeccCcH
Confidence 589998765 57889999999765444
No 56
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=65.67 E-value=6.8 Score=31.30 Aligned_cols=23 Identities=13% Similarity=0.124 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.++..+||+|||+++++++
T Consensus 27 ~~L~~~a~~~al~dagi~~~dID 49 (388)
T PRK06366 27 PQLGGAAIKAVIDDAKLDPALVQ 49 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 56888999999999999887766
No 57
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=64.68 E-value=7.4 Score=30.97 Aligned_cols=23 Identities=9% Similarity=0.174 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..++.+++.+||+|||++++.++
T Consensus 27 ~~L~~~a~~~al~dagl~~~~ID 49 (382)
T PRK07801 27 ADLGAHVLKGLVDRTGIDPAAVD 49 (382)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC
Confidence 56788999999999999877665
No 58
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=64.21 E-value=6.4 Score=30.22 Aligned_cols=31 Identities=13% Similarity=0.271 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...++.+|+++||+++|+++++++ .|++++.
T Consensus 51 ~~~la~~A~~~al~~agl~~~~Id----~~i~~~~ 81 (318)
T TIGR00747 51 SSTMGFEAAKRAIENAGISKDDID----LIIVATT 81 (318)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC
Confidence 467889999999999999776543 4555543
No 59
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=64.07 E-value=7.5 Score=31.14 Aligned_cols=28 Identities=14% Similarity=0.317 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
..++.+++++||+|||++++.++ +|++|
T Consensus 26 ~~L~~~a~~~al~dAgl~~~~ID----~vv~g 53 (394)
T PLN02644 26 TELGSIAIQAALERAGVDPALVQ----EVFFG 53 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEE
Confidence 56788999999999999877665 35554
No 60
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=63.69 E-value=7.5 Score=30.75 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=24.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
....++.+|+++||++||+++++++ .|++++.
T Consensus 94 ~~~~la~~Aa~~aL~~agl~~~~Id----~li~~~~ 125 (372)
T PRK07515 94 IQAEMGVAAARQALARAGRTAEDID----AVIVACS 125 (372)
T ss_pred hHHHHHHHHHHHHHHHcCCCHHHCC----EEEEECC
Confidence 3457999999999999999876654 3666644
No 61
>PRK08304 stage V sporulation protein AD; Validated
Probab=63.53 E-value=5.7 Score=31.08 Aligned_cols=24 Identities=4% Similarity=0.310 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...|+.+|+.+||++||+++++++
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID 79 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDID 79 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 357889999999999999876554
No 62
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=63.32 E-value=4.9 Score=32.16 Aligned_cols=24 Identities=33% Similarity=0.394 Sum_probs=21.1
Q ss_pred CCCCCCCCCCCCCcceEEEeeecC
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTT 24 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~ 24 (172)
+|||++++.+++.++||++|....
T Consensus 85 ~dAGl~~~~~~~~~~gv~~g~~~~ 108 (411)
T PRK07314 85 EDAGLEITEENADRIGVIIGSGIG 108 (411)
T ss_pred HHcCCCcccCCcccEEEEEecCcC
Confidence 589999999999999999997543
No 63
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=63.30 E-value=7.9 Score=30.99 Aligned_cols=29 Identities=14% Similarity=0.362 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..|+.+++++||+|||+++++++ .|++|+
T Consensus 27 ~~La~~A~~~AL~~agl~~~dID----~vi~g~ 55 (393)
T PRK05656 27 VELGAAVIRRLLEQTGLDPAQVD----EVILGQ 55 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEE
Confidence 56788999999999999877665 455553
No 64
>PLN03172 chalcone synthase family protein; Provisional
Probab=63.16 E-value=6.5 Score=31.53 Aligned_cols=34 Identities=12% Similarity=0.122 Sum_probs=26.5
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
+..+......-...|+.+|+++||++||++++++
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dI 124 (393)
T PLN03172 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKI 124 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 4555556666677899999999999999976554
No 65
>PRK07855 lipid-transfer protein; Provisional
Probab=62.19 E-value=5 Score=32.07 Aligned_cols=23 Identities=26% Similarity=0.518 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.+|+++||+|||++.++++
T Consensus 25 ~~L~~eA~~~Al~DAgl~~~dID 47 (386)
T PRK07855 25 LRLACEAVLAALDDAGLAPSDVD 47 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 56889999999999999776665
No 66
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=61.97 E-value=6.5 Score=31.58 Aligned_cols=29 Identities=14% Similarity=0.305 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..|+.+++++||+|||+++++++ .|++|.
T Consensus 27 ~eLa~~A~~~AL~~agl~~~dID----~vv~g~ 55 (404)
T PRK06205 27 EELAATVIRALVERTGIDPARID----DVIFGQ 55 (404)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEe
Confidence 56778899999999999877665 455553
No 67
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=61.93 E-value=4.7 Score=32.35 Aligned_cols=26 Identities=38% Similarity=0.428 Sum_probs=21.7
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
+|||+.++.+.+.++||++|......
