Query psy11975
Match_columns 786
No_of_seqs 388 out of 1667
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 15:25:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11975.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11975hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3si9_A DHDPS, dihydrodipicolin 100.0 6.8E-52 2.3E-56 441.8 27.4 251 456-743 58-314 (315)
2 3flu_A DHDPS, dihydrodipicolin 100.0 9.4E-52 3.2E-56 436.7 27.6 250 456-742 43-297 (297)
3 2rfg_A Dihydrodipicolinate syn 100.0 7.6E-52 2.6E-56 437.6 26.7 252 456-744 36-292 (297)
4 3qze_A DHDPS, dihydrodipicolin 100.0 1.1E-51 3.9E-56 439.7 28.0 250 456-742 59-313 (314)
5 3s5o_A 4-hydroxy-2-oxoglutarat 100.0 1.5E-51 5E-56 437.3 28.4 253 456-742 50-307 (307)
6 3tak_A DHDPS, dihydrodipicolin 100.0 9E-52 3.1E-56 435.4 26.0 250 456-742 37-291 (291)
7 2ehh_A DHDPS, dihydrodipicolin 100.0 1.9E-51 6.7E-56 433.4 28.3 251 456-743 36-292 (294)
8 3eb2_A Putative dihydrodipicol 100.0 9.5E-52 3.2E-56 437.5 25.3 243 461-740 48-292 (300)
9 3na8_A Putative dihydrodipicol 100.0 1.3E-51 4.6E-56 439.4 26.4 249 456-741 60-314 (315)
10 3m5v_A DHDPS, dihydrodipicolin 100.0 2E-51 6.7E-56 435.0 26.9 249 456-742 43-299 (301)
11 3l21_A DHDPS, dihydrodipicolin 100.0 1.5E-51 5E-56 437.0 25.5 249 456-743 51-304 (304)
12 3a5f_A Dihydrodipicolinate syn 100.0 1.5E-51 5E-56 433.8 25.0 250 456-742 37-291 (291)
13 1xky_A Dihydrodipicolinate syn 100.0 3.4E-51 1.2E-55 433.4 27.3 248 456-740 48-300 (301)
14 2ojp_A DHDPS, dihydrodipicolin 100.0 1.8E-51 6E-56 433.4 24.8 250 456-742 37-292 (292)
15 3cpr_A Dihydrodipicolinate syn 100.0 5.5E-51 1.9E-55 432.3 28.6 248 456-742 52-304 (304)
16 2vc6_A MOSA, dihydrodipicolina 100.0 4.4E-51 1.5E-55 430.4 27.2 250 456-742 36-291 (292)
17 2yxg_A DHDPS, dihydrodipicolin 100.0 5.1E-51 1.7E-55 429.3 27.6 248 456-742 36-289 (289)
18 1o5k_A DHDPS, dihydrodipicolin 100.0 3.3E-51 1.1E-55 434.4 26.3 250 456-742 48-306 (306)
19 2r8w_A AGR_C_1641P; APC7498, d 100.0 5.2E-51 1.8E-55 437.8 26.5 253 456-745 70-331 (332)
20 3h5d_A DHDPS, dihydrodipicolin 100.0 7.1E-51 2.4E-55 433.1 27.0 251 456-743 43-298 (311)
21 1f6k_A N-acetylneuraminate lya 100.0 1.1E-50 3.7E-55 427.6 25.8 246 456-739 40-291 (293)
22 2wkj_A N-acetylneuraminate lya 100.0 1.7E-50 5.8E-55 428.4 25.4 246 456-739 47-299 (303)
23 2v9d_A YAGE; dihydrodipicolini 100.0 2.5E-50 8.6E-55 434.3 26.6 251 456-743 67-328 (343)
24 3daq_A DHDPS, dihydrodipicolin 100.0 1.3E-50 4.5E-55 427.0 23.9 246 456-741 38-290 (292)
25 2pcq_A Putative dihydrodipicol 100.0 2.4E-49 8.3E-54 415.7 24.8 242 456-742 33-282 (283)
26 3qfe_A Putative dihydrodipicol 100.0 6E-49 2E-53 419.5 24.1 251 456-743 47-314 (318)
27 3d0c_A Dihydrodipicolinate syn 100.0 2.4E-48 8.1E-53 414.1 25.4 246 456-743 48-304 (314)
28 2r91_A 2-keto-3-deoxy-(6-phosp 100.0 5.3E-48 1.8E-52 405.8 25.9 240 456-739 34-280 (286)
29 1w3i_A EDA, 2-keto-3-deoxy glu 100.0 8.9E-48 3E-52 405.7 26.5 241 456-740 35-282 (293)
30 3fkr_A L-2-keto-3-deoxyarabona 100.0 1.3E-47 4.5E-52 407.5 26.6 247 456-742 44-303 (309)
31 3e96_A Dihydrodipicolinate syn 100.0 1.5E-47 5.2E-52 408.0 26.4 250 456-744 48-305 (316)
32 3dz1_A Dihydrodipicolinate syn 100.0 2E-47 6.9E-52 406.5 25.7 247 456-743 44-306 (313)
33 2hmc_A AGR_L_411P, dihydrodipi 100.0 4.6E-47 1.6E-51 409.3 26.3 242 456-741 62-324 (344)
34 2nuw_A 2-keto-3-deoxygluconate 100.0 6E-47 2.1E-51 398.5 26.3 239 456-740 35-280 (288)
35 3b4u_A Dihydrodipicolinate syn 100.0 2.3E-46 7.8E-51 395.1 20.1 238 456-740 39-289 (294)
36 4dpp_A DHDPS 2, dihydrodipicol 100.0 3.4E-45 1.2E-49 396.7 22.5 240 456-743 95-339 (360)
37 2gfu_A DNA mismatch repair pro 99.7 6.2E-18 2.1E-22 160.3 0.3 100 354-477 20-128 (134)
38 3llr_A DNA (cytosine-5)-methyl 99.7 3.8E-17 1.3E-21 158.7 5.1 67 352-420 12-84 (154)
39 4fu6_A PC4 and SFRS1-interacti 99.6 3E-17 1E-21 158.7 3.0 65 353-419 19-88 (153)
40 3qby_A Hepatoma-derived growth 99.6 4.3E-17 1.5E-21 146.3 3.8 63 355-419 4-71 (94)
41 1ri0_A Hepatoma-derived growth 99.6 7.5E-17 2.6E-21 148.6 1.8 65 352-418 15-84 (110)
42 1khc_A DNA cytosine-5 methyltr 99.6 2.5E-16 8.7E-21 151.9 2.9 66 352-419 7-78 (147)
43 2daq_A WHSC1L1 protein, isofor 99.6 2.9E-16 9.9E-21 143.9 2.8 64 352-417 4-77 (110)
44 2l89_A PWWP domain-containing 99.6 4.4E-16 1.5E-20 142.9 2.3 58 354-413 3-70 (108)
45 1h3z_A Hypothetical 62.8 kDa p 99.5 2.2E-15 7.5E-20 138.1 3.1 58 354-413 4-73 (109)
46 3l42_A Peregrin; transcription 99.5 1.8E-14 6.2E-19 136.1 6.3 61 355-416 4-94 (130)
47 3pfs_A Bromodomain and PHD fin 99.5 2.7E-14 9.1E-19 138.9 6.1 61 354-415 34-124 (158)
48 4dnh_A Uncharacterized protein 97.3 0.0054 1.9E-07 65.9 16.2 235 515-753 113-379 (396)
49 2qjg_A Putative aldolase MJ040 96.9 0.0019 6.5E-08 66.3 8.3 136 511-652 76-239 (273)
50 1jub_A Dihydroorotate dehydrog 96.3 0.065 2.2E-06 56.1 15.2 144 514-663 93-286 (311)
51 3pmi_A PWWP domain-containing 95.6 0.0071 2.4E-07 57.0 3.6 57 355-411 3-62 (134)
52 2ekc_A AQ_1548, tryptophan syn 95.5 0.2 6.7E-06 51.8 14.6 63 520-582 24-105 (262)
53 4ef8_A Dihydroorotate dehydrog 95.3 0.6 2E-05 50.7 18.1 142 514-662 126-320 (354)
54 2e6f_A Dihydroorotate dehydrog 95.2 0.21 7E-06 52.3 13.7 134 514-654 93-277 (314)
55 3glc_A Aldolase LSRF; TIM barr 94.9 0.12 4.1E-06 54.9 10.8 160 514-680 105-292 (295)
56 3oix_A Putative dihydroorotate 94.8 1 3.6E-05 48.6 17.9 133 514-652 128-306 (345)
57 1w8s_A FBP aldolase, fructose- 94.0 0.67 2.3E-05 48.0 13.8 119 528-652 93-233 (263)
58 3khj_A Inosine-5-monophosphate 93.6 0.2 6.9E-06 54.4 9.5 143 466-655 77-241 (361)
59 3nvt_A 3-deoxy-D-arabino-heptu 93.3 0.69 2.3E-05 50.9 13.1 93 513-609 141-257 (385)
60 3iv3_A Tagatose 1,6-diphosphat 93.2 0.41 1.4E-05 51.7 11.0 117 533-652 116-282 (332)
61 1rd5_A Tryptophan synthase alp 93.2 0.82 2.8E-05 46.6 12.8 59 520-578 25-99 (262)
62 1qop_A Tryptophan synthase alp 93.0 2 6.8E-05 44.3 15.4 61 521-582 25-105 (268)
63 1ep3_A Dihydroorotate dehydrog 92.9 0.74 2.5E-05 47.6 12.1 70 514-583 98-174 (311)
64 3tjx_A Dihydroorotate dehydrog 92.4 7.4 0.00025 41.5 19.4 72 513-584 125-204 (354)
65 3eoo_A Methylisocitrate lyase; 92.4 0.51 1.8E-05 50.2 10.2 140 515-666 23-206 (298)
66 2hjp_A Phosphonopyruvate hydro 92.1 0.79 2.7E-05 48.6 11.1 142 515-667 16-203 (290)
67 3ih1_A Methylisocitrate lyase; 91.6 0.56 1.9E-05 50.1 9.3 136 515-666 30-210 (305)
68 3tsm_A IGPS, indole-3-glycerol 91.5 2.1 7.1E-05 45.0 13.4 137 514-669 120-268 (272)
69 1eep_A Inosine 5'-monophosphat 91.3 0.64 2.2E-05 50.7 9.7 131 511-655 138-290 (404)
70 1s2w_A Phosphoenolpyruvate pho 91.3 0.89 3E-05 48.3 10.5 144 514-667 19-207 (295)
71 3qii_A PHD finger protein 20; 90.9 0.12 4.3E-06 45.7 2.9 56 354-413 19-74 (85)
72 1to3_A Putative aldolase YIHT; 90.8 0.94 3.2E-05 48.0 10.1 140 511-652 82-256 (304)
73 4fo4_A Inosine 5'-monophosphat 90.3 0.86 2.9E-05 49.7 9.5 145 466-655 78-245 (366)
74 1f76_A Dihydroorotate dehydrog 90.3 1.7 6E-05 45.8 11.7 144 514-664 133-334 (336)
75 4avf_A Inosine-5'-monophosphat 89.5 0.74 2.5E-05 51.8 8.5 131 511-656 214-367 (490)
76 2v82_A 2-dehydro-3-deoxy-6-pho 89.1 3.5 0.00012 40.3 12.1 57 514-578 6-62 (212)
77 3p8d_A Medulloblastoma antigen 89.1 0.22 7.6E-06 42.2 2.9 55 355-413 5-59 (67)
78 4fxs_A Inosine-5'-monophosphat 89.1 0.66 2.3E-05 52.3 7.7 131 511-656 216-369 (496)
79 3b8i_A PA4872 oxaloacetate dec 88.9 1.3 4.4E-05 46.9 9.3 139 516-666 23-203 (287)
80 3zwt_A Dihydroorotate dehydrog 88.9 2 7E-05 46.7 11.1 146 514-666 146-345 (367)
81 1zco_A 2-dehydro-3-deoxyphosph 88.9 4.3 0.00015 42.2 13.1 61 515-578 24-92 (262)
82 1vs1_A 3-deoxy-7-phosphoheptul 88.7 4.3 0.00015 42.7 13.0 64 513-578 37-107 (276)
83 1xg4_A Probable methylisocitra 88.5 2.3 8E-05 45.1 11.0 142 515-666 18-202 (295)
84 2ze3_A DFA0005; organic waste 88.1 2.7 9.1E-05 44.2 11.0 108 517-634 19-154 (275)
85 1wv2_A Thiazole moeity, thiazo 88.1 4.5 0.00015 42.5 12.5 144 514-670 73-240 (265)
86 3ih1_A Methylisocitrate lyase; 87.7 2.1 7.1E-05 45.8 9.9 72 514-597 159-235 (305)
87 4a4f_A SurviVal of motor neuro 87.5 0.33 1.1E-05 40.1 3.0 58 353-413 5-64 (64)
88 1o66_A 3-methyl-2-oxobutanoate 87.1 1.5 5.1E-05 46.3 8.3 96 516-619 19-129 (275)
89 2qiw_A PEP phosphonomutase; st 86.2 2.9 9.9E-05 43.4 9.9 84 517-609 23-113 (255)
90 3sr7_A Isopentenyl-diphosphate 85.7 7.9 0.00027 42.2 13.4 131 514-652 144-309 (365)
91 1vr6_A Phospho-2-dehydro-3-deo 85.7 6.8 0.00023 42.6 12.8 64 513-578 105-175 (350)
92 3tsm_A IGPS, indole-3-glycerol 85.5 3.6 0.00012 43.1 10.3 121 513-645 57-191 (272)
93 1m3u_A 3-methyl-2-oxobutanoate 85.5 2 7E-05 45.0 8.3 95 516-619 19-128 (264)
94 3uau_A JLPA, surface-exposed l 85.4 0.19 6.5E-06 52.8 0.5 31 204-234 3-33 (379)
95 3nav_A Tryptophan synthase alp 85.3 5.3 0.00018 41.8 11.4 123 514-652 97-239 (271)
96 3ffs_A Inosine-5-monophosphate 84.9 2.2 7.4E-05 47.2 8.6 130 512-657 132-282 (400)
97 2qkf_A 3-deoxy-D-manno-octulos 84.8 2 6.8E-05 45.2 7.9 94 514-609 15-137 (280)
98 3lye_A Oxaloacetate acetyl hyd 84.7 3 0.0001 44.5 9.4 74 514-597 162-239 (307)
99 1zlp_A PSR132, petal death pro 84.7 2.9 9.9E-05 44.9 9.2 74 513-597 172-249 (318)
100 3lg3_A Isocitrate lyase; conse 84.6 3 0.0001 46.6 9.5 67 524-596 268-336 (435)
101 4e38_A Keto-hydroxyglutarate-a 84.1 6.5 0.00022 40.3 11.2 133 517-682 86-227 (232)
102 3vnd_A TSA, tryptophan synthas 84.1 7.1 0.00024 40.7 11.7 123 514-652 95-237 (267)
103 3b0p_A TRNA-dihydrouridine syn 83.8 8 0.00027 41.5 12.3 149 515-667 58-243 (350)
104 3ngj_A Deoxyribose-phosphate a 83.8 1.7 5.6E-05 45.1 6.6 125 518-650 84-231 (239)
105 3tha_A Tryptophan synthase alp 83.7 6 0.00021 41.1 10.8 126 514-652 88-229 (252)
106 1gte_A Dihydropyrimidine dehyd 83.6 15 0.0005 44.9 15.8 136 514-655 634-821 (1025)
107 1zlp_A PSR132, petal death pro 83.6 7.2 0.00025 41.9 11.7 140 515-666 40-224 (318)
108 3i4e_A Isocitrate lyase; struc 83.5 3.2 0.00011 46.5 9.1 66 524-595 268-335 (439)
109 3fa4_A 2,3-dimethylmalate lyas 83.5 3.4 0.00012 44.1 9.0 74 515-597 155-231 (302)
110 1vrd_A Inosine-5'-monophosphat 82.9 2.1 7.1E-05 47.8 7.5 128 512-654 223-373 (494)
111 1mhn_A SurviVal motor neuron p 82.8 0.76 2.6E-05 37.3 3.0 55 355-411 2-57 (59)
112 3fok_A Uncharacterized protein 82.5 5.3 0.00018 42.8 10.1 118 533-655 134-278 (307)
113 3s6w_A Tudor domain-containing 82.4 0.73 2.5E-05 36.6 2.6 51 357-410 2-54 (54)
114 3usb_A Inosine-5'-monophosphat 81.8 4 0.00014 46.2 9.3 131 511-656 241-394 (511)
115 3hgj_A Chromate reductase; TIM 81.7 3.5 0.00012 44.2 8.4 104 510-619 215-333 (349)
116 1oy0_A Ketopantoate hydroxymet 81.6 4.3 0.00015 43.0 8.9 97 516-619 36-147 (281)
117 1o60_A 2-dehydro-3-deoxyphosph 81.5 1.9 6.6E-05 45.6 6.3 94 514-609 18-140 (292)
118 3cyv_A URO-D, UPD, uroporphyri 81.3 21 0.00071 37.8 14.3 129 526-667 186-346 (354)
119 1xm3_A Thiazole biosynthesis p 80.7 7.8 0.00027 39.9 10.4 129 514-652 65-209 (264)
120 3igs_A N-acetylmannosamine-6-p 80.7 18 0.0006 36.7 12.8 112 530-658 91-218 (232)
121 3b8i_A PA4872 oxaloacetate dec 80.4 3.8 0.00013 43.3 8.1 101 466-609 132-234 (287)
122 3q58_A N-acetylmannosamine-6-p 79.8 20 0.00069 36.2 12.9 114 530-660 91-220 (229)
123 1p0k_A Isopentenyl-diphosphate 79.6 19 0.00065 38.2 13.3 131 514-654 116-284 (349)
124 2eja_A URO-D, UPD, uroporphyri 79.5 8.9 0.00031 40.3 10.6 129 525-668 177-334 (338)
125 3eoo_A Methylisocitrate lyase; 79.5 4.7 0.00016 42.9 8.4 73 514-597 155-231 (298)
126 1ydx_A Type I restriction enzy 79.4 0.38 1.3E-05 51.3 0.0 14 465-478 161-175 (406)
127 2hjp_A Phosphonopyruvate hydro 79.3 4.4 0.00015 42.9 8.0 81 513-609 148-235 (290)
128 3lab_A Putative KDPG (2-keto-3 79.2 3.5 0.00012 42.1 7.0 134 517-683 65-213 (217)
129 3tla_A MCCF; serine protease, 79.1 0.48 1.7E-05 51.8 0.7 68 512-582 263-335 (371)
130 1i4n_A Indole-3-glycerol phosp 79.0 12 0.00042 38.7 11.2 120 513-645 39-173 (251)
131 1qwg_A PSL synthase;, (2R)-pho 79.0 5 0.00017 41.9 8.1 55 463-548 107-169 (251)
132 3nav_A Tryptophan synthase alp 78.7 10 0.00036 39.6 10.6 111 518-632 25-159 (271)
133 2czd_A Orotidine 5'-phosphate 78.7 6.9 0.00024 38.5 8.9 109 529-652 67-187 (208)
134 3f4w_A Putative hexulose 6 pho 78.7 23 0.0008 34.2 12.6 125 514-652 53-189 (211)
135 2w6r_A Imidazole glycerol phos 78.2 5.6 0.00019 40.1 8.2 132 514-656 74-235 (266)
136 3vav_A 3-methyl-2-oxobutanoate 78.2 11 0.00039 39.6 10.7 95 516-619 31-140 (275)
137 3lye_A Oxaloacetate acetyl hyd 78.0 10 0.00035 40.5 10.4 139 517-667 28-214 (307)
138 4a29_A Engineered retro-aldol 77.9 11 0.00039 39.3 10.5 120 514-652 104-235 (258)
139 3q58_A N-acetylmannosamine-6-p 77.8 18 0.00062 36.6 11.9 115 517-648 20-154 (229)
140 1f8m_A Isocitrate lyase, ICL; 77.6 7.9 0.00027 43.2 9.8 67 524-596 264-332 (429)
141 1ka9_F Imidazole glycerol phos 77.6 6.4 0.00022 39.3 8.4 85 526-619 30-119 (252)
142 1h5y_A HISF; histidine biosynt 77.3 8.6 0.00029 37.7 9.1 130 514-652 77-229 (253)
143 1g5v_A SurviVal motor neuron p 77.1 1.5 5E-05 38.9 3.1 59 354-414 8-67 (88)
144 3i65_A Dihydroorotate dehydrog 76.3 9.2 0.00031 42.5 9.8 143 514-663 181-389 (415)
145 1vhn_A Putative flavin oxidore 76.3 5.7 0.0002 41.8 7.9 148 514-670 58-234 (318)
146 2d9t_A Tudor domain-containing 76.1 1.7 5.9E-05 37.3 3.2 58 354-413 7-65 (78)
147 2qiw_A PEP phosphonomutase; st 76.1 6.1 0.00021 41.0 7.9 64 525-598 166-229 (255)
148 1s2w_A Phosphoenolpyruvate pho 76.0 12 0.0004 39.7 10.2 75 513-597 152-230 (295)
149 4adt_A Pyridoxine biosynthetic 75.7 3.2 0.00011 44.1 5.8 49 531-580 32-85 (297)
150 4h3d_A 3-dehydroquinate dehydr 75.4 21 0.00072 36.8 11.8 105 513-618 18-132 (258)
151 1xg4_A Probable methylisocitra 75.4 6.1 0.00021 41.9 7.8 82 513-609 150-235 (295)
152 3fwy_A Light-independent proto 75.2 0.59 2E-05 49.6 0.0 24 204-234 2-25 (314)
153 3igs_A N-acetylmannosamine-6-p 74.9 24 0.00081 35.7 11.8 116 516-648 19-154 (232)
154 1geq_A Tryptophan synthase alp 74.6 47 0.0016 32.9 13.8 124 515-652 81-222 (248)
155 3kdn_A Rubisco, ribulose bisph 74.3 8.9 0.0003 43.0 9.1 93 511-613 220-329 (444)
156 2equ_A PHD finger protein 20-l 74.2 2.7 9.3E-05 36.1 3.9 56 354-413 7-62 (74)
157 3l5l_A Xenobiotic reductase A; 74.2 4.4 0.00015 43.7 6.5 84 511-600 222-316 (363)
158 1viz_A PCRB protein homolog; s 74.2 2.3 8E-05 43.8 4.2 63 519-586 12-77 (240)
159 3sgz_A Hydroxyacid oxidase 2; 74.2 33 0.0011 37.3 13.3 129 515-653 122-304 (352)
160 2nzl_A Hydroxyacid oxidase 1; 74.1 32 0.0011 37.6 13.4 130 515-653 147-339 (392)
161 1mzh_A Deoxyribose-phosphate a 73.9 15 0.00051 36.9 10.0 116 522-645 65-199 (225)
162 2ldm_A Uncharacterized protein 76.1 0.66 2.3E-05 40.7 0.0 55 355-413 5-59 (81)
163 2ze3_A DFA0005; organic waste 73.8 7.7 0.00026 40.7 8.0 59 525-597 166-224 (275)
164 2zbt_A Pyridoxal biosynthesis 73.5 47 0.0016 34.2 13.9 59 514-579 21-84 (297)
165 2diq_A Tudor and KH domain-con 73.3 4.7 0.00016 36.1 5.5 78 355-445 31-109 (110)
166 3qja_A IGPS, indole-3-glycerol 73.2 12 0.00042 39.0 9.4 120 514-652 113-244 (272)
167 4axs_A Carbamate kinase; oxido 73.2 0.71 2.4E-05 49.8 0.0 17 532-548 236-252 (332)
168 3fa4_A 2,3-dimethylmalate lyas 73.1 16 0.00055 38.9 10.4 138 517-666 21-205 (302)
169 4hg6_A Cellulose synthase subu 73.1 0.71 2.4E-05 54.8 0.0 26 192-218 777-802 (802)
170 1r3s_A URO-D, uroporphyrinogen 72.5 17 0.00058 38.8 10.6 129 526-667 196-358 (367)
171 1o66_A 3-methyl-2-oxobutanoate 72.4 5.7 0.0002 41.9 6.6 64 524-598 158-222 (275)
172 3odm_A Pepcase, PEPC, phosphoe 72.1 0.88 3E-05 52.1 0.4 19 725-743 480-502 (560)
173 2yjp_A Putative ABC transporte 72.0 0.78 2.7E-05 46.1 0.0 11 656-666 248-258 (291)
174 3r12_A Deoxyribose-phosphate a 71.2 8 0.00028 40.5 7.4 123 521-651 105-248 (260)
175 3pnw_C Tudor domain-containing 70.6 2.3 7.7E-05 36.6 2.6 56 355-412 16-72 (77)
176 1wa3_A 2-keto-3-deoxy-6-phosph 70.5 21 0.00071 34.5 9.8 99 532-653 75-181 (205)
177 1tv5_A Dhodehase, dihydroorota 70.2 47 0.0016 37.1 13.7 55 515-570 180-243 (443)
178 3r2g_A Inosine 5'-monophosphat 69.6 51 0.0018 35.8 13.6 117 527-657 99-235 (361)
179 1ub3_A Aldolase protein; schif 69.6 8.6 0.00029 39.0 7.1 121 523-651 67-208 (220)
180 3eol_A Isocitrate lyase; seatt 69.3 7.1 0.00024 43.6 6.8 52 524-581 263-314 (433)
181 1jub_A Dihydroorotate dehydrog 68.8 14 0.00046 38.4 8.6 36 514-549 158-194 (311)
182 2htm_A Thiazole biosynthesis p 68.2 22 0.00076 37.4 9.9 144 514-670 63-231 (268)
183 2zvi_A 2,3-diketo-5-methylthio 67.8 15 0.00053 40.9 9.1 147 511-670 218-400 (425)
184 2rdx_A Mandelate racemase/muco 67.5 34 0.0012 36.6 11.6 100 514-631 189-294 (379)
185 2f5k_A MORF-related gene 15 is 67.3 2.7 9.1E-05 38.3 2.4 59 354-413 20-80 (102)
186 1vli_A Spore coat polysacchari 67.1 34 0.0012 37.7 11.6 108 514-633 28-168 (385)
187 1vc4_A Indole-3-glycerol phosp 66.8 11 0.00038 38.7 7.3 119 514-645 45-176 (254)
188 1jcn_A Inosine monophosphate d 66.0 21 0.0007 40.0 9.9 127 512-655 241-392 (514)
189 3o1n_A 3-dehydroquinate dehydr 66.0 37 0.0013 35.5 11.1 106 513-619 38-153 (276)
190 2wqp_A Polysialic acid capsule 66.0 40 0.0014 36.6 11.7 107 515-633 20-158 (349)
191 1ujp_A Tryptophan synthase alp 65.6 6.9 0.00023 40.8 5.5 64 518-582 21-102 (271)
192 3b9f_I Protein C inhibitor; mi 65.5 1.3 4.4E-05 48.4 0.0 17 204-220 3-19 (395)
193 1z41_A YQJM, probable NADH-dep 65.4 14 0.00047 39.3 8.0 99 514-619 209-322 (338)
194 2qjg_A Putative aldolase MJ040 65.4 6.4 0.00022 40.0 5.2 55 514-570 202-258 (273)
195 2yr1_A 3-dehydroquinate dehydr 65.3 45 0.0015 34.4 11.5 85 512-597 17-105 (257)
196 1oy0_A Ketopantoate hydroxymet 65.1 6.4 0.00022 41.6 5.2 63 525-598 177-240 (281)
197 1zfj_A Inosine monophosphate d 64.9 12 0.00041 41.5 7.6 116 527-654 232-369 (491)
198 3cwo_X Beta/alpha-barrel prote 64.9 34 0.0012 32.5 10.0 143 514-668 55-222 (237)
199 3oa3_A Aldolase; structural ge 64.8 50 0.0017 35.0 11.9 122 522-650 121-265 (288)
200 3qy7_A Tyrosine-protein phosph 64.4 10 0.00035 39.1 6.5 75 522-599 15-93 (262)
201 3gr7_A NADPH dehydrogenase; fl 64.3 13 0.00045 39.7 7.6 100 514-619 209-322 (340)
202 3etc_A AMP-binding protein; ad 63.8 1.5 5.2E-05 49.4 0.2 15 724-738 529-543 (580)
203 3p6l_A Sugar phosphate isomera 63.4 30 0.001 34.1 9.6 76 524-609 88-165 (262)
204 3tqk_A Phospho-2-dehydro-3-deo 63.4 81 0.0028 34.3 13.3 114 512-626 48-205 (346)
205 2nli_A Lactate oxidase; flavoe 63.4 65 0.0022 34.8 12.8 130 515-652 133-315 (368)
206 3vkj_A Isopentenyl-diphosphate 63.3 34 0.0012 37.1 10.7 81 513-600 118-210 (368)
207 2es4_D Lipase chaperone; prote 63.2 1.5 5.2E-05 47.4 0.0 21 723-743 297-317 (332)
208 4exq_A UPD, URO-D, uroporphyri 62.4 25 0.00085 37.9 9.3 96 526-634 196-304 (368)
209 1j93_A UROD, uroporphyrinogen 62.3 18 0.0006 38.3 8.0 129 526-667 192-349 (353)
210 1vyr_A Pentaerythritol tetrani 62.3 11 0.00038 40.7 6.5 85 524-619 248-338 (364)
211 1hg3_A Triosephosphate isomera 62.2 56 0.0019 33.2 11.4 120 516-666 91-221 (225)
212 4hcz_A PHD finger protein 1; p 62.1 4.5 0.00015 33.4 2.6 52 356-410 3-54 (58)
213 1h5y_A HISF; histidine biosynt 62.0 17 0.00057 35.6 7.3 84 527-619 33-121 (253)
214 2inf_A URO-D, UPD, uroporphyri 62.0 46 0.0016 35.3 11.2 127 526-666 192-346 (359)
215 2oar_A Large-conductance mecha 61.9 1.6 5.6E-05 43.2 0.0 12 728-739 136-147 (174)
216 3qja_A IGPS, indole-3-glycerol 61.8 53 0.0018 34.1 11.4 107 527-645 72-184 (272)
217 2ztj_A Homocitrate synthase; ( 61.5 1.8E+02 0.0062 31.4 20.0 125 533-660 80-238 (382)
218 1ps9_A 2,4-dienoyl-COA reducta 61.5 14 0.00048 42.5 7.6 90 510-606 204-309 (671)
219 3ajx_A 3-hexulose-6-phosphate 61.4 56 0.0019 31.4 10.9 123 514-653 53-189 (207)
220 2yln_A Putative ABC transporte 61.2 1.7 5.9E-05 43.5 0.0 6 625-630 225-230 (283)
221 1gox_A (S)-2-hydroxy-acid oxid 61.2 1E+02 0.0035 33.1 13.9 129 516-653 124-312 (370)
222 3aam_A Endonuclease IV, endoiv 61.0 24 0.00081 35.0 8.3 78 526-609 87-170 (270)
223 2pgw_A Muconate cycloisomerase 60.9 44 0.0015 35.8 11.0 104 514-632 190-299 (384)
224 2qr6_A IMP dehydrogenase/GMP r 60.9 30 0.001 37.4 9.6 128 514-656 155-312 (393)
225 4a29_A Engineered retro-aldol 60.7 9.9 0.00034 39.8 5.6 104 529-645 66-175 (258)
226 1ypf_A GMP reductase; GUAC, pu 60.6 74 0.0025 33.7 12.5 124 515-655 95-244 (336)
227 1i4n_A Indole-3-glycerol phosp 60.2 42 0.0014 34.7 10.2 121 514-654 101-234 (251)
228 2r14_A Morphinone reductase; H 59.1 3.8 0.00013 44.6 2.3 87 524-619 252-343 (377)
229 4amu_A Ornithine carbamoyltran 58.9 2.1 7.2E-05 46.8 0.2 62 517-582 184-245 (365)
230 1tv5_A Dhodehase, dihydroorota 58.3 35 0.0012 38.1 9.8 39 514-552 296-336 (443)
231 3vk5_A MOEO5; TIM barrel, tran 58.1 18 0.0006 38.5 7.0 54 523-581 49-104 (286)
232 2lrq_A Protein MRG15, NUA4 com 62.7 2.1 7.2E-05 37.7 0.0 58 355-413 11-70 (85)
233 3fs2_A 2-dehydro-3-deoxyphosph 58.0 53 0.0018 35.0 10.7 92 514-609 41-163 (298)
234 1ujp_A Tryptophan synthase alp 57.5 27 0.00091 36.3 8.2 121 514-652 91-231 (271)
235 1y0e_A Putative N-acetylmannos 57.5 25 0.00086 34.3 7.7 75 514-600 119-196 (223)
236 2bu3_A ALR0975 protein; phytoc 57.4 2.2 7.5E-05 44.6 0.0 14 197-210 6-19 (254)
237 4g1u_A Hemin transport system 57.2 2.2 7.6E-05 46.4 0.0 11 653-663 285-295 (357)
238 1thf_D HISF protein; thermophI 56.6 26 0.00088 34.9 7.7 84 527-619 30-118 (253)
239 2nv1_A Pyridoxal biosynthesis 56.3 1.4E+02 0.0048 30.9 13.6 166 530-711 31-297 (305)
240 2eqj_A Metal-response element- 56.3 6.1 0.00021 33.5 2.5 54 354-410 11-64 (66)
241 1uoz_A Putative cellulase; hyd 56.1 2.5 8.7E-05 45.4 0.2 70 513-588 172-245 (315)
242 2gou_A Oxidoreductase, FMN-bin 55.9 6.2 0.00021 42.7 3.2 85 524-619 247-337 (365)
243 1w0m_A TIM, triosephosphate is 55.6 84 0.0029 32.0 11.3 119 516-665 88-217 (226)
244 3a5i_A Flagellar biosynthesis 55.1 2.5 8.6E-05 46.6 0.0 14 465-478 199-212 (389)
245 3tha_A Tryptophan synthase alp 55.1 29 0.00099 36.0 7.9 90 517-609 18-123 (252)
246 1u83_A Phosphosulfolactate syn 54.8 16 0.00056 38.6 6.0 61 464-548 133-193 (276)
247 2l4h_A Calcium and integrin-bi 54.6 2.6 8.9E-05 41.2 0.0 14 204-217 3-16 (214)
248 1pii_A N-(5'phosphoribosyl)ant 54.5 81 0.0028 35.3 12.0 124 514-657 108-243 (452)
249 4e4j_A Arginine deiminase; L-a 54.3 2.6 9E-05 46.5 0.0 61 514-581 247-311 (433)
250 3jrx_A Acetyl-COA carboxylase 54.2 2.7 9.1E-05 48.6 0.0 24 193-218 564-587 (587)
251 3vnd_A TSA, tryptophan synthas 54.2 29 0.00099 36.1 7.8 64 519-582 24-106 (267)
252 2c0d_A Thioredoxin peroxidase 54.1 2.7 9.1E-05 41.9 0.0 9 385-393 156-164 (221)
253 3b0g_A NII3, nitrite reductase 54.0 2.7 9.2E-05 48.5 0.0 15 223-237 20-34 (591)
254 3c3r_A Programmed cell death 6 53.9 3.6 0.00012 44.7 1.0 13 727-739 320-332 (380)
255 3v5u_A Uncharacterized membran 53.7 2.7 9.4E-05 44.9 0.0 9 202-210 312-320 (320)
256 3dfz_A SIRC, precorrin-2 dehyd 53.6 2.8 9.4E-05 42.7 0.0 34 511-548 29-62 (223)
257 2l8d_A Lamin-B receptor; DNA b 53.6 9.4 0.00032 32.3 3.2 55 354-411 7-62 (66)
258 2axq_A Saccharopine dehydrogen 53.5 2.8 9.5E-05 46.9 0.0 39 700-742 420-460 (467)
259 1m3u_A 3-methyl-2-oxobutanoate 53.3 6.2 0.00021 41.4 2.6 62 526-598 160-222 (264)
260 1i60_A IOLI protein; beta barr 53.0 62 0.0021 31.6 9.8 83 526-609 83-175 (278)
261 1f76_A Dihydroorotate dehydrog 53.0 27 0.00091 36.7 7.4 36 514-549 211-247 (336)
262 1yxy_A Putative N-acetylmannos 52.9 50 0.0017 32.5 9.1 116 529-656 90-221 (234)
263 2dig_A Lamin-B receptor; tudor 52.9 6.7 0.00023 33.2 2.2 54 354-410 10-64 (68)
264 2f6u_A GGGPS, (S)-3-O-geranylg 52.8 12 0.00043 38.3 4.7 54 520-578 13-66 (234)
265 1tqx_A D-ribulose-5-phosphate 52.8 25 0.00086 35.7 6.9 112 517-654 89-205 (227)
266 1pii_A N-(5'phosphoribosyl)ant 52.4 44 0.0015 37.5 9.4 105 528-645 69-179 (452)
267 2h6r_A Triosephosphate isomera 52.3 46 0.0016 33.2 8.7 54 612-666 158-215 (219)
268 2qgy_A Enolase from the enviro 52.1 28 0.00096 37.5 7.6 104 514-632 194-303 (391)
269 1ydo_A HMG-COA lyase; TIM-barr 52.0 1E+02 0.0035 32.4 11.8 153 530-685 84-284 (307)
270 2p10_A MLL9387 protein; putati 51.7 46 0.0016 35.3 8.9 130 514-653 94-262 (286)
271 1nvm_A HOA, 4-hydroxy-2-oxoval 51.4 1.9E+02 0.0064 30.7 13.8 127 530-665 96-248 (345)
272 3inp_A D-ribulose-phosphate 3- 51.1 11 0.00037 39.0 4.0 122 515-652 87-225 (246)
273 2e6f_A Dihydroorotate dehydrog 51.1 21 0.00073 37.0 6.3 35 514-548 160-196 (314)
274 2ftp_A Hydroxymethylglutaryl-C 50.9 1.5E+02 0.0052 30.8 12.8 144 513-665 75-263 (302)
275 3zwt_A Dihydroorotate dehydrog 50.8 49 0.0017 35.9 9.2 37 514-550 220-257 (367)
276 1ydn_A Hydroxymethylglutaryl-C 50.7 34 0.0012 35.4 7.7 53 524-579 152-205 (295)
277 2yr1_A 3-dehydroquinate dehydr 50.7 23 0.00078 36.5 6.3 104 466-582 96-209 (257)
278 3ndo_A Deoxyribose-phosphate a 50.6 26 0.00089 36.0 6.7 122 521-650 74-221 (231)
279 1w8s_A FBP aldolase, fructose- 50.5 22 0.00074 36.7 6.2 56 513-570 195-252 (263)
280 2ps2_A Putative mandelate race 50.4 72 0.0025 33.9 10.4 101 514-632 190-297 (371)
281 2q02_A Putative cytoplasmic pr 50.3 39 0.0013 33.2 7.8 81 527-609 85-171 (272)
282 2oem_A 2,3-diketo-5-methylthio 50.0 48 0.0016 36.8 9.1 113 511-634 204-339 (413)
283 2qrj_A Saccharopine dehydrogen 49.9 3.4 0.00012 45.6 0.0 23 517-542 218-240 (394)
284 3tml_A 2-dehydro-3-deoxyphosph 49.8 95 0.0032 32.8 11.0 92 514-609 17-139 (288)
285 1jr2_A Uroporphyrinogen-III sy 49.3 3.5 0.00012 42.3 0.0 7 558-564 143-149 (286)
286 3i65_A Dihydroorotate dehydrog 49.2 39 0.0013 37.5 8.2 38 514-551 268-307 (415)
287 3sz8_A 2-dehydro-3-deoxyphosph 49.2 95 0.0032 32.8 10.8 93 514-609 20-142 (285)
288 3k9f_C DNA topoisomerase 4 sub 48.3 3.8 0.00013 43.1 0.0 9 370-378 144-152 (268)
289 2w6r_A Imidazole glycerol phos 48.2 9.3 0.00032 38.5 2.9 65 527-599 30-94 (266)
290 2xci_A KDO-transferase, 3-deox 48.0 3.8 0.00013 43.5 0.0 16 361-378 113-128 (374)
291 3lx2_A DNA polymerase sliding 47.9 3.8 0.00013 41.8 0.0 12 198-209 248-259 (259)
292 1rvk_A Isomerase/lactonizing e 47.5 37 0.0013 36.2 7.6 104 513-631 199-309 (382)
293 2cw6_A Hydroxymethylglutaryl-C 47.4 1.9E+02 0.0065 29.9 12.8 135 530-666 83-261 (298)
294 2o56_A Putative mandelate race 47.0 42 0.0014 36.2 8.0 106 512-632 213-324 (407)
295 1tvm_A PTS system, galactitol- 46.9 6.4 0.00022 35.6 1.3 8 201-208 2-9 (113)
296 3tdn_A FLR symmetric alpha-bet 46.3 21 0.00073 35.7 5.2 66 527-600 35-100 (247)
297 3kru_A NADH:flavin oxidoreduct 46.3 34 0.0012 36.8 7.0 82 511-599 207-297 (343)
298 2nli_A Lactate oxidase; flavoe 46.2 23 0.00078 38.4 5.7 29 514-548 229-258 (368)
299 2ovl_A Putative racemase; stru 46.1 34 0.0012 36.5 7.0 104 514-632 191-300 (371)
300 1mzh_A Deoxyribose-phosphate a 45.8 44 0.0015 33.5 7.4 32 517-548 122-153 (225)
301 1geq_A Tryptophan synthase alp 45.6 41 0.0014 33.4 7.1 65 513-579 3-86 (248)
302 3irs_A Uncharacterized protein 45.6 65 0.0022 32.9 8.9 92 513-606 91-187 (291)
303 1k8w_A TRNA pseudouridine synt 45.5 4.4 0.00015 43.8 0.0 13 534-546 199-211 (327)
304 2yru_A Steroid receptor RNA ac 45.3 31 0.0011 32.0 5.7 46 657-708 63-108 (118)
305 4b1m_A Levanase; hydrolase, CB 44.9 4.5 0.00016 39.4 0.0 8 247-254 37-44 (185)
306 2eko_A Histone acetyltransfera 44.8 18 0.00062 31.9 3.8 56 353-408 6-67 (87)
307 3m47_A Orotidine 5'-phosphate 44.3 1.1E+02 0.0038 30.7 10.2 128 515-652 65-204 (228)
308 3tdn_A FLR symmetric alpha-bet 44.3 9 0.00031 38.4 2.1 35 514-552 79-113 (247)
309 2lcc_A AT-rich interactive dom 44.2 8.5 0.00029 33.1 1.6 58 355-412 4-66 (76)
310 2yjp_A Putative ABC transporte 44.2 4.7 0.00016 40.4 0.0 7 228-234 18-24 (291)
311 2poz_A Putative dehydratase; o 43.9 47 0.0016 35.7 7.8 106 512-632 197-308 (392)
312 1icp_A OPR1, 12-oxophytodienoa 43.9 7.9 0.00027 42.1 1.7 88 524-619 253-345 (376)
313 2c07_A 3-oxoacyl-(acyl-carrier 43.8 4.9 0.00017 40.7 0.0 14 465-478 138-151 (285)
314 3bo9_A Putative nitroalkan dio 43.8 20 0.00069 37.9 4.7 73 514-599 124-196 (326)
315 3l49_A ABC sugar (ribose) tran 43.7 73 0.0025 31.2 8.6 61 515-583 36-96 (291)
316 1eyb_A Homogentisate 1,2-dioxy 43.7 5.5 0.00019 44.9 0.4 47 204-254 3-49 (471)
317 4f0h_A Ribulose bisphosphate c 43.6 52 0.0018 37.4 8.2 94 511-614 241-350 (493)
318 3tut_A RNA 3'-terminal phospha 43.6 4.9 0.00017 43.9 0.0 13 245-257 48-60 (358)
319 2og9_A Mandelate racemase/muco 43.5 30 0.001 37.3 6.2 104 514-632 207-316 (393)
320 3fdr_A Tudor and KH domain-con 43.5 14 0.00047 32.1 2.9 56 355-413 26-82 (94)
321 2m0o_A PHD finger protein 1; t 43.4 17 0.00057 31.7 3.2 55 352-409 22-76 (79)
322 2x7v_A Probable endonuclease 4 43.4 80 0.0027 31.2 8.9 83 527-609 89-179 (287)
323 3i4k_A Muconate lactonizing en 43.4 1E+02 0.0036 33.0 10.4 104 514-632 194-303 (383)
324 2qde_A Mandelate racemase/muco 43.4 38 0.0013 36.5 6.9 103 514-631 189-297 (397)
325 3jr2_A Hexulose-6-phosphate sy 43.3 1.9E+02 0.0064 28.3 11.5 109 532-654 75-198 (218)
326 2apo_A Probable tRNA pseudouri 43.2 5 0.00017 43.8 0.0 47 516-563 189-241 (357)
327 1nu5_A Chloromuconate cycloiso 43.0 99 0.0034 32.7 10.0 104 514-632 188-297 (370)
328 3sgz_A Hydroxyacid oxidase 2; 42.8 25 0.00086 38.2 5.4 30 514-549 217-247 (352)
329 1sfl_A 3-dehydroquinate dehydr 42.8 59 0.002 33.0 7.9 66 512-582 123-195 (238)
330 3gka_A N-ethylmaleimide reduct 42.5 33 0.0011 37.1 6.3 78 526-619 249-331 (361)
331 3i09_A Periplasmic branched-ch 42.5 1.7E+02 0.0059 29.8 11.5 88 516-609 115-204 (375)
332 2zad_A Muconate cycloisomerase 42.4 2.2E+02 0.0075 29.8 12.5 106 514-632 182-292 (345)
333 2e5q_A PHD finger protein 19; 42.4 28 0.00097 29.1 4.3 54 354-410 5-58 (63)
334 3pnr_B Pbicp-C; immunoglobulin 42.4 5.3 0.00018 38.9 0.0 25 295-319 62-86 (187)
335 3cio_A ETK, tyrosine-protein k 42.4 5.3 0.00018 41.6 0.0 11 574-584 214-224 (299)
336 1jvn_A Glutamine, bifunctional 42.3 45 0.0015 38.0 7.6 81 527-619 452-544 (555)
337 2pgw_A Muconate cycloisomerase 42.2 1.9E+02 0.0066 30.7 12.2 106 514-633 136-249 (384)
338 2fyw_A Conserved hypothetical 42.0 54 0.0019 33.8 7.6 62 516-583 40-104 (267)
339 1jxh_A Phosphomethylpyrimidine 42.0 5.4 0.00018 40.9 0.0 21 527-547 178-198 (288)
340 1to3_A Putative aldolase YIHT; 42.0 46 0.0016 35.1 7.2 49 527-577 177-226 (304)
341 2ftp_A Hydroxymethylglutaryl-C 41.9 42 0.0014 35.0 6.8 54 523-579 155-209 (302)
342 2yzr_A Pyridoxal biosynthesis 41.8 21 0.00073 38.5 4.6 49 530-581 27-82 (330)
343 1mdl_A Mandelate racemase; iso 41.8 29 0.001 36.7 5.7 103 514-631 189-297 (359)
344 1qtw_A Endonuclease IV; DNA re 41.8 1.1E+02 0.0037 30.1 9.6 81 528-609 90-180 (285)
345 1jcn_A Inosine monophosphate d 41.7 39 0.0013 37.7 7.0 59 514-578 296-363 (514)
346 3sd4_A PHD finger protein 20; 41.7 16 0.00055 30.4 2.9 58 353-410 9-68 (69)
347 2ygr_A Uvrabc system protein A 41.6 5.5 0.00019 48.8 0.0 22 717-739 891-912 (993)
348 1ypf_A GMP reductase; GUAC, pu 41.5 37 0.0013 36.0 6.4 28 515-548 150-178 (336)
349 2gl5_A Putative dehydratase pr 41.4 41 0.0014 36.3 6.8 106 512-632 216-327 (410)
350 1kbi_A Cytochrome B2, L-LCR; f 41.4 22 0.00074 40.4 4.8 29 514-548 343-372 (511)
351 2hsa_B 12-oxophytodienoate red 41.3 46 0.0016 36.5 7.2 89 524-619 257-363 (402)
352 3gd6_A Muconate cycloisomerase 41.0 55 0.0019 35.4 7.8 105 513-632 185-296 (391)
353 2z6i_A Trans-2-enoyl-ACP reduc 40.9 16 0.00056 38.5 3.5 73 514-600 110-183 (332)
354 1vhc_A Putative KHG/KDPG aldol 40.8 2.9E+02 0.01 27.6 12.8 123 531-683 80-211 (224)
355 3mea_A SAGA-associated factor 40.7 1.1E+02 0.0036 30.5 9.0 65 320-395 91-157 (180)
356 1r17_A Fibrinogen-binding prot 40.7 5.8 0.0002 42.7 0.0 7 201-207 2-8 (343)
357 3eez_A Putative mandelate race 40.6 1.4E+02 0.0049 32.0 10.9 102 513-632 188-295 (378)
358 3vzx_A Heptaprenylglyceryl pho 40.4 39 0.0013 34.5 6.1 43 532-579 23-65 (228)
359 3glc_A Aldolase LSRF; TIM barr 40.3 39 0.0013 35.7 6.2 56 513-570 222-278 (295)
360 2gjl_A Hypothetical protein PA 40.2 52 0.0018 34.4 7.2 74 514-599 118-192 (328)
361 2oz8_A MLL7089 protein; struct 40.0 1.5E+02 0.005 31.9 10.9 100 514-631 190-296 (389)
362 1n7k_A Deoxyribose-phosphate a 39.9 1.2E+02 0.004 31.1 9.5 120 522-651 83-224 (234)
363 2rdx_A Mandelate racemase/muco 39.7 2.4E+02 0.0083 29.9 12.5 105 514-633 134-245 (379)
364 4ay7_A Methylcobalamin\: coenz 39.4 1.7E+02 0.0058 30.8 11.1 99 526-634 189-294 (348)
365 3aty_A Tcoye, prostaglandin F2 39.4 66 0.0022 34.9 8.0 85 523-619 262-351 (379)
366 3lab_A Putative KDPG (2-keto-3 39.1 1.6E+02 0.0055 29.9 10.3 114 515-647 13-136 (217)
367 2tps_A Protein (thiamin phosph 39.0 30 0.001 33.7 4.8 53 517-578 117-177 (227)
368 3rr1_A GALD, putative D-galact 39.0 1.1E+02 0.0039 33.2 9.9 125 512-645 112-253 (405)
369 3w01_A Heptaprenylglyceryl pho 38.8 54 0.0019 33.7 6.9 42 533-579 29-70 (235)
370 1sfl_A 3-dehydroquinate dehydr 38.8 94 0.0032 31.5 8.6 81 516-598 5-89 (238)
371 1t3j_A Mitofusin 1; coiled coi 38.7 4.2 0.00014 36.7 -1.2 23 225-247 25-47 (96)
372 1ydx_A Type I restriction enzy 38.6 6.5 0.00022 41.7 0.0 11 357-367 82-92 (406)
373 3l6u_A ABC-type sugar transpor 38.6 56 0.0019 32.1 6.8 61 515-583 39-99 (293)
374 3o63_A Probable thiamine-phosp 38.5 25 0.00085 36.0 4.3 69 517-598 136-209 (243)
375 1ydn_A Hydroxymethylglutaryl-C 38.4 77 0.0026 32.7 8.1 74 524-607 23-99 (295)
376 3cwo_X Beta/alpha-barrel prote 38.3 36 0.0012 32.3 5.2 49 514-567 174-222 (237)
377 2hzg_A Mandelate racemase/muco 38.2 55 0.0019 35.3 7.2 104 513-631 192-304 (401)
378 3kh7_A Thiol:disulfide interch 38.2 21 0.00072 33.3 3.5 10 385-394 143-152 (176)
379 1h1y_A D-ribulose-5-phosphate 37.9 1E+02 0.0034 30.5 8.6 125 515-654 65-205 (228)
380 3b0p_A TRNA-dihydrouridine syn 37.8 52 0.0018 35.2 6.8 36 514-549 126-166 (350)
381 2qdd_A Mandelate racemase/muco 37.6 91 0.0031 33.2 8.7 99 514-631 190-294 (378)
382 4ab4_A Xenobiotic reductase B; 37.6 21 0.0007 38.8 3.7 78 526-619 241-323 (362)
383 2d2a_A SUFA protein; iron-sulf 37.6 6.9 0.00024 37.4 0.0 23 311-333 90-112 (145)
384 3fwy_A Light-independent proto 37.5 7 0.00024 41.3 0.0 7 221-227 9-15 (314)
385 1eep_A Inosine 5'-monophosphat 37.5 37 0.0013 36.8 5.7 28 514-546 194-221 (404)
386 2l72_A Tgadf, actin depolymeri 37.4 7 0.00024 36.9 0.0 11 385-395 89-99 (139)
387 1gox_A (S)-2-hydroxy-acid oxid 37.4 49 0.0017 35.6 6.6 29 514-548 225-254 (370)
388 3uau_A JLPA, surface-exposed l 37.3 7.1 0.00024 41.3 0.0 8 356-363 141-148 (379)
389 3bw2_A 2-nitropropane dioxygen 37.3 31 0.0011 36.9 5.0 75 514-600 145-229 (369)
390 3g1w_A Sugar ABC transporter; 37.3 64 0.0022 31.9 7.1 61 515-583 35-96 (305)
391 2wje_A CPS4B, tyrosine-protein 37.2 36 0.0012 34.1 5.2 74 522-598 19-96 (247)
392 2y88_A Phosphoribosyl isomeras 37.1 1.2E+02 0.0043 29.6 9.1 132 514-654 74-229 (244)
393 2grx_C Protein TONB; beta barr 37.1 7.1 0.00024 40.1 0.0 12 384-395 163-174 (229)
394 2rnz_A Histone acetyltransfera 36.9 16 0.00056 32.7 2.3 55 353-408 22-78 (94)
395 2yxb_A Coenzyme B12-dependent 36.8 27 0.00092 33.3 4.0 85 562-652 35-130 (161)
396 3ces_A MNMG, tRNA uridine 5-ca 36.7 7.3 0.00025 45.6 0.0 20 461-480 332-351 (651)
397 3bjs_A Mandelate racemase/muco 36.6 62 0.0021 35.4 7.4 91 514-619 229-326 (428)
398 4adt_A Pyridoxine biosynthetic 36.5 1.1E+02 0.0038 32.3 9.0 28 514-545 78-105 (297)
399 4faj_A PRGZ; substrate binding 36.4 7.5 0.00026 41.4 0.0 10 204-213 2-11 (564)
400 2nwr_A 2-dehydro-3-deoxyphosph 36.3 2.7E+02 0.0091 29.0 11.7 94 514-609 3-126 (267)
401 3m9y_A Triosephosphate isomera 36.3 2.6E+02 0.009 28.9 11.6 131 523-666 106-253 (254)
402 2pp0_A L-talarate/galactarate 36.1 76 0.0026 34.3 7.9 104 514-632 220-329 (398)
403 1nmo_A Hypothetical protein YB 36.1 72 0.0025 32.5 7.3 58 517-583 38-100 (247)
404 3vav_A 3-methyl-2-oxobutanoate 36.0 43 0.0015 35.3 5.7 62 525-597 171-233 (275)
405 1tkk_A Similar to chloromucona 36.0 2.1E+02 0.0072 30.1 11.2 105 514-631 185-295 (366)
406 3oti_A CALG3; calicheamicin, T 36.0 7.6 0.00026 40.7 0.0 37 513-549 231-272 (398)
407 2qq6_A Mandelate racemase/muco 35.7 61 0.0021 35.1 7.1 91 513-618 209-305 (410)
408 2p8b_A Mandelate racemase/muco 35.4 98 0.0034 32.8 8.5 104 514-632 185-295 (369)
409 2c6q_A GMP reductase 2; TIM ba 35.4 1.4E+02 0.0048 32.0 9.7 115 528-654 118-256 (351)
410 1vzw_A Phosphoribosyl isomeras 35.3 2.3E+02 0.0079 27.8 10.8 128 514-654 75-226 (244)
411 3dx5_A Uncharacterized protein 35.2 1.9E+02 0.0064 28.5 10.1 81 527-609 84-173 (286)
412 2eqm_A PHD finger protein 20-l 34.9 24 0.00083 31.0 3.1 59 353-411 16-76 (88)
413 2ro0_A Histone acetyltransfera 34.9 23 0.0008 31.5 3.0 55 353-408 20-76 (92)
414 3noy_A 4-hydroxy-3-methylbut-2 34.8 79 0.0027 34.7 7.6 105 511-631 26-139 (366)
415 2x7x_A Sensor protein; transfe 34.7 1.5E+02 0.005 29.9 9.4 60 515-582 37-96 (325)
416 3h8z_A FragIle X mental retard 34.6 16 0.00055 34.5 2.0 54 355-411 59-118 (128)
417 1k77_A EC1530, hypothetical pr 34.5 1.5E+02 0.005 28.8 9.1 83 526-609 84-179 (260)
418 1p4c_A L(+)-mandelate dehydrog 34.2 27 0.00092 37.9 3.9 28 514-547 225-253 (380)
419 2qv7_A Diacylglycerol kinase D 34.1 8.5 0.00029 40.5 0.0 9 201-209 2-10 (337)
420 1jr2_A Uroporphyrinogen-III sy 33.9 8.6 0.00029 39.4 0.0 8 540-547 210-217 (286)
421 1yya_A Triosephosphate isomera 33.9 4E+02 0.014 27.5 12.4 130 523-665 102-248 (250)
422 3ozy_A Putative mandelate race 33.8 74 0.0025 34.3 7.3 104 513-631 194-304 (389)
423 3ceu_A Thiamine phosphate pyro 33.2 31 0.0011 33.9 3.9 55 516-578 88-149 (210)
424 1l6s_A Porphobilinogen synthas 33.1 73 0.0025 34.3 6.8 49 524-581 223-271 (323)
425 1gp8_A Protein (scaffolding pr 33.1 30 0.001 26.5 2.8 26 658-683 13-38 (40)
426 3nwr_A A rubisco-like protein; 32.8 81 0.0028 35.3 7.5 76 511-598 226-308 (432)
427 3tva_A Xylose isomerase domain 32.6 1E+02 0.0036 30.6 7.8 77 527-609 102-185 (290)
428 3k30_A Histamine dehydrogenase 32.5 49 0.0017 38.2 6.0 99 510-619 220-339 (690)
429 3iwp_A Copper homeostasis prot 32.5 1.6E+02 0.0054 31.2 9.3 116 530-651 49-187 (287)
430 3kws_A Putative sugar isomeras 32.4 1.6E+02 0.0054 29.2 9.1 82 527-609 104-199 (287)
431 3quf_A Extracellular solute-bi 32.2 9.6 0.00033 40.0 0.0 11 468-478 159-169 (414)
432 2b3f_A Glucose-binding protein 32.1 11 0.00037 39.7 0.4 13 197-209 388-400 (400)
433 4fl4_A Glycoside hydrolase fam 32.1 9.6 0.00033 33.8 0.0 17 233-250 20-36 (88)
434 1of8_A Phospho-2-dehydro-3-deo 32.1 3.4E+02 0.012 29.8 12.0 105 512-619 66-216 (370)
435 3r0u_A Enzyme of enolase super 32.0 3.2E+02 0.011 29.3 12.0 107 513-633 130-247 (379)
436 1qwz_A NPQTN specific sortase 32.0 16 0.00054 37.5 1.5 12 467-478 178-189 (235)
437 3uug_A Multiple sugar-binding 31.9 80 0.0027 31.6 6.8 61 515-583 34-94 (330)
438 1yad_A Regulatory protein TENI 31.9 50 0.0017 32.3 5.2 54 518-578 112-169 (221)
439 2c43_A Aminoadipate-semialdehy 31.8 13 0.00043 39.7 0.8 14 201-214 2-15 (323)
440 3hbl_A Pyruvate carboxylase; T 31.7 2.1E+02 0.0071 35.7 11.6 199 529-743 629-873 (1150)
441 2ox4_A Putative mandelate race 31.7 45 0.0016 35.9 5.2 106 512-632 207-318 (403)
442 1tx2_A DHPS, dihydropteroate s 31.7 99 0.0034 32.7 7.7 66 525-599 61-133 (297)
443 4fo4_A Inosine 5'-monophosphat 31.7 77 0.0026 34.4 7.0 28 514-546 149-176 (366)
444 3obk_A Delta-aminolevulinic ac 31.6 62 0.0021 35.2 6.1 49 525-582 245-293 (356)
445 3jva_A Dipeptide epimerase; en 31.4 85 0.0029 33.3 7.2 105 513-632 182-292 (354)
446 2jqj_A DNA damage response pro 31.4 18 0.00062 34.1 1.8 13 195-208 138-150 (151)
447 3qc0_A Sugar isomerase; TIM ba 31.3 1.3E+02 0.0044 29.3 8.1 81 527-609 83-175 (275)
448 3ozy_A Putative mandelate race 31.2 3.5E+02 0.012 29.0 12.1 106 513-633 136-255 (389)
449 2k3y_A Chromatin modification- 31.0 19 0.00065 34.3 1.8 61 355-416 8-109 (136)
450 3n0w_A ABC branched chain amin 30.9 2.8E+02 0.0095 28.4 10.9 89 515-609 116-206 (379)
451 1twd_A Copper homeostasis prot 30.7 1.4E+02 0.0049 31.1 8.5 116 530-651 11-149 (256)
452 3go2_A Putative L-alanine-DL-g 30.6 2E+02 0.007 31.1 10.2 103 512-631 211-318 (409)
453 2agk_A 1-(5-phosphoribosyl)-5- 30.6 82 0.0028 32.3 6.7 52 514-567 205-258 (260)
454 3o07_A Pyridoxine biosynthesis 30.3 28 0.00096 37.0 3.1 55 517-580 14-75 (291)
455 3rce_A Oligosaccharide transfe 30.3 11 0.00037 44.8 0.0 30 169-201 680-709 (724)
456 2c6q_A GMP reductase 2; TIM ba 30.3 91 0.0031 33.4 7.2 29 514-547 161-189 (351)
457 3aal_A Probable endonuclease 4 30.2 1E+02 0.0036 31.0 7.4 82 527-609 94-184 (303)
458 3m9w_A D-xylose-binding peripl 30.2 1.2E+02 0.0041 30.2 7.7 61 515-583 33-93 (313)
459 2ad9_A Polypyrimidine tract-bi 30.1 13 0.00046 34.0 0.6 24 226-251 26-49 (119)
460 2nql_A AGR_PAT_674P, isomerase 30.1 56 0.0019 35.0 5.6 103 514-631 208-315 (388)
461 1bwv_A Rubisco, protein (ribul 30.1 62 0.0021 36.8 6.0 96 512-615 242-351 (493)
462 2xk0_A Polycomb protein PCL; t 30.0 36 0.0012 29.0 3.1 53 355-412 14-66 (69)
463 1w5q_A Delta-aminolevulinic ac 29.9 58 0.002 35.3 5.5 48 525-581 238-285 (337)
464 3ble_A Citramalate synthase fr 29.9 3.2E+02 0.011 28.9 11.3 151 533-685 102-291 (337)
465 2yc6_A Triosephosphate isomera 29.9 2.5E+02 0.0085 29.2 10.2 131 523-667 104-253 (257)
466 4dve_A Biotin transporter BIOY 29.8 12 0.0004 37.7 0.2 13 585-597 44-56 (198)
467 3m9q_A Protein MALE-specific l 29.7 21 0.00071 32.5 1.8 60 353-413 16-87 (101)
468 2y88_A Phosphoribosyl isomeras 29.6 1.6E+02 0.0056 28.8 8.5 70 528-609 150-225 (244)
469 3ffs_A Inosine-5-monophosphate 29.6 1.1E+02 0.0039 33.6 8.0 28 514-546 184-211 (400)
470 1tzz_A Hypothetical protein L1 29.6 55 0.0019 35.2 5.4 91 514-619 210-310 (392)
471 2e5p_A Protein PHF1, PHD finge 29.6 28 0.00096 29.6 2.4 56 353-411 6-61 (68)
472 3ksm_A ABC-type sugar transpor 29.6 1.5E+02 0.005 28.6 8.1 61 514-582 30-93 (276)
473 3lmz_A Putative sugar isomeras 29.5 2.4E+02 0.0083 27.5 9.8 76 524-609 86-164 (257)
474 1h7n_A 5-aminolaevulinic acid 29.4 89 0.003 33.9 6.8 50 524-582 240-290 (342)
475 1nvm_A HOA, 4-hydroxy-2-oxoval 29.4 1.6E+02 0.0055 31.2 8.9 55 522-579 144-200 (345)
476 3tcm_A Alanine aminotransferas 29.3 12 0.0004 41.3 0.1 20 204-223 2-21 (500)
477 3vni_A Xylose isomerase domain 29.3 2.1E+02 0.0071 28.3 9.4 83 527-609 88-185 (294)
478 2cw6_A Hydroxymethylglutaryl-C 29.3 1.1E+02 0.0038 31.7 7.5 53 524-579 153-206 (298)
479 3b4u_A Dihydrodipicolinate syn 29.3 90 0.0031 32.5 6.8 59 522-580 19-79 (294)
480 2h9a_B CO dehydrogenase/acetyl 29.3 79 0.0027 33.7 6.4 88 527-619 74-170 (310)
481 2fvy_A D-galactose-binding per 29.2 1.2E+02 0.0042 29.7 7.6 59 516-582 35-93 (309)
482 4e38_A Keto-hydroxyglutarate-a 29.2 3.9E+02 0.013 27.2 11.4 114 516-647 35-151 (232)
483 3cpr_A Dihydrodipicolinate syn 29.2 1E+02 0.0036 32.2 7.3 58 522-579 32-91 (304)
484 1rpx_A Protein (ribulose-phosp 29.0 1.6E+02 0.0056 28.7 8.4 125 515-653 69-210 (230)
485 3tr9_A Dihydropteroate synthas 28.9 12 0.0004 40.2 0.0 14 200-213 301-314 (314)
486 1pko_A Myelin oligodendrocyte 28.9 12 0.0004 33.2 0.0 10 200-209 130-139 (139)
487 2pi2_E Replication protein A 1 28.8 12 0.0004 35.8 0.0 8 272-279 47-54 (142)
488 3flu_A DHDPS, dihydrodipicolin 28.6 94 0.0032 32.3 6.8 58 522-579 23-82 (297)
489 1w1z_A Delta-aminolevulinic ac 28.6 57 0.002 35.2 5.1 49 525-582 231-279 (328)
490 3cpt_A Mitogen-activated prote 28.6 12 0.00041 36.0 0.0 9 387-395 107-115 (143)
491 2j6v_A UV endonuclease, UVDE; 28.5 13 0.00046 39.0 0.4 20 204-223 3-22 (301)
492 1xi3_A Thiamine phosphate pyro 28.5 35 0.0012 32.7 3.3 57 517-578 109-167 (215)
493 1nwa_A Peptide methionine sulf 28.5 12 0.00041 37.9 0.0 14 204-217 3-16 (203)
494 3cny_A Inositol catabolism pro 28.4 1E+02 0.0035 30.6 6.8 76 526-603 89-185 (301)
495 3u61_A DNA polymerase accessor 28.3 13 0.00043 37.6 0.1 14 200-213 186-199 (199)
496 3tq8_A Dihydrofolate reductase 28.3 18 0.00061 35.6 1.2 16 198-213 163-178 (178)
497 3etc_A AMP-binding protein; ad 28.2 15 0.00052 41.2 0.8 39 209-251 3-41 (580)
498 3ovp_A Ribulose-phosphate 3-ep 28.2 36 0.0012 34.4 3.4 125 518-668 90-215 (228)
499 3q45_A Mandelate racemase/muco 28.1 1.1E+02 0.0039 32.6 7.5 109 509-632 179-293 (368)
500 3rot_A ABC sugar transporter, 28.0 1.8E+02 0.0061 28.7 8.5 61 514-582 33-95 (297)
No 1
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=100.00 E-value=6.8e-52 Score=441.82 Aligned_cols=251 Identities=25% Similarity=0.357 Sum_probs=236.8
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ .++||+|||+|||+++|++++++
T Consensus 58 ~Gl~v~GtTGE~~~Ls~~Er~~v~~~---~v~-------------------------~~~grvpViaGvg~~st~~ai~l 109 (315)
T 3si9_A 58 NGVSPVGTTGESPTLTHEEHKRIIEL---CVE-------------------------QVAKRVPVVAGAGSNSTSEAVEL 109 (315)
T ss_dssp SEEECSSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCBEEECCCSSHHHHHHH
T ss_pred CEEEeCccccCccccCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCCCHHHHHHH
Confidence 36666 899999999999999999 654 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHh-CCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAH-HENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAe-iPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+|++ +|||+||||+
T Consensus 110 a~~A~~~Gadavlv~~P~y~~~~--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdssg 187 (315)
