BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11967
(539 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I8T|A Chain A, N-Terminal Crd1 Domain Of Mouse Galectin-4 In Complex With
Lactose
Length = 164
Score = 73.6 bits (179), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFD-VNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 188
RF VN + D D+A HFNPRFD + V N+ ++ WG+EEK S PF+ G++F
Sbjct: 57 RFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFNTMQSGQWGKEEKKK--SMPFQKGKHFE 114
Query: 189 LEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
L P + VNG F + +R P+ +T LQ+
Sbjct: 115 LVFMVMPEHYKVVVNGNSFYEYGHRLPVQMVTHLQV 150
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFD-VNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 523
RF VN + D D+A HFNPRFD + V N+ ++ WG+EEK S PF+ G++F
Sbjct: 57 RFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFNTMQSGQWGKEEKKK--SMPFQKGKHFE 114
Query: 524 LEIFCAPSEFMPV 536
L P + V
Sbjct: 115 LVFMVMPEHYKVV 127
>pdb|2DYC|A Chain A, Crystal Structure Of The N-Terminal Domain Of Mouse
Galectin-4
Length = 158
Score = 72.8 bits (177), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFD-VNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 188
RF VN + D D+A HFNPRFD + V N+ ++ WG+EEK S PF+ G++F
Sbjct: 44 RFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFNTXQSGQWGKEEKKK--SXPFQKGKHFE 101
Query: 189 LEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
L P + VNG F + +R P+ +T LQ+
Sbjct: 102 LVFXVXPEHYKVVVNGNSFYEYGHRLPVQXVTHLQV 137
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFD-VNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 523
RF VN + D D+A HFNPRFD + V N+ ++ WG+EEK S PF+ G++F
Sbjct: 44 RFHVNFAVGQDDGADVAFHFNPRFDGWDKVVFNTXQSGQWGKEEKKK--SXPFQKGKHFE 101
Query: 524 LEIFCAPSEFMPV 536
L P + V
Sbjct: 102 LVFXVXPEHYKVV 114
>pdb|2YY1|A Chain A, Crystal Sturcture Of N-Terminal Domain Of Human Galectin-9
Containing L-Acetyllactosamine
Length = 160
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 119 INTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF-DVNYCVRNSCRNKVWGEEEKAAYV 177
+N LS+ RFAVN +G +DIA HFNPRF D Y V N+ +N WG EE+ ++
Sbjct: 40 VNGTVLSSSGTRFAVNFQ-TGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHM 98
Query: 178 SNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
PF+ G F L S+F VNG F + +R P + + + +
Sbjct: 99 --PFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISV 143
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 452 VSINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF-DVNYCVRNSCRNKVWGEEEKAA 510
+++N LS+ RFAVN +G +DIA HFNPRF D Y V N+ +N WG EE+
Sbjct: 38 ITVNGTVLSSSGTRFAVNFQ-TGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKT 96
Query: 511 YVSNPFKLGENFVLEIFCAPSEF 533
++ PF+ G F L S+F
Sbjct: 97 HM--PFQKGMPFDLCFLVQSSDF 117
>pdb|2EAK|A Chain A, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With Lactose
pdb|2EAK|B Chain B, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With Lactose
pdb|2EAK|C Chain C, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With Lactose
pdb|2EAL|A Chain A, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With Forssman Pentasaccharide
pdb|2EAL|B Chain B, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With Forssman Pentasaccharide
pdb|2ZHK|A Chain A, Crystal Structure Of Human Galectin-9 N-terminal Crd In
Complex With N-acetyllactosamine Dimer (crystal 1)
pdb|2ZHK|B Chain B, Crystal Structure Of Human Galectin-9 N-terminal Crd In
Complex With N-acetyllactosamine Dimer (crystal 1)
pdb|2ZHL|A Chain A, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Dimer (Crystal 2)
pdb|2ZHL|B Chain B, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Dimer (Crystal 2)
pdb|2ZHL|C Chain C, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Dimer (Crystal 2)
pdb|2ZHL|D Chain D, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Dimer (Crystal 2)
pdb|2ZHM|A Chain A, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Trimer (Crystal 1)
pdb|2ZHM|B Chain B, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Trimer (Crystal 1)
pdb|2ZHM|C Chain C, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Trimer (Crystal 1)
pdb|2ZHM|D Chain D, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Trimer (Crystal 1)
pdb|2ZHN|A Chain A, Crystal Structure Of Human Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Trimer (Crystal 2)
Length = 148
Score = 68.6 bits (166), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 119 INTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF-DVNYCVRNSCRNKVWGEEEKAAYV 177
+N LS+ RFAVN +G +DIA HFNPRF D Y V N+ +N WG EE+ ++
Sbjct: 33 VNGTVLSSSGTRFAVNFQ-TGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHM 91
Query: 178 SNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
PF+ G F L S+F VNG F + +R P + + + +
Sbjct: 92 --PFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISV 136
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 452 VSINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF-DVNYCVRNSCRNKVWGEEEKAA 510
+++N LS+ RFAVN +G +DIA HFNPRF D Y V N+ +N WG EE+
Sbjct: 31 ITVNGTVLSSSGTRFAVNFQ-TGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKT 89
Query: 511 YVSNPFKLGENFVLEIFCAPSEF 533
++ PF+ G F L S+F
Sbjct: 90 HM--PFQKGMPFDLCFLVQSSDF 110
>pdb|1X50|A Chain A, Solution Structure Of The C-Terminal Gal-Bind Lectin
Domain From Human Galectin-4
Length = 164
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/111 (38%), Positives = 49/111 (44%), Gaps = 11/111 (9%)
Query: 131 FAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLE 190
FA+N + DIALH NPR VRNS N WG EEK NPF G+ F L
Sbjct: 56 FAINFKVG--SSGDIALHINPRMGNGTVVRNSLLNGSWGSEEK-KITHNPFGPGQFFDLS 112
Query: 191 IFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTKLLHSY 241
I C F NG H F + RL RVD +IQ + SY
Sbjct: 113 IRCGLDRFKVYANGQHLFDFAH--------RLSAFQRVDTLEIQGDVTLSY 155
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 466 FAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLE 525
FA+N + DIALH NPR VRNS N WG EEK NPF G+ F L
Sbjct: 56 FAINFKVG--SSGDIALHINPRMGNGTVVRNSLLNGSWGSEEK-KITHNPFGPGQFFDLS 112
Query: 526 IFCAPSEF 533
I C F
Sbjct: 113 IRCGLDRF 120
>pdb|3LSD|A Chain A, N-Domain Of Human AdhesionGROWTH-Regulatory Galectin-9
pdb|3LSE|A Chain A, N-Domain Of Human AdhesionGROWTH-Regulatory Galectin-9 In
C With Lactose
Length = 143
Score = 68.2 bits (165), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 119 INTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF-DVNYCVRNSCRNKVWGEEEKAAYV 177
+N LS+ RFAVN +G +DIA HFNPRF D Y V N+ +N WG EE+ ++
Sbjct: 28 VNGTVLSSSGTRFAVNFQ-TGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKTHM 86
Query: 178 SNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
PF+ G F L S+F VNG F + +R P + + + +
Sbjct: 87 --PFQKGMPFDLCFLVQSSDFKVMVNGILFVQYFHRVPFHRVDTISV 131
Score = 56.6 bits (135), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 452 VSINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF-DVNYCVRNSCRNKVWGEEEKAA 510
+++N LS+ RFAVN +G +DIA HFNPRF D Y V N+ +N WG EE+
Sbjct: 26 ITVNGTVLSSSGTRFAVNFQ-TGFSGNDIAFHFNPRFEDGGYVVCNTRQNGSWGPEERKT 84
Query: 511 YVSNPFKLGENFVLEIFCAPSEF 533
++ PF+ G F L S+F
Sbjct: 85 HM--PFQKGMPFDLCFLVQSSDF 105
>pdb|2YRO|A Chain A, Solution Structure Of The C-Terminal Gal-Bind Lectin
Protein From Human Galectin-8
Length = 155
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 118 VINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYV 177
V+ +++A F V+L+ DIALH NPR ++ VRNS + WGEEE+
