Query psy11966
Match_columns 99
No_of_seqs 123 out of 1143
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 23:31:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11966.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11966hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vz8_A Fatty acid synthase; tr 99.9 6.1E-26 2.1E-30 188.2 11.3 99 1-99 127-225 (2512)
2 3hhd_A Fatty acid synthase; tr 99.9 4.7E-24 1.6E-28 166.4 9.5 98 2-99 130-227 (965)
3 2vba_A 3-oxoacyl-[acyl-carrier 99.9 5.1E-24 1.7E-28 153.1 7.2 97 2-99 130-232 (406)
4 2iwz_A 3-oxoacyl-[acyl-carrier 99.9 4.1E-23 1.4E-27 149.8 10.4 98 2-99 155-256 (438)
5 1ox0_A Beta ketoacyl-acyl carr 99.9 5.1E-23 1.7E-27 148.9 10.2 98 2-99 150-251 (430)
6 1e5m_A KAS II, beta ketoacyl a 99.9 4.1E-23 1.4E-27 148.7 9.2 98 2-99 134-236 (416)
7 4ewg_A Beta-ketoacyl synthase; 99.9 5.7E-23 1.9E-27 147.9 9.3 97 2-99 135-236 (412)
8 3mqd_A Beta-ketoacyl synthase; 99.9 5.5E-23 1.9E-27 148.7 8.9 97 2-99 149-251 (428)
9 2gqd_A 3-oxoacyl-[acyl-carrier 99.9 9.5E-23 3.2E-27 147.8 10.1 98 2-99 155-256 (437)
10 1tqy_B Actinorhodin polyketide 99.9 1.2E-22 4E-27 146.3 9.6 97 2-99 136-236 (415)
11 2gp6_A 3-oxoacyl-[acyl-carrier 99.9 2.1E-22 7.2E-27 146.0 9.8 98 2-99 154-257 (434)
12 2hg4_A DEBS, 6-deoxyerythronol 99.9 9.5E-23 3.2E-27 158.5 8.5 97 3-99 167-263 (917)
13 2qo3_A Eryaii erythromycin pol 99.9 1.3E-22 4.5E-27 157.6 9.1 98 2-99 144-241 (915)
14 3o04_A LMO2201 protein, beta-k 99.9 2.5E-22 8.6E-27 144.4 9.9 98 2-99 131-232 (413)
15 1tqy_A Beta-ketoacyl synthase/ 99.9 1.4E-22 4.6E-27 146.3 8.3 97 3-99 133-238 (424)
16 1j3n_A 3-oxoacyl-(acyl-carrier 99.9 1.5E-22 5.2E-27 145.3 8.4 98 2-99 128-230 (408)
17 3ho9_A 3-oxoacyl-[acyl-carrier 99.9 8.8E-23 3E-27 147.5 7.2 98 2-99 145-247 (427)
18 3kzu_A 3-oxoacyl-(acyl-carrier 99.9 6.3E-22 2.2E-26 143.2 11.3 99 1-99 144-248 (428)
19 2wge_A 3-oxoacyl-[acyl-carrier 99.9 3.9E-22 1.3E-26 143.8 9.4 98 2-99 138-240 (416)
20 2ix4_A 3-oxoacyl-[acyl-carrier 99.9 4.4E-22 1.5E-26 144.1 9.4 98 2-99 146-249 (431)
21 4ddo_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-21 4.2E-26 142.4 9.6 98 2-99 160-263 (451)
22 2uv9_A Fatty acid synthase alp 99.8 1E-20 3.4E-25 153.7 10.0 97 2-99 1246-1354(1878)
23 2uv8_A Fatty acid synthase sub 99.8 1.1E-20 3.7E-25 153.6 9.3 97 2-99 1271-1379(1887)
24 2pff_A Fatty acid synthase sub 99.8 1.2E-20 4E-25 151.0 3.4 97 2-99 1072-1180(1688)
25 3zen_D Fatty acid synthase; tr 99.8 9.2E-19 3.1E-23 146.9 9.6 93 6-99 2710-2814(3089)
26 1wl4_A Acetyl-coenzyme A acety 99.5 1.1E-14 3.9E-19 104.2 2.1 55 12-66 67-123 (397)
27 1wdk_C 3-ketoacyl-COA thiolase 99.4 8.1E-13 2.8E-17 94.4 5.9 55 12-66 69-125 (390)
28 2iik_A 3-ketoacyl-COA thiolase 99.3 1.7E-11 6E-16 88.4 7.7 55 13-67 93-149 (418)
29 2ib8_A Acetyl-COA acetyltransf 99.2 5.8E-11 2E-15 84.8 6.5 56 11-66 68-125 (395)
30 2vu1_A Acetyl-COA acetyltransf 99.1 4.6E-11 1.6E-15 85.3 5.7 56 12-67 64-121 (392)
31 1ulq_A Putative acetyl-COA ace 99.1 1.3E-10 4.3E-15 83.4 6.4 56 12-67 64-121 (401)
32 2ebd_A 3-oxoacyl-[acyl-carrier 99.1 1.3E-10 4.3E-15 80.1 6.0 52 14-65 89-141 (309)
33 3s21_A 3-oxoacyl-[ACP] synthas 99.1 2.8E-11 9.7E-16 85.1 2.6 84 13-99 106-191 (345)
34 2wu9_A 3-ketoacyl-COA thiolase 99.1 1.9E-10 6.4E-15 83.7 6.5 55 13-67 94-150 (442)
35 1afw_A 3-ketoacetyl-COA thiola 99.1 2.6E-10 8.9E-15 81.6 6.5 55 12-66 76-132 (393)
36 1zow_A 3-oxoacyl-[acyl-carrier 99.0 9.6E-11 3.3E-15 80.9 3.6 53 13-65 89-142 (313)
37 1hnj_A Beta-ketoacyl-acyl carr 99.0 5.9E-10 2E-14 77.1 6.7 53 13-65 89-142 (317)
38 1ub7_A 3-oxoacyl-[acyl-carrier 99.0 7.4E-10 2.5E-14 76.8 6.2 52 14-65 89-140 (322)
39 1u6e_A 3-oxoacyl-[acyl-carrier 99.0 7.3E-10 2.5E-14 77.1 5.8 53 13-65 99-152 (335)
40 3goa_A 3-ketoacyl-COA thiolase 98.9 2.4E-09 8.1E-14 76.5 7.1 57 12-68 66-124 (387)
41 1u0m_A Putative polyketide syn 98.9 1E-09 3.4E-14 78.1 4.8 53 13-65 121-176 (382)
42 1mzj_A Beta-ketoacylsynthase I 98.9 1.6E-09 5.5E-14 75.7 5.6 52 14-65 99-151 (339)
43 4e1l_A Acetoacetyl-COA thiolas 98.9 3.5E-09 1.2E-13 75.6 7.2 59 12-70 66-126 (395)
44 2x3e_A 3-oxoacyl-[acyl-carrier 98.9 2.9E-09 1E-13 74.2 5.8 52 14-65 90-142 (331)
45 3ss6_A Acetyl-COA acetyltransf 98.9 3.8E-09 1.3E-13 75.5 6.0 56 12-67 66-123 (394)
46 4dd5_A Acetyl-COA acetyltransf 98.9 4.7E-09 1.6E-13 75.1 6.3 56 12-67 68-125 (396)
47 3svk_A Acetyl-COA acetyltransf 98.8 2.7E-09 9.1E-14 76.8 3.2 56 12-67 71-128 (407)
48 4egv_A Acetyl-COA acetyltransf 98.8 1.2E-08 4.2E-13 75.5 6.5 61 11-71 90-151 (520)
49 2h84_A Steely1; thiolase-fold, 98.7 1.8E-08 6E-13 71.3 6.2 54 13-66 132-188 (374)
50 4dfe_A 3-oxoacyl-[acyl-carrier 98.7 3.8E-08 1.3E-12 68.8 5.7 54 13-66 103-158 (333)
51 1ted_A PKS18; thiolase fold, s 98.5 1.3E-07 4.6E-12 67.4 6.2 54 13-66 150-206 (393)
52 2d3m_A Pentaketide chromone sy 98.5 2.1E-07 7E-12 66.7 6.7 54 13-66 152-208 (406)
53 3led_A 3-oxoacyl-acyl carrier 98.5 1.9E-07 6.5E-12 66.9 5.8 53 13-65 155-207 (392)
54 3a5r_A Benzalacetone synthase; 98.5 3E-07 1E-11 65.5 6.7 54 13-66 135-191 (387)
55 3il3_A 3-oxoacyl-[acyl-carrier 98.5 2.4E-07 8.3E-12 64.6 5.9 54 13-66 96-150 (323)
56 1xpm_A 3-hydroxy-3-methylgluta 98.5 1.9E-07 6.6E-12 66.8 5.4 52 13-64 87-140 (396)
57 1xes_A Dihydropinosylvin synth 98.5 3.3E-07 1.1E-11 66.0 6.5 54 13-66 162-218 (413)
58 3il6_A 3-oxoacyl-[acyl-carrier 98.5 3.9E-07 1.3E-11 63.5 6.5 54 13-66 90-144 (321)
59 1i88_A CHS2, chalcone synthase 98.4 4E-07 1.4E-11 64.9 6.5 54 13-66 139-195 (389)
60 4efi_A 3-oxoacyl-(acyl-carrier 98.4 4.3E-07 1.5E-11 64.1 6.3 54 13-66 104-159 (354)
61 3awk_A Chalcone synthase-like 98.4 6.4E-07 2.2E-11 64.2 7.1 55 13-67 152-209 (402)
62 3gwa_A 3-oxoacyl-(acyl-carrier 98.4 4.7E-07 1.6E-11 64.1 6.1 55 13-67 118-174 (365)
63 3h78_A PQS biosynthetic enzyme 98.4 5.3E-07 1.8E-11 63.8 6.3 54 13-66 112-166 (359)
64 2p0u_A Stilbenecarboxylate syn 98.4 6.9E-07 2.4E-11 64.3 6.8 54 13-66 157-213 (413)
65 3tsy_A Fusion protein 4-coumar 98.4 6.3E-07 2.1E-11 69.9 6.6 54 12-65 725-781 (979)
66 1ee0_A 2-pyrone synthase; poly 98.4 6.4E-07 2.2E-11 64.1 5.8 53 13-65 144-199 (402)
67 3s3l_A CERJ; acyltransferase, 98.3 1.5E-06 5.3E-11 61.3 6.8 54 13-66 93-149 (357)
68 3oit_A OS07G0271500 protein; t 98.2 2.6E-06 9E-11 60.8 6.7 54 13-66 133-189 (387)
69 3ov2_A Curcumin synthase; type 98.2 2.3E-06 7.8E-11 61.3 6.3 55 12-66 138-195 (393)
70 3v4n_A HMG-COA synthase; hydro 98.2 3.8E-06 1.3E-10 60.1 6.0 54 13-66 92-147 (388)
71 2f82_A HMG-COA synthase; HMGS1 98.1 3.4E-06 1.2E-10 61.3 5.7 54 12-65 89-148 (450)
72 3v7i_A Putative polyketide syn 98.1 6.3E-06 2.2E-10 59.5 6.3 54 13-66 174-230 (413)
73 3sqz_A Putative hydroxymethylg 98.0 8.7E-06 3E-10 59.0 5.7 55 13-67 121-177 (425)
74 3lma_A Stage V sporulation pro 98.0 1.6E-05 5.6E-10 56.3 6.0 53 14-68 91-143 (347)
75 3euo_A Type III pentaketide sy 97.9 2.7E-05 9.1E-10 55.4 6.8 55 12-66 117-178 (379)
76 4ewp_A 3-oxoacyl-[acyl-carrier 97.9 3.1E-05 1.1E-09 54.1 6.5 54 12-65 99-153 (350)
77 3e1h_A PKSIIINC, putative unch 97.7 8.5E-05 2.9E-09 54.4 6.8 55 12-66 146-207 (465)
78 2p8u_A Hydroxymethylglutaryl-C 97.6 0.00012 4E-09 53.7 5.6 52 13-64 111-168 (478)
79 2v4w_A Hydroxymethylglutaryl-C 97.4 0.00019 6.4E-09 52.6 5.3 53 13-65 92-150 (460)
80 2wya_A Hydroxymethylglutaryl-C 94.9 0.023 7.9E-07 41.2 3.7 50 13-62 92-147 (460)
81 2af4_C Phosphate acetyltransfe 50.0 29 0.00099 23.9 4.7 39 41-80 104-142 (333)
82 1vmi_A Putative phosphate acet 42.0 36 0.0012 23.8 4.2 39 41-80 115-153 (355)
83 3uf6_A LMO1369 protein; struct 40.7 26 0.0009 23.9 3.3 23 40-62 73-95 (291)
84 2jtq_A Phage shock protein E; 39.9 38 0.0013 17.8 3.4 34 31-64 44-77 (85)
85 4e4r_A Phosphate acetyltransfe 35.1 57 0.002 22.6 4.3 36 44-80 111-146 (331)
86 3tma_A Methyltransferase; thum 31.5 64 0.0022 21.9 4.1 40 9-48 186-225 (354)
87 1r5j_A Putative phosphotransac 30.0 83 0.0028 21.5 4.5 41 40-81 112-152 (337)
88 2ozz_A Hypothetical protein YH 29.7 38 0.0013 22.3 2.6 18 43-60 55-72 (231)
89 3k0b_A Predicted N6-adenine-sp 29.6 77 0.0026 22.2 4.3 39 10-48 185-223 (393)
90 1vi1_A Fatty acid/phospholipid 28.5 46 0.0016 23.1 3.0 21 41-61 81-101 (345)
91 4a3u_A NCR, NADH\:flavin oxido 27.9 45 0.0015 23.2 2.8 55 42-97 297-351 (358)
92 3del_B Arginine binding protei 27.2 55 0.0019 20.0 3.0 18 42-59 147-164 (242)
93 3oiz_A Antisigma-factor antago 27.1 68 0.0023 17.5 3.1 28 34-61 57-84 (99)
94 1u7n_A Fatty acid/phospholipid 27.0 43 0.0015 23.1 2.6 21 41-61 81-101 (336)
95 3h7m_A Sensor protein; histidi 26.1 60 0.0021 19.6 3.0 19 42-60 147-165 (234)
96 3gka_A N-ethylmaleimide reduct 26.0 56 0.0019 22.9 3.1 74 15-97 279-352 (361)
97 4f3p_A Glutamine-binding perip 25.6 61 0.0021 20.1 3.0 20 42-61 160-179 (249)
98 1td9_A Phosphate acetyltransfe 25.4 62 0.0021 22.2 3.2 39 40-79 110-148 (329)
99 3kzg_A Arginine 3RD transport 24.9 64 0.0022 19.7 3.0 19 42-60 140-158 (237)
100 4eq9_A ABC transporter substra 24.8 65 0.0022 19.6 3.0 20 42-61 151-170 (246)
101 3i6v_A Periplasmic His/Glu/Gln 24.4 67 0.0023 19.7 3.0 20 42-61 134-153 (232)
102 1ii5_A SLR1257 protein; membra 24.2 70 0.0024 19.2 3.1 19 42-60 144-162 (233)
103 2y7i_A STM4351; arginine-bindi 24.1 71 0.0024 19.2 3.1 20 42-61 142-161 (229)
104 3ldg_A Putative uncharacterize 24.0 1.1E+02 0.0037 21.5 4.3 39 10-48 178-216 (384)
105 4dgh_A Sulfate permease family 24.0 95 0.0033 17.6 3.5 41 34-79 62-102 (130)
106 3lxy_A 4-hydroxythreonine-4-ph 23.7 69 0.0024 22.4 3.1 30 34-63 97-126 (334)
107 4ab4_A Xenobiotic reductase B; 23.2 62 0.0021 22.6 2.9 73 15-96 271-343 (362)
108 4h5g_A Amino acid ABC superfam 23.1 67 0.0023 20.0 2.8 18 43-60 154-171 (243)
109 1lst_A Lysine, arginine, ornit 22.5 79 0.0027 19.2 3.1 20 42-61 143-162 (239)
110 3k4u_A Binding component of AB 22.5 65 0.0022 19.8 2.7 20 42-61 145-164 (245)
111 2r14_A Morphinone reductase; H 22.3 73 0.0025 22.3 3.1 74 15-97 291-364 (377)
112 1di0_A Lumazine synthase; tran 22.3 81 0.0028 19.5 3.0 18 46-63 62-79 (158)
113 2q5c_A NTRC family transcripti 22.2 1.1E+02 0.0038 19.2 3.7 39 11-51 148-186 (196)
114 1wdn_A GLNBP, glutamine bindin 22.0 83 0.0028 18.7 3.1 19 42-60 139-157 (226)
115 3qax_A Probable ABC transporte 21.8 79 0.0027 19.5 3.0 18 42-59 168-185 (268)
116 3hv1_A Polar amino acid ABC up 21.8 73 0.0025 19.9 2.8 21 42-62 164-184 (268)
117 3llo_A Prestin; STAS domain, c 21.8 1E+02 0.0035 17.8 3.3 43 34-81 77-119 (143)
118 3mpk_A Virulence sensor protei 21.5 74 0.0025 20.1 2.8 19 42-60 169-187 (267)
119 2b99_A Riboflavin synthase; lu 21.4 79 0.0027 19.6 2.8 20 44-63 48-67 (156)
120 1rvv_A Riboflavin synthase; tr 21.2 89 0.003 19.3 3.0 18 46-63 64-81 (154)
121 4dz1_A DALS D-alanine transpor 21.0 77 0.0026 19.8 2.8 20 42-61 173-192 (259)
122 2obx_A DMRL synthase 1, 6,7-di 21.0 81 0.0028 19.5 2.8 18 46-63 63-80 (157)
123 4i62_A Amino acid ABC transpor 21.0 84 0.0029 19.4 3.0 19 42-60 180-198 (269)
124 1yxo_A 4-hydroxythreonine-4-ph 21.0 1.2E+02 0.004 21.2 3.8 30 35-64 93-122 (328)
125 2pyy_A Ionotropic glutamate re 20.7 89 0.0031 18.6 3.0 19 42-60 140-158 (228)
126 3tql_A Arginine-binding protei 20.6 69 0.0023 19.1 2.4 18 42-59 140-157 (227)
127 2hi1_A 4-hydroxythreonine-4-ph 20.2 1.2E+02 0.0042 21.1 3.8 29 36-64 101-129 (330)
128 1q14_A HST2 protein; histone d 20.0 1.5E+02 0.005 20.8 4.2 34 39-72 197-238 (361)
No 1
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.93 E-value=6.1e-26 Score=188.22 Aligned_cols=99 Identities=41% Similarity=0.669 Sum_probs=96.0
Q ss_pred CCcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 1 MTQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
+++|.++++..+++++|||+.||++||+++|++||+||+.||++|+++|++|++|++||||++.+++|..+..|.+++.+
T Consensus 127 ~~~~~~~g~~~~~~a~ris~~~~l~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~~~l 206 (2512)
T 2vz8_A 127 LVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGML 206 (2512)
T ss_dssp SCGGGGGGTSTTHHHHHHHHHHTCCSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHTTCB
T ss_pred cCcceecccchhHHHHHHHHHhCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccCCCC
Confidence 35788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccCCCCCceeCC
Q psy11966 81 SPTGTISPFDASGVGHRQP 99 (99)
Q Consensus 81 s~~~~~~pfd~~~~G~v~g 99 (99)
|++++|||||+++|||++|
T Consensus 207 s~~g~c~~Fd~~adG~~~g 225 (2512)
T 2vz8_A 207 SQDGTCRSFDAEGTGYCRA 225 (2512)
T ss_dssp CTTCSCCSSSTTCCCBCBB
T ss_pred CCCCCCCCCCCCCCCccee
Confidence 9999999999999999986
No 2
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A
Probab=99.90 E-value=4.7e-24 Score=166.40 Aligned_cols=98 Identities=40% Similarity=0.660 Sum_probs=93.5
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+++.++++..++++++|++.||++||+++|+++|+|++.||++|+++|++|++|++||||+|.++++..+..+.+++.++
T Consensus 130 ~~~~~~g~~~~~~a~ris~~lgl~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~~~ls 209 (965)
T 3hhd_A 130 VGYSMVGCQRAMMANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLS 209 (965)
T ss_dssp CTHHHHHHSTTHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHHTCBC
T ss_pred CcccccccccchHHHHHHHHhCCCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcC
Confidence 45667777889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCceeCC
Q psy11966 82 PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~~~~~~pfd~~~~G~v~g 99 (99)
+++.|+|||.+++||++|
T Consensus 210 ~~g~~~~Fd~~adG~~~g 227 (965)
T 3hhd_A 210 PEGTCKAFDTAGNGYCRS 227 (965)
T ss_dssp TTCCCCTTBTTCCSBCBB
T ss_pred CCCccccchhccCCcccc
Confidence 999999999999999875
No 3
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...