T Consensus 85 ~dAGl~~~~~~~~r~Gv~~g~~~~~~ 110 (406)
T PRK08439 85 KDAGFLPEELDAERFGVSSASGIGGL 110 (406)
T ss_pred HHcCCCcccCCCCCEEEEEecCCccH
Confidence 58999999999999999999655443
No 68
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=60.46 E-value=6.9 Score=30.69 Aligned_cols=31 Identities=16% Similarity=0.414 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+.+|+++||++||+++++++ .+++++.
T Consensus 50 ~~~la~~Aa~~aL~~agl~~~dID----~li~~s~ 80 (345)
T TIGR00748 50 TATIGVEAARNALKRAKIDPKDIG----AVYVGSE 80 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 467899999999999999876655 3555543
No 69
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=60.12 E-value=7.2 Score=30.42 Aligned_cols=23 Identities=0% Similarity=0.237 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.+|+++||++||+++++++
T Consensus 51 ~eLa~eAa~~ALekAGL~~~DID 73 (327)
T TIGR02845 51 RKLMEDAVNLALKKANLKKDDVD 73 (327)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 56889999999999999876554
No 70
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=58.93 E-value=6.2 Score=31.53 Aligned_cols=29 Identities=17% Similarity=0.387 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..++.+|+++||+|||+++++++ ++++++
T Consensus 25 ~eL~~eAa~~Al~dAgl~~~dID----~iv~~~ 53 (386)
T PRK08313 25 AGLVREAIDRALADAGLTWDDID----AVVVGK 53 (386)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEec
Confidence 56889999999999999877665 455553
No 71
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=58.91 E-value=6.2 Score=31.60 Aligned_cols=24 Identities=17% Similarity=0.448 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..++.+|+.+||+|||+++.+++.
T Consensus 26 ~~L~~eA~~~Al~DAgl~~~dID~ 49 (388)
T PRK08142 26 AQLHAEVAKGALADAGLSLADVDG 49 (388)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE
Confidence 578899999999999997766653
No 72
>PRK06158 thiolase; Provisional
Probab=57.53 E-value=6.7 Score=31.28 Aligned_cols=29 Identities=17% Similarity=0.540 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..|+.+|+++||+|||+++++++ +++++.
T Consensus 29 ~eL~~eA~~~Al~dAgl~~~dID----~iv~~~ 57 (384)
T PRK06158 29 MELLAQAAHRALADAGLTMADVD----GLFTAS 57 (384)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEec
Confidence 57889999999999999876665 445553
No 73
>PLN03173 chalcone synthase; Provisional
Probab=57.37 E-value=8 Score=31.01 Aligned_cols=35 Identities=11% Similarity=0.116 Sum_probs=26.3
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
+..+......-...|+.+|+++||+++|+++++++
T Consensus 91 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId 125 (391)
T PLN03173 91 LDARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKIT 125 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 44455555566678999999999999999776543
No 74
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=56.98 E-value=9.6 Score=30.50 Aligned_cols=23 Identities=26% Similarity=0.556 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCC-CCC-CCCC
Q psy11963 98 LRMLLELTHESIMDGG-FNP-EELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG-~~~-~~~~ 120 (172)
..++.+|+.+||+||| +++ ++++
T Consensus 26 ~eL~~eA~~~Al~DAG~l~~~~dId 50 (385)
T PRK06066 26 REMMFEAASRAYKDAGNINPRRDVD 50 (385)
T ss_pred HHHHHHHHHHHHHhcCCCCChhcCC
Confidence 6788999999999999 975 5665
No 75
>PRK12404 stage V sporulation protein AD; Provisional
Probab=56.30 E-value=9.2 Score=29.90 Aligned_cols=23 Identities=17% Similarity=0.319 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.+|+.+||++||+++++++
T Consensus 55 ~~L~~EA~~~AL~kAGI~~~DID 77 (334)
T PRK12404 55 RKLLEEACSRAIEKAKLRKEDIQ 77 (334)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 46889999999999999876654
No 76
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=56.10 E-value=12 Score=30.34 Aligned_cols=28 Identities=18% Similarity=0.354 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
..|+.+|+++||+|||+++++++ +|++|
T Consensus 28 ~~L~~~A~~~Al~dAgl~~~dID----~vi~g 55 (426)
T PRK08170 28 SDLAVAAGRALLNRQPFAPDDLD----EVILG 55 (426)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEE
Confidence 66788999999999999876665 35555
No 77
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=55.66 E-value=10 Score=30.76 Aligned_cols=23 Identities=9% Similarity=0.151 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.+|+.+||+|||+++.+++
T Consensus 38 ~eL~~eA~~~Al~dagl~~~dID 60 (430)
T PRK06365 38 RERVKKAFDYAMNDAGLTLADID 60 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC
Confidence 57889999999999999877665
No 78
>PLN03168 chalcone synthase; Provisional
Probab=55.49 E-value=9 Score=30.69 Aligned_cols=35 Identities=11% Similarity=0.157 Sum_probs=26.3
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
+..+......-...|+.+|+++||++||+++++++
T Consensus 90 ~~~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId 124 (389)
T PLN03168 90 LNVRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDIT 124 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 34455555566677999999999999999876553
No 79
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=55.37 E-value=11 Score=30.17 Aligned_cols=24 Identities=25% Similarity=0.364 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..|+.+++++||+|||+++++++.