Sbjct: 33 VVVKGEVNANAKSFNVDLLAG--KSKDIALHLNPRLNIKAFVRNSFLQESWGEEER-NIT 89
Query: 178 SNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYP-LYTITRLQILPRVDIFKIQT 235
S PF G F + I+C EF AVNG H + +R+ L +I L+I + + ++++
Sbjct: 90 SFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRS 148
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 479 DIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
DIALH NPR ++ VRNS + WGEEE+ S PF G F + I+C EF
Sbjct: 57 DIALHLNPRLNIKAFVRNSFLQESWGEEER-NITSFPFSPGMYFEMIIYCDVREF 110
>pdb|3NV1|A Chain A, Crystal Structure Of Human Galectin-9 C-Terminal Crd
pdb|3NV2|A Chain A, Crystal Structure Of Human Galectin-9 C-Terminal Crd In
Complex With N-Acetyllactosamine
pdb|3NV3|A Chain A, Crystal Structure Of Human Galectin-9 C-Terminal Crd In
Complex With Biantennary Oligosaccharide
pdb|3NV4|A Chain A, Crystal Structure Of Human Galectin-9 C-Terminal Crd In
Complex With Sialyllactose
Length = 138
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 55/107 (51%), Gaps = 5/107 (4%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
RF +NL H IA H NPRFD N VRN+ + WG EE++ PF G++F +
Sbjct: 36 RFHINLCSGNH----IAFHLNPRFDENAVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSV 91
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYP-LYTITRLQILPRVDIFKIQT 235
I C AV+G H + +R L TI RL++ + + +QT
Sbjct: 92 WILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQLTHVQT 138
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
RF +NL H IA H NPRFD N VRN+ + WG EE++ PF G++F +
Sbjct: 36 RFHINLCSGNH----IAFHLNPRFDENAVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSV 91
Query: 525 EIFC 528
I C
Sbjct: 92 WILC 95
>pdb|4HL0|A Chain A, Crystal Structure Of Full-length Toxascaris Leonina
Galectin
pdb|4HL0|B Chain B, Crystal Structure Of Full-length Toxascaris Leonina
Galectin
Length = 278
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 53/105 (50%), Gaps = 5/105 (4%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
RF +NL+ + DIALHFNPRFD VRNS + WG EE+ NP + G L
Sbjct: 177 RFHINLL---KKNGDIALHFNPRFDEKAIVRNSLISGEWGNEEREG--KNPLEKGIGCDL 231
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQ 234
E F V+G F ++ +R + I LQI V++ IQ
Sbjct: 232 EFRNEEYAFQIYVDGERFATYAHRLDPHDINGLQIGGDVEVTGIQ 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 73/167 (43%), Gaps = 46/167 (27%)
Query: 394 SKFNISLTNEQIKELKFNAVESLLKVPKSFVMRILLKEDHFSVSID--------DEKFIN 445
SKF+IS+ +++KE + +VP S V HFSV D K+
Sbjct: 102 SKFSISVDQKEVKEYEH-------RVPLSSVT-------HFSVDGDILITYIHWGGKYYP 147
Query: 446 YKYDRGVSIN--TNDLSALVF--------RFAVNLVISGHDDDDIALHFNPRFDVNYCVR 495
Y+ G++ + S L+F RF +NL+ + DIALHFNPRFD VR
Sbjct: 148 VPYESGLAGDGLAPGKSLLIFATPEKKGKRFHINLL---KKNGDIALHFNPRFDEKAIVR 204
Query: 496 NSCRNKVWGEEEKAAYVSNPFKLG---------ENFVLEIFCAPSEF 533
NS + WG EE+ NP + G E + +I+ F
Sbjct: 205 NSLISGEWGNEEREG--KNPLEKGIGCDLEFRNEEYAFQIYVDGERF 249
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 18/193 (9%)
Query: 130 RFAVNLVISGHD--DDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENF 187
RF +NL + D +D+ LH + RFD V N+ WG+EE+ SNP+K G++
Sbjct: 37 RFTINLHNTSADFSGNDVPLHISVRFDEGKIVFNTFSKGEWGKEERK---SNPYKKGDDI 93
Query: 188 VLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTKLLHSYPATTQD 247
+ I S+F +V+ + +R PL ++T + + I I + YP +
Sbjct: 94 DIRIRAHDSKFSISVDQKEVKEYEHRVPLSSVTHFSVDGDILITYIHWGGKY-YPVPYES 152
Query: 248 DLVAQLKDQPLYHHHVLGYEKVDVSGKVPKFFINLQHGKLLWPHPNISFHTSVRFKYKA- 306
L D +L + + GK +F IN LL + +I+ H + RF KA
Sbjct: 153 GLAG---DGLAPGKSLLIFATPEKKGK--RFHIN-----LLKKNGDIALHFNPRFDEKAI 202
Query: 307 -ESNVTSGDVKQE 318
+++ SG+ E
Sbjct: 203 VRNSLISGEWGNE 215
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 465 RFAVNLVISGHD--DDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENF 522
RF +NL + D +D+ LH + RFD V N+ WG+EE+ SNP+K G++
Sbjct: 37 RFTINLHNTSADFSGNDVPLHISVRFDEGKIVFNTFSKGEWGKEERK---SNPYKKGDDI 93
Query: 523 VLEIFCAPSEF 533
+ I S+F
Sbjct: 94 DIRIRAHDSKF 104
>pdb|4FQZ|A Chain A, Crystal Structure Of A Protease-Resistant Mutant Form Of
Human Galectin-8
pdb|3VKL|A Chain A, Protease-Resistant Mutant Form Of Human Galectin-8 In
Complex With Two Lactose Molecules
pdb|3VKL|B Chain B, Protease-Resistant Mutant Form Of Human Galectin-8 In
Complex With Two Lactose Molecules
pdb|3VKM|A Chain A, Protease-Resistant Mutant Form Of Human Galectin-8 In
Complex With Sialyllactose And Lactose
pdb|3VKM|B Chain B, Protease-Resistant Mutant Form Of Human Galectin-8 In
Complex With Sialyllactose And Lactose
Length = 291
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 4/119 (3%)
Query: 118 VINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYV 177
V+ +++A F V+L+ DIALH NPR ++ VRNS + WGEEE+
Sbjct: 175 VVVKGEVNANAKSFNVDLLAG--KSKDIALHLNPRLNIKAFVRNSFLQESWGEEERNI-T 231
Query: 178 SNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYP-LYTITRLQILPRVDIFKIQT 235
S PF G F + I+C EF AVNG H + +R+ L +I L+I + + ++++
Sbjct: 232 SFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVRS 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 144 DIALHFNPRFDVNYCVR-NSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAV 202
D+A HFNPRF C+ N+ N+ WG EE PFK ++F + I +F AV
Sbjct: 61 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIMVLKDKFQVAV 118
Query: 203 NGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTKLLHSYPATTQDDLVAQLKDQPLYHHH 262
NG H + +R I L I +V+I I S+ + + A+L + P+
Sbjct: 119 NGKHTLLYGHRIGPEKIDTLGIYGKVNIHSIG----FSFSSHMRLPFAARL-NTPMGPGR 173
Query: 263 VLGYEKVDVSGKVPKFFINLQHGKLLWPHPNISFHTSVRFKYKA 306
+ K +V+ F ++L GK +I+ H + R KA
Sbjct: 174 TV-VVKGEVNANAKSFNVDLLAGK----SKDIALHLNPRLNIKA 212
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 479 DIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
DIALH NPR ++ VRNS + WGEEE+ S PF G F + I+C EF
Sbjct: 199 DIALHLNPRLNIKAFVRNSFLQESWGEEERNI-TSFPFSPGMYFEMIIYCDVREF 252
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 479 DIALHFNPRFDVNYCVR-NSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
D+A HFNPRF C+ N+ N+ WG EE PFK ++F + I +F
Sbjct: 61 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIMVLKDKF 114
>pdb|3OJB|A Chain A, Crystal Structure Of C-Terminal Domain Of Human Galectin-8
pdb|3OJB|B Chain B, Crystal Structure Of C-Terminal Domain Of Human Galectin-8
pdb|3OJB|C Chain C, Crystal Structure Of C-Terminal Domain Of Human Galectin-8
pdb|3OJB|D Chain D, Crystal Structure Of C-Terminal Domain Of Human Galectin-8
Length = 139
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 118 VINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYV 177
V+ +++A F V+L+ DIALH NPR ++ VRNS + WGEEE+
Sbjct: 25 VVVKGEVNANAKSFNVDLLAG--KSKDIALHLNPRLNIKAFVRNSFLQESWGEEER-NIT 81
Query: 178 SNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYP-LYTITRLQILPRVDIFKIQ 234
S PF G F + I+C EF AVNG H + +R+ L +I L+I + + +++
Sbjct: 82 SFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSIDTLEINGDIHLLEVR 139
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 479 DIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
DIALH NPR ++ VRNS + WGEEE+ S PF G F + I+C EF
Sbjct: 49 DIALHLNPRLNIKAFVRNSFLQESWGEEER-NITSFPFSPGMYFEMIIYCDVREF 102
>pdb|3ZXE|A Chain A, Crystal Structure Of Human Galectin-7 In Complex With A
Galactose-Benzylphosphate Inhibitor
pdb|3ZXE|B Chain B, Crystal Structure Of Human Galectin-7 In Complex With A
Galactose-Benzylphosphate Inhibitor
Length = 133
Score = 60.5 bits (145), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
