Query psy11963
Match_columns 172
No_of_seqs 208 out of 1929
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 23:27:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11963.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11963hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hhd_A Fatty acid synthase; tr 99.9 8.5E-25 2.9E-29 186.8 11.1 150 13-171 5-154 (965)
2 2vz8_A Fatty acid synthase; tr 99.9 8.5E-25 2.9E-29 200.1 11.6 149 14-171 4-152 (2512)
3 2qo3_A Eryaii erythromycin pol 99.9 2.3E-24 7.9E-29 183.4 5.9 150 14-171 8-168 (915)
4 2hg4_A DEBS, 6-deoxyerythronol 99.9 6.8E-24 2.3E-28 180.6 7.8 149 14-171 41-190 (917)
5 3o04_A LMO2201 protein, beta-k 99.8 6.3E-21 2.1E-25 150.3 9.6 143 14-171 6-155 (413)
6 3kzu_A 3-oxoacyl-(acyl-carrier 99.8 5.5E-21 1.9E-25 151.2 8.6 146 14-171 12-169 (428)
7 3ho9_A 3-oxoacyl-[acyl-carrier 99.8 1.6E-20 5.6E-25 148.4 9.6 146 11-171 17-169 (427)
8 4ddo_A 3-oxoacyl-[acyl-carrier 99.8 2.4E-20 8.1E-25 148.4 7.0 148 12-171 24-184 (451)
9 1tqy_A Beta-ketoacyl synthase/ 99.8 6.1E-20 2.1E-24 145.1 8.6 143 14-171 5-160 (424)
10 1e5m_A KAS II, beta ketoacyl a 99.8 8.3E-20 2.8E-24 144.0 9.1 143 14-171 9-158 (416)
11 2iwz_A 3-oxoacyl-[acyl-carrier 99.8 3.2E-20 1.1E-24 147.2 6.3 147 13-171 22-179 (438)
12 2gqd_A 3-oxoacyl-[acyl-carrier 99.8 1.1E-19 3.8E-24 144.0 7.2 143 14-171 30-179 (437)
13 4ewg_A Beta-ketoacyl synthase; 99.8 3.3E-19 1.1E-23 140.4 9.8 143 14-171 8-159 (412)
14 2wge_A 3-oxoacyl-[acyl-carrier 99.8 2.3E-19 7.7E-24 141.5 8.9 141 13-171 13-162 (416)
15 1tqy_B Actinorhodin polyketide 99.8 9E-20 3.1E-24 143.7 6.5 144 13-171 10-160 (415)
16 1ox0_A Beta ketoacyl-acyl carr 99.8 1.7E-19 5.9E-24 142.7 7.3 143 14-171 25-174 (430)
17 1j3n_A 3-oxoacyl-(acyl-carrier 99.8 2.2E-19 7.6E-24 141.2 7.6 142 14-171 4-152 (408)
18 2gp6_A 3-oxoacyl-[acyl-carrier 99.8 5E-19 1.7E-23 140.1 9.5 141 13-171 29-178 (434)
19 2vba_A 3-oxoacyl-[acyl-carrier 99.8 9.3E-20 3.2E-24 143.3 3.1 142 14-171 4-154 (406)
20 2ix4_A 3-oxoacyl-[acyl-carrier 99.8 2E-19 6.9E-24 142.4 3.9 144 15-171 4-170 (431)
21 3mqd_A Beta-ketoacyl synthase; 99.7 5E-19 1.7E-23 140.0 2.8 142 14-171 25-173 (428)
22 2uv9_A Fatty acid synthase alp 99.5 7.7E-15 2.6E-19 130.5 7.6 128 32-171 1133-1271(1878)
23 2pff_A Fatty acid synthase sub 99.5 6.3E-15 2.2E-19 128.3 4.0 127 33-171 960-1097(1688)
24 2uv8_A Fatty acid synthase sub 99.5 2.4E-14 8.2E-19 127.6 7.0 128 32-171 1158-1296(1887)
25 3zen_D Fatty acid synthase; tr 99.4 5.6E-13 1.9E-17 123.6 8.8 121 40-171 2599-2731(3089)
26 2vz8_A Fatty acid synthase; tr 97.4 3.2E-05 1.1E-09 72.4 1.0 63 1-63 91-153 (2512)
27 2h84_A Steely1; thiolase-fold, 97.2 0.00032 1.1E-08 54.1 4.1 51 78-132 71-126 (374)
28 3hhd_A Fatty acid synthase; tr 96.8 0.00013 4.4E-09 63.0 -1.1 63 1-63 93-155 (965)
29 2ebd_A 3-oxoacyl-[acyl-carrier 96.4 0.0039 1.3E-07 46.6 4.8 34 95-132 48-81 (309)
30 2hg4_A DEBS, 6-deoxyerythronol 96.3 0.00048 1.6E-08 59.2 -0.8 63 1-63 129-191 (917)
31 1mzj_A Beta-ketoacylsynthase I 96.2 0.0049 1.7E-07 46.8 4.6 35 95-133 58-92 (339)
32 1ulq_A Putative acetyl-COA ace 96.0 0.0073 2.5E-07 47.0 4.7 33 97-133 26-58 (401)
33 1wdk_C 3-ketoacyl-COA thiolase 96.0 0.0047 1.6E-07 47.9 3.4 34 96-133 29-63 (390)
34 1hnj_A Beta-ketoacyl-acyl carr 95.9 0.01 3.6E-07 44.4 5.0 35 94-132 48-82 (317)
35 2wu9_A 3-ketoacyl-COA thiolase 95.9 0.012 4.1E-07 46.5 5.4 34 97-134 55-88 (442)
36 1wl4_A Acetyl-coenzyme A acety 95.7 0.01 3.5E-07 46.2 4.4 32 97-132 30-61 (397)
37 2vu1_A Acetyl-COA acetyltransf 95.6 0.0053 1.8E-07 47.7 2.3 29 97-125 27-55 (392)
38 1afw_A 3-ketoacetyl-COA thiola 95.6 0.023 7.8E-07 44.2 5.8 33 97-133 35-71 (393)
39 1u0m_A Putative polyketide syn 95.5 0.014 4.9E-07 45.0 4.4 45 83-131 70-114 (382)
40 1u6e_A 3-oxoacyl-[acyl-carrier 95.4 0.015 5.2E-07 43.8 4.3 35 95-133 59-93 (335)
41 2qo3_A Eryaii erythromycin pol 95.4 0.0018 6.1E-08 55.7 -1.0 62 1-63 108-169 (915)
42 1ub7_A 3-oxoacyl-[acyl-carrier 95.1 0.029 9.8E-07 42.1 5.1 34 95-132 48-81 (322)
43 2ib8_A Acetyl-COA acetyltransf 95.0 0.01 3.5E-07 46.1 2.4 30 97-130 32-61 (395)
44 1zow_A 3-oxoacyl-[acyl-carrier 94.9 0.036 1.2E-06 41.4 4.9 34 95-132 49-82 (313)
45 2iik_A 3-ketoacyl-COA thiolase 94.9 0.039 1.3E-06 43.2 5.2 34 96-133 54-87 (418)
46 3a5r_A Benzalacetone synthase; 94.2 0.038 1.3E-06 42.7 3.7 50 78-131 79-128 (387)
47 2d3m_A Pentaketide chromone sy 93.5 0.083 2.8E-06 41.1 4.6 50 78-131 96-145 (406)
48 3tsy_A Fusion protein 4-coumar 92.5 0.12 4.2E-06 44.6 4.5 41 86-130 678-718 (979)
49 4dd5_A Acetyl-COA acetyltransf 92.0 0.17 5.9E-06 39.2 4.4 32 97-132 31-62 (396)
50 3goa_A 3-ketoacyl-COA thiolase 91.5 0.26 8.9E-06 38.1 5.0 33 95-131 25-58 (387)
51 4dfe_A 3-oxoacyl-[acyl-carrier 90.4 0.3 1E-05 36.8 4.3 34 96-133 64-97 (333)
52 3svk_A Acetyl-COA acetyltransf 90.1 0.32 1.1E-05 37.9 4.3 32 96-131 31-63 (407)
53 2x3e_A 3-oxoacyl-[acyl-carrier 89.8 0.36 1.2E-05 36.2 4.3 32 95-132 51-82 (331)
54 1xes_A Dihydropinosylvin synth 89.3 0.52 1.8E-05 36.7 5.0 42 86-131 114-155 (413)
55 1tqy_A Beta-ketoacyl synthase/ 89.2 0.078 2.7E-06 41.5 0.2 28 1-28 86-113 (424)
56 3s21_A 3-oxoacyl-[ACP] synthas 88.9 0.41 1.4E-05 36.3 4.0 33 96-132 67-99 (345)
57 1ee0_A 2-pyrone synthase; poly 88.5 0.2 6.9E-06 38.9 2.1 50 78-131 88-137 (402)
58 4e1l_A Acetoacetyl-COA thiolas 87.5 0.43 1.5E-05 36.9 3.4 31 97-131 29-59 (395)
59 1i88_A CHS2, chalcone synthase 87.3 0.23 7.9E-06 38.3 1.8 49 79-131 84-132 (389)
60 2gqd_A 3-oxoacyl-[acyl-carrier 87.1 0.055 1.9E-06 42.6 -1.9 26 1-26 111-136 (437)
61 1e5m_A KAS II, beta ketoacyl a 86.4 0.063 2.2E-06 41.9 -1.9 26 1-26 90-115 (416)
62 3ss6_A Acetyl-COA acetyltransf 86.4 0.61 2.1E-05 36.0 3.7 31 97-131 29-59 (394)
63 1ted_A PKS18; thiolase fold, s 86.4 0.73 2.5E-05 35.5 4.2 33 95-131 111-143 (393)
64 3o04_A LMO2201 protein, beta-k 86.1 0.044 1.5E-06 42.8 -2.9 25 1-25 87-111 (413)
65 3mqd_A Beta-ketoacyl synthase; 85.9 0.04 1.4E-06 43.2 -3.2 27 1-27 105-131 (428)
66 3il3_A 3-oxoacyl-[acyl-carrier 85.6 1.1 3.8E-05 33.6 4.7 32 97-132 58-89 (323)
67 1tqy_B Actinorhodin polyketide 85.2 0.11 3.6E-06 40.6 -1.1 28 1-28 92-119 (415)
68 1ox0_A Beta ketoacyl-acyl carr 82.4 0.16 5.5E-06 39.8 -1.2 26 1-26 106-131 (430)
69 3awk_A Chalcone synthase-like 81.8 0.66 2.3E-05 36.0 2.1 44 84-131 102-145 (402)
70 2vba_A 3-oxoacyl-[acyl-carrier 81.2 0.071 2.4E-06 41.5 -3.6 28 1-28 84-112 (406)
71 3kzu_A 3-oxoacyl-(acyl-carrier 80.7 0.099 3.4E-06 41.0 -3.0 25 1-25 100-125 (428)
72 3ho9_A 3-oxoacyl-[acyl-carrier 79.6 0.13 4.4E-06 40.3 -2.6 26 1-26 101-126 (427)
73 2ix4_A 3-oxoacyl-[acyl-carrier 77.6 0.15 5.3E-06 39.9 -2.7 27 1-27 101-128 (431)
74 2gp6_A 3-oxoacyl-[acyl-carrier 76.7 0.57 2E-05 36.8 0.3 26 1-28 112-137 (434)
75 3oit_A OS07G0271500 protein; t 75.4 1.1 3.8E-05 34.5 1.6 42 86-131 85-126 (387)
76 3il6_A 3-oxoacyl-[acyl-carrier 74.0 2.4 8.2E-05 31.7 3.1 32 97-132 52-83 (321)
77 2wge_A 3-oxoacyl-[acyl-carrier 73.8 0.4 1.4E-05 37.4 -1.3 25 1-27 96-120 (416)
78 4ewg_A Beta-ketoacyl synthase; 73.5 0.38 1.3E-05 37.4 -1.5 26 1-26 90-116 (412)
79 4efi_A 3-oxoacyl-(acyl-carrier 71.9 2.8 9.7E-05 31.8 3.1 32 97-132 66-97 (354)
80 3h78_A PQS biosynthetic enzyme 71.3 3.4 0.00012 31.4 3.5 32 97-132 74-105 (359)
81 4egv_A Acetyl-COA acetyltransf 70.8 1.9 6.6E-05 34.7 2.0 35 94-129 40-74 (520)
82 3ov2_A Curcumin synthase; type 70.2 1.8 6E-05 33.5 1.6 42 86-131 91-132 (393)
83 4ewp_A 3-oxoacyl-[acyl-carrier 69.9 2.6 8.7E-05 31.8 2.5 31 98-132 63-93 (350)
84 3gwa_A 3-oxoacyl-(acyl-carrier 68.5 4.3 0.00015 30.9 3.5 31 97-131 80-110 (365)
85 3led_A 3-oxoacyl-acyl carrier 68.4 1.8 6.2E-05 33.5 1.4 33 96-132 116-148 (392)
86 2iwz_A 3-oxoacyl-[acyl-carrier 68.3 0.21 7.4E-06 39.2 -3.9 27 1-27 110-137 (438)
87 2p0u_A Stilbenecarboxylate syn 68.1 2.5 8.4E-05 32.9 2.1 42 86-131 109-150 (413)
88 3lma_A Stage V sporulation pro 65.0 4.6 0.00016 30.8 2.9 30 98-131 56-85 (347)
89 4ddo_A 3-oxoacyl-[acyl-carrier 63.0 0.36 1.2E-05 38.1 -3.6 26 1-26 115-141 (451)
90 3euo_A Type III pentaketide sy 62.7 4.1 0.00014 31.2 2.4 42 87-132 71-112 (379)
91 1j3n_A 3-oxoacyl-(acyl-carrier 59.4 1.6 5.4E-05 33.8 -0.5 27 1-27 84-110 (408)
92 3s0r_A De novo designed helica 58.6 9.6 0.00033 17.1 2.2 13 98-110 17-29 (30)
93 2v4w_A Hydroxymethylglutaryl-C 56.2 3.9 0.00013 32.4 1.3 32 97-132 54-85 (460)
94 3v7i_A Putative polyketide syn 53.7 5.4 0.00019 31.1 1.7 33 95-131 135-167 (413)
95 3e1h_A PKSIIINC, putative unch 51.7 5 0.00017 31.8 1.2 35 94-132 107-141 (465)
96 3s3l_A CERJ; acyltransferase, 49.1 7.6 0.00026 29.5 1.8 31 97-131 54-84 (357)
97 2p8u_A Hydroxymethylglutaryl-C 48.3 7.4 0.00025 30.9 1.7 31 97-131 73-103 (478)
98 2f82_A HMG-COA synthase; HMGS1 47.8 9.4 0.00032 30.0 2.2 21 97-117 52-72 (450)
99 2wya_A Hydroxymethylglutaryl-C 47.2 6.6 0.00023 30.9 1.3 30 98-132 55-85 (460)
100 2uv9_A Fatty acid synthase alp 45.6 6.3 0.00022 36.7 1.0 27 1-27 1199-1230(1878)
101 2pff_A Fatty acid synthase sub 28.3 13 0.00045 34.1 0.2 26 1-26 1025-1055(1688)
102 3zen_D Fatty acid synthase; tr 25.7 22 0.00075 35.1 1.2 25 1-25 2660-2688(3089)
No 1
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.91 E-value=8.5e-25 Score=186.81 Aligned_cols=150 Identities=43% Similarity=0.757 Sum_probs=132.2
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHh
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLAN 92 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~ 92 (172)
....|+|||.+|... +++.+ |+.|.+|++.+.+.+ .+|+. +.|+.+.+.|+++++..||+.+|+|++++++
T Consensus 5 ~IaIvGmg~r~P~~~-----~~~~~--W~~l~~g~~~~~~~~-~~~~~-~~~~~~~~~g~~~~~~~FD~~~f~i~~~ea~ 75 (965)
T 3hhd_A 5 EVVIAGMSGKLPESE-----NLQEF--WDNLIGGVDMVTDDD-RRWKA-GLYGLPRRSGKLKDLSRFDASFFGVHPKQAH 75 (965)
T ss_dssp CEEEEEEEEEBTTBS-----SHHHH--HHHHHTTCCCEECSS-SSSCT-TGGGCCSCEECCSCSSCCCTTTTTCCHHHHH
T ss_pred CEEEEeeeEECCCCC-----CHHHH--HHHHHcCCCcccCCC-ccccc-ccccCcccccccCChhhcChhhcCCCHHHHh
Confidence 345788999999864 46778 999999999887643 45553 4555667889999999999999999999999
Q ss_pred hcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHHHHhCCCC
Q psy11963 93 VMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 93 ~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~~ 171 (172)
.||||||+++++++|||+|||++++.+++.++||++|++..+|.......+..+.++..+++..+++++|||+.|||++
T Consensus 76 ~mDp~~rL~leaa~eALedAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G 154 (965)
T 3hhd_A 76 TMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRG 154 (965)
T ss_dssp TSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCS
T ss_pred hcCHHHHHHHHHHHHHHHHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999888888888899999999999999999999999986
No 2
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.91 E-value=8.5e-25 Score=200.12 Aligned_cols=149 Identities=46% Similarity=0.762 Sum_probs=130.9
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...|||||.+|... +++.+ |+.+.+|++.+... ..+|+.. .|+.++++|+++++..||+.+|+|++++++.
