RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11967
(539 letters)
>d2gala_ b.29.1.3 (A:) Galectin-7 {Human (Homo sapiens) [TaxId:
9606]}
Length = 133
Score = 109 bits (274), Expect = 4e-29
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
RF VNL+ D ALHFNPR D + V NS WG EE+ PF+ G+ F +
Sbjct: 29 RFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPG--VPFQRGQPFEV 86
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQ 234
I + F V + F +R PL + +++ V + ++
Sbjct: 87 LIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQLDSVR 131
Score = 75.3 bits (185), Expect = 6e-17
Identities = 27/70 (38%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
RF VNL+ D ALHFNPR D + V NS WG EE+ PF+ G+ F +
Sbjct: 29 RFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGSWGREERGPG--VPFQRGQPFEV 86
Query: 525 EIFCAPSEFM 534
I + F
Sbjct: 87 LIIASDDGFK 96
Score = 30.6 bits (69), Expect = 0.16
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 6/40 (15%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFK 303
+ + G VP F +NL G+ + + H + R
Sbjct: 16 VLRIRGLVPPNASRFHVNLLCGE--EQGSDAALHFNPRLD 53
Score = 28.0 bits (62), Expect = 1.7
Identities = 5/28 (17%), Positives = 16/28 (57%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
+ F + I+ +D F + D ++ ++++
Sbjct: 82 QPFEVLIIASDDGFKAVVGDAQYHHFRH 109
>d1hlca_ b.29.1.3 (A:) S-lac lectin, L-14-II {Human (Homo sapiens)
[TaxId: 9606]}
Length = 129
Score = 108 bits (272), Expect = 8e-29
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 5/107 (4%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
F +NL G D + LHFNPRF + V NS WG+E++ + F G
Sbjct: 27 GFVINL---GQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQREDH--LCFSPGSEVKF 81
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTK 236
+ +F + H +FP R ++ L + ++ + K
Sbjct: 82 TVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNMSSFKLK 128
Score = 75.2 bits (185), Expect = 5e-17
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
F +NL G D + LHFNPRF + V NS WG+E++ + F G
Sbjct: 27 GFVINL---GQGTDKLNLHFNPRFSESTIVCNSLDGSNWGQEQREDH--LCFSPGSEVKF 81
Query: 525 EIFCAPSEFM 534
+ +F
Sbjct: 82 TVTFESDKFK 91
Score = 28.3 bits (63), Expect = 1.3
Identities = 9/43 (20%), Positives = 16/43 (37%), Gaps = 9/43 (20%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFKYKA 306
+ ++G + F INL G ++ H + RF
Sbjct: 14 TLKITGSIADGTDGFVINLGQG-----TDKLNLHFNPRFSEST 51
Score = 27.5 bits (61), Expect = 2.3
Identities = 4/28 (14%), Positives = 9/28 (32%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
+ + D F V + D + +
Sbjct: 77 SEVKFTVTFESDKFKVKLPDGHELTFPN 104
>d1lcla_ b.29.1.3 (A:) Charcot-Leyden crystal (CLC) protein {Human
(Homo sapiens) [TaxId: 9606]}
Length = 141
Score = 103 bits (258), Expect = 7e-27
Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 3/105 (2%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 189
V+ ++ DI HF F V NS W ++ + + PF+ G+ F L
Sbjct: 34 YLQVDFHTEMKEESDIVFHFQVCFG-RRVVMNSREYGAWKQQVE--SKNMPFQDGQEFEL 90