RF VNL+ D ALHFNPR D + V NS WG EE+ V PF+ G+ F +
Sbjct: 29 RFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGV--PFQRGQPFEV 86
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
I + F V + F +R PL + +++
Sbjct: 87 LIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEV 121
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
RF VNL+ D ALHFNPR D + V NS WG EE+ V PF+ G+ F +
Sbjct: 29 RFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGV--PFQRGQPFEV 86
Query: 525 EIFCAPSEFMPV 536
I + F V
Sbjct: 87 LIIASDDGFKAV 98
>pdb|3GAL|A Chain A, Crystal Structure Of Human Galectin-7 In Complex With
Galactosamine
pdb|3GAL|B Chain B, Crystal Structure Of Human Galectin-7 In Complex With
Galactosamine
pdb|4GAL|A Chain A, Crystal Structure Of Human Galectin-7 In Complex With
Lactose
pdb|4GAL|B Chain B, Crystal Structure Of Human Galectin-7 In Complex With
Lactose
pdb|5GAL|A Chain A, Crystal Structure Of Human Galectin-7 In Complex With N-
Acetyllactosamine
pdb|5GAL|B Chain B, Crystal Structure Of Human Galectin-7 In Complex With N-
Acetyllactosamine
pdb|2GAL|A Chain A, Crystal Structure Of Human Galectin-7 In Complex With
Galactose
pdb|2GAL|B Chain B, Crystal Structure Of Human Galectin-7 In Complex With
Galactose
pdb|1BKZ|A Chain A, Crystal Structure Of Human Galectin-7
pdb|1BKZ|B Chain B, Crystal Structure Of Human Galectin-7
Length = 135
Score = 60.5 bits (145), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
RF VNL+ D ALHFNPR D + V NS WG EE+ V PF+ G+ F +
Sbjct: 31 RFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGV--PFQRGQPFEV 88
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
I + F V + F +R PL + +++
Sbjct: 89 LIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEV 123
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
RF VNL+ D ALHFNPR D + V NS WG EE+ V PF+ G+ F +
Sbjct: 31 RFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGV--PFQRGQPFEV 88
Query: 525 EIFCAPSEFMPV 536
I + F V
Sbjct: 89 LIIASDDGFKAV 100
>pdb|3ZXF|A Chain A, High Resolution Structure Of Human Galectin-7
pdb|3ZXF|B Chain B, High Resolution Structure Of Human Galectin-7
Length = 138
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
RF VNL+ D ALHFNPR D + V NS WG EE+ V PF+ G+ F +
Sbjct: 34 RFHVNLLXGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGV--PFQRGQPFEV 91
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
I + F V + F +R PL + +++
Sbjct: 92 LIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEV 126
Score = 52.4 bits (124), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
RF VNL+ D ALHFNPR D + V NS WG EE+ V PF+ G+ F +
Sbjct: 34 RFHVNLLXGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPGV--PFQRGQPFEV 91
Query: 525 EIFCAPSEFMPV 536
I + F V
Sbjct: 92 LIIASDDGFKAV 103
>pdb|2D6K|A Chain A, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd
(Crystal Form 1)
pdb|2D6K|B Chain B, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd
(Crystal Form 1)
pdb|2D6L|X Chain X, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd
(Crystal Form 2)
pdb|2D6M|A Chain A, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With Lactose
pdb|2D6M|B Chain B, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With Lactose
pdb|2D6N|A Chain A, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine
pdb|2D6N|B Chain B, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine
pdb|2D6P|A Chain A, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With T-Antigen
pdb|2D6P|B Chain B, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With T-Antigen
Length = 159
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVN-YCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 188
RF VN S + +DIA HFNPRF+ Y V N+ +N WG EE+ + PF+ G F
Sbjct: 45 RFVVNFQNS-FNGNDIAFHFNPRFEEGGYVVCNTKQNGQWGPEERK--MQMPFQKGMPFE 101
Query: 189 LEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
L SEF VN F + +R P + + + +
Sbjct: 102 LCFLVQRSEFKVMVNKKFFVQYQHRVPYHLVDTIAV 137
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDV-NYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 523
RF VN S + +DIA HFNPRF+ Y V N+ +N WG EE+ + PF+ G F
Sbjct: 45 RFVVNFQNS-FNGNDIAFHFNPRFEEGGYVVCNTKQNGQWGPEERK--MQMPFQKGMPFE 101
Query: 524 LEIFCAPSEF 533
L SEF
Sbjct: 102 LCFLVQRSEF 111
>pdb|2D6O|X Chain X, Crystal Structure Of Mouse Galectin-9 N-Terminal Crd In
Complex With N-Acetyllactosamine Dimer
Length = 159
Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVN-YCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 188
RF VN S + +DIA HFNPRF+ Y V N+ +N WG EE+ + PF+ G F
Sbjct: 45 RFVVNFQNS-FNGNDIAFHFNPRFEEGGYVVCNTKQNGQWGPEERK--MQMPFQKGMPFE 101
Query: 189 LEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
L SEF VN F + +R P + + + +
Sbjct: 102 LCFLVQRSEFKVMVNKKFFVQYQHRVPYHLVDTIAV 137
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDV-NYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 523
RF VN S + +DIA HFNPRF+ Y V N+ +N WG EE+ + PF+ G F
Sbjct: 45 RFVVNFQNS-FNGNDIAFHFNPRFEEGGYVVCNTKQNGQWGPEERK--MQMPFQKGMPFE 101
Query: 524 LEIFCAPSEF 533
L SEF
Sbjct: 102 LCFLVQRSEF 111
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 355 KVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKFNAVE 414
K + ILGI+++ SI+ +TL DLGLDSLM +V+ +L+ + ++ L+ ++++L ++
Sbjct: 2130 KAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREVRQLSLRKLQ 2189
Query: 415 SL 416
L
Sbjct: 2190 EL 2191
>pdb|3AYA|A Chain A, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Thomsen- Friedenreich Antigen
pdb|3AYA|B Chain B, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Thomsen- Friedenreich Antigen
pdb|3AYC|A Chain A, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Gm1 Pentasaccharide
pdb|3AYC|B Chain B, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Gm1 Pentasaccharide
pdb|3AYD|A Chain A, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Tfn
pdb|3AYE|A Chain A, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Lactose
pdb|3AYE|B Chain B, Crystal Structure Of Galectin-3 Crd Domian Complexed With
Lactose
Length = 135
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 38 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 95
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 96 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 127
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 38 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 94
>pdb|3ZSK|A Chain A, Crystal Structure Of Human Galectin-3 Crd With Glycerol
Bound At 0.90 Angstrom Resolution
pdb|3ZSL|A Chain A, Crystal Structure Of Apo Human Galectin-3 Crd At 1.08
Angstrom Resolution, At Cryogenic Temperature
pdb|3ZSM|A Chain A, Crystal Structure Of Apo Human Galectin-3 Crd At 1.25
Angstrom Resolution, At Room Temperature
Length = 138
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 41 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 98
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 99 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 130
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 41 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 97
>pdb|2XG3|A Chain A, Human Galectin-3 In Complex With A Benzamido-N-
Acetyllactoseamine Inhibitor
Length = 138
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 41 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 98
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 99 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 130
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 41 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 97