T Consensus 33 ~~L~~~a~~~AL~~agl~~~dID~ 56 (394)
T PRK06445 33 EELAAMLINRLIEKTGIKPEEIDD 56 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCe
Confidence 567788999999999998877764
No 80
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=55.20 E-value=7.9 Score=30.75 Aligned_cols=26 Identities=42% Similarity=0.595 Sum_probs=22.7
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
+|||++++.+...+++|++|....++
T Consensus 84 ~dAgl~~~~~~~~~~gv~~g~~~~~~ 109 (406)
T cd00834 84 ADAGLDPEELDPERIGVVIGSGIGGL 109 (406)
T ss_pred HHcCCCcccCCccceEEEEccCCcch
Confidence 58999999999999999999877654
No 81
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=54.91 E-value=8.9 Score=30.58 Aligned_cols=26 Identities=19% Similarity=0.267 Sum_probs=22.0
Q ss_pred CCCCCCCCC-CCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEE-LRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~-~~~~~~~V~vg~~~~~~ 26 (172)
||||++++. +...++||++|....++
T Consensus 85 ~dAGl~~~~~~~~~~~gv~~g~~~~~~ 111 (407)
T cd00828 85 ADAGITDPYEVHPSEVGVVVGSGMGGL 111 (407)
T ss_pred HhCCCCccccCCccCeEEEEeeccCCH
Confidence 589999988 89999999999875543
No 82
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=54.80 E-value=15 Score=29.97 Aligned_cols=23 Identities=9% Similarity=0.248 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCC--CC
Q psy11963 98 LRMLLELTHESIMDGGFNPEE--LR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~--~~ 120 (172)
..|+.+++++||+|||+++.+ ++
T Consensus 49 ~eL~~~a~~~al~~agl~~~d~~ID 73 (438)
T PTZ00455 49 EELLATAIQGTLENTGLDGKAALVD 73 (438)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCcC
Confidence 567788999999999998776 65
No 83
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=54.53 E-value=9.3 Score=29.49 Aligned_cols=24 Identities=8% Similarity=0.184 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..-|+.+|+++||+++|+++++++
T Consensus 52 ~~~la~~Aa~~aL~~ag~~~~~Id 75 (326)
T PRK05963 52 LSDLAASAGDMALSDAGIERSDIA 75 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 467899999999999999776543
No 84
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=54.26 E-value=8.9 Score=30.52 Aligned_cols=25 Identities=36% Similarity=0.432 Sum_probs=21.4
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTE 25 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~ 25 (172)
+|||++++.+.+.++||++|.....
T Consensus 84 ~dAgl~~~~~~~~~~gv~~g~~~~~ 108 (407)
T TIGR03150 84 EDSGLDIEEEDAERVGVIIGSGIGG 108 (407)
T ss_pred HhcCCCcccCCccceEEEEecCCCc
Confidence 5899999999999999999975443
No 85
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=54.11 E-value=4.4 Score=32.69 Aligned_cols=27 Identities=26% Similarity=0.252 Sum_probs=22.4
Q ss_pred CCCCCC-CCCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGFN-PEELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~-~~~~~~~~~~V~vg~~~~~~~ 27 (172)
+|||+. ++.+...++||++|.....+.