Probab=99.90 E-value=5.1e-24 Score=153.15 Aligned_cols=97 Identities=20% Similarity=0.268 Sum_probs=89.0
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.++++..+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.+.++..+. |..++.++
T Consensus 130 ~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~~~ls 208 (406)
T 2vba_A 130 GPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAMGALS 208 (406)
T ss_dssp CTTHHHHHSTTHHHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHTTCBC
T ss_pred ChhhhhhhhhHHHHHHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-Hhhccccc
Confidence 45666677788999999999999999999999999999999999999999999999999999988887777 99999998
Q ss_pred ------CCCCCcccCCCCCceeCC
Q psy11966 82 ------PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ------~~~~~~pfd~~~~G~v~g 99 (99)
|++.|||||++++|+++|
T Consensus 209 ~~~~~~p~~~~~pfd~~~~G~v~g 232 (406)
T 2vba_A 209 TKYNDTPEKASRTYDAHRDGFVIA 232 (406)
T ss_dssp CSCTTSGGGSCCTTBTTCCSBCBB
T ss_pred cccCCCCccccCcCcCCCCceEee
Confidence 567999999999999985
No 4
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A
Probab=99.89 E-value=4.1e-23 Score=149.78 Aligned_cols=98 Identities=21% Similarity=0.308 Sum_probs=91.4
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++.++
T Consensus 155 ~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls 234 (438)
T 2iwz_A 155 SPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRARALS 234 (438)
T ss_dssp CTTHHHHTCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred ChhhhhhhhhhHHHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhcCCcC
Confidence 45666777888999999999999999999999999999999999999999999999999999988999889999999998
Q ss_pred C----CCCCcccCCCCCceeCC
Q psy11966 82 P----TGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~----~~~~~pfd~~~~G~v~g 99 (99)
+ ++.|+|||++++|+++|
T Consensus 235 ~~~~p~~~~~pfd~~~~G~~~g 256 (438)
T 2iwz_A 235 TNSDPKLACRPFHPKRDGFVMG 256 (438)
T ss_dssp CCSCTTTSCCTTCTTCCSBCBB
T ss_pred CCCCCCcccccCCCCCCCEEee
Confidence 6 78999999999999875
No 5
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A
Probab=99.89 E-value=5.1e-23 Score=148.86 Aligned_cols=98 Identities=27% Similarity=0.348 Sum_probs=91.8
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++.++
T Consensus 150 ~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls 229 (430)
T 1ox0_A 150 KPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQALTALS 229 (430)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred ChhhhhccchhHHHHHHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhCCCcc
Confidence 45677777888999999999999999999999999999999999999999999999999999999998888999999998
Q ss_pred ----CCCCCcccCCCCCceeCC
Q psy11966 82 ----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ----~~~~~~pfd~~~~G~v~g 99 (99)
++..|+|||++++|+++|
T Consensus 230 ~~~~p~~~~~pFd~~~~g~~~g 251 (430)
T 1ox0_A 230 TTEDPTRASIPFDKDRNGFVMG 251 (430)
T ss_dssp CCSSTTSSSCTTBTTCCSBCBC
T ss_pred CCCCCCCCCCCCCCCCCCcccc
Confidence 778999999999999986
No 6
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1
Probab=99.89 E-value=4.1e-23 Score=148.72 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=90.4
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++++.+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++.++
T Consensus 134 ~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~ls 213 (416)
T 1e5m_A 134 SPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASARALS 213 (416)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred ChhHhhhhhhHHHHHHHHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcCCcc
Confidence 45666667778899999999999999999999999999999999999999999999999999988999899999999998
Q ss_pred -----CCCCCcccCCCCCceeCC
Q psy11966 82 -----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 -----~~~~~~pfd~~~~G~v~g 99 (99)
|++.|||||++++|+++|
T Consensus 214 ~~~~~p~~~~rpfd~~~~G~v~g 236 (416)
T 1e5m_A 214 FRNDDPLHASRPFDKDRDGFVMG 236 (416)
T ss_dssp CCTTCGGGTCCTTBTTCCSBCBB
T ss_pred CCCCCCccccccCccCCCCceee
Confidence 467899999999999975
No 7
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}
Probab=99.89 E-value=5.7e-23 Score=147.86 Aligned_cols=97 Identities=23% Similarity=0.217 Sum_probs=90.3
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|. +++.....|..++.++
T Consensus 135 ~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~~~~~~~l~ 213 (412)
T 4ewg_A 135 TSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAVFDTLYATS 213 (412)
T ss_dssp CTTHHHHHSTTHHHHHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHTTTCBC
T ss_pred ChhhhhhhcccHHHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHHHHHhhccc
Confidence 456667778889999999999999999999999999999999999999999999999999999 8999999999999998
Q ss_pred C-----CCCCcccCCCCCceeCC
Q psy11966 82 P-----TGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~-----~~~~~pfd~~~~G~v~g 99 (99)
+ ++.|||||++++|+++|
T Consensus 214 ~~~~~p~~~~rpfd~~~~G~~~g 236 (412)
T 4ewg_A 214 TRNDEPHLTPRPFDAKRDGLVVG 236 (412)
T ss_dssp CCTTCGGGCCCTTBTTCCCBCBB
T ss_pred cCCCCCCCCCCCCCCCCCCCceE
Confidence 6 68999999999999875
No 8
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*
Probab=99.88 E-value=5.5e-23 Score=148.69 Aligned_cols=97 Identities=20% Similarity=0.327 Sum_probs=88.3
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|. +++.....|..++.++
T Consensus 149 ~~~~~~~~~~~~~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~~~ls 227 (428)
T 3mqd_A 149 GPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAMGAMS 227 (428)
T ss_dssp CTTCHHHHSTTHHHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCBC
T ss_pred CchhhccccccHHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHhhhhc
Confidence 567777888899999999999999999999999999999999999999999999999999999 5666667789999888
Q ss_pred ------CCCCCcccCCCCCceeCC
Q psy11966 82 ------PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ------~~~~~~pfd~~~~G~v~g 99 (99)
+++.|||||++++|+++|
T Consensus 228 ~~~~~~p~~~~rpfd~~~~G~v~g 251 (428)
T 3mqd_A 228 SKYNDTPSTASRAYDKNRDGFVIA 251 (428)
T ss_dssp CTTTTSGGGSCCTTBTTCCSBCBB
T ss_pred ccccCCcccccCcccCCCCCcccc
Confidence 457899999999999875
No 9
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}
Probab=99.88 E-value=9.5e-23 Score=147.82 Aligned_cols=98 Identities=20% Similarity=0.241 Sum_probs=90.6
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++.++
T Consensus 155 ~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls 234 (437)
T 2gqd_A 155 SPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSASRALS 234 (437)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred ChHHhhhcchhHHHHHHHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccCcc
Confidence 45566666778899999999999999999999999999999999999999999999999999989999999999999998
Q ss_pred ----CCCCCcccCCCCCceeCC
Q psy11966 82 ----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ----~~~~~~pfd~~~~G~v~g 99 (99)
|++.|+|||++++|+++|
T Consensus 235 ~~~~p~~~~~pfd~~~~G~v~g 256 (437)
T 2gqd_A 235 TNDDIETACRPFQEGRDGFVMG 256 (437)
T ss_dssp CCCCTTTSSCTTCTTCCSBCBB
T ss_pred CCCCCccccCCCCCCCCCceee
Confidence 567899999999999975
No 10
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.88 E-value=1.2e-22 Score=146.27 Aligned_cols=97 Identities=22% Similarity=0.211 Sum_probs=92.0
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++.+|++.||++||+++|+++|+|++.||.+|+++|++| +|++||||+|.++++..+..|..++.++
T Consensus 136 ~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~~~ls 214 (415)
T 1tqy_B 136 SVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIASGRIS 214 (415)
T ss_dssp CTTHHHHSSTTHHHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTTSCBC
T ss_pred ChhhhhcccchHHHHHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhccCcc
Confidence 566777788899999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred ----CCCCCcccCCCCCceeCC
Q psy11966 82 ----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ----~~~~~~pfd~~~~G~v~g 99 (99)
+++.++|||++++|+++|
T Consensus 215 ~~~~~~~~~~pfd~~~~G~~~g 236 (415)
T 1tqy_B 215 TATDPDRAYLPFDERAAGYVPG 236 (415)
T ss_dssp CCSCGGGSCCTTSTTCCCBCBB
T ss_pred CCCCCCCCcCCCCCCCCCccee
Confidence 888999999999999875
No 11
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}
Probab=99.88 E-value=2.1e-22 Score=146.00 Aligned_cols=98 Identities=23% Similarity=0.248 Sum_probs=90.9
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHcc-CC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYN-ML 80 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~-~l 80 (99)
+|+.+++++.+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.+..+..+..+..++ .+
T Consensus 154 ~p~~~~~~~~~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~~l 233 (434)
T 2gp6_A 154 SPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAGFAQMRIVM 233 (434)
T ss_dssp CTTHHHHHSTTHHHHHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHHHHTTTSSC
T ss_pred ChhhhhccchhhHHHHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHHHHHh
Confidence 45667777888999999999999999999999999999999999999999999999999999999998889999999 88
Q ss_pred C-----CCCCCcccCCCCCceeCC
Q psy11966 81 S-----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 81 s-----~~~~~~pfd~~~~G~v~g 99 (99)
+ +++.|+|||++++|+++|
T Consensus 234 s~~~~~p~~~~~pfd~~~~g~v~g 257 (434)
T 2gp6_A 234 STNNDDPAGACRPFDRDRDGFVFG 257 (434)
T ss_dssp CCCTTCTTTSCCSSBTTCCCCCBB
T ss_pred cCCCCCCCCceecccccCCCccee
Confidence 7 678999999999999875
No 12
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}
Probab=99.88 E-value=9.5e-23 Score=158.46 Aligned_cols=97 Identities=31% Similarity=0.504 Sum_probs=91.1
Q ss_pred cccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCCC
Q psy11966 3 QFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLSP 82 (99)
Q Consensus 3 ~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls~ 82 (99)
++.++++..+.++++|++.||++||+++|+++|+|++.||++|+++|++|++|++||||+|.+.++..+..|..++.+++
T Consensus 167 ~~~~~g~~~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~~~ls~ 246 (917)
T 2hg4_A 167 GYVGTGTASSVASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQGGLAA 246 (917)
T ss_dssp GGHHHHHCHHHHHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTSSCBCT
T ss_pred cccccccccchHHHHHHHhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhccCcCC
Confidence 45556667788999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred CCCCcccCCCCCceeCC
Q psy11966 83 TGTISPFDASGVGHRQP 99 (99)
Q Consensus 83 ~~~~~pfd~~~~G~v~g 99 (99)
++.|+|||+++||+++|
T Consensus 247 ~g~~~pFd~~adG~~~g 263 (917)
T 2hg4_A 247 DGRCKPFSKAADGFGLA 263 (917)
T ss_dssp TSCCCTTBTTCCCBCBB
T ss_pred ccccCcccccccCCCCc
Confidence 99999999999999985
No 13
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}
Probab=99.88 E-value=1.3e-22 Score=157.63 Aligned_cols=98 Identities=29% Similarity=0.492 Sum_probs=92.8
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+++.+++...+.++++|++.||++||+++|+++|+|++.||++|+++|++|++|++||||+|.+.++..+..|..++.++
T Consensus 144 ~~~~~~g~~~~~~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls 223 (915)
T 2qo3_A 144 EGYSVTGVAPAVASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALA 223 (915)
T ss_dssp TCHHHHTTCHHHHHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBC
T ss_pred cccccccccccHHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccC
Confidence 45666778888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCCceeCC
Q psy11966 82 PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~~~~~~pfd~~~~G~v~g 99 (99)
+++.|+|||++++|+++|
T Consensus 224 ~~g~~~~Fd~~adG~v~g 241 (915)
T 2qo3_A 224 ADGRSKAFGAGADGFGFS 241 (915)
T ss_dssp SSCCCCTTBTTCCCBCBB
T ss_pred CCCCcccccCCCCceeec
Confidence 999999999999999975
No 14
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}
Probab=99.88 E-value=2.5e-22 Score=144.44 Aligned_cols=98 Identities=24% Similarity=0.300 Sum_probs=92.1
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.++++..++++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++.....+..++.++
T Consensus 131 ~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~~~~~~ls 210 (413)
T 3o04_A 131 SPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALS 210 (413)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred CchhhhcccccHHHHHHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHHHhccccc
Confidence 46677777888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ----CCCCCcccCCCCCceeCC
Q psy11966 82 ----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ----~~~~~~pfd~~~~G~v~g 99 (99)
+++.++|||++++|+++|
T Consensus 211 ~~~~p~~~~~pfd~~~~g~~~g 232 (413)
T 3o04_A 211 LNPDPETACRPFDKDRDGFIIG 232 (413)
T ss_dssp CCCCTTTSCCTTBTTCCSBCBB
T ss_pred CCCCCCCCcCCCcCCCCCceEe
Confidence 677899999999999875
No 15
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1
Probab=99.87 E-value=1.4e-22 Score=146.25 Aligned_cols=97 Identities=20% Similarity=0.262 Sum_probs=86.2
Q ss_pred cccccCCCcchHHh----HHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHcc
Q psy11966 3 QFVLVAPSTPRAAK----SNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYN 78 (99)
Q Consensus 3 ~~~~~~~~~~~~~~----~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~ 78 (99)
|+.++..+++..++ +|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++
T Consensus 133 ~~~~~~~~~~~~a~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~ 212 (424)
T 1tqy_A 133 AWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAIR 212 (424)