>pdb|1A3K|A Chain A, X-Ray Crystal Structure Of The Human Galectin-3
Carbohydrate Recognition Domain (Crd) At 2.1 Angstrom
Resolution
Length = 137
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 40 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 97
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 98 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 129
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 40 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 96
>pdb|2NMN|A Chain A, Crystal Structure Of Human Galectin-3 Carbohydrate-
Recognising Domain At 2.45 Angstrom Resolution
pdb|2NMO|A Chain A, Crystal Structure Of Human Galectin-3
Carbohydrate-Recognition Domain At 1.35 Angstrom
Resolution
pdb|2NN8|A Chain A, Crystal Structure Of Human Galectin-3
Carbohydrate-Recognition Domain With Lactose Bound, At
1.35 Angstrom Resolution
pdb|3ZSJ|A Chain A, Crystal Structure Of Human Galectin-3 Crd In Complex With
Lactose At 0.86 Angstrom Resolution
Length = 138
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 41 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 98
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 99 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 130
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 41 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 97
>pdb|3T1L|A Chain A, Crystal Structure Of Human Galectin-3 In Complex With
Methyl 2-O- Acetyl-3-O-Toluoyl-Beta-D-Talopyranoside
pdb|3T1M|A Chain A, Crystal Structure Of Human Galectin-3 Carbohydrate
Recognition Domain In Complex With Methyl
3-Deoxy-2-O-Toluoyl-3-N-Toluoyl-Beta-D- Talopyranoside
Length = 143
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 46 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 103
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 104 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 135
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 46 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 102
>pdb|3AP4|A Chain A, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
pdb|3AP4|B Chain B, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
pdb|3AP4|C Chain C, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
pdb|3AP4|D Chain D, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
pdb|3AP5|A Chain A, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain
pdb|3AP6|A Chain A, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
3'-Sulfate
pdb|3AP6|B Chain B, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
3'-Sulfate
pdb|3AP6|C Chain C, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
3'-Sulfate
pdb|3AP6|D Chain D, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
3'-Sulfate
pdb|3AP7|A Chain A, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Lactose
Sialic Acid
pdb|3APB|A Chain A, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Iodide
pdb|3APB|B Chain B, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With Iodide
pdb|3AP9|A Chain A, Crystal Structure Of The Galectin-8 N-Terminal
Carbohydrate Recognition Domain In Complex With
Lacto-N-Fucopentaose Iii
Length = 154
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 144 DIALHFNPRFDVNYCVR-NSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAV 202
D+A HFNPRF C+ N+ N+ WG EE PFK ++F + I +F AV
Sbjct: 61 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIMVLKDKFQVAV 118
Query: 203 NGTHFCSFPYRYPLYTITRLQILPRVDIFKI 233
NG H + +R I L I +V+I I
Sbjct: 119 NGKHTLLYGHRIGPEKIDTLGIYGKVNIHSI 149
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 479 DIALHFNPRFDVNYCVR-NSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
D+A HFNPRF C+ N+ N+ WG EE PFK ++F + I +F
Sbjct: 61 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIMVLKDKF 114
>pdb|3VKN|A Chain A, Galectin-8 N-Terminal Domain In Free Form
pdb|3VKN|B Chain B, Galectin-8 N-Terminal Domain In Free Form
pdb|3VKO|A Chain A, Galectin-8 N-Terminal Domain In Complex With
Sialyllactosamine
pdb|3VKO|B Chain B, Galectin-8 N-Terminal Domain In Complex With
Sialyllactosamine
Length = 153
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 144 DIALHFNPRFDVNYCVR-NSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAV 202
D+A HFNPRF C+ N+ N+ WG EE PFK ++F + I +F AV
Sbjct: 61 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIMVLKDKFQVAV 118
Query: 203 NGTHFCSFPYRYPLYTITRLQILPRVDIFKI 233
NG H + +R I L I +V+I I
Sbjct: 119 NGKHTLLYGHRIGPEKIDTLGIYGKVNIHSI 149
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 479 DIALHFNPRFDVNYCVR-NSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
D+A HFNPRF C+ N+ N+ WG EE PFK ++F + I +F
Sbjct: 61 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIMVLKDKF 114
>pdb|1KJL|A Chain A, High Resolution X-Ray Structure Of Human Galectin-3 In
Complex With Lacnac
pdb|1KJR|A Chain A, Crystal Structure Of The Human Galectin-3 Crd In Complex
With A 3'- Derivative Of N-Acetyllactosamine
Length = 146
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 143 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEFM 199
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 49 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHFK 106
Query: 200 FAVNGTHFCSFPYRY-PLYTITRLQILPRVDI 230
AVN H + +R L I++L I +D+
Sbjct: 107 VAVNDAHLLQYNHRVKKLNEISKLGISGDIDL 138
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 478 DDIALHFNPRFDVNYCVRNSCRNKV---WGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
+D+A HFNPRF+ N C K+ WG EE+ + PF+ G+ F +++ P F
Sbjct: 49 NDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSVF--PFESGKPFKIQVLVEPDHF 105
>pdb|2YV8|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Galectin-8
pdb|2YXS|A Chain A, Crystal Sturcture Of N-Terminal Domain Of Human Galectin-8
With D- Lactose
Length = 164
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 144 DIALHFNPRFDVNYC-VRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAV 202
D+A HFNPRF C V N+ N+ WG EE PFK ++F + I +F AV
Sbjct: 68 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIXVLKDKFQVAV 125
Query: 203 NGTHFCSFPYRYPLYTITRLQILPRVDIFKI 233
NG H + +R I L I +V+I I
Sbjct: 126 NGKHTLLYGHRIGPEKIDTLGIYGKVNIHSI 156
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 479 DIALHFNPRFDVNYC-VRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEF 533
D+A HFNPRF C V N+ N+ WG EE PFK ++F + I +F
Sbjct: 68 DVAFHFNPRFKRAGCIVCNTLINEKWGREEIT--YDTPFKREKSFEIVIXVLKDKF 121
>pdb|2CG5|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase-
Phosphopantetheinyl Transferase In Complex With
Cytosolic Acyl Carrier Protein And Coenzyme A
Length = 91
Score = 48.5 bits (114), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 43/62 (69%)
Query: 355 KVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKFNAVE 414
+ + ILGI+++ +++ ++L+DLGLD+LM+ +V+ L+ + N+ L+ ++++L ++
Sbjct: 13 EAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQLTLRKLQ 72
Query: 415 SL 416
L
Sbjct: 73 EL 74
>pdb|2PNG|A Chain A, Type I Rat Fatty Acid Synthase Acyl Carrier Protein (Acp)
Domain
Length = 89
Score = 48.1 bits (113), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 9/77 (11%)
Query: 355 KVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKFNAVE 414
K + ILGI+++ I+ ++L+DLGLDSLM +V+ +L+ + ++ L ++++L ++
Sbjct: 11 KAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLRKLQ 70
Query: 415 SL---------LKVPKS 422
+ L PKS
Sbjct: 71 EMSSKAGSDTELAAPKS 87
>pdb|1QMJ|A Chain A, Cg-16, A Homodimeric Agglutinin From Chicken Liver