Query: 190 EIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQ 234
I P ++ VNG +F +R + +Q+ + + K
Sbjct: 91 SISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFN 135
Score = 69.9 bits (171), Expect = 4e-15
Identities = 17/70 (24%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVL 524
V+ ++ DI HF F V NS W ++ + + PF+ G+ F L
Sbjct: 34 YLQVDFHTEMKEESDIVFHFQVCFG-RRVVMNSREYGAWKQQVE--SKNMPFQDGQEFEL 90
Query: 525 EIFCAPSEFM 534
I P ++
Sbjct: 91 SISVLPDKYQ 100
Score = 27.2 bits (60), Expect = 2.9
Identities = 4/28 (14%), Positives = 13/28 (46%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
+ F + I + D + V ++ + + +
Sbjct: 86 QEFELSISVLPDKYQVMVNGQSSYTFDH 113
Score = 26.4 bits (58), Expect = 4.8
Identities = 6/34 (17%), Positives = 9/34 (26%), Gaps = 2/34 (5%)
Query: 270 DVSGKVPKFFINLQHGKLLWPHPNISFHTSVRFK 303
P ++ +I FH V F
Sbjct: 27 VCFLNEPYLQVDFHTEMK--EESDIVFHFQVCFG 58
>d2nn8a1 b.29.1.3 (A:114-250) Galectin-3 CRD {Human (Homo sapiens)
[TaxId: 9606]}
Length = 137
Score = 101 bits (254), Expect = 3e-26
Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFD---VNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 186
R A++ +D+A HFNPRF+ V N+ + WG EE+ + PF+ G+
Sbjct: 31 RIALDF----QRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSV--FPFESGKP 84
Query: 187 FVLEIFCAPSEFMFAVNGTHFCSFPYRY-PLYTITRLQILPRVDIFKIQ 234
F +++ P F AVN H + +R L I++L I +D+
Sbjct: 85 FKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSAS 133
Score = 71.4 bits (175), Expect = 1e-15
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFD---VNYCVRNSCRNKVWGEEEKAAYVSNPFKLGEN 521
R A++ +D+A HFNPRF+ V N+ + WG EE+ + PF+ G+
Sbjct: 31 RIALDF----QRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGREERQSV--FPFESGKP 84
Query: 522 FVLEIFCAPSEFM 534
F +++ P F
Sbjct: 85 FKIQVLVEPDHFK 97
Score = 29.8 bits (67), Expect = 0.40
Identities = 9/28 (32%), Positives = 19/28 (67%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
K F +++L++ DHF V+++D + Y +
Sbjct: 83 KPFKIQVLVEPDHFKVAVNDAHLLQYNH 110
Score = 29.5 bits (66), Expect = 0.49
Identities = 8/48 (16%), Positives = 17/48 (35%), Gaps = 10/48 (20%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFKYKAESNVT 311
+ + G V ++ Q G +++FH + RF +
Sbjct: 18 LITILGTVKPNANRIALDFQRG------NDVAFHFNPRFNENNRRVIV 59
>d1qmja_ b.29.1.3 (A:) Galectin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 132
Score = 97.6 bits (243), Expect = 7e-25
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 10/108 (9%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 185
F+VN+ G D + LHFNPRF DVN V NS + WGEE++ A PF+ G+
Sbjct: 28 GFSVNV---GKDSSTLMLHFNPRFDCHGDVNTVVCNSKEDGTWGEEDRKAD--FPFQQGD 82
Query: 186 NFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKI 233
+ I +E V F FP R + I L + + I
Sbjct: 83 KVEICISFDAAEVKVKVPEVEF-EFPNRLGMEKIQYLAVEGDFKVKAI 129
Score = 71.4 bits (175), Expect = 1e-15
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
F+VN+ G D + LHFNPRF DVN V NS + WGEE++ A PF+ G+
Sbjct: 28 GFSVNV---GKDSSTLMLHFNPRFDCHGDVNTVVCNSKEDGTWGEEDRKAD--FPFQQGD 82