T Consensus 90 ~dAGl~~~~~~~~~~~Gv~~g~~~~~~~ 117 (421)
T PTZ00050 90 ADAKLDILSEKDQERIGVNIGSGIGSLA 117 (421)
T ss_pred HHcCCCcccccCcccEEEEEccCcccHH
Confidence 589998 889999999999997765554
No 86
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=53.65 E-value=15 Score=29.59 Aligned_cols=23 Identities=4% Similarity=0.244 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCC
Q psy11963 98 LRMLLELTHESIMDG-GFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dA-G~~~~~~~ 120 (172)
..++.+++++||+|+ |+++++++
T Consensus 28 ~eL~~~A~~~AL~da~gl~~~dID 51 (406)
T PRK07851 28 DDLAAQMVRAALDKVPALDPTDID 51 (406)
T ss_pred HHHHHHHHHHHHHhccCCCHHHCC
Confidence 567889999999997 99887766
No 87
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=53.58 E-value=14 Score=30.76 Aligned_cols=23 Identities=13% Similarity=0.306 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhCCCC--CCCCC
Q psy11963 98 LRMLLELTHESIMDGGFN--PEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~--~~~~~ 120 (172)
..|+.+|+++||+|||+. .+.++
T Consensus 28 ~~L~~eA~~~Al~DAGl~~~~~dID 52 (498)
T PRK08257 28 VDLMAAAARAAAADAGADAVLEAID 52 (498)
T ss_pred HHHHHHHHHHHHHhcCCCcCHHHCC
Confidence 568899999999999997 55555
No 88
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=52.78 E-value=13 Score=29.81 Aligned_cols=29 Identities=14% Similarity=0.172 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
..|+.+++++||+|||+++++++ .|++|+
T Consensus 27 ~eLa~~A~~~aL~~agl~~~dID----~vi~g~ 55 (393)
T PRK08235 27 TELGGIAIKEALERANVSAEDVE----EVIMGT 55 (393)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEe
Confidence 55778899999999999877665 355553
No 89
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=52.77 E-value=10 Score=29.93 Aligned_cols=23 Identities=4% Similarity=-0.044 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
...++.+|+++||+++|++++++
T Consensus 60 ~~~la~~Aa~~aL~~a~~~~~dI 82 (353)
T PRK12880 60 VSDLGKHAANTLLQGLNIDKNSL 82 (353)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHC
Confidence 56788999999999999987654
No 90
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=52.69 E-value=2.7 Score=31.02 Aligned_cols=27 Identities=33% Similarity=0.802 Sum_probs=22.5
Q ss_pred CCCCCCCCCCCCCc-ceEEEeeecCccc
Q psy11963 1 MDGGFNPEELRGTR-TGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~~~~~~~~~-~~V~vg~~~~~~~ 27 (172)
+|||+.++.+++.+ +||++|....++.
T Consensus 100 ~dAg~~~~~~~~~~r~gv~~G~~~~~~~ 127 (254)
T PF00109_consen 100 EDAGLDPDDLDGERRVGVFVGSSSGDYE 127 (254)
T ss_dssp HHHTSTGGGHTGGGTEEEEEEESSSHHH
T ss_pred ccccccccccccccceeecccccccccc
Confidence 47899998888886 9999998888653
No 91
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=52.47 E-value=9 Score=30.57 Aligned_cols=24 Identities=13% Similarity=0.163 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...|+.+|+++||+|||+++++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID 44 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELID 44 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 367889999999999999876665
No 92
>KOG1406|consensus
Probab=51.63 E-value=15 Score=27.99 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCcc
Q psy11963 100 MLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGY 149 (172)
Q Consensus 100 ~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~ 149 (172)
++-+|...||.|+++..+.++..-+|-+.|.+.-.-+.+.+-+...+.-+
T Consensus 32 ~a~ea~tkal~da~ikys~vqqa~vgyvfgdstcgqraiyevgmtgipi~ 81 (408)
T KOG1406|consen 32 FAKEAITKALQDAGIKYSEVQQAVVGYVFGDSTCGQRAIYEVGMTGIPIY 81 (408)
T ss_pred HHHHHHHHHHHhcCCCHHHHHhhhheeeecCCccchHHHHhccccCccee
Confidence 34567789999999988888877889888855433344444444444433
No 93
>PRK04262 hypothetical protein; Provisional
Probab=51.34 E-value=12 Score=29.32 Aligned_cols=31 Identities=23% Similarity=0.541 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+.+|+++||++||+++++++ .+++++.
T Consensus 51 ~~~la~~Aa~~aL~~ag~~~~dId----~li~~s~ 81 (347)
T PRK04262 51 TATIAVEAARNALKRAGIDPKEIG----AVYVGSE 81 (347)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 467889999999999999776554 3445543
No 94
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=50.31 E-value=10 Score=29.88 Aligned_cols=30 Identities=23% Similarity=0.513 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
...|+.+++++||+|||+++++++ +|++|.
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id----~vi~g~ 45 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADID----AVVVGN 45 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEec
Confidence 467889999999999999765443 455553
No 95
>PLN03171 chalcone synthase-like protein; Provisional
Probab=50.11 E-value=12 Score=30.02 Aligned_cols=34 Identities=15% Similarity=0.222 Sum_probs=25.2
Q ss_pred CHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 87 HSKLANVMDPQLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 87 ~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..+..........|+.+|+++||+++|+++++++
T Consensus 98 ~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId 131 (399)
T PLN03171 98 DARLDIAADAVPELAAEAAKKAIAEWGRPAADIT 131 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 3444444556678999999999999999776543
No 96
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=49.11 E-value=26 Score=25.96 Aligned_cols=32 Identities=13% Similarity=0.314 Sum_probs=22.7
Q ss_pred HHHhhcChHHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 89 KLANVMDPQLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 89 ~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
+......-...++.+|+.+||+++|++++++.