pdb|1QMJ|B Chain B, Cg-16, A Homodimeric Agglutinin From Chicken Liver
Length = 132
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 10/98 (10%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
F+VN+ G D + LHFNPRF DVN V NS + WGEE++ A PF+ G+
Sbjct: 29 FSVNV---GKDSSTLMLHFNPRFDCHGDVNTVVCNSKEDGTWGEEDRKA--DFPFQQGDK 83
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
+ I +E V F FP R + I L +
Sbjct: 84 VEICISFDAAEVKVKVPEVEF-EFPNRLGMEKIQYLAV 120
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
F+VN+ G D + LHFNPRF DVN V NS + WGEE++ A PF+ G+
Sbjct: 29 FSVNV---GKDSSTLMLHFNPRFDCHGDVNTVVCNSKEDGTWGEEDRKA--DFPFQQGD 82
>pdb|3DUI|A Chain A, Crystal Structure Of The Oxidized Cg-1b: An
AdhesionGROWTH- Regulatory Lectin From Chicken
pdb|3DUI|B Chain B, Crystal Structure Of The Oxidized Cg-1b: An
AdhesionGROWTH- Regulatory Lectin From Chicken
Length = 135
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 108 KIRKEWTVEDVINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSC 163
K + TV+ +I N S F +NL G D + LHFNPRF DVN V NS
Sbjct: 14 KPGQRLTVKGIIAPNAKS-----FVMNL---GKDSTHLGLHFNPRFDAHGDVNLIVCNSK 65
Query: 164 RNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPL 216
+ + WG E++ PF+ G + PS+ + G F SFP R L
Sbjct: 66 KMEEWGTEQRETVF--PFQKGAPIEITFSINPSDLTVHLPGHQF-SFPNRLGL 115
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 521
F +NL G D + LHFNPRF DVN V NS + + WG E++ PF+ G
Sbjct: 32 FVMNL---GKDSTHLGLHFNPRFDAHGDVNLIVCNSKKMEEWGTEQRETVF--PFQKGAP 86
Query: 522 FVLEIFCAPSEF 533
+ PS+
Sbjct: 87 IEITFSINPSDL 98
>pdb|2WSU|A Chain A, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre
pdb|2WSU|B Chain B, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre
pdb|2WSU|C Chain C, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre
pdb|2WSU|D Chain D, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre
pdb|2WSV|A Chain A, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre Complexed With Lactose
pdb|2WT0|A Chain A, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre Complexed With N-Acetyl-Lactosamine
pdb|2WT1|A Chain A, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre Complexed With Lacto-N-Neo-Tetraose
pdb|2WT2|A Chain A, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre Complexed With Tri(N-Acetyl-Lactosamine)
pdb|2WT2|B Chain B, Galectin Domain Of Porcine Adenovirus Type 4 Nadc-1
Isolate Fibre Complexed With Tri(N-Acetyl-Lactosamine)
Length = 343
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 21/143 (14%)
Query: 121 TNDLSALVFRFAVNLVISGH-DDDDIALHFNPRFDVN---YCVRNSCRNKVWGEEEKAAY 176
T + L F VNLV H D ++ALHFN F + + N+ N WG E +
Sbjct: 205 TGTPTPLAEFFIVNLVYDLHYDSKNVALHFNVGFTSDSKGHIACNARMNGTWGSEITVS- 263
Query: 177 VSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTK 236
PF+ G+ F L+I ++F V+ F YR L +D Q K
Sbjct: 264 -DFPFQRGKPFTLQILTREADFQVLVDKQPLTQFQYR-----------LKELD----QIK 307
Query: 237 LLHSYPATTQDDLVAQLKDQPLY 259
+H + Q L Q+ D P++
Sbjct: 308 YVHMFGHVVQTHLEHQVPDTPVF 330
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 456 TNDLSALVFRFAVNLVISGH-DDDDIALHFNPRFDVN---YCVRNSCRNKVWGEEEKAAY 511
T + L F VNLV H D ++ALHFN F + + N+ N WG E +
Sbjct: 205 TGTPTPLAEFFIVNLVYDLHYDSKNVALHFNVGFTSDSKGHIACNARMNGTWGSEITVS- 263
Query: 512 VSNPFKLGENFVLEIFCAPSEF 533
PF+ G+ F L+I ++F
Sbjct: 264 -DFPFQRGKPFTLQILTREADF 284
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 114 TVEDVINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRFDV---NYCVRNSCRNKV-WG 169
T ++ L+ F ++LV +ALHFN R + + V NS WG
Sbjct: 44 TGASIVLEGTLTPSAVFFTLDLVTG---PASLALHFNVRLPLEGEKHIVCNSREGSSNWG 100
Query: 170 EEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
EE + PF+ + FVL I + VNG FP R L ITR +
Sbjct: 101 EEVRPQ--EFPFEREKPFVLVIVIQSDTYQITVNGKPLVDFPQR--LQGITRASL 151
>pdb|3AK0|A Chain A, Crystal Structure Of Ancestral Congerin Con-Anc'-N28k
pdb|3AK0|B Chain B, Crystal Structure Of Ancestral Congerin Con-Anc'-N28k
Length = 135
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 108 KIRKEWTVEDVINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSC 163
K+ TV V+N+N RF++N+ G D IALH + RF D N V NS
Sbjct: 13 KLGMYLTVGGVVNSN-----AKRFSINV---GESTDSIALHIDHRFSYGADQNTIVLNSM 64
Query: 164 RNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRY 214
+ W +E+++ + PF GE+F + I F + H FP R+
Sbjct: 65 VDDGWQQEQRSK--NFPFTAGEHFQITITFDIDTFYIQLPDGHKVEFPNRH 113
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 9/66 (13%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
RF++N+ G D IALH + RF D N V NS + W +E+++ + PF GE
Sbjct: 30 RFSINV---GESTDSIALHIDHRFSYGADQNTIVLNSMVDDGWQQEQRSK--NFPFTAGE 84
Query: 521 NFVLEI 526
+F + I
Sbjct: 85 HFQITI 90
>pdb|3AJZ|A Chain A, Crystal Structure Of Ancestral Congerin Con-Anc
Length = 135
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 108 KIRKEWTVEDVINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSC 163
K+ TV V+N+N RF++N+ G D IALH + RF D N V NS
Sbjct: 13 KLGMYLTVGGVVNSN-----ANRFSINV---GESTDSIALHIDHRFSYGADQNTIVLNSM 64
Query: 164 RNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRY 214
+ W +E+++ + PF GE+F + I F + H FP R+
Sbjct: 65 VDDGWQQEQRSK--NFPFTAGEHFQITITFDIDTFYIQLPDGHKVEFPNRH 113
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 10/78 (12%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
RF++N+ G D IALH + RF D N V NS + W +E+++ + PF GE
Sbjct: 30 RFSINV---GESTDSIALHIDHRFSYGADQNTIVLNSMVDDGWQQEQRSK--NFPFTAGE 84
Query: 521 NFVLEI-FCAPSEFMPVP 537
+F + I F + ++ +P
Sbjct: 85 HFQITITFDIDTFYIQLP 102
>pdb|3AJY|A Chain A, Crystal Structure Of Ancestral Congerin Con-Anc
pdb|3AJY|C Chain C, Crystal Structure Of Ancestral Congerin Con-Anc
Length = 135
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 108 KIRKEWTVEDVINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSC 163
K+ K TV VIN RF++N+ G + ++LH + RF D N V NS
Sbjct: 13 KVGKFLTVGGVINN-----YAKRFSINV---GESTNSLSLHLDHRFNYGADQNTIVLNSM 64
Query: 164 RNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRY 214
N W E+++ + PF GE F + I ++F + H FP RY
Sbjct: 65 VNSGWETEQRSK--NFPFSAGEYFEITITFDTNKFYIELLDGHKLEFPNRY 113
>pdb|2ZKN|A Chain A, X-Ray Structure Of Mutant Galectin-1LACTOSE COMPLEX
pdb|2ZKN|B Chain B, X-Ray Structure Of Mutant Galectin-1LACTOSE COMPLEX
Length = 134
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
F +NL G D ++++LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLSLHFNPRFNAHGDANTIVSNSKDGGAWGTEQREAVF--PFQPGSV 84
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRL 222
+ I + + + FP R L I +
Sbjct: 85 AEVSITFDQANLTVKLPDGYEFKFPNRLNLEAINYM 120
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D ++++LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLSLHFNPRFNAHGDANTIVSNSKDGGAWGTEQREAVF--PFQPG 82
>pdb|1SLT|A Chain A, Structure Of S-Lectin, A Developmentally Regulated
Vertebrate Beta-Galactoside Binding Protein
pdb|1SLT|B Chain B, Structure Of S-Lectin, A Developmentally Regulated
Vertebrate Beta-Galactoside Binding Protein
Length = 134
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
F +NL G DD+++ LHFNPRF DVN V NS WG E++ + PF+ G
Sbjct: 30 FLLNL---GKDDNNLCLHFNPRFNAHGDVNTIVCNSKDAGAWGAEQRESAF--PFQPGSV 84
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQ 223
+ I ++ + + FP R L I L
Sbjct: 85 VEVXISFNQTDLTIKLPDGYEFKFPNRLNLEAINYLS 121
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G DD+++ LHFNPRF DVN V NS WG E++ + PF+ G
Sbjct: 30 FLLNL---GKDDNNLCLHFNPRFNAHGDVNTIVCNSKDAGAWGAEQRESAF--PFQPG 82
>pdb|1HLC|A Chain A, X-Ray Crystal Structure Of The Human Dimeric S-Lac Lectin,