T 3si9_A 110 AKHAEKAGADAVLVVTPYYNRPN--QRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKNIIGVKDATG 187 (315)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSC
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCCEEEEEeCCC
Confidence 99999999999999999999987 999999999999999999999999999999999999999998 9999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++. .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 188 d~~~~~~l~~~-~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~l- 265 (315)
T 3si9_A 188 KIERASEQREK-CGKDFVQLSGDDCTALGFNAHGGVGCISVSSNVAPKLCAQLHAACLCSDYKTALKLNDLLMPLNRAV- 265 (315)
T ss_dssp CTHHHHHHHHH-HCSSSEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHH-cCCCeEEEecCHHHHHHHHHcCCCEEEecHHHhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH-
Confidence 99999999873 5689999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++++.
T Consensus 266 ----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~l~~ 314 (315)
T 3si9_A 266 ----FIEPSPAGIKYAAAKLGLCGTIVRSPIV-PLSDTTKKIIDEALYHAGLLK 314 (315)
T ss_dssp ----TSSSTTHHHHHHHHHTTSSCCCCCTTSC-CCCHHHHHHHHHHHHHTTSCC
T ss_pred ----HhcCChHHHHHHHHHCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHCCCcc
Confidence 4567789999999999998899999999 999999999999999999864
No 2
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=100.00 E-value=9.4e-52 Score=436.70 Aligned_cols=250 Identities=25% Similarity=0.349 Sum_probs=234.8
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||++++++++++
T Consensus 43 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 94 (297)
T 3flu_A 43 DGIVAVGTTGESATLSVEEHTAVIEA---VVK-------------------------HVAKRVPVIAGTGANNTVEAIAL 94 (297)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSSHHHHHHH
T ss_pred CEEEeCccccCcccCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCcCHHHHHHH
Confidence 46666 899999999999999999 654 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||++||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 95 a~~a~~~Gadavlv~~P~y~~~~--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdssgd 172 (297)
T 3flu_A 95 SQAAEKAGADYTLSVVPYYNKPS--QEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPNIVGVKEASGN 172 (297)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECSCC
T ss_pred HHHHHHcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCCEEEEEeCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++ ..+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 173 ~~~~~~~~~-~~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~l-- 249 (297)
T 3flu_A 173 IGSNIELIN-RAPEGFVVLSGDDHTALPFMLCGGHGVITVAANAAPKLFADMCRAALQGDIALARELNDRLIPIYDTM-- 249 (297)
T ss_dssp HHHHHHHHH-HSCTTCEEEECCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTT--
T ss_pred HHHHHHHHH-hcCCCeEEEECcHHHHHHHHhCCCCEEEechHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 999999987 45789999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.+.+|+|+. +++++++++|+++|+++|++
T Consensus 250 ---~~~~~~~~~K~al~~~G~~~~~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 297 (297)
T 3flu_A 250 ---FCEPSPAAPKWAVSALGRCEPHVRLPLV-PLTENGQAKVRAALKASGQL 297 (297)
T ss_dssp ---TSSSTTHHHHHHHHHTTSCCCCCCTTSC-CCCHHHHHHHHHHHHHTTCC
T ss_pred ---hcCCCHHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 4556788999999999998666999999 99999999999999999874
No 3
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=100.00 E-value=7.6e-52 Score=437.64 Aligned_cols=252 Identities=22% Similarity=0.315 Sum_probs=234.4
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 36 ~gi~v~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 87 (297)
T 2rfg_A 36 HGLVPVGTTGESPTLTEEEHKRVVAL---VAE-------------------------QAQGRVPVIAGAGSNNPVEAVRY 87 (297)
T ss_dssp SEEECSSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCBEEECCCSSHHHHHHH
T ss_pred CEEEECccccchhhCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEEccCCCCHHHHHHH
Confidence 46665 789999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 88 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKds~gd 165 (297)
T 2rfg_A 88 AQHAQQAGADAVLCVAGYYNRPS--QEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPRIVGVKDATTD 165 (297)
T ss_dssp HHHHHHHTCSEEEECCCTTTCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCC
T ss_pred HHHHHhcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEeCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++ ..+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 166 ~~~~~~~~~-~~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 242 (297)
T 2rfg_A 166 LARISRERM-LINKPFSFLSGDDMTAIAYNASGGQGCISVSANIAPALYGQMQTATLQGDFREALRIHDLLAPLHEAL-- 242 (297)
T ss_dssp TTHHHHHHT-TCCSCCEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHH-hcCCCEEEEeCcHHHHHHHHHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 999999987 35678999999999999999999999999999999999999999999999999999999999998776
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCCc
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLVP 744 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~~ 744 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|+++++++.
T Consensus 243 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~~~ 292 (297)
T 2rfg_A 243 ---FREPSPAGAKYAASLLGLCNEECRLPIV-PLSEQTKSDIKNIINELYRLEH 292 (297)
T ss_dssp ---HSSSTTHHHHHHHHHTTSSCCCCCTTSC-CCCHHHHHHHHHHHHHHCC---
T ss_pred ---hcCCCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHhcchhhh
Confidence 3455688899999999998899999999 9999999999999999999874
No 4
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=100.00 E-value=1.1e-51 Score=439.74 Aligned_cols=250 Identities=24% Similarity=0.380 Sum_probs=235.6
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 59 ~Gl~v~GtTGE~~~Ls~~Er~~v~~~---~v~-------------------------~~~grvpViaGvg~~st~eai~l 110 (314)
T 3qze_A 59 NAIVAVGTTGESATLDVEEHIQVIRR---VVD-------------------------QVKGRIPVIAGTGANSTREAVAL 110 (314)
T ss_dssp CEEEESSGGGTGGGCCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCcCHHHHHHH
Confidence 46666 799999999999999999 654 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 111 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd 188 (314)
T 3qze_A 111 TEAAKSGGADACLLVTPYYNKPT--QEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEATGD 188 (314)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCC
T ss_pred HHHHHHcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEcCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++ ..+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 189 ~~~~~~~~~-~~~~~f~v~~G~d~~~l~~l~~Ga~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~l-- 265 (314)
T 3qze_A 189 LQRAKEVIE-RVGKDFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLHKAL-- 265 (314)
T ss_dssp HHHHHHHHH-HSCTTSEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHH-HcCCCeEEEecChHHHHHHHHCCCCEEEecHHhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 999999987 46789999999999999999999999999999999999999999999999999999999999998766
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.+.+|+|+. +++++++++|+++|++++++
T Consensus 266 ---~~~~~~~~~K~al~~~G~~~~~~R~Pl~-~l~~~~~~~l~~~l~~~~l~ 313 (314)
T 3qze_A 266 ---FIESNPIPVKWALHEMGLIPEGIRLPLT-WLSPRCHEPLRQAMRQTGVL 313 (314)
T ss_dssp ---TSSSTTHHHHHHHHHTTSSCSBCCTTSC-CCCGGGHHHHHHHHHHTTCC
T ss_pred ---HccCCHHHHHHHHHHCCCCCCCcCCCCC-CCCHHHHHHHHHHHHhcCCc
Confidence 4556778899999999999888999999 99999999999999999875
No 5
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=100.00 E-value=1.5e-51 Score=437.26 Aligned_cols=253 Identities=34% Similarity=0.674 Sum_probs=234.6
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 50 ~Gl~v~GtTGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pviaGvg~~~t~~ai~l 101 (307)
T 3s5o_A 50 RGFVVQGSNGEFPFLTSSERLEVVSR---VRQ-------------------------AMPKNRLLLAGSGCESTQATVEM 101 (307)
T ss_dssp SEEEESSGGGTGGGSCHHHHHHHHHH---HHH-------------------------TSCTTSEEEEECCCSSHHHHHHH
T ss_pred CEEEECccccchhhCCHHHHHHHHHH---HHH-------------------------HcCCCCcEEEecCCCCHHHHHHH
Confidence 46666 889999999999999999 654 45689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||+++..+++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 102 a~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd 181 (307)
T 3s5o_A 102 TVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPNIVGMXDSGGD 181 (307)
T ss_dssp HHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECSCC
T ss_pred HHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEEEcCCCC
Confidence 99999999999999999999732249999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.+++++..+++|.||+|.|+++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++...+
T Consensus 182 ~~~~~~~~~~~~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~~~~~~-- 259 (307)
T 3s5o_A 182 VTRIGLIVHKTRKQDFQVLAGSAGFLMASYALGAVGGVCALANVLGAQVCQLERLCCTGQWEDAQKLQHRLIEPNAAV-- 259 (307)
T ss_dssp HHHHHHHHHHTTTSSCEEEESSGGGHHHHHHHTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHhccCCCeEEEeCcHHHHHHHHHcCCCEEEechhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 999999887434578999999999999999999999999999999999999999999999999999999999987765
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
...+++..+|++|+++|++.|.+|+|+. +++++++++|+++|+++|++
T Consensus 260 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~g~~ 307 (307)
T 3s5o_A 260 ---TRRFGIPGLKKIMDWFGYYGGPCRAPLQ-ELSPAEEEALRMDFTSNGWL 307 (307)
T ss_dssp ---TTTTHHHHHHHHHHHHTSCCCCCCTTSC-CCCHHHHHHHHHHHHTTTCC
T ss_pred ---HcccCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 4456688999999999999999999999 99999999999999998874
No 6
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=100.00 E-value=9e-52 Score=435.42 Aligned_cols=250 Identities=23% Similarity=0.384 Sum_probs=234.6
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|++++++++++
T Consensus 37 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pviaGvg~~~t~~ai~l 88 (291)
T 3tak_A 37 NSIVAVGTTGEASTLSMEEHTQVIKE---IIR-------------------------VANKRIPIIAGTGANSTREAIEL 88 (291)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSSHHHHHHH
T ss_pred CEEEECccccccccCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEEeCCCCCHHHHHHH
Confidence 46665 899999999999999999 654 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++|||+||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 89 a~~a~~~Gadavlv~~P~y~~~~--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ssgd 166 (291)
T 3tak_A 89 TKAAKDLGADAALLVTPYYNKPT--QEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPNIVGIKDATGD 166 (291)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCC
T ss_pred HHHHHhcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCCEEEEEeCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++. .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 167 ~~~~~~~~~~-~~~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~l-- 243 (291)
T 3tak_A 167 VPRGKALIDA-LNGKMAVYSGDDETAWELMLLGADGNISVTANIAPKAMSEVCAVAIAKDEQQAKTLNNKIANLHNIL-- 243 (291)
T ss_dssp HHHHHHHHHH-HTTSSEEEECCHHHHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHT--
T ss_pred HHHHHHHHHH-cCCCeEEEECcHHHHHHHHHCCCCEEEechhhhcHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 9999999873 5689999999999999999999999999999999999999999999999999999999999998776
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.+.+|+|+. +++++++++|+++|+++|++
T Consensus 244 ---~~~~~~~~~K~al~~~G~~~~~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 291 (291)
T 3tak_A 244 ---FCESNPIPVKWALHEMGLIDTGIRLPLT-PLAEQYREPLRNALKDAGII 291 (291)
T ss_dssp ---TSSSTTHHHHHHHHHTTSSCSCCCTTSC-SCCGGGHHHHHHHHHHTTCC
T ss_pred ---hccCChHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 4556788899999999998666999999 99999999999999999874
No 7
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.9e-51 Score=433.44 Aligned_cols=251 Identities=25% Similarity=0.384 Sum_probs=235.0
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 36 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 87 (294)
T 2ehh_A 36 DAILVCGTTGESPTLTFEEHEKVIEF---AVK-------------------------RAAGRIKVIAGTGGNATHEAVHL 87 (294)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSEEEEECCCSCHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCCCHHHHHHH
Confidence 46666 889999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-hCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-eiPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+ ++|||+||||+
T Consensus 88 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKds~g 165 (294)
T 2ehh_A 88 TAHAKEVGADGALVVVPYYNKPT--QRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECENIVASKESTP 165 (294)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCCEEEEEeCCC
Confidence 99999999999999999999987 99999999999999999999999999999999999999999 89999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++. .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 166 d~~~~~~~~~~-~~~~f~v~~G~d~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 243 (294)
T 2ehh_A 166 NMDRISEIVKR-LGESFSVLSGDDSLTLPMMALGAKGVISVANNVMPREVKELIRAALEGDFRRAREIHYYLHDLFKVL- 243 (294)
T ss_dssp CHHHHHHHHHH-HCTTSEEEESSGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHh-cCCCeEEEECcHHHHHHHHHCCCCEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 99999999873 4678999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++++.
T Consensus 244 ----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~~ 292 (294)
T 2ehh_A 244 ----FIETNPIPVKTACWMLGMCEKEFRLPLT-EMSPENENKLREVLKKYNLPL 292 (294)
T ss_dssp ----TSSSTTHHHHHHHHHTTSSCSCCCTTCC-CCCHHHHHHHHHHHHHTTCCC
T ss_pred ----hcCCCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHhCccc
Confidence 4455688899999999998899999999 999999999999999998754
No 8
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=9.5e-52 Score=437.46 Aligned_cols=243 Identities=26% Similarity=0.382 Sum_probs=230.2
Q ss_pred cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHHHHHHHHcC
Q psy11975 461 AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDLTQKAAKAG 540 (786)
Q Consensus 461 agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIELAr~Ae~aG 540 (786)
+||+.+||.+||++|++. |++ +++||+|||+|||+++++++++++++|+++|
T Consensus 48 tGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 48 TGEFAYLGTAQREAVVRA---TIE-------------------------AAQRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp GGTGGGCCHHHHHHHHHH---HHH-------------------------HHTTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred ccCccccCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 789999999999999999 654 4678999999999999999999999999999
Q ss_pred CCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--CHHHHHHHH
Q psy11975 541 ANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--DNIKLANMA 618 (786)
Q Consensus 541 ADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--Dl~ri~~ll 618 (786)
||++|++||||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |+.++.+++
T Consensus 100 adavlv~~P~y~~~~--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd~~~~~~~~ 177 (300)
T 3eb2_A 100 ADGILAILEAYFPLK--DAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPRIRYIKDASTNTGRLLSII 177 (300)
T ss_dssp CSEEEEEECCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTTEEEEEECSSBHHHHHHHH
T ss_pred CCEEEEcCCCCCCCC--HHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCCEEEEEcCCCCHHHHHHHH
Confidence 999999999999987 9999999999999999999999999999999999999999999999999999 999999988
Q ss_pred hhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHhhhhccccC
Q psy11975 619 NQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRNVLLMKEMG 698 (786)
Q Consensus 619 ~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~~~~~~~~~ 698 (786)
+. .+++|.||+|.|.+++++|.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+ ....+
T Consensus 178 ~~-~~~~f~v~~G~d~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-----~~~~~ 251 (300)
T 3eb2_A 178 NR-CGDALQVFSASAHIPAAVMLIGGVGWMAGPACIAPRQSVALYELCKAQRWDEALMLQRKLWRVNEAF-----AKFNL 251 (300)
T ss_dssp HH-HGGGSEEEECTTSCHHHHHHTTCCEEEEGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHH-----TTSCH
T ss_pred HH-cCCCeEEEeCcHHHHHHHHhCCCCEEEeChhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-----HcCCC
Confidence 73 4678999999999999999999999999999999999999999999999999999999999999877 45567
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q psy11975 699 VPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAG 740 (786)
Q Consensus 699 ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lG 740 (786)
+..+|++|+++|++.|.+|+|+. +|+++++++|+++|++++
T Consensus 252 ~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~ 292 (300)
T 3eb2_A 252 AACIKAGLALQGYDVGDPIPPQA-ALTAEERKAVEKVLAEIA 292 (300)
T ss_dssp HHHHHHHHHHTTCCCCCCCTTSC-CCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHHh
Confidence 89999999999999999999999 999999999999999874
No 9
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.3e-51 Score=439.37 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=233.9
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||+++|++++++
T Consensus 60 ~Gi~v~GtTGE~~~Ls~~Er~~v~~~---~v~-------------------------~~~grvpViaGvg~~~t~~ai~l 111 (315)
T 3na8_A 60 HAIAPLGSTGEGAYLSDPEWDEVVDF---TLK-------------------------TVAHRVPTIVSVSDLTTAKTVRR 111 (315)
T ss_dssp SEEECSSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCBEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCCCHHHHHHH
Confidence 46665 789999999999999999 654 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHH-HhCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKL-AHHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rL-AeiPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+| +++|||+||||+
T Consensus 112 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pnIvgiKdssg 189 (315)
T 3na8_A 112 AQFAESLGAEAVMVLPISYWKLN--EAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDNVTMVKESTG 189 (315)
T ss_dssp HHHHHHTTCSEEEECCCCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTTEEEEEECSS
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCCEEEEECCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999 799999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++ ..+++|.||+|.|.+++++|.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 190 d~~~~~~~~~-~~~~~f~v~~G~D~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 267 (315)
T 3na8_A 190 DIQRMHKLRL-LGEGRVPFYNGCNPLALEAFVAGAKGWCSAAPNLIPTLNGQLYQAVLDGDLEKARALFYRQLPLLDFI- 267 (315)
T ss_dssp CHHHHHHHHH-HTTTCSCEEECCGGGHHHHHHHTCSEEEESGGGTCHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHH-HcCCCEEEEeCchHHHHHHHHCCCCEEEechhhhCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH-
Confidence 9999999987 45678999999999999999999999999999999999999999999999999999999999999877
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGF 741 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGl 741 (786)
....++..+|++|+++|++.|.+|+|+. +|+++++++|+++|+++|.
T Consensus 268 ----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~g~ 314 (315)
T 3na8_A 268 ----LRRGLPTTIKAGLGLSGLEVGAPRLPVQ-ALDTEGCRYLQGLLEELRG 314 (315)
T ss_dssp ----HHHCHHHHHHHHHHHTTCCCCCCCTTSC-CCCHHHHHHHHHHHHHHC-
T ss_pred ----HccCcHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHhcC
Confidence 3455688999999999999999999999 9999999999999999874
No 10
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=100.00 E-value=2e-51 Score=434.99 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=235.3
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCC-CCeEEEeCCCCCHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREW-QADLLKPQKHTTTRATID 531 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaG-RVPVIaGVGa~ST~EAIE 531 (786)
.|++. +||+.+||.+||++|++. |++ +++| |+|||+|+|+++|+++++
T Consensus 43 ~gl~v~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~g~rvpviaGvg~~~t~~ai~ 94 (301)
T 3m5v_A 43 DAVVPVGTTGESATLTHEEHRTCIEI---AVE-------------------------TCKGTKVKVLAGAGSNATHEAVG 94 (301)
T ss_dssp CEEECSSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEEECCCSSHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCCeEEEeCCCCCHHHHHH
Confidence 46665 899999999999999999 654 5678 999999999999999999
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEEEEeC-
Q psy11975 532 LTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRGVKDT- 609 (786)
Q Consensus 532 LAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVGIKDS- 609 (786)
++++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++ |||+||||+
T Consensus 95 la~~a~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdss 172 (301)
T 3m5v_A 95 LAKFAKEHGADGILSVAPYYNKPT--QQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEAS 172 (301)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECS
T ss_pred HHHHHHHcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCC
Confidence 999999999999999999999987 9999999999999999999999999999999999999999987 999999999
Q ss_pred -CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHH
Q psy11975 610 -DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTV 688 (786)
Q Consensus 610 -Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l 688 (786)
|+.++.++++. . ++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 173 gd~~~~~~~~~~-~-~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~ 250 (301)
T 3m5v_A 173 GNIDKCVDLLAH-E-PRMMLISGEDAINYPILSNGGKGVISVTSNLLPDMISALTHFALDENYKEAKKINDELYNINKIL 250 (301)
T ss_dssp SCHHHHHHHHHH-C-TTSEEEECCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHT
T ss_pred CCHHHHHHHHHh-C-CCeEEEEccHHHHHHHHHcCCCEEEehHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999884 4 89999999999999999999999999999999999999999999999999999999999999876
Q ss_pred HhhhhccccCHHHHHHHHHHcCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 689 RNVLLMKEMGVPGVRAAMELYGYY-GGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 689 ~~~~~~~~~~ia~lKaaL~lrGI~-~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++ .+.+|+|+. +++++++++|+++|+++|++
T Consensus 251 -----~~~~~~~~~K~al~~~G~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~l~ 299 (301)
T 3m5v_A 251 -----FCESNPIPIKTAMYLAGLIESLEFRLPLC-SPSKENFAKIEEVMKKYKIK 299 (301)
T ss_dssp -----TSSSTTHHHHHHHHHTTSSSCCCCCTTCC-CCCHHHHHHHHHHHTTSCCC
T ss_pred -----hccCCHHHHHHHHHHCCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHCcCc
Confidence 4556788999999999998 899999999 99999999999999999886
No 11
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=100.00 E-value=1.5e-51 Score=436.99 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=234.4
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||++++++++++
T Consensus 51 ~gi~v~GttGE~~~Lt~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 102 (304)
T 3l21_A 51 DGLVVSGTTGESPTTTDGEKIELLRA---VLE-------------------------AVGDRARVIAGAGTYDTAHSIRL 102 (304)
T ss_dssp SEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTTSEEEEECCCSCHHHHHHH
T ss_pred CEEEeCccccchhhCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEEeCCCCCHHHHHHH
Confidence 46666 899999999999999999 654 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||+|||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 103 a~~a~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd 180 (304)
T 3l21_A 103 AKACAAEGAHGLLVVTPYYSKPP--QRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPNIVGVXDAKAD 180 (304)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECSCC
T ss_pred HHHHHHcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEECCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.+++. +++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 181 ~~~~~~~~~---~~~f~v~~G~d~~~l~~l~~Ga~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 255 (304)
T 3l21_A 181 LHSGAQIMA---DTGLAYYSGDDALNLPWLRMGATGFISVIAHLAAGQLRELLSAFGSGDIATARKINIAVAPLCNAM-- 255 (304)
T ss_dssp HHHHHHHHH---HHCCEEEESSGGGHHHHHHHTCCEEEESTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHH--
T ss_pred HHHHHHHhc---CCCeEEEeCchHHHHHHHHcCCCEEEecHHhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH--
Confidence 999998874 368999999999999999999999999999999999999999999999999999999999999877
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|+++++++
T Consensus 256 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~l~~ 304 (304)
T 3l21_A 256 ---SRLGGVTLSKAGLRLQGIDVGDPRLPQV-AATPEQIDALAADMRAASVLR 304 (304)
T ss_dssp ---HHHHHHHHHHHHHHHTTCCCCCCCTTSC-CCCHHHHHHHHHHHHHTTSCC
T ss_pred ---HccCCHHHHHHHHHhcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHcCCCC
Confidence 3445789999999999999999999999 999999999999999998863
No 12
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=100.00 E-value=1.5e-51 Score=433.82 Aligned_cols=250 Identities=23% Similarity=0.340 Sum_probs=232.9
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 37 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pvi~Gvg~~~t~~ai~l 88 (291)
T 3a5f_A 37 DAIIVCGTTGEATTMTETERKETIKF---VID-------------------------KVNKRIPVIAGTGSNNTAASIAM 88 (291)
T ss_dssp CEEEESSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCcccHHHHHHH
Confidence 46666 789999999999999999 654 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++|||+||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 89 a~~a~~~Gadavlv~~P~y~~~s--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s~gd 166 (291)
T 3a5f_A 89 SKWAESIGVDGLLVITPYYNKTT--QKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKNIVAVXEASGN 166 (291)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCC
T ss_pred HHHHHhcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEeCCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++. .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 167 ~~~~~~~~~~-~~~~f~v~~G~d~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 243 (291)
T 3a5f_A 167 ISQIAQIKAL-CGDKLDIYSGNDDQIIPILALGGIGVISVLANVIPEDVHNMCELYLNGKVNEALKIQLDSLALTNAL-- 243 (291)
T ss_dssp HHHHHHHHHH-HGGGSEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHHHT--
T ss_pred HHHHHHHHHh-cCCCeEEEeCcHHHHHHHHHCCCCEEEecHHHhcHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 9999998873 4568999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.+.+|+|+. +++++++++|+++|++++++
T Consensus 244 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 291 (291)
T 3a5f_A 244 ---FIETNPIPVKTAMNLMNMKVGDLRLPLC-EMNENNLEILKKELKAYNLM 291 (291)
T ss_dssp ---TSSSTTHHHHHHHHHTTCCCCCCCTTCC-CCCHHHHHHHHHHHHHTTCC
T ss_pred ---hcCCCHHHHHHHHHHhCCCCCCcCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 4455688899999999998899999999 99999999999999998763
No 13
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=100.00 E-value=3.4e-51 Score=433.39 Aligned_cols=248 Identities=27% Similarity=0.471 Sum_probs=232.7
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 48 ~gl~v~GtTGE~~~Ls~eEr~~v~~~---~~~-------------------------~~~grvpViaGvg~~~t~~ai~l 99 (301)
T 1xky_A 48 TAIVVGGTTGESPTLTSEEKVALYRH---VVS-------------------------VVDKRVPVIAGTGSNNTHASIDL 99 (301)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSCHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCceEEeCCCCCCHHHHHHH
Confidence 46666 889999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 100 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd 177 (301)
T 1xky_A 100 TKKATEVGVDAVMLVAPYYNKPS--QEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIENIVAIKDAGGD 177 (301)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECSSC
T ss_pred HHHHHhcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCCEEEEEcCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++. .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 178 ~~~~~~~~~~-~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 254 (301)
T 1xky_A 178 VLTMTEIIEK-TADDFAVYSGDDGLTLPAMAVGAKGIVSVASHVIGNEMQEMIAAFQAGEFKKAQKLHQLLVRVTDSL-- 254 (301)
T ss_dssp HHHHHHHHHH-SCTTCEEEESSGGGHHHHHHTTCCEEEESTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHh-cCCCeEEEECcHHHHHHHHHcCCCEEEcCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 9999999873 5678999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAG 740 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lG 740 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++
T Consensus 255 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~ 300 (301)
T 1xky_A 255 ---FMAPSPTPVKTALQMVGLDVGSVRLPLL-PLTEEERVTLQSVMQSIP 300 (301)
T ss_dssp ---TSSSTTHHHHHHHHHTTCCCCCCCTTSC-CCCHHHHHHHHHHHHTSC
T ss_pred ---hcCCCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHhcc
Confidence 4455688999999999999899999999 999999999999998765
No 14
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=100.00 E-value=1.8e-51 Score=433.42 Aligned_cols=250 Identities=22% Similarity=0.349 Sum_probs=233.3
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 37 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pviaGvg~~~t~~ai~l 88 (292)
T 2ojp_A 37 SAIVSVGTTGESATLNHDEHADVVMM---TLD-------------------------LADGRIPVIAGTGANATAEAISL 88 (292)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSSHHHHHHH
T ss_pred CEEEECccccchhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCccHHHHHHH
Confidence 46665 889999999999999999 654 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++|||+||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 89 a~~a~~~Gadavlv~~P~y~~~s--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~s~gd 166 (292)
T 2ojp_A 89 TQRFNDSGIVGCLTVTPYYNRPS--QEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIXEATGN 166 (292)
T ss_dssp HHHTTTSSCSEEEEECCCSSCCC--HHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTSTTEEEC-CCSCC
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcCCCEEEEeCCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++ ..+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 167 ~~~~~~~~~-~~~~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 243 (292)
T 2ojp_A 167 LTRVNQIKE-LVSDDFVLLSGDDASALDFMQYGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINERLMPLHNKL-- 243 (292)
T ss_dssp THHHHHHHT-TSCTTSBCEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHH-hcCCCEEEEECcHHHHHHHHHCCCcEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 999999987 35678999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhccccCHHHHHHHHHHcCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYG-GRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~-G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++. +.+|+|+. +++++++++|+++|++++++
T Consensus 244 ---~~~~~~~~~K~al~~~G~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 292 (292)
T 2ojp_A 244 ---FVEPNPIPVKWACKELGLVATDTLRLPMT-PITDSGRETVRAALKHAGLL 292 (292)
T ss_dssp ---TSSSTTHHHHHHHHHTTSSSCCCCCTTSC-CCCHHHHHHHHHHHHHTTCC
T ss_pred ---hcCCCHHHHHHHHHHcCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 44557889999999999987 99999999 99999999999999998763
No 15
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=100.00 E-value=5.5e-51 Score=432.34 Aligned_cols=248 Identities=24% Similarity=0.348 Sum_probs=232.4
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ .++||+|||+|||+++|++++++
T Consensus 52 ~gl~v~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~st~~ai~l 103 (304)
T 3cpr_A 52 DSLVLAGTTGESPTTTAAEKLELLKA---VRE-------------------------EVGDRAKLIAGVGTNNTRTSVEL 103 (304)
T ss_dssp CEEEESSTTTTTTTSCHHHHHHHHHH---HHH-------------------------HHTTTSEEEEECCCSCHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEecCCCCCHHHHHHH
Confidence 46666 789999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 104 a~~A~~~Gadavlv~~P~y~~~~--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssgd 181 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTPYYSKPS--QEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSELPTILAVXDAKGD 181 (304)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTTEEEEEECSCC
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEecCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++. . +|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 182 ~~~~~~~~~~-~--~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 256 (304)
T 3cpr_A 182 LVAATSLIKE-T--GLAWYSGDDPLNLVWLALGGSGFISVIGHAAPTALRELYTSFEEGDLVRAREINAKLSPLVAAQ-- 256 (304)
T ss_dssp HHHHHHHHHH-H--CCEEEECSGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHH--
T ss_pred HHHHHHHHHh-c--CEEEEECcHHHHHHHHHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 9999999874 3 8999999999999999999999999999999999999999999999999999999999998766
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++++
T Consensus 257 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 304 (304)
T 3cpr_A 257 ---GRLGGVSLAKAALRLQGINVGDPRLPIM-APNEQELEALREDMKKAGVL 304 (304)
T ss_dssp ---HHHCHHHHHHHHHHHTTCCCCCCCTTSC-CCCHHHHHHHHHHHHHTTCC
T ss_pred ---hcCCCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 3345688899999999999899999999 99999999999999998763
No 16
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.4e-51 Score=430.38 Aligned_cols=250 Identities=24% Similarity=0.389 Sum_probs=234.0
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 36 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pviaGvg~~~t~~ai~l 87 (292)
T 2vc6_A 36 FGLVPCGTTGESPTLSKSEHEQVVEI---TIK-------------------------TANGRVPVIAGAGSNSTAEAIAF 87 (292)
T ss_dssp SEEETTSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCBEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCccHHHHHHH
Confidence 35555 789999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHh-CCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAH-HENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAe-iPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++|||+||+|++||++|+++++.+|++ +|||+||||+
T Consensus 88 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiK~s~g 165 (292)
T 2vc6_A 88 VRHAQNAGADGVLIVSPYYNKPT--QEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGVXDATG 165 (292)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSC
T ss_pred HHHHHHcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCCEEEEecCCC
Confidence 99999999999999999999987 999999999999999999999999999999999999999998 9999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++ ..+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 166 d~~~~~~~~~-~~~~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 243 (292)
T 2vc6_A 166 NLLRPSLERM-ACGEDFNLLTGEDGTALGYMAHGGHGCISVTANVAPALCADFQQACLNGDFAAALKLQDRLMPLHRAL- 243 (292)
T ss_dssp CTHHHHHHHH-HSCTTSEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHH-HcCCCEEEEECchHHHHHHHHcCCCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 9999999987 35679999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++++
T Consensus 244 ----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 291 (292)
T 2vc6_A 244 ----FLETNPAGAKYALQRLGRMRGDLRLPLV-TISPSFQEEIDDAMRHAGIL 291 (292)
T ss_dssp ----TSSSTTHHHHHHHHHTTSSCCCCCTTCC-CCCHHHHHHHHHHHHHTTSC
T ss_pred ----hcCCCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHhcCcc
Confidence 4455788999999999998899999999 99999999999999998864
No 17
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=100.00 E-value=5.1e-51 Score=429.32 Aligned_cols=248 Identities=21% Similarity=0.359 Sum_probs=232.5
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 36 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pviaGvg~~~t~~ai~l 87 (289)
T 2yxg_A 36 SGIVAVGTTGESPTLSHEEHKKVIEK---VVD-------------------------VVNGRVQVIAGAGSNCTEEAIEL 87 (289)
T ss_dssp SEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSEEEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCCCHHHHHHH
Confidence 46666 889999999999999999 553 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-hCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-eiPNVVGIKDS-- 609 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++|||+||+|++||++|+++++.+|+ ++|||+||||+
T Consensus 88 a~~a~~~Gadavlv~~P~y~~~s--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiK~s~g 165 (289)
T 2yxg_A 88 SVFAEDVGADAVLSITPYYNKPT--QEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSNISAVKEANP 165 (289)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEeCCC
Confidence 99999999999999999999987 99999999999999999999999999999999999999999 89999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++. . +|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 166 d~~~~~~~~~~-~--~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 241 (289)
T 2yxg_A 166 NLSQVSELIHD-A--KITVLSGNDELTLPIIALGGKGVISVVANIVPKEFVEMVNYALEGDFEKAREIHYKLFPLMKAM- 241 (289)
T ss_dssp CTHHHHHHHHH-T--CSEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-
T ss_pred CHHHHHHHHHh-C--CeEEEECcHHHHHHHHHCCCCEEEeChhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 99999999873 3 8999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++++
T Consensus 242 ----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 289 (289)
T 2yxg_A 242 ----FIETNPIPVKTALNMMGRPAGELRLPLC-EMSEEHKKILENVLKDLGLI 289 (289)
T ss_dssp ----TSSSTTHHHHHHHHHTTCSCCCCCTTCC-CCCHHHHHHHHHHHHHHTCC
T ss_pred ----hcCCCHHHHHHHHHHcCCCCCCCCCCCC-CCCHHHHHHHHHHHHHcCCC
Confidence 4455688899999999998899999999 99999999999999998763
No 18
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=100.00 E-value=3.3e-51 Score=434.40 Aligned_cols=250 Identities=22% Similarity=0.357 Sum_probs=233.2
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 48 ~gl~v~GtTGE~~~Ls~eEr~~vi~~---~~~-------------------------~~~grvpViaGvg~~st~~ai~l 99 (306)
T 1o5k_A 48 NALIVLGTTGESPTVNEDEREKLVSR---TLE-------------------------IVDGKIPVIVGAGTNSTEKTLKL 99 (306)
T ss_dssp CEEEESSGGGTGGGCCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSCHHHHHHH
T ss_pred CEEEeCccccchhhCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEEcCCCccHHHHHHH
Confidence 46666 889999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-hCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-eiPNVVGIKDS-- 609 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+ ++|||+||||+
T Consensus 100 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKdssg 177 (306)
T 1o5k_A 100 VKQAEKLGANGVLVVTPYYNKPT--QEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKNVVGIXEANP 177 (306)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECCC
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEeCCCC
Confidence 99999999999999999999987 99999999999999999999999999999999999999999 89999999999
Q ss_pred CHHHHHHHHhhcCCC---CEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHH
Q psy11975 610 DNIKLANMANQTKDL---NFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDV 686 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~---df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~ 686 (786)
|+.++.++++. .++ +|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++
T Consensus 178 d~~~~~~~~~~-~~~~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~ 256 (306)
T 1o5k_A 178 DIDQIDRTVSL-TKQARSDFMVWSGNDDRTFYLLCAGGDGVISVVSNVAPKQMVELCAEYFSGNLEKSREVHRKLRPLMK 256 (306)
T ss_dssp CHHHHHHHHHH-HHHHCTTCEEEESSGGGHHHHHHHTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHh-cCCCCCcEEEEECcHHHHHHHHHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999998863 334 89999999999999999999999999999999999999999999999999999999999987
Q ss_pred HHHhhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 687 TVRNVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 687 ~l~~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
.+ ....++..+|++|+++|++.+.+|+|+. +++++++++|+++|++++++
T Consensus 257 ~~-----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 306 (306)
T 1o5k_A 257 AL-----FVETNPIPVKAALNLMGFIENELRLPLV-PASEKTVELLRNVLKESGLL 306 (306)
T ss_dssp HT-----TSSSTTHHHHHHHHHTTSSCCCCCTTCC-CCCHHHHHHHHHHHHHTTCC
T ss_pred HH-----hcCCCHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHhcCCC
Confidence 65 4455788999999999998899999999 99999999999999998763
No 19
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=5.2e-51 Score=437.83 Aligned_cols=253 Identities=21% Similarity=0.217 Sum_probs=232.4
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||+++|++++++
T Consensus 70 ~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~ve-------------------------~~~grvpViaGvg~~st~eai~l 121 (332)
T 2r8w_A 70 DSVGILGSTGIYMYLTREERRRAIEA---AAT-------------------------ILRGRRTLMAGIGALRTDEAVAL 121 (332)
T ss_dssp SEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSEEEEEECCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCCCHHHHHHH
Confidence 36665 789999999999999999 554 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++||||+|++||||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 122 a~~A~~~Gadavlv~~P~Y~~~s--~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pnIvgiKdssgd 199 (332)
T 2r8w_A 122 AKDAEAAGADALLLAPVSYTPLT--QEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPNIRAIKMPLPA 199 (332)
T ss_dssp HHHHHHHTCSEEEECCCCSSCCC--HHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTTEEEEEECCCT
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCCEEEEEeCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 8
Q ss_pred ----HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHH
Q psy11975 611 ----NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDV 686 (786)
Q Consensus 611 ----l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~ 686 (786)
+.++.++++ ..+++|.||+|.|.++++++..|++|+|++++|++|+++++||+++++||+++|+++|+++.++++
T Consensus 200 ~~~~~~~~~~l~~-~~~~~f~v~~G~D~~~l~~l~~G~~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~ 278 (332)
T 2r8w_A 200 DADYAGELARLRP-KLSDDFAIGYSGDWGCTDATLAGGDTWYSVVAGLLPVPALQLMRAAQAGNAEEAKRLDATFQPLWA 278 (332)
T ss_dssp TCCHHHHHHHHTT-TSCTTCEEEECCHHHHHHHHHTTCSEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHTHHHHH
T ss_pred chhHHHHHHHHHH-hcCCCEEEEeCchHHHHHHHHCCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 999999886 456789999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHHhhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCCcc
Q psy11975 687 TVRNVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLVPG 745 (786)
Q Consensus 687 ~l~~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~~~ 745 (786)
.+ ....++..+|++|+++|++.|.+|+|+. +++++++++|+++|+++++++.+
T Consensus 279 ~~-----~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~e~~ 331 (332)
T 2r8w_A 279 LF-----KEFGSIRVIYAAANILSLTVSEPPRPIL-PLTSAERQRVEEALEALSALETA 331 (332)
T ss_dssp HH-----HHHCHHHHHHHHHHHTTSCCCCCCTTSC-CCCHHHHHHHHHHHHHHC-----
T ss_pred HH-----HhcCCHHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHHhcchhhcC
Confidence 65 2223588999999999998899999999 99999999999999999887754
No 20
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=100.00 E-value=7.1e-51 Score=433.13 Aligned_cols=251 Identities=22% Similarity=0.393 Sum_probs=236.1
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|+|++++++++++
T Consensus 43 ~Gl~v~GtTGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpViaGvg~~~t~~ai~l 94 (311)
T 3h5d_A 43 DGILLAGTTAESPTLTHDEELELFAA---VQK-------------------------VVNGRVPLIAGVGTNDTRDSIEF 94 (311)
T ss_dssp CCEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HSCSSSCEEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCcCHHHHHHH
Confidence 35555 899999999999999999 654 45689999999999999999999
Q ss_pred HHHHHHcCC-CEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC-C
Q psy11975 533 TQKAAKAGA-NAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-D 610 (786)
Q Consensus 533 Ar~Ae~aGA-DAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-D 610 (786)
+++|+++|+ |++|+++|||++++ ++++++||++||+++++||+|||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 95 a~~A~~~Ga~davlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiKdssd 172 (311)
T 3h5d_A 95 VKEVAEFGGFAAGLAIVPYYNKPS--QEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPNIIGVKECTS 172 (311)
T ss_dssp HHHHHHSCCCSEEEEECCCSSCCC--HHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTTEEEEEECSC
T ss_pred HHHHHhcCCCcEEEEcCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeCCC
Confidence 999999997 99999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++ ..+++|.||+|.|.+++++|.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 173 ~~~~~~~~~-~~~~~f~v~~G~d~~~l~~l~~Ga~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 249 (311)
T 3h5d_A 173 LANMAYLIE-HKPEEFLIYTGEDGDAFHAMNLGADGVISVASHTNGDEMHEMFTAIAESDMKKAAAIQRKFIPKVNAL-- 249 (311)
T ss_dssp HHHHHHHHH-HCCSSCEEEECCGGGHHHHHHHTCCEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHH-HcCCCEEEEECcHHHHHHHHHcCCCEEEechhhhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 999999887 45678999999999999999999999999999999999999999999999999999999999999877
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
....++..+|++|+++|++.|.+|+|+. +|+++++++|+++|+++++..