T Consensus 4 iaI~G~~~~~p~~~-----~~~~~--w~~l~~g~~~~~~~-~~~~~~~-~~~~~~~~g~~~~~~~fd~~~f~i~~~ea~~ 74 (2512)
T 2vz8_A 4 VVIAGMSGKLPESE-----NLEEF--WANLIGGVDMVTAD-DRRWKAG-LYGLPRRMGKLKDLSRFDASFFGVHSKQANT 74 (2512)
T ss_dssp EEEEEEEEEBTTBS-----SHHHH--HHHHHTTCCCEEEC-SSSSCTT-GGGCCSEEECCSCSSCCCTTTTTCCHHHHHT
T ss_pred EEEEeeeeeCCCCC-----CHHHH--HHHHHcCCccccCC-Ccccccc-cccCcccceecCCcccCCHhhcCCCHHHHHh
Confidence 35788999999754 47788 99999999988764 3466544 4445678899999999999999999999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHHHHhCCCC
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~~ 171 (172)
||||||++|++++|||||||+++..+++.|+|||+|++..+|......++..+.+|.++++..+++++|||+.|||++
T Consensus 75 ~dpq~rl~l~~~~eAle~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~G 152 (2512)
T 2vz8_A 75 MDPQLRMLLEVTYEAIVDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKG 152 (2512)
T ss_dssp SCHHHHHHHHHHHHHHGGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCS
T ss_pred cCHHHHHHHHHHHHHHHHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCC
Confidence 999999999999999999999988889999999999999999887777778889999999999999999999999987
No 3
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.90 E-value=2.3e-24 Score=183.40 Aligned_cols=150 Identities=30% Similarity=0.508 Sum_probs=127.1
Q ss_pred cceEEEeeecCcc-chhhcCCcccccccccccccccccccccCcc-cccCCCCC---------CCCCCcccCCcCCCCcc
Q psy11963 14 RTGVYIGLMTTEA-NDFAEGNPEKLTGYETIGSTRAMLANRLSYA-FNFSGLYG---------APSRTGKIKDIASFDAE 82 (172)
Q Consensus 14 ~~~V~vg~~~~~~-~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~v~~fd~~ 82 (172)
...|+|||.+|.. .+ ++.| |+.|.+|++.+..++..| |+.+.+|+ +++++++++++..||+.
T Consensus 8 iaIvG~~~~~P~g~~~-----~~~~--w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~ 80 (915)
T 2qo3_A 8 IAIVSMACRLPGGVNT-----PQRL--WELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAE 80 (915)
T ss_dssp EEEEEEEEECSTTCCS-----HHHH--HHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHH
T ss_pred EEEEeeEEECCCCCCC-----HHHH--HHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHh
Confidence 5678888999976 43 5678 999999999888888777 77655543 25668999999999999
Q ss_pred ccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhH
Q psy11963 83 FFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANR 162 (172)
Q Consensus 83 ~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 162 (172)
+|+|++++++.|||+++++++++++||+|||++++.+++.++|||+|++..+|.... .....+.++.+++...++++++
T Consensus 81 ~f~i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~a~r 159 (915)
T 2qo3_A 81 FFGVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDT-AAAEDVEGYSVTGVAPAVASGR 159 (915)
T ss_dssp HHTCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTC-C---CTTCHHHHTTCHHHHHHH
T ss_pred hcCCCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhh-cccccccccccccccccHHHHH
Confidence 999999999999999999999999999999999988999999999999888776443 4455678888999999999999
Q ss_pred HHHHhCCCC
Q psy11963 163 LSYAFNFSV 171 (172)
Q Consensus 163 is~~~~l~~ 171 (172)
|++.|||++
T Consensus 160 is~~lgl~G 168 (915)
T 2qo3_A 160 ISYTMGLEG 168 (915)
T ss_dssp HHHHHTBCS
T ss_pred HHHHhCCCC
Confidence 999999986
No 4
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.89 E-value=6.8e-24 Score=180.59 Aligned_cols=149 Identities=26% Similarity=0.449 Sum_probs=127.1
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcc-cccCCCCCCCCCCcccCCcCCCCccccCCCHHHHh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYA-FNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLAN 92 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~ 92 (172)
...|+|||.+|... .+.+.+ |+.|.+|++.+.+++.+| |+.+ ..++++++++++..||+.+|+|++++++
T Consensus 41 iaIvG~~~~~Pgg~----~~~~~~--w~~L~~g~~~i~~~p~~r~~~~~---~~~~~~~~l~~~~~fD~~~f~i~~~ea~ 111 (917)
T 2hg4_A 41 IAIVGMACRFPGDV----DSPESF--WEFVSGGGDAIAEAPADRGWEPD---PDARLGGMLAAAGDFDAGFFGISPREAL 111 (917)
T ss_dssp EEEEEEEEEBTTTB----CSHHHH--HHHHHTTCCCCEECCGGGCCCCC---SSCCEEBCCTTTTEECTGGGTCCHHHHH
T ss_pred EEEEeceEECCCCC----CCHHHH--HHHHHcCCCccccCCcccccCCC---CCcceeeEecCccccChhhcCCCHHHHH
Confidence 46788889998532 235678 999999999998887766 4221 1367899999999999999999999999
Q ss_pred hcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHHHhccCCCCCCccccccchhhHHHhHHHHHhCCCC
Q psy11963 93 VMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 93 ~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~~ 171 (172)
.|||+++++++++++||+|||++++.+++.|+|||+|++..+|.......+..+.++..++...++++++||+.|||++
T Consensus 112 ~mdp~~rl~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~G 190 (917)
T 2hg4_A 112 AMDPQQRIMLEISWEALERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEG 190 (917)
T ss_dssp HSCHHHHHHHHHHHHHHHHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCS
T ss_pred hcCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCC
Confidence 9999999999999999999999988899999999999998888765556667788888888999999999999999986
No 5
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.84 E-value=6.3e-21 Score=150.26 Aligned_cols=143 Identities=20% Similarity=0.217 Sum_probs=119.4
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.+.++++.++.++ +|+.+.. +.+ ...++++||+.+| +++++++.
T Consensus 6 v~ItG~g~~~P~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~---~~~~v~~fd~~~~-i~~~~~~~ 70 (413)
T 3o04_A 6 VVVTGIGAVTPIGND-----AETS--WENAKKGVNGVAKMT--RLNPDDF--PVK---IAAELKDFDVEKY-LEKKEARK 70 (413)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHTTCCCEEECC--SSCGGGS--SCC---EEECCSSCCGGGT-SCHHHHTT
T ss_pred EEEEEeEEECCCCCC-----HHHH--HHHHHcCCCceeeCC--ccccccC--ccc---cccccCCCChhhc-cCHHHHhh
Confidence 457788899998754 5677 999999999987764 4555544 222 2346778999999 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc-------hhHHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT-------TEANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||++++++++.|+||++|++. ..|..+...++..++|+.+++.+.++++++|++.
T Consensus 71 ~d~~~~l~l~Aa~~AL~dAGl~~~~id~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 150 (413)
T 3o04_A 71 MDRFTHYAIASAEMAVQDSGLVIDDSNANRVGVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIR 150 (413)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCChhHcCccceEEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHH
Confidence 999999999999999999999998999999999999763 4566666778888999999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 151 lgl~g 155 (413)
T 3o04_A 151 FGAKG 155 (413)
T ss_dssp HTCCS
T ss_pred hCCCC
Confidence 99985
No 6
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.84 E-value=5.5e-21 Score=151.15 Aligned_cols=146 Identities=17% Similarity=0.269 Sum_probs=120.4
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccC----CcCCCCccccCCCHH
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIK----DIASFDAEFFGIHSK 89 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~fd~~~~~~~~~ 89 (172)
.+..++|+.+|...+ .+.+ |+.|.+|++.++..+ +|+.+++ +++.++.++ ++..||+.+| ++++
T Consensus 12 ~viTG~G~vsp~g~~-----~~~~--w~~L~~G~s~i~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~fd~~~~-i~~~ 79 (428)
T 3kzu_A 12 VVITGLGLVSPLASG-----VEET--WKRLLAGESGARRVT--EFEVDDL--ACQIACRIPVGDGTNGTFNPDLH-MDPK 79 (428)
T ss_dssp EEEEEEEEECSSCBS-----HHHH--HHHHHTTCCCEEECC--SSCCTTS--SCCEEECCCBSSSSTTCBCGGGT-SCHH
T ss_pred eEEEeceEECCCcCC-----HHHH--HHHHHcCCCeeeeCC--ccccccC--cCceeeEecccccccccCChhhc-CCHH
Confidence 467788999998876 5568 999999999988765 4666655 344555554 4558999998 9999
Q ss_pred HHhhcChHHHHHHHHHHHHHHhCCCCCCC-CCCCcceEEEcccc-------hhHHHHhccCCCCCCccccccchhhHHHh
Q psy11963 90 LANVMDPQLRMLLELTHESIMDGGFNPEE-LRGTRTGVYIGLMT-------TEANDFAEGNPEKLTGYETIGSTRAMLAN 161 (172)
Q Consensus 90 ~~~~~d~~~~~~l~aa~eAl~dAG~~~~~-~~~~r~gv~vG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 161 (172)
+++.|||+++++++++++||+|||+++++ +++.++||++|++. ..+..+...++..++|+..+..+.+.+++
T Consensus 80 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~id~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 159 (428)
T 3kzu_A 80 EQRKVDPFIVYAVGAADQALDDAGWHPENDEDQVRTGVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASG 159 (428)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHH
T ss_pred HHHhCCHHHHHHHHHHHHHHHhcCCChhhhccccceEEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHH
Confidence 99999999999999999999999998877 77889999999764 23445556677788999999999999999
Q ss_pred HHHHHhCCCC
Q psy11963 162 RLSYAFNFSV 171 (172)
Q Consensus 162 ~is~~~~l~~ 171 (172)
+|++.||+++
T Consensus 160 ~is~~lgl~G 169 (428)
T 3kzu_A 160 HVSIKHKLRG 169 (428)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHcCCCC
Confidence 9999999985
No 7
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.83 E-value=1.6e-20 Score=148.44 Aligned_cols=146 Identities=18% Similarity=0.262 Sum_probs=120.0
Q ss_pred CCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHH
Q psy11963 11 RGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKL 90 (172)
Q Consensus 11 ~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~ 90 (172)
......+++||.+|...+ .+.+ |+.|.++++.+...+ +|+..++ .++.++. +++||+.+| |++++
T Consensus 17 ~~~v~I~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~---v~~fd~~~~-i~~~~ 81 (427)
T 3ho9_A 17 KRRVVVTGLGMLSPVGNT-----VEST--WKALLAGQSGISLID--HFDTSAY--ATKFAGL---VKDFNCEDI-ISRKE 81 (427)
T ss_dssp CCCEEEEEEEEEBTTBSS-----HHHH--HHHHHTTCCCEEECC--SSCCTTC--SCCEEEC---CSSCCCTTT-SCHHH
T ss_pred CCCEEEEeeeEECCCCCC-----HHHH--HHHHHcCCCceeeCC--ccccccC--ccceeeE---cCCCChhhc-CCHHH
Confidence 344567888899988765 5678 999999999987665 4665554 3444554 567999999 99999
Q ss_pred HhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc-------hhHHHHhccCCCCCCccccccchhhHHHhHH
Q psy11963 91 ANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT-------TEANDFAEGNPEKLTGYETIGSTRAMLANRL 163 (172)
Q Consensus 91 ~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 163 (172)
++.|||+++++++++++||+|||+++++++..++||++|++. ..+..+...++..+.|+.++..+.+.++++|
T Consensus 82 ~~~~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 161 (427)
T 3ho9_A 82 QRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIGAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHL 161 (427)
T ss_dssp HTTSCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHCCCCcccccccceEEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHH
Confidence 999999999999999999999999998899999999999764 2344555667778899999999999999999
Q ss_pred HHHhCCCC
Q psy11963 164 SYAFNFSV 171 (172)
Q Consensus 164 s~~~~l~~ 171 (172)
++.||+++
T Consensus 162 s~~lgl~G 169 (427)
T 3ho9_A 162 TIMYGLRG 169 (427)
T ss_dssp HHHHTCCS
T ss_pred HHHhCCCC
Confidence 99999986
No 8
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.81 E-value=2.4e-20 Score=148.42 Aligned_cols=148 Identities=16% Similarity=0.140 Sum_probs=121.4
Q ss_pred CCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCC-----cCCCCccccCC
Q psy11963 12 GTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKD-----IASFDAEFFGI 86 (172)
Q Consensus 12 ~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~fd~~~~~~ 86 (172)
.....+++||.+|...+ .+.+ |+.|.++++.++..+ +|+..+. +.+.+|++++ +.+||+.+| +
T Consensus 24 ~~v~ItG~g~~~P~g~~-----~~~~--w~~l~~g~s~i~~~~--~~~~~~~--~~~~~g~v~~~~~~~~~~fd~~~~-i 91 (451)
T 4ddo_A 24 LRVVVTGIGIVSPLGCG-----KELV--WQRLIGGGSGLRRLG--DDIAGEL--SAKVGGTVQDVAEDPEGGFDPERS-V 91 (451)
T ss_dssp CCEEEEEEEEEETTEES-----HHHH--HHHHHTTCCCEEECC--HHHHTTS--SCCEEECCCCTTTCTTTCCCGGGT-S
T ss_pred CCEEEEEeEEECCCCCC-----HHHH--HHHHHcCCCeeeeCC--ccccccc--cCccceEccccccccccccchhhh-C
Confidence 34568888999998765 5678 999999999887665 4655555 3456677764 348999999 9
Q ss_pred CHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCC-CCCcceEEEcccc-------hhHHHHhccCCCCCCccccccchhhH
Q psy11963 87 HSKLANVMDPQLRMLLELTHESIMDGGFNPEEL-RGTRTGVYIGLMT-------TEANDFAEGNPEKLTGYETIGSTRAM 158 (172)
Q Consensus 87 ~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~-~~~r~gv~vG~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (172)
++++++.|||+++++++++++||+|||++++++ +..|+||++|++. ..+..+...++..++++.++..+.+.