L-14-Ii, In Complex With Lactose At 2.9 Angstroms
Resolution
pdb|1HLC|B Chain B, X-Ray Crystal Structure Of The Human Dimeric S-Lac Lectin,
L-14-Ii, In Complex With Lactose At 2.9 Angstroms
Resolution
Length = 129
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 5/94 (5%)
Query: 131 FAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLE 190
F +NL G D + LHFNPRF + V NS WG+E++ ++ F G
Sbjct: 28 FVINL---GQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQREDHLC--FSPGSEVKFT 82
Query: 191 IFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
+ +F + H +FP R ++ L +
Sbjct: 83 VTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSV 116
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 466 FAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYV 512
F +NL G D + LHFNPRF + V NS WG+E++ ++
Sbjct: 28 FVINL---GQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQREDHL 71
>pdb|1SLA|A Chain A, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLA|B Chain B, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|A Chain A, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|B Chain B, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|C Chain C, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLB|D Chain D, X-ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|A Chain A, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|B Chain B, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|C Chain C, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
pdb|1SLC|D Chain D, X-Ray Crystallography Reveals Crosslinking Of Mammalian
Lectin (Galectin-1) By Biantennary Complex Type
Saccharides
Length = 134
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 15/100 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
F +NL G DD+++ LHFNPRF DVN V NS WG E++ + PF+ G
Sbjct: 30 FLLNL---GKDDNNLCLHFNPRFNAHGDVNTIVCNSKDAGAWGAEQRESAF--PFQPGS- 83
Query: 187 FVLEIFCAPSEFMFAV---NGTHFCSFPYRYPLYTITRLQ 223
V+E+ + ++ + +G F FP R L I L
Sbjct: 84 -VVEVCISFNQTDLTIKLPDGYEF-KFPNRLNLEAINYLS 121
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G DD+++ LHFNPRF DVN V NS WG E++ + PF+ G
Sbjct: 30 FLLNL---GKDDNNLCLHFNPRFNAHGDVNTIVCNSKDAGAWGAEQRESAF--PFQPG 82
>pdb|3M2M|A Chain A, Rat Galectin-1 Complex With Lactose
pdb|3M2M|B Chain B, Rat Galectin-1 Complex With Lactose
pdb|3M2M|C Chain C, Rat Galectin-1 Complex With Lactose
pdb|3M2M|D Chain D, Rat Galectin-1 Complex With Lactose
pdb|3M2M|E Chain E, Rat Galectin-1 Complex With Lactose
pdb|3M2M|F Chain F, Rat Galectin-1 Complex With Lactose
pdb|3M2M|G Chain G, Rat Galectin-1 Complex With Lactose
pdb|3M2M|H Chain H, Rat Galectin-1 Complex With Lactose
Length = 134
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 9/96 (9%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
F +NL G D +++ LHFNPRF D N V NS + WG E++ PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGTWGTEQRETAF--PFQPGSI 84
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRL 222
+ I ++ + H FP R + I +
Sbjct: 85 TEVXITFDQADLTIKLPDGHEFKFPNRLNMEAINYM 120
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS + WG E++ PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGTWGTEQRETAF--PFQPG 82
>pdb|1GAN|A Chain A, Complex Of Toad Ovary Galectin With N-Acetylgalactose
pdb|1GAN|B Chain B, Complex Of Toad Ovary Galectin With N-Acetylgalactose
Length = 134
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
FAVNL G D + LHFN RF DVN V NS WG E++ PF+ G
Sbjct: 31 FAVNL---GEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREGVF--PFQQGAE 85
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
++ + + + SFP R L +I L +
Sbjct: 86 VMVCFEYQTDKIIIKFSSGDQFSFPVRKVLPSIPFLSL 123
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
FAVNL G D + LHFN RF DVN V NS WG E++ PF+ G
Sbjct: 31 FAVNL---GEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREGVF--PFQQG 83
>pdb|1A78|A Chain A, Complex Of Toad Ovary Galectin With Thio-Digalactose
pdb|1A78|B Chain B, Complex Of Toad Ovary Galectin With Thio-Digalactose
Length = 134
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
FAVNL G D + LHFN RF DVN V NS WG E++ PF+ G
Sbjct: 31 FAVNL---GEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREEVF--PFQQGAE 85
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
++ + + + SFP R L +I L +
Sbjct: 86 VMVCFEYQTQKIIIKFSSGDQFSFPVRKVLPSIPFLSL 123
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
FAVNL G D + LHFN RF DVN V NS WG E++ PF+ G
Sbjct: 31 FAVNL---GEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREEVF--PFQQG 83
>pdb|3T2T|A Chain A, Crystal Structure Of Human Galectin-1 In Complex With
Methyl 2-O- Acetyl-3-O-Toluoyl-Beta-D-Talopyranoside
pdb|3T2T|B Chain B, Crystal Structure Of Human Galectin-1 In Complex With
Methyl 2-O- Acetyl-3-O-Toluoyl-Beta-D-Talopyranoside
Length = 135
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 31 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 83
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 31 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 83
>pdb|1W6M|A Chain A, X-Ray Crystal Structure Of C2s Human Galectin-1 Complexed
With Galactose
pdb|1W6N|A Chain A, X-Ray Crystal Structure Of C2s Human Galectin-1
pdb|1W6O|A Chain A, X-Ray Crystal Structure Of C2s Human Galectin-1 Complexed
With Lactose
pdb|1W6P|A Chain A, X-Ray Crystal Structure Of C2s Human Galectin-1 Complexed
With N-Acetyl-Lactosamine
Length = 134
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS + WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAVF--PFQPG 82
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS + WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAVF--PFQPG 82
>pdb|1W6M|B Chain B, X-Ray Crystal Structure Of C2s Human Galectin-1 Complexed
With Galactose
pdb|1W6N|B Chain B, X-Ray Crystal Structure Of C2s Human Galectin-1
pdb|1W6O|B Chain B, X-Ray Crystal Structure Of C2s Human Galectin-1 Complexed
With Lactose
pdb|1W6P|B Chain B, X-Ray Crystal Structure Of C2s Human Galectin-1 Complexed
With N-Acetyl-Lactosamine
Length = 134
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS + WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAVF--PFQPG 82
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS + WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAVF--PFQPG 82
>pdb|3OY8|A Chain A, Crystal Structure Of Human Galectin-1 In Complex With
Lactobionic Acid
pdb|3OY8|B Chain B, Crystal Structure Of Human Galectin-1 In Complex With
Lactobionic Acid
pdb|3OYW|A Chain A, Crystal Structure Of Human Galectin-1 In Complex With
Thiodigalactoside
pdb|3OYW|B Chain B, Crystal Structure Of Human Galectin-1 In Complex With
Thiodigalactoside
Length = 134
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
>pdb|1GZW|A Chain A, X-Ray Crystal Structure Of Human Galectin-1
Length = 134
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
>pdb|1W6Q|A Chain A, X-Ray Crystal Structure Of R111h Human Galectin-1
Length = 134
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
>pdb|1GZW|B Chain B, X-Ray Crystal Structure Of Human Galectin-1
pdb|2KM2|A Chain A, Galectin-1 Dimer
pdb|2KM2|B Chain B, Galectin-1 Dimer
Length = 134
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
>pdb|2JJ6|A Chain A, Crystal Structure Of The Putative Carbohydrate Recognition
Domain Of The Human Galectin-Related Protein
pdb|2JJ6|B Chain B, Crystal Structure Of The Putative Carbohydrate Recognition
Domain Of The Human Galectin-Related Protein
Length = 134