T Consensus 250 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~~ 298 (311)
T 3h5d_A 250 ---FSYPSPAPVKAILNYMGFEAGPTRLPLV-PAPEEDVKRIIKVVVDGDYEA 298 (311)
T ss_dssp ---TSSSTTHHHHHHHHHHTSCCCCCCTTCC-CCCHHHHHHHHHHHSCCCCCC
T ss_pred ---HccCCHHHHHHHHHHCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHccchh
Confidence 4556788899999999999899999999 999999999999999998865
No 21
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=100.00 E-value=1.1e-50 Score=427.60 Aligned_cols=246 Identities=19% Similarity=0.300 Sum_probs=230.4
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 40 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 91 (293)
T 1f6k_A 40 DGLYVGGSTGENFMLSTEEKKEIFRI---AKD-------------------------EAKDQIALIAQVGSVNLKEAVEL 91 (293)
T ss_dssp SEEEESSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSEEEEECCCSCHHHHHHH
T ss_pred cEEEeCccccchhhCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEEecCCCCHHHHHHH
Confidence 46665 789999999999999999 554 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 92 a~~a~~~Gadavlv~~P~y~~~~--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s~gd 169 (293)
T 1f6k_A 92 GKYATELGYDCLSAVTPFYYKFS--FPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFTAGD 169 (293)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEECSCC
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCCEEEEEECCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 611 NIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 611 l~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
+.++.++++. .++|.||+|.|+++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 170 ~~~~~~~~~~--~~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~-- 245 (293)
T 1f6k_A 170 FYLLERLKKA--YPNHLIWAGFDEMMLPAASLGVDGAIGSTFNVNGVRARQIFELTKAGKLKEALEIQHVTNDLIEGI-- 245 (293)
T ss_dssp HHHHHHHHHH--CTTSEEEECCGGGHHHHHHTTCSEEEESTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHh--CCCeEEEECcHHHHHHHHHCCCcEEEeCHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH--
Confidence 9999999873 468999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHc
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPL-PAALKPGGAEKIKQVLTEA 739 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL-~~pLseeekaeL~~~L~~l 739 (786)
....++..+|++|+++|++.|.+|+|+ . +++++++++|+++|+++
T Consensus 246 ---~~~~~~~~~K~al~~~G~~~g~~R~Pl~~-~l~~~~~~~l~~~l~~~ 291 (293)
T 1f6k_A 246 ---LANGLYLTIKELLKLEGVDAGYCREPMTS-KATAEQVAKAKDLKAKF 291 (293)
T ss_dssp ---HHHCHHHHHHHHHHHTTCCCBCCCTTSCC-SCCHHHHHHHHHHHHHH
T ss_pred ---hcCCCHHHHHHHHHHcCCCCCCcCCCCCC-CCCHHHHHHHHHHHHHh
Confidence 233458899999999999989999999 9 99999999999999875
No 22
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=100.00 E-value=1.7e-50 Score=428.41 Aligned_cols=246 Identities=17% Similarity=0.310 Sum_probs=230.4
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 47 ~Gl~v~GtTGE~~~Ls~eEr~~v~~~---~~~-------------------------~~~grvpViaGvg~~~t~~ai~l 98 (303)
T 2wkj_A 47 DGLYVGGSTGEAFVQSLSEREQVLEI---VAE-------------------------EAKGKIKLIAHVGCVSTAESQQL 98 (303)
T ss_dssp SEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTTSEEEEECCCSSHHHHHHH
T ss_pred CEEEECeeccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCCCHHHHHHH
Confidence 46666 889999999999999999 654 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSP-IPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtd-LPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++++ ++++++||++||++++ +||||||+|++||++|+++++.+|+++|||+||||+
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pnIvgiK~s~g 176 (303)
T 2wkj_A 99 AASAKRYGFDAVSAVTPFYYPFS--FEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPGVGALXQTSG 176 (303)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTTEEEEEECCC
T ss_pred HHHHHhCCCCEEEecCCCCCCCC--HHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEeCCCC
Confidence 99999999999999999999987 9999999999999998 999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++. .++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.+++..+
T Consensus 177 d~~~~~~~~~~--~~~f~v~~G~d~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 253 (303)
T 2wkj_A 177 DLYQMEQIRRE--HPDLVLYNGYDNIFASGLLAGADGGIGSTYNIMGWRYQGIVKALKEGDIQTAQKLQTECNKVIDLL- 253 (303)
T ss_dssp CHHHHHHHHHH--CTTCEEEECCGGGHHHHHHHTCCEEEETTHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHHh--CCCeEEEeCcHHHHHHHHHCCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 99999999873 569999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHc
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGG-RSRRPLPAALKPGGAEKIKQVLTEA 739 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G-~vR~PL~~pLseeekaeL~~~L~~l 739 (786)
....++..+|++|+++|++.| .+|+|+. +++++++++|+++|+++
T Consensus 254 ----~~~~~~~~~K~al~~~G~~~g~~~R~Pl~-~l~~~~~~~l~~~l~~~ 299 (303)
T 2wkj_A 254 ----IKTGVFRGLKTVLHYMDVVSVPLCRKPFG-PVDEKYLPELKALAQQL 299 (303)
T ss_dssp ----HHHCHHHHHHHHHHHTTSCSSCCCCTTSC-CCCGGGHHHHHHHHHHH
T ss_pred ----hccCCHHHHHHHHHHcCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHH
Confidence 334468899999999999888 9999999 99999999999999875
No 23
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=100.00 E-value=2.5e-50 Score=434.35 Aligned_cols=251 Identities=24% Similarity=0.338 Sum_probs=233.0
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||+++|++++++
T Consensus 67 ~Gl~v~GtTGE~~~Ls~eEr~~vi~~---~ve-------------------------~~~grvpViaGvg~~st~eai~l 118 (343)
T 2v9d_A 67 DGLFFLGSGGEFSQLGAEERKAIARF---AID-------------------------HVDRRVPVLIGTGGTNARETIEL 118 (343)
T ss_dssp SCEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCSSCHHHHHHH
T ss_pred CEEEeCccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCCCHHHHHHH
Confidence 35555 789999999999999999 654 46689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-hCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-eiPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++||||||+|++||++|+++++.+|+ ++|||+||||+
T Consensus 119 a~~A~~~Gadavlv~~P~Y~~~s--~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pnIvgiKdssg 196 (343)
T 2v9d_A 119 SQHAQQAGADGIVVINPYYWKVS--EANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSNIIGIKDTID 196 (343)
T ss_dssp HHHHHHHTCSEEEEECCSSSCCC--HHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTTEEEEEECCS
T ss_pred HHHHHhcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCCEEEEEeCCC
Confidence 99999999999999999999987 99999999999999999999999999999999999999999 89999999999
Q ss_pred CHHHHHHHHhhcCC---CCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHH
Q psy11975 610 DNIKLANMANQTKD---LNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDV 686 (786)
Q Consensus 610 Dl~ri~~ll~~~~~---~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~ 686 (786)
|+.++.++++. .+ ++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++
T Consensus 197 d~~~~~~l~~~-~~~~~~~f~v~~G~D~~~l~~l~~Ga~G~is~~anv~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~ 275 (343)
T 2v9d_A 197 SVAHLRSMIHT-VKGAHPHFTVLCGYDDHLFNTLLLGGDGAISASGNFAPQVSVNLLKAWRDGDVAKAAGYHQTLLQIPQ 275 (343)
T ss_dssp CHHHHHHHHHH-HHHHCTTCEEEESSGGGHHHHHHTTCCEECCGGGTTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHGGG
T ss_pred CHHHHHHHHHh-cCCCCCCEEEEECcHHHHHHHHHCCCCEEEeCHHHhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 99999998873 33 689999999999999999999999999999999999999999999999999999999999986
Q ss_pred HHHhhhhccccC-HHHHHHHHHHcCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 687 TVRNVLLMKEMG-VPGVRAAMELYGYYG-GRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 687 ~l~~~~~~~~~~-ia~lKaaL~lrGI~~-G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
.+ ....+ +..+|++|+++|++. +.+|+|+. +++++++++|+++|++++++.
T Consensus 276 ~~-----~~~~~~~~~iK~al~~~G~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~~ 328 (343)
T 2v9d_A 276 MY-----QLDTPFVNVIKEAIVLCGRPVSTHVLPPAS-PLDEPRKAQLKTLLQQLKLCC 328 (343)
T ss_dssp GG-----GGSSSCHHHHHHHHHHTTCCCCCCCCTTSC-CCCHHHHHHHHHHHHHTTCC-
T ss_pred HH-----HhcCChHHHHHHHHHHCCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHhCccc
Confidence 65 34445 899999999999987 99999999 999999999999999998754
No 24
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=100.00 E-value=1.3e-50 Score=427.00 Aligned_cols=246 Identities=20% Similarity=0.323 Sum_probs=229.9
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|++++++++++
T Consensus 38 ~gl~v~GttGE~~~Lt~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 89 (292)
T 3daq_A 38 QAIIVNGTTAESPTLTTDEKELILKT---VID-------------------------LVDKRVPVIAGTGTNDTEKSIQA 89 (292)
T ss_dssp CEEEESSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSCHHHHHHH
T ss_pred CEEEECccccccccCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCcccHHHHHHH
Confidence 46666 899999999999999999 654 45789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|+++|||++++ ++++++||++||+++++|||+||+|++||++|+++++.+|+++|||+||||+ |
T Consensus 90 a~~a~~~Gadavlv~~P~y~~~~--~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiK~ssgd 167 (292)
T 3daq_A 90 SIQAKALGADAIMLITPYYNKTN--QRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPYIVALKDATND 167 (292)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCC--HHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTTEEEEEECCCC
T ss_pred HHHHHHcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCCEEEEEeCCCC
Confidence 99999999999999999999987 9999999999999999999999999999999999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCC-CEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcC-CHHHHHHHHHHhhhhHHHH
Q psy11975 611 NIKLANMANQTKDL-NFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAG-KWEEAMKLQHRLVKPDVTV 688 (786)
Q Consensus 611 l~ri~~ll~~~~~~-df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aG-D~eeAreLQ~rL~pLi~~l 688 (786)
+.++.++++ ..++ +|.||+|.|+++++++.+|++|+|++++|++|+++++||+++++| |+++|++ ++.++++.+
T Consensus 168 ~~~~~~~~~-~~~~~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~g~d~~~A~~---~l~~l~~~~ 243 (292)
T 3daq_A 168 FEYLEEVKK-RIDTNSFALYSGNDDNVVEYYQRGGQGVISVIANVIPKEFQALYDAQQSGLDIQDQFK---PIGTLLSAL 243 (292)
T ss_dssp HHHHHHHHT-TSCTTTSEEEESCGGGHHHHHHTTCCEEEESGGGTCHHHHHHHHHHHHTTCCCHHHHH---HHHHHHHHH
T ss_pred HHHHHHHHH-HCCCCCEEEEECCHHHHHHHHhcCCCEEEeCHHHhhHHHHHHHHHHHHcCCCHHHHHH---HHHHHHHHH
Confidence 999999987 3455 899999999999999999999999999999999999999999999 9999998 888888776
Q ss_pred HhhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCC
Q psy11975 689 RNVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGF 741 (786)
Q Consensus 689 ~~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGl 741 (786)
....++..+|++|+++|++.|.+|+|+. +++++++++|+++|+++|+
T Consensus 244 -----~~~~~~~~~K~~l~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~l 290 (292)
T 3daq_A 244 -----SVDINPIPIKALTSYLGFGNYELRLPLV-SLEDTDTKVLREAYDTFKA 290 (292)
T ss_dssp -----TTSSTTTTHHHHHHHTTSSBSCCCTTCC-CCCHHHHHHHHHHHHHHHH
T ss_pred -----hccCCcHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHcCC
Confidence 4456677899999999998899999999 9999999999999998865
No 25
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=2.4e-49 Score=415.73 Aligned_cols=242 Identities=24% Similarity=0.320 Sum_probs=226.1
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||+++++. |+ + |+|||+|||+++|++++++
T Consensus 33 ~gl~v~GttGE~~~Ls~~Er~~v~~~---~~-------------------------~----rvpviaGvg~~~t~~ai~l 80 (283)
T 2pcq_A 33 DGLLVYGSNGEGVHLTPEERARGLRA---LR-------------------------P----RKPFLVGLMEETLPQAEGA 80 (283)
T ss_dssp SCCEETCTTTTGGGSCHHHHHHHHHT---CC-------------------------C----SSCCEEEECCSSHHHHHHH
T ss_pred CEEEECCcCcCchhcCHHHHHHHHHH---HH-------------------------h----CCcEEEeCCCCCHHHHHHH
Confidence 35555 899999999999999998 33 2 7899999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCC-CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQK-KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kp-s~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-- 609 (786)
+++|+++||||+|++||||+++ + ++++++||++||+ ++||++||+|++||++|+++++.+|+++|||+||||+
T Consensus 81 a~~A~~~Gadavlv~~P~y~~~~~--~~~l~~~f~~va~--~lPiilYn~P~~tg~~l~~~~~~~La~~pnivgiKdssg 156 (283)
T 2pcq_A 81 LLEAKAAGAMALLATPPRYYHGSL--GAGLLRYYEALAE--KMPLFLYHVPQNTKVDLPLEAVEALAPHPNVLGIKDSSG 156 (283)
T ss_dssp HHHHHHHTCSEEEECCCCTTGGGT--TTHHHHHHHHHHH--HSCEEEEECHHHHCCCCCHHHHHHHTTSTTEEEEEECSC
T ss_pred HHHHHhcCCCEEEecCCcCCCCCC--HHHHHHHHHHHhc--CCCEEEEeCccccCcCCCHHHHHHHhcCCCEEEEEECCC
Confidence 9999999999999999999998 7 9999999999999 9999999999999999999999999999999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++ .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 157 d~~~~~~~~~--~~~~f~v~~G~d~~~~~~l~~G~~G~is~~~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 233 (283)
T 2pcq_A 157 DLSRIAFYQA--RLQEFRVYTGHAPTFLGALALGAEGGILAAANLAPRAYRALLDHFREGRLAEAQELQKKLFPLGDLL- 233 (283)
T ss_dssp CHHHHHHHHH--HCSSCEEEECCGGGHHHHHHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHh--cCCCEEEEECcHHHHHHHHHcCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 9999999886 4578999999999999999999999999999999999999999999999999999999999998765
Q ss_pred hhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHH--HHHHHHHHHcCCC
Q psy11975 690 NVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGA--EKIKQVLTEAGFL 742 (786)
Q Consensus 690 ~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeek--aeL~~~L~~lGll 742 (786)
....++ .+|++|+++|++.|.+|+|+. +++++++ ++|+++|++++++
T Consensus 234 ----~~~~~~-~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~~~l~~~l~~~~~~ 282 (283)
T 2pcq_A 234 ----AKGGVP-LLKQALRHLGLPAGYPRPPYP-AESPLWERFLPVLEGLKEEGWV 282 (283)
T ss_dssp ----HHHHHH-HHHHHHHHTTCCCCCCCTTSC-SSCTTHHHHHHHHHHHHHTTCC
T ss_pred ----hcCCcH-HHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHHhcCcc
Confidence 233457 999999999998899999999 9999999 9999999998864
No 26
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=100.00 E-value=6e-49 Score=419.48 Aligned_cols=251 Identities=27% Similarity=0.419 Sum_probs=222.7
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|||+++|++++++
T Consensus 47 ~gl~v~GtTGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 98 (318)
T 3qfe_A 47 TGLVILGTNAEAFLLTREERAQLIAT---ARK-------------------------AVGPDFPIMAGVGAHSTRQVLEH 98 (318)
T ss_dssp SEEEESSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHCTTSCEEEECCCSSHHHHHHH
T ss_pred CEEEeCccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCCCHHHHHHH
Confidence 46665 789999999999999999 654 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCc-CCccCHHHHHHHHh-CCCEEEEEeC
Q psy11975 533 TQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVADNSPIPVIIYNNTFVT-NIDISVDTLVKLAH-HENIRGVKDT 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~T-Gv~LSpelL~rLAe-iPNVVGIKDS 609 (786)
+++|+++||||+|+++|+|+ +|. +++++++||++||+++++||||||+|++| |++|+++++.+|++ +|||+||||+
T Consensus 99 a~~a~~~Gadavlv~~P~y~~kp~-~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pnIvgiKds 177 (318)
T 3qfe_A 99 INDASVAGANYVLVLPPAYFGKAT-TPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPNVVGVKLT 177 (318)
T ss_dssp HHHHHHHTCSEEEECCCCC---CC-CHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTTEEEEEES
T ss_pred HHHHHHcCCCEEEEeCCcccCCCC-CHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCCEEEEEeC
Confidence 99999999999999999887 442 59999999999999999999999999997 99999999999997 9999999999
Q ss_pred --CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHH
Q psy11975 610 --DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVT 687 (786)
Q Consensus 610 --Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~ 687 (786)
|+.++.++++...+++|.||+|.|.+++++|.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++...
T Consensus 178 sgd~~~~~~~~~~~~~~~f~v~~G~d~~~l~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~~~~~ 257 (318)
T 3qfe_A 178 CASVGKITRLAATLPPAAFSVFGGQSDFLIGGLSVGSAGCIAAFANVFPKTVSKIYELYKAGKVDQAMELHRKAALAESP 257 (318)
T ss_dssp SCCHHHHHHHHHHSCGGGCEEEESCGGGHHHHHHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHhcCCCCEEEEEecHHHHHHHHHCCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 999999988743346899999999999999999999999999999999999999999999999999999999876642
Q ss_pred HHhhhhccccCHHHHHHHH-----HHcCCCC----CCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 688 VRNVLLMKEMGVPGVRAAM-----ELYGYYG----GRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 688 l~~~~~~~~~~ia~lKaaL-----~lrGI~~----G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
...++..+|++| +++|++. |.+|+|+. +++++++++|+++|++++.++
T Consensus 258 -------~~~~~~~~K~al~~~~~~~~G~~~~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~e 314 (318)
T 3qfe_A 258 -------CKSGIATTKYAAAIFSAKAAGIEDAEEKLRPRKPYD-PPSEAAKQEVRKVMAEVAAIE 314 (318)
T ss_dssp -------C--CHHHHHHHHHHTHHHHTTCTTHHHHTSCSTTSC-CCCHHHHHHHHHHHHHHHHHH
T ss_pred -------HhcCCHHHHHHHHhhHHHhCCCcCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHH
Confidence 245788999975 6799954 78999999 999999999999999877644
No 27
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=100.00 E-value=2.4e-48 Score=414.07 Aligned_cols=246 Identities=19% Similarity=0.213 Sum_probs=226.7
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||+ +|++++++
T Consensus 48 ~gl~v~GtTGE~~~Ls~eEr~~vi~~---~~~-------------------------~~~grvpViaGvg~-st~~ai~l 98 (314)
T 3d0c_A 48 EVIVPNGNTGEFYALTIEEAKQVATR---VTE-------------------------LVNGRATVVAGIGY-SVDTAIEL 98 (314)
T ss_dssp SEECTTSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSEEEEEECS-SHHHHHHH
T ss_pred CEEEECcccCChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEecCCc-CHHHHHHH
Confidence 35554 789999999999999999 554 46689999999999 99999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++|||++|++||||++++ ++++++||++||+++++|||||| +||+ |+++++.+|+++|||+||||+ |
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn---~tg~-l~~~~~~~La~~pnIvgiKdssgd 172 (314)
T 3d0c_A 99 GKSAIDSGADCVMIHQPVHPYIT--DAGAVEYYRNIIEALDAPSIIYF---KDAH-LSDDVIKELAPLDKLVGIKYAIND 172 (314)
T ss_dssp HHHHHHTTCSEEEECCCCCSCCC--HHHHHHHHHHHHHHSSSCEEEEE---CCTT-SCTHHHHHHTTCTTEEEEEECCCC
T ss_pred HHHHHHcCCCEEEECCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEe---CCCC-cCHHHHHHHHcCCCEEEEEeCCCC
Confidence 99999999999999999999987 99999999999999999999999 8999 999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCC--CEEEEeCCcc-hhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHH
Q psy11975 611 NIKLANMANQTKDL--NFSVFAGSAG-YLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVT 687 (786)
Q Consensus 611 l~ri~~ll~~~~~~--df~Vf~G~De-lLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~ 687 (786)
+.++.++++. .++ +|.||+|.|. ++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.
T Consensus 173 ~~~~~~~~~~-~~~~~~f~v~~G~d~~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~ 251 (314)
T 3d0c_A 173 IQRVTQVMRA-VPKSSNVAFICGTAEKWAPFFYHAGAVGFTSGLVNVFPQKSFALLEALEEGNQEKIWDVWEDVVPFEDL 251 (314)
T ss_dssp HHHHHHHHHH-SCGGGCCEEEETTHHHHHHHHHHHTCCEEEESGGGTCHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCCCCCEEEEEeCcHHHHHHHHHcCCCEEEecHHHhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 9999999873 455 8999999999 99999999999999999999999999999999999999999999999999976
Q ss_pred HHhhhhcc--ccC-HHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 688 VRNVLLMK--EMG-VPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 688 l~~~~~~~--~~~-ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
+ .. ... ++.+|++|+++|++.|.+|+|+. +++++++++|+++|+++++.+
T Consensus 252 ~-----~~~~~~~~~~~iK~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~~ 304 (314)
T 3d0c_A 252 R-----AKHNNGNNVVIIKEAMEQLGLRAGVTREPVN-PLSPNDRLELEELLKSWNTQE 304 (314)
T ss_dssp H-----HHHHHTTHHHHHHHHHHHTTCCCCCCCTTCC-SCCHHHHHHHHHHHHHHHHHC
T ss_pred H-----HhhcCCCcHHHHHHHHHHCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHhchhh
Confidence 5 22 233 77899999999998899999999 999999999999999886533
No 28
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=100.00 E-value=5.3e-48 Score=405.83 Aligned_cols=240 Identities=22% Similarity=0.257 Sum_probs=223.2
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++| ||+|||+++|++++++
T Consensus 34 ~gl~v~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~g---vi~Gvg~~~t~~ai~l 82 (286)
T 2r91_A 34 DVVFVAGTTGLGPALSLQEKMELTDA---ATS-------------------------AARR---VIVQVASLNADEAIAL 82 (286)
T ss_dssp CEEEETSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HCSS---EEEECCCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCC---EEEeeCCCCHHHHHHH
Confidence 46666 889999999999999999 664 3345 9999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-- 609 (786)
+++|+++|||++|++||||++ ++ ++++++||++||+++++||||||+|++||++|+++++.+ +|||+||||+
T Consensus 83 a~~A~~~Gadavlv~~P~y~~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~---~pnivgiKds~g 157 (286)
T 2r91_A 83 AKYAESRGAEAVASLPPYYFPRLS--ERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKE---LGCIRGVKDTNE 157 (286)
T ss_dssp HHHHHHTTCSEEEECCSCSSTTCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHH---HSCEEEEEECCS
T ss_pred HHHHHhcCCCEEEEcCCcCCCCCC--HHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHh---cCCEEEEEeCCC
Confidence 999999999999999999999 87 999999999999999999999999999999999999999 8999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++ .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.+++..+
T Consensus 158 d~~~~~~~~~--~~~~f~v~~G~d~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 234 (286)
T 2r91_A 158 SLAHTLAYKR--YLPQARVYNGSDSLVFASFAVRLDGVVASSANYLPELLAGIRDAVAAGDIERARSLQFLLDEIVESA- 234 (286)
T ss_dssp CHHHHHHHHH--HCTTSEEEECCGGGHHHHHHTTCSEECCGGGTTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHh--cCCCEEEEEccHHHHHHHHHcCCCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 9999999886 4578999999999999999999999999999999999999999999999999999999999999776
Q ss_pred hhhhccccCH-HHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHc
Q psy11975 690 NVLLMKEMGV-PGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEA 739 (786)
Q Consensus 690 ~~~~~~~~~i-a~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~l 739 (786)
....++ ..+|++|+++|++.|.+|+|+. +++++++++|+++|+++
T Consensus 235 ----~~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~ 280 (286)
T 2r91_A 235 ----RHIGYAAAVYELVEIFQGYEAGEPRGPVY-PLDPEEKAWLRAAVAKA 280 (286)
T ss_dssp ----HHHCHHHHHHHHHHHHHCSCCCBCCTTSC-CCCHHHHHHHHHHTHHH
T ss_pred ----hccCChHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHH
Confidence 233457 8999999999998899999999 99999999999998875
No 29
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=100.00 E-value=8.9e-48 Score=405.65 Aligned_cols=241 Identities=20% Similarity=0.210 Sum_probs=224.1
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |+++ ++| ||+|||+++|++++++
T Consensus 35 ~gl~~~GttGE~~~Ls~eEr~~v~~~---~~~~-------------------------~~g---viaGvg~~~t~~ai~l 83 (293)
T 1w3i_A 35 DKLFVNGTTGLGPSLSPEEKLENLKA---VYDV-------------------------TNK---IIFQVGGLNLDDAIRL 83 (293)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHTT-------------------------CSC---EEEECCCSCHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHHH-------------------------cCC---EEEecCCCCHHHHHHH
Confidence 46666 889999999999999999 6643 345 9999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-- 609 (786)
+++|+++|||++|+++|||++ ++ ++++++||++||+++++||||||+|++||++|+++++.+ +|||+||||+
T Consensus 84 a~~A~~~Gadavlv~~P~y~~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~---~pnIvgiKds~g 158 (293)
T 1w3i_A 84 AKLSKDFDIVGIASYAPYYYPRMS--EKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKE---IGCFTGVKDTIE 158 (293)
T ss_dssp HHHGGGSCCSEEEEECCCSCSSCC--HHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHH---HCCEEEEEECCS
T ss_pred HHHHHhcCCCEEEEcCCCCCCCCC--HHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHh---cCCEEEEEeCCC
Confidence 999999999999999999999 87 999999999999999999999999999999999999999 8999999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++ .+++|.||+|.|.++++++.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 159 d~~~~~~~~~--~~~~f~v~~G~d~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 235 (293)
T 1w3i_A 159 NIIHTLDYKR--LNPNMLVYSGSDMLIATVASTGLDGNVAAGSNYLPEVTVTIKKLAMERKIDEALKLQFLHDEVIEAS- 235 (293)
T ss_dssp CHHHHHHHHH--HCTTSEEEECCSTTHHHHHHTTCCEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHh--cCCCEEEEEccHHHHHHHHHcCCCEEEeCHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 9999999886 4578999999999999999999999999999999999999999999999999999999999999876
Q ss_pred hhhhccccC-HHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q psy11975 690 NVLLMKEMG-VPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAG 740 (786)
Q Consensus 690 ~~~~~~~~~-ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lG 740 (786)
....+ +..+|++|+++|++.|.+|+|+. +++++++++|+++|++++
T Consensus 236 ----~~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~ 282 (293)
T 1w3i_A 236 ----RIFGSLSSNYVLTKYFQGYDLGYPRPPIF-PLDDEEERQLIKKVEGIR 282 (293)
T ss_dssp ----HTTCHHHHHHHHHHHHHSSCCBCCCTTSC-CCCHHHHHHHHHHHHHHH
T ss_pred ----HhcCChHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHHH
Confidence 33434 88999999999998899999999 999999999999998864
No 30
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=100.00 E-value=1.3e-47 Score=407.50 Aligned_cols=247 Identities=19% Similarity=0.279 Sum_probs=224.1
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 44 ~gl~v~GtTGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~grvpviaGvg~~~t~~ai~l 95 (309)
T 3fkr_A 44 DGLCILANFSEQFAITDDERDVLTRT---ILE-------------------------HVAGRVPVIVTTSHYSTQVCAAR 95 (309)
T ss_dssp SCEEESSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSCEEEECCCSSHHHHHHH
T ss_pred CEEEECccccCcccCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEecCCchHHHHHHH
Confidence 35555 799999999999999999 553 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCC---CCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-hCCCEEEEE-
Q psy11975 533 TQKAAKAGANAALILCPYY---FQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVK- 607 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY---~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-eiPNVVGIK- 607 (786)
+++|+++||||+|++|||| ++++ ++++++||++||+++++||||||+|. ||++|+++++.+|+ ++|||+|||
T Consensus 96 a~~A~~~Gadavlv~~Pyy~~~~~~s--~~~l~~~f~~va~a~~lPiilYn~P~-tg~~l~~~~~~~La~~~pnIvgiK~ 172 (309)
T 3fkr_A 96 SLRAQQLGAAMVMAMPPYHGATFRVP--EAQIFEFYARVSDAIAIPIMVQDAPA-SGTALSAPFLARMAREIEQVAYFXI 172 (309)
T ss_dssp HHHHHHTTCSEEEECCSCBTTTBCCC--HHHHHHHHHHHHHHCSSCEEEEECGG-GCCCCCHHHHHHHHHHSTTEEEEEE
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCC--HHHHHHHHHHHHHhcCCCEEEEeCCC-CCCCCCHHHHHHHHhhCCCEEEEEC
Confidence 9999999999999999999 6776 99999999999999999999999997 99999999999999 599999999
Q ss_pred eC--CHHHHHHHHhhcCCCCE-EEEeCCcch-hhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhh
Q psy11975 608 DT--DNIKLANMANQTKDLNF-SVFAGSAGY-LLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVK 683 (786)
Q Consensus 608 DS--Dl~ri~~ll~~~~~~df-~Vf~G~Del-LL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~p 683 (786)
++ |+.++.++++. .+.+| .+|+|.|.+ +++.+.+|++|+|+ +|++|+++++||+++++||+++|+++|+++.+
T Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~~~~G~d~~~l~~~l~~G~~G~i~--~n~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~ 249 (309)
T 3fkr_A 173 ETPGAANKLRELIRL-GGDAIEGPWDGEEAITLLADLHAGATGAMT--GGGFPDGIRPILEAWREGRHDDAYARYQAWLP 249 (309)
T ss_dssp CSSSHHHHHHHHHHH-HGGGCCEEEECGGGTTHHHHHHTTCCEECC--CSSCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHh-cCCceeeecCCchHHHHHHHHHCCCcEEEE--hhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 55 68888888763 34566 699999996 67999999999995 59999999999999999999999999999999
Q ss_pred hHHHHHhhhhccccCHHHHHHHHHHcCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 684 PDVTVRNVLLMKEMGVPGVRAAMELYGYY-GGRSRRPLPAALKPGGAEKIKQVLTEAGFL 742 (786)
Q Consensus 684 Li~~l~~~~~~~~~~ia~lKaaL~lrGI~-~G~vR~PL~~pLseeekaeL~~~L~~lGll 742 (786)
+++.+ ....++..+|++|+++|++ .+.+|+|+. +++++++++|+++|++++.+
T Consensus 250 l~~~~-----~~~~~~~~~K~al~~~G~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~ 303 (309)
T 3fkr_A 250 LINHE-----NRQSGILTAKALMREGGVIASERPRHPMP-ELHPDTRAELLAIARRLDPL 303 (309)
T ss_dssp HHHHH-----HHTTGGGHHHHHHHHTTSSSCCCCCTTSC-CCCHHHHHHHHHHHHHHCCG
T ss_pred HHHHH-----hccCCHHHHHHHHHhCCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHhhHH
Confidence 99876 4456789999999999985 688999999 99999999999999999853
No 31
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=100.00 E-value=1.5e-47 Score=407.99 Aligned_cols=250 Identities=20% Similarity=0.218 Sum_probs=224.6
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||+ +|++++++
T Consensus 48 ~Gl~v~GtTGE~~~Ls~eEr~~v~~~---~v~-------------------------~~~grvpViaGvg~-~t~~ai~l 98 (316)
T 3e96_A 48 DVIVPCGNTSEFYALSLEEAKEEVRR---TVE-------------------------YVHGRALVVAGIGY-ATSTAIEL 98 (316)
T ss_dssp CEECTTSGGGTGGGSCHHHHHHHHHH---HHH-------------------------HHTTSSEEEEEECS-SHHHHHHH
T ss_pred CEEEeCccccCcccCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEEeCc-CHHHHHHH
Confidence 35555 789999999999999999 554 46789999999997 99999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--C
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--D 610 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--D 610 (786)
+++|+++||||+|+++|||++++ ++++++||++||+++++|||+||+ |.+|+++++.+|+++|||+||||+ |
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s--~~~l~~~f~~va~a~~lPiilYn~----g~~l~~~~~~~La~~pnIvgiKdssgd 172 (316)
T 3e96_A 99 GNAAKAAGADAVMIHMPIHPYVT--AGGVYAYFRDIIEALDFPSLVYFK----DPEISDRVLVDLAPLQNLVGVKYAIND 172 (316)
T ss_dssp HHHHHHHTCSEEEECCCCCSCCC--HHHHHHHHHHHHHHHTSCEEEEEC----CTTSCTHHHHHHTTCTTEEEEEECCCC
T ss_pred HHHHHhcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHhCCCCEEEEeC----CCCCCHHHHHHHHcCCCEEEEEeCCCC
Confidence 99999999999999999999987 999999999999999999999997 789999999999999999999999 9
Q ss_pred HHHHHHHHhhcCCC-CEE-EEeCCcchhh-hhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHH
Q psy11975 611 NIKLANMANQTKDL-NFS-VFAGSAGYLL-SGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVT 687 (786)
Q Consensus 611 l~ri~~ll~~~~~~-df~-Vf~G~DelLL-~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~ 687 (786)
+.++.++++. .++ +|. ||+|.|++++ ..+.+|++|+|++++|++|+++++||+++++||+++|+++|+++.++...
T Consensus 173 ~~~~~~~~~~-~~~~~f~~v~~G~d~~~~~~~l~~G~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~ 251 (316)
T 3e96_A 173 LPRFAKVVRS-IPEEHQIAWICGTAEKWAPFFWHAGAKGFTSGLVNLLPQKAVEMLEALRNNDNDAVWRIWEDIVPFEDL 251 (316)
T ss_dssp HHHHHHHHTT-SCGGGCCEEEETTCTTTHHHHHHHTCCEEEESGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-cCCCCceEEEeCChHHHHHHHHHCCCCEEEechhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHhHHHHH
Confidence 9999999873 444 798 9999998755 56799999999999999999999999999999999999999999998754
Q ss_pred HHhhhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCCc
Q psy11975 688 VRNVLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLVP 744 (786)
Q Consensus 688 l~~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~~ 744 (786)
. . ......++..+|++|+++|++.|.+|+|+. +++++++++|+++|++++++..
T Consensus 252 ~-~-~~~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~l~~~ 305 (316)
T 3e96_A 252 R-G-KYNQGNNVVVIKEAMEMLRQNAGVTRAPVN-ELSNEDKQLVTELLSSWKLLQP 305 (316)
T ss_dssp H-T-TTTTTTTTHHHHHHHHHTTCCCBBCCTTCC-CCCHHHHHHHHHHHHHTTC---
T ss_pred H-H-HhccCccHHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHcCCCCC
Confidence 3 1 012345789999999999999999999999 9999999999999999998763
No 32
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=100.00 E-value=2e-47 Score=406.52 Aligned_cols=247 Identities=13% Similarity=0.194 Sum_probs=221.5
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ ++ ||+|||+|||+++|++++++
T Consensus 44 ~Gl~v~GtTGE~~~Lt~~Er~~v~~~---~v~-------------------------~~-grvpViaGvg~~~t~~ai~l 94 (313)
T 3dz1_A 44 EGVTVLGILGEAPKLDAAEAEAVATR---FIK-------------------------RA-KSMQVIVGVSAPGFAAMRRL 94 (313)
T ss_dssp SEEEESTGGGTGGGSCHHHHHHHHHH---HHH-------------------------HC-TTSEEEEECCCSSHHHHHHH
T ss_pred CEEEeCccCcChhhCCHHHHHHHHHH---HHH-------------------------Hc-CCCcEEEecCCCCHHHHHHH
Confidence 46666 799999999999999999 543 56 89999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCC--CCEEEEeCCCCcCCccCHHHHHHHH-hCCCEEEEEe-
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSP--IPVIIYNNTFVTNIDISVDTLVKLA-HHENIRGVKD- 608 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtd--LPIiLYNiP~~TGv~LSpelL~rLA-eiPNVVGIKD- 608 (786)
+++|+++||||+|++|||| +++ ++++++||++||++++ +||||||+|++||++|+++++.+|+ ++|||+||||
T Consensus 95 a~~A~~~Gadavlv~~P~~-~~s--~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pnIvgiKd~ 171 (313)
T 3dz1_A 95 ARLSMDAGAAGVMIAPPPS-LRT--DEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSASCVMLKHE 171 (313)
T ss_dssp HHHHHHHTCSEEEECCCTT-CCS--HHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSSEEEEEEC
T ss_pred HHHHHHcCCCEEEECCCCC-CCC--HHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCCEEEEEcC
Confidence 9999999999999999985 565 9999999999999998 9999999999999999999999999 5999999998
Q ss_pred C--CHHHHHHHHhhcCC----CCEEEEeCCcchhhh-hhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy11975 609 T--DNIKLANMANQTKD----LNFSVFAGSAGYLLS-GLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRL 681 (786)
Q Consensus 609 S--Dl~ri~~ll~~~~~----~df~Vf~G~DelLL~-aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL 681 (786)
+ |+.++.++++. .+ ++|.||+|.|+++++ +|.+|++|+|++ |++|+++++||+++++||+++|+++|+++
T Consensus 172 ~~~~~~~~~~~~~~-~~~~~~~~f~v~~G~d~~~l~~~l~~G~~G~i~~--~~~P~~~~~l~~a~~~Gd~~~A~~l~~~l 248 (313)
T 3dz1_A 172 DWPGLEKITTLRGF-QKDGSLRPLSILCGNGGLFLDFEMERGADGAMTG--YCFPDMLVDVVKLSKAGQRDLAHNLFDAH 248 (313)
T ss_dssp CSSCHHHHHHHHHH-HHHTSSCCCEEEECGGGTTHHHHHHHTCCEEEEC--CSCHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh-cCccCCCCeEEEeCCcHHHHHHHHHCCCcEEEeC--cccHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 3 89999888763 33 789999999998877 599999999975 78999999999999999999999999999
Q ss_pred hhhHHHHHhhhhccc-cCHHHHHHHHHHcCCC-CCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 682 VKPDVTVRNVLLMKE-MGVPGVRAAMELYGYY-GGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 682 ~pLi~~l~~~~~~~~-~~ia~lKaaL~lrGI~-~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
.++++.+ ... .++..+|++|+++|++ .+.+|+|+. +|+++++++|+++|+++++.+
T Consensus 249 ~~l~~~~-----~~~~~~~~~~K~al~~~G~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~~~~ 306 (313)
T 3dz1_A 249 LPLIRYE-----HQQGVGLSVRKYVLKKRGLLSSSAQRKPGA-SLTDTAREEVDYLLSRLARVE 306 (313)
T ss_dssp HHHHHHH-----CSTTHHHHHHHHHHHHTTSCSCCCCCSSCC-CCCHHHHHHHHHHHHHC----
T ss_pred HHHHHHH-----hccCCCHHHHHHHHHHcCCCCCCCCCCCCC-CCCHHHHHHHHHHHHhccccc
Confidence 9998766 222 3688999999999984 789999999 999999999999999998865
No 33
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.6e-47 Score=409.30 Aligned_cols=242 Identities=17% Similarity=0.162 Sum_probs=222.5
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. .++||+|||+|||+++|++++++
T Consensus 62 ~Gl~v~GtTGE~~~Ls~eEr~~vi~~-------------------------------~~~grvpViaGvg~~st~eai~l 110 (344)
T 2hmc_A 62 SAVVYCGSMGDWPLLTDEQRMEGVER-------------------------------LVKAGIPVIVGTGAVNTASAVAH 110 (344)
T ss_dssp CCEEESSGGGTGGGSCHHHHHHHHHH-------------------------------HHHTTCCEEEECCCSSHHHHHHH
T ss_pred CEEEeCccCcChhhCCHHHHHHHHHH-------------------------------HhCCCCcEEEecCCCCHHHHHHH
Confidence 35555 789999999999999996 24579999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHh-cCCCCEEEEeCCCCcCCccCHHHHHHH-HhCCCEEEEEeC
Q psy11975 533 TQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVAD-NSPIPVIIYNNTFVTNIDISVDTLVKL-AHHENIRGVKDT 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAe-AtdLPIiLYNiP~~TGv~LSpelL~rL-AeiPNVVGIKDS 609 (786)
+++|+++|||++|+++|||++ ++ ++++++||++||+ ++++||||||+| +||++|+++++.+| +++|||+||||+
T Consensus 111 a~~A~~~Gadavlv~~P~y~~~~s--~~~l~~~f~~IA~aa~~lPiilYn~P-~tg~~l~~e~~~~L~a~~pnIvGiKds 187 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVIPRVLSRGSV--IAAQKAHFKAILSAAPEIPAVIYNSP-YYGFATRADLFFALRAEHKNLVGFKEF 187 (344)
T ss_dssp HHHHHHHTCSEEEECCCCSSSTTC--HHHHHHHHHHHHHHSTTSCEEEEEBG-GGTBCCCHHHHHHHHHHCTTEEEEEEC
T ss_pred HHHHHhcCCCEEEECCCccCCCCC--HHHHHHHHHHHHhhCCCCcEEEEecC-ccCCCcCHHHHHHHHhcCCCEEEEEcC
Confidence 999999999999999999999 76 9999999999999 899999999999 99999999999999 899999999999
Q ss_pred -C---HHHHHHHHhhcCCCCEEEEeCCcchhhhhh-ccCCccccccccccccHHHHHHHHH---HHcCCHHHHHHHHHHh
Q psy11975 610 -D---NIKLANMANQTKDLNFSVFAGSAGYLLSGL-LVGCAGGINALSAVLGGPICELYDL---AKAGKWEEAMKLQHRL 681 (786)
Q Consensus 610 -D---l~ri~~ll~~~~~~df~Vf~G~DelLL~aL-~~GAdG~Isg~aN~~Pel~vaL~eA---~~aGD~eeAreLQ~rL 681 (786)
. +.++.++++ ..+++|.||+|.|+++++++ .+|++|+|++++|++|+++++||++ +++|| ++|+++|+++
T Consensus 188 sgp~d~~~~~~~~~-~~~~~f~v~~G~D~~~l~~l~~~Ga~G~is~~anv~P~~~~~l~~a~~~~~~Gd-~~A~~l~~~l 265 (344)
T 2hmc_A 188 GGPADMRYAAENIT-SRDDEVTLMIGVDTAVVHGFVNCGATGAITGIGNVLPKEVIHLCKLSQAAAKGD-ADARARALEL 265 (344)
T ss_dssp SCHHHHHHHHHHTS-CSSSSCEEEECSGGGHHHHHHHSCCCEEEESGGGTSHHHHHHHHHHHHHHTTTC-HHHHHHHHHH
T ss_pred CCCCCHHHHHHHHH-HcCCCEEEEECcHHHHHHHHHHcCCCEEEeCHHHhhHHHHHHHHHhHHHHhcCc-HHHHHHHHHH
Confidence 6 678888876 35678999999999999999 9999999999999999999999999 99999 9999999999
Q ss_pred h----hhHHHHHhhhhccccCHHHHHHHHHHcCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHcCC
Q psy11975 682 V----KPDVTVRNVLLMKEMGVPGVRAAMELYGYYGGRSRRPL---PAALKPGGAEKIKQVLTEAGF 741 (786)
Q Consensus 682 ~----pLi~~l~~~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL---~~pLseeekaeL~~~L~~lGl 741 (786)
. ++++.+ ....++..+|++|+++|+ |.+|+|+ . +|+++++++|+++|+.++.