T Consensus 92 ~~~~~~~~d~~~~L~l~Aa~~AL~dAGl~~~~i~d~~~~gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (451)
T 4ddo_A 92 PHKELRKMDRFIQMAMVAADEALAEAGWAPEAEQQRERTATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNL 171 (451)
T ss_dssp CHHHHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHTTEEEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTH
T ss_pred CHHHHhhCCHHHHHHHHHHHHHHHHcCCChhhcccccceEEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccch
Confidence 999999999999999999999999999998888 8889999999764 23444555667788999999999999
Q ss_pred HHhHHHHHhCCCC
Q psy11963 159 LANRLSYAFNFSV 171 (172)
Q Consensus 159 ~a~~is~~~~l~~ 171 (172)
++++|++.||+++
T Consensus 172 ~a~~ia~~lgl~G 184 (451)
T 4ddo_A 172 AAGQISIKHRFRG 184 (451)
T ss_dssp HHHHHHHHHTCCS
T ss_pred HHHHHHHHhcCCC
Confidence 9999999999975
No 9
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.81 E-value=6.1e-20 Score=145.07 Aligned_cols=143 Identities=16% Similarity=0.214 Sum_probs=113.2
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.|.++++.+...+ +|+...+ .++.++. + +||+.+|++++++++.
T Consensus 5 vaI~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~---~-~fd~~~~~i~~~~~~~ 69 (424)
T 1tqy_A 5 VVITGVGVRAPGGNG-----TRQF--WELLTSGRTATRRIS--FFDPSPY--RSQVAAE---A-DFDPVAEGFGPRELDR 69 (424)
T ss_dssp EEEEEEEEEETTEES-----HHHH--HHHHHHTCCCEEECC--SSCCTTS--SCCEEEC---C-CCCHHHHTCCHHHHHH
T ss_pred EEEEeeEEECCCCCC-----HHHH--HHHHHcCCCceeeCC--CcccccC--CcceeEE---e-ccCHhhcCCCHHHHHh
Confidence 467888999998765 5678 999999999887654 4554444 2333443 3 7999999999999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHHH-------Hh--ccCCCCCCccccccchhhHHHh---
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEAND-------FA--EGNPEKLTGYETIGSTRAMLAN--- 161 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~a~--- 161 (172)
|||+++++++++++||+|||++++.+++.|+||++|+...+|.. +. ..+...++++..+..+++.+++
T Consensus 70 ~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 149 (424)
T 1tqy_A 70 MDRASQFAVACAREAFAASGLDPDTLDPARVGVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMP 149 (424)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCTTTCCGGGEEEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHH
T ss_pred cCHHHHHHHHHHHHHHHHCCCCchhcCCCceEEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhH
Confidence 99999999999999999999998888899999999987655432 22 3456677888877777776666
Q ss_pred -HHHHHhCCCC
Q psy11963 162 -RLSYAFNFSV 171 (172)
Q Consensus 162 -~is~~~~l~~ 171 (172)
+|++.||+++
T Consensus 150 ~~ia~~lgl~g 160 (424)
T 1tqy_A 150 AEVAWAVGAEG 160 (424)
T ss_dssp HHHHHHHTCCS
T ss_pred hHHHHhcCCCC
Confidence 9999999985
No 10
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.80 E-value=8.3e-20 Score=144.00 Aligned_cols=143 Identities=18% Similarity=0.182 Sum_probs=115.8
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.+.++++.+...+ +|+..+. +++.++. +++||+.++ +++++++.
T Consensus 9 v~I~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~---i~~fd~~~~-~~~~~~~~ 73 (416)
T 1e5m_A 9 VVVTGLGAITPIGNT-----LQDY--WQGLMEGRNGIGPIT--RFDASDQ--ACRFGGE---VKDFDATQF-LDRKEAKR 73 (416)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHTTCCCEEECC--SSCCTTS--SCCEEEC---CCSCCGGGT-SCHHHHHT
T ss_pred EEEEeeeEECCCCCC-----HHHH--HHHHHcCCCeEeeCC--ccccccC--ccceeEE---eCCCCcccc-CCHHHHHh
Confidence 467788899998754 5677 999999999887654 4655444 3344454 456999875 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||++++.+++.|+||++|+...+ |..+...++..++|+.+++.+++.++++|++.
T Consensus 74 ~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 153 (416)
T 1e5m_A 74 MDRFCHFAVCASQQAINDAKLVINELNADEIGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAIN 153 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHH
Confidence 99999999999999999999998888889999999976543 44444566777899999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 154 lgl~g 158 (416)
T 1e5m_A 154 LGAKG 158 (416)
T ss_dssp HTCCS
T ss_pred hCCCC
Confidence 99975
No 11
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.80 E-value=3.2e-20 Score=147.21 Aligned_cols=147 Identities=16% Similarity=0.200 Sum_probs=118.4
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCC---cCCCCccccCCCHH
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKD---IASFDAEFFGIHSK 89 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~fd~~~~~~~~~ 89 (172)
....++|||.+|...+ .+.+ |+.|.++++.+...+ +|+.... +++.++++++ +..||+.+| ++++
T Consensus 22 ~v~ItG~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~~~~~~~~~~fd~~~~-~~~~ 89 (438)
T 2iwz_A 22 RVVITGIGLVTPLGVG-----THLV--WDRLIGGESGIVSLV--GEEYKSI--PCSVAAYVPRGSDEGQFNEQNF-VSKS 89 (438)
T ss_dssp CEEEEEEEEEETTEES-----HHHH--HHHHHTTCCCEEECC--SGGGTTS--SCCEEECCCBSSSTTSBCGGGT-SCHH
T ss_pred CEEEEeeeEECCCCCC-----HHHH--HHHHHcCCCccccCC--chhcccC--ccceeeeeccccccccCChhhc-CCHH
Confidence 3467888899987755 5678 999999999987765 3554444 4556777765 456999988 9999
Q ss_pred HHhhcChHHHHHHHHHHHHHHhCCCCC-CCCCCCcceEEEcccchhH-------HHHhccCCCCCCccccccchhhHHHh
Q psy11963 90 LANVMDPQLRMLLELTHESIMDGGFNP-EELRGTRTGVYIGLMTTEA-------NDFAEGNPEKLTGYETIGSTRAMLAN 161 (172)
Q Consensus 90 ~~~~~d~~~~~~l~aa~eAl~dAG~~~-~~~~~~r~gv~vG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~ 161 (172)
+++.|||+++++++++++||+|||+++ +.+++.++||++|+...++ ..+...++..++|+.+++.+++.+++
T Consensus 90 ~~~~~d~~~~l~l~aa~~AL~dAGl~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~ 169 (438)
T 2iwz_A 90 DIKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAG 169 (438)
T ss_dssp HHTTSCHHHHHHHHHHHHHHHHHTCCCCSHHHHHTEEEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHcCCCCcccccCcceEEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHH
Confidence 999999999999999999999999987 6777779999999765443 33344566778899998999999999
Q ss_pred HHHHHhCCCC
Q psy11963 162 RLSYAFNFSV 171 (172)
Q Consensus 162 ~is~~~~l~~ 171 (172)
+|++.||+++
T Consensus 170 ~ia~~lgl~g 179 (438)
T 2iwz_A 170 QVSIRYKLKG 179 (438)
T ss_dssp HHHHHHTCCS
T ss_pred HHHHHhCCCC
Confidence 9999999985
No 12
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.79 E-value=1.1e-19 Score=144.05 Aligned_cols=143 Identities=16% Similarity=0.179 Sum_probs=115.5
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.+.++++.+...+ +|+.... +++.+++ +++||+.++ +++++++.
T Consensus 30 vaI~G~g~~~P~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~---i~~fd~~~~-~~~~~~~~ 94 (437)
T 2gqd_A 30 VVITGMGALSPIGND-----VKTT--WENALKGVNGIDKIT--RIDTEPY--SVHLAGE---LKNFNIEDH-IDKKEARR 94 (437)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHTTCCCEEECC--SSCCTTS--SCCEEEC---CSSCCGGGT-SCSTTTTT
T ss_pred EEEEEeeEECCCCCC-----HHHH--HHHHHcCCCceeeCC--ccccccC--ccceeEE---eCCCChhcC-CCHHHHHh
Confidence 467888899998755 5677 999999999887654 4555444 3344554 456998774 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||++++++++.|+||++|+...+ |..+...++..++|+.+++.+++.++++|++.
T Consensus 95 ~d~~~~l~l~aa~~AL~dAGl~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~ 174 (437)
T 2gqd_A 95 MDRFTQYAIVAAREAVKDAQLDINENTADRIGVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSID 174 (437)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCCCTTTGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccCCcceEEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHH
Confidence 99999999999999999999998888889999999976543 44445566778889999888999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 175 lgl~g 179 (437)
T 2gqd_A 175 LGAKG 179 (437)
T ss_dssp HTCCS
T ss_pred hCCCC
Confidence 99985
No 13
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.79 E-value=3.3e-19 Score=140.40 Aligned_cols=143 Identities=13% Similarity=0.142 Sum_probs=116.3
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccC-CCCCCCCCCcccCCcCCCCccccCCCHHHHh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFS-GLYGAPSRTGKIKDIASFDAEFFGIHSKLAN 92 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~ 92 (172)
...+++||.+|...+ .+.+ |+.+.++++.+...+. |+.. +. +++.++ ++++||+.+| +++++++
T Consensus 8 v~ItG~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~~--~~~~~~~--~~~~~~---~v~~fd~~~~-i~~~~~~ 72 (412)
T 4ewg_A 8 VVITGMGGVTALGSR-----WDEI--EAALKAGRNAVRRMPD--WDYFESL--HTRLAA---PLPGFAQPAD-WPRKKTR 72 (412)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHHTCCCCEECGG--GGGSSSC--CCCEEB---CCSCCCCCTT-SCHHHHT
T ss_pred EEEEeeEEECCCcCC-----HHHH--HHHHHcCCCceeeCCc--cccccCC--ccceee---ecCCCChhhh-CCHHHHh
Confidence 457788899888654 5678 9999999999887664 4433 23 233344 4667999998 9999999
Q ss_pred hcChHHHHHHHHHHHHHHhCCC-CCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHH
Q psy11963 93 VMDPQLRMLLELTHESIMDGGF-NPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLS 164 (172)
Q Consensus 93 ~~d~~~~~~l~aa~eAl~dAG~-~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 164 (172)
.|||+++++++++++||+|||+ +++.+++.++||++|++... +..+...++..++++.++..+.+.++++|+
T Consensus 73 ~~d~~~~l~l~aa~~Al~dAGl~~~~~i~~~~~gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia 152 (412)
T 4ewg_A 73 SMGRVSMYAVRASELALADAGFAGDESISDGRMGVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVS 152 (412)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTCTTCGGGGTTTEEEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhcCCCCccccCccceEEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHH
Confidence 9999999999999999999999 67778889999999976532 444566778889999999999999999999
Q ss_pred HHhCCCC
Q psy11963 165 YAFNFSV 171 (172)
Q Consensus 165 ~~~~l~~ 171 (172)
+.||+++
T Consensus 153 ~~lgl~g 159 (412)
T 4ewg_A 153 LFWDLKG 159 (412)
T ss_dssp HHTTCCS
T ss_pred HHhCCCC
Confidence 9999986
No 14
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.79 E-value=2.3e-19 Score=141.47 Aligned_cols=141 Identities=15% Similarity=0.029 Sum_probs=113.6
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccc--cCCCCCCCCCCcccCCcCCCCccccCCCHHH
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFN--FSGLYGAPSRTGKIKDIASFDAEFFGIHSKL 90 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~ 90 (172)
....+++||.+|...+ .+.+ |+.|.+|++.+...+ +|+ ..+. +++.++++++ |+.+| +++++
T Consensus 13 ~vaI~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~~~--~~~~~~~~~~----d~~~~-~~~~~ 76 (416)
T 2wge_A 13 SVVVTAVTATTSISPD-----IEST--WKGLLAGESGIHALE--DEFVTKWDL--AVKIGGHLKD----PVDSH-MGRLD 76 (416)
T ss_dssp CEEEEEEEEEESSCSS-----HHHH--HHHHHTTCCCCEECC--CHHHHHHTC--SCCEEBCCSS----CGGGG-CCHHH
T ss_pred cEEEEeeEEECCCCCC-----HHHH--HHHHHcCCCEEEeCC--ccccccccC--CccEEEEeCC----chhhh-CCHHH
Confidence 3467888899988755 6678 999999999987765 354 2233 4456777654 77788 99999
Q ss_pred HhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHH
Q psy11963 91 ANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRL 163 (172)
Q Consensus 91 ~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~i 163 (172)
++.|||+++++++++++||+|||+ +.+++.|+||++|++..+ |..+...++..+.|+.+++.+.+.++++|
T Consensus 77 ~~~~d~~~~l~l~aa~~AL~dAG~--~~~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 154 (416)
T 2wge_A 77 MRRMSYVQRMGKLLGGQLWESAGS--PEVDPDRFAVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVI 154 (416)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHTTC--CCCCGGGEEEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHH
T ss_pred HHhcCHHHHHHHHHHHHHHHHcCC--CccCCCceEEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHH
Confidence 999999999999999999999999 566788999999977543 33445567778899999999999999999
Q ss_pred HHHhCCCC
Q psy11963 164 SYAFNFSV 171 (172)
Q Consensus 164 s~~~~l~~ 171 (172)
++.||+++
T Consensus 155 a~~lgl~g 162 (416)
T 2wge_A 155 GLQLGARA 162 (416)
T ss_dssp HHHHTCCS
T ss_pred HHHhccCC
Confidence 99999975
No 15
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.79 E-value=9e-20 Score=143.73 Aligned_cols=144 Identities=18% Similarity=0.218 Sum_probs=117.9
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHh
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLAN 92 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~ 92 (172)
....+++||.+|...+ .+.+ |+.|.++++.+...+ +|+..++ +++.++++ ++||+.+| +++++++
T Consensus 10 ~v~I~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~v---~~fd~~~~-~~~~~~~ 74 (415)
T 1tqy_B 10 SVLITGVGVVAPNGLG-----LAPY--WSAVLDGRHGLGPVT--RFDVSRY--PATLAGQI---DDFHAPDH-IPGRLLP 74 (415)
T ss_dssp CEEEEEEEEEETTEES-----HHHH--HHHHHTTCCCEEECT--TTTGGGS--SCCEEECC---CSCCHHHH-SCTTTGG
T ss_pred CEEEEeeEEECCCCCC-----HHHH--HHHHHcCCCcEEECC--cccccCC--CcceEEEe---CCCCchhc-CCHHHHH
Confidence 3467888899988765 5677 999999999887664 4655544 34455554 46999888 9999999
Q ss_pred hcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhH-------HHHhccCCCCCCccccccchhhHHHhHHHH
Q psy11963 93 VMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEA-------NDFAEGNPEKLTGYETIGSTRAMLANRLSY 165 (172)
Q Consensus 93 ~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~is~ 165 (172)
.|||+++++++++++||+|||++++++++.++||++|++..++ ..+...++..++|+.+++...+.++++|++
T Consensus 75 ~~d~~~~l~l~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~ 154 (415)
T 1tqy_B 75 QTDPSTRLALTAADWALQDAKADPESLTDYDMGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISI 154 (415)
T ss_dssp GCCHHHHHHHHHHHHHHHHTTCCGGGSCGGGEEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHH
Confidence 9999999999999999999999988888899999999875443 344556777889999999999999999999
Q ss_pred HhCCCC
Q psy11963 166 AFNFSV 171 (172)
Q Consensus 166 ~~~l~~ 171 (172)
.||+++
T Consensus 155 ~lgl~g 160 (415)
T 1tqy_B 155 RHGMRG 160 (415)
T ss_dssp HHTCCS
T ss_pred HhCCCC
Confidence 999975
No 16
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.78 E-value=1.7e-19 Score=142.72 Aligned_cols=143 Identities=15% Similarity=0.211 Sum_probs=116.0
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.+.++++.+...+ +|+..+. +++.++. +++||+.+| +++++++.