T ss_dssp GGCCTTTHHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTT
T ss_pred hhhhcccccccccchhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHHHHhhc
Confidence 44444445554455 99999999999999999999999999999999999999999999999988999999999999
Q ss_pred CCCC-----CCCCcccCCCCCceeCC
Q psy11966 79 MLSP-----TGTISPFDASGVGHRQP 99 (99)
Q Consensus 79 ~ls~-----~~~~~pfd~~~~G~v~g 99 (99)
.+++ ++.|||||++++|+++|
T Consensus 213 ~ls~~~~~p~~~~rpfd~~~~G~v~g 238 (424)
T 1tqy_A 213 ATTARNDDPEHASRPFDGTRDGFVLA 238 (424)
T ss_dssp CBCCCCSCGGGCCCTTBTTCCCBCEE
T ss_pred cccCCCCCCCCCccCCCCCCCceeee
Confidence 9985 67899999999999875
No 16
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.87 E-value=1.5e-22 Score=145.34 Aligned_cols=98 Identities=23% Similarity=0.326 Sum_probs=90.4
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++.+.+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++.....|..++.++
T Consensus 128 ~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls 207 (408)
T 1j3n_A 128 SPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALS 207 (408)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred ChhhhhhhhhhHHHHHHHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccccc
Confidence 45666677788999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-----CCCCcccCCCCCceeCC
Q psy11966 82 P-----TGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~-----~~~~~pfd~~~~G~v~g 99 (99)
+ +..|+|||++++|+++|
T Consensus 208 ~~~~~p~~~~~pfd~~~dg~v~g 230 (408)
T 1j3n_A 208 TRNEEPEKASRPFTLSRDGFVMG 230 (408)
T ss_dssp CCTTCHHHHCCTTBTTCCCBCBB
T ss_pred CCCCCCCcCcccCcCCCCceEEe
Confidence 5 45799999999999875
No 17
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A
Probab=99.87 E-value=8.8e-23 Score=147.49 Aligned_cols=98 Identities=21% Similarity=0.291 Sum_probs=91.0
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.++++..+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.+.++..+..|..++.++
T Consensus 145 ~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~~~ls 224 (427)
T 3ho9_A 145 SPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALS 224 (427)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred CcceeccccchHHHHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhccCcc
Confidence 46667778889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred C-----CCCCcccCCCCCceeCC
Q psy11966 82 P-----TGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~-----~~~~~pfd~~~~G~v~g 99 (99)
. +..++|||++++|+++|
T Consensus 225 ~~~~~~~~~~~pfd~~~~G~v~g 247 (427)
T 3ho9_A 225 TRNDNPQAASRPWDKERDGFVLG 247 (427)
T ss_dssp CCTTCHHHHCCTTBTTCCSBCBB
T ss_pred cCCCCCCcccCCccCCCCCceee
Confidence 3 45799999999999875
No 18
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A
Probab=99.87 E-value=6.3e-22 Score=143.18 Aligned_cols=99 Identities=20% Similarity=0.272 Sum_probs=92.7
Q ss_pred CCcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 1 MTQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
++|+.+++...+..+++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++.+
T Consensus 144 ~~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~l 223 (428)
T 3kzu_A 144 ISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAACKAL 223 (428)
T ss_dssp SCTTTTTTTCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHTTCB
T ss_pred cCchhcccchhhhHHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHcccc
Confidence 35677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC------CCCcccCCCCCceeCC
Q psy11966 81 SPT------GTISPFDASGVGHRQP 99 (99)
Q Consensus 81 s~~------~~~~pfd~~~~G~v~g 99 (99)
+++ ..++|||++++|+++|
T Consensus 224 s~~~~~~~~~~~~pfd~~~~G~v~g 248 (428)
T 3kzu_A 224 STERNDDPTAASRPYDEDRDGFVMG 248 (428)
T ss_dssp CCSCTTSGGGTCCTTBTTCCSBCBB
T ss_pred ccCccCCcccccCCcccCCCceeec
Confidence 854 5899999999999875
No 19
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*
Probab=99.87 E-value=3.9e-22 Score=143.82 Aligned_cols=98 Identities=21% Similarity=0.207 Sum_probs=91.0
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+..+++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.+..+.....|..++.++
T Consensus 138 ~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~~~l~ 217 (416)
T 2wge_A 138 SPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMMRAMS 217 (416)
T ss_dssp CTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTTTCBC
T ss_pred CchhhccccchhHHHHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhcchhh
Confidence 45666777788999999999999999999999999999999999999999999999999999999998888999999998
Q ss_pred -----CCCCCcccCCCCCceeCC
Q psy11966 82 -----PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 -----~~~~~~pfd~~~~G~v~g 99 (99)
++..|+|||++++|+++|
T Consensus 218 ~~~~~~~~~~~pfd~~~dg~v~g 240 (416)
T 2wge_A 218 TRNDEPERASRPFDKDRDGFVFG 240 (416)
T ss_dssp CCTTSGGGSCCTTBTTCCCBCBB
T ss_pred ccccCCcccccccccCCCCcccc
Confidence 678999999999999875
No 20
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A
Probab=99.87 E-value=4.4e-22 Score=144.06 Aligned_cols=98 Identities=20% Similarity=0.291 Sum_probs=90.2
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.++++..+.++.+|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.++++..+..|..++.++
T Consensus 146 ~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~~~ls 225 (431)
T 2ix4_A 146 SPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRSRALS 225 (431)
T ss_dssp CTTHHHHHCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred ChhhhhcchhHHHHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhccccC
Confidence 45666667778999999999999999999999999999999999999999999999999999999999888999999998
Q ss_pred C------CCCCcccCCCCCceeCC
Q psy11966 82 P------TGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~------~~~~~pfd~~~~G~v~g 99 (99)
+ ++.++|||++++|+++|
T Consensus 226 ~~~~~~~~~~~~pfd~~~~g~~~g 249 (431)
T 2ix4_A 226 TKFNSSPQEASRPFDCDRDGFVIG 249 (431)
T ss_dssp CTTTTCGGGSCCTTBTTCCSBCBB
T ss_pred ccccCCcccccccCCCCCCCceee
Confidence 5 67899999999999875
No 21
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*
Probab=99.86 E-value=1.2e-21 Score=142.43 Aligned_cols=98 Identities=22% Similarity=0.244 Sum_probs=91.4
Q ss_pred CcccccCCCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
+|+.+++...+.++++|++.||++||+++|+++|+|++.||.+|+++|++|++|++||||+|.+.++..+..+...+.++
T Consensus 160 ~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~~~ls 239 (451)
T 4ddo_A 160 SPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAARALS 239 (451)
T ss_dssp CTTHHHHHCTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHTTCBC
T ss_pred CcchhhccccchHHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHHhhhc
Confidence 46667778889999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CC------CCCcccCCCCCceeCC
Q psy11966 82 PT------GTISPFDASGVGHRQP 99 (99)
Q Consensus 82 ~~------~~~~pfd~~~~G~v~g 99 (99)
+. ..++|||++++|+++|
T Consensus 240 ~~~~~~~~~~~~pfd~~~~g~v~g 263 (451)
T 4ddo_A 240 TGFSEEPVRASRPFDRDRDGFVMG 263 (451)
T ss_dssp CSCTTSGGGSCCTTBTTCCSBCBB
T ss_pred cCCCcCccccccccccCCCCcEEe
Confidence 65 6899999999999875
No 22
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.83 E-value=1e-20 Score=153.66 Aligned_cols=97 Identities=18% Similarity=0.261 Sum_probs=90.8
Q ss_pred CcccccCCCcchHHhHHHH-HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSP-IFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~-~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
+++.+.+++.|.++++|++ .|+++||+++++++|+|++.||+.|++.|++|++|++||||+|. +++.....|..++.+
T Consensus 1246 ~~~~~~~~~~n~~aa~vs~~~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m~al 1324 (1878)
T 2uv9_A 1246 QKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANMGAT 1324 (1878)
T ss_dssp CSCTTGGGSHHHHHHHHHHHTCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHHTCB
T ss_pred CchhhhcchHHHHHHHHHHHhcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhh
Confidence 4567778889999999999 59999999999999999999999999999999999999999999 788889999999999
Q ss_pred C-----------CCCCCcccCCCCCceeCC
Q psy11966 81 S-----------PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 81 s-----------~~~~~~pfd~~~~G~v~g 99 (99)
+ |++.|||||.+++||++|
T Consensus 1325 s~~~de~a~g~~p~~~~RPfd~~r~Gfv~g 1354 (1878)
T 2uv9_A 1325 SNAKEEFARGREPGEMSRPTSTTRNGFMES 1354 (1878)
T ss_dssp CCHHHHHTTTCCTTSSCCSSBTTCCCBCBB
T ss_pred ccchhhhhcCCCcccCcCCCccCCCCCccc
Confidence 8 678999999999999975
No 23
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.83 E-value=1.1e-20 Score=153.61 Aligned_cols=97 Identities=18% Similarity=0.262 Sum_probs=89.3
Q ss_pred CcccccCCCcchHHhHHHHH-hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSPI-FALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~~-~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
+++.+..++.|.++++|++. |+++||+++++++|+|++.||++|++.|++|++|++||||+|. +++.....|..++.+
T Consensus 1271 ~~~~~~~~~~n~~aa~is~~~lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m~al 1349 (1887)
T 2uv8_A 1271 QNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKAT 1349 (1887)
T ss_dssp CTTHHHHHSTTHHHHHHHHHTTCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHTTCB
T ss_pred CcchhhcchhhHHHHHHHHHHcCCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHhhhh
Confidence 34556667889999999994 9999999999999999999999999999999999999999999 788889999999999
Q ss_pred C-----------CCCCCcccCCCCCceeCC
Q psy11966 81 S-----------PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 81 s-----------~~~~~~pfd~~~~G~v~g 99 (99)
+ |++.|||||++++||++|
T Consensus 1350 s~~~~e~~~g~~p~~~~RPfd~~r~Gfv~g 1379 (1887)
T 2uv8_A 1350 SNTLEEFEHGRTPAEMSRPATTTRNGFMEA 1379 (1887)
T ss_dssp CCHHHHHHTTCCGGGSCCTTBTTCCSBCBB
T ss_pred ccchhhhcccCCCccCcCCCcccCCCcccc
Confidence 9 678999999999999875
No 24
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.80 E-value=1.2e-20 Score=150.96 Aligned_cols=97 Identities=18% Similarity=0.262 Sum_probs=87.9
Q ss_pred CcccccCCCcchHHhHHHH-HhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 2 TQFVLVAPSTPRAAKSNSP-IFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 2 ~~~~~~~~~~~~~~~~ia~-~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
+++.+...+.+..++++++ .|+++||+++++++|+|++.||+.|++.|++|++|++||||+|. +++.....|..++.+
T Consensus 1072 ~~~~l~~~~~nt~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~mgaL 1150 (1688)
T 2pff_A 1072 QNDILQESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNMKAT 1150 (1688)
T ss_dssp CSTTHHHHCTHHHHHHHHHSSCCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTTSCS
T ss_pred CcchhccccHHHHHHHHHHHHcCCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhcccc
Confidence 3455566778999999999 89999999999999999999999999999999999999999999 577777789999999
Q ss_pred C-----------CCCCCcccCCCCCceeCC
Q psy11966 81 S-----------PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 81 s-----------~~~~~~pfd~~~~G~v~g 99 (99)
+ |++.|||||++++||++|
T Consensus 1151 S~~~~e~a~G~~Pd~~cRPFd~~rdGfv~G 1180 (1688)
T 2pff_A 1151 SNTLEEFEHGRTPAEMSRPATTTRNGFMEA 1180 (1688)
T ss_dssp CCTTTTTTSSCCSSSSCCSSSSSCCCCCCC
T ss_pred ccChhhhhcCCChhhccCcCccCCCCCccc
Confidence 8 668999999999999975
No 25
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.77 E-value=9.2e-19 Score=146.93 Aligned_cols=93 Identities=16% Similarity=0.145 Sum_probs=85.0
Q ss_pred ccCCCcchHHhHHHHH-hCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC---
Q psy11966 6 LVAPSTPRAAKSNSPI-FALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS--- 81 (99)
Q Consensus 6 ~~~~~~~~~~~~ia~~-~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls--- 81 (99)
+...+.+..++++++. ||++||+++|+++|+|++.||++|+++|++|++|++||||+|. +++..+..|..++.++
T Consensus 2710 ~~~~~~~~~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~~~ 2788 (3089)
T 3zen_D 2710 LQEVLPNVVAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATADTE 2788 (3089)
T ss_dssp HHHTSTTHHHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCCHH
T ss_pred hccccccHHHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhcch
Confidence 4456778899999974 5999999999999999999999999999999999999999999 8999999999998876
Q ss_pred --------CCCCCcccCCCCCceeCC
Q psy11966 82 --------PTGTISPFDASGVGHRQP 99 (99)
Q Consensus 82 --------~~~~~~pfd~~~~G~v~g 99 (99)
+++.|||||++++||++|
T Consensus 2789 ~~~~~~~sp~~~crpFd~~~dG~v~G 2814 (3089)
T 3zen_D 2789 MMRAKGISDSKFSRANDRRRLGFLEA 2814 (3089)
T ss_dssp HHHHTTCCTTTSCCSSBTTCCCBCBB
T ss_pred hhhhccCCcccccCccccCCCCEEEe
Confidence 588999999999999975
No 26
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A
Probab=99.46 E-value=1.1e-14 Score=104.23 Aligned_cols=55 Identities=22% Similarity=0.306 Sum_probs=52.2
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..++.++++.+|+ ++|+++|+++|+|++.||.+|+++|++|++|++|+||+|.+.
T Consensus 67 ~~~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s 123 (397)
T 1wl4_A 67 QNPVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMS 123 (397)
T ss_dssp SCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEST
T ss_pred CHHHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecC
Confidence 4688999999999 899999999999999999999999999999999999999865
No 27
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*
Probab=99.36 E-value=8.1e-13 Score=94.44 Aligned_cols=55 Identities=27% Similarity=0.353 Sum_probs=52.0
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
+.++.+|++.||+ ++|+++|+++|+|++.||.+|+++|++|++|++|++|+|.+.