T Consensus 266 ~~~~~~l~~~~-----~~~~~~~~~K~al~~~G~--g~~R~Pl~~~~-~l~~~~~~~l~~~l~~~~~ 324 (344)
T 2hmc_A 266 EQALAVLSSFD-----EGPDLVLYFKYMMVLKGD--KEYTLHFNETD-ALTDSQRGYVEAQFKLFNS 324 (344)
T ss_dssp HHHTHHHHHGG-----GSTTHHHHHHHHHHHTTC--GGGSCCSSTTC-CCCHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHH-----hcCCcHHHHHHHHHHCCC--CCCCCCCCCCC-CcCHHHHHHHHHHHHHHhH
Confidence 9 888654 344568899999999999 8899999 9 9999999999999987543
No 34
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=100.00 E-value=6e-47 Score=398.46 Aligned_cols=239 Identities=21% Similarity=0.254 Sum_probs=222.1
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||+++++. |+++ ++| ||+|||+++|++++++
T Consensus 35 ~gl~v~GtTGE~~~Ls~eEr~~v~~~---~~~~-------------------------~~g---ViaGvg~~~t~~ai~l 83 (288)
T 2nuw_A 35 DAIFVNGTTGLGPALSKDEKRQNLNA---LYDV-------------------------THK---LIFQVGSLNLNDVMEL 83 (288)
T ss_dssp CEEEETSTTTTGGGSCHHHHHHHHHH---HTTT-------------------------CSC---EEEECCCSCHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHHH-------------------------hCC---eEEeeCCCCHHHHHHH
Confidence 46666 889999999999999999 6643 345 9999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--
Q psy11975 533 TQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-- 609 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-- 609 (786)
+++|+++|||++|++||||++ ++ ++++++||++||+++++|||+||+|++||++|+++++.+| ||+||||+
T Consensus 84 a~~A~~~Gadavlv~~P~y~~~~s--~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L----nIvgiKdssg 157 (288)
T 2nuw_A 84 VKFSNEMDILGVSSHSPYYFPRLP--EKFLAKYYEEIARISSHSLYIYNYPAATGYDIPPSILKSL----PVKGIKDTNQ 157 (288)
T ss_dssp HHHHHTSCCSEEEECCCCSSCSCC--HHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHTTT----TEEEEEECCS
T ss_pred HHHHHhcCCCEEEEcCCcCCCCCC--HHHHHHHHHHHHHhcCCCEEEEECchHhCcCCCHHHHhcc----EEEEEEeCCC
Confidence 999999999999999999999 87 9999999999999999999999999999999999999999 99999999
Q ss_pred CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHH
Q psy11975 610 DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVR 689 (786)
Q Consensus 610 Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~ 689 (786)
|+.++.++++ .+++|.||+|.|+++++++.+ ++|+|++++|++|+++++||+++++||+++|+++|+++.++++.+
T Consensus 158 d~~~~~~~~~--~~~~f~v~~G~d~~~~~~l~~-~~G~is~~an~~P~~~~~l~~a~~~Gd~~~A~~l~~~l~~l~~~~- 233 (288)
T 2nuw_A 158 DLAHSLEYKL--NLPGVKVYNGSNTLIYYSLLS-LDGVVASFTNFIPEVIVKQRDLIKQGKLDDALRLQELINRLADIL- 233 (288)
T ss_dssp CHHHHHHHHH--HSTTCEEEECCGGGHHHHHTT-SSEEECGGGGTCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH-
T ss_pred CHHHHHHHHh--cCCCeEEEECcHHHHHHHHHH-hCEEEecHHHhCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-
Confidence 9999999886 457899999999999999999 999999999999999999999999999999999999999999776
Q ss_pred hhhhccccC-HHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q psy11975 690 NVLLMKEMG-VPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAG 740 (786)
Q Consensus 690 ~~~~~~~~~-ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lG 740 (786)
....+ +..+|++|+++|++.|.+|+|+. +++++++++|+++|++++
T Consensus 234 ----~~~~~~~~~~K~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~ 280 (288)
T 2nuw_A 234 ----RKYGSISAIYVLVNEFQGYDVGYPRPPIF-PLTDEEALSLKREIEPLK 280 (288)
T ss_dssp ----HTTCHHHHHHHHHHHHHSSCCCBCCTTSC-CCCHHHHHHHHHHHHHHH
T ss_pred ----HhcCChHHHHHHHHHHcCCCCCCcCCCCC-CCCHHHHHHHHHHHHHHH
Confidence 33434 88999999999998899999999 999999999999998864
No 35
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=2.3e-46 Score=395.10 Aligned_cols=238 Identities=20% Similarity=0.284 Sum_probs=219.7
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|++. |++ +++||+|||+|+|+++|++++++
T Consensus 39 ~gl~~~GttGE~~~Ls~~Er~~v~~~---~~~-------------------------~~~gr~pviaGvg~~~t~~ai~l 90 (294)
T 3b4u_A 39 DSVTLFGTTGEGCSVGSRERQAILSS---FIA-------------------------AGIAPSRIVTGVLVDSIEDAADQ 90 (294)
T ss_dssp SEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------TTCCGGGEEEEECCSSHHHHHHH
T ss_pred CEEEECccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCcEEEeCCCccHHHHHHH
Confidence 46666 889999999999999999 654 45689999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcC---CCCEEEEeCCCCcCCccCHHHHHHHH-hCCC-EEEE
Q psy11975 533 TQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNS---PIPVIIYNNTFVTNIDISVDTLVKLA-HHEN-IRGV 606 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAt---dLPIiLYNiP~~TGv~LSpelL~rLA-eiPN-VVGI 606 (786)
+++|+++|||++|++||||++ ++ ++++++||++||+++ ++||||||+|++||++|+++++.+|+ ++|| |+||
T Consensus 91 a~~A~~~Gadavlv~~P~y~~~~s--~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~ivgi 168 (294)
T 3b4u_A 91 SAEALNAGARNILLAPPSYFKNVS--DDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGIVTGV 168 (294)
T ss_dssp HHHHHHTTCSEEEECCCCSSCSCC--HHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTTEEEE
T ss_pred HHHHHhcCCCEEEEcCCcCCCCCC--HHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCcEEEE
Confidence 999999999999999999999 87 999999999999999 99999999999999999999999999 8999 9999
Q ss_pred EeC--CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhh
Q psy11975 607 KDT--DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKP 684 (786)
Q Consensus 607 KDS--Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pL 684 (786)
||+ |+.++.++++. .+ +|.||+|.|.++++++.+|++|+|++++|++|+++++||+ + +++|+++.++
T Consensus 169 Kds~gd~~~~~~~~~~-~~-~f~v~~G~d~~~l~~l~~G~~G~is~~~n~~P~~~~~l~~---~------~~l~~~l~~l 237 (294)
T 3b4u_A 169 KDSSGNWSHTERLLKE-HG-DLAILIGDERDLARGVRLGGQGAISGVANFLTQEVRAMAV---D------GKDDPRIVDL 237 (294)
T ss_dssp EECCCCHHHHHHHHHH-HT-TSEEEECCHHHHHHHHHTTCCEEEESGGGTCHHHHHHHHT---T------CCCCHHHHHH
T ss_pred EECCCCHHHHHHHHHh-CC-CeEEEEccHHHHHHHHHCCCCEEEeCHHHhCHHHHHHHHH---H------HHHHHHHHHH
Confidence 999 99999999874 34 8999999999999999999999999999999999999999 1 7899999999
Q ss_pred HHHHHhhhhccccCHHHHHHHHHH-cC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHcC
Q psy11975 685 DVTVRNVLLMKEMGVPGVRAAMEL-YG-YYGGRSRRPLPAALKPGGAEKIKQVLTEAG 740 (786)
Q Consensus 685 i~~l~~~~~~~~~~ia~lKaaL~l-rG-I~~G~vR~PL~~pLseeekaeL~~~L~~lG 740 (786)
++.+ ....++..+|++|++ +| ++.|.+|+|+. +++++++++|+++|+++.
T Consensus 238 ~~~~-----~~~~~~~~~K~al~~~~G~~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~~ 289 (294)
T 3b4u_A 238 VVEL-----LKFPVTPAVKVLVSHTTGETIWSDVRAPLV-AISPEDRRQIEGAFDALF 289 (294)
T ss_dssp HHHH-----TTSCHHHHHHHHHHHHHCCGGGGCCCTTSC-CCCHHHHHHHHHHHHHHH
T ss_pred HHHH-----hccCCHHHHHHHHHHhCCCCCCCCcCCCCC-CCCHHHHHHHHHHHHHHH
Confidence 8776 445568999999999 99 77799999999 999999999999998753
No 36
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=100.00 E-value=3.4e-45 Score=396.73 Aligned_cols=240 Identities=22% Similarity=0.247 Sum_probs=216.2
Q ss_pred ceeee---cCCCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHH
Q psy11975 456 SHYFK---AHSSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDL 532 (786)
Q Consensus 456 ~Gvf~---agE~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIEL 532 (786)
.|++. +||+.+||.+||++|+++ |++ +++||+|||+|||+++|++++++
T Consensus 95 ~Gl~v~GTTGE~~~Ls~eEr~~vi~~---~ve-------------------------~~~grvpViaGvg~~st~eai~l 146 (360)
T 4dpp_A 95 EGVIVGGTTGEGQLMSWDEHIMLIGH---TVN-------------------------CFGGSIKVIGNTGSNSTREAIHA 146 (360)
T ss_dssp CEEEESSTTTTGGGSCHHHHHHHHHH---HHH-------------------------HHTTTSEEEEECCCSSHHHHHHH
T ss_pred CEEEecccccChhhCCHHHHHHHHHH---HHH-------------------------HhCCCCeEEEecCCCCHHHHHHH
Confidence 35555 889999999999999998 554 46789999999999999999999
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC-CH
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-DN 611 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-Dl 611 (786)
+++|+++||||+|+++|||++++ ++++++||++||++ +|||+||+|++||++|+++++.+|+++|||+||||+ .-
T Consensus 147 a~~A~~~Gadavlvv~PyY~k~s--q~gl~~hf~~IA~a--~PiilYNiP~rTg~~ls~e~l~~La~~pnIvGIKdssgd 222 (360)
T 4dpp_A 147 TEQGFAVGMHAALHINPYYGKTS--IEGLIAHFQSVLHM--GPTIIYNVPGRTGQDIPPRAIFKLSQNPNLAGVKECVGN 222 (360)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCC--HHHHHHHHHTTGGG--SCEEEEECHHHHSCCCCHHHHHHHTTSTTEEEEEECSCH
T ss_pred HHHHHHcCCCEEEEcCCCCCCCC--HHHHHHHHHHHHHh--CCEEEEeCCcccCCCCCHHHHHHHhcCCCEEEEEeCCCc
Confidence 99999999999999999999987 99999999999997 699999999999999999999999999999999999 33
Q ss_pred HHHHHHHhhcCCCCEEEEeCCcchhhh-hhccCCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHh
Q psy11975 612 IKLANMANQTKDLNFSVFAGSAGYLLS-GLLVGCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRN 690 (786)
Q Consensus 612 ~ri~~ll~~~~~~df~Vf~G~DelLL~-aL~~GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~ 690 (786)
.++.+. .+++|.||+|.|.+++. .+.+|++|+|++++|++|+++++||+ +|+ |+++|+++.++++.+
T Consensus 223 ~~i~~~----~~~~f~v~sG~D~~~l~~~l~~Ga~G~Is~~aNv~P~~~~~l~~---aG~---a~~l~~~l~pl~~~l-- 290 (360)
T 4dpp_A 223 KRVEEY----TENGVVVWSGNDDECHDSRWDYGATGVISVTSNLVPGLMRKLMF---EGR---NSSLNSKLLPLMAWL-- 290 (360)
T ss_dssp HHHHHH----HHTTCCEEECCGGGHHHHHHHSCCCEEEESGGGTCHHHHHHHHH---SCC---CHHHHHHHHHHHHHH--
T ss_pred HHHHHh----hCCCEEEEeCChHHHHHHHHHcCCCEEEccchhhcHHHHHHHHH---hhh---HHHHHHHHHHHHHHH--
Confidence 444433 24689999999998776 58999999999999999999999987 464 688999999999877
Q ss_pred hhhccccCHHHHHHHHHHcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHcCCCC
Q psy11975 691 VLLMKEMGVPGVRAAMELYGYYGGRSRRPLPAALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 691 ~~~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~pLseeekaeL~~~L~~lGll~ 743 (786)
....++..+|++|+++|++.+.+|+|+. +|+++++++|+++|+++|++.
T Consensus 291 ---~~~~~p~~vK~al~~~G~~~g~~R~Pl~-~l~~~~~~~l~~~l~~~gl~~ 339 (360)
T 4dpp_A 291 ---FHEPNPIGINTALAQLGVSRPVFRLPYV-PLPLSKRLEFVKLVKEIGREH 339 (360)
T ss_dssp ---TSSSTTHHHHHHHHHHTSSCSEEETTCC-CCCHHHHHHHHHHHHHHCGGG
T ss_pred ---HcCCCHHHHHHHHHHCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHcCCcc
Confidence 4566789999999999999899999999 999999999999999987754
No 37
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=99.66 E-value=6.2e-18 Score=160.32 Aligned_cols=100 Identities=25% Similarity=0.346 Sum_probs=72.7
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCCC---------CCcEEEEEeCCCCCcccccccccccccccchHHHhHhhhhc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAPT---------QGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHHRSRKKL 424 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~---------~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~~~~kr~ 424 (786)
...|.+||||||||+|||||||+|++++.. .+.|+|+|||++. .++||..++|++|.++.+.+....+
T Consensus 20 ~~~~~~GdlVwaK~~g~P~WPa~V~~~~~~~~~~~~~~~~~~~~V~FFg~~~-~~aWv~~~~l~pf~~~~~~~~~k~~-- 96 (134)
T 2gfu_A 20 SSDFSPGDLVWAKMEGYPWWPSLVYNHPFDGTFIREKGKSVRVHVQFFDDSP-TRGWVSKRLLKPYTGSKSKEAQKGG-- 96 (134)
T ss_dssp SCCCCTTSEEEECCTTSCCEEEECCCCSSTTCCEEESSSCEEEEEEECSSSC-EEEEECGGGEEESCCTTSTTTSTTC--
T ss_pred CCCCCCCCEEEEeecCCCCCCeeecchhhhhhhhhccCCCceEEEEECCCCC-ceEEECHHHcccCcchhHHHHhhcc--
Confidence 468999999999999999999999998642 2479999999953 4777899999999998775421111
Q ss_pred cCCcccccccccccCCCCCCcccccccccccceeeecCCCCCCCHHHHHHHHH
Q psy11975 425 QGLPVVAGQAHFAGAHPGPGVGQMMVSSVSFSHYFKAHSSTSMPIQKRKSLLR 477 (786)
Q Consensus 425 rkLpv~agka~faga~pg~~~~~~~~~~v~~~Gvf~agE~~sLT~dER~~Lle 477 (786)
.|.+. . ..-.++|-.|.+...|+.+||+++.-
T Consensus 97 ----------~~~~~-----~------~~~~~Ai~~A~~a~~~~~eeR~~~~~ 128 (134)
T 2gfu_A 97 ----------HFYSA-----K------PEILRAMQRADEALNKDKIKRLELAV 128 (134)
T ss_dssp ----------TTCCC-----C------HHHHHHHHHHHHHHSSCHHHHHTTTT
T ss_pred ----------cchhc-----c------HHHHHHHHHHHHHhcCCHHHHHHhhc
Confidence 01000 0 01124665688889999999987654
No 38
>3llr_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase, methylysine binding, STR genomics consortium, SGC, alternative promoter usage; HET: DNA BTB; 2.30A {Homo sapiens} SCOP: b.34.9.0
Probab=99.66 E-value=3.8e-17 Score=158.70 Aligned_cols=67 Identities=36% Similarity=0.712 Sum_probs=58.4
Q ss_pred ccCCCCCCCceEEEecccCCCCCccccCCCC------CCCcEEEEEeCCCCCcccccccccccccccchHHHhHh
Q psy11975 352 TKLLGLAEGDLVWGSVKGYPSWPGKLISPAP------TQGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHHRS 420 (786)
Q Consensus 352 ~~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~------~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~~~ 420 (786)
.+.+.|.+||||||||+|||||||+|+++.. ..++|+|+|||+++ ++||.+++|++|.++++.|++.
T Consensus 12 ~dg~~f~~GDLVWaKvkG~PwWPa~V~~~~~~~k~~~~~~~~~V~FFG~~~--~awv~~~~L~pf~e~~e~f~~~ 84 (154)
T 3llr_A 12 EDGRGFGIGELVWGKLRGFSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGK--FSVVCVEKLMPLSSFCSAFHQA 84 (154)
T ss_dssp CSSCCCCTTCEEEECCTTSCCEEEEEECGGGTTSCCCCTTEEEEEETTTCC--EEEEEGGGEEEGGGHHHHCCHH
T ss_pred ccCCCCccCCEEEEecCCCCCCCEEEecccccccccCCCCEEEEEEeCCCC--EEEEcHHHCcchhhhHHHHhhh
Confidence 3456899999999999999999999999752 24789999999995 5668999999999999999765
No 39
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=99.65 E-value=3e-17 Score=158.74 Aligned_cols=65 Identities=22% Similarity=0.467 Sum_probs=55.2
Q ss_pred cCCCCCCCceEEEecccCCCCCccccCCCCC-----CCcEEEEEeCCCCCcccccccccccccccchHHHhH
Q psy11975 353 KLLGLAEGDLVWGSVKGYPSWPGKLISPAPT-----QGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHHR 419 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~-----~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~~ 419 (786)
-.+.|.+||||||||+|||||||+|++++.. .++|+|+|||+++ ++||.+++|++|.+++++|.+
T Consensus 19 ~~~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~~--~awv~~~~l~~f~e~~~~~~k 88 (153)
T 4fu6_A 19 MTRDFKPGDLIFAKMKGYPHWPARVDEVPDGAVKPPTNKLPIFFFGTHE--TAFLGPKDIFPYSENKEKYGK 88 (153)
T ss_dssp SGGGCCTTCEEEECCTTSCCEEEEECCCC---CCCCTTCEEEEETTTCC--EEEECGGGEEEHHHHHHHHCS
T ss_pred cccCCCCCCEEEEeCCCCCCCCEEEeEchhhccCCCCCEEEEEecCCCC--eEEeCHHHccChHhHHHHHhc
Confidence 3467999999999999999999999997643 3689999999995 566899999999999888754
No 40
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=99.65 E-value=4.3e-17 Score=146.32 Aligned_cols=63 Identities=24% Similarity=0.478 Sum_probs=55.1
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCC-----CCcEEEEEeCCCCCcccccccccccccccchHHHhH
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPT-----QGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHHR 419 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~-----~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~~ 419 (786)
..|.+||||||||+|||||||+|++.++. .++++|+|||+++ ++||..++|++|.++++.|++
T Consensus 4 ~~f~~GdlVwaK~~g~p~WPa~V~~~~~~~~k~~~~~~~V~FFGt~~--~awv~~~~l~pf~~~~~~~~k 71 (94)
T 3qby_A 4 HAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHE--TAFLGPKDLFPYDKCKDKYGK 71 (94)
T ss_dssp CCCCTTCEEEECCTTSCCEEEEECCCCTTSBCCCTTCEEEEETTTCC--EEEECGGGEEEHHHHHHHHCS
T ss_pred CcCccCCEEEEecCCCCCCCEEEeecccccccCCCCEEEEEEEcCCC--cceEchhHeeEHHHHHHHHcc
Confidence 47999999999999999999999997642 3689999999995 566899999999998888764
No 41
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=99.61 E-value=7.5e-17 Score=148.61 Aligned_cols=65 Identities=25% Similarity=0.466 Sum_probs=55.6
Q ss_pred ccCCCCCCCceEEEecccCCCCCccccCCCCC-----CCcEEEEEeCCCCCcccccccccccccccchHHHh
Q psy11975 352 TKLLGLAEGDLVWGSVKGYPSWPGKLISPAPT-----QGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHH 418 (786)
Q Consensus 352 ~~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~-----~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~ 418 (786)
.....|.+||||||||+|||||||+|++.+.. .+.|+|+|||+++ ++||..++|++|.++.++|.
T Consensus 15 ~~~~~~~~GdlVwaK~kGyP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~~--~awv~~~~l~pf~~~~~k~~ 84 (110)
T 1ri0_A 15 NRQKEYKCGDLVFAKMKGYPHWPARIDEMPEAAVKSTANKYQVFFFGTHE--TAFLGPKDLFPYEESKEKFG 84 (110)
T ss_dssp CCSSSCCTTCEEEEEETTEEEEEEEEECCCSSSSCCCSSCEEEEETTTTE--EEEECSTTEECHHHHHHHCC
T ss_pred cccCCCCCCCEEEEEeCCCCCCCEEEecccHhhcCCCCCEEEEEEecCCC--EEEECHHHccchhhhHHHHc
Confidence 45668999999999999999999999986642 4689999999984 56789999999998777664
No 42
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=99.59 E-value=2.5e-16 Score=151.92 Aligned_cols=66 Identities=33% Similarity=0.663 Sum_probs=57.0
Q ss_pred ccCCCCCCCceEEEecccCCCCCccccCCCCC------CCcEEEEEeCCCCCcccccccccccccccchHHHhH
Q psy11975 352 TKLLGLAEGDLVWGSVKGYPSWPGKLISPAPT------QGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHHR 419 (786)
Q Consensus 352 ~~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~------~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~~ 419 (786)
...+.|.+||||||||+|||||||+|++++.. .+.|+|+|||+++ ++||.+++|++|.++.+.|.+
T Consensus 7 ~~~~~~~~GDlVWaKvkGyPwWPa~V~~~~~~~~~~~~~~~~~V~FFG~~~--~awv~~~~L~p~~~~~e~f~~ 78 (147)
T 1khc_A 7 QDDKEFGIGDLVWGKIKGFSWWPAMVVSWKATSKRQAMPGMRWVQWFGDGK--FSEISADKLVALGLFSQHFNL 78 (147)
T ss_dssp CSSSSCCTTCEEEEEETTTEEEEEEEECGGGTTSCCCCTTEEEEEETTTCC--EEEEEGGGCEETTSHHHHCCH
T ss_pred CCCccCcCCCEEEEecCCcCCCCEEeccchhhhcccCCCCeEEEEEecCCC--EEEEcHHHCccchHHHHHHhh
Confidence 34568999999999999999999999997642 3689999999995 677899999999999888764
No 43
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=99.59 E-value=2.9e-16 Score=143.94 Aligned_cols=64 Identities=20% Similarity=0.335 Sum_probs=54.5
Q ss_pred ccCCCCCCCceEEEecccCCCCCccccCCCC----------CCCcEEEEEeCCCCCcccccccccccccccchHHH
Q psy11975 352 TKLLGLAEGDLVWGSVKGYPSWPGKLISPAP----------TQGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAH 417 (786)
Q Consensus 352 ~~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~----------~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf 417 (786)
+..+.|.+||||||||+|||||||+|+++.. ..+.++|+|||++ .++||..++|++|.++.+.+
T Consensus 4 ~~g~~~~~GdlVwaK~~g~p~WPa~V~~~~~~p~~~~~~~~~~~~~~V~FFg~~--~~awv~~~~l~p~~~~~~~~ 77 (110)
T 2daq_A 4 GSSGKLHYKQIVWVKLGNYRWWPAEICNPRSVPLNIQGLKHDLGDFPVFFFGSH--DYYWVHQGRVFPYVEGDKSF 77 (110)
T ss_dssp SCCCSCCSSEEEEEECSSSCEEEEEECCTTTSCHHHHTSCCCSSCEEEEETTTT--EEEEECSSSSEECCSSCCSS
T ss_pred CCCCCCCCCCEEEEEeCCCCCCceeeCChhhCCHHHhhccCCCCcEEEEEecCC--CEEEEcHHHCcCcchhhHHH
Confidence 4567899999999999999999999999842 1368999999998 56778999999999986654
No 44
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=99.57 E-value=4.4e-16 Score=142.93 Aligned_cols=58 Identities=24% Similarity=0.269 Sum_probs=49.9
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCC----------CCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAP----------TQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~----------~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
...|.+||||||||+|||||||+|++++. ..+.|+|+|||++ .++||..++|++|.++
T Consensus 3 ~~~~~~GdlVwaK~~gyP~WPa~V~~~~~~p~~v~~~~~~~~~~~V~FFg~~--~~aWv~~~~l~p~~~~ 70 (108)
T 2l89_A 3 DDRLNFGDRILVKAPGYPWWPALLLRRKETKDSLNTNSSFNVLYKVLFFPDF--NFAWVKRNSVKPLLDS 70 (108)
T ss_dssp SCCCCTTEEEEEECSSSCEEEEEEEEEEEEESSSCSSSCEEEEEEEEETTTT--EEEEECGGGEEECCHH
T ss_pred CCcccCCCEEEEEeCCcCCCceEecCcccCcHHHhhccCCCCeEEEEECCCC--CEEEEchhhceeCCHH
Confidence 45799999999999999999999998641 1257999999998 5777899999999975
No 45
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=99.53 E-value=2.2e-15 Score=138.11 Aligned_cols=58 Identities=17% Similarity=0.281 Sum_probs=49.5
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCC----------C--CCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAP----------T--QGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~----------~--~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
...|.+||||||||+|||||||+|++++. . .+.|+|+|||+++ ++||..++|++|.++
T Consensus 4 ~~~~~~GdlVwaK~~gyP~WPa~V~~p~~~~~~~~~~~~~~~~~~~~V~FFg~~~--~aWv~~~~l~p~~~~ 73 (109)
T 1h3z_A 4 RVNYKPGMRVLTKMSGFPWWPSMVVTESKMTSVARKSKPKRAGTFYPVIFFPNKE--YLWTGSDSLTPLTSE 73 (109)
T ss_dssp CCCCCTTCEEEEEETTEEEEEEEECCGGGCCHHHHHTCCCSSSCEEEEEETTTTC--CEEEEGGGEEECCHH
T ss_pred cccCCCCCEEEEEeCCcCCCCEEEcccHHHhHHhhccCCCCCCCEEEEEEcCCCC--EEEECHHHeeeCCch
Confidence 45799999999999999999999996421 1 4689999999995 677899999999875
No 46
>3l42_A Peregrin; transcription regulation, histone H3 acetylation, chromatin modification, structural genomics, structural genomics CONS SGC, activator; 1.30A {Homo sapiens} PDB: 3mo8_A* 2x4w_A* 2x35_A* 2x4x_A* 2x4y_A*
Probab=99.49 E-value=1.8e-14 Score=136.14 Aligned_cols=61 Identities=26% Similarity=0.441 Sum_probs=51.3
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCC------------------------------CCcEEEEEeCCCCCccccccc
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPT------------------------------QGRVWVKWFGMSNEPLSEVEP 404 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~------------------------------~g~~~V~fFG~~~~a~s~V~~ 404 (786)
..|.+|||||||++|||||||+|+++... ...|+|+|||+.. .|+||..
T Consensus 4 ~~~~~~dlVWAK~~gyP~wPa~Iidp~~p~~g~~~~g~~ip~pP~~Vl~~~~~~~~~~~~~~y~V~FFd~~~-t~aWv~~ 82 (130)
T 3l42_A 4 SPLDALDLVWAKCRGYPSYPALIIDPKMPREGMFHHGVPIPVPPLEVLKLGEQMTQEAREHLYLVLFFDNKR-TWQWLPR 82 (130)
T ss_dssp SSSCTTCEEEECCTTSCCEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHCSSCEEEEEESSTTC-CEEEEEG
T ss_pred ccCCCCCEEEEecccCCCCCEEEcCCCCccccccccCccCCCChHHHHhhcccccccCCCcEEEEEeCCCCC-ceEeecc
Confidence 46999999999999999999999997521 2468999999743 7999999
Q ss_pred ccccccccchHH
Q psy11975 405 ATLKSLSQGLEA 416 (786)
Q Consensus 405 k~LkpFsEglEa 416 (786)
++|++|.+..+.
T Consensus 83 ~~i~pl~~d~~~ 94 (130)
T 3l42_A 83 TKLVPLGVNQDL 94 (130)
T ss_dssp GGEEESSSCHHH
T ss_pred cceeecCCchhh
Confidence 999999886543
No 47
>3pfs_A Bromodomain and PHD finger-containing protein 3; structural genomics, structural genomics consortium, SGC, PW domain, protein binding; 1.90A {Homo sapiens} PDB: 3lyi_A*
Probab=99.47 E-value=2.7e-14 Score=138.95 Aligned_cols=61 Identities=23% Similarity=0.368 Sum_probs=51.5
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCC------------------------------CCCcEEEEEeCCCCCcccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAP------------------------------TQGRVWVKWFGMSNEPLSEVE 403 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~------------------------------~~g~~~V~fFG~~~~a~s~V~ 403 (786)
...|.+|||||||++|||||||+|+++.. ..+.|+|+|||+.. .|+||.
T Consensus 34 ~~~~~pgdlVWAK~~GyPwwPa~Iidp~~p~~g~~~~~v~ip~pP~~Vlk~~~~~~~~~~~~~ylV~FFd~~~-t~aWV~ 112 (158)
T 3pfs_A 34 RGDLEPLELVWAKCRGYPSYPALIIDPKMPREGLLHNGVPIPVPPLDVLKLGEQKQAEAGEKLFLVLFFDNKR-TWQWLP 112 (158)
T ss_dssp CSCCCTTCEEEEECTTSCEEEEEEECTTSCTTCEEETTEEECCCCHHHHHHHHHHHHHHTSCEEEEEECSTTC-CEEEEE
T ss_pred CCCCCCCCEEEEecCCCCCCCEEEcCCCCccccccccccccCCChHHHHhhcccccccCCCCEEEEEEcCCCC-ceEeec
Confidence 35799999999999999999999999654 13468999999743 689999
Q ss_pred cccccccccchH
Q psy11975 404 PATLKSLSQGLE 415 (786)
Q Consensus 404 ~k~LkpFsEglE 415 (786)
.++|++|.+..+
T Consensus 113 ~~~L~Pl~~d~~ 124 (158)
T 3pfs_A 113 RDKVLPLGVEDT 124 (158)
T ss_dssp GGGEEECSSCHH
T ss_pred cccEeecCCchh
Confidence 999999987653
No 48
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.0054 Score=65.91 Aligned_cols=235 Identities=12% Similarity=0.023 Sum_probs=148.8
Q ss_pred CeEEEeCCC--------CCHHHHH----HHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-
Q psy11975 515 ADLLKPQKH--------TTTRATI----DLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN- 581 (786)
Q Consensus 515 VPVIaGVGa--------~ST~EAI----ELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi- 581 (786)
..|.+|+|. .++++++ |.....++.|+..|+...=...+..-++|+..+-|..|.+.++-||||.-.
T Consensus 113 ~~ia~G~GTDqL~~~~~~~l~~V~~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~~pdDY~~VY~~vL~q~~~PVILHWLG 192 (396)
T 4dnh_A 113 ALIACGAGTDHLAPGPDVSIDDILAAYESQIEAIEAEGGRIILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVIIHWLG 192 (396)
T ss_dssp CCEEEEECCTTSCCCTTCCHHHHHHHHHHHHHHHHHTTCCEEECCCHHHHHHCCSHHHHHHHHHHHHHHCSSCEEEEEEC
T ss_pred CeeeeccCcCCCCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEehhHHHHHHhCCHHHHHHHHHHHHHhcCCCEEEEecc
Confidence 346667762 1455554 456777889999877665433322125899999999999999999999875
Q ss_pred ----CCCcCCc----c--CHHHHHHHH-hC-CCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeCCcchhhhhhccCCc--
Q psy11975 582 ----TFVTNID----I--SVDTLVKLA-HH-ENIRGVKDT--DNIKLANMANQTKDLNFSVFAGSAGYLLSGLLVGCA-- 645 (786)
Q Consensus 582 ----P~~TGv~----L--SpelL~rLA-ei-PNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G~DelLL~aL~~GAd-- 645 (786)
|...|+. + -.+++.+|. ++ ..|-|||.| |..+-..+.+ .....+++|+|+|-.+.+...--..
T Consensus 193 ~mFDPaL~GYWGs~d~~~A~~t~l~lI~~~~~kVDGIKiSLLDa~~Ei~lRr-rLP~gVrmYTGDDFnYpELI~GD~~g~ 271 (396)
T 4dnh_A 193 EMFDPALEGYWGNADHMAAMKTCLDVLEAHAAKVDGIKISLLSKEKEIVMRR-QLPKGVRMYTGDDFNYAELIAGDEEGH 271 (396)
T ss_dssp TTTCGGGTTTTSCSSHHHHHHHHHHHHHHTGGGEEEEEEESCCHHHHHHHHT-SCCTTCEEEECCTTTHHHHHHCCSSCC
T ss_pred cccChhhccccCCCCHHHHHHHHHHHHHhChhhcCceEEeeeccHhHHHHHH-hCCCcceeecCCCCCcHHHhcCCCCCc
Confidence 4444442 2 245667776 44 789999999 9887777766 4678899999998655544432233
Q ss_pred --cccccccccccHHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHhhhhccccCHHHHHHHHHHcCCCCCCCCC-CCCC
Q psy11975 646 --GGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRNVLLMKEMGVPGVRAAMELYGYYGGRSRR-PLPA 722 (786)
Q Consensus 646 --G~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~~~~~~~~~ia~lKaaL~lrGI~~G~vR~-PL~~ 722 (786)
..++.+.-+.| ...+-.+++.+||.++.+++.+.-.+|-+.+. ..-..++-.++-.+..+.|.-...... =++-
T Consensus 272 ShALLGIFdaIaP-aAs~Al~aLd~Gd~~~f~~iL~PTvpLsRhiF--~aPT~~YKTGVvFLAwLnGhQ~hF~MvgG~qs 348 (396)
T 4dnh_A 272 SDALLGIFDAIAP-VASAALEALGSGRNGEFFELLEPTVPLSRHIF--KAPTRFYKTGVVFLAYLNGLQDHFVMIGGQQS 348 (396)
T ss_dssp CEEEESHHHHTHH-HHHHHHHHHHTTCHHHHHHHHTTHHHHHHHHT--CSSGGGHHHHHHHHHHHTTSSSCCCCGGGGGG
T ss_pred cHHHHhhhhhccH-HHHHHHHHHhCCCHHHHHHHhcCcchhhhhhh--cCCchhhhhhHHHHHHHcCCCccceecCcccc
Confidence 33444444444 45556778889999999999988888887761 001122223333333455653221100 0110
Q ss_pred CCCHHHHHHHHHHHHHcCCCCccchhchhhh
Q psy11975 723 ALKPGGAEKIKQVLTEAGFLVPGVRAAMELY 753 (786)
Q Consensus 723 pLseeekaeL~~~L~~lGll~~~~~~~~~~~ 753 (786)
.=+-....++-++..++|++.....+.-+|-
T Consensus 349 aRs~~Hla~~frLAD~agll~dPelA~~RM~ 379 (396)
T 4dnh_A 349 ARSLVHLAELFRLADKAGALADPELATARMR 379 (396)
T ss_dssp SSCHHHHHHHHHHHHHTTCCSSHHHHHHHHH
T ss_pred ccchHHHHHHHHHHhhhCCCCCHHHHHHHHH
Confidence 1134567888888899999886554444443
No 49
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=96.90 E-value=0.0019 Score=66.30 Aligned_cols=136 Identities=14% Similarity=0.111 Sum_probs=90.0
Q ss_pred cCCCCeEEEeCCCCCH-------HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEEe
Q psy11975 511 REWQADLLKPQKHTTT-------RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS---PIPVIIYN 580 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST-------~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt---dLPIiLYN 580 (786)
..+++|+++++.+.+. +..++.++.|.++|||.|.+.. ++... +.+++++..++|.+.+ ++|+++..
T Consensus 76 ~~~~~~~~v~~~~~~~~~~d~~~~~~~~~v~~a~~~Ga~~v~~~l-~~~~~--~~~~~~~~~~~v~~~~~~~g~~viv~~ 152 (273)
T 2qjg_A 76 YGKDVGLIIHLSGGTAISPNPLKKVIVTTVEEAIRMGADAVSIHV-NVGSD--EDWEAYRDLGMIAETCEYWGMPLIAMM 152 (273)
T ss_dssp SSCCCEEEEECEECCTTSSSTTCCEECSCHHHHHHTTCSEEEEEE-EETST--THHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hcCCCCEEEEEcCCCcCCCCcccchHHHHHHHHHHcCCCEEEEEE-ecCCC--CHHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3468899998876541 2236778889999999994421 11122 3777777777776664 89999986
Q ss_pred CCCCcCCc----cCHHHHHHH---H-hC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcc-h-------hhhhhcc
Q psy11975 581 NTFVTNID----ISVDTLVKL---A-HH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAG-Y-------LLSGLLV 642 (786)
Q Consensus 581 iP~~TGv~----LSpelL~rL---A-ei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~De-l-------LL~aL~~ 642 (786)
.+ .|.. ++.+.+.++ + +. ..++++... ++..+.++.+. .+-.+....|-.. . +..++..
T Consensus 153 ~~--~G~~l~~~~~~~~~~~~a~~a~~~Gad~i~~~~~~~~~~l~~i~~~-~~ipvva~GGi~~~~~~~~~~~~~~~~~~ 229 (273)
T 2qjg_A 153 YP--RGKHIQNERDPELVAHAARLGAELGADIVKTSYTGDIDSFRDVVKG-CPAPVVVAGGPKTNTDEEFLQMIKDAMEA 229 (273)
T ss_dssp EE--CSTTCSCTTCHHHHHHHHHHHHHTTCSEEEECCCSSHHHHHHHHHH-CSSCEEEECCSCCSSHHHHHHHHHHHHHH
T ss_pred CC--CCcccCCCCCHhHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHh-CCCCEEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 54 2444 566665544 3 22 568888777 99998888763 3445666666652 2 4455679
Q ss_pred CCcccccccc
Q psy11975 643 GCAGGINALS 652 (786)
Q Consensus 643 GAdG~Isg~a 652 (786)
|++|+..+.+
T Consensus 230 Ga~gv~vg~~ 239 (273)
T 2qjg_A 230 GAAGVAVGRN 239 (273)
T ss_dssp TCSEEECCHH
T ss_pred CCcEEEeeHH
Confidence 9999887754
No 50
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=96.29 E-value=0.065 Score=56.07 Aligned_cols=144 Identities=6% Similarity=-0.025 Sum_probs=91.9
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCC-EEEEcC--CCCCC---CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGAN-AALILC--PYYFQ---KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNI 587 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGAD-AVmViP--PyY~k---ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv 587 (786)
..|+++++++.+.++..+.++.++++|+| +|-+-- |..-. ...+.+.+.+..++|.+++++||++==.|.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~~~---- 168 (311)
T 1jub_A 93 EGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPY---- 168 (311)
T ss_dssp SSCCEEEECCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC----
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhcCCCEEEEECCC----
Confidence 46899999999999999999999999999 887732 44311 001478889999999988899999865443
Q ss_pred ccCHHHHHH---HHhCCCEEEEEeC-----------------------------------CHHHHHHHHhhcCCCCEEEE
Q psy11975 588 DISVDTLVK---LAHHENIRGVKDT-----------------------------------DNIKLANMANQTKDLNFSVF 629 (786)
Q Consensus 588 ~LSpelL~r---LAeiPNVVGIKDS-----------------------------------Dl~ri~~ll~~~~~~df~Vf 629 (786)
++.+.+.+ +++--.+-||.-+ ++..+.++.+ ..++++.|+
T Consensus 169 -~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~-~~~~~ipvi 246 (311)
T 1jub_A 169 -FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYT-RLKPEIQII 246 (311)
T ss_dssp -CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHT-TSCTTSEEE
T ss_pred -CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHH-hcCCCCCEE
Confidence 35555433 3321123222111 1233344433 333366655
Q ss_pred eCCc----chhhhhhccCCccccccccccc--cHHHHHHH
Q psy11975 630 AGSA----GYLLSGLLVGCAGGINALSAVL--GGPICELY 663 (786)
Q Consensus 630 ~G~D----elLL~aL~~GAdG~Isg~aN~~--Pel~vaL~ 663 (786)
...+ +.....+..||++++.+.+.+. |+++.++.
T Consensus 247 ~~GGI~~~~da~~~l~~GAd~V~vg~~~l~~~p~~~~~i~ 286 (311)
T 1jub_A 247 GTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRII 286 (311)
T ss_dssp EESSCCSHHHHHHHHHHTCSEEEECHHHHHHCTHHHHHHH
T ss_pred EECCCCCHHHHHHHHHcCCCEEEEchHHHhcCcHHHHHHH
Confidence 4433 2356677899999999988764 55544443
No 51
>3pmi_A PWWP domain-containing protein MUM1; structural genomics consortium, SGC, protein binding, nucLeu; HET: UNL; 2.82A {Homo sapiens}
Probab=95.60 E-value=0.0071 Score=56.95 Aligned_cols=57 Identities=25% Similarity=0.327 Sum_probs=46.0
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCC---Ccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSN---EPLSEVEPATLKSLS 411 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~---~a~s~V~~k~LkpFs 411 (786)
+.|+.|=|||-|..-||.|||.|-+.....++..|-|--.+- ..=..|....||+|.
T Consensus 3 ~~~e~GmlVW~K~q~yPfWPAVVKSV~r~ekkA~VL~Ie~~m~~ekrGi~V~LrrLK~fD 62 (134)
T 3pmi_A 3 RSFEVGMLVWHKHKKYPFWPAVVKSVRQRDKKASVLYIEGHMNPKMKGFTVSLKSLKHFD 62 (134)
T ss_dssp -CCCTTCEEEECCTTSCCEEEEEEEEEGGGTEEEEEECCSSCCTTSCCEEEEGGGCEETT
T ss_pred cccccceEEEEEeccCCCcchheeeeeeccceEEEEEEeCCCCcccCceEeEcccCCCCC
Confidence 579999999999999999999998877667888899987662 111237889999996
No 52
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=95.53 E-value=0.2 Score=51.82 Aligned_cols=63 Identities=14% Similarity=0.156 Sum_probs=49.6
Q ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC----------------CCCHHHHHHHHHHHHhcC-CCCEEE--Ee
Q psy11975 520 PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQK----------------KMTEDLIYEHFISVADNS-PIPVII--YN 580 (786)
Q Consensus 520 GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kp----------------s~S~eeLv~YFraIAeAt-dLPIiL--YN 580 (786)
-.|..+.+++++.++..++.|+|++.+-.|+.-.. +++.+.+.+..++|.+.+ ++|+++ |.
T Consensus 24 ~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~ 103 (262)
T 2ekc_A 24 MVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYY 103 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCH
T ss_pred cCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecC
Confidence 48889999999999999999999999999884211 122345667788888888 899998 66
Q ss_pred CC
Q psy11975 581 NT 582 (786)
Q Consensus 581 iP 582 (786)
+|
T Consensus 104 n~ 105 (262)
T 2ekc_A 104 NP 105 (262)
T ss_dssp HH
T ss_pred cH
Confidence 55
No 53
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=95.33 E-value=0.6 Score=50.74 Aligned_cols=142 Identities=11% Similarity=0.092 Sum_probs=91.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHH---HcCCCEEEEc--CCCCC---CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAA---KAGANAALIL--CPYYF---QKKMTEDLIYEHFISVADNSPIPVIIYNNTFVT 585 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae---~aGADAVmVi--PPyY~---kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~T 585 (786)
+.|||+++.+.+.+|-++.|+.++ +.|+|++-+= .|..- ....+.+.+.+..++|.+++++||++=--|.
T Consensus 126 ~~pvivsI~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~~~PV~vKi~p~-- 203 (354)
T 4ef8_A 126 KKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPY-- 203 (354)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHCCSCEEEEECCC--
T ss_pred CCcEEEEeccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhhCCCeEEEecCC--
Confidence 369999999999999999999998 6799998763 23321 0101468899999999999999999988775
Q ss_pred CCccCHHHHHHHH----hCCCEEEEE-----------e-----------------C-------CHHHHHHHHhhcCCCCE
Q psy11975 586 NIDISVDTLVKLA----HHENIRGVK-----------D-----------------T-------DNIKLANMANQTKDLNF 626 (786)
Q Consensus 586 Gv~LSpelL~rLA----eiPNVVGIK-----------D-----------------S-------Dl~ri~~ll~~~~~~df 626 (786)
++.+.+.+++ +.+.+-||- | + ++..+.++.+ . .+++
T Consensus 204 ---~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~-~-~~~i 278 (354)
T 4ef8_A 204 ---FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYR-R-CPGK 278 (354)
T ss_dssp ---CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHH-H-CTTS
T ss_pred ---CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHH-h-CCCC
Confidence 3455555554 333244432 1 1 1233444444 2 3455
Q ss_pred EEE-eCC-c--chhhhhhccCCccccccccccc--cHHHHHH
Q psy11975 627 SVF-AGS-A--GYLLSGLLVGCAGGINALSAVL--GGPICEL 662 (786)
Q Consensus 627 ~Vf-~G~-D--elLL~aL~~GAdG~Isg~aN~~--Pel~vaL 662 (786)
.|+ +|. . +.....+.+||++++.+.+.++ |.++.+|
T Consensus 279 pII~~GGI~s~~da~~~l~aGAd~V~vgra~l~~GP~~~~~i 320 (354)
T 4ef8_A 279 LIFGCGGVYTGEDAFLHVLAGASMVQVGTALQEEGPSIFERL 320 (354)
T ss_dssp EEEEESCCCSHHHHHHHHHHTEEEEEECHHHHHHCTTHHHHH
T ss_pred CEEEECCcCCHHHHHHHHHcCCCEEEEhHHHHHhCHHHHHHH
Confidence 544 333 1 2356678899999999887653 4444333
No 54
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=95.22 E-value=0.21 Score=52.32 Aligned_cols=134 Identities=8% Similarity=0.012 Sum_probs=88.4
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCC---EEEEcC--CCCCC---CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGAN---AALILC--PYYFQ---KKMTEDLIYEHFISVADNSPIPVIIYNNTFVT 585 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGAD---AVmViP--PyY~k---ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~T 585 (786)
..||++++++.+.++..+.++.++++|+| +|-+-. |..-. ...+.+.+.+..++|.+++++||++=-.|.
T Consensus 93 ~~p~~~~i~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~~~~-- 170 (314)
T 2e6f_A 93 KKPLFLSISGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKMPPY-- 170 (314)
T ss_dssp TCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEECCC--
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC--
Confidence 46899999999999999999999999999 776632 33311 001477788899999888899999865443
Q ss_pred CCccCHHHHHHHH---hCCC-EEEEEeC-----------------------------------CHHHHHHHHhhcCCCCE
Q psy11975 586 NIDISVDTLVKLA---HHEN-IRGVKDT-----------------------------------DNIKLANMANQTKDLNF 626 (786)
Q Consensus 586 Gv~LSpelL~rLA---eiPN-VVGIKDS-----------------------------------Dl~ri~~ll~~~~~~df 626 (786)
++.+.+.+++ .--. +-+|.-+ .+..+.++.+ .. +++
T Consensus 171 ---~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~-~~-~~i 245 (314)
T 2e6f_A 171 ---FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYR-RC-PDK 245 (314)
T ss_dssp ---CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHH-HC-TTS
T ss_pred ---CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHH-hc-CCC
Confidence 4556654444 2223 5555311 1344444444 23 456
Q ss_pred EEEeCCc----chhhhhhccCCcccccccccc
Q psy11975 627 SVFAGSA----GYLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 627 ~Vf~G~D----elLL~aL~~GAdG~Isg~aN~ 654 (786)
.|+...+ +.....+..||++++.+.+.+
T Consensus 246 pvi~~GGI~~~~da~~~l~~GAd~V~ig~~~l 277 (314)
T 2e6f_A 246 LVFGCGGVYSGEDAFLHILAGASMVQVGTALQ 277 (314)
T ss_dssp EEEEESSCCSHHHHHHHHHHTCSSEEECHHHH
T ss_pred CEEEECCCCCHHHHHHHHHcCCCEEEEchhhH
Confidence 6544332 236667889999999888765
No 55
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=94.87 E-value=0.12 Score=54.90 Aligned_cols=160 Identities=9% Similarity=0.065 Sum_probs=90.4
Q ss_pred CCeEEEeCCCCCH-------HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEEeCCC
Q psy11975 514 QADLLKPQKHTTT-------RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS---PIPVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGVGa~ST-------~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt---dLPIiLYNiP~ 583 (786)
++++|+.+.+.+. +....-++.|.++|||+|.+.- |.... .+++.++-+.++.+++ ++|+|+-. +.
T Consensus 105 ~~~lil~l~~~t~~~~~~~~~~l~~~ve~Av~~GAdaV~~~i--~~Gs~-~~~~~l~~i~~v~~~a~~~GlpvIie~-~~ 180 (295)
T 3glc_A 105 NRPVVLRASGANSILAELSNEAVALSMDDAVRLNSCAVAAQV--YIGSE-YEHQSIKNIIQLVDAGMKVGMPTMAVT-GV 180 (295)
T ss_dssp CCCEEEECEECCCTTSCTTCCEECSCHHHHHHTTCSEEEEEE--CTTST-THHHHHHHHHHHHHHHHTTTCCEEEEE-CC
T ss_pred CccEEEEEcCCCcCCCCCccchhHHHHHHHHHCCCCEEEEEE--ECCCC-cHHHHHHHHHHHHHHHHHcCCEEEEEC-CC
Confidence 6788887765431 1112346778899999998863 33332 4677777676666655 79999843 22
Q ss_pred CcCCccCHHHHH---HHH-hC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcc-------hhhhhhccCCcccccc
Q psy11975 584 VTNIDISVDTLV---KLA-HH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAG-------YLLSGLLVGCAGGINA 650 (786)
Q Consensus 584 ~TGv~LSpelL~---rLA-ei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~De-------lLL~aL~~GAdG~Isg 650 (786)
-.....+++.+. +++ +. ..++..+++ + .+.++++ ...-.+.+..|... ++..++.+|++|++.|
T Consensus 181 G~~~~~d~e~i~~aariA~elGAD~VKt~~t~e--~~~~vv~-~~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vG 257 (295)
T 3glc_A 181 GKDMVRDQRYFSLATRIAAEMGAQIIKTYYVEK--GFERIVA-GCPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMG 257 (295)
T ss_dssp ----CCSHHHHHHHHHHHHHTTCSEEEEECCTT--THHHHHH-TCSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEES
T ss_pred CCccCCCHHHHHHHHHHHHHhCCCEEEeCCCHH--HHHHHHH-hCCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeH
Confidence 112234566544 555 44 467777777 2 2344444 22333544444321 3446778999999999
Q ss_pred ccccccHHHHHHHHHH----Hc-CCHHHHHHHHHH
Q psy11975 651 LSAVLGGPICELYDLA----KA-GKWEEAMKLQHR 680 (786)
Q Consensus 651 ~aN~~Pel~vaL~eA~----~a-GD~eeAreLQ~r 680 (786)
-.-+.++--.++.+++ .+ -..++|.+++..
T Consensus 258 RnI~q~~dp~~~~~al~~ivh~~~s~~eA~~~~~~ 292 (295)
T 3glc_A 258 RNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLS 292 (295)
T ss_dssp HHHHTSSSHHHHHHHHHHHHHHCCCHHHHHHHHHT
T ss_pred HHHhcCcCHHHHHHHHHHHHhCCCCHHHHHHHHHh
Confidence 7655333333333333 22 346777666543
No 56
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=94.75 E-value=1 Score=48.63 Aligned_cols=133 Identities=8% Similarity=-0.009 Sum_probs=88.3
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCC-EEEEc--CCCCC---CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGAN-AALIL--CPYYF---QKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNI 587 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGAD-AVmVi--PPyY~---kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv 587 (786)
+.||++++++.+.+|-++.++.++++|+| ++-+- .|.-- ....+.+.+.+..++|.+++++||++==-|.
T Consensus 128 ~~pvivsI~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~~~PV~vKi~p~---- 203 (345)
T 3oix_A 128 SKNHFLSLVGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYFTKPLGIKLPPY---- 203 (345)
T ss_dssp CCCCEEEECCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTCCSCEEEEECCC----
T ss_pred CCCEEEEecCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHhCCCeEEEECCC----
Confidence 46999999999999999999999999988 66543 23211 0101478899999999999999999988774
Q ss_pred ccCHHHHHHHHh---CCCEEEE------------E--------------eC---C----HHHHHHHHhhcCCCCEEEEeC
Q psy11975 588 DISVDTLVKLAH---HENIRGV------------K--------------DT---D----NIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 588 ~LSpelL~rLAe---iPNVVGI------------K--------------DS---D----l~ri~~ll~~~~~~df~Vf~G 631 (786)
++.+.++++++ ...|.+| . .+ . +..+.++.+ ..++++.|+..
T Consensus 204 -~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~-~~~~~ipIIg~ 281 (345)
T 3oix_A 204 -FDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYK-RLNPSIQIIGT 281 (345)
T ss_dssp -CCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHT-TSCTTSEEEEE
T ss_pred -CCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHH-HcCCCCcEEEE
Confidence 46777777662 2333221 1 11 1 233444433 33445665433
Q ss_pred Cc----chhhhhhccCCcccccccc
Q psy11975 632 SA----GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 632 ~D----elLL~aL~~GAdG~Isg~a 652 (786)
.+ +.....+..||++++.+.+
T Consensus 282 GGI~s~~da~~~l~aGAd~V~igra 306 (345)
T 3oix_A 282 GGVXTGRDAFEHILCGASMVQIGTA 306 (345)
T ss_dssp SSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred CCCCChHHHHHHHHhCCCEEEEChH
Confidence 22 2356778899999988876
No 57
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=93.98 E-value=0.67 Score=48.00 Aligned_cols=119 Identities=13% Similarity=0.096 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEEeCCCCcCCcc----CHHHHHHH---
Q psy11975 528 ATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS---PIPVIIYNNTFVTNIDI----SVDTLVKL--- 597 (786)
Q Consensus 528 EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt---dLPIiLYNiP~~TGv~L----SpelL~rL--- 597 (786)
.-+..++.|.+.|||+|.+.- |++.. +.+++++..++|.+++ ++|+++-.++ -|.++ +++.+.+.