T Consensus 25 v~ItG~g~~~P~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~---v~~fd~~~~-~~~~~~~~ 89 (430)
T 1ox0_A 25 VVVTGYGVTSPIGNT-----PEEF--WNSLATGKIGIGGIT--KFDHSDF--DVHNAAE---IQDFPFDKY-FVKKDTNR 89 (430)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHHTCCCEEECC--SSCCTTS--SCCEEEC---CSSCCHHHH-CCGGGGGT
T ss_pred EEEEEEEEECCCcCC-----HHHH--HHHHHcCCCeeeeCC--cccccCC--ccceeee---ccCCChhhc-CCHHHHHh
Confidence 357788888888754 5677 999999999887765 4555444 3344444 457999887 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||++++.+++.++||++|++..+ +..+...++..++|+.+++.+++.++++|++.
T Consensus 90 ~d~~~~l~l~aa~~AL~dAG~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 169 (430)
T 1ox0_A 90 FDNYSLYALYAAQEAVNHANLDVEALNRDRFGVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMR 169 (430)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCCTTTSCGGGEEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCChhhcCccceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHH
Confidence 99999999999999999999998888889999999976543 33344567778899999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 170 lgl~G 174 (430)
T 1ox0_A 170 FGANG 174 (430)
T ss_dssp HTCCS
T ss_pred hcCCC
Confidence 99985
No 17
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.78 E-value=2.2e-19 Score=141.20 Aligned_cols=142 Identities=16% Similarity=0.232 Sum_probs=116.2
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.+.+|++.+...+ +|+..++ +++.++++ +||+.+| +++++++.
T Consensus 4 v~I~G~g~~~p~g~~-----~~~~--w~~l~~g~~~~~~~~--~~~~~~~--~~~~~~~~----~fd~~~~-~~~~~~~~ 67 (408)
T 1j3n_A 4 VVVTGLGALTPIGVG-----QEAF--HKAQLAGKSGVRPIT--RFDASAL--PVRIAAEV----DVDPGAY-LDRKELRR 67 (408)
T ss_dssp EEEEEEEEEETTEES-----HHHH--HHHHHHTCCCEEECC--SSCCTTS--SCCEEECC----CCCGGGT-SCHHHHTT
T ss_pred EEEEEeEEECCCCCC-----HHHH--HHHHHcCCCeeeecc--ccCcccC--ccceEEEE----ccChhhc-CCHHHHHh
Confidence 357888999998765 5677 999999999887654 4655544 34455554 6999887 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhH-------HHHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEA-------NDFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||++++.++..++||++|++..+| ..+...++..++|+.+++.+++.++++|++.
T Consensus 68 ~d~~~~l~~~aa~~AL~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (408)
T 1j3n_A 68 LDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMR 147 (408)
T ss_dssp SCHHHHHHHHHHHHHHHHHTCCGGGSCGGGEEEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHcCCCccccCCCceEEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHH
Confidence 999999999999999999999988888899999999775443 3344566778899999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 148 lgl~g 152 (408)
T 1j3n_A 148 YGFTG 152 (408)
T ss_dssp HTCCS
T ss_pred hCCCC
Confidence 99975
No 18
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.78 E-value=5e-19 Score=140.13 Aligned_cols=141 Identities=14% Similarity=0.028 Sum_probs=113.2
Q ss_pred CcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccc--cCCCCCCCCCCcccCCcCCCCccccCCCHHH
Q psy11963 13 TRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFN--FSGLYGAPSRTGKIKDIASFDAEFFGIHSKL 90 (172)
Q Consensus 13 ~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~ 90 (172)
....+++||.+|...+ .+.+ |+.|.++++.+...+ +|+ ..+. +++.++++++ |+.+| +++++
T Consensus 29 ~vaI~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~~~--~~~~~~~v~~----d~~~~-~~~~~ 92 (434)
T 2gp6_A 29 YVVVTGIAMTTALATD-----AETT--WKLLLDRQSGIRTLD--DPFVEEFDL--PVRIGGHLLE----EFDHQ-LTRIE 92 (434)
T ss_dssp CEEEEEEEEECSSCSS-----HHHH--HHHHHTTCCCEEECC--CHHHHHHCC--SCCEEECCSC----CSTTS-SCHHH
T ss_pred CEEEEeeEEeCCCCCC-----HHHH--HHHHHcCCCeeeeCC--ccccccccC--ccceeEEcCC----chhhh-CCHHH
Confidence 3467888899988765 5678 999999999988765 354 2333 3456676654 66777 99999
Q ss_pred HhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhH-------HHHhccCCCCCCccccccchhhHHHhHH
Q psy11963 91 ANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEA-------NDFAEGNPEKLTGYETIGSTRAMLANRL 163 (172)
Q Consensus 91 ~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~a~~i 163 (172)
++.|||+++++++++++||+|||+ +.+++.++||++|++..+| ..+...++..++|+.+++.+++.++++|
T Consensus 93 ~~~~d~~~~l~l~aa~~ALedAG~--~~~~~~~igv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i 170 (434)
T 2gp6_A 93 LRRMGYLQRMSTVLSRRLWENAGS--PEVDTNRLMVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAV 170 (434)
T ss_dssp HHTCCHHHHHHHHHHHHHHHHTTC--CCCCTTSEEEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHH
T ss_pred HHhCCHHHHHHHHHHHHHHHhcCC--CccCCCceEEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHH
Confidence 999999999999999999999999 4567889999999775443 3344567778899999999999999999
Q ss_pred HHHhCCCC
Q psy11963 164 SYAFNFSV 171 (172)
Q Consensus 164 s~~~~l~~ 171 (172)
++.||+++
T Consensus 171 s~~lgl~G 178 (434)
T 2gp6_A 171 GLERHAKA 178 (434)
T ss_dssp HHHSCCCS
T ss_pred hhhhcCCC
Confidence 99999975
No 19
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.77 E-value=9.3e-20 Score=143.28 Aligned_cols=142 Identities=15% Similarity=0.225 Sum_probs=112.1
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.|.++++.+...+ +|+..++ +.+.++.+ + ||+.+| +++++++.
T Consensus 4 v~ItG~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~--~~~~~~~v---~-fd~~~~-~~~~~~~~ 67 (406)
T 2vba_A 4 AVITGLGIVSSIGNN-----QQEV--LASLREGRSGITFSQ--ELKDSGM--RSHVWGNV---K-LDTTGL-IDRKVVRF 67 (406)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHHTCCCEEECH--HHHHTTC--SCCEEECC---C-CCCTTS-SCHHHHTT
T ss_pred EEEEeeEEECCCCCC-----HHHH--HHHHHcCCCeEEeCC--cccccCC--ccceEEEe---c-CChhhc-CCHHHHHh
Confidence 356788899987755 5678 999999999887665 4554444 33344544 4 999988 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCC-CcceEEEcccchhHH-------HHh-ccCCCCCCccccccchhhHHHhHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRG-TRTGVYIGLMTTEAN-------DFA-EGNPEKLTGYETIGSTRAMLANRLS 164 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~-~r~gv~vG~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~a~~is 164 (172)
|||+++++++++++||+|||++++.++. .|+||++|+...++. .+. ..++..++|+.+++.+.+.++++|+
T Consensus 68 ~d~~~~l~l~aa~~Al~dAg~~~~~i~~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is 147 (406)
T 2vba_A 68 MSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLA 147 (406)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCHHHHTTCTTEEEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHCCCChhHcCCCCCEEEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHH
Confidence 9999999999999999999998777777 899999998765442 222 2344557788888889999999999
Q ss_pred HHhCCCC
Q psy11963 165 YAFNFSV 171 (172)
Q Consensus 165 ~~~~l~~ 171 (172)
+.||+++
T Consensus 148 ~~lgl~G 154 (406)
T 2vba_A 148 TPFKIHG 154 (406)
T ss_dssp TTTTCCS
T ss_pred HhccCCC
Confidence 9999986
No 20
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.76 E-value=2e-19 Score=142.36 Aligned_cols=144 Identities=16% Similarity=0.177 Sum_probs=113.6
Q ss_pred ceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccC--CC----------CCCCCCCcccC---CcCCC
Q psy11963 15 TGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFS--GL----------YGAPSRTGKIK---DIASF 79 (172)
Q Consensus 15 ~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~--~~----------~~~~~~~~~~~---~v~~f 79 (172)
..+++||.+|...+ .+.+ |+.|.+|++.+...+ +|+.. .+ ..+++.+++++ ++.+|
T Consensus 4 aI~G~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~f 74 (431)
T 2ix4_A 4 VVTGLGMVTPLGRG-----VETT--WRRLIDGECGIRGLT--LDDLKMKSFDEETKLYTFDQLSSKVAAFVPYGSNPGEF 74 (431)
T ss_dssp EEEEEEEEETTEES-----HHHH--HHHHHTTCCCEEECC--GGGGCCTTSCHHHHHHHHHTCSCCEEECCCBSSSTTSB
T ss_pred EEEeeeEECCCCCC-----HHHH--HHHHHcCCCeeeeCC--hhhhhccccccccccccccCcccceeEEeccccccccC
Confidence 56888999998865 5678 999999999887765 34421 11 01345677776 56789
Q ss_pred CccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCC-CCCCCCCCcceEEEcccchh-------HHHHhccCCCCCCcccc
Q psy11963 80 DAEFFGIHSKLANVMDPQLRMLLELTHESIMDGGF-NPEELRGTRTGVYIGLMTTE-------ANDFAEGNPEKLTGYET 151 (172)
Q Consensus 80 d~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~-~~~~~~~~r~gv~vG~~~~~-------~~~~~~~~~~~~~~~~~ 151 (172)
|+.+| ++++ .|||+++++++++++||+|||+ +++.+++.|+||++|++... |..+...+++.++|+.+
T Consensus 75 d~~~~-~~~~---~~d~~~~l~l~aa~~AL~dAG~~~~~~i~~~~~gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 150 (431)
T 2ix4_A 75 DEALW-LNSK---AVANFIGYAVCAADEALRDAEWLPTEEEEKERTGVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFI 150 (431)
T ss_dssp CHHHH-SCST---TCCHHHHHHHHHHHHHHHHTTCCCCSHHHHHTEEEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHH
T ss_pred Chhhc-CChh---hCCHHHHHHHHHHHHHHHHcCCCCccccCCCCEEEEEeeccccHHHHHHHHHHHHhcCcccCChhhh
Confidence 99887 7776 8999999999999999999999 87777778999999976443 34444566677889999
Q ss_pred ccchhhHHHhHHHHHhCCCC
Q psy11963 152 IGSTRAMLANRLSYAFNFSV 171 (172)
Q Consensus 152 ~~~~~~~~a~~is~~~~l~~ 171 (172)
++.+.+.++++|++.||+++
T Consensus 151 ~~~~~~~~a~~ia~~lgl~g 170 (431)
T 2ix4_A 151 PKILVNMASGHVSMKYGFQG 170 (431)
T ss_dssp HHHCTTHHHHHHHHHHTCCS
T ss_pred hcchhHHHHHHHHHHHCCCC
Confidence 98899999999999999985
No 21
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.74 E-value=5e-19 Score=139.96 Aligned_cols=142 Identities=13% Similarity=0.208 Sum_probs=115.4
Q ss_pred cceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhh
Q psy11963 14 RTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANV 93 (172)
Q Consensus 14 ~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~ 93 (172)
...+++||.+|...+ .+.+ |+.+.++++.+...+. |+..+. +.+.+|. .+||+.+| +++++++.
T Consensus 25 V~ItG~g~~~p~g~~-----~~~~--w~~l~~g~~~i~~~~~--~~~~~~--~~~~~g~----~~fd~~~~-i~~~~~~~ 88 (428)
T 3mqd_A 25 VVVTGMGIVSSIGSN-----TEEV--TASLREAKSGISRAEE--YAELGF--RCQVHGA----PDIDIESL-VDRRAMRF 88 (428)
T ss_dssp EEEEEEEEEBTTBSS-----HHHH--HHHHHHTCCCEEECHH--HHHTTC--SCCEEEC----CCCCHHHH-SCTGGGTT
T ss_pred EEEEeeEEECCCcCC-----HHHH--HHHHHcCCCcceeCCc--ccccCC--Ccccccc----cCCChhhc-CCHHHHhh
Confidence 457788899888754 6678 9999999999877653 444444 2334444 26999999 99999999
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchhHH-------HHhccCCCCCCccccccchhhHHHhHHHHH
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTEAN-------DFAEGNPEKLTGYETIGSTRAMLANRLSYA 166 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~a~~is~~ 166 (172)
|||+++++++++++||+|||++++.++..++||++|++..++. .+...++..++++.+++.+.+.++++|++.