T Consensus 69 ~~~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s 125 (390)
T 1wdk_C 69 WNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMG 125 (390)
T ss_dssp TTHHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETT
T ss_pred CcHHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccc
Confidence 5688899999999 899999999999999999999999999999999999999753
No 28
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}
Probab=99.25 E-value=1.7e-11 Score=88.40 Aligned_cols=55 Identities=24% Similarity=0.301 Sum_probs=49.7
Q ss_pred hHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 13 RAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 13 ~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
..+..++..+|+ ++|+++|+++|+|++.||.+|+++|++|++|++|++|+|.+..
T Consensus 93 ~~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~ 149 (418)
T 2iik_A 93 IMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSL 149 (418)
T ss_dssp HHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred cHHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCcc
Confidence 345567789999 7899999999999999999999999999999999999998654
No 29
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*
Probab=99.16 E-value=5.8e-11 Score=84.83 Aligned_cols=56 Identities=21% Similarity=0.367 Sum_probs=52.0
Q ss_pred cchHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 11 TPRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 11 ~~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
....+.++++.+|+ ++|+++|+++|+|++.||.+|+++|++|++|++|++|+|.+.
T Consensus 68 ~~~~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s 125 (395)
T 2ib8_A 68 GQAPTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMS 125 (395)
T ss_dssp CSCHHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG
T ss_pred CchHHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeeccc
Confidence 34678899999999 899999999999999999999999999999999999999754
No 30
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...
Probab=99.15 E-value=4.6e-11 Score=85.32 Aligned_cols=56 Identities=16% Similarity=0.287 Sum_probs=52.4
Q ss_pred chHHhHHHHHhCCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 12 PRAAKSNSPIFALA--GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 12 ~~~~~~ia~~~~l~--Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
..++.++++.+|++ +|+++|+++|+|++.||.+|++.|++|++|++|++|+|.+..
T Consensus 64 ~~~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~ 121 (392)
T 2vu1_A 64 QNPARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSM 121 (392)
T ss_dssp SCHHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTT
T ss_pred cHHHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCC
Confidence 46889999999999 999999999999999999999999999999999999997543
No 31
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1
Probab=99.11 E-value=1.3e-10 Score=83.35 Aligned_cols=56 Identities=25% Similarity=0.261 Sum_probs=52.4
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
...+.++++.+|+ ++|+++|+++|+|++.||.+|+++|++|++|++|++|+|.+..
T Consensus 64 ~~~a~~va~~lGl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~ 121 (401)
T 1ulq_A 64 RNVARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSR 121 (401)
T ss_dssp TTHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSS
T ss_pred ChHHHHHHHHhCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCC
Confidence 5688899999999 7899999999999999999999999999999999999997544
No 32
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=99.10 E-value=1.3e-10 Score=80.07 Aligned_cols=52 Identities=21% Similarity=0.328 Sum_probs=50.3
Q ss_pred HHhHHHHHhCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 14 AAKSNSPIFALAG-PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 14 ~~~~ia~~~~l~G-p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
.+.+++..+|+++ |+++++++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 89 ~a~~v~~~lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~ 141 (309)
T 2ebd_A 89 TACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKL 141 (309)
T ss_dssp HHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred HHHHHHHHhCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEeccc
Confidence 7889999999999 999999999999999999999999999999999999984
No 33
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A
Probab=99.10 E-value=2.8e-11 Score=85.10 Aligned_cols=84 Identities=20% Similarity=0.171 Sum_probs=66.0
Q ss_pred hHHhHHHHHhCCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCCCCCCCcccC
Q psy11966 13 RAAKSNSPIFALA--GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLSPTGTISPFD 90 (99)
Q Consensus 13 ~~~~~ia~~~~l~--Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls~~~~~~pfd 90 (99)
..+.+|+..+|++ .|.+.|+.+|+|++.||..|.++|++|++|.+|++|+|.+. ......+ .+..+++..++|||
T Consensus 106 ~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s-~~~~~~~--~~~~~~~~~~~~f~ 182 (345)
T 3s21_A 106 STASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETAN-LVYEKTL--ERMTSPDVTEEEFR 182 (345)
T ss_dssp CHHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCH-HHHHHHH--HHHTCTTCCHHHHH
T ss_pred hHHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-hhhcccc--ccccCCccchhhhh
Confidence 5688999999996 69999999999999999999999999999999999999954 3322222 22344555677887
Q ss_pred CCCCceeCC
Q psy11966 91 ASGVGHRQP 99 (99)
Q Consensus 91 ~~~~G~v~g 99 (99)
.+.++++.|
T Consensus 183 ~~~~~~~~G 191 (345)
T 3s21_A 183 NELAALTLG 191 (345)
T ss_dssp HHHGGGGBC
T ss_pred hhccceeec
Confidence 766665543
No 34
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A
Probab=99.08 E-value=1.9e-10 Score=83.67 Aligned_cols=55 Identities=20% Similarity=0.201 Sum_probs=51.2
Q ss_pred hHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 13 RAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 13 ~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
.++.++++.+|+ ++|+++|+++|+|++.||.+|+++|++|++|++|++|+|.+..
T Consensus 94 ~~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~ 150 (442)
T 2wu9_A 94 SECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTT 150 (442)
T ss_dssp HHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTT
T ss_pred hHHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCC
Confidence 467899999999 8899999999999999999999999999999999999997543
No 35
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A
Probab=99.06 E-value=2.6e-10 Score=81.65 Aligned_cols=55 Identities=18% Similarity=0.278 Sum_probs=51.3
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
...+.+++..+|+ ++|+++|+++|+|++.||.+|++.|++|++|++|++|+|.+.
T Consensus 76 ~~~a~~va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s 132 (393)
T 1afw_A 76 ATEHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMT 132 (393)
T ss_dssp HHHHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHH
T ss_pred ChHHHHHHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecC
Confidence 4578899999999 889999999999999999999999999999999999999743
No 36
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A
Probab=99.05 E-value=9.6e-11 Score=80.88 Aligned_cols=53 Identities=13% Similarity=0.192 Sum_probs=49.9
Q ss_pred hHHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
..+.+++..+|++ +|.++++++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 89 ~~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~ 142 (313)
T 1zow_A 89 TVANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKL 142 (313)
T ss_dssp CHHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEG
T ss_pred cHHHHHHHHhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEccc
Confidence 4688999999998 5999999999999999999999999999999999999974
No 37
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=99.02 E-value=5.9e-10 Score=77.11 Aligned_cols=53 Identities=19% Similarity=0.364 Sum_probs=50.6
Q ss_pred hHHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
..+.++++.+|++ +|+++|+++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 89 ~~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~ 142 (317)
T 1hnj_A 89 SAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVL 142 (317)
T ss_dssp CHHHHHHHHHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECH
T ss_pred cHHHHHHHHhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechh
Confidence 5788999999998 8999999999999999999999999999999999999973
No 38
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=98.99 E-value=7.4e-10 Score=76.76 Aligned_cols=52 Identities=17% Similarity=0.248 Sum_probs=50.2
Q ss_pred HHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 14 AAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 14 ~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
.+.+++..+|+++|.++++++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 89 ~a~~v~~~lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~ 140 (322)
T 1ub7_A 89 TAALVQARFGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEAL 140 (322)
T ss_dssp HHHHHHHHTTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECG
T ss_pred HHHHHHHHhCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechh
Confidence 6889999999999999999999999999999999999999999999999984
No 39
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A
Probab=98.97 E-value=7.3e-10 Score=77.07 Aligned_cols=53 Identities=13% Similarity=0.093 Sum_probs=50.2
Q ss_pred hHHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
..+.+|+..+|++ +|.++++++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 99 ~~a~~v~~~lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~ 152 (335)
T 1u6e_A 99 PAAPMVAASLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKL 152 (335)
T ss_dssp CHHHHHHHHHTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEEC
T ss_pred hHHHHHHHHhCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEccc
Confidence 4788999999998 5999999999999999999999999999999999999985
No 40
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}
Probab=98.93 E-value=2.4e-09 Score=76.50 Aligned_cols=57 Identities=23% Similarity=0.383 Sum_probs=51.9
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCH
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKP 68 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~ 68 (99)
...+.+++..+|+ +.|+++|+++|+|++.||.+|+++|++|++|++|++|+|.+...
T Consensus 66 ~~~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~ 124 (387)
T 3goa_A 66 FNIARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHV 124 (387)
T ss_dssp TTHHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTS
T ss_pred cHHHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCC
Confidence 4577789999999 57999999999999999999999999999999999999986543
No 41
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2
Probab=98.92 E-value=1e-09 Score=78.10 Aligned_cols=53 Identities=9% Similarity=-0.011 Sum_probs=49.9
Q ss_pred hHHhHHHHHhCCCC--Cccee-cccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALAG--PCCTI-DTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~G--p~~tv-~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
..+.+|+..||+++ |.+++ +++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 121 ~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~ 176 (382)
T 1u0m_A 121 SLTAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFC 176 (382)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEG
T ss_pred cHHHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEecc
Confidence 46789999999998 88999 8999999999999999999999999999999974
No 42
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2
Probab=98.91 E-value=1.6e-09 Score=75.72 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=49.9
Q ss_pred HHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 14 AAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 14 ~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
.+.+|++.+|++ +|+++++++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 99 ~a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~ 151 (339)
T 1mzj_A 99 LSVAIAHELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERM 151 (339)
T ss_dssp HHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEG
T ss_pred HHHHHHHHhCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEccc
Confidence 788999999998 7999999999999999999999999999999999999984
No 43
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}
Probab=98.90 E-value=3.5e-09 Score=75.63 Aligned_cols=59 Identities=25% Similarity=0.349 Sum_probs=53.8
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHH
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPAT 70 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~ 70 (99)
...+.+++..+|+ +.|.++|+++|+|++.||..|+++|++|++|.+|++|+|.+.....
T Consensus 66 ~~~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~ 126 (395)
T 4e1l_A 66 QNVARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPY 126 (395)
T ss_dssp CCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHH
T ss_pred chHHHHHHHHcCCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcc
Confidence 4578899999999 6799999999999999999999999999999999999999776543
No 44
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}
Probab=98.87 E-value=2.9e-09 Score=74.19 Aligned_cols=52 Identities=21% Similarity=0.299 Sum_probs=49.8
Q ss_pred HHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 14 AAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 14 ~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
.+.+++..+|++ +|.++++++|+|++.||..|+++|++|++|.+|++|+|.+
T Consensus 90 ~a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~ 142 (331)
T 2x3e_A 90 TAPRVAARLGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTF 142 (331)
T ss_dssp SHHHHHHHTTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECG
T ss_pred HHHHHHHHhCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeecc
Confidence 678999999998 7999999999999999999999999999999999999984
No 45
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}
Probab=98.86 E-value=3.8e-09 Score=75.52 Aligned_cols=56 Identities=21% Similarity=0.278 Sum_probs=51.5
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
...+.+++..+|+ ++|.++|+++|+|++.||..|+++|++|++|.+|++|+|.+..
T Consensus 66 ~~~a~~i~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~ 123 (394)
T 3ss6_A 66 ANTARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSS 123 (394)
T ss_dssp CSHHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTT
T ss_pred chHHHHHHHHcCCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccC
Confidence 3577899999999 5799999999999999999999999999999999999998654
No 46
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}
Probab=98.85 E-value=4.7e-09 Score=75.11 Aligned_cols=56 Identities=23% Similarity=0.332 Sum_probs=52.0
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
...+.+++..+|+ ++|.++|+++|+|++.||..|+++|++|++|.+|++|+|.+..
T Consensus 68 ~~~a~~v~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~ 125 (396)
T 4dd5_A 68 QNIARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSM 125 (396)
T ss_dssp SCHHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTT
T ss_pred chHHHHHHHHcCCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccC
Confidence 4578899999999 5799999999999999999999999999999999999998655
No 47
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}
Probab=98.78 E-value=2.7e-09 Score=76.78 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=47.4
Q ss_pred chHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 12 PRAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 12 ~~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
...+.+++..+|+ +.|.++|+++|+|++.||..|+++|++|++|++|++|+|.+..
T Consensus 71 ~~~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~ 128 (407)
T 3svk_A 71 GDIARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSR 128 (407)
T ss_dssp -CHHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC--
T ss_pred CcHHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEccccc
Confidence 3567899999999 6799999999999999999999999999999999999998765
No 48
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}
Probab=98.77 E-value=1.2e-08 Score=75.49 Aligned_cols=61 Identities=16% Similarity=-0.019 Sum_probs=50.7
Q ss_pred cchHHhHHHHHhCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHH
Q psy11966 11 TPRAAKSNSPIFALAG-PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATS 71 (99)
Q Consensus 11 ~~~~~~~ia~~~~l~G-p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~ 71 (99)
...++..++..+|+.. |..+++.+|+|++.+|.+|++.|++|++|++|+||+|.+.+....
T Consensus 90 ~~~~~~~va~~lGl~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~ 151 (520)
T 4egv_A 90 SSNYPRSVARNIGADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHF 151 (520)
T ss_dssp -CCHHHHHHHHHTCCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC-----
T ss_pred ccCHHHHHHHHcCCCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccc
Confidence 3456778999999988 777889999999999999999999999999999999998765543
No 49
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}
Probab=98.74 E-value=1.8e-08 Score=71.29 Aligned_cols=54 Identities=9% Similarity=0.117 Sum_probs=50.1
Q ss_pred hHHhHHHHHhCCCC--Ccceec-ccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAG--PCCTID-TACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~G--p~~tv~-~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|+++ |.+.|+ ++|+|++.||..|+++|++|++|.+|++|+|.+.
T Consensus 132 ~~a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s 188 (374)
T 2h84_A 132 DVNFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCS 188 (374)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCG
T ss_pred cHHHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc
Confidence 46789999999998 889997 8999999999999999999999999999999853
No 50
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}
Probab=98.65 E-value=3.8e-08 Score=68.77 Aligned_cols=54 Identities=17% Similarity=0.236 Sum_probs=50.3
Q ss_pred hHHhHHHHHhCC--CCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFAL--AGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l--~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|+ +.|.+.++.+|+|++.||..|+++|++|++|.+|++|+|.+.
T Consensus 103 ~~a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s 158 (333)
T 4dfe_A 103 STACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFS 158 (333)
T ss_dssp CHHHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG
T ss_pred cHHHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeeccc
Confidence 468899999999 679999999999999999999999999999999999999853
No 51
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A
Probab=98.55 E-value=1.3e-07 Score=67.37 Aligned_cols=54 Identities=11% Similarity=0.111 Sum_probs=49.1
Q ss_pred hHHhHHHHHhCCCCC--ccee-cccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP--CCTI-DTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp--~~tv-~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|++++ .+.+ +.+|+|++.||..|.++|++|++|.+||+|+|.+.
T Consensus 150 ~~a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s 206 (393)
T 1ted_A 150 GVDVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCS 206 (393)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECG
T ss_pred hHHHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc
Confidence 467899999999985 5777 89999999999999999999999999999999854
No 52
>2d3m_A Pentaketide chromone synthase; chalcone synthase, polyketide synthase, transferase; HET: COA; 1.60A {Aloe arborescens} PDB: 2d51_A 2d52_A*
Probab=98.52 E-value=2.1e-07 Score=66.74 Aligned_cols=54 Identities=13% Similarity=0.111 Sum_probs=49.7
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|++++ .+.++.+|++++.||..|.++|++|++|.+|++|+|.+.
T Consensus 152 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~E~~s 208 (406)
T 2d3m_A 152 SADFQCAKLLGLHANVNKYCIYMQGAYAGGTVMRYAKDLAENNRGARVLVVCAELTI 208 (406)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECGG
T ss_pred CHHHHHHHHcCcCCCcceeeeEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecc
Confidence 467899999999985 688999999999999999999999999999999999843
No 53
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}
Probab=98.49 E-value=1.9e-07 Score=66.89 Aligned_cols=53 Identities=25% Similarity=0.381 Sum_probs=50.1
Q ss_pred hHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
..+.+|+..+|++.|.+.|+.+|++++.||..|.++|++|+.|.+|++|+|.+
T Consensus 155 ~~a~~v~~~LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~ 207 (392)
T 3led_A 155 AMAIEVQNALGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEIC 207 (392)
T ss_dssp CHHHHHHHHTTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred HHHHHHHHHhCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhc
Confidence 46789999999988999999999999999999999999999999999999985
No 54
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A
Probab=98.49 E-value=3e-07 Score=65.47 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=49.7
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|++++ .+.++.+|++++.||..|.++|++|++|.+||+|+|.+.