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 111 KEWTVEDVINTNDLSALVFRFAVNLVISGHDDD--DIALHFNPRFDVNYCVRNSCRNKVW 168
K+ V +++ N S FA++L +D D+A+ F +RNSC +
Sbjct: 15 KKVLVMGIVDLNPES-----FAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGER 69
Query: 169 GEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRV 228
GEE+ +A PF + F +EI C F V+G F + R+Q L +
Sbjct: 70 GEEQ-SAIPYFPFIPDQPFRVEILCEHPRFRVFVDGHQLFDFYH--------RIQTLSAI 120
Query: 229 DIFKIQTKL 237
D KI L
Sbjct: 121 DTIKINGDL 129
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 466 FAVNLVISGHDDD--DIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 523
FA++L +D D+A+ F +RNSC + GEE+ +A PF + F
Sbjct: 30 FAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQ-SAIPYFPFIPDQPFR 88
Query: 524 LEIFCAPSEF 533
+EI C F
Sbjct: 89 VEILCEHPRF 98
>pdb|1W6Q|B Chain B, X-Ray Crystal Structure Of R111h Human Galectin-1
Length = 134
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 131 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 184
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 9/58 (15%)
Query: 466 FAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLG 519
F +NL G D +++ LHFNPRF D N V NS WG E++ A PF+ G
Sbjct: 30 FVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVF--PFQPG 82
>pdb|3B9C|A Chain A, Crystal Structure Of Human Grp Crd
pdb|3B9C|D Chain D, Crystal Structure Of Human Grp Crd
pdb|3B9C|C Chain C, Crystal Structure Of Human Grp Crd
pdb|3B9C|B Chain B, Crystal Structure Of Human Grp Crd
Length = 144
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 111 KEWTVEDVINTNDLSALVFRFAVNLVISGHDDD--DIALHFNPRFDVNYCVRNSCRNKVW 168
K+ V +++ N S FA++L +D D+A+ F +RNSC +
Sbjct: 24 KKVLVMGIVDLNPES-----FAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGER 78
Query: 169 GEEEKAAYVSNPFKLGENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRV 228
GEE+ +A PF + F +EI C F V+G F + R+Q L +
Sbjct: 79 GEEQ-SAIPYFPFIPDQPFRVEILCEYPRFRVFVDGHQLFDFYH--------RIQTLSAI 129
Query: 229 DIFKIQTKL 237
D KI L
Sbjct: 130 DTIKINGDL 138
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Query: 466 FAVNLVISGHDDD--DIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFV 523
FA++L +D D+A+ F +RNSC + GEE+ +A PF + F
Sbjct: 39 FAISLTCGDSEDPPADVAIELKAVFTDRQLLRNSCISGERGEEQ-SAIPYFPFIPDQPFR 97
Query: 524 LEIFCAPSEF 533
+EI C F
Sbjct: 98 VEILCEYPRF 107
>pdb|3EJB|A Chain A, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|C Chain C, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|E Chain E, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|G Chain G, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|A Chain A, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|C Chain C, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|E Chain E, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|G Chain G, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|A Chain A, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|C Chain C, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|E Chain E, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|G Chain G, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 97
Score = 35.0 bits (79), Expect = 0.11, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 36/56 (64%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKEL 408
V+K+IG+ LG++ ++++ + DLG DSL ++ L+ +F+ + +E+ +++
Sbjct: 27 VKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKI 82
>pdb|1HDK|A Chain A, Charcot-Leyden Crystal Protein- Pcmbs Complex
Length = 141
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 141 DDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMF 200
++ DI HF F V NS W ++ ++ + PF+ G+ F L I P ++
Sbjct: 45 EESDIVFHFQVCFG-RRVVMNSREYGAWKQQVESK--NMPFQDGQEFELSISVLPDKYQV 101
Query: 201 AVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTKLL 238
VNG +F +R + +Q+ + + K L
Sbjct: 102 MVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSYL 139
>pdb|1QKQ|A Chain A, Charcot-Leyden Crystal Protein - Mannose Complex
pdb|1G86|A Chain A, Charcot-Leyden Crystal ProteinN-Ethylmaleimide Complex
pdb|1LCL|A Chain A, Charcot-Leyden Crystal Protein
Length = 142
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 141 DDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCAPSEFMF 200
++ DI HF F V NS W ++ ++ + PF+ G+ F L I P ++
Sbjct: 46 EESDIVFHFQVCFG-RRVVMNSREYGAWKQQVESK--NMPFQDGQEFELSISVLPDKYQV 102
Query: 201 AVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTKLL 238
VNG +F +R + +Q+ + + K L
Sbjct: 103 MVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSYL 140
>pdb|1L0I|A Chain A, Crystal Structure Of Butyryl-Acp I62m Mutant
Length = 78
Score = 34.3 bits (77), Expect = 0.16, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 36/56 (64%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKEL 408
V+K+IG+ LG++ ++++ + DLG DSL ++ L+ +F+ + +E+ +++
Sbjct: 8 VKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKM 63
>pdb|1L0H|A Chain A, Crystal Structure Of Butyryl-Acp From E.Coli
pdb|2FHS|C Chain C, Structure Of Acyl Carrier Protein Bound To Fabi, The Enoyl
Reductase From Escherichia Coli
pdb|3NY7|B Chain B, Stas Domain Of Ychm Bound To Acp
Length = 78
Score = 34.3 bits (77), Expect = 0.18, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 36/56 (64%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKEL 408
V+K+IG+ LG++ ++++ + DLG DSL ++ L+ +F+ + +E+ +++
Sbjct: 8 VKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKI 63
>pdb|2BHY|A Chain A, Crystal Structure Of Deinococcus Radiodurans
Maltooligosyltrehalose Trehalohydrolase In Complex With
Trehalose
pdb|2BHZ|A Chain A, Crystal Structure Of Deinococcus Radiodurans
Maltooligosyltrehalose Trehalohydrolase In Complex With
Maltose
pdb|2BXY|A Chain A, Is Radiation Damage Dependent On The Dose-Rate Used During
Macromolecular Crystallography Data Collection
pdb|2BXZ|A Chain A, Is Radiation Damage Dependent On The Dose-Rate Used During
Macromolecular Crystallography Data Collection
pdb|2BY0|A Chain A, Is Radiation Damage Dependent On The Dose-Rate Used During
Macromolecular Crystallography Data Collection
pdb|2BY1|A Chain A, Is Radiation Damage Dependent On The Dose-Rate Used During
Macromolecular Crystallography Data Collection
pdb|2BY2|A Chain A, Is Radiation Damage Dependent On The Dose-Rate Used During
Macromolecular Crystallography Data Collection
pdb|2BY3|A Chain A, Is Radiation Damage Dependent On The Dose-Rate Used During
Macromolecular Crystallography Data Collection
Length = 602
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 347 KQENVTVQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIK 406
++EN+T GD+L ++ +T + L +LG D+ A+VK + L E +
Sbjct: 531 QRENLTTGH-DGDVLWVRTVTGAGERVLLWNLGQDTRAVAEVKLPFTVPRRLLLHTEGRE 589
Query: 407 ELKFNAVESLL 417
+L A E++L
Sbjct: 590 DLTLGAGEAVL 600
>pdb|1T8K|A Chain A, Crystal Structure Of Apo Acyl Carrier Protein From E. Coli
pdb|2FAC|A Chain A, Crystal Structure Of E. Coli Hexanoyl-acp
pdb|2FAC|B Chain B, Crystal Structure Of E. Coli Hexanoyl-acp
pdb|2FAD|A Chain A, Crystal Structure Of E. Coli Heptanoyl-Acp
pdb|2FAD|B Chain B, Crystal Structure Of E. Coli Heptanoyl-Acp
pdb|2FAE|A Chain A, Crystal Structure Of E. Coli Decanoyl-Acp
pdb|2FAE|B Chain B, Crystal Structure Of E. Coli Decanoyl-Acp
pdb|1ACP|A Chain A, Refinement Of The Nmr Structures For Acyl Carrier Protein
With Scalar Coupling Data
pdb|4ETW|D Chain D, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
pdb|4ETW|B Chain B, Structure Of The Enzyme-Acp Substrate Gatekeeper Complex