T Consensus 92 R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIt 123 (226)
T PF00195_consen 92 RNALYAEEAPPLAEEAARKALAEAGLDPSDIT 123 (226)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTS-GGGEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCcccc
Confidence 33444455667889999999999999776543
No 97
>PRK06059 lipid-transfer protein; Provisional
Probab=48.98 E-value=11 Score=30.18 Aligned_cols=23 Identities=9% Similarity=0.264 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..++.+|+++||+|||+++++++
T Consensus 24 ~~La~~A~~~Al~dAgl~~~dId 46 (399)
T PRK06059 24 VEYGVVAARAALADAGLDWRDVQ 46 (399)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 67889999999999999765543
No 98
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=48.73 E-value=19 Score=28.93 Aligned_cols=28 Identities=18% Similarity=0.377 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
..|+.+++++||+|||++++.++. |++|
T Consensus 32 ~eL~~~a~~~aL~~Agi~~~dID~----vi~G 59 (397)
T PRK06954 32 PQLGAAAIAAAVERAGLKPEQIDE----VVMG 59 (397)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCE----EEEE
Confidence 567788999999999998776653 5555
No 99
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=46.51 E-value=75 Score=24.97 Aligned_cols=33 Identities=9% Similarity=0.046 Sum_probs=23.9
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.+..+|+..|.++||++++. .+..++.++++..
T Consensus 63 ~r~~~La~~Al~~aL~~a~~----~~~~~i~lil~~~ 95 (348)
T PRK06147 63 ERLAEMAAPAIAEALEGLPA----LDASEAPLLLCVA 95 (348)
T ss_pred HHHHHHHHHHHHHHHHhccc----ccccCCcEEEEeC
Confidence 35678999999999999883 1234577777743
No 100
>PLN03169 chalcone synthase family protein; Provisional
Probab=45.97 E-value=17 Score=29.06 Aligned_cols=25 Identities=16% Similarity=0.220 Sum_probs=20.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
.....|+.+|+++||+++|++++++
T Consensus 104 e~~~~La~~Aa~~aL~~ag~~~~dI 128 (391)
T PLN03169 104 EAVTQMAVEASLACIKEWGRPVSDI 128 (391)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHC
Confidence 3456799999999999999976654
No 101
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=44.65 E-value=16 Score=30.02 Aligned_cols=32 Identities=16% Similarity=0.284 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
..-|++.|++.||+++|+++++++ -|++|+..
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~Id----llivaTeT 84 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIG----RLEVGSET 84 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCC
Confidence 457889999999999998776543 24555443
No 102
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=43.85 E-value=18 Score=27.58 Aligned_cols=25 Identities=12% Similarity=0.415 Sum_probs=20.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
....++.+|+++||+++|+++++++
T Consensus 49 ~~~~la~~A~~~al~~ag~~~~~Id 73 (320)
T cd00830 49 TTSDLAVEAAKKALEDAGIDADDID 73 (320)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC
Confidence 3578899999999999999766543
No 103
>PRK06840 hypothetical protein; Validated
Probab=43.51 E-value=16 Score=28.37 Aligned_cols=23 Identities=13% Similarity=0.381 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
...++.+|+++||+++|++++++
T Consensus 53 ~~~la~~Aa~~aL~~ag~~~~dI 75 (339)
T PRK06840 53 TSDMAIAAAKPALKQAGVDPAAI 75 (339)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHC
Confidence 46788999999999999977654
No 104
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=43.51 E-value=18 Score=28.46 Aligned_cols=29 Identities=10% Similarity=0.322 Sum_probs=22.3
Q ss_pred HhhcChHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 91 ANVMDPQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 91 ~~~~d~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
.....-...++.+|+++||+++|++++++
T Consensus 79 ~~~~~~~~~la~~Aa~~aL~~a~~~~~~I 107 (361)
T cd00831 79 DIALEEARELAEEAARGALDEAGLRPSDI 107 (361)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCHHHC
Confidence 33344567899999999999999876544
No 105
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=42.86 E-value=19 Score=27.60 Aligned_cols=23 Identities=9% Similarity=0.393 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
...++.+|+++||+++|++++++
T Consensus 53 ~~~la~~A~~~al~~ag~~~~~I 75 (325)
T PRK12879 53 TSDLAIKAAERALARAGLDAEDI 75 (325)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHC
Confidence 46788999999999999976554
No 106
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=42.23 E-value=22 Score=28.62 Aligned_cols=29 Identities=14% Similarity=0.367 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHhC-CCCCCCCCCCcceEEEcc
Q psy11963 98 LRMLLELTHESIMDG-GFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 98 ~~~~l~aa~eAl~dA-G~~~~~~~~~r~gv~vG~ 130 (172)
..|+.+++++||+++ |+++++++ .|++|.