T Consensus 93 ~~~~~ve~Ai~~Ga~~v~~~~--nig~~-~~~~~~~~~~~v~~~~~~~~~~vIi~~~~--~G~~~~~~~s~~~i~~a~~~ 167 (263)
T 1w8s_A 93 VANCSVEEAVSLGASAVGYTI--YPGSG-FEWKMFEELARIKRDAVKFDLPLVVESFP--RGGKVVNETAPEIVAYAARI 167 (263)
T ss_dssp EESSCHHHHHHTTCSEEEEEE--CTTST-THHHHHHHHHHHHHHHHHHTCCEEEEECC--CSTTCCCTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHCCCCEEEEEE--ecCCc-CHHHHHHHHHHHHHHHHHcCCeEEEEeeC--CCCccccCCCHHHHHHHHHH
Confidence 334567888889999998864 33432 5788888888888766 7999886555 24444 67777554
Q ss_pred H-hC-CCEEEEEeC-CHHHHHHHHhhcCCC-CEEEEeCCc--c------hhhhhhccCCcccccccc
Q psy11975 598 A-HH-ENIRGVKDT-DNIKLANMANQTKDL-NFSVFAGSA--G------YLLSGLLVGCAGGINALS 652 (786)
Q Consensus 598 A-ei-PNVVGIKDS-Dl~ri~~ll~~~~~~-df~Vf~G~D--e------lLL~aL~~GAdG~Isg~a 652 (786)
+ +. ..++++..+ +++.++++.+. .+. .+....|-. . ++..++..|++|...+-+
T Consensus 168 a~~~GAD~vkt~~~~~~e~~~~~~~~-~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgra 233 (263)
T 1w8s_A 168 ALELGADAMKIKYTGDPKTFSWAVKV-AGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRN 233 (263)
T ss_dssp HHHHTCSEEEEECCSSHHHHHHHHHH-TTTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHH
T ss_pred HHHcCCCEEEEcCCCCHHHHHHHHHh-CCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehh
Confidence 4 22 567777766 88888887763 333 466666654 1 334455899998887754
No 58
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=93.63 E-value=0.2 Score=54.43 Aligned_cols=143 Identities=13% Similarity=0.118 Sum_probs=91.3
Q ss_pred CCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Q psy11975 466 SMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDLTQKAAKAGANAAL 545 (786)
Q Consensus 466 sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVm 545 (786)
.++.++..+.++. ..+ .+++||.++++... .+.++.+.++|+|.|.
T Consensus 77 ~~s~e~~~~~I~~---vk~---------------------------~~~~pvga~ig~~~----~e~a~~l~eaGad~I~ 122 (361)
T 3khj_A 77 NMDMESQVNEVLK---VKN---------------------------SGGLRVGAAIGVNE----IERAKLLVEAGVDVIV 122 (361)
T ss_dssp SSCHHHHHHHHHH---HHH---------------------------TTCCCCEEEECTTC----HHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHH---HHh---------------------------ccCceEEEEeCCCH----HHHHHHHHHcCcCeEE
Confidence 6889988888876 221 24678888877655 7888899999999888
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC----------------
Q psy11975 546 ILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT---------------- 609 (786)
Q Consensus 546 ViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS---------------- 609 (786)
+-...- ..+.+.+..++|.+..++||++-|. .+++...+|.+. .+-+||-.
T Consensus 123 ld~a~G-----~~~~~~~~i~~i~~~~~~~Vivg~v-------~t~e~A~~l~~a-GaD~I~VG~~~Gs~~~tr~~~g~g 189 (361)
T 3khj_A 123 LDSAHG-----HSLNIIRTLKEIKSKMNIDVIVGNV-------VTEEATKELIEN-GADGIKVGIGPGSICTTRIVAGVG 189 (361)
T ss_dssp ECCSCC-----SBHHHHHHHHHHHHHCCCEEEEEEE-------CSHHHHHHHHHT-TCSEEEECSSCCTTCCHHHHTCBC
T ss_pred EeCCCC-----CcHHHHHHHHHHHHhcCCcEEEccC-------CCHHHHHHHHHc-CcCEEEEecCCCcCCCcccccCCC
Confidence 754431 2456777888888878999998553 467777777753 22233321
Q ss_pred --CHHHHHHHHhhcCCCCEEEEe--CC-c-chhhhhhccCCccccccccccc
Q psy11975 610 --DNIKLANMANQTKDLNFSVFA--GS-A-GYLLSGLLVGCAGGINALSAVL 655 (786)
Q Consensus 610 --Dl~ri~~ll~~~~~~df~Vf~--G~-D-elLL~aL~~GAdG~Isg~aN~~ 655 (786)
++..+.++.+.....++.|+. |- + +.+..++.+|++|++.|.+.+.
T Consensus 190 ~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~~~~ 241 (361)
T 3khj_A 190 VPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIGSILAG 241 (361)
T ss_dssp CCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEEESTTTTT
T ss_pred CCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEEEChhhhc
Confidence 233333332211111344444 33 2 3467789999999998876553
No 59
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=93.32 E-value=0.69 Score=50.89 Aligned_cols=93 Identities=12% Similarity=0.019 Sum_probs=61.5
Q ss_pred CCCeEEEe-CCCCCHHHHHHHHHHHHHcCCCEEEEcC------CCCCCCCCCHHHHHHHHHHHHhcCCCCEEE-------
Q psy11975 513 WQADLLKP-QKHTTTRATIDLTQKAAKAGANAALILC------PYYFQKKMTEDLIYEHFISVADNSPIPVII------- 578 (786)
Q Consensus 513 GRVPVIaG-VGa~ST~EAIELAr~Ae~aGADAVmViP------PyY~kps~S~eeLv~YFraIAeAtdLPIiL------- 578 (786)
++..+|+| ++.++.+.+.++|+.++++|||+|-... |+.|.- +..+++ ..+.++++..++|++-
T Consensus 141 ~~~~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~g-l~~egl-~~L~~~~~~~Gl~~~te~~d~~~ 218 (385)
T 3nvt_A 141 GEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQG-LGLEGL-KILKRVSDEYGLGVISEIVTPAD 218 (385)
T ss_dssp SSCEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCC-CTHHHH-HHHHHHHHHHTCEEEEECCSGGG
T ss_pred CCeEEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcC-CCHHHH-HHHHHHHHHcCCEEEEecCCHHH
Confidence 45567776 5667999999999999999999887654 443332 235554 6777788888898873
Q ss_pred ----------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 ----------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 ----------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|.+|++. .-..+++.++++...-+.+|-.
T Consensus 219 ~~~l~~~vd~lkIgs~~--~~n~~LL~~~a~~gkPVilk~G 257 (385)
T 3nvt_A 219 IEVALDYVDVIQIGARN--MQNFELLKAAGRVDKPILLKRG 257 (385)
T ss_dssp HHHHTTTCSEEEECGGG--TTCHHHHHHHHTSSSCEEEECC
T ss_pred HHHHHhhCCEEEECccc--ccCHHHHHHHHccCCcEEEecC
Confidence 3444322 1224555666666666666665
No 60
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=93.25 E-value=0.41 Score=51.74 Aligned_cols=117 Identities=13% Similarity=0.152 Sum_probs=73.1
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCH---HHHHHHHHHHHhcC---CCCEEE--EeCCCCcCCccC-------HHHHHHH
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTE---DLIYEHFISVADNS---PIPVII--YNNTFVTNIDIS-------VDTLVKL 597 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~---eeLv~YFraIAeAt---dLPIiL--YNiP~~TGv~LS-------pelL~rL 597 (786)
+++|.++|||||-++- |+.+...+ ++..+++++|++++ ++|+++ +-+|..-+...+ ++.+...
T Consensus 116 ve~a~~~GADAVk~lv--~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~a 193 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLL--YYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKVHKVNDA 193 (332)
T ss_dssp HHHHHHTTCSEEEEEE--EECTTSCHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHHH
T ss_pred HHHHHHcCCCEEEEEE--EcCCCchHHHHHHHHHHHHHHHHHHHHcCCceEEEEeccCCCCCCCcchhhhccCHHHHHHH
Confidence 6788899999999985 44554122 25678888888877 899998 555542223333 4445544
Q ss_pred Hh-------CCCEEEEEeC-CH-------------------HHHHHHHhhcCCCCEEEEeCCc--chhh----hhhccCC
Q psy11975 598 AH-------HENIRGVKDT-DN-------------------IKLANMANQTKDLNFSVFAGSA--GYLL----SGLLVGC 644 (786)
Q Consensus 598 Ae-------iPNVVGIKDS-Dl-------------------~ri~~ll~~~~~~df~Vf~G~D--elLL----~aL~~GA 644 (786)
++ -+-|+=+.++ |+ ..+.++.+ ...-.+.++.|.- ..++ .++.+|+
T Consensus 194 ~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~-a~~~P~v~lsgG~~~~~fl~~v~~A~~aGa 272 (332)
T 3iv3_A 194 MKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEA-STDLPYIYLSAGVSAELFQETLVFAHKAGA 272 (332)
T ss_dssp HHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHH-TCSSCEEEECTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHh-cCCCCEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 42 2556666665 65 23666655 3444566667653 2233 4667899
Q ss_pred --cccccccc
Q psy11975 645 --AGGINALS 652 (786)
Q Consensus 645 --dG~Isg~a 652 (786)
.|+..|=+
T Consensus 273 ~f~Gv~~GRn 282 (332)
T 3iv3_A 273 KFNGVLCGRA 282 (332)
T ss_dssp CCCEEEECHH
T ss_pred CcceEEeeHH
Confidence 99988853
No 61
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=93.19 E-value=0.82 Score=46.64 Aligned_cols=59 Identities=17% Similarity=0.170 Sum_probs=47.1
Q ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC----------------CCCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 520 PQKHTTTRATIDLTQKAAKAGANAALILCPYYF----------------QKKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 520 GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~----------------kps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
-.+..+.++.++.++.+++.|||++-+-.|+-- ..+++.+..++..++|.+.+++||++
T Consensus 25 ~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~ 99 (262)
T 1rd5_A 25 TAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVL 99 (262)
T ss_dssp ETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEE
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 466777899999999999999999999888641 11124677788888888888999987
No 62
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=93.02 E-value=2 Score=44.32 Aligned_cols=61 Identities=18% Similarity=0.282 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCC-----------------CHHHHHHHHHHHHhc-CCCCEEE--Ee
Q psy11975 521 QKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKM-----------------TEDLIYEHFISVADN-SPIPVII--YN 580 (786)
Q Consensus 521 VGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~-----------------S~eeLv~YFraIAeA-tdLPIiL--YN 580 (786)
.|..+.+++++.++..++.|||++.+--|+.- |-+ +-+...+..++|.+. +++||++ |.
T Consensus 25 ~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sd-p~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~ 103 (268)
T 1qop_A 25 LGDPGIEQSLKIIDTLIDAGADALELGVPFSD-PLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYA 103 (268)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCSSEEEECCCSC-CTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECH
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC-ccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcc
Confidence 66777899999999999999999999998742 211 123344667777777 7899966 65
Q ss_pred CC
Q psy11975 581 NT 582 (786)
Q Consensus 581 iP 582 (786)
+|
T Consensus 104 n~ 105 (268)
T 1qop_A 104 NL 105 (268)
T ss_dssp HH
T ss_pred cH
Confidence 55
No 63
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=92.88 E-value=0.74 Score=47.61 Aligned_cols=70 Identities=10% Similarity=0.112 Sum_probs=53.2
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHH-cCCCEEEEc--CCCCCC----CCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAK-AGANAALIL--CPYYFQ----KKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~-aGADAVmVi--PPyY~k----ps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..|+++.+++.+.++..+.++.+++ +|+|+|-+- .|.... ...+.+.+.+..++|.+++++||++--.|.
T Consensus 98 ~~p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~ 174 (311)
T 1ep3_A 98 ELPIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPN 174 (311)
T ss_dssp TSCEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred CCcEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 4689999999999999999999998 999998663 333211 001367778888888888899999876554
No 64
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=92.42 E-value=7.4 Score=41.54 Aligned_cols=72 Identities=11% Similarity=0.093 Sum_probs=52.3
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHc---CCCEEEEcC--CCCC---CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCC
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKA---GANAALILC--PYYF---QKKMTEDLIYEHFISVADNSPIPVIIYNNTFV 584 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~a---GADAVmViP--PyY~---kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~ 584 (786)
+++||++++++.+..+.++.++.++++ +||++-+-- |-.- ......+.+.+..+.+.++++.|+.+---|..
T Consensus 125 ~~~pvivsi~g~~~~~~~~~~~~~~~~~~~~ad~ielNiScPn~~g~~~l~~~~~~~~~i~~~v~~~~~~pv~vK~~p~~ 204 (354)
T 3tjx_A 125 GKKPLFLSMSGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVYPHSFGVKMPPYF 204 (354)
T ss_dssp TTCCEEEEECCSSHHHHHHHHHHHHHHHHHHCCEEEEECC---------CTTSHHHHHHHHHHHHHHCCSCEEEEECCCC
T ss_pred CCceEEEEEecCChHHHHHHHHHHHHhhhcCCCEEEeeeCCCCCcchhhhccCHHHHHHHHHHHHHHhhcccccccCCCC
Confidence 467999999999999888888777654 889876532 2210 01114677888889999999999999887754
No 65
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=92.41 E-value=0.51 Score=50.24 Aligned_cols=140 Identities=8% Similarity=-0.009 Sum_probs=86.8
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC-----CCCCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILC-----PYYFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTN 586 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViP-----PyY~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG 586 (786)
.-++.++-... -|+.++++|+|++.+.. -.+..|+ ++-++++.+.+.|++++++| ++-|.|. |
T Consensus 23 ~i~~~~a~D~~------sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~P-viaD~d~--G 93 (298)
T 3eoo_A 23 PLQVVGAITAY------AAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLP-LLVDIDT--G 93 (298)
T ss_dssp SEEEEECSSHH------HHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSC-EEEECTT--C
T ss_pred cEEEecCCCHH------HHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCe-EEEECCC--C
Confidence 34566776633 24456677999999875 2222332 47999999999999999999 7889885 5
Q ss_pred CccCHHHHHHHH----hCCCEEEEEeC--C-------------------HHHHHHHHhhcCCCCEEEEeCCcchhhh---
Q psy11975 587 IDISVDTLVKLA----HHENIRGVKDT--D-------------------NIKLANMANQTKDLNFSVFAGSAGYLLS--- 638 (786)
Q Consensus 587 v~LSpelL~rLA----eiPNVVGIKDS--D-------------------l~ri~~ll~~~~~~df~Vf~G~DelLL~--- 638 (786)
+. +++.+.+.+ + -.+.|||.+ . ..++...++...+++|.|..=.|.....
T Consensus 94 yg-~~~~v~~~v~~l~~-aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gld 171 (298)
T 3eoo_A 94 WG-GAFNIARTIRSFIK-AGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGID 171 (298)
T ss_dssp SS-SHHHHHHHHHHHHH-TTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHH-hCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHH
Confidence 43 555444433 3 578888887 1 2344444443345677766655554222
Q ss_pred --------hhccCCccccccccccccHHHHHHHHHH
Q psy11975 639 --------GLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 639 --------aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
...+|+|+++.-.. --++.+.++.+++
T Consensus 172 eai~Ra~ay~~AGAD~if~~~~-~~~ee~~~~~~~~ 206 (298)
T 3eoo_A 172 AAIERAIAYVEAGADMIFPEAM-KTLDDYRRFKEAV 206 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEECCC-CSHHHHHHHHHHH
T ss_pred HHHHHHHhhHhcCCCEEEeCCC-CCHHHHHHHHHHc
Confidence 23478888765432 1345666666555
No 66
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=92.06 E-value=0.79 Score=48.57 Aligned_cols=142 Identities=12% Similarity=0.041 Sum_probs=88.4
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC-C---CCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCP-Y---YFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTNI 587 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP-y---Y~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv 587 (786)
.-++.++-... -|+.++++|+|++.+..- . +..|+ ++-++++.+.+.|++++++| ++-|.|. |+
T Consensus 16 ~i~~~~a~D~~------sA~~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~P-viaD~d~--Gy 86 (290)
T 2hjp_A 16 LFTAMAAHNPL------VAKLAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVSIP-LIADIDT--GF 86 (290)
T ss_dssp CEEEEECSSHH------HHHHHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCSSC-EEEECTT--TT
T ss_pred cEEEecCCCHH------HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCC-EEEECCC--CC
Confidence 33556776643 355666789999998841 1 22332 47999999999999999999 6899985 54
Q ss_pred ccCHHHHHHH----HhCCCEEEEEeC--C---------------------HHHHHHHHhhcCCCCEEEEeCCcchh----
Q psy11975 588 DISVDTLVKL----AHHENIRGVKDT--D---------------------NIKLANMANQTKDLNFSVFAGSAGYL---- 636 (786)
Q Consensus 588 ~LSpelL~rL----AeiPNVVGIKDS--D---------------------l~ri~~ll~~~~~~df~Vf~G~DelL---- 636 (786)
. +++.+.+. .+ -.+.|||.+ . ..++..++.....++|.|..=.|..+
T Consensus 87 g-~~~~~~~~v~~l~~-aGa~gv~iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtda~~a~~g 164 (290)
T 2hjp_A 87 G-NAVNVHYVVPQYEA-AGASAIVMEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVEALIAGLG 164 (290)
T ss_dssp S-SHHHHHHHHHHHHH-HTCSEEEEECBCSSCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTTTTTCC
T ss_pred C-CHHHHHHHHHHHHH-hCCeEEEEcCCCCCccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHhhcccc
Confidence 4 55544444 33 578888877 2 22344444432336777665334431
Q ss_pred -h-------hhhccCCccccccccccccHHHHHHHHHHH
Q psy11975 637 -L-------SGLLVGCAGGINALSAVLGGPICELYDLAK 667 (786)
Q Consensus 637 -L-------~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~ 667 (786)
- ....+|+++++.-..---++++.++.+++.
T Consensus 165 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 203 (290)
T 2hjp_A 165 QQEAVRRGQAYEEAGADAILIHSRQKTPDEILAFVKSWP 203 (290)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCSSSHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcC
Confidence 1 123479988876532223577777777764
No 67
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.57 E-value=0.56 Score=50.14 Aligned_cols=136 Identities=10% Similarity=0.017 Sum_probs=85.6
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILC---------PYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVT 585 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViP---------PyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~T 585 (786)
.-++.++-... -|+.++++|+|++++.. |-... ++-++++.+.+.|++++++| ++-|.|.-+
T Consensus 30 ~i~~~~ayD~~------sA~l~e~aG~dai~vs~~s~a~~~G~pD~~~--vt~~em~~~~~~I~r~~~~p-viaD~d~Gy 100 (305)
T 3ih1_A 30 ILQIPGAHDAM------AALVARNTGFLALYLSGAAYTASKGLPDLGI--VTSTEVAERARDLVRATDLP-VLVDIDTGF 100 (305)
T ss_dssp CEEEEBCSSHH------HHHHHHHTTCSCEEECHHHHHHHHTCCSSSC--SCHHHHHHHHHHHHHHHCCC-EEEECTTCS
T ss_pred cEEEecCcCHH------HHHHHHHcCCCEEEECcHHHHHhCCCCCCCc--CCHHHHHHHHHHHHHhcCCC-EEEECCCCC
Confidence 33556666532 46667778999999986 22221 46999999999999999999 788988544
Q ss_pred CCccCHHHHHH----HHhCCCEEEEEeC--C-------------------HHHHHHHHhhcCCCCEEEEeCCcch----h
Q psy11975 586 NIDISVDTLVK----LAHHENIRGVKDT--D-------------------NIKLANMANQTKDLNFSVFAGSAGY----L 636 (786)
Q Consensus 586 Gv~LSpelL~r----LAeiPNVVGIKDS--D-------------------l~ri~~ll~~~~~~df~Vf~G~Del----L 636 (786)
|. ++.+.+ +.+ -.+.|||.+ . ..+++.+++ . +.+|.|..=.|.. +
T Consensus 101 g~---~~~v~~~v~~l~~-aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~-A-~~~~~I~ARtda~~~~g~ 174 (305)
T 3ih1_A 101 GG---VLNVARTAVEMVE-AKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKE-V-APSLYIVARTDARGVEGL 174 (305)
T ss_dssp SS---HHHHHHHHHHHHH-TTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHH-H-CTTSEEEEEECCHHHHCH
T ss_pred CC---HHHHHHHHHHHHH-hCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHH-c-CCCeEEEEeeccccccCH
Confidence 43 443333 333 589999988 2 244555554 2 6788877665643 1
Q ss_pred hh-------hhccCCccccccccccccHHHHHHHHHH
Q psy11975 637 LS-------GLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 637 L~-------aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
-+ ...+|+++++.-.. --++++.++.+++
T Consensus 175 ~~ai~Ra~ay~eAGAD~i~~e~~-~~~~~~~~i~~~~ 210 (305)
T 3ih1_A 175 DEAIERANAYVKAGADAIFPEAL-QSEEEFRLFNSKV 210 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEETTC-CSHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHHHc
Confidence 11 23478888766432 1235555555554
No 68
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=91.51 E-value=2.1 Score=44.99 Aligned_cols=137 Identities=14% Similarity=0.014 Sum_probs=86.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDT 593 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpel 593 (786)
.+||+..=.-.+.. .+..|.++|||+|++..-.. +++++.++++. +...++-+++-= -+.+.
T Consensus 120 ~lPVl~Kdfi~d~~----qi~ea~~~GAD~VlLi~a~L-----~~~~l~~l~~~-a~~lGl~~lvev--------h~~eE 181 (272)
T 3tsm_A 120 SLPALRKDFLFDPY----QVYEARSWGADCILIIMASV-----DDDLAKELEDT-AFALGMDALIEV--------HDEAE 181 (272)
T ss_dssp SSCEEEESCCCSTH----HHHHHHHTTCSEEEEETTTS-----CHHHHHHHHHH-HHHTTCEEEEEE--------CSHHH
T ss_pred CCCEEECCccCCHH----HHHHHHHcCCCEEEEccccc-----CHHHHHHHHHH-HHHcCCeEEEEe--------CCHHH
Confidence 58998854444444 35567789999999997642 36666666555 455677666432 14567
Q ss_pred HHHHHhC-CCEEEEEeC-------CHHHHHHHHhhcCCCCEEEEeCCc----chhhhhhccCCccccccccccccHHHHH
Q psy11975 594 LVKLAHH-ENIRGVKDT-------DNIKLANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSAVLGGPICE 661 (786)
Q Consensus 594 L~rLAei-PNVVGIKDS-------Dl~ri~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN~~Pel~va 661 (786)
+.+..+. +.++|+=.. |+....+++.. .+.++.++.... +.+.....+|++|++-|.+-+-++-..+
T Consensus 182 l~~A~~~ga~iIGinnr~l~t~~~dl~~~~~L~~~-ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~ 260 (272)
T 3tsm_A 182 MERALKLSSRLLGVNNRNLRSFEVNLAVSERLAKM-APSDRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAA 260 (272)
T ss_dssp HHHHTTSCCSEEEEECBCTTTCCBCTHHHHHHHHH-SCTTSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHH
T ss_pred HHHHHhcCCCEEEECCCCCccCCCChHHHHHHHHh-CCCCCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHH
Confidence 7666654 789999743 77888888763 344444444433 2355567799999999987655544444
Q ss_pred HHHHHHcC
Q psy11975 662 LYDLAKAG 669 (786)
Q Consensus 662 L~eA~~aG 669 (786)
..+.+..|
T Consensus 261 ~~~~l~~g 268 (272)
T 3tsm_A 261 ATRALLTG 268 (272)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 44444444
No 69
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=91.27 E-value=0.64 Score=50.69 Aligned_cols=131 Identities=12% Similarity=0.076 Sum_probs=82.9
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCcc
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~L 589 (786)
.++++++.++++.. .+..+.++.+.++|+|+|.+-...- +.+.+.+..+.|.+.+ ++||++-+ ..
T Consensus 138 ~~~~~~~~~~i~~~--~~~~~~a~~~~~~G~d~i~i~~~~g-----~~~~~~e~i~~ir~~~~~~pviv~~-------v~ 203 (404)
T 1eep_A 138 LNNKLRVGAAVSID--IDTIERVEELVKAHVDILVIDSAHG-----HSTRIIELIKKIKTKYPNLDLIAGN-------IV 203 (404)
T ss_dssp TTSCBCCEEEECSC--TTHHHHHHHHHHTTCSEEEECCSCC-----SSHHHHHHHHHHHHHCTTCEEEEEE-------EC
T ss_pred cccCceEEEEeCCC--hhHHHHHHHHHHCCCCEEEEeCCCC-----ChHHHHHHHHHHHHHCCCCeEEEcC-------CC
Confidence 45677788888753 3467788888999999998843321 2466778888888888 79999832 24
Q ss_pred CHHHHHHHHhC-CCEEEE------------Ee--C--CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCcccc
Q psy11975 590 SVDTLVKLAHH-ENIRGV------------KD--T--DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGGI 648 (786)
Q Consensus 590 SpelL~rLAei-PNVVGI------------KD--S--Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~I 648 (786)
+++...++.+. ...+.+ +. . ++..+..+.+.....++.|+. |-. ..+..++++|+++++
T Consensus 204 ~~~~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~ 283 (404)
T 1eep_A 204 TKEAALDLISVGADCLKVGIGPGSICTTRIVAGVGVPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVM 283 (404)
T ss_dssp SHHHHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred cHHHHHHHHhcCCCEEEECCCCCcCcCccccCCCCcchHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHh
Confidence 57777777654 233333 11 1 233333333311223567665 332 347788899999999
Q ss_pred ccccccc
Q psy11975 649 NALSAVL 655 (786)
Q Consensus 649 sg~aN~~ 655 (786)
.+.+.+.
T Consensus 284 iG~~~l~ 290 (404)
T 1eep_A 284 IGNLFAG 290 (404)
T ss_dssp ECHHHHT
T ss_pred hCHHHhc
Confidence 9876543
No 70
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=91.27 E-value=0.89 Score=48.27 Aligned_cols=144 Identities=10% Similarity=0.082 Sum_probs=86.3
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC----CCCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCP----YYFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTN 586 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP----yY~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG 586 (786)
+.-++.++-... .|+.++++|+|++.+..- .+..|+ ++-++++.+.+.|++++++| ++-|.|.-.|
T Consensus 19 ~~i~~~~a~D~~------sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~P-viaD~d~Gyg 91 (295)
T 1s2w_A 19 DLEFIMEAHNGL------SARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVP-ILLDADTGYG 91 (295)
T ss_dssp SCEEEEEECSHH------HHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSC-EEEECCSSCS
T ss_pred CcEEEecCCCHH------HHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCC-EEecCCCCCC
Confidence 334566777643 345566679999998841 122232 46789999999999999999 8899985444
Q ss_pred CccCHHHHHHHH-h--CCCEEEEEeC--C---------------------HHHHHHHHhhcCCCCEEEEeCCcchhh---
Q psy11975 587 IDISVDTLVKLA-H--HENIRGVKDT--D---------------------NIKLANMANQTKDLNFSVFAGSAGYLL--- 637 (786)
Q Consensus 587 v~LSpelL~rLA-e--iPNVVGIKDS--D---------------------l~ri~~ll~~~~~~df~Vf~G~DelLL--- 637 (786)
+++.+.+.+ + --.+.|||.+ . ..++..++++...++|.|..=.|..+.
T Consensus 92 ---~~~~v~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g 168 (295)
T 1s2w_A 92 ---NFNNARRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWG 168 (295)
T ss_dssp ---SHHHHHHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCC
T ss_pred ---CHHHHHHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhcccc
Confidence 334333333 1 2578898877 2 233444444333567776653343311
Q ss_pred ---------hhhccCCccccccccccccHHHHHHHHHHH
Q psy11975 638 ---------SGLLVGCAGGINALSAVLGGPICELYDLAK 667 (786)
Q Consensus 638 ---------~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~ 667 (786)
....+|+++++.-..---++++.++.+++.
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~ 207 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKADPSDIEAFMKAWN 207 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSSSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcC
Confidence 223479988876421112577888888775
No 71
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=90.89 E-value=0.12 Score=45.66 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=44.5
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
...|.+||.|.||-..--|.||+|...... +.|.|.|++ +. ...|....|+|+.+.
T Consensus 19 ~~~f~vGd~VlArW~D~~yYPAkI~sV~~~-~~YtV~F~D-G~--~etvk~~~IKp~~~~ 74 (85)
T 3qii_A 19 SSEFQINEQVLACWSDCRFYPAKVTAVNKD-GTYTVKFYD-GV--VQTVKHIHVKAFSKD 74 (85)
T ss_dssp --CCCTTCEEEEECTTSCEEEEEEEEECTT-SEEEEEETT-SC--EEEEEGGGEEECC--
T ss_pred CcccccCCEEEEEeCCCCEeeEEEEEECCC-CeEEEEEeC-CC--eEEecHHHcccCChh
Confidence 457999999999998899999999987653 689999999 53 345788999999773
No 72
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=90.78 E-value=0.94 Score=48.05 Aligned_cols=140 Identities=9% Similarity=0.097 Sum_probs=82.0
Q ss_pred cCCCCeEEEeCCCCCH------HH-HH---HHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhc---CCCCEE
Q psy11975 511 REWQADLLKPQKHTTT------RA-TI---DLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADN---SPIPVI 577 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST------~E-AI---ELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeA---tdLPIi 577 (786)
.+.++++|++..+.+. .+ .+ .-+++|.++|||+|-++- |+.+..++++.++..+++.++ .++|++
T Consensus 82 ~~~~~glil~l~~~~~l~~~~~~~~l~~~~~~ve~a~~~GAdaV~vlv--~~~~d~~~~~~~~~i~~v~~~~~~~G~p~l 159 (304)
T 1to3_A 82 VAKSCAMIVAADDFIPGNGIPVDNVVLDKKINAQAVKRDGAKALKLLV--LWRSDEDAQQRLNMVKEFNELCHSNGLLSI 159 (304)
T ss_dssp SCTTSEEEEECEEEEEETTEEEEEEEECSSCCHHHHHHTTCCEEEEEE--EECTTSCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred cCCCCcEEEEECCCCCCCCCccchhhccCchhHHHHHHcCCCEEEEEE--EcCCCccHHHHHHHHHHHHHHHHHcCCcEE
Confidence 3456788877644111 11 23 557788889999998774 444432366666777666665 489988
Q ss_pred EEeCCCC--cCCccCH-HHHHHHH----hC-CCEEEEEeC-----CHHHHHHHHhh---cCCCCEEEEeCCc-c-----h
Q psy11975 578 IYNNTFV--TNIDISV-DTLVKLA----HH-ENIRGVKDT-----DNIKLANMANQ---TKDLNFSVFAGSA-G-----Y 635 (786)
Q Consensus 578 LYNiP~~--TGv~LSp-elL~rLA----ei-PNVVGIKDS-----Dl~ri~~ll~~---~~~~df~Vf~G~D-e-----l 635 (786)
+-=+|.. .+.+.++ +.+.+.+ ++ -.+++++.. +.+.+.++++. ..+-.+.++.|.. . .
T Consensus 160 v~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~ 239 (304)
T 1to3_A 160 IEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRA 239 (304)
T ss_dssp EEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHH
T ss_pred EEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHH
Confidence 7655432 2222344 5554432 33 357777773 45666666552 1344534445543 2 2
Q ss_pred hhhhhccCCcccccccc
Q psy11975 636 LLSGLLVGCAGGINALS 652 (786)
Q Consensus 636 LL~aL~~GAdG~Isg~a 652 (786)
+..++..|++|++.|-+
T Consensus 240 ~~~a~~aGa~Gv~vGRa 256 (304)
T 1to3_A 240 VRVAMEAGASGFLAGRA 256 (304)
T ss_dssp HHHHHHTTCCEEEESHH
T ss_pred HHHHHHcCCeEEEEehH
Confidence 44567789999998854
No 73
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=90.29 E-value=0.86 Score=49.70 Aligned_cols=145 Identities=12% Similarity=0.082 Sum_probs=89.6
Q ss_pred CCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Q psy11975 466 SMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDLTQKAAKAGANAAL 545 (786)
Q Consensus 466 sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVm 545 (786)
.++.++..+.++. +.+. +++.|-++++.. .+..+.++.+.++|+|.|.
T Consensus 78 ~~s~e~~~~~i~~---vk~~---------------------------~~l~vga~vg~~--~~~~~~~~~lieaGvd~I~ 125 (366)
T 4fo4_A 78 NMSIEQQAAQVHQ---VKIS---------------------------GGLRVGAAVGAA--PGNEERVKALVEAGVDVLL 125 (366)
T ss_dssp SSCHHHHHHHHHH---HHTT---------------------------TSCCCEEECCSC--TTCHHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHH---HHhc---------------------------CceeEEEEeccC--hhHHHHHHHHHhCCCCEEE
Confidence 5899998888876 2210 244555555432 3567788899999999988
Q ss_pred EcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC---------------
Q psy11975 546 ILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT--------------- 609 (786)
Q Consensus 546 ViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS--------------- 609 (786)
+-...- . .+.+++..+.+.++. ++||+.-| -.+++...++.+. .+-+||-.
T Consensus 126 idta~G--~---~~~~~~~I~~ik~~~p~v~Vi~G~-------v~t~e~A~~a~~a-GAD~I~vG~gpGs~~~tr~~~g~ 192 (366)
T 4fo4_A 126 IDSSHG--H---SEGVLQRIRETRAAYPHLEIIGGN-------VATAEGARALIEA-GVSAVKVGIGPGSICTTRIVTGV 192 (366)
T ss_dssp EECSCT--T---SHHHHHHHHHHHHHCTTCEEEEEE-------ECSHHHHHHHHHH-TCSEEEECSSCSTTBCHHHHHCC
T ss_pred EeCCCC--C---CHHHHHHHHHHHHhcCCCceEeee-------eCCHHHHHHHHHc-CCCEEEEecCCCCCCCcccccCc
Confidence 743321 1 356778888888887 78988854 3567777777643 22233321
Q ss_pred ---CHHHHHHHHhhcCCCCEEEEe--CC-c-chhhhhhccCCccccccccccc
Q psy11975 610 ---DNIKLANMANQTKDLNFSVFA--GS-A-GYLLSGLLVGCAGGINALSAVL 655 (786)
Q Consensus 610 ---Dl~ri~~ll~~~~~~df~Vf~--G~-D-elLL~aL~~GAdG~Isg~aN~~ 655 (786)
++..+.++.+.....++.|+. |- + ..+..+|.+|++|++.|..-+.
T Consensus 193 g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~vGs~f~~ 245 (366)
T 4fo4_A 193 GVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVGSMFAG 245 (366)
T ss_dssp CCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEESTTTTT
T ss_pred ccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhc
Confidence 223333333211122455555 44 2 3477889999999998876543
No 74
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=90.26 E-value=1.7 Score=45.83 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=85.6
Q ss_pred CCeEEEeCCCCC-------HHHHHHHHHHHHHcCCCEEEEc--CCCCC--CCCCCHHHHHHHHHHHHhcC---------C
Q psy11975 514 QADLLKPQKHTT-------TRATIDLTQKAAKAGANAALIL--CPYYF--QKKMTEDLIYEHFISVADNS---------P 573 (786)
Q Consensus 514 RVPVIaGVGa~S-------T~EAIELAr~Ae~aGADAVmVi--PPyY~--kps~S~eeLv~YFraIAeAt---------d 573 (786)
+.|+++.++... .++..+.++.+.+ |+|++.+- .|... ....+.+.+.+..+.|-+++ +
T Consensus 133 ~~~~~v~i~~~~~~~i~~~~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~ 211 (336)
T 1f76_A 133 DGVLGINIGKNKDTPVEQGKDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKY 211 (336)
T ss_dssp CSEEEEEECCCTTSCGGGTHHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CCcEEEEecCCCCCcccccHHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhccccc
Confidence 358999998876 7888888888876 99998664 34321 00013555667777777766 7
Q ss_pred CCEEEEeCCCCcCCccCHHHHHHHH---hCCCEEEEEeC-----------------------------CHHHHHHHHhhc
Q psy11975 574 IPVIIYNNTFVTNIDISVDTLVKLA---HHENIRGVKDT-----------------------------DNIKLANMANQT 621 (786)
Q Consensus 574 LPIiLYNiP~~TGv~LSpelL~rLA---eiPNVVGIKDS-----------------------------Dl~ri~~ll~~~ 621 (786)
+||++=-.| +++.+.+.+++ .--.+-||.-+ .+..+.++.+ .
T Consensus 212 ~Pv~vKi~~-----~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~-~ 285 (336)
T 1f76_A 212 VPIAVKIAP-----DLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSL-E 285 (336)
T ss_dssp CCEEEECCS-----CCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHH-H
T ss_pred CceEEEecC-----CCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHH-H
Confidence 999986333 35554443333 21234444422 0122333333 2
Q ss_pred CCCCEEEEe-CC-c--chhhhhhccCCccccccccccc--cHHHHHHHH
Q psy11975 622 KDLNFSVFA-GS-A--GYLLSGLLVGCAGGINALSAVL--GGPICELYD 664 (786)
Q Consensus 622 ~~~df~Vf~-G~-D--elLL~aL~~GAdG~Isg~aN~~--Pel~vaL~e 664 (786)
.++++.|+. |. . +.....+..||+++..+.+.++ |+++.++.+
T Consensus 286 ~~~~ipVi~~GGI~~~~da~~~l~~GAd~V~igr~~l~~~P~~~~~i~~ 334 (336)
T 1f76_A 286 LNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT 334 (336)
T ss_dssp HTTSSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCHHHHHHHHH
T ss_pred hCCCCCEEEECCCCCHHHHHHHHHCCCCEEEeeHHHHhcCcHHHHHHHh
Confidence 333455443 32 2 2366778899999999888765 877776654
No 75
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=89.53 E-value=0.74 Score=51.80 Aligned_cols=131 Identities=15% Similarity=0.057 Sum_probs=84.8
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCcc
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~L 589 (786)
..||+.|-+++|.. .+..+.++.+.++|+|.|.+-.-.- ..+.+.+..+.|.+.. ++||++-| -.
T Consensus 214 ~~grl~v~aavG~~--~~~~~~a~~l~~aG~d~I~id~a~g-----~~~~~~~~v~~i~~~~p~~~Vi~g~-------v~ 279 (490)
T 4avf_A 214 EQGRLRVGAAVGTG--ADTGERVAALVAAGVDVVVVDTAHG-----HSKGVIERVRWVKQTFPDVQVIGGN-------IA 279 (490)
T ss_dssp TTSCBCCEEEECSS--TTHHHHHHHHHHTTCSEEEEECSCC-----SBHHHHHHHHHHHHHCTTSEEEEEE-------EC
T ss_pred ccCcceeeeeeccc--cchHHHHHHHhhcccceEEecccCC-----cchhHHHHHHHHHHHCCCceEEEee-------eC
Confidence 45677776666664 5667888888999999998864331 1356778888888888 78999955 35
Q ss_pred CHHHHHHHHhCCCEEEEEe-----------------C-CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCccc
Q psy11975 590 SVDTLVKLAHHENIRGVKD-----------------T-DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGG 647 (786)
Q Consensus 590 SpelL~rLAeiPNVVGIKD-----------------S-Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~ 647 (786)
+.+...+|.+. .+-+||- . ++..+.++.+.....++.|+. |-. +.+..++.+||+|+
T Consensus 280 t~e~a~~l~~a-GaD~I~vg~g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V 358 (490)
T 4avf_A 280 TAEAAKALAEA-GADAVKVGIGPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCV 358 (490)
T ss_dssp SHHHHHHHHHT-TCSEEEECSSCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEE
T ss_pred cHHHHHHHHHc-CCCEEEECCCCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCee
Confidence 67777777653 2333332 0 233344444422223455555 332 34677889999999
Q ss_pred ccccccccc
Q psy11975 648 INALSAVLG 656 (786)
Q Consensus 648 Isg~aN~~P 656 (786)
+.|.+.+..
T Consensus 359 ~vGs~~~~~ 367 (490)
T 4avf_A 359 MMGSMFAGT 367 (490)
T ss_dssp EECTTTTTB
T ss_pred eecHHHhcC
Confidence 999875543
No 76
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=89.14 E-value=3.5 Score=40.33 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=44.0
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
+.||++.+.+.+.++.++.++.+.+.|++++.+..+- +. . .+..+++++..++++++
T Consensus 6 ~~~i~~~i~~~d~~~~~~~~~~~~~~G~~~i~l~~~~---~~--~---~~~i~~i~~~~~~~l~v 62 (212)
T 2v82_A 6 KLPLIAILRGITPDEALAHVGAVIDAGFDAVEIPLNS---PQ--W---EQSIPAIVDAYGDKALI 62 (212)
T ss_dssp SSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEETTS---TT--H---HHHHHHHHHHHTTTSEE
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEeCCC---hh--H---HHHHHHHHHhCCCCeEE
Confidence 5689999999999999999999999999999886542 22 2 34555666666677776
No 77
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=89.08 E-value=0.22 Score=42.23 Aligned_cols=55 Identities=16% Similarity=0.250 Sum_probs=44.5
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
..|.+||.|.|+=..--|-||+|..-... +.|.|.|++ +. ...|....|+++.+.
T Consensus 5 ~~~~vGd~vmArW~D~~yYpA~I~si~~~-~~Y~V~F~d-G~--~etvk~~~ikp~~~~ 59 (67)
T 3p8d_A 5 SEFQINEQVLACWSDCRFYPAKVTAVNKD-GTYTVKFYD-GV--VQTVKHIHVKAFSKD 59 (67)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEECTT-SEEEEEETT-SC--EEEEEGGGEEECC--
T ss_pred cccccCCEEEEEcCCCCEeeEEEEEECCC-CeEEEEEeC-Cc--eEEEeHHHcccCCcc
Confidence 37999999999998888999999987654 679999999 53 345788999998774
No 78
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=89.08 E-value=0.66 Score=52.33 Aligned_cols=131 Identities=12% Similarity=0.092 Sum_probs=84.6
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCcc
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~L 589 (786)
..||+.|.++++.. .+.++.++.+.++|+|.|.+-.-. +. .+.+.+..++|.++. ++||++-|. .
T Consensus 216 ~~grL~v~aavG~~--~d~~~~a~~l~~aG~d~I~id~a~---g~--~~~~~~~i~~ir~~~p~~~Vi~g~v-------~ 281 (496)
T 4fxs_A 216 EQGRLRVGAAVGAA--PGNEERVKALVEAGVDVLLIDSSH---GH--SEGVLQRIRETRAAYPHLEIIGGNV-------A 281 (496)
T ss_dssp TTSCBCCEEECCSS--SCCHHHHHHHHHTTCSEEEEECSC---TT--SHHHHHHHHHHHHHCTTCCEEEEEE-------C
T ss_pred cccceeeeeeeccc--cchHHHHHHHHhccCceEEecccc---cc--chHHHHHHHHHHHHCCCceEEEccc-------C
Confidence 46778888877764 566788888889999999887543 22 466788889998888 799999553 5
Q ss_pred CHHHHHHHHhCCCEEEEEe-----------------C-CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCccc
Q psy11975 590 SVDTLVKLAHHENIRGVKD-----------------T-DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGG 647 (786)
Q Consensus 590 SpelL~rLAeiPNVVGIKD-----------------S-Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~ 647 (786)
+.+...+|.+. .+-+||- . ++..+.++.+.....++.|+. |-. +.+..++++||+|+
T Consensus 282 t~e~a~~l~~a-GaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V 360 (496)
T 4fxs_A 282 TAEGARALIEA-GVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCV 360 (496)
T ss_dssp SHHHHHHHHHH-TCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred cHHHHHHHHHh-CCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeE
Confidence 56777777642 2223332 1 233344444321122355555 322 34677889999999
Q ss_pred ccccccccc
Q psy11975 648 INALSAVLG 656 (786)
Q Consensus 648 Isg~aN~~P 656 (786)
+.|..-...
T Consensus 361 ~iGs~f~~t 369 (496)
T 4fxs_A 361 MVGSMFAGT 369 (496)
T ss_dssp EESTTTTTB
T ss_pred EecHHHhcC
Confidence 998765443
No 79
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=88.95 E-value=1.3 Score=46.92 Aligned_cols=139 Identities=9% Similarity=0.001 Sum_probs=86.5
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC-C----CCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCC
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCP-Y----YFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTNI 587 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP-y----Y~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv 587 (786)
-++.++-.. --|+.++++|+|++.+..- . +..|+ ++-++++.+.+.|++++++| ++-|.|. |+
T Consensus 23 i~~~~a~D~------~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~P-viaD~d~--Gy 93 (287)
T 3b8i_A 23 YHTASVFDP------MSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLP-VIADADH--GY 93 (287)
T ss_dssp EECEECCSH------HHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSC-EEEECTT--CS
T ss_pred EEEecCCCH------HHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCC-EEEECCC--CC
Confidence 355576663 2356677789999988754 1 12232 47999999999999999999 6899985 44
Q ss_pred ccCHHHHHHH----HhCCCEEEEEeC--C------------------HHHHHHHHhhcCCCCEEEEeCCcc-------hh
Q psy11975 588 DISVDTLVKL----AHHENIRGVKDT--D------------------NIKLANMANQTKDLNFSVFAGSAG-------YL 636 (786)
Q Consensus 588 ~LSpelL~rL----AeiPNVVGIKDS--D------------------l~ri~~ll~~~~~~df~Vf~G~De-------lL 636 (786)
. +++.+.+. .+ -.+.|||.+ . ..+++.++++...++|.|..=.|. .+
T Consensus 94 g-~~~~~~~~v~~l~~-aGa~gv~iED~~~pKrcgh~~gkl~~~~e~~~~I~aa~~a~~~~~~~i~aRtdaa~~gl~~ai 171 (287)
T 3b8i_A 94 G-NALNVMRTVVELER-AGIAALTIEDTLLPAQFGRKSTDLICVEEGVGKIRAALEARVDPALTIIARTNAELIDVDAVI 171 (287)
T ss_dssp S-SHHHHHHHHHHHHH-HTCSEEEEECBCCSCCTTTCTTCBCCHHHHHHHHHHHHHHCCSTTSEEEEEEETTTSCHHHHH
T ss_pred C-CHHHHHHHHHHHHH-hCCeEEEEcCCCCccccCCCCCCccCHHHHHHHHHHHHHcCCCCCcEEEEechhhhcCHHHHH
Confidence 4 65544444 34 689999988 3 245555555333567776543333 11
Q ss_pred h---hhhccCCccccccccccccHHHHHHHHHH
Q psy11975 637 L---SGLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 637 L---~aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
- ....+|+++++.-.- --++++.++.+++
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~-~~~~~~~~i~~~~ 203 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVGV-RDFAHLEAIAEHL 203 (287)
T ss_dssp HHHHHHHHTTCSEEEEECC-CSHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEecCC-CCHHHHHHHHHhC
Confidence 1 123478887765421 1135666665554
No 80
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=88.93 E-value=2 Score=46.69 Aligned_cols=146 Identities=7% Similarity=-0.029 Sum_probs=85.6
Q ss_pred CCeEEEeCCCC-----CHHHHHHHHHHHHHcCCCEEEEc--CCCCCC--CCCCHHHHHHHHHHHHhc-------CCCCEE
Q psy11975 514 QADLLKPQKHT-----TTRATIDLTQKAAKAGANAALIL--CPYYFQ--KKMTEDLIYEHFISVADN-------SPIPVI 577 (786)
Q Consensus 514 RVPVIaGVGa~-----ST~EAIELAr~Ae~aGADAVmVi--PPyY~k--ps~S~eeLv~YFraIAeA-------tdLPIi 577 (786)
+.||++.++.+ +.+|-++.++.+.+ ++|++-+= .|..-. .-.+.+.+.+..++|.++ +++||+
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~-~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~ 224 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGP-LADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVL 224 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEE
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhh-hCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEE
Confidence 46899999885 56666666666664 58998763 343211 001467777888877654 689999
Q ss_pred EEeCCCCcCCccCHHHHHHHH---h---CCCEEEE---------------------EeC-----CHHHHHHHHhhcCCCC
Q psy11975 578 IYNNTFVTNIDISVDTLVKLA---H---HENIRGV---------------------KDT-----DNIKLANMANQTKDLN 625 (786)
Q Consensus 578 LYNiP~~TGv~LSpelL~rLA---e---iPNVVGI---------------------KDS-----Dl~ri~~ll~~~~~~d 625 (786)
+=-.|. ++.+.+.+++ + ...|+-. .-. .+..+.++.+ ..+++
T Consensus 225 vKi~p~-----~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~-~v~~~ 298 (367)
T 3zwt_A 225 VKIAPD-----LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYA-LTQGR 298 (367)
T ss_dssp EEECSC-----CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHH-HTTTC
T ss_pred EEeCCC-----CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHH-HcCCC
Confidence 987664 4444444443 2 3334321 000 1233444444 34445
Q ss_pred EEEEe-CC-c--chhhhhhccCCccccccccccc--cHHHHHHHHHH
Q psy11975 626 FSVFA-GS-A--GYLLSGLLVGCAGGINALSAVL--GGPICELYDLA 666 (786)
Q Consensus 626 f~Vf~-G~-D--elLL~aL~~GAdG~Isg~aN~~--Pel~vaL~eA~ 666 (786)
+.|+. |. . +.....+..||++++.+.+.++ |.++.++.+.+
T Consensus 299 ipvI~~GGI~s~~da~~~l~~GAd~V~vgra~l~~gP~~~~~i~~~l 345 (367)
T 3zwt_A 299 VPIIGVGGVSSGQDALEKIRAGASLVQLYTALTFWGPPVVGKVKREL 345 (367)
T ss_dssp SCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHHHCTHHHHHHHHHH
T ss_pred ceEEEECCCCCHHHHHHHHHcCCCEEEECHHHHhcCcHHHHHHHHHH
Confidence 55443 32 2 2366778899999999998754 76665555443
No 81
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=88.90 E-value=4.3 Score=42.21 Aligned_cols=61 Identities=8% Similarity=0.101 Sum_probs=45.7
Q ss_pred CeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCH-------HHHHHHHHHHHhcCCCCEEE
Q psy11975 515 ADLLKPQKH-TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTE-------DLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 515 VPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~-------eeLv~YFraIAeAtdLPIiL 578 (786)
+-||+|..+ .+.+.+.++++.++++|||+|.... |+|..+. ++-.+.++++++..++|++-
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~~---fkprts~~~~~g~~~egl~~l~~~~~~~Gl~~~t 92 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGGA---FKPRTSPYSFQGYGEKALRWMREAADEYGLVTVT 92 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBS---SCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEEe---cccCCCcccccCccHHHHHHHHHHHHHcCCcEEE
Confidence 567888865 4789999999999999999998874 2322122 44457777888888999874
No 82
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=88.71 E-value=4.3 Score=42.68 Aligned_cols=64 Identities=16% Similarity=0.132 Sum_probs=46.5
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEcC------CCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 513 WQADLLKPQKHT-TTRATIDLTQKAAKAGANAALILC------PYYFQKKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 513 GRVPVIaGVGa~-ST~EAIELAr~Ae~aGADAVmViP------PyY~kps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
+++-||+|.++. +.+.++++|+.++++|+|++-... |+-|+. +. ++-.+.++++++..++|++-
T Consensus 37 ~~~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g-~g-~~gl~~l~~~~~~~Gl~~~t 107 (276)
T 1vs1_A 37 GSKAVIAGPCSVESWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQG-LG-LEGLKLLRRAGDEAGLPVVT 107 (276)
T ss_dssp TBCEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCC-CT-HHHHHHHHHHHHHHTCCEEE
T ss_pred CCeEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcC-CC-HHHHHHHHHHHHHcCCcEEE
Confidence 367799998875 888999999999999999865431 221221 11 44567778888889999984
No 83
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=88.48 E-value=2.3 Score=45.07 Aligned_cols=142 Identities=11% Similarity=0.049 Sum_probs=85.5
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC-----CCCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCP-----YYFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTN 586 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP-----yY~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG 586 (786)
.-++.++-... -|+.++++|+|++.+..- .+..|+ ++-++++.+.+.|++++++| ++-|+|. |
T Consensus 18 ~i~~~~a~D~~------sA~~~~~aG~~ai~vs~~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~P-viaD~d~--G 88 (295)
T 1xg4_A 18 PLQIVGTINAN------HALLAQRAGYQAIYLSGGGVAAGSLGLPDLGISTLDDVLTDIRRITDVCSLP-LLVDADI--G 88 (295)
T ss_dssp SEEEEECSSHH------HHHHHHHTTCSCEEECHHHHHHTTTCCCSSSCSCHHHHHHHHHHHHHHCCSC-EEEECTT--C
T ss_pred cEEEecCcCHH------HHHHHHHcCCCEEEECchHhhhhhcCCCCCCCCCHHHHHHHHHHHHhhCCCC-EEecCCc--c
Confidence 33556766632 366777889999988753 122232 47999999999999999999 6789884 5
Q ss_pred CccCHHHHHHHHh---CCCEEEEEeC--C-------------------HHHHHHHHhhcCCCCEEEEeCCcchh----h-
Q psy11975 587 IDISVDTLVKLAH---HENIRGVKDT--D-------------------NIKLANMANQTKDLNFSVFAGSAGYL----L- 637 (786)
Q Consensus 587 v~LSpelL~rLAe---iPNVVGIKDS--D-------------------l~ri~~ll~~~~~~df~Vf~G~DelL----L- 637 (786)
+.-+++.+.+.++ --.+.|||.+ . ..++...+++...++|.|..=.|... -
T Consensus 89 yg~~~~~~~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ 168 (295)
T 1xg4_A 89 FGSSAFNVARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDA 168 (295)
T ss_dssp SSSSHHHHHHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHH
T ss_pred cCCCHHHHHHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHH
Confidence 4445554444431 1478888877 2 12444444433356777654434332 1
Q ss_pred ------hhhccCCccccccccccccHHHHHHHHHH
Q psy11975 638 ------SGLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 638 ------~aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
....+|+++++.-.- --++++.++.+++
T Consensus 169 ai~ra~ay~eAGAd~i~~e~~-~~~~~~~~i~~~~ 202 (295)
T 1xg4_A 169 AIERAQAYVEAGAEMLFPEAI-TELAMYRQFADAV 202 (295)
T ss_dssp HHHHHHHHHHTTCSEEEETTC-CSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCC-CCHHHHHHHHHHc
Confidence 123478887765431 1124555555544
No 84
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=88.11 E-value=2.7 Score=44.21 Aligned_cols=108 Identities=12% Similarity=0.054 Sum_probs=69.4
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC----CCCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCcc
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCP----YYFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP----yY~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~L 589 (786)
++.++-... -|+.++++|+|++.+..- .+..|+ ++-++++.+.+.|++++++| ++-|.|. |+.-
T Consensus 19 ~~~~a~D~~------sA~~~~~aG~~ai~vsg~s~a~~~G~pD~~~vt~~em~~~~~~I~~~~~~p-viaD~d~--Gyg~ 89 (275)
T 2ze3_A 19 LLPNAWDVA------SARLLEAAGFTAIGTTSAGIAHARGRTDGQTLTRDEMGREVEAIVRAVAIP-VNADIEA--GYGH 89 (275)
T ss_dssp EECEESSHH------HHHHHHHHTCSCEEECHHHHHHHSCCCSSSSSCHHHHHHHHHHHHHHCSSC-EEEECTT--CSSS
T ss_pred eEecccCHH------HHHHHHHcCCCEEEECcHHHHHhCCCCCCCCCCHHHHHHHHHHHHhhcCCC-EEeecCC--CCCC
Confidence 445655532 355566779999998831 122232 47999999999999999998 7788884 5544
Q ss_pred CHHH----HHHHHhCCCEEEEEeC--C-------------HHHHHHHHhhcC--CCCEEEEeCCcc
Q psy11975 590 SVDT----LVKLAHHENIRGVKDT--D-------------NIKLANMANQTK--DLNFSVFAGSAG 634 (786)
Q Consensus 590 Spel----L~rLAeiPNVVGIKDS--D-------------l~ri~~ll~~~~--~~df~Vf~G~De 634 (786)
+++. +.+|.+ -.+.|||.+ . ..+++.+++... +.+|.|..=.|.