T Consensus 135 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s 191 (387)
T 3a5r_A 135 GADYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTT 191 (387)
T ss_dssp CHHHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCT
T ss_pred cHHHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccc
Confidence 467899999999985 788999999999999999999999999999999999743
No 55
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}
Probab=98.48 E-value=2.4e-07 Score=64.63 Aligned_cols=54 Identities=20% Similarity=0.342 Sum_probs=49.7
Q ss_pred hHHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+++..+|++ .|.+.++.+|++++.||..|.++|++|+.|.+|++|+|.+.
T Consensus 96 ~~a~~v~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s 150 (323)
T 3il3_A 96 SAACQVQGLLNIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNS 150 (323)
T ss_dssp CHHHHHHHHTTCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGG
T ss_pred cHHHHHHHHhCCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeeccc
Confidence 3688999999996 48999999999999999999999999999999999999854
No 56
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*
Probab=98.47 E-value=1.9e-07 Score=66.78 Aligned_cols=52 Identities=13% Similarity=0.251 Sum_probs=49.1
Q ss_pred hHHhHHHHHhCCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCC
Q psy11966 13 RAAKSNSPIFALAG--PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNL 64 (99)
Q Consensus 13 ~~~~~ia~~~~l~G--p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~ 64 (99)
..+..|+..+|+++ |.+.++++|++++.||..|.++|++|+.|.+||+|+|.
T Consensus 87 ~~a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~ 140 (396)
T 1xpm_A 87 AAAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT 140 (396)
T ss_dssp CHHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE
T ss_pred CHHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh
Confidence 47789999999974 99999999999999999999999999999999999996
No 57
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A
Probab=98.47 E-value=3.3e-07 Score=65.96 Aligned_cols=54 Identities=13% Similarity=0.071 Sum_probs=49.5
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|++++ .+.++.+|++++.||..|.++|++|++|.+|++|+|.+.
T Consensus 162 ~~a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s 218 (413)
T 1xes_A 162 GADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTA 218 (413)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTT
T ss_pred hHHHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhh
Confidence 457899999999985 788999999999999999999999999999999999743
No 58
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*
Probab=98.46 E-value=3.9e-07 Score=63.47 Aligned_cols=54 Identities=17% Similarity=0.199 Sum_probs=50.1
Q ss_pred hHHhHHHHHhCCC-CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALA-GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~-Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+++..+|++ .|.+.++.+|++++.||..|.++|++|+.|.+|++|+|.+.
T Consensus 90 ~~a~~v~~~lGl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s 144 (321)
T 3il6_A 90 SVACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFS 144 (321)
T ss_dssp CHHHHHHHHTTCTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGG
T ss_pred cHHHHHHHHcCCCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEcccc
Confidence 4678999999997 48999999999999999999999999999999999999853
No 59
>1i88_A CHS2, chalcone synthase 2; polyketide synthase, transferase; 1.45A {Medicago sativa} SCOP: c.95.1.2 c.95.1.2 PDB: 1i89_A 1i86_A 1i8b_A 1bi5_A 1cml_A* 1d6f_A* 1chw_A* 1cgz_A* 1cgk_A* 1bq6_A* 1jwx_A 1d6i_A 1d6h_A* 1u0v_A 1u0w_A* 1z1e_A* 1z1f_A*
Probab=98.45 E-value=4e-07 Score=64.89 Aligned_cols=54 Identities=13% Similarity=0.018 Sum_probs=49.6
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+++..+|++++ .+.++.+|++++.||..|.++|++|++|.+|++|+|.+.
T Consensus 139 ~~a~~v~~~lGl~~~~~~~~~v~~aC~~~~~al~~A~~~i~~g~~~~vLvvg~E~~s 195 (389)
T 1i88_A 139 GADYQLTKLLGLRPYVKRYMMYQQGAFAGGTVLRLAKDLAENNKGARVLVVCSEVTA 195 (389)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECGG
T ss_pred hHHHHHHHHcCcCCCchhheeECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc
Confidence 467899999999885 688999999999999999999999999999999999853
No 60
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}
Probab=98.43 E-value=4.3e-07 Score=64.06 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=49.8
Q ss_pred hHHhHHHHHhCCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALA--GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~--Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+++..+|+. .|.+.++.+|++++.||..|.++|++|+.|.+|++|+|.+.
T Consensus 104 ~~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s 159 (354)
T 4efi_A 104 ATAFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTIS 159 (354)
T ss_dssp CHHHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG
T ss_pred cHHHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhc
Confidence 4678999999993 58999999999999999999999999999999999999853
No 61
>3awk_A Chalcone synthase-like polyketide synthase; type III polyketide synthase, transferase; 2.00A {Huperzia serrata} PDB: 3awj_A
Probab=98.42 E-value=6.4e-07 Score=64.16 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=50.0
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
..+.+|+..+|+++. .+.++.+|++++.||..|.++|++|++|.+|++|+|.+..
T Consensus 152 ~~a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~sg~~~~vLvvg~E~~s~ 209 (402)
T 3awk_A 152 GADFQLAKLLGLRPTVKRVMLYQQGAYAGATVLRVAKDLAENNKGARVLVACSEVTAV 209 (402)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHTSTTCEEEEEEEECTTT
T ss_pred hHHHHHHHHcCCCCccceeeEECCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccch
Confidence 467899999999884 7889999999999999999999999999999999998543
No 62
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A
Probab=98.41 E-value=4.7e-07 Score=64.13 Aligned_cols=55 Identities=20% Similarity=0.321 Sum_probs=50.6
Q ss_pred hHHhHHHHHhCCC--CCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 13 RAAKSNSPIFALA--GPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 13 ~~~~~ia~~~~l~--Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
..+.+++..+|+. .|.+.|+.+|++++.||..|.++|++|+.|.+|++|+|.+..
T Consensus 118 ~~a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~ 174 (365)
T 3gwa_A 118 TSACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSK 174 (365)
T ss_dssp CHHHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred cHHHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhc
Confidence 4678999999997 589999999999999999999999999999999999999654
No 63
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*
Probab=98.41 E-value=5.3e-07 Score=63.80 Aligned_cols=54 Identities=26% Similarity=0.367 Sum_probs=50.0
Q ss_pred hHHhHHHHHhCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAG-PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~G-p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+++..+|++. |.+.++.+|++++.||..|.++|++|+.|.+|++|+|.+.
T Consensus 112 ~~a~~v~~~lGl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S 166 (359)
T 3h78_A 112 SQACLIQPLLGLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLS 166 (359)
T ss_dssp CHHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECG
T ss_pred cHHHHHHHHcCCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhc
Confidence 46889999999975 8999999999999999999999999999999999999854
No 64
>2p0u_A Stilbenecarboxylate synthase 2; polyketide synthase, PKS type transferase; 1.90A {Marchantia polymorpha}
Probab=98.40 E-value=6.9e-07 Score=64.25 Aligned_cols=54 Identities=11% Similarity=0.028 Sum_probs=49.6
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|+.++ .+.++.+|++++.||..|.++|++|.+|.+|++|+|.+.
T Consensus 157 ~~a~~v~~~LGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~sg~~~~vLvvg~E~~s 213 (413)
T 2p0u_A 157 GAELATAKLLGLRPNVRRVMMYQQGAFAGATVLRVAKDLAENNAGARVLAICSEVTA 213 (413)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECST
T ss_pred cHHHHHHHHhCCCCCcceEeEECCccHHHHHHHHHHHHHHHhCCCCEEEEEEEhhcc
Confidence 467899999999884 788999999999999999999999999999999999854
No 65
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=98.38 E-value=6.3e-07 Score=69.88 Aligned_cols=54 Identities=15% Similarity=0.127 Sum_probs=49.9
Q ss_pred chHHhHHHHHhCCCCCc---ceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 12 PRAAKSNSPIFALAGPC---CTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 12 ~~~~~~ia~~~~l~Gp~---~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
...+.+|+..||++++. +.++++|++++.||..|.++|++|++|.+||+|+|..
T Consensus 725 p~~a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~ 781 (979)
T 3tsy_A 725 PGADYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEIT 781 (979)
T ss_dssp SCHHHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECT
T ss_pred CcHHHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEec
Confidence 35788999999999855 8999999999999999999999999999999999974
No 66
>1ee0_A 2-pyrone synthase; polyketide synthase, thiolase fold, transferase; HET: CAA; 2.05A {Gerbera hybrid cultivar} SCOP: c.95.1.2 c.95.1.2 PDB: 1qlv_A
Probab=98.36 E-value=6.4e-07 Score=64.15 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=49.0
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
..+.+|+..+|+++. .+.++.+|++++.||..|.++|++|++|.+||+|+|.+
T Consensus 144 ~~a~~v~~~lGl~~~~~~~~~v~~aCss~~~al~~A~~~i~~g~~~~vLvvg~E~~ 199 (402)
T 1ee0_A 144 GADYQLVKLLGLSPSVKRYMLYQQGAAAGGTVLRLAKDLAENNKGSRVLIVCSEIT 199 (402)
T ss_dssp CHHHHHHHHHTCCTTCEEEEECSCCTTHHHHHHHHHHHHHHHSTTCCEEEEEEECG
T ss_pred hHHHHHHHHcCcCCCcceeeEECchhHHHHHHHHHHHHHHHcCCCCEEEEEEEecc
Confidence 367899999999884 78899999999999999999999999999999999974
No 67
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*
Probab=98.31 E-value=1.5e-06 Score=61.34 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=50.0
Q ss_pred hHHhHHHHHhCCCC-CcceecccchHHHHHHHHHHHHHHcCCCC--EEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAG-PCCTIDTACSSTLFGLHLAVGAIERGECD--HAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~G-p~~tv~~acaS~~~Ai~~A~~~i~~G~~d--~~l~gg~~~~~ 66 (99)
..+.+++..+|++. |.+.|+.+|++++.||..|.++|++|..| .+|++|+|.+.
T Consensus 93 ~~a~~v~~~lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s 149 (357)
T 3s3l_A 93 PAASYVAHEAVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFA 149 (357)
T ss_dssp CHHHHHHHHHTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCC
T ss_pred cHHHHHHHHhCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEeccc
Confidence 46789999999976 88999999999999999999999999999 99999999865
No 68
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A
Probab=98.24 E-value=2.6e-06 Score=60.83 Aligned_cols=54 Identities=19% Similarity=0.181 Sum_probs=49.7
Q ss_pred hHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|+++. .+.++.+|++++.||..|.++|++|..+.+|++|+|.+.
T Consensus 133 ~~a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s 189 (387)
T 3oit_A 133 GVDFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTL 189 (387)
T ss_dssp CHHHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGG
T ss_pred cHHHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccc
Confidence 467899999999984 688999999999999999999999999999999999864
No 69
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A
Probab=98.23 E-value=2.3e-06 Score=61.27 Aligned_cols=55 Identities=16% Similarity=0.192 Sum_probs=50.2
Q ss_pred chHHhHHHHHhCCCCC---cceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 12 PRAAKSNSPIFALAGP---CCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 12 ~~~~~~ia~~~~l~Gp---~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
-..+.+|+..+|+.+. .+.++.+|++++.||..|.++|++|..+.+|++|+|.+.
T Consensus 138 p~~a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s 195 (393)
T 3ov2_A 138 PGADYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITV 195 (393)
T ss_dssp SCHHHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGG
T ss_pred CCHHHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc
Confidence 3567899999999984 688999999999999999999999999999999999863
No 70
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*
Probab=98.15 E-value=3.8e-06 Score=60.12 Aligned_cols=54 Identities=15% Similarity=0.147 Sum_probs=50.1
Q ss_pred hHHhHHHHHhCCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAG--PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~G--p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+..|+..+|+++ +.+.+..+|+++..||..|.++|++|..+.+||+|+|.+.
T Consensus 92 s~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s 147 (388)
T 3v4n_A 92 AAAVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAK 147 (388)
T ss_dssp CHHHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEEC
T ss_pred cHHHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhc
Confidence 46789999999986 8888999999999999999999999999999999999864
No 71
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*
Probab=98.15 E-value=3.4e-06 Score=61.32 Aligned_cols=54 Identities=11% Similarity=0.022 Sum_probs=48.7
Q ss_pred chHHhHHHHHhCC----CCCcceecccchHHHHHHHHHHHHHHcCCC--CEEEEEecCCC
Q psy11966 12 PRAAKSNSPIFAL----AGPCCTIDTACSSTLFGLHLAVGAIERGEC--DHAIIGGVNLT 65 (99)
Q Consensus 12 ~~~~~~ia~~~~l----~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~--d~~l~gg~~~~ 65 (99)
...+..|+..+|+ ..+.+.++.+|++++.||..|.++|++|.. |.+||+|+|.+
T Consensus 89 p~~a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~ 148 (450)
T 2f82_A 89 KSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSA 148 (450)
T ss_dssp SCHHHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEE
T ss_pred CcHHHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeec
Confidence 3577899999998 348899999999999999999999999998 99999999974
No 72
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}
Probab=98.10 E-value=6.3e-06 Score=59.48 Aligned_cols=54 Identities=13% Similarity=0.020 Sum_probs=48.5
Q ss_pred hHHhHHHHHhCCCC--Cccee-cccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCC
Q psy11966 13 RAAKSNSPIFALAG--PCCTI-DTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTL 66 (99)
Q Consensus 13 ~~~~~ia~~~~l~G--p~~tv-~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~ 66 (99)
..+.+|+..+|+.. +.+.+ +.+|++++.||..|.+.|++|..+.+|++|+|.+.
T Consensus 174 ~~a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S 230 (413)
T 3v7i_A 174 GLDVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALS 230 (413)
T ss_dssp CHHHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGG
T ss_pred HHHHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEeccc
Confidence 46779999999987 44667 99999999999999999999999999999999853
No 73
>3sqz_A Putative hydroxymethylglutaryl-COA synthase; thiolase fold, HMG_COA synthase, transferase; HET: COA; 1.20A {Streptococcus mutans} PDB: 3leh_A
Probab=98.02 E-value=8.7e-06 Score=58.98 Aligned_cols=55 Identities=11% Similarity=0.081 Sum_probs=49.5
Q ss_pred hHHhHHHHHhCCCC--CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCC
Q psy11966 13 RAAKSNSPIFALAG--PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLK 67 (99)
Q Consensus 13 ~~~~~ia~~~~l~G--p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~ 67 (99)
..+..|...||+++ +.+.+..+|+++..||..|..+|++|..+.+||+|+|....
T Consensus 121 s~a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvgae~~s~ 177 (425)
T 3sqz_A 121 AGAVYVHSLLGIQPFARSFEMKEAAYSATAALNYAKLHVEKHPDTRVLVLASDIAKY 177 (425)
T ss_dssp CHHHHHHHHTTCCSSCEEEEECCC-CHHHHHHHHHHHHHHHSTTCEEEEEEEEEECC
T ss_pred hHHHHHHHHhCCCCCeeEEEEcCHhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhcc
Confidence 46789999999986 88889999999999999999999999999999999998653
No 74
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=97.95 E-value=1.6e-05 Score=56.26 Aligned_cols=53 Identities=15% Similarity=0.242 Sum_probs=46.9
Q ss_pred HHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCH
Q psy11966 14 AAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKP 68 (99)
Q Consensus 14 ~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~ 68 (99)
.+..+...+++ |.+.|+.+|+++..|+..|..+|++|..|.+|++|+|.+.+.