T Consensus 32 ~eLa~~A~~~AL~~a~gl~~~dID----~vi~g~ 61 (399)
T PRK09052 32 DDLLAHVLRSAVAQVPGLDPKLIE----DAIVGC 61 (399)
T ss_pred HHHHHHHHHHHHHhccCcCHHHCC----EEEEEe
Confidence 567888999999997 99877665 366664
No 107
>PF10819 DUF2564: Protein of unknown function (DUF2564) ; InterPro: IPR020314 This entry contains proteins with no known function.
Probab=41.86 E-value=24 Score=21.37 Aligned_cols=19 Identities=32% Similarity=0.471 Sum_probs=13.7
Q ss_pred hhcChHHHHHHHHHHHHHHhCC
Q psy11963 92 NVMDPQLRMLLELTHESIMDGG 113 (172)
Q Consensus 92 ~~~d~~~~~~l~aa~eAl~dAG 113 (172)
+.|||.+ |+.|.+||+||.
T Consensus 24 ~smdp~~---Le~A~qAve~Ar 42 (79)
T PF10819_consen 24 MSMDPDQ---LEHATQAVEDAR 42 (79)
T ss_pred hcCCHHH---HHHHHHHHHHHH
Confidence 4467765 678888888875
No 108
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=41.60 E-value=22 Score=28.26 Aligned_cols=24 Identities=17% Similarity=0.407 Sum_probs=19.8
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
....|+.+|+++||+++|++++++
T Consensus 95 ~~~~La~~Aa~~aL~~agi~~~dI 118 (379)
T PLN02326 95 TLTSLAVEAAKKALEMAGVDPEDV 118 (379)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHC
Confidence 356889999999999999876544
No 109
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=40.76 E-value=18 Score=28.05 Aligned_cols=24 Identities=8% Similarity=0.309 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...++.+|+++||+++|+.+++++
T Consensus 61 ~~~la~~Aa~~aL~~ag~~~~~Id 84 (338)
T PRK09258 61 LSDGAIAAGRKALAEAGIDPSDIG 84 (338)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 357889999999999999776543
No 110
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=40.69 E-value=22 Score=27.46 Aligned_cols=24 Identities=13% Similarity=0.290 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...++.+|+++||+++|+++++++
T Consensus 51 ~~~la~~A~~~aL~~ag~~~~dId 74 (326)
T CHL00203 51 LTKLAAEAANKALDKAHMDPLEID 74 (326)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 367889999999999999765543
No 111
>PRK09051 beta-ketothiolase; Provisional
Probab=40.52 E-value=23 Score=28.40 Aligned_cols=23 Identities=13% Similarity=0.387 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.+|+++||++||+++++++
T Consensus 28 ~eL~~~A~~~AL~~agi~~~dID 50 (394)
T PRK09051 28 TDLGATVVREALARAGVDPDQVG 50 (394)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcC
Confidence 56778899999999999877665
No 112
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=39.75 E-value=20 Score=28.90 Aligned_cols=26 Identities=27% Similarity=0.433 Sum_probs=21.1
Q ss_pred CCCCCCCCCC-CCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEEL-RGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~-~~~~~~V~vg~~~~~~ 26 (172)
+|||++++.+ ...++||++|....++
T Consensus 95 ~dAgl~~~~~~~~~~~Gv~~g~~~g~~ 121 (424)
T PRK06333 95 AQAGWDPDTLEDRERTATIIGSGVGGF 121 (424)
T ss_pred HhcCCCccccCCcccEEEEEecCcccH
Confidence 5899998887 7889999999765443
No 113
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=38.42 E-value=33 Score=27.47 Aligned_cols=32 Identities=6% Similarity=0.068 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
....++..+.++||+++|++++.++ .|++|..
T Consensus 22 ~~~el~~~a~~~Al~~agl~p~dID----~vi~g~~ 53 (393)
T cd00826 22 LAHEAGAKAIAAALEPAGVAAGAVE----EACLGQV 53 (393)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEc
Confidence 3456778899999999999876665 3556643
No 114
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=38.05 E-value=35 Score=27.71 Aligned_cols=23 Identities=13% Similarity=0.203 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
..|+.++.++||+|+|++++.++
T Consensus 30 ~eL~~~a~~~al~~agl~~~~ID 52 (428)
T PRK08963 30 VDLGKMVVGELLARSEIDPELIE 52 (428)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC
Confidence 45677899999999999876665
No 115
>PLN02287 3-ketoacyl-CoA thiolase
Probab=35.48 E-value=29 Score=28.50 Aligned_cols=24 Identities=21% Similarity=0.364 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..|+.+++++||+|||+++++++.