T Consensus 90 ~~~~~~~~v~~l~~-aGaagv~iED~~~~~~k~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtda 154 (275)
T 2ze3_A 90 APEDVRRTVEHFAA-LGVAGVNLEDATGLTPTELYDLDSQLRRIEAARAAIDASGVPVFLNARTDT 154 (275)
T ss_dssp SHHHHHHHHHHHHH-TTCSEEEEECBCSSSSSCBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECCT
T ss_pred CHHHHHHHHHHHHH-cCCcEEEECCCcCCCCCccCCHHHHHHHHHHHHHhHhhcCCCeEEEEechh
Confidence 5544 444445 689999988 3 244555544211 566766554444
No 85
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=88.07 E-value=4.5 Score=42.50 Aligned_cols=144 Identities=10% Similarity=0.007 Sum_probs=93.7
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHH-c-CCCEEEE---cCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCC
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAK-A-GANAALI---LCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNI 587 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~-a-GADAVmV---iPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv 587 (786)
++.++. -.|+.+.+||+..||.|.+ + |-+.|=+ .-+.|..|+ ..+.++-.+.+. ..++-++.|-.+.
T Consensus 73 ~~~~lpNTag~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD--~~~tv~aa~~L~-~~Gf~Vlpy~~dd---- 145 (265)
T 1wv2_A 73 RYTILPNTAGCYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPN--VVETLKAAEQLV-KDGFDVMVYTSDD---- 145 (265)
T ss_dssp TSEEEEECTTCCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBC--HHHHHHHHHHHH-TTTCEEEEEECSC----
T ss_pred CCEECCcCCCCCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcC--HHHHHHHHHHHH-HCCCEEEEEeCCC----
Confidence 567776 4567889999999999999 5 6665532 335555555 888888888775 3578888786653
Q ss_pred ccCHHHHHHHHhC-CCEEEE-------EeC--CHHHHHHHHhhcCCCCEEEEeCCc----chhhhhhccCCccccccccc
Q psy11975 588 DISVDTLVKLAHH-ENIRGV-------KDT--DNIKLANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 588 ~LSpelL~rLAei-PNVVGI-------KDS--Dl~ri~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN 653 (786)
+.+-++|++. +.++-- --. |++.+..+++. .++.|+++.. +....++.+|++|++.+++-
T Consensus 146 ---~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~~~lI~~I~e~---~~vPVI~eGGI~TPsDAa~AmeLGAdgVlVgSAI 219 (265)
T 1wv2_A 146 ---PIIARQLAEIGCIAVMPLAGLIGSGLGICNPYNLRIILEE---AKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAI 219 (265)
T ss_dssp ---HHHHHHHHHSCCSEEEECSSSTTCCCCCSCHHHHHHHHHH---CSSCBEEESCCCSHHHHHHHHHHTCSEEEESHHH
T ss_pred ---HHHHHHHHHhCCCEEEeCCccCCCCCCcCCHHHHHHHHhc---CCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 6777888764 344422 011 66777666652 3455554321 34677899999999999875
Q ss_pred cc---cH-HHHHHHHHHHcCC
Q psy11975 654 VL---GG-PICELYDLAKAGK 670 (786)
Q Consensus 654 ~~---Pe-l~vaL~eA~~aGD 670 (786)
.- |. ...++.+++++|.
T Consensus 220 ~~a~dP~~ma~af~~Av~aGr 240 (265)
T 1wv2_A 220 AHAKDPVMMAEAMKHAIVAGR 240 (265)
T ss_dssp HTSSSHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHH
Confidence 54 43 2344455555554
No 86
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=87.66 E-value=2.1 Score=45.76 Aligned_cols=72 Identities=18% Similarity=0.171 Sum_probs=48.3
Q ss_pred CCeEEEeCCC---CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC--Cc
Q psy11975 514 QADLLKPQKH---TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN--ID 588 (786)
Q Consensus 514 RVPVIaGVGa---~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG--v~ 588 (786)
.+.|++-+-+ ...+++|+.++.++++|||+|++-.+ ++ . +.+++|+++.++|++ -|.=. .| ..
T Consensus 159 ~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~e~~----~~--~----~~~~~i~~~~~~P~~-~n~~~-~g~tp~ 226 (305)
T 3ih1_A 159 SLYIVARTDARGVEGLDEAIERANAYVKAGADAIFPEAL----QS--E----EEFRLFNSKVNAPLL-ANMTE-FGKTPY 226 (305)
T ss_dssp TSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEETTC----CS--H----HHHHHHHHHSCSCBE-EECCT-TSSSCC
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEEcCC----CC--H----HHHHHHHHHcCCCEE-EeecC-CCCCCC
Confidence 4556665543 34899999999999999999999754 23 3 445667777789995 35311 12 23
Q ss_pred cCHHHHHHH
Q psy11975 589 ISVDTLVKL 597 (786)
Q Consensus 589 LSpelL~rL 597 (786)
++.+.|.+|
T Consensus 227 ~~~~eL~~l 235 (305)
T 3ih1_A 227 YSAEEFANM 235 (305)
T ss_dssp CCHHHHHHT
T ss_pred CCHHHHHHc
Confidence 666666665
No 87
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=87.46 E-value=0.33 Score=40.14 Aligned_cols=58 Identities=16% Similarity=0.218 Sum_probs=46.8
Q ss_pred cCCCCCCCceEEEecc--cCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVK--GYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvk--G~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
....+.+||++-|+-. | -|-+|+|.......+.+.|.|-+.++ ...|..++|+|+.||
T Consensus 5 ~~~~~~vGd~c~A~~s~Dg-~wYrA~I~~v~~~~~~~~V~fvdYGn--~e~V~~~~Lrpl~~~ 64 (64)
T 4a4f_A 5 PTHSWKVGDKCMAVWSEDG-QCYEAEIEEIDEENGTAAITFAGYGN--AEVTPLLNLKPVEEG 64 (64)
T ss_dssp CSSCCCTTCEEEEECTTTS-SEEEEEEEEEETTTTEEEEEETTTTE--EEEEEGGGEECCSCC
T ss_pred cCCCCCCCCEEEEEECCCC-CEEEEEEEEEcCCCCEEEEEEEecCC--EEEEeHHHcEeCCCC
Confidence 3457999999999973 5 49999999876555789999998875 455788999998775
No 88
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=87.11 E-value=1.5 Score=46.31 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=68.5
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC----CCCC---CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPY----YFQK---KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPy----Y~kp---s~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
-++.++-.. -.|+.++++|+|++++-.-. +-.+ .++-++++.|-++|+++++.|+++=|.|. -++.
T Consensus 19 i~~~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf-gsy~ 91 (275)
T 1o66_A 19 IAMLTAYES------SFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPF-GAYQ 91 (275)
T ss_dssp EEEEECCSH------HHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCT-TSSS
T ss_pred EEEEeCcCH------HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCC-CCcc
Confidence 355566663 34677788999999875321 1111 14799999999999999999999999994 3555
Q ss_pred cCHHHHH----HHHhCCCEEEEEeC-C---HHHHHHHHh
Q psy11975 589 ISVDTLV----KLAHHENIRGVKDT-D---NIKLANMAN 619 (786)
Q Consensus 589 LSpelL~----rLAeiPNVVGIKDS-D---l~ri~~ll~ 619 (786)
.+++... +|.+ -.+.|||.+ . ..+++.+.+
T Consensus 92 ~s~~~a~~na~rl~k-aGa~aVklEdg~e~~~~I~al~~ 129 (275)
T 1o66_A 92 QSKEQAFAAAAELMA-AGAHMVKLEGGVWMAETTEFLQM 129 (275)
T ss_dssp SCHHHHHHHHHHHHH-TTCSEEEEECSGGGHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH-cCCcEEEECCcHHHHHHHHHHHH
Confidence 6676544 5667 789999988 2 466666655
No 89
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=86.23 E-value=2.9 Score=43.43 Aligned_cols=84 Identities=12% Similarity=0.030 Sum_probs=62.5
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC----CCCCCC---CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCcc
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCP----YYFQKK---MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP----yY~kps---~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~L 589 (786)
++.++-... -|+.++++|+|++++..- .+-.++ ++-++++.|.+.|++++++| ++-|+|.-+|..+
T Consensus 23 ~~~~ayD~~------sA~~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~~p-viaD~~~Gyg~~~ 95 (255)
T 2qiw_A 23 VLPTVWDTW------SAGLVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVSIP-VSVDVESGYGLSP 95 (255)
T ss_dssp ECCEESSHH------HHHHHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCSSC-EEEECTTCTTCCH
T ss_pred EEecCcCHH------HHHHHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCCCC-EEeccCCCcCcHH
Confidence 444666532 355667789999998841 122222 57999999999999999988 6778886666555
Q ss_pred CHHHHHHHHhCCCEEEEEeC
Q psy11975 590 SVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 590 SpelL~rLAeiPNVVGIKDS 609 (786)
..++.+|.+ -.+.|||.+
T Consensus 96 -~~~~~~l~~-aGa~gv~iE 113 (255)
T 2qiw_A 96 -ADLIAQILE-AGAVGINVE 113 (255)
T ss_dssp -HHHHHHHHH-TTCCEEEEC
T ss_pred -HHHHHHHHH-cCCcEEEEC
Confidence 778888887 689999998
No 90
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=85.66 E-value=7.9 Score=42.17 Aligned_cols=131 Identities=11% Similarity=0.036 Sum_probs=79.2
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC---CCC-C-CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYY---FQK-K-MTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY---~kp-s-~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
..++|+.+++....+ +..+.++.+|||++.+--.++ ..| + .+.+.+.+..+.|.+.+++||++=.+ |..
T Consensus 144 ~~~~ianig~~~~~e--~~~~~ve~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~v----g~g 217 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQ--AGLQAVRDLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKLQLPFILKEV----GFG 217 (365)
T ss_dssp -CCEEEEEETTSCHH--HHHHHHHHHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHCCSCEEEEEC----SSC
T ss_pred CCcEEEEeCCCCCHH--HHHHHHHhcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhhCCCEEEEEC----CCC
Confidence 567888777654433 445556678999998765432 111 1 12456778889999999999999974 445
Q ss_pred cCHHHHHHHHhC--CCEE-----EE--------E--------eC---CHHHHHHHHhhcCCCCEEEEeCCc----chhhh
Q psy11975 589 ISVDTLVKLAHH--ENIR-----GV--------K--------DT---DNIKLANMANQTKDLNFSVFAGSA----GYLLS 638 (786)
Q Consensus 589 LSpelL~rLAei--PNVV-----GI--------K--------DS---Dl~ri~~ll~~~~~~df~Vf~G~D----elLL~ 638 (786)
++++...++.+. ..|+ |- + +. .+..+..+ + ...+++.|+.-.+ .-.+.
T Consensus 218 ~s~e~A~~l~~aGad~I~V~g~GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v-~-~~~~~ipvia~GGI~~g~Dv~K 295 (365)
T 3sr7_A 218 MDVKTIQTAIDLGVKTVDISGRGGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNA-Q-PLMDKVEILASGGIRHPLDIIK 295 (365)
T ss_dssp CCHHHHHHHHHHTCCEEECCCBC--------------CGGGTTCSCBHHHHHHHH-G-GGTTTSEEEECSSCCSHHHHHH
T ss_pred CCHHHHHHHHHcCCCEEEEeCCCCcccchhhccccccccccccccccHHHHHHHH-H-HhcCCCeEEEeCCCCCHHHHHH
Confidence 788888888742 2221 10 0 00 11222222 2 2234566554332 23677
Q ss_pred hhccCCcccccccc
Q psy11975 639 GLLVGCAGGINALS 652 (786)
Q Consensus 639 aL~~GAdG~Isg~a 652 (786)
+|++||++++.+..
T Consensus 296 aLalGAdaV~ig~~ 309 (365)
T 3sr7_A 296 ALVLGAKAVGLSRT 309 (365)
T ss_dssp HHHHTCSEEEESHH
T ss_pred HHHcCCCEEEECHH
Confidence 89999999998874
No 91
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=85.65 E-value=6.8 Score=42.58 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=46.2
Q ss_pred CCCeEEEeCCCC-CHHHHHHHHHHHHHcCCCEEEEc------CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 513 WQADLLKPQKHT-TTRATIDLTQKAAKAGANAALIL------CPYYFQKKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 513 GRVPVIaGVGa~-ST~EAIELAr~Ae~aGADAVmVi------PPyY~kps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
+++-||+|.+.. +.+.++++|+.++++|||++-.. .||-|+- +. ++-++.++++++..++|++-
T Consensus 105 ~~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~g-lg-~egl~~l~~~~~e~Gl~~~t 175 (350)
T 1vr6_A 105 GYFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQG-LG-EKGLEYLREAADKYGMYVVT 175 (350)
T ss_dssp TEEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCC-CT-HHHHHHHHHHHHHHTCEEEE
T ss_pred CCeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcC-CC-HHHHHHHHHHHHHcCCcEEE
Confidence 356788888774 78889999999999999986543 2322221 12 44567777888888999885
No 92
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=85.49 E-value=3.6 Score=43.14 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=74.1
Q ss_pred CCCeEEEeCCCCC--------HHHHHHHHHHHHHcCCCEEEEc-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 513 WQADLLKPQKHTT--------TRATIDLTQKAAKAGANAALIL-CPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 513 GRVPVIaGVGa~S--------T~EAIELAr~Ae~aGADAVmVi-PPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
|+..||+=+--.| -.+..++|+.+++.||+++.++ -|.||..+ .+|.++|.+++++||+.-++
T Consensus 57 ~~~~vIaE~KraSPSkG~i~~~~dp~~~A~~y~~~GA~~IsVltd~~~f~Gs------~~~L~~ir~~v~lPVl~Kdf-- 128 (272)
T 3tsm_A 57 GQFALIAEIKKASPSKGLIRPDFDPPALAKAYEEGGAACLSVLTDTPSFQGA------PEFLTAARQACSLPALRKDF-- 128 (272)
T ss_dssp TCCEEEEEECSEETTTEESCSSCCHHHHHHHHHHTTCSEEEEECCSTTTCCC------HHHHHHHHHTSSSCEEEESC--
T ss_pred CCceEEEEeccCCCCCCccCCCCCHHHHHHHHHHCCCCEEEEeccccccCCC------HHHHHHHHHhcCCCEEECCc--
Confidence 4566776443322 2367899999999999999775 46666655 45778898899999986653
Q ss_pred CcCCccCHHHHHHHHhCC-CEEEEEeC--CHHHHHHHHhhcCCCCEEEE-eCCc-chhhhhhccCCc
Q psy11975 584 VTNIDISVDTLVKLAHHE-NIRGVKDT--DNIKLANMANQTKDLNFSVF-AGSA-GYLLSGLLVGCA 645 (786)
Q Consensus 584 ~TGv~LSpelL~rLAeiP-NVVGIKDS--Dl~ri~~ll~~~~~~df~Vf-~G~D-elLL~aL~~GAd 645 (786)
-+++..+.++.... ..+-+--+ +...+.+++.....-++.++ .-++ +-+..++.+|++
T Consensus 129 ----i~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lGl~~lvevh~~eEl~~A~~~ga~ 191 (272)
T 3tsm_A 129 ----LFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFALGMDALIEVHDEAEMERALKLSSR 191 (272)
T ss_dssp ----CCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHTTSCCS
T ss_pred ----cCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCC
Confidence 35566676665442 34444444 55555555432111233432 2233 335567788876
No 93
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=85.47 E-value=2 Score=45.03 Aligned_cols=95 Identities=13% Similarity=0.040 Sum_probs=68.0
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC----CCCC---CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPY----YFQK---KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPy----Y~kp---s~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
-++.++-.. -.|+.++++|+|++++-... +-.+ .++-++++.|-+.|+++++.|+++=|.|. -++.
T Consensus 19 i~~~tayD~------~sA~l~e~aG~d~ilvGdsl~~~~lG~~dt~~vtldemi~h~~aV~r~~~~~~vvaD~pf-gsy~ 91 (264)
T 1m3u_A 19 FATITAYDY------SFAKLFADEGLNVMLVGDSLGMTVQGHDSTLPVTVADIAYHTAAVRRGAPNCLLLADLPF-MAYA 91 (264)
T ss_dssp EEEEECCSH------HHHHHHHHHTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCTTSEEEEECCT-TSSS
T ss_pred EEEEeCcCH------HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCcCHHHHHHHHHHHHhhCCCCcEEEECCC-CCcC
Confidence 355566653 34677788999999995321 1112 14689999999999999999999999995 3455
Q ss_pred cCHHHHH----HHHhCCCEEEEEeC-C---HHHHHHHHh
Q psy11975 589 ISVDTLV----KLAHHENIRGVKDT-D---NIKLANMAN 619 (786)
Q Consensus 589 LSpelL~----rLAeiPNVVGIKDS-D---l~ri~~ll~ 619 (786)
+++... +|.+ -.+.|||.+ . ..+++.+.+
T Consensus 92 -~~~~a~~~a~rl~k-aGa~aVklEgg~e~~~~I~al~~ 128 (264)
T 1m3u_A 92 -TPEQAFENAATVMR-AGANMVKIEGGEWLVETVQMLTE 128 (264)
T ss_dssp -SHHHHHHHHHHHHH-TTCSEEECCCSGGGHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHH-cCCCEEEECCcHHHHHHHHHHHH
Confidence 776554 5667 789999998 2 466666654
No 94
>3uau_A JLPA, surface-exposed lipoprotein; adhesin, bacterial cell surface, cell adhesion; 2.70A {Campylobacter jejuni subsp}
Probab=85.38 E-value=0.19 Score=52.82 Aligned_cols=31 Identities=35% Similarity=0.654 Sum_probs=7.3
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCCcccc
Q psy11975 204 HHHSHHHRSHSHHHHQSQSKHHHSKPLSRTM 234 (786)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (786)
|||+|||++||..|-...-+|.-+.+|+.+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~aC~N~ld~~t 33 (379)
T 3uau_A 3 HHHHHHHHHHSSGHIDDDDKHMCGNSIDEKT 33 (379)
T ss_dssp ---------------------CCCCCSCHHH
T ss_pred ccccccccccccCCcchhhhhhhCCcccHHH
Confidence 5565666666666666677777788887654
No 95
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=85.32 E-value=5.3 Score=41.82 Aligned_cols=123 Identities=17% Similarity=0.170 Sum_probs=71.3
Q ss_pred CCeEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQKHTTTR--ATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGVGa~ST~--EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
.+||++=...+... ..-++++.++++|+|++++.- +..++. +-|...+++.++.++..=.|. -+.
T Consensus 97 ~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipD-------lp~ee~-~~~~~~~~~~gl~~I~lvap~-----t~~ 163 (271)
T 3nav_A 97 ETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIAD-------VPTNES-QPFVAAAEKFGIQPIFIAPPT-----ASD 163 (271)
T ss_dssp TSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETT-------SCGGGC-HHHHHHHHHTTCEEEEEECTT-----CCH
T ss_pred CCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECC-------CCHHHH-HHHHHHHHHcCCeEEEEECCC-----CCH
Confidence 57887643332222 235689999999999998842 113443 445556677788765555553 246
Q ss_pred HHHHHHHh-CCCEEEE---------EeC---CHHH-HHHHHhhcCCCCEEEEeCCc----chhhhhhccCCcccccccc
Q psy11975 592 DTLVKLAH-HENIRGV---------KDT---DNIK-LANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 592 elL~rLAe-iPNVVGI---------KDS---Dl~r-i~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~a 652 (786)
+.+.++++ -..++++ ... ++.. +.++.+ .. +..+..|.. +.+...+..|++|+|.|++
T Consensus 164 eri~~i~~~~~gfiY~vs~~GvTG~~~~~~~~~~~~v~~vr~-~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIVGSA 239 (271)
T 3nav_A 164 ETLRAVAQLGKGYTYLLSRAGVTGAETKANMPVHALLERLQQ-FD--APPALLGFGISEPAQVKQAIEAGAAGAISGSA 239 (271)
T ss_dssp HHHHHHHHHCCSCEEECCCC--------CCHHHHHHHHHHHH-TT--CCCEEECSSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHCCCeEEEEeccCCCCcccCCchhHHHHHHHHHH-hc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 77878774 3444443 322 2322 333333 22 455666654 2344478899999999975
No 96
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=84.89 E-value=2.2 Score=47.19 Aligned_cols=130 Identities=13% Similarity=0.153 Sum_probs=79.2
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
.|++.|-+.++... .+.++.+.++|+|.|.+-.-. . ..+.+.+..+.+.++.++||++-+. .+.
T Consensus 132 ~g~l~v~~~v~~~~----~e~~~~lveaGvdvIvldta~--G---~~~~~~e~I~~ik~~~~i~Vi~g~V-------~t~ 195 (400)
T 3ffs_A 132 KGRLRVGAAIGVNE----IERAKLLVEAGVDVIVLDSAH--G---HSLNIIRTLKEIKSKMNIDVIVGNV-------VTE 195 (400)
T ss_dssp TSSBCCEEEECCC-----CHHHHHHHHHTCSEEEECCSC--C---SBHHHHHHHHHHHTTCCCEEEEEEE-------CSH
T ss_pred ccceeEEeecCCCH----HHHHHHHHHcCCCEEEEeCCC--C---CcccHHHHHHHHHhcCCCeEEEeec-------CCH
Confidence 35555444444432 788999999999999874322 1 1356778888888877999987443 467
Q ss_pred HHHHHHHhC--CCEE-EE--------Ee-----C-CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCcccccc
Q psy11975 592 DTLVKLAHH--ENIR-GV--------KD-----T-DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGGINA 650 (786)
Q Consensus 592 elL~rLAei--PNVV-GI--------KD-----S-Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~Isg 650 (786)
+...++.+. +.|+ |+ ++ . ++..+.++.+.....++.|+. |-. +.+..++.+|++|++.|
T Consensus 196 e~A~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 196 EATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVMIG 275 (400)
T ss_dssp HHHHHHHHTTCSEEEECC---------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEeCCCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEEEC
Confidence 777777653 3222 10 11 0 234444444322223566655 432 34778899999999998
Q ss_pred ccccccH
Q psy11975 651 LSAVLGG 657 (786)
Q Consensus 651 ~aN~~Pe 657 (786)
...+..+
T Consensus 276 t~f~~t~ 282 (400)
T 3ffs_A 276 SILAGTE 282 (400)
T ss_dssp GGGTTBT
T ss_pred hHHhcCC
Confidence 8765443
No 97
>2qkf_A 3-deoxy-D-manno-octulosonic acid 8- phosphate SYN; manno-octulosonate, synthase, lipopolysaccharide, KDOP, KDO8 KDO8PS; 1.75A {Neisseria meningitidis serogroup B} PDB: 3stf_A 3qpy_A 3ste_A 3qpz_A 3qq0_A 3fyo_A* 3qq1_A 3fyp_A* 3stc_A 3stg_A 1phw_A 1g7v_A* 1gg0_A 1phq_A* 1d9e_A 1pl9_A* 1q3n_A* 1x6u_A* 1x8f_A 1g7u_A*
Probab=84.79 E-value=2 Score=45.18 Aligned_cols=94 Identities=15% Similarity=0.134 Sum_probs=62.4
Q ss_pred CCeEEEeCCCC-CHHHHHHHHHHHHHcCCCEEE--EcCCCCCC-CC--------CCHHHHHHHHHHHHhcCCCCEEE---
Q psy11975 514 QADLLKPQKHT-TTRATIDLTQKAAKAGANAAL--ILCPYYFQ-KK--------MTEDLIYEHFISVADNSPIPVII--- 578 (786)
Q Consensus 514 RVPVIaGVGa~-ST~EAIELAr~Ae~aGADAVm--ViPPyY~k-ps--------~S~eeLv~YFraIAeAtdLPIiL--- 578 (786)
|+-||+|..+. +.+.++++|+.++++|+++++ +.-.+|.+ |. +.-++-.+.++++++..++|++-
T Consensus 15 ~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~~~~g~~l~~gl~~l~~~~~~~Gl~~~te~~ 94 (280)
T 2qkf_A 15 PFVLFGGINVLESLDSTLQTCAHYVEVTRKLGIPYIFKASFDKANRSSIHSYRGVGLEEGLKIFEKVKAEFGIPVITDVH 94 (280)
T ss_dssp CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCSSCSSSSSCCCSCHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred ceEEEEecCCCCCHHHHHHHHHHHHHhhhhcceeEEEeeeeecCCCCChHHhhccchHHHHHHHHHHHHHcCCcEEEecC
Confidence 56789987764 788899999999998766531 11122222 11 12244456778888888999875
Q ss_pred --------------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 --------------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 --------------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|-+|+..- -..+++.++++...-+++|-.
T Consensus 95 d~~~~~~l~~~~d~~kIga~~~--~n~~ll~~~a~~~kPV~lk~G 137 (280)
T 2qkf_A 95 EPHQCQPVAEVCDVIQLPAFLA--RQTDLVVAMAKTGNVVNIKKP 137 (280)
T ss_dssp SGGGHHHHHHHCSEEEECGGGT--TBHHHHHHHHHTCCEEEEECC
T ss_pred CHHHHHHHHhhCCEEEECcccc--cCHHHHHHHHcCCCcEEEECC
Confidence 44554222 235688888888899999988
No 98
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=84.70 E-value=3 Score=44.54 Aligned_cols=74 Identities=16% Similarity=0.202 Sum_probs=48.9
Q ss_pred CCeEEEeCCC---CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCcc
Q psy11975 514 QADLLKPQKH---TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDI 589 (786)
Q Consensus 514 RVPVIaGVGa---~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~L 589 (786)
.+-|++=+-+ ..++++|+.++.++++|||+|.+-.+ . +.+++.++.+++. ++|+++ |+ +......+
T Consensus 162 d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~~~----~--~~~~~~~i~~~~~---~~Pv~~-n~~~~g~~p~~ 231 (307)
T 3lye_A 162 DFVLIARTDALQSLGYEECIERLRAARDEGADVGLLEGF----R--SKEQAAAAVAALA---PWPLLL-NSVENGHSPLI 231 (307)
T ss_dssp CCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEECCC----S--CHHHHHHHHHHHT---TSCBEE-EEETTSSSCCC
T ss_pred CeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEecCC----C--CHHHHHHHHHHcc---CCceeE-EeecCCCCCCC
Confidence 3445554333 35789999999999999999988653 2 3677766666553 478744 43 32222357
Q ss_pred CHHHHHHH
Q psy11975 590 SVDTLVKL 597 (786)
Q Consensus 590 SpelL~rL 597 (786)
+.+.|.+|
T Consensus 232 t~~eL~~l 239 (307)
T 3lye_A 232 TVEEAKAM 239 (307)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHc
Confidence 77777777
No 99
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=84.67 E-value=2.9 Score=44.91 Aligned_cols=74 Identities=15% Similarity=0.048 Sum_probs=49.3
Q ss_pred CCCeEEEeCCCC---CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCc
Q psy11975 513 WQADLLKPQKHT---TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNID 588 (786)
Q Consensus 513 GRVPVIaGVGa~---ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~ 588 (786)
+.+.|++=+-+. .++++|+.|+.++++|||+|++-.+ ++ .++ +++|+++.++|+++ |+ +......
T Consensus 172 ~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e~~----~~--~e~----~~~i~~~l~~P~la-n~~~~g~~~~ 240 (318)
T 1zlp_A 172 SDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVEAP----AN--VDE----LKEVSAKTKGLRIA-NMIEGGKTPL 240 (318)
T ss_dssp SCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC----CS--HHH----HHHHHHHSCSEEEE-EECTTSSSCC
T ss_pred CCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEcCC----CC--HHH----HHHHHHhcCCCEEE-EeccCCCCCC
Confidence 445566644332 2479999999999999999998753 33 444 45566677899877 54 2111235
Q ss_pred cCHHHHHHH
Q psy11975 589 ISVDTLVKL 597 (786)
Q Consensus 589 LSpelL~rL 597 (786)
++.+.|.+|
T Consensus 241 ~~~~eL~~l 249 (318)
T 1zlp_A 241 HTPEEFKEM 249 (318)
T ss_dssp CCHHHHHHH
T ss_pred CCHHHHHHc
Confidence 777777777
No 100
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=84.56 E-value=3 Score=46.63 Aligned_cols=67 Identities=12% Similarity=0.037 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCc-CCccCHHHHHH
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVT-NIDISVDTLVK 596 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~T-Gv~LSpelL~r 596 (786)
..++++|+.++.+++ |||+|.+-++ .++ .+++.++.++|....+..++.||. |..+ ...++.+.++.
T Consensus 268 ~gld~AI~Ra~AY~~-GAD~if~E~~---~~~--~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~ 336 (435)
T 3lg3_A 268 AGIEQAISRGLAYAP-YADLVWCETS---TPD--LALAKRFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIAS 336 (435)
T ss_dssp CSHHHHHHHHHHHGG-GCSEEEECCS---SCC--HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHH
T ss_pred CCHHHHHHHHHHHHc-cCCEEEecCC---CCC--HHHHHHHHHHhccccCCeEEEeCCCCCccccccCCHHHHHH
Confidence 579999999999988 9999999664 244 899999999998778899999997 5432 12355555433
No 101
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=84.12 E-value=6.5 Score=40.35 Aligned_cols=133 Identities=13% Similarity=0.126 Sum_probs=78.4
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHH
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVK 596 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~r 596 (786)
+++|+|.-- ..+.++.|.++|||.|+. |.+ +.+++++.++ .++|++. |+ .++..+.+
T Consensus 86 ~~iGaGTVl---t~~~a~~Ai~AGA~fIvs--P~~------~~~vi~~~~~----~gi~~ip-------Gv-~TptEi~~ 142 (232)
T 4e38_A 86 MLIGAGTIL---NGEQALAAKEAGATFVVS--PGF------NPNTVRACQE----IGIDIVP-------GV-NNPSTVEA 142 (232)
T ss_dssp CEEEEECCC---SHHHHHHHHHHTCSEEEC--SSC------CHHHHHHHHH----HTCEEEC-------EE-CSHHHHHH
T ss_pred CEEeECCcC---CHHHHHHHHHcCCCEEEe--CCC------CHHHHHHHHH----cCCCEEc-------CC-CCHHHHHH
Confidence 455555432 378889999999998863 331 4567776554 3666653 33 36766666
Q ss_pred HHhCCCEEEEEeC--C----HHHHHHHHhhcCCCCEEE--EeCCc-chhhhhhccCCccccccccccccHHHHHHHHHHH
Q psy11975 597 LAHHENIRGVKDT--D----NIKLANMANQTKDLNFSV--FAGSA-GYLLSGLLVGCAGGINALSAVLGGPICELYDLAK 667 (786)
Q Consensus 597 LAeiPNVVGIKDS--D----l~ri~~ll~~~~~~df~V--f~G~D-elLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~ 667 (786)
..+. ..-.||.- . +..+.++.. .-+++.+ -.|-+ +.+-+.|.+|+.+++.|. .+.|.. +++
T Consensus 143 A~~~-Gad~vK~FPa~~~gG~~~lkal~~--p~p~ip~~ptGGI~~~n~~~~l~aGa~~~vgGs-~l~~~~------~i~ 212 (232)
T 4e38_A 143 ALEM-GLTTLKFFPAEASGGISMVKSLVG--PYGDIRLMPTGGITPSNIDNYLAIPQVLACGGT-WMVDKK------LVT 212 (232)
T ss_dssp HHHT-TCCEEEECSTTTTTHHHHHHHHHT--TCTTCEEEEBSSCCTTTHHHHHTSTTBCCEEEC-GGGCHH------HHH
T ss_pred HHHc-CCCEEEECcCccccCHHHHHHHHH--HhcCCCeeeEcCCCHHHHHHHHHCCCeEEEECc-hhcChH------Hhh
Confidence 5544 23334545 2 455555543 2234443 33444 346778899999877765 455543 346
Q ss_pred cCCHHHHHHHHHHhh
Q psy11975 668 AGKWEEAMKLQHRLV 682 (786)
Q Consensus 668 aGD~eeAreLQ~rL~ 682 (786)
+||+++..++-+++.
T Consensus 213 ~~~~~~i~~~a~~~~ 227 (232)
T 4e38_A 213 NGEWDEIARLTREIV 227 (232)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 899987666555443
No 102
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=84.06 E-value=7.1 Score=40.73 Aligned_cols=123 Identities=17% Similarity=0.083 Sum_probs=72.4
Q ss_pred CCeEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQKHTTTR--ATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGVGa~ST~--EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
++||++=+..+... ..-++++.++++|+|++++.. -| .++..+ |.+.+++.++.+++.=.|. -+.
T Consensus 95 ~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~D----lp---~ee~~~-~~~~~~~~gl~~i~liaP~-----t~~ 161 (267)
T 3vnd_A 95 DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIAD----VP---VEESAP-FSKAAKAHGIAPIFIAPPN-----ADA 161 (267)
T ss_dssp TCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT----SC---GGGCHH-HHHHHHHTTCEEECEECTT-----CCH
T ss_pred CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCC----CC---HhhHHH-HHHHHHHcCCeEEEEECCC-----CCH
Confidence 46876643322211 236688999999999998852 11 344444 4455667788766555663 246
Q ss_pred HHHHHHHh-CCCEEEE---EeC---------CH-HHHHHHHhhcCCCCEEEEeCCcc----hhhhhhccCCcccccccc
Q psy11975 592 DTLVKLAH-HENIRGV---KDT---------DN-IKLANMANQTKDLNFSVFAGSAG----YLLSGLLVGCAGGINALS 652 (786)
Q Consensus 592 elL~rLAe-iPNVVGI---KDS---------Dl-~ri~~ll~~~~~~df~Vf~G~De----lLL~aL~~GAdG~Isg~a 652 (786)
+.+.++++ .+.++++ ... ++ ..+.++.+ . .+..++.|..- .+...+..|+||+|.|++
T Consensus 162 eri~~i~~~~~gfvY~vS~~GvTG~~~~~~~~~~~~v~~vr~-~--~~~pv~vGfGI~~~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 162 DTLKMVSEQGEGYTYLLSRAGVTGTESKAGEPIENILTQLAE-F--NAPPPLLGFGIAEPEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp HHHHHHHHHCCSCEEESCCCCCC--------CHHHHHHHHHT-T--TCCCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHhCCCcEEEEecCCCCCCccCCcHHHHHHHHHHHH-h--cCCCEEEECCcCCHHHHHHHHHcCCCEEEECHH
Confidence 78888874 4455555 211 23 22333322 2 24556666642 333478899999999975
No 103
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=83.83 E-value=8 Score=41.48 Aligned_cols=149 Identities=7% Similarity=-0.028 Sum_probs=90.1
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCC--------CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILC--PYYFQ--------KKMTEDLIYEHFISVADNSPIPVIIYNNTFV 584 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViP--PyY~k--------ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~ 584 (786)
.|+++++.+...++..+.|+.++++|+|+|-+-. |.... .-...+-+.+-.++|.+++++||.+=--++.
T Consensus 58 ~p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~ 137 (350)
T 3b0p_A 58 HPIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGL 137 (350)
T ss_dssp CSEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCB
T ss_pred CeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCc
Confidence 5889988888899999999999999999998763 44210 0013667788888888888999988332322
Q ss_pred cCCccCH----HHHHHHHh--CCCEEE--------E--E---e--C-CHHHHHHHHhhcCCCCEEEEeCCc----chhhh
Q psy11975 585 TNIDISV----DTLVKLAH--HENIRG--------V--K---D--T-DNIKLANMANQTKDLNFSVFAGSA----GYLLS 638 (786)
Q Consensus 585 TGv~LSp----elL~rLAe--iPNVVG--------I--K---D--S-Dl~ri~~ll~~~~~~df~Vf~G~D----elLL~ 638 (786)
... .+. +...+|.+ +..|.- + + . . ++..+.++.+. . +++.|+...+ +.+..
T Consensus 138 ~~~-~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~-~~iPVianGgI~s~eda~~ 214 (350)
T 3b0p_A 138 EGK-ETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-F-PQLTFVTNGGIRSLEEALF 214 (350)
T ss_dssp TTC-CCHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-C-TTSEEEEESSCCSHHHHHH
T ss_pred Ccc-ccHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-C-CCCeEEEECCcCCHHHHHH
Confidence 111 122 22333332 222221 1 1 0 1 45555666552 2 2455443333 23455
Q ss_pred hhccCCcccccccccc-ccHHHHHHHHHHH
Q psy11975 639 GLLVGCAGGINALSAV-LGGPICELYDLAK 667 (786)
Q Consensus 639 aL~~GAdG~Isg~aN~-~Pel~vaL~eA~~ 667 (786)
.+. |++|++.|.+.+ -|+++.++.+.+.
T Consensus 215 ~l~-GaD~V~iGRa~l~~P~l~~~i~~~l~ 243 (350)
T 3b0p_A 215 HLK-RVDGVMLGRAVYEDPFVLEEADRRVF 243 (350)
T ss_dssp HHT-TSSEEEECHHHHHCGGGGTTHHHHTT
T ss_pred HHh-CCCEEEECHHHHhCcHHHHHHHHHhc
Confidence 566 999999987654 5777777766554
No 104
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=83.81 E-value=1.7 Score=45.08 Aligned_cols=125 Identities=17% Similarity=0.115 Sum_probs=83.8
Q ss_pred EEeC--CCCCHHHHHHHHHHHHHcCCCEEEEcCCCC-CCCCCCHHHHHHHHHHHHhcCC---CCEEEEeCCCCcCCccCH
Q psy11975 518 LKPQ--KHTTTRATIDLTQKAAKAGANAALILCPYY-FQKKMTEDLIYEHFISVADNSP---IPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 518 IaGV--Ga~ST~EAIELAr~Ae~aGADAVmViPPyY-~kps~S~eeLv~YFraIAeAtd---LPIiLYNiP~~TGv~LSp 591 (786)
++|. |..+++.-+..++.|.+.|||.|-+..++- ++-. +.+.+.+-.++|.++++ +++|| . ++. |+.
T Consensus 84 VigFP~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g-~~~~v~~eI~~v~~a~~~~~lKVIl-E----t~~-Lt~ 156 (239)
T 3ngj_A 84 VIGFPLGATPSEVKAYETKVAVEQGAEEVDMVINIGMVKAK-KYDDVEKDVKAVVDASGKALTKVII-E----CCY-LTN 156 (239)
T ss_dssp EESTTTCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT-CHHHHHHHHHHHHHHHTTSEEEEEC-C----GGG-SCH
T ss_pred EeccCCCCCchHHHHHHHHHHHHcCCCEEEEEeehHHhccc-cHHHHHHHHHHHHHHhcCCceEEEE-e----cCC-CCH
Confidence 4455 777889999999999999999998887763 2333 47788888899988885 55544 3 454 788
Q ss_pred HHHHHHHh---CCCEEEEEeC--------CHHHHHHHHhhcCCCC--EEEEeCCcc--hhhhhhccCCc--ccccc
Q psy11975 592 DTLVKLAH---HENIRGVKDT--------DNIKLANMANQTKDLN--FSVFAGSAG--YLLSGLLVGCA--GGINA 650 (786)
Q Consensus 592 elL~rLAe---iPNVVGIKDS--------Dl~ri~~ll~~~~~~d--f~Vf~G~De--lLL~aL~~GAd--G~Isg 650 (786)
+.+.++++ .-..-.||-+ .+..+..+.+ ..+++ +..-.|--. .++..+.+|++ |..++
T Consensus 157 eei~~a~~ia~~aGADfVKTSTGf~~ggAt~~dv~lmr~-~vg~~v~VKasGGIrt~~da~~~i~aGA~riGtS~~ 231 (239)
T 3ngj_A 157 EEKVEVCKRCVAAGAEYVKTSTGFGTHGATPEDVKLMKD-TVGDKALVKAAGGIRTFDDAMKMINNGASRIGASAG 231 (239)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHH-HHGGGSEEEEESSCCSHHHHHHHHHTTEEEEEESCH
T ss_pred HHHHHHHHHHHHHCcCEEECCCCCCCCCCCHHHHHHHHH-hhCCCceEEEeCCCCCHHHHHHHHHhcccceecccH
Confidence 88877753 2467778877 2344444433 22344 444445432 36777889998 65544
No 105
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=83.66 E-value=6 Score=41.12 Aligned_cols=126 Identities=15% Similarity=0.090 Sum_probs=75.8
Q ss_pred CCeEEEeCCCCCHHH--HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQKHTTTRA--TIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGVGa~ST~E--AIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
++|++.=...+.... .-++++.|+++|+|++++.-= | .|+ .+-|...+++.++.++..=.|. -+.
T Consensus 88 ~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDL----P---~eE-~~~~~~~~~~~Gl~~I~lvaP~-----t~~ 154 (252)
T 3tha_A 88 KKALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPEL----S---FEE-SDDLIKECERYNIALITLVSVT-----TPK 154 (252)
T ss_dssp SSEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTC----C---GGG-CHHHHHHHHHTTCEECEEEETT-----SCH
T ss_pred CCCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCC----C---HHH-HHHHHHHHHHcCCeEEEEeCCC-----CcH
Confidence 379888666654422 356899999999999998751 2 234 3456667788888776655553 247
Q ss_pred HHHHHHHhC-CCEEEEEe----C--C---HHHHHHHHhhc-CCCCEEEEeCCcc---hhhhhhccCCcccccccc
Q psy11975 592 DTLVKLAHH-ENIRGVKD----T--D---NIKLANMANQT-KDLNFSVFAGSAG---YLLSGLLVGCAGGINALS 652 (786)
Q Consensus 592 elL~rLAei-PNVVGIKD----S--D---l~ri~~ll~~~-~~~df~Vf~G~De---lLL~aL~~GAdG~Isg~a 652 (786)
+.+.++++. +.++++=- + . ...+.+++++. ...+..++.|..- --+..+..++||+|.|.+
T Consensus 155 eRi~~ia~~a~gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~~ADGVIVGSA 229 (252)
T 3tha_A 155 ERVKKLVKHAKGFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRKVADGVIVGTS 229 (252)
T ss_dssp HHHHHHHTTCCSCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTTTSSEEEECHH
T ss_pred HHHHHHHHhCCCeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHhcCCEEEECHH
Confidence 889999864 56666643 1 1 12222232211 1124455555542 223345567999999975
No 106
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=83.64 E-value=15 Score=44.87 Aligned_cols=136 Identities=15% Similarity=0.119 Sum_probs=85.3
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCC-------CCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILC--PYYFQKK-------MTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViP--PyY~kps-------~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..|+++++ .+.+.++..+.++.++++|+|+|.+-- |...... .+.+.+.+..+.|-+++++||++=-.|.
T Consensus 634 ~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~ 713 (1025)
T 1gte_A 634 DNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPN 713 (1025)
T ss_dssp TSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSC
T ss_pred CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCC
Confidence 35888887 456889999999999999999999853 4331100 1367788899999888899999877663
Q ss_pred CcCCccCHHHHHHHH-h--CCCEEEE------------------------EeC-------C----HHHHHHHHhhcCCCC
Q psy11975 584 VTNIDISVDTLVKLA-H--HENIRGV------------------------KDT-------D----NIKLANMANQTKDLN 625 (786)
Q Consensus 584 ~TGv~LSpelL~rLA-e--iPNVVGI------------------------KDS-------D----l~ri~~ll~~~~~~d 625 (786)
.. ....+++.+ + ...|+-+ ... + +..+.++.+ .. ++
T Consensus 714 ~~----~~~~~a~~~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~-~~-~~ 787 (1025)
T 1gte_A 714 VT----DIVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIAR-AL-PG 787 (1025)
T ss_dssp SS----CHHHHHHHHHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHH-HS-TT
T ss_pred hH----HHHHHHHHHHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHH-Hc-CC
Confidence 22 334444443 2 3333331 011 2 233444444 22 34
Q ss_pred EEEE-eCC-c--chhhhhhccCCccccccccccc
Q psy11975 626 FSVF-AGS-A--GYLLSGLLVGCAGGINALSAVL 655 (786)
Q Consensus 626 f~Vf-~G~-D--elLL~aL~~GAdG~Isg~aN~~ 655 (786)
+.|+ +|. . +.+...|.+|+++++.+.+.+.
T Consensus 788 ipvi~~GGI~s~~da~~~l~~Ga~~v~vg~~~l~ 821 (1025)
T 1gte_A 788 FPILATGGIDSAESGLQFLHSGASVLQVCSAVQN 821 (1025)
T ss_dssp CCEEEESSCCSHHHHHHHHHTTCSEEEESHHHHT
T ss_pred CCEEEecCcCCHHHHHHHHHcCCCEEEEeecccc
Confidence 4433 332 2 2366778899999999987764
No 107
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=83.57 E-value=7.2 Score=41.86 Aligned_cols=140 Identities=12% Similarity=0.043 Sum_probs=86.3
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC-C----CCCCC---CCHHHHHHHHHHHHhcC-CCCEEEEeCCCCc
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCP-Y----YFQKK---MTEDLIYEHFISVADNS-PIPVIIYNNTFVT 585 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP-y----Y~kps---~S~eeLv~YFraIAeAt-dLPIiLYNiP~~T 585 (786)
.-++.++-... -|+.++++|+|++.+..- . +-.|+ ++-++++.+.+.|++++ ++||+ -|+|.
T Consensus 40 ~i~~~~ayD~~------sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~Pvi-aD~d~-- 110 (318)
T 1zlp_A 40 SVLMPGVQDAL------SAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVV-VDGDT-- 110 (318)
T ss_dssp SEEEEEECSHH------HHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEE-EECTT--
T ss_pred cEEEecCCCHH------HHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEE-EeCCC--
Confidence 34566776632 356677789999998862 1 12232 47999999999999999 77776 68874
Q ss_pred CCccCHHHHHHH----HhCCCEEEEEeC--C-------------------HHHHHHHHhhcCCCCEEEEeCCcchhh---
Q psy11975 586 NIDISVDTLVKL----AHHENIRGVKDT--D-------------------NIKLANMANQTKDLNFSVFAGSAGYLL--- 637 (786)
Q Consensus 586 Gv~LSpelL~rL----AeiPNVVGIKDS--D-------------------l~ri~~ll~~~~~~df~Vf~G~DelLL--- 637 (786)
|+. +++.+.+. .+ -.+.|||.+ . ..++..+++....++|.|..=.|....