T Consensus 89 ~d~~~~l~~~aa~~Al~dAGl~~~~i~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 168 (428)
T 3mqd_A 89 HGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATF 168 (428)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCHHHHSSTTEEEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCChhHccccceEEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHH
Confidence 9999999999999999999999888889999999997754433 334466778899999999999999999999
Q ss_pred hCCCC
Q psy11963 167 FNFSV 171 (172)
Q Consensus 167 ~~l~~ 171 (172)
||+++
T Consensus 169 lgl~g 173 (428)
T 3mqd_A 169 FKIKG 173 (428)
T ss_dssp TTCCS
T ss_pred cCCCC
Confidence 99975
No 22
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.54 E-value=7.7e-15 Score=130.52 Aligned_cols=128 Identities=14% Similarity=0.180 Sum_probs=99.7
Q ss_pred CCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhcChHHHHHHHHHHHHHHh
Q psy11963 32 GNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVMDPQLRMLLELTHESIMD 111 (172)
Q Consensus 32 ~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~d 111 (172)
.+++.+ |..+..|++.+.+... .+ +...+|+++ .+||+.+|+|++++++.|||+++++|++++|||+|
T Consensus 1133 ~~~~~~--w~~L~~G~~~i~p~~~------~~--~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~~ 1200 (1878)
T 2uv9_A 1133 PETGQY--TVRLRKGATLLIPKAL------QF--DRLVAGQIP--TGWDARRYGVPEDIIQQVDPVTLYVLVSVAEALLS 1200 (1878)
T ss_dssp TTTSCE--EEEECTTCEEEEEEEE------CC--SCCEEEECC--TTCCHHHHTCCHHHHHHSCHHHHHHHHHHHHHHHT
T ss_pred CChHHH--HHHHHcCCCeeeecCC------CC--cceEEEEeC--CCCCHhhcCCCHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 345677 9999999998865321 12 345678876 37999999999999999999999999999999999
Q ss_pred CCCC-CCC----CCCCcceEEEcccchhHHHH---hcc--CCCCCCccccccchhhHHHhHHHH-HhCCCC
Q psy11963 112 GGFN-PEE----LRGTRTGVYIGLMTTEANDF---AEG--NPEKLTGYETIGSTRAMLANRLSY-AFNFSV 171 (172)
Q Consensus 112 AG~~-~~~----~~~~r~gv~vG~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~a~~is~-~~~l~~ 171 (172)
|||+ +.. +...++||++|++...+..+ ... ....+.++.+..++.|.++++|++ .|++++
T Consensus 1201 AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~vs~~~lg~~G 1271 (1878)
T 2uv9_A 1201 SGITDPYEFYKYVHLSEVGNCIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTG 1271 (1878)
T ss_dssp TTCSSGGGHHHHSCGGGEEEEEEESSCCHHHHHHHHTTTTTTCCCCSCTTGGGSHHHHHHHHHHHTCCCCC
T ss_pred CCCCChhhhhcccCccceEEEEccCCccHHHHHHHHHHHHhcCCCCchhhhcchHHHHHHHHHHHhcCCCC
Confidence 9997 555 67889999999876653321 110 112367788888999999999999 599876
No 23
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.50 E-value=6.3e-15 Score=128.35 Aligned_cols=127 Identities=13% Similarity=0.163 Sum_probs=98.1
Q ss_pred CcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhcChHHHHHHHHHHHHHHhC
Q psy11963 33 NPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVMDPQLRMLLELTHESIMDG 112 (172)
Q Consensus 33 ~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dA 112 (172)
+++.+ |..+..|++.+.+... .+ +.+.+|+++ .+||+.+|+|++++++.|||++++++++++|||+||
T Consensus 960 ~~eef--W~~L~~G~~~i~p~~~------~~--~~~vaG~Ip--~gFD~~~fGIs~~ea~~mDP~qrLaLeAa~EALedA 1027 (1688)
T 2pff_A 960 ETGEY--SVKLLKGATLYIPKAL------RF--DRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIAS 1027 (1688)
T ss_dssp CCCSS--SCCCCCCTTCCCCCCC------CE--ECCSSCSCC--CCCCCCCSSCCTTTBTTBCSSTTHHHHHHHHHHTTT
T ss_pred CHHHH--HHHHHcCCCEEecCCC------CC--CceEEEEEC--CCCChhhCCCCHHHHhccCHHHHHHHHHHHHHHHHc
Confidence 45677 9999999998865321 12 245678876 379999999999999999999999999999999999
Q ss_pred CCC-CCC----CCCCcceEEEcccchhHH---HHhcc--CCCCCCccccccchhhHHHhHHHH-HhCCCC
Q psy11963 113 GFN-PEE----LRGTRTGVYIGLMTTEAN---DFAEG--NPEKLTGYETIGSTRAMLANRLSY-AFNFSV 171 (172)
Q Consensus 113 G~~-~~~----~~~~r~gv~vG~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~a~~is~-~~~l~~ 171 (172)
|++ +.+ +++.++||++|++...+. ..... ....+.++.+...+.|.++++|++ .||+++
T Consensus 1028 GI~dP~ei~~~i~~s~vGV~vGSg~Gg~~~l~~~~~~~~~~~~v~~~~l~~~~~nt~Aa~Vs~~~LGl~G 1097 (1688)
T 2pff_A 1028 GITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSG 1097 (1688)
T ss_dssp TCSSGGGGGGGTCCSCSCCCCCCCSCCCSSHHHHHHSSSSCCCCCSTTHHHHCTHHHHHHHHHSSCCCCC
T ss_pred CCCChHHhccccCCceEEEEecccCCCHHHHHHHHHHHHhcCCCCcchhccccHHHHHHHHHHHHcCCcC
Confidence 997 544 678899999997755422 11111 112366777888889999999999 799875
No 24
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.50 E-value=2.4e-14 Score=127.59 Aligned_cols=128 Identities=13% Similarity=0.158 Sum_probs=99.0
Q ss_pred CCcccccccccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhcChHHHHHHHHHHHHHHh
Q psy11963 32 GNPEKLTGYETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVMDPQLRMLLELTHESIMD 111 (172)
Q Consensus 32 ~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~d 111 (172)
.+++.+ |..+..|++.+.+... .+ +.+.+|+++ .+||+.+|+|++++++.|||+++++|++++|||+|
T Consensus 1158 ~~~~~~--w~~L~~G~~~i~p~~~------~~--~~~~aG~i~--~~FD~~~fgI~~~ea~~mDp~~~l~L~aa~eAL~d 1225 (1887)
T 2uv8_A 1158 PETGEY--SVKLLKGATLYIPKAL------RF--DRLVAGQIP--TGWNAKTYGISDDIISQVDPITLFVLVSVVEAFIA 1225 (1887)
T ss_dssp TTTSCE--EEEECTTCEEEEEEEE------CC--SCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CchHHH--HHHHHcCCceeecccC------CC--CccEEEEEC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 345678 9999999998866432 22 244677775 37999999999999999999999999999999999
Q ss_pred CCCC-CCC----CCCCcceEEEcccchhHHHH---hcc--CCCCCCccccccchhhHHHhHHHHH-hCCCC
Q psy11963 112 GGFN-PEE----LRGTRTGVYIGLMTTEANDF---AEG--NPEKLTGYETIGSTRAMLANRLSYA-FNFSV 171 (172)
Q Consensus 112 AG~~-~~~----~~~~r~gv~vG~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~a~~is~~-~~l~~ 171 (172)
||+. +.. +++.++||++|++...+..+ ... ....+.++.+...+.|.++++|++. ||+++
T Consensus 1226 AGi~dp~e~~~~i~~s~vGv~vGs~~gg~~~~~~~~~~~~~~~~v~~~~~~~~~~n~~aa~is~~~lgl~G 1296 (1887)
T 2uv8_A 1226 SGITDPYEMYKYVHVSEVGNCSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSG 1296 (1887)
T ss_dssp TTCSSGGGHHHHSCGGGEEECCEESSCCHHHHHHHHTTTTTTCCCCTTHHHHHSTTHHHHHHHHHTTCCCS
T ss_pred cCCCChhhhhcccCCceeEEEeccCCccHHHHHHHHHHHHhcCCCCcchhhcchhhHHHHHHHHHHcCCcc
Confidence 9995 555 67889999999875543211 110 1123677778888899999999995 99876
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.40 E-value=5.6e-13 Score=123.56 Aligned_cols=121 Identities=15% Similarity=0.154 Sum_probs=90.0
Q ss_pred cccccccccccccccCcccccCCCCCCCCCCcccCCcCCCCccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCC
Q psy11963 40 YETIGSTRAMLANRLSYAFNFSGLYGAPSRTGKIKDIASFDAEFFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEEL 119 (172)
Q Consensus 40 w~~l~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~ 119 (172)
|+.+..+++.+. .+. .... +++.+|+++ ++||+.+|+|++++++.|||+++++++++++||+|||++++.+
T Consensus 2599 W~~~~~~~~~i~-~p~----~~~~--~~~~gG~i~--d~FD~~~fgIs~rea~~mDp~~rL~l~aa~eALedAGi~p~~l 2669 (3089)
T 3zen_D 2599 WEVTRKAGTEIR-VPR----KTKL--SRTVGAQIP--TGFDPTVWGISPDMASSIDRVALWNIVATVDAFLSSGFTPTEL 2669 (3089)
T ss_dssp EEEEECTTCEEE-EEE----EECC--SCCEEECCC--TTCCTTTTTCCHHHHHHSCHHHHHHHHHHHHHHTTSCSCGGGH
T ss_pred eeeeecCCCCcC-CCC----cCCc--cceEEEEcC--CCCChhhcCCCHHHHHhcCHHHHHHHHHHHHHHHHcCCCHHHh
Confidence 777777766652 121 1112 456788886 4799999999999999999999999999999999999988765
Q ss_pred ----CCCcceEEEcccch-------hHHHHhccCCCCCCccccccchhhHHHhHHHHHh-CCCC
Q psy11963 120 ----RGTRTGVYIGLMTT-------EANDFAEGNPEKLTGYETIGSTRAMLANRLSYAF-NFSV 171 (172)
Q Consensus 120 ----~~~r~gv~vG~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~-~l~~ 171 (172)
++.++||++|++.. .|..+.. +....++ .++..+++.++++|++.+ |+++
T Consensus 2670 ~~~~~~~~vGV~vG~~~gg~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~aa~is~~~lGl~G 2731 (3089)
T 3zen_D 2670 MRWVHPSQVASTQGTGMGGMTSMQTMYHGNLL-GRAKPND-ILQEVLPNVVAAHVMQSYVGGYG 2731 (3089)
T ss_dssp HHHSCGGGEEEEEEESSCCHHHHHHHHHHHHT-TCCCCTT-HHHHTSTTHHHHHHHHHTTCCCS
T ss_pred hcccCcceeEEEEeecCccHHHHHHHHHHHhc-CCCccch-hhccccccHHHHHHHHHHcCCCC
Confidence 67899999997643 3333333 3333343 456778899999999754 8875
No 26
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.40 E-value=3.2e-05 Score=72.45 Aligned_cols=63 Identities=51% Similarity=0.955 Sum_probs=57.2
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCC
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGL 63 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~ 63 (172)
||||+++++++|++||||+|++..+|......++..+.++..++...+.+++|.++.|+++|.
T Consensus 91 e~Ag~~~~~~~~~~~gv~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~Gp 153 (2512)
T 2vz8_A 91 VDGGINPASLRGTSTGVWVGVSSSDASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGP 153 (2512)
T ss_dssp GGGTCCGGGGTTCSCEEEEEECCCHHHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCSC
T ss_pred HHCCCChhhcCCCCeEEEEEeccHHHHHHHhcCccccCcceecccchhHHHHHHHHHhCCCCC
Confidence 799999999999999999999999998877777777778888888999999999999999987
No 27
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=97.16 E-value=0.00032 Score=54.13 Aligned_cols=51 Identities=8% Similarity=-0.061 Sum_probs=40.2
Q ss_pred CCCccccCCCHHHHhhc-----ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 78 SFDAEFFGIHSKLANVM-----DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 78 ~fd~~~~~~~~~~~~~~-----d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
.||+.+|+++.++...+ ++...++++|+++||++||+++++++ +|++|+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~Aa~~al~~ag~~~~~id----~vi~~t~~ 126 (374)
T 2h84_A 71 KPENSIKFRHLETITDVNNQFKKVVPDLAQQACLRALKDWGGDKGDIT----HIVSVTST 126 (374)
T ss_dssp SGGGCGGGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEESS
T ss_pred ccccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeC
Confidence 47788777777777766 88999999999999999999876654 56667543
No 28
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=96.81 E-value=0.00013 Score=63.03 Aligned_cols=63 Identities=49% Similarity=0.949 Sum_probs=54.9
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCC
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGL 63 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~ 63 (172)
||||++++.+++++||||+|++..+|......++..+..+...+...+.++.+.++.|+++|.
T Consensus 93 edAGi~~~~i~~~~~Gv~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~GP 155 (965)
T 3hhd_A 93 VDGGINPDSLRGTHTGVWVGVSGSETSEALSRDPETLVGYSMVGCQRAMMANRLSFFFDFRGP 155 (965)
T ss_dssp HHTTCCGGGGTTSCCEEEEEECCCHHHHHHTSCTTTCCTHHHHHHSTTHHHHHHHHHHTCCSC
T ss_pred HHcCCChHHcCCceeEEEEeccchhHHHHHhcCccccCcccccccccchHHHHHHHHhCCCCC
Confidence 689999999999999999999999998877777777777777777788888899988988874
No 29
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=96.39 E-value=0.0039 Score=46.56 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=28.3
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
++..+++++++++||+|||+++++++ +|++|+..
T Consensus 48 ~~~~~l~~~a~~~al~~ag~~~~~id----~v~~~~~~ 81 (309)
T 2ebd_A 48 ETITYMATQAAKEALREANLSPEELD----LIILATLT 81 (309)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCC
Confidence 56789999999999999999876554 78888654
No 30
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=96.29 E-value=0.00048 Score=59.23 Aligned_cols=63 Identities=27% Similarity=0.590 Sum_probs=48.5
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCC
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGL 63 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~ 63 (172)
||||++++.+++++|||++|++..+|.......+..+..+.......+.++.+.++.+++.|.
T Consensus 129 edAGi~~~~i~~~~~gV~vG~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gp 191 (917)
T 2hg4_A 129 ERAGHDPVSLRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGP 191 (917)
T ss_dssp HHTTCCGGGGTTSCEEEEEEECCCCCSCCTTSSCGGGGGGHHHHHCHHHHHHHHHHHHTCCSC
T ss_pred HHcCCChHHcCCcceEEEEEeCCchhhhhhhcCccccCcccccccccchHHHHHHHhcCCCCC
Confidence 589999999999999999999999987655555555555555555566677777777877764
No 31
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=96.24 E-value=0.0049 Score=46.79 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~ 133 (172)
++..+++++++++||+|||+++++++ +|++|+...
T Consensus 58 ~~~~~la~~Aa~~al~~ag~~~~~id----~vi~gt~~~ 92 (339)
T 1mzj_A 58 ETIQVMGVAASRRALEHAGVDPAEID----LVVVSTMTN 92 (339)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCC
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC
Confidence 56789999999999999999876554 688886543
No 32
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=96.01 E-value=0.0073 Score=47.04 Aligned_cols=33 Identities=21% Similarity=0.254 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~ 133 (172)
..+++++++++||+|||+++++++ +|++|+...