T Consensus 72 ~eLa~eA~~~AL~dAgl~~~dID~ 95 (452)
T PLN02287 72 DDLLAPVLKAVVEKTGLNPSEVGD 95 (452)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE
Confidence 678889999999999998776653
No 116
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=34.41 E-value=27 Score=29.36 Aligned_cols=25 Identities=40% Similarity=0.628 Sum_probs=19.7
Q ss_pred CCCCCCCC---CCCCCcceEEEeeecCc
Q psy11963 1 MDGGFNPE---ELRGTRTGVYIGLMTTE 25 (172)
Q Consensus 1 ~~ag~~~~---~~~~~~~~V~vg~~~~~ 25 (172)
+|||++++ .+++.++||++|....+
T Consensus 212 ~dAGl~~~~~~~~~~~r~GV~vGt~~g~ 239 (540)
T PLN02787 212 ADGGITEDVMKELDKTKCGVLIGSAMGG 239 (540)
T ss_pred HHcCCCcccccccCCCceEEEEEeccch
Confidence 58999765 67889999999976543
No 117
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=33.09 E-value=47 Score=26.60 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
..|+.++.++||+|+|++++.++. |++|
T Consensus 27 ~eL~~~a~~~aL~~agi~~~~Id~----v~~G 54 (387)
T PRK07850 27 AELLGAVQRAVLDRAGIDPGDVEQ----VIGG 54 (387)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEE
Confidence 557788999999999998776653 5555
No 118
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=32.73 E-value=34 Score=27.17 Aligned_cols=24 Identities=21% Similarity=0.393 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELR 120 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~ 120 (172)
...++.+|+++||+++|+++++++
T Consensus 63 ~~~La~~A~~~aL~~agi~~~dId 86 (378)
T PRK06816 63 NAQMAAEAIRDLLDDAGFSLGDIE 86 (378)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC
Confidence 467899999999999999776554
No 119
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=32.28 E-value=37 Score=25.97 Aligned_cols=31 Identities=13% Similarity=0.309 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...++.+++++||+++|+++++++ .|++|+.
T Consensus 48 ~~~l~~~a~~~aL~~ag~~~~~Id----~li~~~~ 78 (324)
T cd00827 48 VPTMAVEAARRALERAGIDPDDIG----LLIVATE 78 (324)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcC
Confidence 467889999999999998766554 3555543
No 120
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=29.78 E-value=32 Score=22.23 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=16.1
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 101 LLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 101 ~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
...+..+||++||++++ .+.++.+
T Consensus 27 ~~~~i~~al~~agi~~~-----~I~~i~~ 50 (119)
T PF02801_consen 27 LARAIRRALADAGISPE-----DIDYIEA 50 (119)
T ss_dssp HHHHHHHHHHHHTS-GG-----GEEEEE-
T ss_pred HHHHHHHHHhhhccccc-----cceeeee
Confidence 34567899999999754 4566665
No 121
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=28.66 E-value=75 Score=25.51 Aligned_cols=28 Identities=14% Similarity=0.166 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
..|+.+++++||+|||+.++.++ .|++|
T Consensus 28 ~eLa~~A~~~AL~~ag~~~~dID----~vi~g 55 (391)
T PRK07661 28 DDLGALVVKETLKRAGNYEGPID----DLIIG 55 (391)
T ss_pred HHHHHHHHHHHHHhcCCChhHCC----EEEEE
Confidence 56778899999999987555444 35555
No 122
>PF06059 DUF930: Domain of Unknown Function (DUF930); InterPro: IPR009273 This is a family of bacterial proteins with undetermined function. All bacteria in this family are from the Rhizobiales order.
Probab=27.87 E-value=69 Score=20.48 Aligned_cols=22 Identities=14% Similarity=0.052 Sum_probs=17.8
Q ss_pred hhcChHHHHHHHHHHHHHHhCC
Q psy11963 92 NVMDPQLRMLLELTHESIMDGG 113 (172)
Q Consensus 92 ~~~d~~~~~~l~aa~eAl~dAG 113 (172)
..|+|..|+...|.-||++.-+
T Consensus 2 ~~L~p~~R~~QlC~~Ea~~qi~ 23 (101)
T PF06059_consen 2 GKLPPSERLEQLCDLEAMEQIR 23 (101)
T ss_pred CCCCHHHHHHHHhHHHHHHHHh
Confidence 3578899999999999988744
No 123
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=27.32 E-value=1.2e+02 Score=24.81 Aligned_cols=28 Identities=11% Similarity=0.240 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
..|+.++.++||+|+|++++.++. |++|
T Consensus 32 ~~L~~~a~~~al~~agl~~~~Id~----vi~G 59 (430)
T TIGR02446 32 VDLGKMVVSELLARSEIDPKLIEQ----LVFG 59 (430)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE----EEEE
Confidence 567788999999999998877664 4555
No 124
>PLN02932 3-ketoacyl-CoA synthase
Probab=27.23 E-value=50 Score=27.39 Aligned_cols=25 Identities=8% Similarity=0.324 Sum_probs=20.3
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
.-...++..|+.+||+++|++++++
T Consensus 146 ~ea~~la~~Aa~~aL~~agi~p~dI 170 (478)
T PLN02932 146 KETEEVIIGAVDNLFRNTGISPSDI 170 (478)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHC
Confidence 3456788999999999999987654
No 125
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=27.11 E-value=50 Score=26.62 Aligned_cols=25 Identities=16% Similarity=0.084 Sum_probs=19.6
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTE 25 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~ 25 (172)
+|||+.+......++||++|.....