T Consensus 91 ~A~~va~~Lgi--pafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~a 143 (347)
T 3lma_A 91 TANYVARHLKI--PFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNATA 143 (347)
T ss_dssp THHHHHHHHCC--CEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGT
T ss_pred HHHHHHHHhCC--CEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccch
Confidence 56677888743 899999999999999999999999999999999999986543
No 75
>3euo_A Type III pentaketide synthase; alpha helix, acyltransferase, transferase; 1.75A {Neurospora crassa} PDB: 3eut_A* 3euq_A*
Probab=97.93 E-value=2.7e-05 Score=55.44 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=48.8
Q ss_pred chHHhHHHHHhCCCC-C-ccee-cccchHHHHHHHHHHHHHHc----CCCCEEEEEecCCCC
Q psy11966 12 PRAAKSNSPIFALAG-P-CCTI-DTACSSTLFGLHLAVGAIER----GECDHAIIGGVNLTL 66 (99)
Q Consensus 12 ~~~~~~ia~~~~l~G-p-~~tv-~~acaS~~~Ai~~A~~~i~~----G~~d~~l~gg~~~~~ 66 (99)
-..+.+|...+|+++ + .+.| +.+|++++.||..|.++|++ |+.+.+|++|+|.+.
T Consensus 117 p~~a~~v~~~LGl~~~~~~~~v~~~~C~~~~~al~~A~~~i~a~~~~G~~~~vLvv~~E~~s 178 (379)
T 3euo_A 117 PGYDHYVAKELGLSDRLEKVLLHGIGASGGLAALRTAANLCLGHTARGKPARILVLALEVST 178 (379)
T ss_dssp SCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCG
T ss_pred CCHHHHHHHHcCCCCCeeEEEeeCchhhHHHHHHHHHHHHHHhccccCCCCEEEEEEEEeeh
Confidence 346789999999988 4 5778 79999999999999999997 999999999999943
No 76
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}
Probab=97.89 E-value=3.1e-05 Score=54.09 Aligned_cols=54 Identities=22% Similarity=0.396 Sum_probs=49.2
Q ss_pred chHHhHHHHHhCCCC-CcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCC
Q psy11966 12 PRAAKSNSPIFALAG-PCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLT 65 (99)
Q Consensus 12 ~~~~~~ia~~~~l~G-p~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~ 65 (99)
-..+.+|...||++. +++-++.+|++++.||..|..+|++|..+.+|+.++|.+
T Consensus 99 P~~a~~v~~~LGl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~ 153 (350)
T 4ewp_A 99 PSAAALVAHEIGATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERL 153 (350)
T ss_dssp SCHHHHHHHHTTCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEG
T ss_pred CchHHHHHHHhCCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeec
Confidence 346779999999976 778899999999999999999999999999999999974
No 77
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}
Probab=97.73 E-value=8.5e-05 Score=54.38 Aligned_cols=55 Identities=15% Similarity=0.176 Sum_probs=48.8
Q ss_pred chHHhHHHHHhCCCC-C-ccee-cccchHHHHHHHHHHHHHHc----CCCCEEEEEecCCCC
Q psy11966 12 PRAAKSNSPIFALAG-P-CCTI-DTACSSTLFGLHLAVGAIER----GECDHAIIGGVNLTL 66 (99)
Q Consensus 12 ~~~~~~ia~~~~l~G-p-~~tv-~~acaS~~~Ai~~A~~~i~~----G~~d~~l~gg~~~~~ 66 (99)
-..+.+|...+|++. + .+.| ..+|++++.||..|.++|++ |+.+.+||+|+|.+.
T Consensus 146 P~~a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S 207 (465)
T 3e1h_A 146 PGYDHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVST 207 (465)
T ss_dssp SCHHHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCG
T ss_pred CcHHHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecc
Confidence 346789999999987 4 5778 79999999999999999996 999999999999953
No 78
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}
Probab=97.57 E-value=0.00012 Score=53.74 Aligned_cols=52 Identities=15% Similarity=0.131 Sum_probs=44.6
Q ss_pred hHHhHHHHHhCC---CC-CcceecccchHHHHHHHHHHHHHHcCC--CCEEEEEecCC
Q psy11966 13 RAAKSNSPIFAL---AG-PCCTIDTACSSTLFGLHLAVGAIERGE--CDHAIIGGVNL 64 (99)
Q Consensus 13 ~~~~~ia~~~~l---~G-p~~tv~~acaS~~~Ai~~A~~~i~~G~--~d~~l~gg~~~ 64 (99)
..+..|...|+. .. +.+.+..+|++++.||..|.++|++|. .+.+||.|+|.
T Consensus 111 s~a~~v~~~L~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei 168 (478)
T 2p8u_A 111 SVKTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI 168 (478)
T ss_dssp CHHHHHGGGTTTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE
T ss_pred cHHHHHHHHHhhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee
Confidence 356788855555 43 778899999999999999999999999 99999999995
No 79
>2v4w_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.7A {Homo sapiens} PDB: 2wya_A*
Probab=97.45 E-value=0.00019 Score=52.56 Aligned_cols=53 Identities=15% Similarity=0.123 Sum_probs=47.0
Q ss_pred hHHhHHHHHhCCCC----CcceecccchHHHHHHHHHHHHHHcCCC--CEEEEEecCCC
Q psy11966 13 RAAKSNSPIFALAG----PCCTIDTACSSTLFGLHLAVGAIERGEC--DHAIIGGVNLT 65 (99)
Q Consensus 13 ~~~~~ia~~~~l~G----p~~tv~~acaS~~~Ai~~A~~~i~~G~~--d~~l~gg~~~~ 65 (99)
..+..|...||+.| +.+-+..+|+++..||..|.++|++|.. +.+||.|+|..
T Consensus 92 s~A~~v~~~LGl~g~~~~~a~Dv~~ACsGg~~AL~~A~~~I~sg~~~~~~aLVVgaE~~ 150 (460)
T 2v4w_A 92 AVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDIA 150 (460)
T ss_dssp CHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEEE
T ss_pred cHHHHHHHHhCCCCCCCcEEEEecchhHHHHHHHHHHHHHHHhCCccCCEEEEEecccc
Confidence 36778999999832 6788999999999999999999999995 99999999975
No 80
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}
Probab=94.90 E-value=0.023 Score=41.22 Aligned_cols=50 Identities=18% Similarity=0.126 Sum_probs=39.1
Q ss_pred hHHhHHHHHhCCCC----CcceecccchHHHHHHHHHHHHHHcCCCC--EEEEEec
Q psy11966 13 RAAKSNSPIFALAG----PCCTIDTACSSTLFGLHLAVGAIERGECD--HAIIGGV 62 (99)
Q Consensus 13 ~~~~~ia~~~~l~G----p~~tv~~acaS~~~Ai~~A~~~i~~G~~d--~~l~gg~ 62 (99)
..+..|...|++.| +++-+..+|+++..|+..|.++|++|..+ ++|++..
T Consensus 92 s~a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s 147 (460)
T 2wya_A 92 AVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCG 147 (460)
T ss_dssp CHHHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEE
T ss_pred chHHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEec
Confidence 36678888888765 34668899999999999999999999765 4444443
No 81
>2af4_C Phosphate acetyltransferase; PTA dimer with one COA ligand bound PER monomer, acyltransferase; HET: COA; 2.15A {Methanosarcina thermophila} SCOP: c.77.1.5 PDB: 1qzt_A* 2af3_C*
Probab=50.03 E-value=29 Score=23.92 Aligned_cols=39 Identities=15% Similarity=0.070 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 41 GLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 41 Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
.+..|+++++.|++|.++.|+.+. ........+...+.+
T Consensus 104 ~~~~A~~lv~~G~aDa~Vsg~i~~-t~~~l~~a~~~i~~~ 142 (333)
T 2af4_C 104 YVYFAVMMAKLGEVDGVVSGAAHS-SSDTLRPAVQIVKTA 142 (333)
T ss_dssp HHHHHHHHHHTTSCSEEEECTTSC-SHHHHHHHHHHTCBS
T ss_pred hHHHHHHHHHCCCCCEEEECCCCC-HHHHHHHHHHHhccC
Confidence 466699999999999999999875 222333335544443
No 82
>1vmi_A Putative phosphate acetyltransferase; NP_416953.1, structura genomics, JCSG, protein structure initiative, PSI, joint CE structural genomics; 2.32A {Escherichia coli} SCOP: c.77.1.5
Probab=42.01 E-value=36 Score=23.75 Aligned_cols=39 Identities=15% Similarity=0.182 Sum_probs=27.7
Q ss_pred HHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 41 GLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 41 Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
.+..|+++++.|++|.++.|+... ........+...+.+
T Consensus 115 s~~~A~~lv~~G~aDalVsg~i~~-t~~~l~~al~~~g~~ 153 (355)
T 1vmi_A 115 PLMFAAAMVSAGKADVCIAGNLSS-TANVLRAGLRIIGLQ 153 (355)
T ss_dssp HHHHHHHHHHTTSCSEEEECSSSC-HHHHHHHHHHHTCBC
T ss_pred HHHHHHHHHhCCCCCEEEECCCCC-hHHHHHHHHHHhccC
Confidence 455899999999999999998775 333333445555553
No 83
>3uf6_A LMO1369 protein; structural genomics, the center for structural genomics of I diseases, csgid, unknown function, transferase; HET: COD; 1.80A {Listeria monocytogenes} PDB: 3tng_A* 3u9e_A*
Probab=40.73 E-value=26 Score=23.85 Aligned_cols=23 Identities=22% Similarity=0.171 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHcCCCCEEEEEec
Q psy11966 40 FGLHLAVGAIERGECDHAIIGGV 62 (99)
Q Consensus 40 ~Ai~~A~~~i~~G~~d~~l~gg~ 62 (99)
.+...|..+++.|++|.++.|++
T Consensus 73 ~aar~a~~mV~~G~ADa~vsG~~ 95 (291)
T 3uf6_A 73 AAAQGAILAVKNKEADILVKGFI 95 (291)
T ss_dssp HHHHHHHHHHHTTSCSEEEECSS
T ss_pred HHHHHHHHHHHCCCCCEEEECCC
Confidence 45577999999999999999986
No 84
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=39.95 E-value=38 Score=17.75 Aligned_cols=34 Identities=15% Similarity=0.072 Sum_probs=23.6
Q ss_pred ecccchHHHHHHHHHHHHHHcCCCCEEEEEecCC
Q psy11966 31 IDTACSSTLFGLHLAVGAIERGECDHAIIGGVNL 64 (99)
Q Consensus 31 v~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~ 64 (99)
|---|.++..+-..+..+.+.|-.++.+.||.+.
T Consensus 44 ivv~C~~g~rs~~aa~~L~~~G~~~v~~lGG~~~ 77 (85)
T 2jtq_A 44 VKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKD 77 (85)
T ss_dssp EEEEESSSHHHHHHHHHHHHTTCSSEEEEEETTT
T ss_pred EEEEcCCCchHHHHHHHHHHcCCCCEEeccCHHH
Confidence 3344566666666666677788878877788765
No 85
>4e4r_A Phosphate acetyltransferase; structural genomics, EUTD, center for structural genomics of infectious diseases, csgid; HET: TRS; 1.44A {Staphylococcus aureus subsp}
Probab=35.12 E-value=57 Score=22.57 Aligned_cols=36 Identities=8% Similarity=0.062 Sum_probs=24.7
Q ss_pred HHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCC
Q psy11966 44 LAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNML 80 (99)
Q Consensus 44 ~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~l 80 (99)
.|..+++.|++|.++.|.... ........+...+.+
T Consensus 111 ~a~~lV~~G~ADa~vsG~~~~-T~~~l~~al~iig~~ 146 (331)
T 4e4r_A 111 FGTMLVYAGKADGLVSGAAHS-TGDTVRPALQIIKTK 146 (331)
T ss_dssp HHHHHHHTTSCSEEEECSSTT-CCCTHHHHHHHTCBC
T ss_pred HHHHHHHCCCCcEEEeCCCCC-HHHHHHHHHHHhccC
Confidence 499999999999999987653 333344444455543
No 86
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=31.49 E-value=64 Score=21.87 Aligned_cols=40 Identities=18% Similarity=0.045 Sum_probs=31.6
Q ss_pred CCcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHH
Q psy11966 9 PSTPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGA 48 (99)
Q Consensus 9 ~~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~ 48 (99)
.+...++..+....+++.....++-+|.+|..++..|...
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~ 225 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTL 225 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhh
Confidence 3445567777778888888889999999999988877643
No 87
>1r5j_A Putative phosphotransacetylase; lactate dehydrogenase-like nucleotide-binding fold, structural genomics, BSGC structure funded by NIH; 2.70A {Streptococcus pyogenes} SCOP: c.77.1.5
Probab=30.04 E-value=83 Score=21.54 Aligned_cols=41 Identities=10% Similarity=0.004 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 40 FGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 40 ~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
..+..|+++++.|++|.++.|.... ........+...+.+.
T Consensus 112 ~s~~~A~~lv~~G~aDalVtg~i~k-t~al~~a~~~~l~~~~ 152 (337)
T 1r5j_A 112 DVNYFGVMLVKMGLADGMVSGAIHS-TADTVRPALQIIKTKP 152 (337)
T ss_dssp SHHHHHHHHHHTTSCSEEEECSSSC-SHHHHHHHHHSSCBCT
T ss_pred hhHHHHHHHHHCCCCcEEEECCCCC-HHHHHHHHHHHhccCC
Confidence 4566799999999999999986654 2233334444455443
No 88
>2ozz_A Hypothetical protein YHFZ; alpha-beta structure, structural genomics, PSI-2, protein structure initiative; 2.30A {Shigella flexneri 2A} SCOP: c.94.1.1
Probab=29.72 E-value=38 Score=22.29 Aligned_cols=18 Identities=22% Similarity=0.420 Sum_probs=14.8
Q ss_pred HHHHHHHHcCCCCEEEEE
Q psy11966 43 HLAVGAIERGECDHAIIG 60 (99)
Q Consensus 43 ~~A~~~i~~G~~d~~l~g 60 (99)
..-...|++|++|++|++
T Consensus 55 ~~RI~aL~~gk~D~aI~S 72 (231)
T 2ozz_A 55 DIRVECLLNGVYDMAVVS 72 (231)
T ss_dssp HHHHHHHHTTSCSEEEEE
T ss_pred HHHHHHHHcCCCCEEEEe
Confidence 344678999999999987
No 89
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=29.60 E-value=77 Score=22.24 Aligned_cols=39 Identities=13% Similarity=0.016 Sum_probs=30.8
Q ss_pred CcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHH
Q psy11966 10 STPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGA 48 (99)
Q Consensus 10 ~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~ 48 (99)
+.-.++..+-...++++....+|..|.||..+|..|...
T Consensus 185 l~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~ 223 (393)
T 3k0b_A 185 IKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIG 223 (393)
T ss_dssp CCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHh
Confidence 444566777777888888889999999999998877644
No 90
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, unknown function; HET: MSE; 2.95A {Bacillus subtilis} SCOP: c.77.1.4
Probab=28.49 E-value=46 Score=23.11 Aligned_cols=21 Identities=19% Similarity=0.352 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCCCEEEEEe
Q psy11966 41 GLHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 41 Ai~~A~~~i~~G~~d~~l~gg 61 (99)
.+..|+++++.|++|.++.+|
T Consensus 81 s~~~A~~lv~~G~aDa~Vsag 101 (345)
T 1vi1_A 81 SMVLMAQEVAENRADACISAG 101 (345)
T ss_dssp HHHHHHHHHHTTSCSEEEECS
T ss_pred HHHHHHHHHHCCCCcEEEcCC
Confidence 458999999999999999864
No 91
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=27.86 E-value=45 Score=23.17 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCCCCCCCcccCCCCCcee
Q psy11966 42 LHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLSPTGTISPFDASGVGHR 97 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~G~v 97 (99)
...|-+.|++|++|++-.|-.-. .+|....-...-..|.+..+..-|.....||.
T Consensus 297 ~~~ae~~l~~G~aD~V~~gR~~l-adPdlp~k~~~g~pl~~~~~~t~y~~~~~GY~ 351 (358)
T 4a3u_A 297 FETAQAALDSGVADAISFGRPFI-GNPDLPRRFFEKAPLTKDVIETWYTQTPKGYT 351 (358)
T ss_dssp HHHHHHHHHHTSCSEEEESHHHH-HCTTHHHHHHHTCCCCCCCGGGSSCSSSTTTT
T ss_pred HHHHHHHHHcCCceEeHhhHHHH-hChhHHHHHHhCCCCCCCchhcCCCCCCCCcC
Confidence 57788899999999877665544 55554444444444554445555666666663
No 92
>3del_B Arginine binding protein; alpha and beta protein (A/B), periplasmic protein, arginine protein binding, transport protein; 1.92A {Chlamydia trachomatis} SCOP: c.94.1.0
Probab=27.22 E-value=55 Score=20.02 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=15.1
Q ss_pred HHHHHHHHHcCCCCEEEE
Q psy11966 42 LHLAVGAIERGECDHAII 59 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~ 59 (99)
...+.++|..|++|.++.