Query: 521 NFVLEIFCAPSEFM 534
+ I +E
Sbjct: 83 KVEICISFDAAEVK 96
Score = 30.6 bits (69), Expect = 0.18
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 9/47 (19%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFKYKAESNV 310
V V GK+ F +N+ + H + RF + N
Sbjct: 15 CVKVKGKILSDAKGFSVNVGKD-----SSTLMLHFNPRFDCHGDVNT 56
>d1w6na_ b.29.1.3 (A:) Galectin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 134
Score = 96.5 bits (240), Expect = 2e-24
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 9/108 (8%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 185
F +NL G D +++ LHFNPRF D N V NS + WG E++ A PF+ G
Sbjct: 29 SFVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAV--FPFQPGS 83
Query: 186 NFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKI 233
+ I + + + FP R L I + I +
Sbjct: 84 VAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCV 131
Score = 63.4 bits (154), Expect = 8e-13
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
F +NL G D +++ LHFNPRF D N V NS + WG E++ A PF+ G
Sbjct: 29 SFVLNL---GKDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAV--FPFQPGS 83
Query: 521 NFVLEIFCAPSEF 533
+ I +
Sbjct: 84 VAEVCITFDQANL 96
Score = 29.5 bits (66), Expect = 0.54
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 9/47 (19%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFKYKAESNV 310
+ V G+V F +NL N+ H + RF ++N
Sbjct: 16 CLRVRGEVAPDAKSFVLNLGKD-----SNNLCLHFNPRFNAHGDANT 57
Score = 27.6 bits (61), Expect = 2.1
Identities = 3/28 (10%), Positives = 9/28 (32%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
+ I + + +V + D +
Sbjct: 83 SVAEVCITFDQANLTVKLPDGYEFKFPN 110
>d1a78a_ b.29.1.3 (A:) Galectin-1 {Toad (Bufo arenarum) [TaxId:
38577]}
Length = 134
Score = 96.5 bits (240), Expect = 2e-24
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 185
FAVNL G D + LHFN RF DVN V NS WG E++ PF+ G
Sbjct: 30 GFAVNL---GEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREEV--FPFQQGA 84
Query: 186 NFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQI 224
++ + + + SFP R L +I L +
Sbjct: 85 EVMVCFEYQTQKIIIKFSSGDQFSFPVRKVLPSIPFLSL 123
Score = 66.4 bits (162), Expect = 7e-14
Identities = 25/74 (33%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
FAVNL G D + LHFN RF DVN V NS WG E++ PF+ G
Sbjct: 30 GFAVNL---GEDASNFLLHFNARFDLHGDVNKIVCNSKEADAWGSEQREEV--FPFQQGA 84
Query: 521 NFVLEIFCAPSEFM 534
++ + +
Sbjct: 85 EVMVCFEYQTQKII 98
Score = 29.9 bits (67), Expect = 0.40
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 9/47 (19%)
Query: 268 KVDVSGKVP----KFFINLQHGKLLWPHPNISFHTSVRFKYKAESNV 310
V++ G +P F +NL N H + RF + N
Sbjct: 17 CVEIKGSIPPDCKGFAVNLGED-----ASNFLLHFNARFDLHGDVNK 58
Score = 28.3 bits (63), Expect = 1.2
Identities = 0/28 (0%), Positives = 6/28 (21%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
++ + + ++
Sbjct: 84 AEVMVCFEYQTQKIIIKFSSGDQFSFPV 111
>d1is3a_ b.29.1.3 (A:) Congerin II {Conger eel (Conger myriaster)
[TaxId: 7943]}
Length = 134
Score = 94.6 bits (235), Expect = 1e-23