T Consensus 111 Gyg-~~~~v~~tv~~l~~-aGaagv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda~a~~gl 188 (318)
T 1zlp_A 111 GGG-GPLNVQRFIRELIS-AGAKGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDARAPHGL 188 (318)
T ss_dssp CSS-SHHHHHHHHHHHHH-TTCCEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECTHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHH-cCCcEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHHhhhcCH
Confidence 544 65544444 34 689999987 2 123444444333467776654444321
Q ss_pred --------hhhccCCccccccccccccHHHHHHHHHH
Q psy11975 638 --------SGLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 638 --------~aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
....+|+++++.-.- --++++.++.+++
T Consensus 189 ~~ai~Ra~Ay~eAGAd~i~~e~~-~~~e~~~~i~~~l 224 (318)
T 1zlp_A 189 EEGIRRANLYKEAGADATFVEAP-ANVDELKEVSAKT 224 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCC-CSHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCEEEEcCC-CCHHHHHHHHHhc
Confidence 123478888766431 1236666666665
No 108
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=83.50 E-value=3.2 Score=46.51 Aligned_cols=66 Identities=11% Similarity=0.009 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCc-CCccCHHHHH
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVT-NIDISVDTLV 595 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~T-Gv~LSpelL~ 595 (786)
..++++|+.++.+++ |||+|.+-++. ++ .+++.++.++|....++.++.||. |..+ ...++.+.++
T Consensus 268 ~gldeAI~Ra~AY~~-GAD~if~E~~~---~~--~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~ 335 (439)
T 3i4e_A 268 PGLEQAISRGLAYAP-YADLIWCETGK---PD--LEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIA 335 (439)
T ss_dssp CSHHHHHHHHHHHTT-TCSEEEECCSS---CC--HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHH
T ss_pred CCHHHHHHHHHHHHh-hCCEEEecCCC---CC--HHHHHHHHHHhcccCCceEEeeCCCCCCcCcccCCHHHHH
Confidence 469999999999888 99999986642 34 899999999998778999999996 5432 1135555443
No 109
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=83.47 E-value=3.4 Score=44.13 Aligned_cols=74 Identities=11% Similarity=0.135 Sum_probs=47.6
Q ss_pred CeEEEeCCC---CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 515 ADLLKPQKH---TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 515 VPVIaGVGa---~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
+-|++=+-+ ..++|+|++++.+.++|||+|.+-.+ . +.+++.++.+++. +.|+++=-.+......++.
T Consensus 155 ~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~g~----~--~~~ei~~~~~~~~---~~Pl~~n~~~~g~~p~~~~ 225 (302)
T 3fa4_A 155 IVVIARTDSLQTHGYEESVARLRAARDAGADVGFLEGI----T--SREMARQVIQDLA---GWPLLLNMVEHGATPSISA 225 (302)
T ss_dssp CEEEEEECCHHHHCHHHHHHHHHHHHTTTCSEEEETTC----C--CHHHHHHHHHHTT---TSCEEEECCTTSSSCCCCH
T ss_pred EEEEEEecccccCCHHHHHHHHHHHHHcCCCEEeecCC----C--CHHHHHHHHHHhc---CCceeEEEecCCCCCCCCH
Confidence 445553332 36899999999999999999988754 2 3666554444432 4888552233222235788
Q ss_pred HHHHHH
Q psy11975 592 DTLVKL 597 (786)
Q Consensus 592 elL~rL 597 (786)
+.|.+|
T Consensus 226 ~eL~~l 231 (302)
T 3fa4_A 226 AEAKEM 231 (302)
T ss_dssp HHHHHH
T ss_pred HHHHHc
Confidence 888887
No 110
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=82.94 E-value=2.1 Score=47.76 Aligned_cols=128 Identities=13% Similarity=0.139 Sum_probs=79.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LS 590 (786)
.+++.|.++++.. .+..+.++.+.++|+|++.+..-. . ......+..+.|.+.+ ++||++ |...+
T Consensus 223 ~~~l~vga~ig~~--~~~~~~a~~l~~aGvd~v~i~~~~--G---~~~~~~e~i~~i~~~~p~~pvi~-------g~~~t 288 (494)
T 1vrd_A 223 KGRLLVGAAVGTS--PETMERVEKLVKAGVDVIVIDTAH--G---HSRRVIETLEMIKADYPDLPVVA-------GNVAT 288 (494)
T ss_dssp TSCBCCEEEECSS--TTHHHHHHHHHHTTCSEEEECCSC--C---SSHHHHHHHHHHHHHCTTSCEEE-------EEECS
T ss_pred hhhhccccccCcC--HhHHHHHHHHHHhCCCEEEEEecC--C---chHHHHHHHHHHHHHCCCceEEe-------CCcCC
Confidence 3455566666542 556778889999999999985422 1 1356778888888888 699987 33467
Q ss_pred HHHHHHHHhCCCEEEEEeC------------------CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCcccc
Q psy11975 591 VDTLVKLAHHENIRGVKDT------------------DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGGI 648 (786)
Q Consensus 591 pelL~rLAeiPNVVGIKDS------------------Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~I 648 (786)
.+...+|.+. .+-+|+-+ .+..+..+.+.....++.|+. |-. ..+..++++||++++
T Consensus 289 ~e~a~~l~~~-G~d~I~v~~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~ 367 (494)
T 1vrd_A 289 PEGTEALIKA-GADAVKVGVGPGSICTTRVVAGVGVPQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVM 367 (494)
T ss_dssp HHHHHHHHHT-TCSEEEECSSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHc-CCCEEEEcCCCCccccccccCCCCccHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 8888777754 24444431 122222332211122455555 432 346778899999998
Q ss_pred cccccc
Q psy11975 649 NALSAV 654 (786)
Q Consensus 649 sg~aN~ 654 (786)
.|.+.+
T Consensus 368 iGr~~l 373 (494)
T 1vrd_A 368 VGSIFA 373 (494)
T ss_dssp ESHHHH
T ss_pred ECHHHh
Confidence 886543
No 111
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=82.81 E-value=0.76 Score=37.26 Aligned_cols=55 Identities=18% Similarity=0.060 Sum_probs=43.6
Q ss_pred CCCCCCceEEEecc-cCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVK-GYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLS 411 (786)
Q Consensus 355 ~~f~vGDLVWaKvk-G~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFs 411 (786)
..|.+||++-||-. -=-|-+|+|.+.....+.+.|.|-+-++ ...|..++|+++.
T Consensus 2 ~~~~~G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~DYGn--~e~v~~~~Lr~~~ 57 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGN--REEQNLSDLLSPI 57 (59)
T ss_dssp CCCCTTCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETTTTE--EEEEEGGGCBCTT
T ss_pred CcCCcCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEcCCC--EEEEcHHHeeCCC
Confidence 46899999999985 2469999999875545789999988774 4557888888864
No 112
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=82.55 E-value=5.3 Score=42.79 Aligned_cols=118 Identities=11% Similarity=0.149 Sum_probs=72.4
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC---CCCEEEE--eCCCC---cCCccCHHHHHHHH----hC
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS---PIPVIIY--NNTFV---TNIDISVDTLVKLA----HH 600 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt---dLPIiLY--NiP~~---TGv~LSpelL~rLA----ei 600 (786)
++.|.++|||||-++--.|..-. .+.+.++.+.++.+++ ++|+++- =+|.. ...+.+++.+...+ ++
T Consensus 134 Ve~AvrlGADaV~~l~~i~~Gs~-~e~~~l~~la~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAaEL 212 (307)
T 3fok_A 134 VSSMVDRGVDFAKTLVRINLSDA-GTAPTLEATAHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAAGL 212 (307)
T ss_dssp HHHHHHHTCCEEEEEEEECTTCT-THHHHHHHHHHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHHTC
T ss_pred HHHHHHCCCCEEEEEEEECCCCh-hHHHHHHHHHHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHHHh
Confidence 34444569999886543443321 3777888888888766 7999984 33321 12357888876655 34
Q ss_pred C-C----EEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCc----ch----hhhhhc-cCCccccccccccc
Q psy11975 601 E-N----IRGVKDT-DNIKLANMANQTKDLNFSVFAGSA----GY----LLSGLL-VGCAGGINALSAVL 655 (786)
Q Consensus 601 P-N----VVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~D----el----LL~aL~-~GAdG~Isg~aN~~ 655 (786)
. . |+=++++ ++ .++++ ...-.+.+..|.- +- +..++. .|+.|.+.|=.-+.
T Consensus 213 GADs~~tivK~~y~e~f---~~Vv~-a~~vPVViaGG~k~~~~~e~L~~v~~A~~~aGa~Gv~vGRNIfQ 278 (307)
T 3fok_A 213 GNDSSYTWMKLPVVEEM---ERVME-STTMPTLLLGGEGGNDPDATFASWEHALTLPGVRGLTVGRTLLY 278 (307)
T ss_dssp SSCCSSEEEEEECCTTH---HHHGG-GCSSCEEEECCSCC--CHHHHHHHHHHTTSTTEEEEEECTTTSS
T ss_pred CCCcCCCEEEeCCcHHH---HHHHH-hCCCCEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEeechhhcc
Confidence 2 5 7777777 54 55555 3344455555542 11 235677 69999988865444
No 113
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=82.42 E-value=0.73 Score=36.62 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=39.4
Q ss_pred CCCCceEEEec--ccCCCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccc
Q psy11975 357 LAEGDLVWGSV--KGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSL 410 (786)
Q Consensus 357 f~vGDLVWaKv--kG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpF 410 (786)
|++||++-||- -| -|.+|+|.+.....+.+.|+|-+-++ ...|+.++|+|+
T Consensus 2 wk~G~~c~A~~s~Dg-~wYrA~I~~i~~~~~~~~V~fvDYGn--~e~v~~~~lrpi 54 (54)
T 3s6w_A 2 WKPGDECFALYWEDN-KFYRAEVEALHSSGMTAVVKFIDYGN--YEEVLLSNIKPI 54 (54)
T ss_dssp CCTTCEEEEEETTTT-EEEEEEEEEC--CCSEEEEEETTTCC--EEEEEGGGEECC
T ss_pred CCCCCEEEEEECCCC-CEEEEEEEEEeCCCCEEEEEEEccCC--eEEEeHHHEEEC
Confidence 78999999997 34 49999999876555788999988885 455778888773
No 114
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=81.76 E-value=4 Score=46.18 Aligned_cols=131 Identities=13% Similarity=0.068 Sum_probs=83.2
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCcc
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~L 589 (786)
..+|+.|.++++.. .+.++.++.+.++|+|.+.+-... +. .+.+.+..+.|.+.. ++||++-|+ .
T Consensus 241 ~~~rl~V~aavg~~--~d~~era~aLveaGvd~I~Id~a~---g~--~~~v~~~i~~i~~~~~~~~vi~g~v-------~ 306 (511)
T 3usb_A 241 KQGRLLVGAAVGVT--ADAMTRIDALVKASVDAIVLDTAH---GH--SQGVIDKVKEVRAKYPSLNIIAGNV-------A 306 (511)
T ss_dssp TTSCBCCEEEECSS--TTHHHHHHHHHHTTCSEEEEECSC---TT--SHHHHHHHHHHHHHCTTSEEEEEEE-------C
T ss_pred hccceeeeeeeeec--cchHHHHHHHHhhccceEEecccc---cc--hhhhhhHHHHHHHhCCCceEEeeee-------c
Confidence 45677777777654 456788888899999999997542 22 467888888888887 489997664 3
Q ss_pred CHHHHHHHHhCCCEEEEEe-----------------C-CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCccc
Q psy11975 590 SVDTLVKLAHHENIRGVKD-----------------T-DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGG 647 (786)
Q Consensus 590 SpelL~rLAeiPNVVGIKD-----------------S-Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~ 647 (786)
+.+...++.+. .+-+||- . ++..+.++.+....-++.|+. |-- ..+..++++||+|+
T Consensus 307 t~e~a~~~~~a-Gad~i~vg~g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V 385 (511)
T 3usb_A 307 TAEATKALIEA-GANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVV 385 (511)
T ss_dssp SHHHHHHHHHH-TCSEEEECSSCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred cHHHHHHHHHh-CCCEEEECCCCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhh
Confidence 56777776642 2223331 1 233333433211122455554 322 34677899999999
Q ss_pred ccccccccc
Q psy11975 648 INALSAVLG 656 (786)
Q Consensus 648 Isg~aN~~P 656 (786)
+.|..-...
T Consensus 386 ~vGs~~~~~ 394 (511)
T 3usb_A 386 MLGSMFAGV 394 (511)
T ss_dssp EESTTTTTB
T ss_pred eecHHHhcC
Confidence 999865444
No 115
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=81.68 E-value=3.5 Score=44.23 Aligned_cols=104 Identities=7% Similarity=-0.027 Sum_probs=64.4
Q ss_pred ccCCCCeEEEeCC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-C--CCHHHHHHHHHHHHhcCCCCEEEE
Q psy11975 510 EREWQADLLKPQK-------HTTTRATIDLTQKAAKAGANAALILCPYYFQK-K--MTEDLIYEHFISVADNSPIPVIIY 579 (786)
Q Consensus 510 evaGRVPVIaGVG-------a~ST~EAIELAr~Ae~aGADAVmViPPyY~kp-s--~S~eeLv~YFraIAeAtdLPIiLY 579 (786)
+++..+||.+=++ +.+.++++++++.++++|+|++-+....+... . ..+..-.++.+.|.+++++||+.
T Consensus 215 avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~- 293 (349)
T 3hgj_A 215 VVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGA- 293 (349)
T ss_dssp HSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEE-
T ss_pred HhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEE-
Confidence 3444677777443 46789999999999999999999885322110 0 00112356677777777888875
Q ss_pred eCCCCcCCccCHHHHHHHHhCC--CEEEEEeC---CHHHHHHHHh
Q psy11975 580 NNTFVTNIDISVDTLVKLAHHE--NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 580 NiP~~TGv~LSpelL~rLAeiP--NVVGIKDS---Dl~ri~~ll~ 619 (786)
.|.-.+++...++.+.. .+|++=-. |.+-..++.+
T Consensus 294 -----~Ggi~t~e~a~~~l~~G~aD~V~iGR~~lanPdl~~k~~~ 333 (349)
T 3hgj_A 294 -----VGLITTPEQAETLLQAGSADLVLLGRVLLRDPYFPLRAAK 333 (349)
T ss_dssp -----CSSCCCHHHHHHHHHTTSCSEEEESTHHHHCTTHHHHHHH
T ss_pred -----ECCCCCHHHHHHHHHCCCceEEEecHHHHhCchHHHHHHH
Confidence 34335788888776543 44554322 5444444444
No 116
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=81.58 E-value=4.3 Score=42.95 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=69.2
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC----CCCC---CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPY----YFQK---KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPy----Y~kp---s~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
-++.++-.. -.|+.++++|+|++++-.-. +-.+ .++-++++.|-+.|+++++.|+++=|.|. -++.
T Consensus 36 i~~~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pf-gsy~ 108 (281)
T 1oy0_A 36 WAMLTAYDY------STARIFDEAGIPVLLVGDSAANVVYGYDTTVPISIDELIPLVRGVVRGAPHALVVADLPF-GSYE 108 (281)
T ss_dssp EEEEECCSH------HHHHHHHTTTCCEEEECTTHHHHTTCCSSSSSCCGGGTHHHHHHHHHHCTTSEEEEECCT-TSST
T ss_pred EEEEeCcCH------HHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhcCCCCeEEEECCC-Cccc
Confidence 355676663 34677788999999875321 1111 14689999999999999999999999994 3555
Q ss_pred cCHHHH----HHHHhCCCEEEEEeC-C---HHHHHHHHh
Q psy11975 589 ISVDTL----VKLAHHENIRGVKDT-D---NIKLANMAN 619 (786)
Q Consensus 589 LSpelL----~rLAeiPNVVGIKDS-D---l~ri~~ll~ 619 (786)
.+++.. .+|.+--.+.|||.+ . ..+++.+.+
T Consensus 109 ~s~~~a~~na~rl~~eaGa~aVklEdg~e~~~~I~al~~ 147 (281)
T 1oy0_A 109 AGPTAALAAATRFLKDGGAHAVKLEGGERVAEQIACLTA 147 (281)
T ss_dssp TCHHHHHHHHHHHHHTTCCSEEEEEBSGGGHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHhCCeEEEECCcHHHHHHHHHHHH
Confidence 677664 556666789999988 2 566666655
No 117
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=81.54 E-value=1.9 Score=45.61 Aligned_cols=94 Identities=10% Similarity=0.094 Sum_probs=61.4
Q ss_pred CCeEEEeCCCC-CHHHHHHHHHHHHHcCCCEEE--EcCCCCCC-CC--------CCHHHHHHHHHHHHhcCCCCEEE---
Q psy11975 514 QADLLKPQKHT-TTRATIDLTQKAAKAGANAAL--ILCPYYFQ-KK--------MTEDLIYEHFISVADNSPIPVII--- 578 (786)
Q Consensus 514 RVPVIaGVGa~-ST~EAIELAr~Ae~aGADAVm--ViPPyY~k-ps--------~S~eeLv~YFraIAeAtdLPIiL--- 578 (786)
++-||+|..+. +.+.++++|+.++++|++++. +.-.+|.+ |. +.-++-.+.++++++..++|++-
T Consensus 18 ~~~vIAGpc~~~~~e~a~~~a~~lk~~ga~~~~~~v~k~~f~k~prts~~sf~g~~l~~gl~~l~~~~~~~Glp~~te~~ 97 (292)
T 1o60_A 18 PFVLFGGMNVLESRDMAMQVCEAYVKVTEKLGVPYVFKASFDKANRSSIHSYRGPGMEEGLKIFQELKDTFGVKIITDVH 97 (292)
T ss_dssp CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEECC
T ss_pred ceEEEEecCCccCHHHHHHHHHHHHHHhhhhCEeEEEhhhcccCCCCChHHhhhhhHHHHHHHHHHHHHHcCCcEEEecC
Confidence 56789987664 788899999999988765432 11122332 11 11244456678888888998875
Q ss_pred --------------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 --------------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 --------------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|-+|++ .--..+++.++++...-+++|-.
T Consensus 98 d~~~~~~l~~~vd~~kIgA~--~~~n~~Ll~~~a~~~kPV~lk~G 140 (292)
T 1o60_A 98 EIYQCQPVADVVDIIQLPAF--LARQTDLVEAMAKTGAVINVKKP 140 (292)
T ss_dssp SGGGHHHHHTTCSEEEECGG--GTTCHHHHHHHHHTTCEEEEECC
T ss_pred CHHHHHHHHhcCCEEEECcc--cccCHHHHHHHHcCCCcEEEeCC
Confidence 444432 12335688888888888999988
No 118
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=81.31 E-value=21 Score=37.76 Aligned_cols=129 Identities=15% Similarity=0.087 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCH----HHHHHHHHHHHhcCC-------CCEEEEeCCCCcCCccCHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTE----DLIYEHFISVADNSP-------IPVIIYNNTFVTNIDISVDTL 594 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~----eeLv~YFraIAeAtd-------LPIiLYNiP~~TGv~LSpelL 594 (786)
++.+++.++...++|||+|++.-|.-.. +++ +-+..|+++|.++.. +| ++|.+- |. ...+
T Consensus 186 ~~~~~~~~~~~~~aGad~i~i~d~~~~~--lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~-ii~~~~---g~---~~~l 256 (354)
T 3cyv_A 186 AKSVTLYLNAQIKAGAQAVMIFDTWGGV--LTGRDYQQFSLYYMHKIVDGLLRENDGRRVP-VTLFTK---GG---GQWL 256 (354)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECTTGGG--SCHHHHHHHTHHHHHHHHHHSCSEETTEECC-EEEECT---TT---TTTH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccc--CCHHHHHHHhHHHHHHHHHHHHHhcCCCCCC-EEEECC---CH---HHHH
Confidence 5778888999999999999998774322 345 445778888888873 78 444442 22 2355
Q ss_pred HHHHhC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcchhhh------------hhc-cCC-ccccccccccc---
Q psy11975 595 VKLAHH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAGYLLS------------GLL-VGC-AGGINALSAVL--- 655 (786)
Q Consensus 595 ~rLAei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~DelLL~------------aL~-~GA-dG~Isg~aN~~--- 655 (786)
..|++. -.++++-.. |+....+.+ ++++.+..+.|..++. .+. +|. .|+|-..++-.
T Consensus 257 ~~l~~~g~d~i~~d~~~dl~~~~~~~----g~~~~l~Gn~dp~~l~~t~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~ 332 (354)
T 3cyv_A 257 EAMAETGCDALGLDWTTDIADARRRV----GNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQD 332 (354)
T ss_dssp HHHHTTSCSEEECCTTSCHHHHHHHH----TTTSEEECCBCGGGGGSCHHHHHHHHHHHHTTTTTSSCEEBCBSSCCCTT
T ss_pred HHHHhcCCCEEEeCCCCCHHHHHHHh----CCCeEEEecCChHHhCCCHHHHHHHHHHHHHHhCCCCCeEEecCCCCCCC
Confidence 666665 478888434 888776553 3456666665643221 222 254 47777766533
Q ss_pred --cHHHHHHHHHHH
Q psy11975 656 --GGPICELYDLAK 667 (786)
Q Consensus 656 --Pel~vaL~eA~~ 667 (786)
|+-+.+++++++
T Consensus 333 ~p~env~a~v~~v~ 346 (354)
T 3cyv_A 333 VPPEHAGVFVEAVH 346 (354)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 455566666654
No 119
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=80.72 E-value=7.8 Score=39.93 Aligned_cols=129 Identities=13% Similarity=0.064 Sum_probs=72.3
Q ss_pred CCeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEE---cCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCcc
Q psy11975 514 QADLLKPQKH-TTTRATIDLTQKAAKAGANAALI---LCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 514 RVPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmV---iPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~L 589 (786)
|++++.++.. .+.+++++.++.|+++|.+.++. ++-.+.... ..+++++..++... -++.++.+..|.
T Consensus 65 ~~~~~pn~~~~~~~~~~~~f~~~a~~agg~~~i~l~i~~d~~~~~~-e~~~~~~~a~~~~~-~g~~vi~~~~~~------ 136 (264)
T 1xm3_A 65 KYTLLPNTAGASTAEEAVRIARLAKASGLCDMIKVEVIGCSRSLLP-DPVETLKASEQLLE-EGFIVLPYTSDD------ 136 (264)
T ss_dssp GSEEEEECTTCSSHHHHHHHHHHHHHTTCCSSEEECCBCCTTTCCB-CHHHHHHHHHHHHH-TTCCEEEEECSC------
T ss_pred CCeEcCCccccCCHHHHHHHHHHHHHcCCCCeEEEeecCCCccccc-chHHHHHHHHHHHC-CCeEEEEEcCCC------
Confidence 4667666654 78899999999999986655532 221111111 23455554444321 167777676652
Q ss_pred CHHHHHHHHh--CCCEEE------EEeC--CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCcccccccc
Q psy11975 590 SVDTLVKLAH--HENIRG------VKDT--DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 590 SpelL~rLAe--iPNVVG------IKDS--Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~Isg~a 652 (786)
.+.+.++.+ ..-|+. .... +...+.++.+ ...-.+.+-.|-. +.+...+.+|++|++.+.+
T Consensus 137 -~~~a~~~~~~gad~v~~~~~~~Gt~~~~~~~~~l~~i~~-~~~iPviv~gGI~t~eda~~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 137 -VVLARKLEELGVHAIMPGASPIGSGQGILNPLNLSFIIE-QAKVPVIVDAGIGSPKDAAYAMELGADGVLLNTA 209 (264)
T ss_dssp -HHHHHHHHHHTCSCBEECSSSTTCCCCCSCHHHHHHHHH-HCSSCBEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred -HHHHHHHHHhCCCEEEECCcccCCCCCCCCHHHHHHHHh-cCCCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 355555553 233322 1211 4555555544 3333344455553 4577778999999999976
No 120
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=80.67 E-value=18 Score=36.71 Aligned_cols=112 Identities=12% Similarity=0.035 Sum_probs=67.7
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEEE--
Q psy11975 530 IDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRGV-- 606 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVGI-- 606 (786)
++.++.+.++|||.|++..-....|. ..+++++++++ .+++++. +. -+.+...++.+. ..++|+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~~p~-~l~~~i~~~~~----~g~~v~~-~v-------~t~eea~~a~~~Gad~Ig~~~ 157 (232)
T 3igs_A 91 LDDVDALAQAGAAIIAVDGTARQRPV-AVEALLARIHH----HHLLTMA-DC-------SSVDDGLACQRLGADIIGTTM 157 (232)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSS-CHHHHHHHHHH----TTCEEEE-EC-------CSHHHHHHHHHTTCSEEECTT
T ss_pred HHHHHHHHHcCCCEEEECccccCCHH-HHHHHHHHHHH----CCCEEEE-eC-------CCHHHHHHHHhCCCCEEEEcC
Confidence 45566788899999998765433332 35555555554 3676664 22 245666666543 345543
Q ss_pred -------EeC--CHHHHHHHHhhcCCCCEEEE--eCCc--chhhhhhccCCccccccccccccHH
Q psy11975 607 -------KDT--DNIKLANMANQTKDLNFSVF--AGSA--GYLLSGLLVGCAGGINALSAVLGGP 658 (786)
Q Consensus 607 -------KDS--Dl~ri~~ll~~~~~~df~Vf--~G~D--elLL~aL~~GAdG~Isg~aN~~Pel 658 (786)
|.. ++..+.++.+ . ++.|+ .|-. +.+...+.+|++|++-|.+-.-|+.
T Consensus 158 ~g~t~~~~~~~~~~~~i~~l~~-~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsal~~p~~ 218 (232)
T 3igs_A 158 SGYTTPDTPEEPDLPLVKALHD-A---GCRVIAEGRYNSPALAAEAIRYGAWAVTVGSAITRLEH 218 (232)
T ss_dssp TTSSSSSCCSSCCHHHHHHHHH-T---TCCEEEESCCCSHHHHHHHHHTTCSEEEECHHHHCHHH
T ss_pred ccCCCCCCCCCCCHHHHHHHHh-c---CCcEEEECCCCCHHHHHHHHHcCCCEEEEehHhcCHHH
Confidence 222 7787877765 2 33333 3332 3466778899999999976554543
No 121
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=80.44 E-value=3.8 Score=43.33 Aligned_cols=101 Identities=17% Similarity=0.191 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeC--CCCCHHHHHHHHHHHHHcCCCE
Q psy11975 466 SMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQ--KHTTTRATIDLTQKAAKAGANA 543 (786)
Q Consensus 466 sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGV--Ga~ST~EAIELAr~Ae~aGADA 543 (786)
-.+.+|..+-+++ .+++. ..+.+.|++=+ .....+++|+.|+.++++|||+
T Consensus 132 l~~~~e~~~~I~a---a~~a~------------------------~~~~~~i~aRtdaa~~gl~~ai~Ra~ay~eAGAd~ 184 (287)
T 3b8i_A 132 LICVEEGVGKIRA---ALEAR------------------------VDPALTIIARTNAELIDVDAVIQRTLAYQEAGADG 184 (287)
T ss_dssp BCCHHHHHHHHHH---HHHHC------------------------CSTTSEEEEEEETTTSCHHHHHHHHHHHHHTTCSE
T ss_pred ccCHHHHHHHHHH---HHHcC------------------------CCCCcEEEEechhhhcCHHHHHHHHHHHHHcCCCE
Confidence 4678888887877 43321 12445566533 2345799999999999999999
Q ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 544 ALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 544 VmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|++-.+ ++ .+ -+++|+++.++|+++- +......++.+.|.+| +|.-+-+.
T Consensus 185 i~~e~~----~~--~~----~~~~i~~~~~~P~ii~--~~g~~~~~~~~eL~~l----Gv~~v~~~ 234 (287)
T 3b8i_A 185 ICLVGV----RD--FA----HLEAIAEHLHIPLMLV--TYGNPQLRDDARLARL----GVRVVVNG 234 (287)
T ss_dssp EEEECC----CS--HH----HHHHHHTTCCSCEEEE--CTTCGGGCCHHHHHHT----TEEEEECC
T ss_pred EEecCC----CC--HH----HHHHHHHhCCCCEEEe--CCCCCCCCCHHHHHHc----CCcEEEEC
Confidence 998753 33 33 3466778888999942 2111124677766666 45555555
No 122
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=79.83 E-value=20 Score=36.23 Aligned_cols=114 Identities=11% Similarity=0.085 Sum_probs=68.0
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEEE--
Q psy11975 530 IDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRGV-- 606 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVGI-- 606 (786)
.+.++.+.++|||.|++..-.-..|. ..+++++++++ .+++++. +. -+.+...++.+. ..++|+
T Consensus 91 ~~~i~~~~~aGad~I~l~~~~~~~p~-~l~~~i~~~~~----~g~~v~~-~v-------~t~eea~~a~~~Gad~Ig~~~ 157 (229)
T 3q58_A 91 LQDVDALAQAGADIIAFDASFRSRPV-DIDSLLTRIRL----HGLLAMA-DC-------STVNEGISCHQKGIEFIGTTL 157 (229)
T ss_dssp HHHHHHHHHHTCSEEEEECCSSCCSS-CHHHHHHHHHH----TTCEEEE-EC-------SSHHHHHHHHHTTCSEEECTT
T ss_pred HHHHHHHHHcCCCEEEECccccCChH-HHHHHHHHHHH----CCCEEEE-ec-------CCHHHHHHHHhCCCCEEEecC
Confidence 45566778899999988765432332 34555555554 3677665 21 246666666543 345543
Q ss_pred -------E-eC-CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCccccccccccccHHHH
Q psy11975 607 -------K-DT-DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGGINALSAVLGGPIC 660 (786)
Q Consensus 607 -------K-DS-Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~Isg~aN~~Pel~v 660 (786)
| .. |+..+.++.+ . ++.|+. |-. +.+..++.+|++|++.|.+-.-|+...
T Consensus 158 ~g~t~~~~~~~~~~~li~~l~~-~---~ipvIA~GGI~t~~d~~~~~~~GadgV~VGsai~~p~~~~ 220 (229)
T 3q58_A 158 SGYTGPITPVEPDLAMVTQLSH-A---GCRVIAEGRYNTPALAANAIEHGAWAVTVGSAITRIEHIC 220 (229)
T ss_dssp TTSSSSCCCSSCCHHHHHHHHT-T---TCCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHCHHHHH
T ss_pred ccCCCCCcCCCCCHHHHHHHHH-c---CCCEEEECCCCCHHHHHHHHHcCCCEEEEchHhcChHHHH
Confidence 2 22 7777777765 2 344333 332 346677889999999997755554443
No 123
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=79.58 E-value=19 Score=38.16 Aligned_cols=131 Identities=13% Similarity=0.073 Sum_probs=75.7
Q ss_pred CCeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEcC--CC-CCCCCCCHH---HHHHHHHHHHhcCCCCEEEEeCCCCcC
Q psy11975 514 QADLLKPQK-HTTTRATIDLTQKAAKAGANAALILC--PY-YFQKKMTED---LIYEHFISVADNSPIPVIIYNNTFVTN 586 (786)
Q Consensus 514 RVPVIaGVG-a~ST~EAIELAr~Ae~aGADAVmViP--Py-Y~kps~S~e---eLv~YFraIAeAtdLPIiLYNiP~~TG 586 (786)
..||++.++ +.+.++.. +.++.+|+|++-+-. |. +..+. .+. .+.+..++|.+++++||++=-. |
T Consensus 116 ~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~~~~~~~-~~~~~~~~~~~i~~vr~~~~~Pv~vK~~----~ 187 (349)
T 1p0k_A 116 NGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQEIVMPE-GDRSFSGALKRIEQICSRVSVPVIVKEV----G 187 (349)
T ss_dssp SSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTTTC---------CTTHHHHHHHHHHHCSSCEEEEEE----S
T ss_pred CceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchhhhcCCC-CCcchHHHHHHHHHHHHHcCCCEEEEec----C
Confidence 568998887 45665533 456678999985532 21 11211 111 2677888888888999998653 2
Q ss_pred CccCHHHHHHHHh--CCCEEEE-------------E---------eC---CHHHHHHHHhhcCCCCEEEEeCCc----ch
Q psy11975 587 IDISVDTLVKLAH--HENIRGV-------------K---------DT---DNIKLANMANQTKDLNFSVFAGSA----GY 635 (786)
Q Consensus 587 v~LSpelL~rLAe--iPNVVGI-------------K---------DS---Dl~ri~~ll~~~~~~df~Vf~G~D----el 635 (786)
..++++...++.+ ...|+-. + +. +...+.++.+. . +++.|+...+ +.
T Consensus 188 ~~~~~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~-~-~~ipvia~GGI~~~~d 265 (349)
T 1p0k_A 188 FGMSKASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSE-F-PASTMIASGGLQDALD 265 (349)
T ss_dssp SCCCHHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHH-C-TTSEEEEESSCCSHHH
T ss_pred CCCCHHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHh-c-CCCeEEEECCCCCHHH
Confidence 3356777777663 3433321 3 11 33445555442 2 3555554332 24
Q ss_pred hhhhhccCCcccccccccc
Q psy11975 636 LLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 636 LL~aL~~GAdG~Isg~aN~ 654 (786)
...++.+||++++.|.+.+
T Consensus 266 ~~k~l~~GAd~V~iG~~~l 284 (349)
T 1p0k_A 266 VAKAIALGASCTGMAGHFL 284 (349)
T ss_dssp HHHHHHTTCSEEEECHHHH
T ss_pred HHHHHHcCCCEEEEcHHHH
Confidence 6677889999999987533
No 124
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=79.48 E-value=8.9 Score=40.35 Aligned_cols=129 Identities=16% Similarity=0.104 Sum_probs=80.6
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHH----HHHHHHHHHhcC----CCCEEEEeCCCCcCCccCHHHHHH
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDL----IYEHFISVADNS----PIPVIIYNNTFVTNIDISVDTLVK 596 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~ee----Lv~YFraIAeAt----dLPIiLYNiP~~TGv~LSpelL~r 596 (786)
-++..++.++...++|||+|++.-+.-.. ++++. +..|+++|.++. ++|++++- .|. ...+..
T Consensus 177 i~~~~~~~~~~~~~aGad~i~i~d~~~~~--lsp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~----~g~---~~~l~~ 247 (338)
T 2eja_A 177 LTETVLAYLKEQIKAGADVVQIFDSWVNN--LSLEDYGEYVYPYVNYLISELKDFSDTPVIYFF----RGS---SSFIDL 247 (338)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEETTGGG--SCHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEE----SSH---HHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEecCcccc--CCHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEc----CCc---HHHHHH
Confidence 35778889999999999999988775322 23443 456777777766 68977763 232 456777
Q ss_pred HHhC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcchhh------------hhhc-cCC-ccccccccc-----cc
Q psy11975 597 LAHH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAGYLL------------SGLL-VGC-AGGINALSA-----VL 655 (786)
Q Consensus 597 LAei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~DelLL------------~aL~-~GA-dG~Isg~aN-----~~ 655 (786)
|++. -.++++-.. |+....+.+ +..+..+.|..++ ..+. +|. .|+|-+.++ .-
T Consensus 248 l~~~g~d~~~~d~~~dl~~~~~~~------~~~l~Gn~dp~~l~gt~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p 321 (338)
T 2eja_A 248 AVDYRADALSVDWSVDIPELFKIY------DKGFQGNLEPAVLYASEEVIEEKTLGLLRRIPVKTRYVFNLGHGLAPDME 321 (338)
T ss_dssp HTTSCCSEEECCTTSCHHHHHHHC------CSEEECCBCGGGGGSCHHHHHHHHHHHHTTCCCSSSEEBCBSSCCCTTSC
T ss_pred HHHcCCCEEEeCCCCCHHHHHHhC------CeEEEECCCHHHhcCCHHHHHHHHHHHHHHhCCCCCeEEeCCCCCCCCCC
Confidence 7764 358888444 888766543 3444444443222 1222 354 578877665 33
Q ss_pred cHHHHHHHHHHHc
Q psy11975 656 GGPICELYDLAKA 668 (786)
Q Consensus 656 Pel~vaL~eA~~a 668 (786)
|+-+.++++++++
T Consensus 322 ~en~~a~v~~v~~ 334 (338)
T 2eja_A 322 LEKVKYLVDLVKS 334 (338)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 4667777777653
No 125
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=79.48 E-value=4.7 Score=42.87 Aligned_cols=73 Identities=18% Similarity=0.138 Sum_probs=46.7
Q ss_pred CCeEEEeCCC---CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCcc
Q psy11975 514 QADLLKPQKH---TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDI 589 (786)
Q Consensus 514 RVPVIaGVGa---~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~L 589 (786)
.+-|++=+-+ ..++++|+.++.++++|||+|.+-.+ .+ .+++.++.+++ ++|+++ |. .......+
T Consensus 155 ~~~I~ARTDa~~~~gldeai~Ra~ay~~AGAD~if~~~~----~~--~ee~~~~~~~~----~~Pl~~-n~~~~g~tp~~ 223 (298)
T 3eoo_A 155 TFVIMARTDAAAAEGIDAAIERAIAYVEAGADMIFPEAM----KT--LDDYRRFKEAV----KVPILA-NLTEFGSTPLF 223 (298)
T ss_dssp TSEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEECCC----CS--HHHHHHHHHHH----CSCBEE-ECCTTSSSCCC
T ss_pred CeEEEEeehhhhhcCHHHHHHHHHhhHhcCCCEEEeCCC----CC--HHHHHHHHHHc----CCCeEE-EeccCCCCCCC
Confidence 4555554433 35789999999999999999998764 23 67766655554 588865 32 11111235
Q ss_pred CHHHHHHH
Q psy11975 590 SVDTLVKL 597 (786)
Q Consensus 590 SpelL~rL 597 (786)
+.+.|.+|
T Consensus 224 ~~~eL~~l 231 (298)
T 3eoo_A 224 TLDELKGA 231 (298)
T ss_dssp CHHHHHHT
T ss_pred CHHHHHHc
Confidence 66666665
No 126
>1ydx_A Type I restriction enzyme specificity protein Mg4; type-I HSDS, DNA binding protein; 2.30A {Mycoplasma genitalium} SCOP: d.287.1.2 d.287.1.2
Probab=79.44 E-value=0.38 Score=51.30 Aligned_cols=14 Identities=0% Similarity=0.021 Sum_probs=10.7
Q ss_pred CCC-CHHHHHHHHHh
Q psy11975 465 TSM-PIQKRKSLLRK 478 (786)
Q Consensus 465 ~sL-T~dER~~Lle~ 478 (786)
.-. +.+|++++++.
T Consensus 161 ~lP~~l~eQ~~I~~~ 175 (406)
T 1ydx_A 161 PFTSNKNEQHAIANT 175 (406)
T ss_dssp EECCCHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHH
Confidence 344 68899999887
No 127
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=79.27 E-value=4.4 Score=42.92 Aligned_cols=81 Identities=19% Similarity=0.221 Sum_probs=53.4
Q ss_pred CCCeEEEeCCC----CCHHHHHHHHHHHHHcCCCEEEEcC-CCCCCCCCCHHHHHHHHHHHHhcCC--CCEEEEeCCCCc
Q psy11975 513 WQADLLKPQKH----TTTRATIDLTQKAAKAGANAALILC-PYYFQKKMTEDLIYEHFISVADNSP--IPVIIYNNTFVT 585 (786)
Q Consensus 513 GRVPVIaGVGa----~ST~EAIELAr~Ae~aGADAVmViP-PyY~kps~S~eeLv~YFraIAeAtd--LPIiLYNiP~~T 585 (786)
+...|++=+-+ ...+++|+.|+.++++|||+|++-. + ++ .+++ ++|+++.+ +|+++ |.- .
T Consensus 148 ~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~----~~--~~~~----~~i~~~~~~~vP~i~-n~~--~ 214 (290)
T 2hjp_A 148 RDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILIHSRQ----KT--PDEI----LAFVKSWPGKVPLVL-VPT--A 214 (290)
T ss_dssp TTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCC----SS--SHHH----HHHHHHCCCSSCEEE-CGG--G
T ss_pred CCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEeCCCC----CC--HHHH----HHHHHHcCCCCCEEE-ecc--C
Confidence 44556664332 3489999999999999999999865 3 22 3444 55666666 99887 532 2
Q ss_pred CCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 586 NIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 586 Gv~LSpelL~rLAeiPNVVGIKDS 609 (786)
+..++. .+|+++.+|.-+-+.
T Consensus 215 ~~~~~~---~eL~~lG~v~~v~~~ 235 (290)
T 2hjp_A 215 YPQLTE---ADIAALSKVGIVIYG 235 (290)
T ss_dssp CTTSCH---HHHHTCTTEEEEEEC
T ss_pred CCCCCH---HHHHhcCCeeEEEec
Confidence 334554 555555557777776
No 128
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=79.21 E-value=3.5 Score=42.09 Aligned_cols=134 Identities=18% Similarity=0.130 Sum_probs=80.4
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCC------CEEEEeCCCCcCCccC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPI------PVIIYNNTFVTNIDIS 590 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdL------PIiLYNiP~~TGv~LS 590 (786)
+++|+|.-- +.+.++.|.++||+.++. |.+ ..+++++.++. ++ |++ | |+ .+
T Consensus 65 ~~IGAGTVl---t~~~a~~ai~AGA~fivs--P~~------~~evi~~~~~~----~v~~~~~~~~~----P---G~-~T 121 (217)
T 3lab_A 65 AIVGAGTVC---TADDFQKAIDAGAQFIVS--PGL------TPELIEKAKQV----KLDGQWQGVFL----P---GV-AT 121 (217)
T ss_dssp SEEEEECCC---SHHHHHHHHHHTCSEEEE--SSC------CHHHHHHHHHH----HHHCSCCCEEE----E---EE-CS
T ss_pred CeEeecccc---CHHHHHHHHHcCCCEEEe--CCC------cHHHHHHHHHc----CCCccCCCeEe----C---CC-CC
Confidence 455666543 477788999999998865 332 45677777663 23 443 2 44 56
Q ss_pred HHHHHHHHhCCCEEEEEeC--C----HHHHHHHHhhcCCCCEEE--EeCCc-chhhhhhccCCccccccccccccHHHHH
Q psy11975 591 VDTLVKLAHHENIRGVKDT--D----NIKLANMANQTKDLNFSV--FAGSA-GYLLSGLLVGCAGGINALSAVLGGPICE 661 (786)
Q Consensus 591 pelL~rLAeiPNVVGIKDS--D----l~ri~~ll~~~~~~df~V--f~G~D-elLL~aL~~GAdG~Isg~aN~~Pel~va 661 (786)
+..+.+..+. ..-.||.- . +..+.++.. .-+++.+ -.|-+ +.+-+.+.+|+..+++| +.+.|..
T Consensus 122 ptE~~~A~~~-Gad~vK~FPa~~~gG~~~lkal~~--p~p~i~~~ptGGI~~~N~~~~l~aGa~~~vgG-s~l~~~~--- 194 (217)
T 3lab_A 122 ASEVMIAAQA-GITQLKCFPASAIGGAKLLKAWSG--PFPDIQFCPTGGISKDNYKEYLGLPNVICAGG-SWLTESK--- 194 (217)
T ss_dssp HHHHHHHHHT-TCCEEEETTTTTTTHHHHHHHHHT--TCTTCEEEEBSSCCTTTHHHHHHSTTBCCEEE-SGGGCHH---
T ss_pred HHHHHHHHHc-CCCEEEECccccccCHHHHHHHHh--hhcCceEEEeCCCCHHHHHHHHHCCCEEEEEC-hhhcChh---
Confidence 7776665544 23344766 2 355555543 2244443 33444 34677788998776665 4566643
Q ss_pred HHHHHHcCCHHHHHHHHHHhhh
Q psy11975 662 LYDLAKAGKWEEAMKLQHRLVK 683 (786)
Q Consensus 662 L~eA~~aGD~eeAreLQ~rL~p 683 (786)
++++||+++..++-+++..
T Consensus 195 ---~i~~~~~~~i~~~a~~~~~ 213 (217)
T 3lab_A 195 ---LLIEGDWNEVTRRASEIVK 213 (217)
T ss_dssp ---HHHHTCHHHHHHHHHHSCC
T ss_pred ---HHhcCCHHHHHHHHHHHHh
Confidence 3467999877766655443
No 129
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=79.08 E-value=0.48 Score=51.75 Aligned_cols=68 Identities=15% Similarity=0.118 Sum_probs=39.3
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHc----CCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKA----GANAALILCPYYF-QKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~a----GADAVmViPPyY~-kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
.|++-++=-++. .....-++..+...+ ++.||++--+.-+ ... ....+.+-++++....++|| +||.|
T Consensus 263 ~g~ILfLEdv~E-~py~idRmL~qL~~aG~f~~~~GIilG~f~~~~~~~-~~~~~~~vl~~~~~~~~iPV-v~~~~ 335 (371)
T 3tla_A 263 NGDILFIEDSRK-SIATVERLFSMLKLNRVFDKVSAIILGKHELFDCAG-SKRRPYEVLTEVLDGKQIPV-LDGFD 335 (371)
T ss_dssp TTCEEEEECBSC-BHHHHHHHHHHHHHTTGGGTCSEEEEECCBTCBCTT-SCCCHHHHHHHHHTTCCCCE-EEEES
T ss_pred CCeEEEEEeCCC-CHHHHHHHHHHHHHcCCcccCCEEEEcCCccccCCC-ccccHHHHHHHHHhhCCCcE-EECCC
Confidence 344444445555 355555555566655 5899999875422 111 12235666666666678996 45655
No 130
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=79.01 E-value=12 Score=38.72 Aligned_cols=120 Identities=11% Similarity=0.074 Sum_probs=76.7
Q ss_pred CCCeEEEeCCCCCH--------HHHHHHHHHHHHcCCCEEEEc-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 513 WQADLLKPQKHTTT--------RATIDLTQKAAKAGANAALIL-CPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 513 GRVPVIaGVGa~ST--------~EAIELAr~Ae~aGADAVmVi-PPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
|+..||+-+-..|. .+..++|+.+++. |.++.++ -|.||..+ .+|.++|.+++++||+--|+
T Consensus 39 ~~~~vIaE~K~aSPSkG~i~~~~~~~~iA~~y~~~-A~~IsVlTd~~~F~gs------~~dL~~ir~~v~lPvLrKDf-- 109 (251)
T 1i4n_A 39 ERVKIIAEFKKASPSAGDINADASLEDFIRMYDEL-ADAISILTEKHYFKGD------PAFVRAARNLTCRPILAKDF-- 109 (251)
T ss_dssp SSCEEEEEECSBCSSSCBSCTTCCHHHHHHHHHHH-CSEEEEECCCSSSCCC------THHHHHHHTTCCSCEEEECC--
T ss_pred CCceEEEeecCCCCCCCccCCCCCHHHHHHHHHHh-CCceEEEecccccCCC------HHHHHHHHHhCCCCEEEeeC--
Confidence 34567775543221 2778999999998 9999885 57788776 58888999999999997773
Q ss_pred CcCCccCHHHHHHHHhC-CCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeC-Cc-chhhhhhcc-CCc
Q psy11975 584 VTNIDISVDTLVKLAHH-ENIRGVKDT--DNIKLANMANQTKDLNFSVFAG-SA-GYLLSGLLV-GCA 645 (786)
Q Consensus 584 ~TGv~LSpelL~rLAei-PNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G-~D-elLL~aL~~-GAd 645 (786)
-+++-.+.++... -.++-+--+ +...+.++++....-+..++.- ++ +-+..++.+ |++
T Consensus 110 ----i~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~g~~ 173 (251)
T 1i4n_A 110 ----YIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELGMDSLVEVHSREDLEKVFSVIRPK 173 (251)
T ss_dssp ----CCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTTCEEEEEECSHHHHHHHHTTCCCS
T ss_pred ----CCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCCC
Confidence 2444456665444 356666666 5555655544222224443332 23 235566777 876
No 131
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=78.96 E-value=5 Score=41.90 Aligned_cols=55 Identities=18% Similarity=0.221 Sum_probs=42.1
Q ss_pred CCCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCC--------CCHHHHHHHHH
Q psy11975 463 SSTSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKH--------TTTRATIDLTQ 534 (786)
Q Consensus 463 E~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa--------~ST~EAIELAr 534 (786)
-+..|+.++|.++++. ..+ ..+.|+.-+|. .+..+-|++++
T Consensus 107 G~i~l~~~~~~~~I~~---~~~----------------------------~G~~v~~EvG~k~~~~~~~~~~~~~I~~~~ 155 (251)
T 1qwg_A 107 GSSDISLEERNNAIKR---AKD----------------------------NGFMVLTEVGKKMPDKDKQLTIDDRIKLIN 155 (251)
T ss_dssp SSSCCCHHHHHHHHHH---HHH----------------------------TTCEEEEEECCSSHHHHTTCCHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHH---HHH----------------------------CCCEEeeeccccCCcccCCCCHHHHHHHHH
Confidence 3578999999999998 322 12344554443 46699999999
Q ss_pred HHHHcCCCEEEEcC
Q psy11975 535 KAAKAGANAALILC 548 (786)
Q Consensus 535 ~Ae~aGADAVmViP 548 (786)
...++||+.||+=.
T Consensus 156 ~~LeAGA~~ViiEa 169 (251)
T 1qwg_A 156 FDLDAGADYVIIEG 169 (251)
T ss_dssp HHHHHTCSEEEECC
T ss_pred HHHHCCCcEEEEee
Confidence 99999999999986
No 132
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=78.71 E-value=10 Score=39.58 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=67.0
Q ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC----CC------------CCHHHHHHHHHHHHhc-CCCCEEE--
Q psy11975 518 LKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQ----KK------------MTEDLIYEHFISVADN-SPIPVII-- 578 (786)
Q Consensus 518 IaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~k----ps------------~S~eeLv~YFraIAeA-tdLPIiL-- 578 (786)
++-.|..+.+.+++.++..++.|||.+-+--||-.. |. ++-+.+++..+++-+. .++||++
T Consensus 25 yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~ 104 (271)
T 3nav_A 25 FVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLM 104 (271)
T ss_dssp EEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 447789999999999999999999999999997321 11 1233556666777665 6899976
Q ss_pred EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 579 YNNTFVTNIDISVDTLVKLAHHENIRGVKDT-----DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 579 YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-----Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
|-+|.. .+..+.+.+-+.--.+-|+--. ....+.+..++ .+-++..+...
T Consensus 105 Y~n~v~---~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~-~gl~~I~lvap 159 (271)
T 3nav_A 105 YANLVY---ARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEK-FGIQPIFIAPP 159 (271)
T ss_dssp CHHHHH---HTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHH-TTCEEEEEECT
T ss_pred cCcHHH---HHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH-cCCeEEEEECC
Confidence 777742 1234544444422234443333 23444444442 33344434443
No 133
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=78.70 E-value=6.9 Score=38.50 Aligned_cols=109 Identities=12% Similarity=0.080 Sum_probs=65.4
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC------HHHHHHHHhCCC
Q psy11975 529 TIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS------VDTLVKLAHHEN 602 (786)
Q Consensus 529 AIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS------pelL~rLAeiPN 602 (786)
..+.++.+.++|||.+-+.+ + .+ .+ .++.++ +.. -+.=+|..+-..+. .+.+.+++..|.