T Consensus 147 ~~~~~~~L~~g~vDa~~~ 164 (242)
T 3del_B 147 TLEVLMEVMHGKSPVAVL 164 (242)
T ss_dssp HHHHHHHHHTTSSSEEEE
T ss_pred HHHHHHHHHcCCCCEEEe
Confidence 466789999999999874
No 93
>3oiz_A Antisigma-factor antagonist, STAS; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, STAS domain; 1.65A {Rhodobacter sphaeroides} PDB: 3lkl_A
Probab=27.06 E-value=68 Score=17.54 Aligned_cols=28 Identities=25% Similarity=0.220 Sum_probs=24.0
Q ss_pred cchHHHHHHHHHHHHHHcCCCCEEEEEe
Q psy11966 34 ACSSTLFGLHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 34 acaS~~~Ai~~A~~~i~~G~~d~~l~gg 61 (99)
=-+||+.++....+.++....++.|++-
T Consensus 57 iDssgl~~L~~~~~~~~~~g~~l~l~~~ 84 (99)
T 3oiz_A 57 WDISSVQALDMAVLKFRREGAEVRIVGM 84 (99)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCEEEEESH
T ss_pred cCHHHHHHHHHHHHHHHhCCCEEEEEcC
Confidence 4578999999999999998889988763
No 94
>1u7n_A Fatty acid/phospholipid synthesis protein PLSX; structural genomics, enterococcus faecalis V583, PSI, protein structure initiative; HET: MSE; 2.26A {Enterococcus faecalis} SCOP: c.77.1.4
Probab=27.02 E-value=43 Score=23.12 Aligned_cols=21 Identities=33% Similarity=0.537 Sum_probs=18.6
Q ss_pred HHHHHHHHHHcCCCCEEEEEe
Q psy11966 41 GLHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 41 Ai~~A~~~i~~G~~d~~l~gg 61 (99)
.+..|+++++.|++|.++.+|
T Consensus 81 s~~~A~~lv~~G~ada~Vsag 101 (336)
T 1u7n_A 81 SMVLAAQAVKNGEADAIFSAG 101 (336)
T ss_dssp HHHHHHHHHHHTSCSEEEESS
T ss_pred HHHHHHHHHHCCCCcEEEeCC
Confidence 458999999999999999864
No 95
>3h7m_A Sensor protein; histidine kinase sensor domain, kinase, phosphoprotein, transferase; 2.40A {Geobacter sulfurreducens} SCOP: c.94.1.0
Probab=26.10 E-value=60 Score=19.57 Aligned_cols=19 Identities=26% Similarity=0.457 Sum_probs=15.9
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|.+|++|.++.-
T Consensus 147 ~~~~~~~l~~g~vDa~~~~ 165 (234)
T 3h7m_A 147 PADALRLLAAGGCDYAVVA 165 (234)
T ss_dssp HHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHHHHHcCCceEEEec
Confidence 4677889999999998864
No 96
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=26.00 E-value=56 Score=22.87 Aligned_cols=74 Identities=18% Similarity=0.289 Sum_probs=42.3
Q ss_pred HhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCCCCCCCcccCCCCC
Q psy11966 15 AKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLSPTGTISPFDASGV 94 (99)
Q Consensus 15 ~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~ 94 (99)
...|-..++ .|.+.... . ....|.+.|+.|.+|++.+|-.-. .+|....-...-..+.+.....-|..+..
T Consensus 279 ~~~ik~~~~--iPvi~~Gg-----i-t~e~a~~~l~~G~aD~V~iGR~~l-adPdl~~k~~~g~~l~~~~~~~~y~~~~~ 349 (361)
T 3gka_A 279 GQQLKAAFG--GPFIVNEN-----F-TLDSAQAALDAGQADAVAWGKLFI-ANPDLPRRFKLNAPLNEPNAATFYAQGEV 349 (361)
T ss_dssp HHHHHHHHC--SCEEEESS-----C-CHHHHHHHHHTTSCSEEEESHHHH-HCTTHHHHHHHTCCCCCCCGGGSSCSSST
T ss_pred HHHHHHHcC--CCEEEeCC-----C-CHHHHHHHHHcCCccEEEECHHhH-hCcHHHHHHHhCCCCCCCccccccCCCCC
Confidence 344555543 46554433 2 367788899999999988776644 55555444444444444334444454555
Q ss_pred cee
Q psy11966 95 GHR 97 (99)
Q Consensus 95 G~v 97 (99)
||.
T Consensus 350 gy~ 352 (361)
T 3gka_A 350 GYT 352 (361)
T ss_dssp TTT
T ss_pred Ccc
Confidence 653
No 97
>4f3p_A Glutamine-binding periplasmic protein; ssgcid, structural genomics, GLUT seattle structural genomics center for infectious disease; 2.40A {Burkholderia pseudomallei}
Probab=25.57 E-value=61 Score=20.05 Aligned_cols=20 Identities=30% Similarity=0.323 Sum_probs=16.4
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|.+|++|.++.-.
T Consensus 160 ~~~~~~~L~~GrvDa~i~~~ 179 (249)
T 4f3p_A 160 IDQAYLALEAGRVDAAMHDT 179 (249)
T ss_dssp HHHHHHHHHTTSSSEEEEEH
T ss_pred HHHHHHHHHcCCeeEEEeCc
Confidence 45778999999999988644
No 98
>1td9_A Phosphate acetyltransferase; structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.75A {Bacillus subtilis} SCOP: c.77.1.5 PDB: 1xco_A
Probab=25.36 E-value=62 Score=22.17 Aligned_cols=39 Identities=8% Similarity=-0.015 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccC
Q psy11966 40 FGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNM 79 (99)
Q Consensus 40 ~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ 79 (99)
..+..|+++++.|++|.++.|.... ........+...+.
T Consensus 110 ~~~~~A~~lv~~G~aDa~Vsg~i~~-t~~~l~~~l~~~g~ 148 (329)
T 1td9_A 110 DENYFGTMLVYKGLADGLVSGAAHS-TADTVRPALQIIKT 148 (329)
T ss_dssp SHHHHHHHHHHTTSCSEEEECTTSC-HHHHHHHHHHTSCB
T ss_pred hhHHHHHHHHHCCCCCEEEECCCCC-hHHHHHHHHHHhcc
Confidence 5677799999999999999986664 22333333444444
No 99
>3kzg_A Arginine 3RD transport system periplasmic binding protein; arginine transport system, protein structure initiative II(PSI II); 2.06A {Legionella pneumophila subsp} SCOP: c.94.1.0
Probab=24.93 E-value=64 Score=19.71 Aligned_cols=19 Identities=5% Similarity=0.230 Sum_probs=15.8
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|.+|++|.++.-
T Consensus 140 ~~~~~~~l~~G~vDa~~~~ 158 (237)
T 3kzg_A 140 IQDMLLGLSNNQVDASLMD 158 (237)
T ss_dssp HHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHHHHHcCCCCEEEeC
Confidence 5667899999999998754
No 100
>4eq9_A ABC transporter substrate-binding protein-amino A transport; structural genomics, niaid; HET: GSH; 1.40A {Streptococcus pneumoniae}
Probab=24.83 E-value=65 Score=19.64 Aligned_cols=20 Identities=15% Similarity=0.248 Sum_probs=16.3
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|.+|++|.++.-.
T Consensus 151 ~~~~~~~L~~g~vDa~~~~~ 170 (246)
T 4eq9_A 151 FQQIMVRLSDGQFDYKIFDK 170 (246)
T ss_dssp HHHHHHHHHTTSSSEEEEEH
T ss_pred HHHHHHHHHcCCceEEEecH
Confidence 46678899999999988643
No 101
>3i6v_A Periplasmic His/Glu/Gln/Arg/opine family-binding; structural genomics, transporter, PSI-2, protein structure initiative; HET: LYS; 2.00A {Silicibacter pomeroyi} SCOP: c.94.1.0
Probab=24.38 E-value=67 Score=19.74 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=16.2
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|.+|++|.++.--
T Consensus 134 ~~~~~~~L~~GrvDa~i~~~ 153 (232)
T 3i6v_A 134 PEETIAAVRNGEADAVFADR 153 (232)
T ss_dssp HHHHHHHHHTTSSSEEEEEH
T ss_pred HHHHHHHHHcCCcCEEEECh
Confidence 45678999999999988643
No 102
>1ii5_A SLR1257 protein; membrane protein; HET: GLU; 1.60A {Synechocystis SP} SCOP: c.94.1.1 PDB: 1iit_A 1iiw_A
Probab=24.22 E-value=70 Score=19.23 Aligned_cols=19 Identities=11% Similarity=0.337 Sum_probs=15.9
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|..|++|.++.-
T Consensus 144 ~~~~~~~l~~g~vDa~~~~ 162 (233)
T 1ii5_A 144 LTAAITLLQKKQVEAVMFD 162 (233)
T ss_dssp HHHHHHHHHTTSCSEEEEE
T ss_pred HHHHHHHHHcCCccEEEeC
Confidence 4578899999999998864
No 103
>2y7i_A STM4351; arginine-binding protein; HET: ARG; 1.90A {Salmonella enterica subsp}
Probab=24.09 E-value=71 Score=19.20 Aligned_cols=20 Identities=5% Similarity=-0.089 Sum_probs=16.2
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|..|++|.++.--
T Consensus 142 ~~~~~~~l~~grvDa~~~~~ 161 (229)
T 2y7i_A 142 YLNAFTDLKNNRLEGVFGDV 161 (229)
T ss_dssp HHHHHHHHHTTSCSEEEEEH
T ss_pred HHHHHHHHHcCCcCEEEech
Confidence 46778899999999988643
No 104
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=24.04 E-value=1.1e+02 Score=21.45 Aligned_cols=39 Identities=15% Similarity=0.063 Sum_probs=30.4
Q ss_pred CcchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHH
Q psy11966 10 STPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGA 48 (99)
Q Consensus 10 ~~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~ 48 (99)
+.-.++..+-...++++....+|..|.||...|..|...
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a 216 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIG 216 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHh
Confidence 344566666777888888889999999999998887644
No 105
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=24.00 E-value=95 Score=17.63 Aligned_cols=41 Identities=12% Similarity=0.063 Sum_probs=30.5
Q ss_pred cchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccC
Q psy11966 34 ACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNM 79 (99)
Q Consensus 34 acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ 79 (99)
=-+||+.++....+.++....++.+++- ++.....+...|.
T Consensus 62 iDssgl~~L~~~~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl 102 (130)
T 4dgh_A 62 MDITGIQTLEEMIQSFHKRGIKVLISGA-----NSRVSQKLVKAGI 102 (130)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCEEEEECC-----CHHHHHHHHHTTH
T ss_pred ccHHHHHHHHHHHHHHHHCCCEEEEEcC-----CHHHHHHHHHcCC
Confidence 4689999999999999999999998864 3444444444443
No 106
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=23.68 E-value=69 Score=22.37 Aligned_cols=30 Identities=20% Similarity=0.153 Sum_probs=25.7
Q ss_pred cchHHHHHHHHHHHHHHcCCCCEEEEEecC
Q psy11966 34 ACSSTLFGLHLAVGAIERGECDHAIIGGVN 63 (99)
Q Consensus 34 acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~ 63 (99)
+...+...+..|++..++|++|.++.+..+
T Consensus 97 ~g~~a~~~l~~Ai~~~~~G~~dalVT~Pi~ 126 (334)
T 3lxy_A 97 NSHYVVETLAKACDGAISGEFAALVTGPVQ 126 (334)
T ss_dssp GHHHHHHHHHHHHHHHHHTSSSCEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEEEECCcC
Confidence 334566789999999999999999999887
No 107
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=23.22 E-value=62 Score=22.64 Aligned_cols=73 Identities=16% Similarity=0.169 Sum_probs=40.9
Q ss_pred HhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCCCCCCCcccCCCCC
Q psy11966 15 AKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLSPTGTISPFDASGV 94 (99)
Q Consensus 15 ~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~ 94 (99)
...|-..++ .|.+.... . ....|.+.|+.|.+|++.+|-.-. .+|........-..+.+.+...-|..+..
T Consensus 271 ~~~ik~~~~--iPvi~~Gg-----i-t~e~a~~~l~~g~aD~V~iGR~~l-anPdl~~k~~~g~~l~~~d~~~~y~~~~~ 341 (362)
T 4ab4_A 271 GPLIKEAFG--GPYIVNER-----F-DKASANAALASGKADAVAFGVPFI-ANPDLPARLAADAPLNEAHPETFYGKGPV 341 (362)
T ss_dssp HHHHHHHHC--SCEEEESS-----C-CHHHHHHHHHTTSCSEEEESHHHH-HCTTHHHHHHTTCCCCCCCGGGSSSSSST
T ss_pred HHHHHHHCC--CCEEEeCC-----C-CHHHHHHHHHcCCccEEEECHHhH-hCcHHHHHHHcCCCCCCCChhhccCCCCC
Confidence 344545543 46554433 2 357788899999999988776543 55554444444334444333333444455
Q ss_pred ce
Q psy11966 95 GH 96 (99)
Q Consensus 95 G~ 96 (99)
||
T Consensus 342 gy 343 (362)
T 4ab4_A 342 GY 343 (362)
T ss_dssp TT
T ss_pred Cc
Confidence 55
No 108
>4h5g_A Amino acid ABC superfamily ATP binding cassette transporter, binding protein; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: ARG; 1.78A {Streptococcus pneumoniae} PDB: 4h5f_A*
Probab=23.10 E-value=67 Score=20.00 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=14.8
Q ss_pred HHHHHHHHcCCCCEEEEE
Q psy11966 43 HLAVGAIERGECDHAIIG 60 (99)
Q Consensus 43 ~~A~~~i~~G~~d~~l~g 60 (99)
..+.++|.+|++|.++..
T Consensus 154 ~~~~~~l~~GrvD~~~~d 171 (243)
T 4h5g_A 154 GEAVNELQAGKIDAVHMD 171 (243)
T ss_dssp HHHHHHHHHTSCSEEEEE
T ss_pred HHHHHHHHcCCccEEEec
Confidence 457889999999998854
No 109
>1lst_A Lysine, arginine, ornithine-binding protein; amino-acid binding protein; HET: LYS; 1.80A {Salmonella typhimurium} SCOP: c.94.1.1 PDB: 2lao_A 1lag_E* 1lah_E 1laf_E 1hsl_A* 1hpb_P*
Probab=22.54 E-value=79 Score=19.19 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=16.3
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|..|++|.++.-.
T Consensus 143 ~~~~~~~l~~G~vDa~~~~~ 162 (239)
T 1lst_A 143 QDLIYSDLTAGRLDAALQDE 162 (239)
T ss_dssp HHHHHHHHHTTSCSEEEEEH
T ss_pred HHHHHHHHHcCCCCEEEeCc
Confidence 46778899999999988653
No 110
>3k4u_A Binding component of ABC transporter; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; HET: LYS; 2.62A {Wolinella succinogenes} SCOP: c.94.1.0
Probab=22.49 E-value=65 Score=19.81 Aligned_cols=20 Identities=25% Similarity=0.154 Sum_probs=16.0
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|.+|++|.++.-.
T Consensus 145 ~~~~~~~L~~GrvDa~i~~~ 164 (245)
T 3k4u_A 145 EAEAVQEVLNGKADMFIFDL 164 (245)
T ss_dssp HHHHHHHHHSSSSEEEEEEH
T ss_pred HHHHHHHHHcCCCcEEEEcH
Confidence 45678899999999988653
No 111
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=22.30 E-value=73 Score=22.32 Aligned_cols=74 Identities=12% Similarity=0.122 Sum_probs=41.9
Q ss_pred HhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCCCCCCCcccCCCCC
Q psy11966 15 AKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLSPTGTISPFDASGV 94 (99)
Q Consensus 15 ~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls~~~~~~pfd~~~~ 94 (99)
..+|...+ +.|.+.... . ....|.+.|+.|.+|++.+|-.-. .+|........-..+.+.....-|.....