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 10/110 (9%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDV----NYCVRNSC-RNKVWGEEEKAAYVSNPFKLG 184
RF++N+ G D IA+H + RF N V NS N W +EE++ PF G
Sbjct: 28 RFSINV---GESTDSIAMHMDHRFSYGADQNVLVLNSLVHNVGWQQEERSKK--FPFTKG 82
Query: 185 ENFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQ 234
++F I F ++ FP R + + + ++
Sbjct: 83 DHFQTTITFDTHTFYIQLSNGETVEFPNRNKDAAFNLIYLAGDARLTFVR 132
Score = 61.8 bits (150), Expect = 3e-12
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 10/75 (13%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRFDV----NYCVRNSC-RNKVWGEEEKAAYVSNPFKLG 519
RF++N+ G D IA+H + RF N V NS N W +EE++ PF G
Sbjct: 28 RFSINV---GESTDSIAMHMDHRFSYGADQNVLVLNSLVHNVGWQQEERSKK--FPFTKG 82
Query: 520 ENFVLEIFCAPSEFM 534
++F I F
Sbjct: 83 DHFQTTITFDTHTFY 97
Score = 28.3 bits (63), Expect = 1.3
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 9/47 (19%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFKYKAESNV 310
+ V G V F IN+ +I+ H RF Y A+ NV
Sbjct: 15 YLTVGGVVNSNATRFSINVGEST-----DSIAMHMDHRFSYGADQNV 56
Score = 26.8 bits (59), Expect = 3.8
Identities = 3/28 (10%), Positives = 9/28 (32%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
F I F + + + + + +
Sbjct: 83 DHFQTTITFDTHTFYIQLSNGETVEFPN 110
>d1ulea_ b.29.1.3 (A:) Galectin-2 {Inky cap fungus (Coprinopsis
cinerea) [TaxId: 5346]}
Length = 150
Score = 94.6 bits (235), Expect = 2e-23
Identities = 20/117 (17%), Positives = 33/117 (28%), Gaps = 9/117 (7%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRFDVNYCVRNS-CRNKVWGEEEKAAYVSNPFKLGENFV 188
N ++I LH + R N V NS +N WG EE+ Y N
Sbjct: 36 TTVFNF---LSAGENILLHISIRPGENVIVFNSRLKNGAWGPEERIPY--AEKFRPPNPS 90
Query: 189 LEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIF--KIQTKLLHSYPA 243
+ + F + + R + +F + + P
Sbjct: 91 ITVIDHGDRFQIRFDYGTSIYYNKRIKE-NAAAIAYNAENSLFSSPVTVDVHGLLPP 146
Score = 70.3 bits (172), Expect = 5e-15
Identities = 19/85 (22%), Positives = 28/85 (32%), Gaps = 11/85 (12%)
Query: 450 RGVSINTNDLSALVFRFAVNLVISGHDDDDIALHFNPRFDVNYCVRNS-CRNKVWGEEEK 508
R + N+ N ++I LH + R N V NS +N WG EE+
Sbjct: 26 RSSAFNSK-----GGTTVFNF---LSAGENILLHISIRPGENVIVFNSRLKNGAWGPEER 77
Query: 509 AAYVSNPFKLGENFVLEIFCAPSEF 533
Y N + + F
Sbjct: 78 IPY--AEKFRPPNPSITVIDHGDRF 100
Score = 29.1 bits (65), Expect = 0.85
Identities = 5/28 (17%), Positives = 10/28 (35%)
Query: 421 KSFVMRILLKEDHFSVSIDDEKFINYKY 448
+ + ++ D F + D I Y
Sbjct: 87 PNPSITVIDHGDRFQIRFDYGTSIYYNK 114
>d1c1la_ b.29.1.3 (A:) Congerin I {Conger eel (Conger myriaster)
[TaxId: 7943]}
Length = 135
Score = 92.6 bits (230), Expect = 5e-23
Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 130 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 185
RF+VN+ G + ++LH + RF D N V NS G E + + G+
Sbjct: 28 RFSVNV---GESMNSLSLHLDHRFNYGADQNTIVMNSTLKGDNGWETEQRSTNFTLSAGQ 84
Query: 186 NFVLEIFCAPSEFMFAVNGTHFCSFPYRYPLYTITRLQILPRVDIFKIQTK 236
F + + ++F + FP RY + L + + ++ +
Sbjct: 85 YFEITLSYDINKFYIDILDGPNLEFPNRYSKEFLPFLSLAGDARLTLVKLE 135