T Consensus 26 ~~~L~~~Aa~~Al~dAgl~~~~id----~v~~g~~~~ 58 (401)
T 1ulq_A 26 PDDLLAHALSVLVDRSGVPKEEVE----DVYAGCANQ 58 (401)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeccc
Confidence 467899999999999999876655 788886544
No 33
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=95.97 E-value=0.0047 Score=47.95 Aligned_cols=34 Identities=18% Similarity=0.232 Sum_probs=26.6
Q ss_pred hHHHHHHHHHHHHHHhC-CCCCCCCCCCcceEEEcccch
Q psy11963 96 PQLRMLLELTHESIMDG-GFNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dA-G~~~~~~~~~r~gv~vG~~~~ 133 (172)
+.++++++++++||+|| |+++++++ +|++|+...
T Consensus 29 ~~~~L~~~a~~~AL~dA~gl~~~~id----~v~~g~~~~ 63 (390)
T 1wdk_C 29 RAEDMSAHLISKVLERNSKVDPGEVE----DVIWGCVNQ 63 (390)
T ss_dssp CHHHHHHHHHHHHHHHCTTSCGGGEE----EEEEECSSB
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHCC----EEEEEeecc
Confidence 35789999999999999 99765443 788886543
No 34
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=95.90 E-value=0.01 Score=44.44 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=28.1
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
.++..+++++++++||+|||+++++++ +|++|+..
T Consensus 48 ~~~~~~l~~~a~~~al~~ag~~~~~id----~vi~g~~~ 82 (317)
T 1hnj_A 48 NETVSTMGFEAATRAIEMAGIEKDQIG----LIVVATTS 82 (317)
T ss_dssp TCCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSC
T ss_pred CCCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCC
Confidence 357789999999999999999866543 67888653
No 35
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=95.87 E-value=0.012 Score=46.51 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccchh
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTTE 134 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~~ 134 (172)
..+++++++++||+|||++++.++ +|++|+...+
T Consensus 55 ~~~La~~Aa~~AL~dAGl~~~~Id----~vi~g~~~~~ 88 (442)
T 2wu9_A 55 PDDLLAPVLRALIEKTNLNPSEVG----DIVVGTVLAP 88 (442)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----CEEEECCSSB
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeecCc
Confidence 467899999999999999877665 5888866543
No 36
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=95.72 E-value=0.01 Score=46.17 Aligned_cols=32 Identities=16% Similarity=0.220 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
.++++++++++||+|||+++++++ +|++|+..
T Consensus 30 ~~~L~~~a~~~Al~dAGl~~~~id----~v~~g~~~ 61 (397)
T 1wl4_A 30 VQDLGSTVIKEVLKRATVAPEDVS----EVIFGHVL 61 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecC
Confidence 368999999999999999876655 57777543
No 37
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=95.57 E-value=0.0053 Score=47.68 Aligned_cols=29 Identities=10% Similarity=0.118 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcce
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTG 125 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~g 125 (172)
.++++++++++||+|||+++++++.-.+|
T Consensus 27 ~~~L~~~a~~~Al~dAgl~~~~id~~~~g 55 (392)
T 2vu1_A 27 AHELGATVISAVLERAGVAAGEVNEVILG 55 (392)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEE
Confidence 46789999999999999987766543333
No 38
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=95.57 E-value=0.023 Score=44.18 Aligned_cols=33 Identities=15% Similarity=0.008 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhCC----CCCCCCCCCcceEEEcccch
Q psy11963 97 QLRMLLELTHESIMDGG----FNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG----~~~~~~~~~r~gv~vG~~~~ 133 (172)
..+++++++++||+||| +++++++ +|++|+...
T Consensus 35 ~~~La~~Aa~~Al~~Ag~~~~l~~~~id----~v~~g~~~~ 71 (393)
T 1afw_A 35 TDYLLYNFLNEFIGRFPEPLRADLNLIE----EVACGNVLN 71 (393)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHTCGGGCC----CEEEECSSS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCHHHCC----EEEEEecCC
Confidence 36789999999999999 9876665 588886543
No 39
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=95.49 E-value=0.014 Score=45.05 Aligned_cols=45 Identities=4% Similarity=-0.015 Sum_probs=34.7
Q ss_pred ccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 83 FFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 83 ~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.+++++++....++...++++|+++||++||+++++++ .|++++.
T Consensus 70 ~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~id----~vi~~t~ 114 (382)
T 1u0m_A 70 HPGFEDRNKVYEREAKSRVPAVIQRALDDAELLATDID----VIIYVSC 114 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCS----EEEEECS
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCC----EEEEEec
Confidence 45567777777788899999999999999999765543 4566654
No 40
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=95.43 E-value=0.015 Score=43.85 Aligned_cols=35 Identities=17% Similarity=0.348 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~ 133 (172)
++..+++++|+++||+|||+++++++ +|++|+...
T Consensus 59 ~~~~~la~~A~~~al~~ag~~~~~id----~vi~~t~~~ 93 (335)
T 1u6e_A 59 ESAASMATEACRRALSNAGLSAADID----GVIVTTNTH 93 (335)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSCC
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCCC
Confidence 56789999999999999999876554 688886543
No 41
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=95.40 E-value=0.0018 Score=55.73 Aligned_cols=62 Identities=31% Similarity=0.617 Sum_probs=43.3
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccchhhcCCcccccccccccccccccccccCcccccCCC
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEANDFAEGNPEKLTGYETIGSTRAMLANRLSYAFNFSGL 63 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~~~~~~~~~~~~w~~l~~g~s~~~~~~~~~~~~~~~ 63 (172)
||||++++.+++++|||++|++..+|.... .....++.+...+...+.++.+.++.+++.|.
T Consensus 108 edAGi~~~~i~~~~~gV~vG~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~a~ris~~lgl~Gp 169 (915)
T 2qo3_A 108 ENAGIDPHSLRGTATGVFLGVAKFGYGEDT-AAAEDVEGYSVTGVAPAVASGRISYTMGLEGP 169 (915)
T ss_dssp HHTTCCGGGGTTBCCEEEEECCCCCTTTTC-C---CTTCHHHHTTCHHHHHHHHHHHHTBCSC
T ss_pred HHcCCChHHcCCcceEEEEEecCchHHhhh-cccccccccccccccccHHHHHHHHHhCCCCC
Confidence 589999999999999999999998886533 23334444444555555666677777777653
No 42
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=95.15 E-value=0.029 Score=42.10 Aligned_cols=34 Identities=9% Similarity=0.021 Sum_probs=26.7
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
++..+++++++++||+|||+++++++ +|++|+..
T Consensus 48 ~~~~~la~~a~~~al~~ag~~~~~id----~vi~~~~~ 81 (322)
T 1ub7_A 48 EYTSDLAFKAVEDLLRRHPGALEGVD----AVIVATNT 81 (322)
T ss_dssp CCHHHHHHHHHHHHHHHSTTTTTTEE----EEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCC
Confidence 46789999999999999999765432 57878653
No 43
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=95.04 E-value=0.01 Score=46.05 Aligned_cols=30 Identities=20% Similarity=0.318 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
.++++++++++||+|||++++.++. +++|.
T Consensus 32 ~~~l~~~a~~~Al~dAgl~~~~id~----~~~g~ 61 (395)
T 2ib8_A 32 ATKLGSIAIQGAIEKAGIPKEEVKE----AYMGN 61 (395)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCE----EEEEC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCE----EEEEe
Confidence 4679999999999999998766653 55554
No 44
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=94.86 E-value=0.036 Score=41.38 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
.+..+++++++++||+|||+++++++ +|++|+..
T Consensus 49 ~~~~~l~~~a~~~al~~ag~~~~~id----~vi~~~~~ 82 (313)
T 1zow_A 49 QDTSDLAYEASVKAIADAGIQPEDID----MIIVATAT 82 (313)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS
T ss_pred CCHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcCC
Confidence 35688999999999999999766554 68888654
No 45
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=94.85 E-value=0.039 Score=43.24 Aligned_cols=34 Identities=18% Similarity=0.315 Sum_probs=27.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~ 133 (172)
...+|+++++++||+|||+++++++ +|++|+...
T Consensus 54 ~~~~L~~~Aa~~AL~dAgl~~~~id----~v~~g~~~~ 87 (418)
T 2iik_A 54 TPDELLSAVMTAVLKDVNLRPEQLG----DICVGNVLQ 87 (418)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC----CEEEECSSS
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecCC
Confidence 3578999999999999999877665 588886543
No 46
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=94.19 E-value=0.038 Score=42.73 Aligned_cols=50 Identities=8% Similarity=0.005 Sum_probs=37.9
Q ss_pred CCCccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 78 SFDAEFFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 78 ~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.||+.+..+..++...+.....++.+|+++||+++|+++++++ .|++++.
T Consensus 79 ~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~ 128 (387)
T 3a5r_A 79 IAAYEATSLNVRHKMQVKGVAELGKEAALKAIKEWGQPKSKIT----HLIVCCL 128 (387)
T ss_dssp HHSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEES
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 3555556677788888888899999999999999999776543 3555543
No 47
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=93.53 E-value=0.083 Score=41.11 Aligned_cols=50 Identities=8% Similarity=-0.050 Sum_probs=37.6
Q ss_pred CCCccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 78 SFDAEFFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 78 ~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.||+.+..+..+....+.....++.+|+++||+++|+++++++ .|++++.
T Consensus 96 ~~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~ 145 (406)
T 2d3m_A 96 ITSYDEPSLNDRQDICVPGVPALGTEAAVKAIEEWGRPKSEIT----HLVFCTS 145 (406)
T ss_dssp TSSSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEES
T ss_pred cccccCCChHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 3555555677788888888999999999999999999765443 3555543
No 48
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=92.47 E-value=0.12 Score=44.57 Aligned_cols=41 Identities=5% Similarity=0.038 Sum_probs=30.5
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcc
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGL 130 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~ 130 (172)
+..++.+.++....|+++|+++||++||+++++++. |++++
T Consensus 678 ~~~r~~~~~~~~~~la~~Aa~~AL~~agl~~~dId~----ii~~t 718 (979)
T 3tsy_A 678 LNIRQEIITAEVPKLGKEAALKALKEWGQPKSKITH----LVFCT 718 (979)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCCE----EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCE----EEEEe
Confidence 455566666667889999999999999998765542 55554
No 49
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=91.99 E-value=0.17 Score=39.18 Aligned_cols=32 Identities=13% Similarity=0.270 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
...|+++++++||+|||+++++++ +|++|+..
T Consensus 31 ~~~L~~~A~~~AL~~agl~~~dId----~vi~g~~~ 62 (396)
T 4dd5_A 31 AVELGVTAAKEAIKRANITPDMID----ESLLGGVL 62 (396)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeec
Confidence 467889999999999999887665 57877653
No 50
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=91.51 E-value=0.26 Score=38.06 Aligned_cols=33 Identities=12% Similarity=0.202 Sum_probs=26.8
Q ss_pred ChHHHHHHHHHHHHHHhC-CCCCCCCCCCcceEEEccc
Q psy11963 95 DPQLRMLLELTHESIMDG-GFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dA-G~~~~~~~~~r~gv~vG~~ 131 (172)
.+++.|+++++++||+|| |+++++++ +|++|+.
T Consensus 25 ~~~~~L~~~a~~~Al~~a~gi~~~~Id----~v~~g~~ 58 (387)
T 3goa_A 25 VRAEDLSAHLMRSLLARNPSLTAATLD----DIYWGCV 58 (387)
T ss_dssp SCHHHHHHHHHHHHHHHCTTSCGGGCC----EEEEECS
T ss_pred CCHHHHHHHHHHHHHHhccCCCHHHcC----EEEEEcc
Confidence 356789999999999999 99887665 4777754
No 51
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=90.43 E-value=0.3 Score=36.80 Aligned_cols=34 Identities=9% Similarity=0.204 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccch
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMTT 133 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~~ 133 (172)
+...++.+|+++||++||+++++++ .|++|+...
T Consensus 64 ~~~~la~~Aa~~al~~ag~~~~~Id----~vi~~t~~~ 97 (333)
T 4dfe_A 64 TTSDLAFIASQRAIEAADIDPQSID----LIIVATSTP 97 (333)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSSC
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCCC
Confidence 4678999999999999999876654 577776543
No 52
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=90.07 E-value=0.32 Score=37.85 Aligned_cols=32 Identities=13% Similarity=0.276 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHHHh-CCCCCCCCCCCcceEEEccc
Q psy11963 96 PQLRMLLELTHESIMD-GGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~d-AG~~~~~~~~~r~gv~vG~~ 131 (172)
+...|+.+++++||+| ||+++++++ +|++|+.
T Consensus 31 ~~~~L~~~A~~~AL~~~AGl~~~dId----~vi~g~~ 63 (407)
T 3svk_A 31 KPLNLVVGLVDELRRRYPDLDETLIS----DMILGVV 63 (407)
T ss_dssp CHHHHHHHHHHHHHHHSTTCCGGGEE----EEEEECC
T ss_pred CHHHHHHHHHHHHHhhhcCcCHHHCC----EEEEEec
Confidence 3467889999999999 999887665 5777754
No 53
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=89.79 E-value=0.36 Score=36.22 Aligned_cols=32 Identities=16% Similarity=0.206 Sum_probs=24.8
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
++..+++++|+++||++||+ +++ -.|++|+..
T Consensus 51 ~~~~~la~~Aa~~al~~ag~--~~i----d~vi~~t~~ 82 (331)
T 2x3e_A 51 LGSGDLALRAASAALASAGL--ERV----DAVVLATST 82 (331)
T ss_dssp CCHHHHHHHHHHHHHHHHTC--SCC----SEEEEECSS
T ss_pred CCHHHHHHHHHHHHHHhCCc--ccC----CEEEEEeCC
Confidence 57889999999999999998 332 257777654
No 54
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=89.34 E-value=0.52 Score=36.72 Aligned_cols=42 Identities=12% Similarity=0.108 Sum_probs=31.7
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
+..+....++....++.+|+++||++||+++++++ .|++|+.
T Consensus 114 ~~~r~~~~~~~~~~La~~Aa~~AL~~agl~~~~Id----~li~~t~ 155 (413)
T 1xes_A 114 LDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGIT----HLIFCST 155 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEES
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEe
Confidence 34566666778889999999999999999876554 3566654
No 55
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=89.16 E-value=0.078 Score=41.46 Aligned_cols=28 Identities=29% Similarity=0.554 Sum_probs=24.5
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccch
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAND 28 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~ 28 (172)
||||++++.+++++|+|++|....++..
T Consensus 86 ~dAG~~~~~i~~~~~gv~~g~~~~~~~~ 113 (424)
T 1tqy_A 86 AASGLDPDTLDPARVGVSLGSAVAAATS 113 (424)
T ss_dssp HHHTCCTTTCCGGGEEEEEECSSTTHHH
T ss_pred HHCCCCchhcCCCceEEEEEeCCccHHH
Confidence 5799999999999999999988877643
No 56
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=88.91 E-value=0.41 Score=36.29 Aligned_cols=33 Identities=6% Similarity=0.084 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
....|+.+|+++||++||+++++++ .|++|+..