T Consensus 291 ~~~ik~~~--~iPvi~~Gg-----i-~~~~a~~~l~~g~aD~V~igR~~l-~~P~l~~k~~~g~~l~~~~~~t~y~~~~~ 361 (377)
T 2r14_A 291 REQMRQRF--KGGLIYCGN-----Y-DAGRAQARLDDNTADAVAFGRPFI-ANPDLPERFRLGAALNEPDPSTFYGGAEV 361 (377)
T ss_dssp HHHHHHHC--CSEEEEESS-----C-CHHHHHHHHHTTSCSEEEESHHHH-HCTTHHHHHHHTCCCCCCCGGGSSSSSST
T ss_pred HHHHHHHC--CCCEEEECC-----C-CHHHHHHHHHCCCceEEeecHHHH-hCchHHHHHHcCCCCCCCCHHhcCCCCCC
Confidence 44555554 346554433 2 267888999999999988886644 55655544444444443322223333345
Q ss_pred cee
Q psy11966 95 GHR 97 (99)
Q Consensus 95 G~v 97 (99)
||.
T Consensus 362 gy~ 364 (377)
T 2r14_A 362 GYT 364 (377)
T ss_dssp TTT
T ss_pred Ccc
Confidence 653
No 112
>1di0_A Lumazine synthase; transferase; 2.70A {Brucella abortus} SCOP: c.16.1.1 PDB: 1t13_A* 1xn1_A
Probab=22.30 E-value=81 Score=19.53 Aligned_cols=18 Identities=6% Similarity=-0.044 Sum_probs=14.5
Q ss_pred HHHHHcCCCCEEEEEecC
Q psy11966 46 VGAIERGECDHAIIGGVN 63 (99)
Q Consensus 46 ~~~i~~G~~d~~l~gg~~ 63 (99)
..+.+++++|.+|+-|+=
T Consensus 62 ~~la~~~~yDavIaLG~V 79 (158)
T 1di0_A 62 KTLARTGRYAAIVGAAFV 79 (158)
T ss_dssp HHHHHTSCCSEEEEEEEC
T ss_pred HHHHhcCCCCEEEEeecc
Confidence 445578999999998875
No 113
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=22.17 E-value=1.1e+02 Score=19.18 Aligned_cols=39 Identities=18% Similarity=0.073 Sum_probs=31.7
Q ss_pred cchHHhHHHHHhCCCCCcceecccchHHHHHHHHHHHHHHc
Q psy11966 11 TPRAAKSNSPIFALAGPCCTIDTACSSTLFGLHLAVGAIER 51 (99)
Q Consensus 11 ~~~~~~~ia~~~~l~Gp~~tv~~acaS~~~Ai~~A~~~i~~ 51 (99)
......++|..+|+ |+..+.++-.|=..|+..|.+.++.
T Consensus 148 G~~~~~~~A~~~Gl--~~vli~sg~eSI~~Ai~eA~~l~~~ 186 (196)
T 2q5c_A 148 SGKTVTDEAIKQGL--YGETINSGEESLRRAIEEALNLIEV 186 (196)
T ss_dssp ECHHHHHHHHHTTC--EEEECCCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCC--cEEEEecCHHHHHHHHHHHHHHHHH
Confidence 45677889999988 5677888889999999999887754
No 114
>1wdn_A GLNBP, glutamine binding protein; closed form, complex, peptide, complex (binding protein/peptide); 1.94A {Escherichia coli} SCOP: c.94.1.1 PDB: 1ggg_A
Probab=21.98 E-value=83 Score=18.72 Aligned_cols=19 Identities=11% Similarity=0.104 Sum_probs=15.5
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|.+|++|.++.-
T Consensus 139 ~~~~~~~l~~g~vDa~~~~ 157 (226)
T 1wdn_A 139 IDNAYMELGTNRADAVLHD 157 (226)
T ss_dssp HHHHHHHHHTTSCSEEEEE
T ss_pred HHHHHHHHHcCCcCEEEeC
Confidence 4567889999999998854
No 115
>3qax_A Probable ABC transporter arginine-binding protein; periplasmic, transport PR; HET: ARG; 2.00A {Chlamydophila pneumoniae} PDB: 3g41_A* 3n26_A*
Probab=21.83 E-value=79 Score=19.52 Aligned_cols=18 Identities=11% Similarity=0.167 Sum_probs=15.1
Q ss_pred HHHHHHHHHcCCCCEEEE
Q psy11966 42 LHLAVGAIERGECDHAII 59 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~ 59 (99)
...+.++|.+|++|.++.
T Consensus 168 ~~~~~~~l~~G~vDa~~~ 185 (268)
T 3qax_A 168 TLEVIMEVRYGKSPVAVL 185 (268)
T ss_dssp HHHHHHHHHTTSSSEEEE
T ss_pred HHHHHHHHHcCCCCEEEe
Confidence 456789999999999875
No 116
>3hv1_A Polar amino acid ABC uptake transporter substrate binding protein; protein structure initiative II(PSI II), nysgxrc; 1.90A {Streptococcus thermophilus lmg 18311}
Probab=21.81 E-value=73 Score=19.94 Aligned_cols=21 Identities=24% Similarity=0.324 Sum_probs=17.0
Q ss_pred HHHHHHHHHcCCCCEEEEEec
Q psy11966 42 LHLAVGAIERGECDHAIIGGV 62 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg~ 62 (99)
...+.++|.+|++|.++.-..
T Consensus 164 ~~~~~~~L~~GrvDa~i~~~~ 184 (268)
T 3hv1_A 164 FTQALIDLNSGRIDGLLIDRV 184 (268)
T ss_dssp HHHHHHHHHHTSCSEEEEEHH
T ss_pred HHHHHHHHHcCCCCEEEeCHH
Confidence 567788999999999886544
No 117
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=21.79 E-value=1e+02 Score=17.76 Aligned_cols=43 Identities=9% Similarity=-0.131 Sum_probs=33.3
Q ss_pred cchHHHHHHHHHHHHHHcCCCCEEEEEecCCCCCHHHHHHHHHccCCC
Q psy11966 34 ACSSTLFGLHLAVGAIERGECDHAIIGGVNLTLKPATSLMYHKYNMLS 81 (99)
Q Consensus 34 acaS~~~Ai~~A~~~i~~G~~d~~l~gg~~~~~~~~~~~~~~~~~~ls 81 (99)
=-+||+.++....+.++....++.|++ .++.....+...|...
T Consensus 77 iDssgl~~L~~~~~~~~~~g~~l~l~~-----~~~~v~~~l~~~gl~~ 119 (143)
T 3llo_A 77 MDSVGVKTLAGIVKEYGDVGIYVYLAG-----CSAQVVNDLTSNRFFE 119 (143)
T ss_dssp CCHHHHHHHHHHHHHHHTTTCEEEEES-----CCHHHHHHHHHTTTTS
T ss_pred ccHHHHHHHHHHHHHHHHCCCEEEEEe-----CCHHHHHHHHhCCCee
Confidence 458999999999999999999999875 3455566666666643
No 118
>3mpk_A Virulence sensor protein BVGS; venus flytrap, sensor domain, signaling protein; 2.04A {Bordetella pertussis} PDB: 3mpl_A
Probab=21.45 E-value=74 Score=20.06 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=16.0
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|.+|++|.++.-
T Consensus 169 ~~~~l~~L~~GrvDa~i~~ 187 (267)
T 3mpk_A 169 PSEAMLMVANGQADAVVQT 187 (267)
T ss_dssp HHHHHHHHHHTSCSEEEEE
T ss_pred HHHHHHHHHcCCCCEEEec
Confidence 4677899999999998865
No 119
>2b99_A Riboflavin synthase; lumazine riboflavin, transferase; HET: RDL; 2.22A {Methanocaldococcus jannaschii} PDB: 2b98_A*
Probab=21.41 E-value=79 Score=19.61 Aligned_cols=20 Identities=20% Similarity=0.321 Sum_probs=15.6
Q ss_pred HHHHHHHcCCCCEEEEEecC
Q psy11966 44 LAVGAIERGECDHAIIGGVN 63 (99)
Q Consensus 44 ~A~~~i~~G~~d~~l~gg~~ 63 (99)
.+..+.+++++|.+|+-|+=
T Consensus 48 aak~la~~~~yDavIaLG~V 67 (156)
T 2b99_A 48 ACKKLLEEEGCDIVMALGMP 67 (156)
T ss_dssp HHHHHHHHSCCSEEEEEECC
T ss_pred HHHHHHhcCCCCEEEEeccc
Confidence 33445678999999999986
No 120
>1rvv_A Riboflavin synthase; transferase, flavoprotein; HET: INI; 2.40A {Bacillus subtilis} SCOP: c.16.1.1 PDB: 1zis_A* 1vsw_A 1vsx_A 3jv8_A
Probab=21.18 E-value=89 Score=19.28 Aligned_cols=18 Identities=22% Similarity=0.099 Sum_probs=14.3
Q ss_pred HHHHHcCCCCEEEEEecC
Q psy11966 46 VGAIERGECDHAIIGGVN 63 (99)
Q Consensus 46 ~~~i~~G~~d~~l~gg~~ 63 (99)
..+.+++++|.+|+-|+=
T Consensus 64 ~~la~~~~yDavIaLG~V 81 (154)
T 1rvv_A 64 KKMAETKKYDAIITLGTV 81 (154)
T ss_dssp HHHHHTSCCSEEEEEEEE
T ss_pred HHHHhcCCCCEEEEeeee
Confidence 444578999999998875
No 121
>4dz1_A DALS D-alanine transporter; D-alanine binding, periplasmic, transport protein; 1.90A {Salmonella enterica} PDB: 3r39_A 4f3s_A
Probab=21.04 E-value=77 Score=19.83 Aligned_cols=20 Identities=20% Similarity=0.330 Sum_probs=16.2
Q ss_pred HHHHHHHHHcCCCCEEEEEe
Q psy11966 42 LHLAVGAIERGECDHAIIGG 61 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~gg 61 (99)
...+.++|.+|++|.++.-.
T Consensus 173 ~~~~~~~l~~G~vDa~~~~~ 192 (259)
T 4dz1_A 173 YNETMADLKNGNLDLAFIEE 192 (259)
T ss_dssp HHHHHHHHHHTSCSEEEEEH
T ss_pred HHHHHHHHHcCCCCEEEecH
Confidence 35678899999999988653
No 122
>2obx_A DMRL synthase 1, 6,7-dimethyl-8-ribityllumazine synthase 1, riboflavin S; alpha-beta, transferase; HET: INI; 2.53A {Mesorhizobium loti}
Probab=21.01 E-value=81 Score=19.51 Aligned_cols=18 Identities=11% Similarity=-0.001 Sum_probs=14.4
Q ss_pred HHHHHcCCCCEEEEEecC
Q psy11966 46 VGAIERGECDHAIIGGVN 63 (99)
Q Consensus 46 ~~~i~~G~~d~~l~gg~~ 63 (99)
..+.+++++|.+|+-|+=
T Consensus 63 ~~la~~~~yDavIaLG~V 80 (157)
T 2obx_A 63 RTLAETGRYGAVLGTAFV 80 (157)
T ss_dssp HHHHHHTCCSEEEEEEEC
T ss_pred HHHHhcCCCCEEEEeecc
Confidence 444578999999998875
No 123
>4i62_A Amino acid ABC transporter, periplasmic amino ACI protein, putative; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases (NIAI niaid; HET: ARG; 1.05A {Streptococcus pneumoniae}
Probab=21.00 E-value=84 Score=19.41 Aligned_cols=19 Identities=16% Similarity=0.237 Sum_probs=15.8
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|.+|++|.++.-
T Consensus 180 ~~~~~~~l~~g~vDa~~~~ 198 (269)
T 4i62_A 180 NGNLITDLKSGQVDAVIFE 198 (269)
T ss_dssp HHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHHHHHcCCCCEEEeC
Confidence 4577899999999998854
No 124
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=20.96 E-value=1.2e+02 Score=21.17 Aligned_cols=30 Identities=20% Similarity=0.038 Sum_probs=25.0
Q ss_pred chHHHHHHHHHHHHHHcCCCCEEEEEecCC
Q psy11966 35 CSSTLFGLHLAVGAIERGECDHAIIGGVNL 64 (99)
Q Consensus 35 caS~~~Ai~~A~~~i~~G~~d~~l~gg~~~ 64 (99)
-..+..+|..|++..++|++|.++.+..++
T Consensus 93 g~~a~~~l~~A~~~~~~G~~dalVTaPi~K 122 (328)
T 1yxo_A 93 AAYVLETLTRAGQGCLDGHFAGMITAPVHK 122 (328)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSEEEECCCCH
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEECCCCH
Confidence 345677799999999999999999887663
No 125
>2pyy_A Ionotropic glutamate receptor bacterial homologue; GLUR0 ligand binding domain, transport protein; HET: GLU; 2.10A {Nostoc punctiforme}
Probab=20.69 E-value=89 Score=18.60 Aligned_cols=19 Identities=16% Similarity=0.284 Sum_probs=15.8
Q ss_pred HHHHHHHHHcCCCCEEEEE
Q psy11966 42 LHLAVGAIERGECDHAIIG 60 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~g 60 (99)
...+.++|..|++|.++.-
T Consensus 140 ~~~~~~~l~~g~~D~~~~~ 158 (228)
T 2pyy_A 140 IEEAYKALQTKKADAVVFD 158 (228)
T ss_dssp HHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHHHHHcCCCCEEEec
Confidence 4577889999999998864
No 126
>3tql_A Arginine-binding protein; transport and binding proteins, transport protein; HET: MSE ARG; 1.59A {Coxiella burnetii} SCOP: c.94.1.0
Probab=20.62 E-value=69 Score=19.14 Aligned_cols=18 Identities=17% Similarity=0.115 Sum_probs=14.7
Q ss_pred HHHHHHHHHcCCCCEEEE
Q psy11966 42 LHLAVGAIERGECDHAII 59 (99)
Q Consensus 42 i~~A~~~i~~G~~d~~l~ 59 (99)
...+.++|.+|++|.++.
T Consensus 140 ~~~~~~~l~~grvDa~~~ 157 (227)
T 3tql_A 140 EEDALMDLTSGRVDAVVG 157 (227)
T ss_dssp HHHHHHHHTTTSSSEEES
T ss_pred HHHHHHHHHcCCcCEEEe
Confidence 356788999999999773
No 127
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=20.25 E-value=1.2e+02 Score=21.07 Aligned_cols=29 Identities=14% Similarity=0.061 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCEEEEEecCC
Q psy11966 36 SSTLFGLHLAVGAIERGECDHAIIGGVNL 64 (99)
Q Consensus 36 aS~~~Ai~~A~~~i~~G~~d~~l~gg~~~ 64 (99)
..+..+|..|++..+.|++|.++.+..++
T Consensus 101 ~~a~~~l~~A~~~~~~G~~dalVTaPi~K 129 (330)
T 2hi1_A 101 DLAYRCVKRATELALRGDVQAIATAPLNK 129 (330)
T ss_dssp HHHHHHHHHHHHHHHTTSCSEEEECCCCH
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEECCCCH
Confidence 44667799999999999999999887663
No 128
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=20.01 E-value=1.5e+02 Score=20.84 Aligned_cols=34 Identities=18% Similarity=0.084 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHH--------cCCCCEEEEEecCCCCCHHHHH
Q psy11966 39 LFGLHLAVGAIE--------RGECDHAIIGGVNLTLKPATSL 72 (99)
Q Consensus 39 ~~Ai~~A~~~i~--------~G~~d~~l~gg~~~~~~~~~~~ 72 (99)
......|+++|+ ..++|++|+.|+.....|...+
T Consensus 197 ~~~~~~a~~~l~~~i~~~~~~~~aDllLviGTSl~V~Paa~l 238 (361)
T 1q14_A 197 SETWLNDSEWLREKITTSGKHPQQPLVIVVGTSLAVYPFASL 238 (361)
T ss_dssp HHHHHHHHHHHHHC--------CCCEEEEESCCCCSTTGGGH
T ss_pred HHHHHHHHHhhhhcchhhhhhccCCEEEEECCCCCchhHHHH
Confidence 334455555553 6789999999999877765543
Done!