Score = 62.2 bits (151), Expect = 2e-12
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 465 RFAVNLVISGHDDDDIALHFNPRF----DVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGE 520
RF+VN+ G + ++LH + RF D N V NS G E + + G+
Sbjct: 28 RFSVNV---GESMNSLSLHLDHRFNYGADQNTIVMNSTLKGDNGWETEQRSTNFTLSAGQ 84
Query: 521 NFVLEIFCAPSEFM 534
F + + ++F
Sbjct: 85 YFEITLSYDINKFY 98
Score = 29.1 bits (65), Expect = 0.68
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 9/47 (19%)
Query: 268 KVDVSGKVPK----FFINLQHGKLLWPHPNISFHTSVRFKYKAESNV 310
+ V G + F +N+ ++S H RF Y A+ N
Sbjct: 15 FLTVGGFINNSPQRFSVNVGES-----MNSLSLHLDHRFNYGADQNT 56
>d2pnga1 a.28.1.1 (A:1-76) Type I fatty acid synthase ACP domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 76
Score = 45.2 bits (107), Expect = 4e-07
Identities = 19/65 (29%), Positives = 42/65 (64%)
Query: 352 TVQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKFN 411
+ K + ILGI+++ I+ ++L+DLGLDSLM +V+ +L+ + ++ L ++++L
Sbjct: 8 DLVKAVAHILGIRDLAGINLDSSLADLGLDSLMGVEVRQILEREHDLVLPIREVRQLTLR 67
Query: 412 AVESL 416
++ +
Sbjct: 68 KLQEM 72
>d1f80d_ a.28.1.1 (D:) Acyl carrier protein {Bacillus subtilis
[TaxId: 1423]}
Length = 74
Score = 37.1 bits (86), Expect = 3e-04
Identities = 14/58 (24%), Positives = 31/58 (53%)
Query: 352 TVQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELK 409
V K+I D LG+ +++ DLG D L ++ L+ +F++ +++E +++
Sbjct: 7 RVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIA 64
>d1dv5a_ a.28.1.3 (A:) apo-D-alanyl carrier protein {Lactobacillus
casei [TaxId: 1582]}
Length = 80
Score = 36.0 bits (83), Expect = 8e-04
Identities = 11/65 (16%), Positives = 25/65 (38%)
Query: 352 TVQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKFN 411
V ++ D+ G ++ D LDS+ + LQS+F + + +++
Sbjct: 8 GVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWD 67
Query: 412 AVESL 416
+
Sbjct: 68 TPNKI 72
>d1klpa_ a.28.1.1 (A:) Acyl carrier protein {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 115
Score = 35.2 bits (80), Expect = 0.003
Identities = 11/59 (18%), Positives = 30/59 (50%)
Query: 352 TVQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKF 410
+ ++I ++ GI+ + + + DL +DSL ++ + K+ + + +E + L+
Sbjct: 11 GIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRT 69
>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli
[TaxId: 562]}
Length = 77
Score = 33.6 bits (77), Expect = 0.007
Identities = 15/57 (26%), Positives = 36/57 (63%)
Query: 353 VQKVIGDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELK 409
V+K+IG+ LG++ ++++ + DLG DSL ++ L+ +F+ + +E+ +++
Sbjct: 7 VKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKIT 63
>d1or5a_ a.28.1.1 (A:) Frenolicin polyketide synthase acyl carrier
protein, Fren ACP {Streptomyces roseofulvus [TaxId:
33902]}
Length = 82
Score = 29.5 bits (66), Expect = 0.18
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 353 VQKVIGDILGIQNITSISDS--ATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELK 409
++K++ + G + ++ DLG DSL + VLQ ++ I+LT+E + L