T Consensus 67 ~~~~La~~Aa~~al~~ag~~~~~Id----~vi~~t~~ 99 (345)
T 3s21_A 67 QASDAATQAARKALIDANIGIEKIG----LLINTSVS 99 (345)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGCC----EEEECCSC
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCC
Confidence 3567899999999999999877654 47777654
No 57
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=88.49 E-value=0.2 Score=38.89 Aligned_cols=50 Identities=8% Similarity=-0.007 Sum_probs=37.6
Q ss_pred CCCccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 78 SFDAEFFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 78 ~fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.||+.+..+..+....+.....++.+|+++||+++|+++++++ .|++++.
T Consensus 88 ~~d~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id----~vi~~t~ 137 (402)
T 1ee0_A 88 MCEFMAPSLNARQDLVVTGVPMLGKEAAVKAIDEWGLPKSKIT----HLIFCTT 137 (402)
T ss_dssp GGSTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEECS
T ss_pred cccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 4566666677777788888899999999999999999765443 3555543
No 58
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=87.55 E-value=0.43 Score=36.87 Aligned_cols=31 Identities=26% Similarity=0.304 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+++++++||+|||+++++++ +|++|+.
T Consensus 29 ~~~L~~~a~~~Al~~agi~~~~Id----~v~~g~~ 59 (395)
T 4e1l_A 29 AVQLGTIAVKEAISRVGLNLSEID----EVIIGNV 59 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 456899999999999999887765 5677743
No 59
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=87.28 E-value=0.23 Score=38.33 Aligned_cols=49 Identities=10% Similarity=0.028 Sum_probs=36.5
Q ss_pred CCccccCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 79 FDAEFFGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 79 fd~~~~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
||+.+..+.++....+.....++.+|+++||+++|+++++++ .|++++.
T Consensus 84 ~~~~~~~~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id----~li~~t~ 132 (389)
T 1i88_A 84 CEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKIT----HLIVCTT 132 (389)
T ss_dssp HSSSCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEES
T ss_pred hcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEC
Confidence 444445567777777788899999999999999999776543 4566644
No 60
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=87.15 E-value=0.055 Score=42.59 Aligned_cols=26 Identities=27% Similarity=0.337 Sum_probs=22.9
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||++++.+.+++++|++|....++
T Consensus 111 ~dAGl~~~~i~~~~~gv~vg~~~~~~ 136 (437)
T 2gqd_A 111 KDAQLDINENTADRIGVWIGSGIGGM 136 (437)
T ss_dssp HHHTCCCCTTTGGGEEEEEECSSCCH
T ss_pred HHcCCCccccCCcceEEEEeecCCcH
Confidence 57999999999999999999877664
No 61
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=86.41 E-value=0.063 Score=41.92 Aligned_cols=26 Identities=27% Similarity=0.262 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||++++.+++++++|++|....++
T Consensus 90 ~dAg~~~~~i~~~~~gv~~g~~~~~~ 115 (416)
T 1e5m_A 90 NDAKLVINELNADEIGVLIGTGIGGL 115 (416)
T ss_dssp HHHTCCCCTTTGGGEEEEEECSSCSH
T ss_pred HHcCCChhhcCccceEEEEeecCCcH
Confidence 57999999999999999999877664
No 62
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=86.38 E-value=0.61 Score=36.02 Aligned_cols=31 Identities=23% Similarity=0.522 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+++++++||+|||+++++++ +|++|..
T Consensus 29 ~~~L~~~A~~~Al~~agl~~~~Id----~v~~g~~ 59 (394)
T 3ss6_A 29 PVELAVPVLQEAVKRGGVEPHEVD----EVILGHC 59 (394)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGCC----EEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHhHCC----EEEEEEc
Confidence 467899999999999999887765 4777754
No 63
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=86.37 E-value=0.73 Score=35.52 Aligned_cols=33 Identities=3% Similarity=0.184 Sum_probs=24.0
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.....++++|+++||++||+++++++ .|++|+.
T Consensus 111 ~~~~~la~~Aa~~aL~~agl~~~~Id----~vi~~t~ 143 (393)
T 1ted_A 111 EHAVPLAVDVSKRALAGLPYRAAEIG----LLVLATS 143 (393)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCGGGEE----EEEEEES
T ss_pred hhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEe
Confidence 35678999999999999999754332 3455543
No 64
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=86.07 E-value=0.044 Score=42.75 Aligned_cols=25 Identities=28% Similarity=0.452 Sum_probs=21.8
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTE 25 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~ 25 (172)
||||++++.+++++++|++|....+
T Consensus 87 ~dAGl~~~~id~~~~gv~vgt~~g~ 111 (413)
T 3o04_A 87 QDSGLVIDDSNANRVGVWIGSGIGG 111 (413)
T ss_dssp HHHTCCCCTTTGGGEEEEEECSSCC
T ss_pred HHcCCChhHcCccceEEEEccccCc
Confidence 5899999999999999999986543
No 65
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=85.92 E-value=0.04 Score=43.24 Aligned_cols=27 Identities=30% Similarity=0.519 Sum_probs=23.7
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~ 27 (172)
||||++++.+++.++||++|....++.
T Consensus 105 ~dAGl~~~~i~~~~~Gv~~g~~~~~~~ 131 (428)
T 3mqd_A 105 ADAGLTEEEVSNERTGIIMGSGGPSTR 131 (428)
T ss_dssp HHHTCCHHHHSSTTEEEEEEESSCCHH
T ss_pred HHcCCChhHccccceEEEEccCCCchH
Confidence 578999999999999999998877665
No 66
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=85.65 E-value=1.1 Score=33.59 Aligned_cols=32 Identities=16% Similarity=0.283 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
...++.+|+++||+++|+++++++ .|++|+..
T Consensus 58 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~~ 89 (323)
T 3il3_A 58 VATMGFEAAKNAIEAAQINPQDIE----LIIVATTS 89 (323)
T ss_dssp HHHHHHHHHHHHHHHHCCCGGGCC----EEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCC
Confidence 467899999999999999876654 46777543
No 67
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=85.19 E-value=0.11 Score=40.59 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=24.3
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccch
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAND 28 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~ 28 (172)
||||++++.+++.+++|++|....++..
T Consensus 92 ~dAGl~~~~id~~~~gv~~g~~~~~~~~ 119 (415)
T 1tqy_B 92 QDAKADPESLTDYDMGVVTANACGGFDF 119 (415)
T ss_dssp HHTTCCGGGSCGGGEEEEEECSSCSHHH
T ss_pred HHcCCCccccCCCCEEEEEeeCCccHHH
Confidence 5899999999999999999988777643
No 68
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=82.36 E-value=0.16 Score=39.82 Aligned_cols=26 Identities=19% Similarity=0.193 Sum_probs=22.9
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||++++.+++.+++|++|....++
T Consensus 106 ~dAG~~~~~i~~~~~gv~vg~~~~~~ 131 (430)
T 1ox0_A 106 NHANLDVEALNRDRFGVIVASGIGGI 131 (430)
T ss_dssp HHTTCCTTTSCGGGEEEEEECSSCSH
T ss_pred HHcCCChhhcCccceEEEEEecCCcH
Confidence 58999999999999999999877664
No 69
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=81.76 E-value=0.66 Score=35.97 Aligned_cols=44 Identities=7% Similarity=0.020 Sum_probs=32.4
Q ss_pred cCCCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 84 FGIHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 84 ~~~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
..+..+..........++.+|+++||+++|+++++++ .|++++.
T Consensus 102 ~~~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~~Id----~vi~~t~ 145 (402)
T 3awk_A 102 ASLDPRQDIAVLEVPKLAKEAAISAIKQWGQPKSKIT----HLVFATT 145 (402)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCGGGCC----EEEEEEC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEe
Confidence 3455666666677889999999999999999776543 3555543
No 70
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=81.23 E-value=0.071 Score=41.49 Aligned_cols=28 Identities=25% Similarity=0.405 Sum_probs=23.3
Q ss_pred CCCCCCCCCCCC-CcceEEEeeecCccch
Q psy11963 1 MDGGFNPEELRG-TRTGVYIGLMTTEAND 28 (172)
Q Consensus 1 ~~ag~~~~~~~~-~~~~V~vg~~~~~~~~ 28 (172)
||||++++.+++ ++++|++|....++..
T Consensus 84 ~dAg~~~~~i~~~~~~gv~vg~~~~~~~~ 112 (406)
T 2vba_A 84 ADAGLSPEAYQNNPRVGLIAGSGGGSPRF 112 (406)
T ss_dssp HHHTCCHHHHTTCTTEEEEEECSSCCHHH
T ss_pred HHCCCChhHcCCCCCEEEEEEECCcchHH
Confidence 478998888888 9999999988777643
No 71
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=80.66 E-value=0.099 Score=41.01 Aligned_cols=25 Identities=40% Similarity=0.551 Sum_probs=21.4
Q ss_pred CCCCCCCCC-CCCCcceEEEeeecCc
Q psy11963 1 MDGGFNPEE-LRGTRTGVYIGLMTTE 25 (172)
Q Consensus 1 ~~ag~~~~~-~~~~~~~V~vg~~~~~ 25 (172)
||||++++. +.+.+++|++|.....
T Consensus 100 ~dAGl~~~~~id~~~~gv~vg~~~g~ 125 (428)
T 3kzu_A 100 DDAGWHPENDEDQVRTGVLIGSGIGG 125 (428)
T ss_dssp HHHTCCCCSHHHHHTEEEEEECSSCS
T ss_pred HhcCCChhhhccccceEEEEcccCCc
Confidence 589999998 9999999999976544
No 72
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=79.63 E-value=0.13 Score=40.33 Aligned_cols=26 Identities=31% Similarity=0.321 Sum_probs=22.2
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||++++.+.+.++||++|....+.
T Consensus 101 ~dAGl~~~~i~~~~~gv~vg~~~g~~ 126 (427)
T 3ho9_A 101 QDSGLEITEENATRIGAAIGSGIGGL 126 (427)
T ss_dssp HHHTCCCCTTTGGGEEEEEECSSCCH
T ss_pred HHCCCCcccccccceEEEEccccccH
Confidence 58999999999999999999775443
No 73
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=77.56 E-value=0.15 Score=39.94 Aligned_cols=27 Identities=33% Similarity=0.286 Sum_probs=22.6
Q ss_pred CCCCC-CCCCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGF-NPEELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~-~~~~~~~~~~~V~vg~~~~~~~ 27 (172)
||||+ +++.+.+++++|++|....++.
T Consensus 101 ~dAG~~~~~~i~~~~~gv~vg~~~~~~~ 128 (431)
T 2ix4_A 101 RDAEWLPTEEEEKERTGVSIGGGIGSIC 128 (431)
T ss_dssp HHTTCCCCSHHHHHTEEEEEEESSCCHH
T ss_pred HHcCCCCccccCCCCEEEEEeeccccHH
Confidence 57999 8888889999999998776543
No 74
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=76.74 E-value=0.57 Score=36.76 Aligned_cols=26 Identities=27% Similarity=0.252 Sum_probs=21.6
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccch
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAND 28 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~~ 28 (172)
||||+ +.+++++++|++|....++..
T Consensus 112 edAG~--~~~~~~~igv~vgt~~~~~~~ 137 (434)
T 2gp6_A 112 ENAGS--PEVDTNRLMVSIGTGLGSAEE 137 (434)
T ss_dssp HHTTC--CCCCTTSEEEEEECSSCSCHH
T ss_pred HhcCC--CccCCCceEEEEccccccHHH
Confidence 57898 678899999999988887754
No 75
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=75.37 E-value=1.1 Score=34.54 Aligned_cols=42 Identities=12% Similarity=0.185 Sum_probs=31.8
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
+..+....++....|+.+|+++||++||+++++++ .|++++.
T Consensus 85 ~~~r~~~~~~~~~~La~~Aa~~AL~~ag~~~~dId----~li~~t~ 126 (387)
T 3oit_A 85 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADIT----HLVVTTN 126 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEee
Confidence 45566666678889999999999999999876654 4566643
No 76
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=74.01 E-value=2.4 Score=31.66 Aligned_cols=32 Identities=9% Similarity=0.188 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
...|+.+|+++||++||+++++++ .|++|+..
T Consensus 52 ~~~La~~Aa~~aL~~ag~~~~~Id----~li~~t~~ 83 (321)
T 3il6_A 52 TSDLCHQVAKQLLEKSGKQASEID----FILVATVT 83 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCC
Confidence 567899999999999999876554 57777543
No 77
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=73.85 E-value=0.4 Score=37.42 Aligned_cols=25 Identities=24% Similarity=0.217 Sum_probs=21.1
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~ 27 (172)
||||+ +.+++++++|++|....++.
T Consensus 96 ~dAG~--~~~~~~~~gv~vg~~~~~~~ 120 (416)
T 2wge_A 96 ESAGS--PEVDPDRFAVVVGTGLGGAE 120 (416)
T ss_dssp HHTTC--CCCCGGGEEEEEECCSCCCT
T ss_pred HHcCC--CccCCCceEEEEeecCCcHH
Confidence 57898 77889999999998877764
No 78
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=73.54 E-value=0.38 Score=37.42 Aligned_cols=26 Identities=31% Similarity=0.491 Sum_probs=21.6
Q ss_pred CCCCC-CCCCCCCCcceEEEeeecCcc
Q psy11963 1 MDGGF-NPEELRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~-~~~~~~~~~~~V~vg~~~~~~ 26 (172)
||||+ +++.+.+.+++|++|....++
T Consensus 90 ~dAGl~~~~~i~~~~~gv~~g~~~g~~ 116 (412)
T 4ewg_A 90 ADAGFAGDESISDGRMGVAYGSSSGSV 116 (412)
T ss_dssp HHHTCTTCGGGGTTTEEEEEECSCCCH
T ss_pred HhcCCCCccccCccceEEEEeccCCch
Confidence 47899 788899999999999876543
No 79
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=71.93 E-value=2.8 Score=31.75 Aligned_cols=32 Identities=6% Similarity=0.062 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
...|+.+|+++||++||+++++++ .|++|+..
T Consensus 66 ~~~La~~Aa~~aL~~agi~~~~Id----~vi~~t~~ 97 (354)
T 4efi_A 66 AGDLCRKAGEKLLAGLGWQADSID----ALIFVSQT 97 (354)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeCC
Confidence 467889999999999999876654 47777544
No 80
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=71.33 E-value=3.4 Score=31.44 Aligned_cols=32 Identities=13% Similarity=0.351 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
...|+.+|+++||++||+++++++ .|++++..