T Consensus 86 ~dAGl~~~~~~~~r~GvivGt~~g~ 110 (398)
T PRK06519 86 DDAGIKGNEELLSTMDMIVAAGGGE 110 (398)
T ss_pred HHcCCCCCCCCccceEEEEEeCCCc
Confidence 5899987666677999999976554
No 126
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=27.01 E-value=45 Score=26.80 Aligned_cols=24 Identities=8% Similarity=0.201 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..|+.++.++||+|+|++++.++.
T Consensus 28 ~~L~~~a~~~al~~agi~~~~Id~ 51 (392)
T PRK06633 28 PMLAAHLIKDILQNSKIDPALVNE 51 (392)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCE
Confidence 346678999999999998776654
No 127
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=26.98 E-value=49 Score=26.69 Aligned_cols=24 Identities=8% Similarity=0.246 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..|+.++.++||+|+|++++.++.
T Consensus 27 ~eL~~~a~~~al~~agi~~~~Id~ 50 (401)
T PRK08131 27 DDLAATVIRRLLEKSGFPGDDIED 50 (401)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE
Confidence 557788999999999998776654
No 128
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=26.10 E-value=50 Score=27.20 Aligned_cols=32 Identities=9% Similarity=0.095 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
..-|++.|+..+|+++|+++++++ -|++|+..
T Consensus 50 ~~tma~~AA~~lL~~a~id~~~Id----~Liv~TeS 81 (454)
T TIGR01833 50 INSLCLTVVSKLMERYNIDYNQIG----RLEVGTET 81 (454)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEECCC
Confidence 456889999999999998765443 24555443
No 129
>TIGR02863 spore_sspJ small, acid-soluble spore protein, SspJ family. RL J Bacteriol. 1998 Dec;180(24):6704-12.
Probab=24.37 E-value=40 Score=17.75 Aligned_cols=11 Identities=18% Similarity=0.296 Sum_probs=6.7
Q ss_pred HHHHHHHhCCC
Q psy11963 104 LTHESIMDGGF 114 (172)
Q Consensus 104 aa~eAl~dAG~ 114 (172)
+.+.||||||-
T Consensus 19 ~v~gaLEdAg~ 29 (47)
T TIGR02863 19 AIQGALEDAGQ 29 (47)
T ss_pred HHHHHHHHHHH
Confidence 34566777763
No 130
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=22.64 E-value=65 Score=26.24 Aligned_cols=24 Identities=21% Similarity=0.122 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..|+.++.++||+|+|++++.++.
T Consensus 32 ~eL~~~a~~~al~~agl~~~~Id~ 55 (427)
T PRK09268 32 QDMLTAALDGLVDRFGLQGERLGE 55 (427)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCE
Confidence 567788999999999998766654
No 131
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=20.76 E-value=69 Score=25.88 Aligned_cols=24 Identities=13% Similarity=0.200 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCC
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRG 121 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~ 121 (172)
..|+.+++++||+++|++++.++.
T Consensus 29 ~dLa~~A~~~al~~agi~p~~ID~ 52 (402)
T PRK08242 29 VRLAAGLLEALRDRNGLDTAAVDD 52 (402)
T ss_pred HHHHHHHHHHHHHHcCCCHHHcCE
Confidence 346677899999999998766553
No 132
>PF06135 DUF965: Bacterial protein of unknown function (DUF965); InterPro: IPR009309 This family consists of several hypothetical bacterial proteins. The function of the family is unknown.
Probab=20.39 E-value=1.5e+02 Score=18.04 Aligned_cols=20 Identities=25% Similarity=0.634 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHhCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNP 116 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~ 116 (172)
..+-.|...++||+..|+.|
T Consensus 16 ~~~~iL~~Vy~AL~EKGYnP 35 (79)
T PF06135_consen 16 EIREILKQVYAALEEKGYNP 35 (79)
T ss_pred hHHHHHHHHHHHHHHcCCCh
Confidence 45677889999999999975
Done!