Sbjct: 8 LKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLG 66
>d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus
subtilis [TaxId: 1423]}
Length = 372
Score = 30.8 bits (69), Expect = 0.37
Identities = 36/294 (12%), Positives = 83/294 (28%), Gaps = 40/294 (13%)
Query: 146 ALHFNPRFDVNYCVRNSCRNKVWGEEEKAAYVSNPFKLGENFVLEIFCA--------PSE 197
LH++ + Y + S R + E+ ++ + G+ + +E
Sbjct: 86 ELHWHKEAEWAYMIYGSARVTIVDEKGRS--FIDDVGEGDLWYFPSGLPHSIQALEEGAE 143
Query: 198 FMFAVNGTHFCSFPYRYPLYTITRLQI--------LPRVDIFKIQTK----LLHSYPATT 245
F+ + F + + + +I + K + P +
Sbjct: 144 FLLVFDDGSFSENSTFQLTDWLAHTPKEVIAANFGVTKEEISNLPGKEKYIFENQLPGSL 203
Query: 246 QDDLVAQLKDQPLYHHHVLGYEKVDVSGKVPKFFINLQHGKLLWPHP-NISFHTSVRFKY 304
+DD+V + Y E+ + + K +I + I+
Sbjct: 204 KDDIVEGPNGEVPYPFTYRLLEQEPIESEGGKVYIADSTN---FKVSKTIASA---LVTV 257
Query: 305 KAESNVTSGDVKQENVTVQKVIGDILAPAFCKRYKNVT----SGDV---KQENVTVQKVI 357
+ + + + G F T +GDV + I
Sbjct: 258 EPGAMRELHWHPNTHEWQYYISGKARMTVFASDGHARTFNYQAGDVGYVPFAMGHYVENI 317
Query: 358 GDILGIQNITSISDSATLSDLGLDSLMAADVKNVLQSKFNISLTNEQIKELKFN 411
GD + I +D+ L+ +A + +Q+ ++ + L
Sbjct: 318 GDEPLV--FLEIFKDDHYADVSLNQWLAMLPETFVQAHLDLG--KDFTDVLSKE 367
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 27.3 bits (60), Expect = 4.8
Identities = 32/163 (19%), Positives = 60/163 (36%), Gaps = 11/163 (6%)
Query: 292 PNISFHTSVRFKYKAESNVTSGDVKQENVTVQKVIGDILAPAFCKRYKNVTSGDVKQENV 351
S+R +++TS + T + + IL + + YK N
Sbjct: 32 GTPIQSISLRTNSPQPTSLTSDNDTSSVTTAK--LQSILFSNYMEEYKVDFKRSTAIYNP 89
Query: 352 T--VQKVIGDILGIQNITSISDSATLSDLGLDSLMAA-DVKNVLQSKFNISLTNEQIKEL 408
+ K+I + L + L L A+ D + I+L N+ I+E+
Sbjct: 90 MSEIGKLIE--YSCLVFLPSPYAEQLKETILPDLNASFDNSDTKGFVNAINLYNKMIREI 147
Query: 409 K----FNAVESLLKVPKSFVMRILLKEDHFSVSIDDEKFINYK 447
+ +E++ K+P+SF+ L S+ K +YK
Sbjct: 148 PRQRIIDHLETIDKIPRSFIHDFLHIVYTRSIHPQANKLKHYK 190
>d1ogmx2 b.80.1.10 (X:202-574) Dextranase, catalytic domain
{Penicillium minioluteum [TaxId: 28574]}
Length = 373
Score = 27.3 bits (60), Expect = 5.4
Identities = 14/105 (13%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Query: 301 RFKYKAESNVTSGDVKQENVTVQKVIGDILAPAFCKRYKNVTSGDVKQENVTVQKVIGDI 360
+ + S + NV + + + + YKN +V + IG
Sbjct: 262 YASGMSPDSRKSISMTVSNVVCEGLCPSLFRITPLQNYKNFVVKNVAFPDGLQTNSIGTG 321
Query: 361 LGIQNIT-SISDSATLSDLGLD--SLMAADVKNVLQSKFNISLTN 402
I ++ +S + + + + +FNI +
Sbjct: 322 ESIIPAASGLTMGLAISAWTIGGQKVTMENFQANSLGQFNIDGSY 366
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.408
Gapped
Lambda K H
0.267 0.0506 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,044,940
Number of extensions: 97066
Number of successful extensions: 323
Number of sequences better than 10.0: 1
Number of HSP's gapped: 289
Number of HSP's successfully gapped: 55
Length of query: 539
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 449
Effective length of database: 1,171,896
Effective search space: 526181304
Effective search space used: 526181304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.5 bits)