T Consensus 74 ~~~La~~Aa~~aL~~agl~~~dId----~vi~~t~~ 105 (359)
T 3h78_A 74 VSALMVPAARQAIEAAGLLPEDID----LLLVNTLS 105 (359)
T ss_dssp THHHHHHHHHHHHHHTTCCGGGCC----EEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCC----EEEEEeCC
Confidence 467899999999999999876654 46776543
No 81
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=70.80 E-value=1.9 Score=34.66 Aligned_cols=35 Identities=14% Similarity=0.182 Sum_probs=25.2
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEc
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIG 129 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG 129 (172)
+++ ..|+.++.++||+|||++++.++.--.|++++
T Consensus 40 ~s~-~dL~a~Ai~~AL~dAGl~p~~Vd~vI~g~~~~ 74 (520)
T 4egv_A 40 MSS-VELATEAAKAALHDCGADADTVARAIDTVAGT 74 (520)
T ss_dssp CCH-HHHHHHHHHHHHHHTSSCHHHHHHHCCEEEEC
T ss_pred CCH-HHHHHHHHHHHHHHhCcCHHHcceEEEEEeec
Confidence 444 34677899999999999887665544566654
No 82
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=70.19 E-value=1.8 Score=33.51 Aligned_cols=42 Identities=14% Similarity=0.169 Sum_probs=31.3
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
+..+....++....|+.+|+++||++||+++++++ .|++++.
T Consensus 91 ~~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~ 132 (393)
T 3ov2_A 91 FDDRQDIVVEEIPRLAKEAAEKAIKEWGRPKSEIT----HLVFCSI 132 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEES
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEEe
Confidence 34555556667888999999999999999876654 3666644
No 83
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=69.89 E-value=2.6 Score=31.79 Aligned_cols=31 Identities=19% Similarity=0.317 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
.-|+.+|+++||+++|+++++++ .|++++..
T Consensus 63 ~~la~~Aa~~aL~~ag~~~~dId----~li~~t~t 93 (350)
T 4ewp_A 63 PVMAVGAAREALERAGLQGSDLD----AVIVSTVT 93 (350)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCS----EEEEECSC
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEecc
Confidence 45889999999999999876543 35555443
No 84
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=68.52 E-value=4.3 Score=30.89 Aligned_cols=31 Identities=10% Similarity=0.148 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...++.+|+++||++||+++++++ .|++++.
T Consensus 80 ~~~La~~Aa~~aL~~ag~~~~~Id----~vi~~t~ 110 (365)
T 3gwa_A 80 AADLAYEAARKLFAQGAVGADQVD----FVILCTQ 110 (365)
T ss_dssp HHHHHHHHHHHHHHTTSCCGGGCC----EEEEEES
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeC
Confidence 467889999999999999876654 4666654
No 85
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=68.40 E-value=1.8 Score=33.46 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=25.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 96 PQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 96 ~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
....|+.+|+++||++||+++++++ .|++++..
T Consensus 116 ~~~~La~~Aa~~AL~~agi~~~dId----~vi~~t~t 148 (392)
T 3led_A 116 ILAEMAVTAAEQAIERWGKPRERIG----AVLCACSN 148 (392)
T ss_dssp HHHHHHHHHHHHHHHHHCSCGGGEE----EEEEESSC
T ss_pred cHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecC
Confidence 3568999999999999999876543 46777553
No 86
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=68.30 E-value=0.21 Score=39.21 Aligned_cols=27 Identities=33% Similarity=0.514 Sum_probs=22.6
Q ss_pred CCCCCCC-CCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGFNP-EELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~~-~~~~~~~~~V~vg~~~~~~~ 27 (172)
||||+++ +.+.+.+++|++|....++.
T Consensus 110 ~dAGl~~~~~i~~~~~gv~vg~~~~~~~ 137 (438)
T 2iwz_A 110 KDSGWHPQSEADQVATGVAIGMGMIPLE 137 (438)
T ss_dssp HHHTCCCCSHHHHHTEEEEEEESCCCHH
T ss_pred HHcCCCCcccccCcceEEEEecccCcHH
Confidence 4789988 88888899999998877653
No 87
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=68.11 E-value=2.5 Score=32.87 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=30.3
Q ss_pred CCHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 86 IHSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 86 ~~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
+..+..........++.+|+++||+++|+++++++ .|++++.
T Consensus 109 ~~~r~~~~~~~~~~La~~Aa~~aL~~agl~~~dId----~li~~t~ 150 (413)
T 2p0u_A 109 LNCRQEIAVAQVPKLAKEASMNAIKEWGRPKSEIT----HIVMATT 150 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCGGGCC----EEEEEES
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHCC----EEEEEec
Confidence 34455555567788999999999999999776543 3555543
No 88
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=64.97 E-value=4.6 Score=30.76 Aligned_cols=30 Identities=7% Similarity=0.222 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
..|+.+|+++||++||+++++++ .|++|+.
T Consensus 56 sdLa~~Aa~~AL~~AGi~~~DID----~II~gt~ 85 (347)
T 3lma_A 56 RKLMEDAVQSALSKQNLKKEDID----IFLAGDL 85 (347)
T ss_dssp HHHHHHHHHHHHHTTTCCGGGCS----EEEEEES
T ss_pred HHHHHHHHHHHHHHcCCCHHHCC----EEEEEeC
Confidence 56889999999999999887665 3556643
No 89
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=63.02 E-value=0.36 Score=38.09 Aligned_cols=26 Identities=19% Similarity=0.271 Sum_probs=21.8
Q ss_pred CCCCCCCCCC-CCCcceEEEeeecCcc
Q psy11963 1 MDGGFNPEEL-RGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~~~~~-~~~~~~V~vg~~~~~~ 26 (172)
||||++++.+ .+.+++|++|......
T Consensus 115 ~dAGl~~~~i~d~~~~gv~vgt~~g~~ 141 (451)
T 4ddo_A 115 AEAGWAPEAEQQRERTATVVASGIGGF 141 (451)
T ss_dssp HHHTCCCCSHHHHTTEEEEEECSSCSH
T ss_pred HHcCCChhhcccccceEEEEeecCCch
Confidence 5899999999 8999999999775443
No 90
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=62.70 E-value=4.1 Score=31.24 Aligned_cols=42 Identities=10% Similarity=0.169 Sum_probs=30.0
Q ss_pred CHHHHhhcChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 87 HSKLANVMDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 87 ~~~~~~~~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
..+..........|+.+|+++||++||+++++++ .|++++..
T Consensus 71 ~~r~~~~~~~~~~La~~Aa~~aL~~ag~~~~dId----~li~~t~t 112 (379)
T 3euo_A 71 KELHEVFMSDGVPLAVEASRKAMAEARLVPAQIT----HMVSTTCT 112 (379)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecC
Confidence 3444444556678999999999999999876654 46666543
No 91
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=59.40 E-value=1.6 Score=33.81 Aligned_cols=27 Identities=30% Similarity=0.524 Sum_probs=23.2
Q ss_pred CCCCCCCCCCCCCcceEEEeeecCccc
Q psy11963 1 MDGGFNPEELRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~~~~~~~~~~~V~vg~~~~~~~ 27 (172)
||||++++.+++.++||++|....++.
T Consensus 84 ~dAGl~~~~id~~~~gv~~g~~~~~~~ 110 (408)
T 1j3n_A 84 EDAGLKPEDLDPERVGTLVGTGIGGME 110 (408)
T ss_dssp HHHTCCGGGSCGGGEEEEEECSSCCHH
T ss_pred HHcCCCccccCCCceEEEEEecCCcHH
Confidence 579999999999999999998776653
No 92
>3s0r_A De novo designed helical assembly; interacts with single walled nanotube (SWNT), de novo protei; 2.45A {Artificial gene}
Probab=58.61 E-value=9.6 Score=17.06 Aligned_cols=13 Identities=8% Similarity=0.304 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHH
Q psy11963 98 LRMLLELTHESIM 110 (172)
Q Consensus 98 ~~~~l~aa~eAl~ 110 (172)
.+++|+++++||.
T Consensus 17 aqlalqaarqalk 29 (30)
T 3s0r_A 17 AQLALQAARQALK 29 (30)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 5678888888874
No 93
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=56.24 E-value=3.9 Score=32.40 Aligned_cols=32 Identities=9% Similarity=0.033 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
..-|+.+|+++||+++|+++++++ .|++|+..
T Consensus 54 ~~~La~~Aa~~AL~~agi~~~dId----~IivaT~t 85 (460)
T 2v4w_A 54 INSLCLTVVQRLMERIQLPWDSVG----RLEVGTET 85 (460)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE----EEEEECSC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEecC
Confidence 356889999999999999765443 35666543
No 94
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=53.68 E-value=5.4 Score=31.06 Aligned_cols=33 Identities=3% Similarity=-0.009 Sum_probs=25.1
Q ss_pred ChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 95 DPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 95 d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
.....|+.+|+++||++||+++++++ .|++++.
T Consensus 135 ~~~~~La~~Aa~~AL~~agi~~~dId----~li~~t~ 167 (413)
T 3v7i_A 135 EAVQAYGERAARGALQIAGLDVADVD----CLITSNS 167 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCC----EEEEECC
T ss_pred cCHHHHHHHHHHHHHHHhCcCHHHCC----EEEEEcc
Confidence 34667899999999999999876554 4666644
No 95
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=51.66 E-value=5 Score=31.80 Aligned_cols=35 Identities=11% Similarity=0.253 Sum_probs=25.6
Q ss_pred cChHHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEcccc
Q psy11963 94 MDPQLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLMT 132 (172)
Q Consensus 94 ~d~~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~~ 132 (172)
......|+.+|+++||++||+++++++ .|++++..
T Consensus 107 ~~~a~~La~~Aa~~AL~~agi~~~dId----~li~~t~t 141 (465)
T 3e1h_A 107 MSDGVPLAVEASRKAMAEARLVPAQIT----HMVSTTCT 141 (465)
T ss_dssp HHHTHHHHHHHHHHHHHHHTCCGGGCC----EEEEECSS
T ss_pred HhhHHHHHHHHHHHHHHHcCCCHHHCC----EEEEEeeC
Confidence 334568999999999999999876554 35666543
No 96
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=49.12 E-value=7.6 Score=29.45 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+.+|+++||+++|+++++++ .|++++.
T Consensus 54 ~~~La~~Aa~~aL~~ag~~~~dId----~vi~~t~ 84 (357)
T 3s3l_A 54 PPRMAARAARAALGRGDVDPADVS----LVLHSSL 84 (357)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEec
Confidence 467889999999999999765443 3566654
No 97
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=48.30 E-value=7.4 Score=30.89 Aligned_cols=31 Identities=3% Similarity=0.083 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCcceEEEccc
Q psy11963 97 QLRMLLELTHESIMDGGFNPEELRGTRTGVYIGLM 131 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~~~~~~r~gv~vG~~ 131 (172)
...|+.+|+++||+++|+++++++ .|++|+.
T Consensus 73 ~~~La~~Aa~~aL~~agi~~~dId----~li~~T~ 103 (478)
T 2p8u_A 73 INSLCMTVVQNLMERNNLSYDCIG----RLEVGTE 103 (478)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEE----EEEEECS
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCC----EEEEEcc
Confidence 467899999999999999764332 3555544
No 98
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=47.82 E-value=9.4 Score=29.98 Aligned_cols=21 Identities=10% Similarity=0.177 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCC
Q psy11963 97 QLRMLLELTHESIMDGGFNPE 117 (172)
Q Consensus 97 ~~~~~l~aa~eAl~dAG~~~~ 117 (172)
...++.+|+++||+++|++++
T Consensus 52 ~~~La~~Aa~~aL~~agi~~~ 72 (450)
T 2f82_A 52 VISMSFNAVTSLLEKYKIDPK 72 (450)
T ss_dssp HHHHHHHHHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHcCcCHH
Confidence 467899999999999998754
No 99
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=47.18 E-value=6.6 Score=30.93 Aligned_cols=30 Identities=13% Similarity=0.131 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCCCCCcce-EEEcccc
Q psy11963 98 LRMLLELTHESIMDGGFNPEELRGTRTG-VYIGLMT 132 (172)
Q Consensus 98 ~~~~l~aa~eAl~dAG~~~~~~~~~r~g-v~vG~~~ 132 (172)
.-|+..|+++||+++|+++++ ++ |++++..
T Consensus 55 ~~ma~~Aa~~al~~a~i~~~~-----Id~ii~aT~t 85 (460)
T 2wya_A 55 NSLCLTVVQRLMERIQLPWDS-----VGRLEVGTET 85 (460)
T ss_dssp HHHHHHHHHHHHHHHTCCGGG-----EEEEEEECSC
T ss_pred HHHHHHHHHHHHHHcCCCHHH-----CCEEEEEeCC
Confidence 458999999999999997654 44 5666543
No 100
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=45.57 E-value=6.3 Score=36.74 Aligned_cols=27 Identities=22% Similarity=0.356 Sum_probs=22.5
Q ss_pred CCCCCC-CCC----CCCCcceEEEeeecCccc
Q psy11963 1 MDGGFN-PEE----LRGTRTGVYIGLMTTEAN 27 (172)
Q Consensus 1 ~~ag~~-~~~----~~~~~~~V~vg~~~~~~~ 27 (172)
+|||++ |.. ++++++||++|....++.
T Consensus 1199 ~~AGi~~p~e~~~~i~~s~vGv~vGsg~gg~~ 1230 (1878)
T 2uv9_A 1199 LSSGITDPYEFYKYVHLSEVGNCIGSGVGGTS 1230 (1878)
T ss_dssp HTTTCSSGGGHHHHSCGGGEEEEEEESSCCHH
T ss_pred HHCCCCChhhhhcccCccceEEEEccCCccHH
Confidence 589998 777 899999999998777643
No 101
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=28.29 E-value=13 Score=34.14 Aligned_cols=26 Identities=19% Similarity=0.270 Sum_probs=21.6
Q ss_pred CCCCCC-CCC----CCCCcceEEEeeecCcc
Q psy11963 1 MDGGFN-PEE----LRGTRTGVYIGLMTTEA 26 (172)
Q Consensus 1 ~~ag~~-~~~----~~~~~~~V~vg~~~~~~ 26 (172)
||||++ |.. ++++++||++|....++
T Consensus 1025 edAGI~dP~ei~~~i~~s~vGV~vGSg~Gg~ 1055 (1688)
T 2pff_A 1025 IASGITDPYEMYKYVHVSEVGNCSGSGMGGV 1055 (1688)
T ss_dssp TTTTCSSGGGGGGGTCCSCSCCCCCCCSCCC
T ss_pred HHcCCCChHHhccccCCceEEEEecccCCCH
Confidence 689998 776 89999999999766653
No 102
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=25.74 E-value=22 Score=35.10 Aligned_cols=25 Identities=24% Similarity=0.400 Sum_probs=21.3
Q ss_pred CCCCCCCCCC----CCCcceEEEeeecCc
Q psy11963 1 MDGGFNPEEL----RGTRTGVYIGLMTTE 25 (172)
Q Consensus 1 ~~ag~~~~~~----~~~~~~V~vg~~~~~ 25 (172)
||||++++.+ .++++||++|+...+
T Consensus 2660 edAGi~p~~l~~~~~~~~vGV~vG~~~gg 2688 (3089)
T 3zen_D 2660 LSSGFTPTELMRWVHPSQVASTQGTGMGG 2688 (3089)
T ss_dssp TTSCSCGGGHHHHSCGGGEEEEEEESSCC
T ss_pred HHcCCCHHHhhcccCcceeEEEEeecCcc
Confidence 7999999987 689999999987544
Done!