Required For Biotin Synthesis
Length = 77
Score = 34.3 bits (77), Expect = 0.19, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 36/56 (64%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKEL 408
V+K+IG+ LG++ ++++ + DLG DSL ++ L+ +F+ + +E+ +++
Sbjct: 7 VKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKI 62
>pdb|2BHU|A Chain A, Crystal Structure Of Deinococcus Radiodurans
Maltooligosyltrehalose Trehalohydrolase
Length = 602
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 347 KQENVTVQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIK 406
++EN+T GD+L ++ +T + L +LG D+ A+VK + L E +
Sbjct: 531 QRENLTTGH-DGDVLWVRTVTGAGERVLLWNLGQDTRAVAEVKLPFTVPRRLLLHTEGRE 589
Query: 407 ELKFNAVESLL 417
+L A E++L
Sbjct: 590 DLTLGAGEAVL 600
>pdb|2K92|A Chain A, Structural Modification Of Acyl Carrier Protein By Butyryl
Group
pdb|2K93|A Chain A, Structural Modification Of Acyl Carrier Protein By Butyryl
Group
pdb|2K94|A Chain A, Structural Modification Of Acyl Carrier Protein By Butyryl
Group
Length = 77
Score = 33.5 bits (75), Expect = 0.30, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKEL 408
V+K+IG LG++ ++++ + DLG DSL ++ L+ +F+ + +E+ +++
Sbjct: 7 VKKIIGQQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKI 62
>pdb|1OR5|A Chain A, Solution Structure Of The Holo-Form Of The Frenolicin Acyl
Carrier Protein, Minimized Mean Structure
Length = 83
Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 377 DLGLDSLMAADVKNVLQSKFNISLTNEQIKEL 408
DLG DSL + VLQ ++ I+LT+E + L
Sbjct: 35 DLGYDSLALLETAAVLQQRYGIALTDETVGRL 66
>pdb|2LK4|A Chain A, Structural And Mechanistic Insights Into The Interaction
Between Pat Pyk2 And Paxillin Ld Motif
Length = 135
Score = 30.4 bits (67), Expect = 2.7, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 315 VKQENVTVQKVIG--DILAPAFCKRYKNVTSGDVKQENVTVQKVIGDI-LGIQN-ITSIS 370
VK +T++K+IG D L P+ + G K N + ++I + L QN +TS+S
Sbjct: 40 VKNVGLTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS 99
Query: 371 DSATLSDLGLDSLMAADVKNVLQS 394
+ A L +A D KN+L +
Sbjct: 100 EEAKRQMLTASHTLAVDAKNLLDA 123
>pdb|2F6P|A Chain A, Benm Effector Binding Domain- Semet Derivative
pdb|2F6P|B Chain B, Benm Effector Binding Domain- Semet Derivative
Length = 232
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 402 NEQIKELKFNAVESLLKVPKSFVMRILLKEDHFSVSIDDEKFINYKYDRGVSIN 455
E +KE + +A LK+ + R LL+ + V++ +N D+GV +N
Sbjct: 52 TEALKEGRIDAGFGRLKISDPAIKRTLLRNERLXVAVHASHPLNQXKDKGVHLN 105
>pdb|3M7I|A Chain A, Crystal Structure Of Transketolase In Complex With
Thiamine Diphosphate, Ribose-5-Phosphate(Pyranose Form)
And Magnesium Ion
pdb|3M34|A Chain A, Crystal Structure Of Transketolase In Complex With Thiamin
D And Calcium Ion
pdb|3M6L|A Chain A, Crystal Structure Of Transketolase In Complex With
Thiamine Diphosphate, Ribose-5-Phosphate And Calcium Ion
Length = 635
Score = 28.9 bits (63), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 292 PNISFHTSVRFKYKAESNVTSGDV-------KQENVTVQKVIGDILAPAFCKRYKNVTSG 344
PNISFH K + ES V GD+ K E ++++ +L P F K +
Sbjct: 279 PNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNK----IAYP 334
Query: 345 DVKQENVTVQKVIGDILGI 363
D K +++ + G+IL +
Sbjct: 335 DFKGKDLATRDSNGEILNV 353
>pdb|3GM1|A Chain A, Crystal Structure Of The Focal Adhesion Targeting (Fat)
Domain Of Pyk2 In Complex With Paxillin Ld4
Motif-Derived Peptides
pdb|3GM1|B Chain B, Crystal Structure Of The Focal Adhesion Targeting (Fat)
Domain Of Pyk2 In Complex With Paxillin Ld4
Motif-Derived Peptides
pdb|3GM2|A Chain A, Crystal Structure Of The Focal Adhesion Targeting (Fat)
Domain Of Pyk2
pdb|3GM3|A Chain A, Crystal Structure Of The Focal Adhesion Targeting (Fat)
Domain Of Pyk2
Length = 153
Score = 28.9 bits (63), Expect = 7.1, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 315 VKQENVTVQKVIG--DILAPAFCKRYKNVTSGDVKQENVTVQKVIGDI-LGIQN-ITSIS 370
VK +T++K+IG D L P+ + G K N + ++I + L QN +TS+S
Sbjct: 54 VKNVGLTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS 113
Query: 371 DSATLSDLGLDSLMAADVKNVLQS 394
+ L +A D KN+L +
Sbjct: 114 EECKRQMLTASHTLAVDAKNLLDA 137
>pdb|3L84|A Chain A, High Resolution Crystal Structure Of Transketolase From
Campylobacter Jejuni Subsp. Jejuni Nctc 11168
Length = 632
Score = 28.9 bits (63), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Query: 292 PNISFHTSVRFKYKAESNVTSGDV-------KQENVTVQKVIGDILAPAFCKRYKNVTSG 344
PNISFH K + ES V GD+ K E ++++ +L P F K +
Sbjct: 276 PNISFHIPQASKIRFESAVELGDLEEAKWKDKLEKSAKKELLERLLNPDFNK----IAYP 331
Query: 345 DVKQENVTVQKVIGDILGI 363
D K +++ + G+IL +
Sbjct: 332 DFKGKDLATRDSNGEILNV 350
>pdb|2EHS|A Chain A, Crystal Structure Of Acyl Carrier Protein From Aquifex
Aeolicus (Form 1)
pdb|2EHT|A Chain A, Crystal Structure Of Acyl Carrier Protein From Aquifex
Aeolicus (Form 2)
Length = 77
Score = 28.9 bits (63), Expect = 7.9, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 32/57 (56%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELK 409
V+++I + LG++ ++ + DLG DSL ++ + +F I + +E ++++
Sbjct: 6 VKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQ 62
>pdb|3U3C|A Chain A, Structural Basis For The Interaction Of Pyk2 Pat Domain
With Paxillin Ld Motifs
pdb|3U3F|A Chain A, Structural Basis For The Interaction Of Pyk2 Pat Domain
With Paxillin Ld Motifs
pdb|3U3F|B Chain B, Structural Basis For The Interaction Of Pyk2 Pat Domain
With Paxillin Ld Motifs
pdb|3U3F|C Chain C, Structural Basis For The Interaction Of Pyk2 Pat Domain
With Paxillin Ld Motifs
pdb|3U3F|D Chain D, Structural Basis For The Interaction Of Pyk2 Pat Domain
With Paxillin Ld Motifs
Length = 139
Score = 28.9 bits (63), Expect = 8.1, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 315 VKQENVTVQKVIG--DILAPAFCKRYKNVTSGDVKQENVTVQKVIGDI-LGIQN-ITSIS 370
VK +T++K+IG D L P+ + G K N + ++I + L QN +TS+S
Sbjct: 44 VKNVGLTLRKLIGSVDDLLPSLPSSSRTEIEGTQKLLNKDLAELINKMRLAQQNAVTSLS 103
Query: 371 DSATLSDLGLDSLMAADVKNVLQS 394
+ L +A D KN+L +
Sbjct: 104 EECKRQMLTASHTLAVDAKNLLDA 127
>pdb|2F6G|A Chain A, Benm Effector Binding Domain
pdb|2F6G|B Chain B, Benm Effector Binding Domain
pdb|2F78|A Chain A, Benm Effector Binding Domain With Its Effector Benzoate
pdb|2F78|B Chain B, Benm Effector Binding Domain With Its Effector Benzoate
pdb|2F7A|A Chain A, Benm Effector Binding Domain With Its Effector,
Cis,Cis-Muconate
pdb|2F7A|B Chain B, Benm Effector Binding Domain With Its Effector,
Cis,Cis-Muconate
pdb|2F8D|A Chain A, Benm Effector-binding Domain Crystallized From High Ph
Conditions
pdb|2F8D|B Chain B, Benm Effector-binding Domain Crystallized From High Ph
Conditions
pdb|2F97|A Chain A, Effector Binding Domain Of Benm (Crystals Generated From
High Ph Conditions)
Length = 232
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 402 NEQIKELKFNAVESLLKVPKSFVMRILLKEDHFSVSIDDEKFINYKYDRGVSIN 455
E +KE + +A LK+ + R LL+ + V++ +N D+GV +N
Sbjct: 52 TEALKEGRIDAGFGRLKISDPAIKRTLLRNERLMVAVHASHPLNQMKDKGVHLN 105
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,406,435
Number of Sequences: 62578
Number of extensions: 697251
Number of successful extensions: 1694
Number of sequences better than 100.0: 89
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1502
Number of HSP's gapped (non-prelim): 150
length of query: 539
length of database: 14,973,337
effective HSP length: 104
effective length of query: 435
effective length of database: 8,465,225
effective search space: 3682372875
effective search space used: 3682372875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)