T Consensus 67 ~~~~v~~~~~~Gad~vtvh~--~--~g--~~-~i~~~~---~~~----gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G 132 (208)
T 2czd_A 67 NRLIARKVFGAGADYVIVHT--F--VG--RD-SVMAVK---ELG----EIIMVVEMSHPGALEFINPLTDRFIEVANEIE 132 (208)
T ss_dssp HHHHHHHHHHTTCSEEEEES--T--TC--HH-HHHHHH---TTS----EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHC
T ss_pred HHHHHHHHHhcCCCEEEEec--c--CC--HH-HHHHHH---HhC----CcEEEEecCCcchhhHHHHHHHHHHHHHHHhC
Confidence 34567788899999998875 2 12 33 344333 332 33333443222211 234555566688
Q ss_pred EEEEEeC--CHHHHHHHHhhcCCCCEEEEeCC-cc---hhhhhhccCCcccccccc
Q psy11975 603 IRGVKDT--DNIKLANMANQTKDLNFSVFAGS-AG---YLLSGLLVGCAGGINALS 652 (786)
Q Consensus 603 VVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G~-De---lLL~aL~~GAdG~Isg~a 652 (786)
+.|+|.. .++++.++.+ ..+.++.++.|. .. ....++.+|+++++.|.+
T Consensus 133 ~~G~~~~~~~~~~i~~lr~-~~~~~~~iv~gGI~~~g~~~~~~~~aGad~vvvGr~ 187 (208)
T 2czd_A 133 PFGVIAPGTRPERIGYIRD-RLKEGIKILAPGIGAQGGKAKDAVKAGADYIIVGRA 187 (208)
T ss_dssp CSEEECCCSSTHHHHHHHH-HSCTTCEEEECCCCSSTTHHHHHHHHTCSEEEECHH
T ss_pred CcEEEECCCChHHHHHHHH-hCCCCeEEEECCCCCCCCCHHHHHHcCCCEEEEChH
Confidence 9999999 5667766655 345456556554 32 355778899999988754
No 134
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=78.67 E-value=23 Score=34.21 Aligned_cols=125 Identities=14% Similarity=0.022 Sum_probs=68.1
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE-eCCCCcCCccCHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIY-NNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLY-NiP~~TGv~LSpe 592 (786)
++||.++.--....+ ..++.|.++|||++++..- +. ++.+.+..+.+ +..++++++- ..|. -+.+
T Consensus 53 ~~~i~~~~~~~~~~~--~~~~~~~~~Gad~v~v~~~----~~--~~~~~~~~~~~-~~~g~~~~v~~~~~~-----t~~~ 118 (211)
T 3f4w_A 53 HKEVLADAKIMDGGH--FESQLLFDAGADYVTVLGV----TD--VLTIQSCIRAA-KEAGKQVVVDMICVD-----DLPA 118 (211)
T ss_dssp TSEEEEEEEECSCHH--HHHHHHHHTTCSEEEEETT----SC--HHHHHHHHHHH-HHHTCEEEEECTTCS-----SHHH
T ss_pred CCEEEEEEEeccchH--HHHHHHHhcCCCEEEEeCC----CC--hhHHHHHHHHH-HHcCCeEEEEecCCC-----CHHH
Confidence 467877654433222 2488889999999999531 22 34444444443 3447777752 2231 1134
Q ss_pred HHHHHHhC-CCEEEEEeC---------CHHHHHHHHhhcCCCCEEEEeCCc-chhhhhhccCCcccccccc
Q psy11975 593 TLVKLAHH-ENIRGVKDT---------DNIKLANMANQTKDLNFSVFAGSA-GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 593 lL~rLAei-PNVVGIKDS---------Dl~ri~~ll~~~~~~df~Vf~G~D-elLL~aL~~GAdG~Isg~a 652 (786)
.+.++.+. ..++++-.. ++..+.++.+....-.+.+-.|-. +.+...+..|++|++.|.+
T Consensus 119 ~~~~~~~~g~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~~~~~~~~~Gad~vvvGsa 189 (211)
T 3f4w_A 119 RVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQTVKDYALLGPDVVIVGSA 189 (211)
T ss_dssp HHHHHHHHTCCEEEEECCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTTTHHHHHTTCCSEEEECHH
T ss_pred HHHHHHHcCCCEEEEcCCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHHHHHHHHHcCCCEEEECHH
Confidence 55555543 345565321 345566555421122233333433 3455677899999999975
No 135
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=78.21 E-value=5.6 Score=40.10 Aligned_cols=132 Identities=13% Similarity=0.098 Sum_probs=64.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCC--C-CE-EEEeCC---C--
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSP--I-PV-IIYNNT---F-- 583 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtd--L-PI-iLYNiP---~-- 583 (786)
.+|||++-+-.+.++ ++.+.++|||+|++....+.. .. .+.+ +++++..+ . .+ +--+.+ +
T Consensus 74 ~iPvi~~ggi~~~~~----i~~~~~~Gad~v~lg~~~~~~~~~--~~~~----~~~~~~~g~~~~~i~~~~d~~~~~g~~ 143 (266)
T 2w6r_A 74 TLPIIASGGAGKMEH----FLEAFLAGADKALAASVFHFREID--MREL----KEYLKKHGGSGQAVVVAIDAKRVDGEF 143 (266)
T ss_dssp CSCEEEESCCCSTHH----HHHHHHHTCSEEECCCCC--------CHHH----HHHCC----CCCEEEEEEEEEEETTEE
T ss_pred CCCEEEECCCCCHHH----HHHHHHcCCcHhhhhHHHHhCCCC--HHHH----HHHHHHcCCCCCEEEEEEEEEecCCCE
Confidence 579999766555454 344456799999998876632 11 2333 33433332 1 11 111111 0
Q ss_pred ----CcC---CccCHHH-HHHHHhC-CCEEEEEe--------C-CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccC
Q psy11975 584 ----VTN---IDISVDT-LVKLAHH-ENIRGVKD--------T-DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVG 643 (786)
Q Consensus 584 ----~TG---v~LSpel-L~rLAei-PNVVGIKD--------S-Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~G 643 (786)
..+ ...++.. +.++.+. ...+++=. . |+..+.++.+. ..-.+-.-.|-. +.+...+..|
T Consensus 144 ~v~~~g~~~~~~~~~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~-~~ipvia~GGI~~~ed~~~~~~~G 222 (266)
T 2w6r_A 144 MVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL-TTLPIIASGGAGKMEHFLEAFLAG 222 (266)
T ss_dssp EEEETTTTEEEEEEHHHHHHHHHHTTCSEEEEEETTTTTTCSCCCHHHHHHHGGG-CCSCEEEESCCCSHHHHHHHHHHT
T ss_pred EEEECCCceecchhHHHHHHHHHHcCCCEEEEEeecCCCCcCCCCHHHHHHHHHH-cCCCEEEeCCCCCHHHHHHHHHcC
Confidence 001 1134444 4555443 34444411 1 67777777652 222333333333 3355666789
Q ss_pred Ccccccccccccc
Q psy11975 644 CAGGINALSAVLG 656 (786)
Q Consensus 644 AdG~Isg~aN~~P 656 (786)
++|++.+.+-+..
T Consensus 223 adgv~vgsal~~~ 235 (266)
T 2w6r_A 223 ADAALAASVFHFR 235 (266)
T ss_dssp CSEEEESTTTC--
T ss_pred CHHHHccHHHHcC
Confidence 9999999875533
No 136
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=78.16 E-value=11 Score=39.63 Aligned_cols=95 Identities=19% Similarity=0.079 Sum_probs=66.0
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC----CCC---CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYY----FQK---KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY----~kp---s~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
-++.++-.. -.|+.++++|+|++++-.-.- -.+ .++-++++.|.++|+++++.+.++=|+|. -++
T Consensus 31 i~m~tayDa------~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pf-gsY- 102 (275)
T 3vav_A 31 IAMLTCYDA------SFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPF-GTY- 102 (275)
T ss_dssp EEEEECCSH------HHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCT-TSC-
T ss_pred EEEEeCcCH------HHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCC-CCC-
Confidence 355666653 346778899999998764321 111 24799999999999999987777789994 235
Q ss_pred cCHHHH----HHHHhCCCEEEEEeC-C---HHHHHHHHh
Q psy11975 589 ISVDTL----VKLAHHENIRGVKDT-D---NIKLANMAN 619 (786)
Q Consensus 589 LSpelL----~rLAeiPNVVGIKDS-D---l~ri~~ll~ 619 (786)
-+++.. .+|.+. .+.|||.+ . .+.++++.+
T Consensus 103 ~s~~~a~~~a~rl~ka-Ga~aVklEdg~~~~~~i~~l~~ 140 (275)
T 3vav_A 103 GTPADAFASAVKLMRA-GAQMVKFEGGEWLAETVRFLVE 140 (275)
T ss_dssp SSHHHHHHHHHHHHHT-TCSEEEEECCGGGHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHc-CCCEEEECCchhHHHHHHHHHH
Confidence 566654 455565 89999998 2 455666654
No 137
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=78.01 E-value=10 Score=40.54 Aligned_cols=139 Identities=9% Similarity=-0.017 Sum_probs=83.9
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC-C----CCCCCC---CCHHHHHHHHHHHHhcCC--CCEEEEeCCCCcC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILC-P----YYFQKK---MTEDLIYEHFISVADNSP--IPVIIYNNTFVTN 586 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViP-P----yY~kps---~S~eeLv~YFraIAeAtd--LPIiLYNiP~~TG 586 (786)
++.++-... -|+.++++|+|++.+.- - .+-.|+ ++-++++.+.+.|++.++ +| ++-|.|.-+|
T Consensus 28 ~~~~a~D~~------sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~P-viaD~d~Gyg 100 (307)
T 3lye_A 28 VCPGVYDGL------SARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPP-LIADMDTGYG 100 (307)
T ss_dssp EEEEECSHH------HHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCC-EEEECTTCSS
T ss_pred EEecCcCHH------HHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCc-EEEECCCCCC
Confidence 466777632 35667778999999842 1 112222 468999999999999876 89 6788885444
Q ss_pred CccCHHHH----HHHHhCCCEEEEEeC--C---------------H----HHHHHHHhhc--CCCCEEEEeCCcchhh--
Q psy11975 587 IDISVDTL----VKLAHHENIRGVKDT--D---------------N----IKLANMANQT--KDLNFSVFAGSAGYLL-- 637 (786)
Q Consensus 587 v~LSpelL----~rLAeiPNVVGIKDS--D---------------l----~ri~~ll~~~--~~~df~Vf~G~DelLL-- 637 (786)
+++.+ .+|.+ -.+.|||.+ . . .++...+... .+++|.|..=.|.+..
T Consensus 101 ---~~~~v~~~v~~l~~-aGaagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~g 176 (307)
T 3lye_A 101 ---GPIMVARTVEHYIR-SGVAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLG 176 (307)
T ss_dssp ---SHHHHHHHHHHHHH-TTCCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHC
T ss_pred ---CHHHHHHHHHHHHH-cCCeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccC
Confidence 34433 33333 478899888 1 1 2333333221 2567776655554322
Q ss_pred --h-------hhccCCccccccccccccHHHHHHHHHHH
Q psy11975 638 --S-------GLLVGCAGGINALSAVLGGPICELYDLAK 667 (786)
Q Consensus 638 --~-------aL~~GAdG~Isg~aN~~Pel~vaL~eA~~ 667 (786)
+ ...+|+|+++.-. ---++.+.++.+++.
T Consensus 177 ldeAi~Ra~ay~eAGAD~ifi~~-~~~~~~~~~i~~~~~ 214 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGLLEG-FRSKEQAAAAVAALA 214 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECC-CSCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCCEEEecC-CCCHHHHHHHHHHcc
Confidence 1 2458888876542 123467777777663
No 138
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=77.89 E-value=11 Score=39.34 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=76.1
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDT 593 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpel 593 (786)
.+||+-==.=.+.. +...|..+|||+|+++.-. . +++++.+++ +.|...++.+++-- =+.+.
T Consensus 104 ~lPvLrKDFiid~y----QI~eAr~~GADaILLI~a~---L--~~~~l~~l~-~~A~~lGl~~LvEV--------h~~~E 165 (258)
T 4a29_A 104 SIPILMSDFIVKES----QIDDAYNLGADTVLLIVKI---L--TERELESLL-EYARSYGMEPLILI--------NDEND 165 (258)
T ss_dssp SSCEEEESCCCSHH----HHHHHHHHTCSEEEEEGGG---S--CHHHHHHHH-HHHHHTTCCCEEEE--------SSHHH
T ss_pred CCCEeeccccccHH----HHHHHHHcCCCeeehHHhh---c--CHHHHHHHH-HHHHHHhHHHHHhc--------chHHH
Confidence 46777532222222 2445667899999999644 2 366665555 46778888777642 13566
Q ss_pred HHHHHh-CCCEEEEEeC-------CHHHHHHHHhhcCCCCEEEEe--CCcc--hhhhhhccCCcccccccc
Q psy11975 594 LVKLAH-HENIRGVKDT-------DNIKLANMANQTKDLNFSVFA--GSAG--YLLSGLLVGCAGGINALS 652 (786)
Q Consensus 594 L~rLAe-iPNVVGIKDS-------Dl~ri~~ll~~~~~~df~Vf~--G~De--lLL~aL~~GAdG~Isg~a 652 (786)
+.+..+ -+.|+||=.- |+....+++.. .+.++.+.. |-.. .+......|++|++-|-+
T Consensus 166 l~rAl~~~a~iIGINNRnL~tf~vdl~~t~~L~~~-ip~~~~~VsESGI~t~~dv~~l~~~G~~a~LVGea 235 (258)
T 4a29_A 166 LDIALRIGARFIGIMSRDFETGEINKENQRKLISM-IPSNVVKVAKLGISERNEIEELRKLGVNAFLISSS 235 (258)
T ss_dssp HHHHHHTTCSEEEECSBCTTTCCBCHHHHHHHHTT-SCTTSEEEEEESSCCHHHHHHHHHTTCCEEEECHH
T ss_pred HHHHhcCCCcEEEEeCCCccccccCHHHHHHHHhh-CCCCCEEEEcCCCCCHHHHHHHHHCCCCEEEECHH
Confidence 766655 4789999532 88888888774 444544333 4432 244556789999998865
No 139
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=77.82 E-value=18 Score=36.57 Aligned_cols=115 Identities=20% Similarity=0.133 Sum_probs=70.4
Q ss_pred EEEeCCCCC------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC--Cc
Q psy11975 517 LLKPQKHTT------TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN--ID 588 (786)
Q Consensus 517 VIaGVGa~S------T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG--v~ 588 (786)
+|+.+-+.. ..+..++|+.+++.||.++.+. + .++.++|.+.+++||+--+--...+ +-
T Consensus 20 livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~-------~------~~~i~~ir~~v~~Pvig~~k~~~~~~~~~ 86 (229)
T 3q58_A 20 LIVSCQPVPGSPMDKPEIVAAMAQAAASAGAVAVRIE-------G------IENLRTVRPHLSVPIIGIIKRDLTGSPVR 86 (229)
T ss_dssp EEEECCCCTTSTTCSHHHHHHHHHHHHHTTCSEEEEE-------S------HHHHHHHGGGCCSCEEEECBCCCSSCCCC
T ss_pred EEEEEeCCCCCCCCCcchHHHHHHHHHHCCCcEEEEC-------C------HHHHHHHHHhcCCCEEEEEeecCCCCceE
Confidence 666666555 8899999999999999999872 2 3678999999999987333211112 22
Q ss_pred cC--HHHHHHHHh--CCCEEEEEe-----C-CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCcccc
Q psy11975 589 IS--VDTLVKLAH--HENIRGVKD-----T-DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGI 648 (786)
Q Consensus 589 LS--pelL~rLAe--iPNVVGIKD-----S-Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~I 648 (786)
++ .+.+.++.+ .+ ++-+=- . .+..+.+..+. .+..++.... +.+..+...|++...
T Consensus 87 I~~~~~~i~~~~~aGad-~I~l~~~~~~~p~~l~~~i~~~~~---~g~~v~~~v~t~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 87 ITPYLQDVDALAQAGAD-IIAFDASFRSRPVDIDSLLTRIRL---HGLLAMADCSTVNEGISCHQKGIEFIG 154 (229)
T ss_dssp BSCSHHHHHHHHHHTCS-EEEEECCSSCCSSCHHHHHHHHHH---TTCEEEEECSSHHHHHHHHHTTCSEEE
T ss_pred eCccHHHHHHHHHcCCC-EEEECccccCChHHHHHHHHHHHH---CCCEEEEecCCHHHHHHHHhCCCCEEE
Confidence 33 356666653 34 443321 1 44444444442 2455555443 335566778988664
No 140
>1f8m_A Isocitrate lyase, ICL; alpha-beta barrel, helix-swapping, closed conformation, bromopyuvate modification, structural genomics; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.1.12.7 PDB: 1f61_A 1f8i_A
Probab=77.60 E-value=7.9 Score=43.24 Aligned_cols=67 Identities=13% Similarity=0.061 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCc-CCccCHHHHHH
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVT-NIDISVDTLVK 596 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~T-Gv~LSpelL~r 596 (786)
..+++||+.++.+++ |||+|.+-+.. ++ .+++.++.++|....++.+++||. |..+ ...++++.++.
T Consensus 264 ~gld~AI~Ra~AYa~-gAD~if~e~~~---~~--~eei~~f~~~v~~~~P~~~La~n~sPsf~w~~~~~~~~~~~ 332 (429)
T 1f8m_A 264 NGIEPCIARAKAYAP-FADLIWMETGT---PD--LEAARQFSEAVKAEYPDQMLAYNCSPSFNWKKHLDDATIAK 332 (429)
T ss_dssp CSHHHHHHHHHHHGG-GCSEEEECCSS---CC--HHHHHHHHHHHHTTCTTCEEEEECCTTSCHHHHCCHHHHHH
T ss_pred cCHHHHHHHHHHHHh-cCCEEEeCCCC---CC--HHHHHHHHHHhcccCCCceeecCCCCCCCcccccchhhHhH
Confidence 469999999999988 99999885432 33 899999999987545655788987 4332 11255555444
No 141
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=77.57 E-value=6.4 Score=39.28 Aligned_cols=85 Identities=15% Similarity=0.148 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEE
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRG 605 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVG 605 (786)
..+.+++++.+++.|||++.+.-+...... .....+..++|++++++||++- |.--+++.+.++.+.. +-|
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~~~~--~~~~~~~i~~i~~~~~iPvi~~------Ggi~~~~~~~~~~~~G-ad~ 100 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISATHEE--RAILLDVVARVAERVFIPLTVG------GGVRSLEDARKLLLSG-ADK 100 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSSTTC--HHHHHHHHHHHHTTCCSCEEEE------SSCCSHHHHHHHHHHT-CSE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCccccC--ccccHHHHHHHHHhCCCCEEEE------CCcCCHHHHHHHHHcC-CCE
Confidence 357889999999999999988765433222 4556788899999999999983 3334567777776532 333
Q ss_pred EEeC-----CHHHHHHHHh
Q psy11975 606 VKDT-----DNIKLANMAN 619 (786)
Q Consensus 606 IKDS-----Dl~ri~~ll~ 619 (786)
+=.. +...+.++++
T Consensus 101 V~lg~~~l~~p~~~~~~~~ 119 (252)
T 1ka9_F 101 VSVNSAAVRRPELIRELAD 119 (252)
T ss_dssp EEECHHHHHCTHHHHHHHH
T ss_pred EEEChHHHhCcHHHHHHHH
Confidence 3333 4444555554
No 142
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=77.26 E-value=8.6 Score=37.69 Aligned_cols=130 Identities=8% Similarity=-0.017 Sum_probs=66.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHh-cC----CC-----CEEEEeCCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVAD-NS----PI-----PVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAe-At----dL-----PIiLYNiP~ 583 (786)
++||+++-+-.+.++ ++.+.++|||+|++..+.+.. ++.+.+..+..-. .. ++ ++.++---.
T Consensus 77 ~ipvi~~g~i~~~~~----~~~~~~~Gad~V~i~~~~~~~----~~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~ 148 (253)
T 1h5y_A 77 SIPVLVGGGVRSLED----ATTLFRAGADKVSVNTAAVRN----PQLVALLAREFGSQSTVVAIDAKWNGEYYEVYVKGG 148 (253)
T ss_dssp SSCEEEESSCCSHHH----HHHHHHHTCSEEEESHHHHHC----THHHHHHHHHHCGGGEEEEEEEEECSSSEEEEETTT
T ss_pred CCCEEEECCCCCHHH----HHHHHHcCCCEEEEChHHhhC----cHHHHHHHHHcCCCcEEEEEEeecCCCcEEEEEeCC
Confidence 478998777666554 455666899999998655422 2333333333211 01 11 022222100
Q ss_pred CcCCccCH-HHHHHHHhC-CCEEEE--------EeC-CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCcccccc
Q psy11975 584 VTNIDISV-DTLVKLAHH-ENIRGV--------KDT-DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGINA 650 (786)
Q Consensus 584 ~TGv~LSp-elL~rLAei-PNVVGI--------KDS-Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~Isg 650 (786)
......++ +.+.++.+. ...+.+ +.. +++.+.++.+. ..-.+-+-.|-. +.+...+..|++|++.|
T Consensus 149 ~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~-~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 149 REATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADS-VRIPVIASGGAGRVEHFYEAAAAGADAVLAA 227 (253)
T ss_dssp TEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHH-CSSCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred eecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHh-cCCCEEEeCCCCCHHHHHHHHHcCCcHHHHH
Confidence 00011233 445555443 344444 233 67777777653 322333334443 34566677899999998
Q ss_pred cc
Q psy11975 651 LS 652 (786)
Q Consensus 651 ~a 652 (786)
.+
T Consensus 228 sa 229 (253)
T 1h5y_A 228 SL 229 (253)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 143
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=77.11 E-value=1.5 Score=38.92 Aligned_cols=59 Identities=19% Similarity=0.071 Sum_probs=45.3
Q ss_pred CCCCCCCceEEEecc-cCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccch
Q psy11975 354 LLGLAEGDLVWGSVK-GYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQGL 414 (786)
Q Consensus 354 ~~~f~vGDLVWaKvk-G~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEgl 414 (786)
...+.+||+|-||-. ---|-+|+|.......+.+.|.|.+.++ .-.|..++|+|+...+
T Consensus 8 ~~~~kvGd~C~A~ys~Dg~wYrA~I~~i~~~~~~~~V~fiDYGN--~E~V~~~~Lrp~~~~~ 67 (88)
T 1g5v_A 8 LQQWKVGDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTGYGN--REEQNLSDLLSPICEV 67 (88)
T ss_dssp -CCCCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEEETTTCC--EEEEEGGGCBCCC---
T ss_pred cCCCCCCCEEEEEECCCCCEEEEEEEEecCCCCEEEEEEecCCC--EEEEcHHHcccCChhh
Confidence 347999999999974 4469999999976555789999998885 3457889999986644
No 144
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=76.30 E-value=9.2 Score=42.48 Aligned_cols=143 Identities=11% Similarity=0.018 Sum_probs=82.8
Q ss_pred CCeEEEeCCCCC-----HHHHHHHHHHHHHcCCCEEEEc--CCCCCCC--CCCHHHHHHHHHHHHhc-------------
Q psy11975 514 QADLLKPQKHTT-----TRATIDLTQKAAKAGANAALIL--CPYYFQK--KMTEDLIYEHFISVADN------------- 571 (786)
Q Consensus 514 RVPVIaGVGa~S-----T~EAIELAr~Ae~aGADAVmVi--PPyY~kp--s~S~eeLv~YFraIAeA------------- 571 (786)
+.+|++.++.+. .+|-++.++..++. ||++-+= .|---.. ..+.+.+.+..++|.++
T Consensus 181 ~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~-ad~ieiNiScPNt~Gl~~lq~~~~l~~ll~aV~~~~~~~~~~~~~~~~ 259 (415)
T 3i65_A 181 KHIVGVSIGKNKDTVNIVDDLKYCINKIGRY-ADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKEEIDNLEKNNIMNDE 259 (415)
T ss_dssp TCEEEEEECCCTTCSCHHHHHHHHHHHHGGG-CSEEEEECCCCC--------CCHHHHHHHHHHHHHHHHHHHHCCSCHH
T ss_pred CceEEEEeccccCccccHHHHHHHHHHHHhh-CCEEEEECCCCCCCCcccccCHHHHHHHHHHHHHHHHhhccccccccc
Confidence 468889999887 78888888888876 8988754 3432110 01356677777777665
Q ss_pred -------CCCC-EEEEeCCCCcCCccCHHHHHHH---Hh---CCCEEEEEeC----C--------------------HHH
Q psy11975 572 -------SPIP-VIIYNNTFVTNIDISVDTLVKL---AH---HENIRGVKDT----D--------------------NIK 613 (786)
Q Consensus 572 -------tdLP-IiLYNiP~~TGv~LSpelL~rL---Ae---iPNVVGIKDS----D--------------------l~r 613 (786)
..+| |++==-|. ++.+.+.++ ++ ...|+-.=-+ | +..
T Consensus 260 ~~~~~~~~~~P~V~VKi~pd-----~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~ 334 (415)
T 3i65_A 260 FLWFNTTKKKPLVFVKLAPD-----LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKF 334 (415)
T ss_dssp HHCCSSSSSCCEEEEEECSC-----CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHH
T ss_pred ccccccCCCCCeEEEEecCC-----CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHH
Confidence 3689 77766564 444334333 32 3444432100 1 123
Q ss_pred HHHHHhhcCCCCEEEEeCCc----chhhhhhccCCccccccccccc--cHHHHHHH
Q psy11975 614 LANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSAVL--GGPICELY 663 (786)
Q Consensus 614 i~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN~~--Pel~vaL~ 663 (786)
+.++.+ ..++++.|+...+ +.....+.+||++++.+.+.++ |.++.+|.
T Consensus 335 I~~v~~-~v~~~iPIIg~GGI~s~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~ 389 (415)
T 3i65_A 335 ICEMYN-YTNKQIPIIASGGIFSGLDALEKIEAGASVCQLYSCLVFNGMKSAVQIK 389 (415)
T ss_dssp HHHHHH-HTTTCSCEEECSSCCSHHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHH
T ss_pred HHHHHH-HhCCCCCEEEECCCCCHHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHH
Confidence 344433 3444566544333 2367778899999998887653 44444443
No 145
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=76.26 E-value=5.7 Score=41.78 Aligned_cols=148 Identities=10% Similarity=0.041 Sum_probs=92.9
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc--CCCCCC------CC--CCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALIL--CPYYFQ------KK--MTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmVi--PPyY~k------ps--~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..|+++++.+...++.++.|+.|+++ +|+|-+- .|.... .. -..+-+.+..++|.+++++||.+=--+
T Consensus 58 ~~~~~~QL~g~~~~~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~~~pv~vKir~- 135 (318)
T 1vhn_A 58 ERNVAVQIFGSEPNELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSVSGKFSVKTRL- 135 (318)
T ss_dssp CTTEEEEEECSCHHHHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHCSSEEEEEEES-
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhhCCCEEEEecC-
Confidence 35889988888899999999999999 9999775 343210 00 136778888899988889999886554
Q ss_pred CcCCccC--HHHHHHHHh--CCCEEEE---E-e--C---CHHHHHHHHhhcCCCCEEEE-eCC--c-chhhhhhc-cCCc
Q psy11975 584 VTNIDIS--VDTLVKLAH--HENIRGV---K-D--T---DNIKLANMANQTKDLNFSVF-AGS--A-GYLLSGLL-VGCA 645 (786)
Q Consensus 584 ~TGv~LS--pelL~rLAe--iPNVVGI---K-D--S---Dl~ri~~ll~~~~~~df~Vf-~G~--D-elLL~aL~-~GAd 645 (786)
|.+.. .+...+|.+ +..|.-. . + + +++ ++.+... ++.|+ +|. + +.+..++. .|++
T Consensus 136 --G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~----~i~~i~~-~ipVi~~GgI~s~~da~~~l~~~gad 208 (318)
T 1vhn_A 136 --GWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWK----ALSVLEK-RIPTFVSGDIFTPEDAKRALEESGCD 208 (318)
T ss_dssp --CSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGG----GGGGSCC-SSCEEEESSCCSHHHHHHHHHHHCCS
T ss_pred --CCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHH----HHHHHHc-CCeEEEECCcCCHHHHHHHHHcCCCC
Confidence 33221 144444443 3333221 0 1 1 332 2222223 55444 443 1 23556676 6999
Q ss_pred ccccccccc-ccHHHHHHHHHHHcCC
Q psy11975 646 GGINALSAV-LGGPICELYDLAKAGK 670 (786)
Q Consensus 646 G~Isg~aN~-~Pel~vaL~eA~~aGD 670 (786)
|++.|-+.+ -|+++.++.+.+..|.
T Consensus 209 ~V~iGR~~l~~P~l~~~~~~~~~~g~ 234 (318)
T 1vhn_A 209 GLLVARGAIGRPWIFKQIKDFLRSGK 234 (318)
T ss_dssp EEEESGGGTTCTTHHHHHHHHHHHSC
T ss_pred EEEECHHHHhCcchHHHHHHHHhCCC
Confidence 999997655 5888888888777553
No 146
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=76.10 E-value=1.7 Score=37.27 Aligned_cols=58 Identities=14% Similarity=0.059 Sum_probs=46.2
Q ss_pred CCCCCCCceEEEecc-cCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVK-GYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 354 ~~~f~vGDLVWaKvk-G~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
...+.+||+|-||-. ---|..|+|.......+.+.|+|.+.++ ...|..++|+++...
T Consensus 7 ~~~~~~G~~c~A~~s~Dg~wYRA~I~~i~~~~~~~~V~fiDYGN--~e~V~~~~Lr~l~~~ 65 (78)
T 2d9t_A 7 GKVWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFTDYGN--YEEVLLSNIKPVQTE 65 (78)
T ss_dssp CCCCCTTCEEEEECTTTCCEEEEEEEEECSSSSEEEEEETTTTE--EEEEEGGGEEECCCC
T ss_pred ccCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCC--eEEEcHHHeEeCCHH
Confidence 356899999999984 2369999999876545789999988884 456788999998664
No 147
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=76.05 E-value=6.1 Score=40.97 Aligned_cols=64 Identities=17% Similarity=0.140 Sum_probs=44.8
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA 598 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA 598 (786)
..+++|+.++..+++|||+|++-.+ ++ .++ .++|+++.++|+.+--.|...-..++.+.|.+|-
T Consensus 166 ~~~~ai~ra~a~~eAGAd~i~~e~~----~~--~~~----~~~i~~~~~~P~n~~~~~~~~~p~~~~~eL~~lG 229 (255)
T 2qiw_A 166 PMVEAIKRIKLMEQAGARSVYPVGL----ST--AEQ----VERLVDAVSVPVNITAHPVDGHGAGDLATLAGLG 229 (255)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCC----CS--HHH----HHHHHTTCSSCBEEECBTTTBBTTBCHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcCCcEEEEcCC----CC--HHH----HHHHHHhCCCCEEEEecCCCCCCCCCHHHHHHcC
Confidence 4899999999999999999998543 32 333 4567777888985543343212347778777773
No 148
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=76.01 E-value=12 Score=39.73 Aligned_cols=75 Identities=12% Similarity=0.040 Sum_probs=46.4
Q ss_pred CCCeEEEeCCC----CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 513 WQADLLKPQKH----TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 513 GRVPVIaGVGa----~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
+...|++=+-+ ...+++|+.|+.++++|||+|++-++. ++ .+++.++.++|. .++|++ +| |...| .
T Consensus 152 ~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e~~~---~~--~~~~~~i~~~~~--~~~P~i-~~-~~~~~-~ 221 (295)
T 1s2w_A 152 PDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMHSKK---AD--PSDIEAFMKAWN--NQGPVV-IV-PTKYY-K 221 (295)
T ss_dssp TTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEECCCS---SS--SHHHHHHHHHHT--TCSCEE-EC-CSTTT-T
T ss_pred CCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEcCCC---CC--HHHHHHHHHHcC--CCCCEE-Ee-CCCCC-C
Confidence 44556654332 347999999999999999999986421 22 455555444442 238985 45 44223 3
Q ss_pred cCHHHHHHH
Q psy11975 589 ISVDTLVKL 597 (786)
Q Consensus 589 LSpelL~rL 597 (786)
.+.+.|.+|
T Consensus 222 ~~~~eL~~l 230 (295)
T 1s2w_A 222 TPTDHFRDM 230 (295)
T ss_dssp SCHHHHHHH
T ss_pred CCHHHHHHc
Confidence 455555555
No 149
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=75.67 E-value=3.2 Score=44.07 Aligned_cols=49 Identities=18% Similarity=0.098 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCCEEEEc-----CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEe
Q psy11975 531 DLTQKAAKAGANAALIL-----CPYYFQKKMTEDLIYEHFISVADNSPIPVIIYN 580 (786)
Q Consensus 531 ELAr~Ae~aGADAVmVi-----PPyY~kps~S~eeLv~YFraIAeAtdLPIiLYN 580 (786)
++|+.++++||++++++ ...|+.- +.-..-.++.++|.+++++||+...
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g-~~R~~~~~~i~~i~~~v~iPvl~k~ 85 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDG-VARSVDPLKIEEIRKCISINVLAKV 85 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCC-CCCCCCHHHHHHHHTTCCSEEEEEE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCC-cccCCCHHHHHHHHHhcCCCEEEec
Confidence 78999999999999999 4455543 0011136888999999999999875
No 150
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=75.45 E-value=21 Score=36.83 Aligned_cols=105 Identities=11% Similarity=0.084 Sum_probs=71.6
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcC--Ccc
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTN--IDI 589 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TG--v~L 589 (786)
|+-.|++-+.+.+.++.++.++.+.+.|||.|=+=-=++-... +.+.+.+-...+.+.. ++|+++=.=+..-| ..+
T Consensus 18 g~PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~-~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~ 96 (258)
T 4h3d_A 18 GRPKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVE-NIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLI 96 (258)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTT-CHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCC
T ss_pred CCCEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccC-CHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCC
Confidence 5555778999999999999999999999999988877665543 4778888888888776 79998766554433 245
Q ss_pred CHHHHHHH----HhCCC--EEEEEeC-CHHHHHHHH
Q psy11975 590 SVDTLVKL----AHHEN--IRGVKDT-DNIKLANMA 618 (786)
Q Consensus 590 SpelL~rL----AeiPN--VVGIKDS-Dl~ri~~ll 618 (786)
+.+...+| ++... .+=|-.. +-+.+.+++
T Consensus 97 ~~~~~~~ll~~~~~~~~~d~iDvEl~~~~~~~~~l~ 132 (258)
T 4h3d_A 97 SRDYYTTLNKEISNTGLVDLIDVELFMGDEVIDEVV 132 (258)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEGGGCHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCchhhHHhhhccHHHHHHHH
Confidence 55544333 34433 3333333 444444444
No 151
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=75.36 E-value=6.1 Score=41.90 Aligned_cols=82 Identities=16% Similarity=0.098 Sum_probs=50.4
Q ss_pred CCCeEEEeCCC---CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCC-cCCc
Q psy11975 513 WQADLLKPQKH---TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFV-TNID 588 (786)
Q Consensus 513 GRVPVIaGVGa---~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~-TGv~ 588 (786)
+.+.|++=+.+ ...+++|+.|+.++++|||+|++-.+ ++ .+++ ++|+++.++|++. |.=.. ....
T Consensus 150 ~~~~i~aRtda~~~~gl~~ai~ra~ay~eAGAd~i~~e~~----~~--~~~~----~~i~~~~~iP~~~-N~~~~g~~p~ 218 (295)
T 1xg4_A 150 PDFVIMARTDALAVEGLDAAIERAQAYVEAGAEMLFPEAI----TE--LAMY----RQFADAVQVPILA-NITEFGATPL 218 (295)
T ss_dssp TTSEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEETTC----CS--HHHH----HHHHHHHCSCBEE-ECCSSSSSCC
T ss_pred CCcEEEEecHHhhhcCHHHHHHHHHHHHHcCCCEEEEeCC----CC--HHHH----HHHHHHcCCCEEE-EecccCCCCC
Confidence 45666665443 24589999999999999999998753 33 4544 4455555689765 43110 1124
Q ss_pred cCHHHHHHHHhCCCEEEEEeC
Q psy11975 589 ISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 589 LSpelL~rLAeiPNVVGIKDS 609 (786)
++.+.|.+| ++..+-+.
T Consensus 219 ~~~~eL~~~----G~~~v~~~ 235 (295)
T 1xg4_A 219 FTTDELRSA----HVAMALYP 235 (295)
T ss_dssp CCHHHHHHT----TCSEEEES
T ss_pred CCHHHHHHc----CCCEEEEC
Confidence 666666655 34444444
No 152
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=75.19 E-value=0.59 Score=49.57 Aligned_cols=24 Identities=58% Similarity=1.089 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCCcccc
Q psy11975 204 HHHSHHHRSHSHHHHQSQSKHHHSKPLSRTM 234 (786)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (786)
|||+|||.-|.|| |||-.|.+.|.
T Consensus 2 ~~~~~~~~~~~~~-------~~~~~~~~~~~ 25 (314)
T 3fwy_A 2 HHHHHHHGMHHHH-------HHHGSPKDLTI 25 (314)
T ss_dssp -------------------------------
T ss_pred Ccccccccccccc-------cccCCCCcCCC
Confidence 5555555544443 45566666654
No 153
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=74.85 E-value=24 Score=35.75 Aligned_cols=116 Identities=16% Similarity=0.111 Sum_probs=69.9
Q ss_pred eEEEeCCCCC------HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC--C
Q psy11975 516 DLLKPQKHTT------TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN--I 587 (786)
Q Consensus 516 PVIaGVGa~S------T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG--v 587 (786)
.+|+.+-+.. ..+..++|+.+++.||.++.+. + .++.++|.+.+++||+--+--...| +
T Consensus 19 ~livscq~~~~~pl~~~~~~~~~A~a~~~~Ga~~i~~~-------~------~~~i~~ir~~v~~Pvig~~k~d~~~~~~ 85 (232)
T 3igs_A 19 GLIVSCQPVPGSPLDKPEIVAAMALAAEQAGAVAVRIE-------G------IDNLRMTRSLVSVPIIGIIKRDLDESPV 85 (232)
T ss_dssp CEEEECCCCTTCTTCSHHHHHHHHHHHHHTTCSEEEEE-------S------HHHHHHHHTTCCSCEEEECBCCCSSCCC
T ss_pred CEEEEEeCCCCCCCCCcchHHHHHHHHHHCCCeEEEEC-------C------HHHHHHHHHhcCCCEEEEEeecCCCcce
Confidence 3666666555 8899999999999999999872 2 3678999999999986323221122 2
Q ss_pred ccC--HHHHHHHHh--CCCEEEEE-----eC-CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCcccc
Q psy11975 588 DIS--VDTLVKLAH--HENIRGVK-----DT-DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGI 648 (786)
Q Consensus 588 ~LS--pelL~rLAe--iPNVVGIK-----DS-Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~I 648 (786)
-++ .+.+.++.+ .+ ++-+= .. .+..+.+..+. .++.++.... +.+..+...|++...
T Consensus 86 ~I~~~~~~i~~~~~~Gad-~V~l~~~~~~~p~~l~~~i~~~~~---~g~~v~~~v~t~eea~~a~~~Gad~Ig 154 (232)
T 3igs_A 86 RITPFLDDVDALAQAGAA-IIAVDGTARQRPVAVEALLARIHH---HHLLTMADCSSVDDGLACQRLGADIIG 154 (232)
T ss_dssp CBSCSHHHHHHHHHHTCS-EEEEECCSSCCSSCHHHHHHHHHH---TTCEEEEECCSHHHHHHHHHTTCSEEE
T ss_pred EeCccHHHHHHHHHcCCC-EEEECccccCCHHHHHHHHHHHHH---CCCEEEEeCCCHHHHHHHHhCCCCEEE
Confidence 233 456666653 34 33331 12 44444444442 2455554433 335566778888653
No 154
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=74.63 E-value=47 Score=32.94 Aligned_cols=124 Identities=11% Similarity=0.047 Sum_probs=64.6
Q ss_pred CeEEEeCCCCCH--HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 515 ADLLKPQKHTTT--RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 515 VPVIaGVGa~ST--~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
+||++++.-+.. ....+.++.+.++|||+|.+.. . + .++..++.+ .++..++.+++-=.|. -+.+
T Consensus 81 ~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~--~--~---~~~~~~~~~-~~~~~g~~~~~~i~~~-----t~~e 147 (248)
T 1geq_A 81 TPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVD--L--P---VFHAKEFTE-IAREEGIKTVFLAAPN-----TPDE 147 (248)
T ss_dssp CCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETT--C--C---GGGHHHHHH-HHHHHTCEEEEEECTT-----CCHH
T ss_pred CCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECC--C--C---hhhHHHHHH-HHHHhCCCeEEEECCC-----CHHH
Confidence 577776542110 0115678888899999999952 1 1 122323322 3334455555433331 2456
Q ss_pred HHHHHHh-CCCEEEE---------EeC----CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCcccccccc
Q psy11975 593 TLVKLAH-HENIRGV---------KDT----DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 593 lL~rLAe-iPNVVGI---------KDS----Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~Isg~a 652 (786)
.+..+.+ .+.++++ |.. .+..+.++.+ ..+-.+.+-.|-. +.+...+..|++|++.|.+
T Consensus 148 ~~~~~~~~~d~~i~~~~~~G~~g~~~~~~~~~~~~i~~l~~-~~~~pi~~~GGI~~~e~i~~~~~~Gad~vivGsa 222 (248)
T 1geq_A 148 RLKVIDDMTTGFVYLVSLYGTTGAREEIPKTAYDLLRRAKR-ICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSA 222 (248)
T ss_dssp HHHHHHHHCSSEEEEECCC-------CCCHHHHHHHHHHHH-HCSSCEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHhcCCCeEEEEECCccCCCCCCCChhHHHHHHHHHh-hcCCCEEEEeecCCHHHHHHHHHcCCCEEEEcHH
Confidence 6666653 3434433 211 1335555544 2233344444443 3455566899999999975
No 155
>3kdn_A Rubisco, ribulose bisphosphate carboxylase; ribulose-1,5-bisphosphate carboxylase/oxygenase, Ca dioxide fixation, lyase, magnesium; HET: KCX CAP; 2.09A {Thermococcus kodakaraensis} PDB: 3a13_A* 3kdo_A* 3a12_A* 1geh_A*
Probab=74.32 E-value=8.9 Score=43.00 Aligned_cols=93 Identities=12% Similarity=-0.037 Sum_probs=56.6
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC----
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN---- 586 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG---- 586 (786)
++.+.--.++|++. .+|.++.|+.|.++|++++|+-. +-..++ --..+.++++ ..++||.++-. ..|
T Consensus 220 TGe~k~y~~NiTa~-~~eM~~Ra~~a~e~G~~~~mvd~-~~~G~~-a~~~l~~~~~----~~~l~lh~HrA--~~ga~~r 290 (444)
T 3kdn_A 220 TGEKKTWFANITAD-LLEMEQRLEVLADLGLKHAMVDV-VITGWG-ALRYIRDLAA----DYGLAIHGHRA--MHAAFTR 290 (444)
T ss_dssp HCCCCEEEEECCSS-HHHHHHHHHHHHHHTCCEEEEEH-HHHCHH-HHHHHHHHHH----HHTCEEEEECT--TTHHHHS
T ss_pred hCCcceEEeecCCC-HHHHHHHHHHHHHcCCCEEEEcc-ccccHH-HHHHHHHhcc----ccCeEEEEccC--ccccccc
Confidence 34444456799997 99999999999999999988864 221222 1223333333 34688777633 222
Q ss_pred ---CccCHHHHHHHHh--------CCCE-EEEEeC-CHHH
Q psy11975 587 ---IDISVDTLVKLAH--------HENI-RGVKDT-DNIK 613 (786)
Q Consensus 587 ---v~LSpelL~rLAe--------iPNV-VGIKDS-Dl~r 613 (786)
..++.-++.+|.+ .+++ +| |.+ +...
T Consensus 291 ~~~hGi~~~vl~Kl~RLaG~D~ih~gt~g~G-Kleg~~~~ 329 (444)
T 3kdn_A 291 NPYHGISMFVLAKLYRLIGIDQLHVGTAGAG-KLEGERDI 329 (444)
T ss_dssp CTTSEECHHHHHHHHHHHTCSEEECCCTTSS-SBCCCHHH
T ss_pred CCCCCcCHHHHHHHHHHcCCCeeeccccccC-CcCCCHHH
Confidence 2355566655542 3666 56 777 5433
No 156
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.21 E-value=2.7 Score=36.06 Aligned_cols=56 Identities=13% Similarity=0.246 Sum_probs=45.2
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
...|.+||.|-|+-.-=-|-||+|...... +.+.|.|.+.+ .-.|...+|+++.+.
T Consensus 7 ~~~~kvGd~clA~wsDg~~Y~A~I~~v~~~-~~~~V~f~Dyn---~e~v~~~~lrplp~~ 62 (74)
T 2equ_A 7 GFDFKAGEEVLARWTDCRYYPAKIEAINKE-GTFTVQFYDGV---IRCLKRMHIKAMPED 62 (74)
T ss_dssp CCCCCTTCEEEEECSSSSEEEEEEEEESTT-SSEEEEETTSC---EEEECGGGEECCCGG
T ss_pred CCCCCCCCEEEEECCCCCEEEEEEEEECCC-CEEEEEEecCC---eEEecHHHCeeCChh
Confidence 457999999999987667999999987643 78999998873 344788899998764
No 157
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=74.19 E-value=4.4 Score=43.72 Aligned_cols=84 Identities=10% Similarity=-0.023 Sum_probs=53.8
Q ss_pred cCCCCeEEEeCCC--------CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC---CCHHHHHHHHHHHHhcCCCCEEEE
Q psy11975 511 REWQADLLKPQKH--------TTTRATIDLTQKAAKAGANAALILCPYYFQKK---MTEDLIYEHFISVADNSPIPVIIY 579 (786)
Q Consensus 511 vaGRVPVIaGVGa--------~ST~EAIELAr~Ae~aGADAVmViPPyY~kps---~S~eeLv~YFraIAeAtdLPIiLY 579 (786)
++.++||.+=++. .+.++++++++.++++|+|.+-+....+.... ..+..-.++.+.|.+++++||+.
T Consensus 222 vg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~- 300 (363)
T 3l5l_A 222 WPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTS- 300 (363)
T ss_dssp SCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEE-
T ss_pred cCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEE-
Confidence 3445677764432 56889999999999999999998764322100 00111245667777777888874
Q ss_pred eCCCCcCCccCHHHHHHHHhC
Q psy11975 580 NNTFVTNIDISVDTLVKLAHH 600 (786)
Q Consensus 580 NiP~~TGv~LSpelL~rLAei 600 (786)
.|.--+++...++.+.
T Consensus 301 -----~GgI~s~e~a~~~l~~ 316 (363)
T 3l5l_A 301 -----AWGFGTPQLAEAALQA 316 (363)
T ss_dssp -----CSSTTSHHHHHHHHHT
T ss_pred -----eCCCCCHHHHHHHHHC
Confidence 3433467777777643
No 158
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=74.18 E-value=2.3 Score=43.82 Aligned_cols=63 Identities=14% Similarity=0.173 Sum_probs=45.6
Q ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE--Ee-CCCCcC
Q psy11975 519 KPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVII--YN-NTFVTN 586 (786)
Q Consensus 519 aGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiL--YN-iP~~TG 586 (786)
+-.+..+.+.+.+.++.+.+.|||++.+-- ..+++.+.+.+..++|.+ +++||++ |+ +|...|
T Consensus 12 i~~gDP~~~~t~~~~~~l~~~GaD~ielG~----S~Gvt~~~~~~~v~~ir~-~~~Pivlm~y~~n~i~~G 77 (240)
T 1viz_A 12 VFKLDPNKDLPDEQLEILCESGTDAVIIGG----SDGVTEDNVLRMMSKVRR-FLVPCVLEVSAIEAIVPG 77 (240)
T ss_dssp EEEECTTSCCCHHHHHHHHTSCCSEEEECC--------CHHHHHHHHHHHTT-SSSCEEEECSCGGGCCSC
T ss_pred EEeeCCCccccHHHHHHHHHcCCCEEEECC----CCCCCHHHHHHHHHHhhC-cCCCEEEecCccccccCC
Confidence 334455556667778899999999999986 233568889999999987 8999996 55 554344
No 159
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=74.18 E-value=33 Score=37.28 Aligned_cols=129 Identities=12% Similarity=0.081 Sum_probs=72.3
Q ss_pred CeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHH--------------------------------
Q psy11975 515 ADLLKPQKH-TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLI-------------------------------- 561 (786)
Q Consensus 515 VPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeL-------------------------------- 561 (786)
.+...+..- .+-+.+.++.++|+++|+.+++++--.-.... -+.++
T Consensus 122 ~~~wfQlY~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~-R~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (352)
T 3sgz_A 122 GFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGN-RRRDKRNQLNLEANILKAALRALKEEKPTQSVPVLFP 200 (352)
T ss_dssp CEEEEECCCCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCC-CHHHHHHHHHSCHHHHTTCC---------------CC
T ss_pred ccceeccccCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCc-chhhhhcCCCCCcccchhhhcccccccccchhhhhcc
Confidence 345555432 25677788999999999999998752211000 01111
Q ss_pred -----HHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC------------CHHHHHHHHhhcCCC
Q psy11975 562 -----YEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT------------DNIKLANMANQTKDL 624 (786)
Q Consensus 562 -----v~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS------------Dl~ri~~ll~~~~~~ 624 (786)
.+..+.|.+.+++||++=.+ ++++...++.+. .+-||.-+ ++..+.++.+. .++
T Consensus 201 d~~~~w~~i~~lr~~~~~PvivK~v-------~~~e~A~~a~~~-GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~a-v~~ 271 (352)
T 3sgz_A 201 KASFCWNDLSLLQSITRLPIILKGI-------LTKEDAELAMKH-NVQGIVVSNHGGRQLDEVSASIDALREVVAA-VKG 271 (352)
T ss_dssp CTTCCHHHHHHHHHHCCSCEEEEEE-------CSHHHHHHHHHT-TCSEEEECCGGGTSSCSSCCHHHHHHHHHHH-HTT
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEec-------CcHHHHHHHHHc-CCCEEEEeCCCCCccCCCccHHHHHHHHHHH-hCC
Confidence 13355555667788887764 345555555432 22222221 23444444442 234
Q ss_pred CEEEEeCCc----chhhhhhccCCccccccccc
Q psy11975 625 NFSVFAGSA----GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 625 df~Vf~G~D----elLL~aL~~GAdG~Isg~aN 653 (786)
++.|+.-.+ ...+.+|++||++++.|...
T Consensus 272 ~ipVia~GGI~~g~Dv~kaLalGA~aV~iGr~~ 304 (352)
T 3sgz_A 272 KIEVYMDGGVRTGTDVLKALALGARCIFLGRPI 304 (352)
T ss_dssp SSEEEEESSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred CCeEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 555543222 23677888999999988753
No 160
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=74.05 E-value=32 Score=37.61 Aligned_cols=130 Identities=15% Similarity=0.152 Sum_probs=76.5
Q ss_pred CeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEc-------------------CCCC---C--------CC------CC-
Q psy11975 515 ADLLKPQKH-TTTRATIDLTQKAAKAGANAALIL-------------------CPYY---F--------QK------KM- 556 (786)
Q Consensus 515 VPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmVi-------------------PPyY---~--------kp------s~- 556 (786)
.|+.+++.. .+.+...++++.|+++|++++.+. ||.. . .+ +.
T Consensus 147 ~~~~~QLy~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~~~p~~~~~~g~~ 226 (392)
T 2nzl_A 147 ALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLSFSPEENFGDDSG 226 (392)
T ss_dssp SEEEEEECCBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------C
T ss_pred CcEEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcccCccccccCcch
Confidence 467777644 567788899999999999999883 2221 0 00 00
Q ss_pred ---------CHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC------------CHHHHH
Q psy11975 557 ---------TEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT------------DNIKLA 615 (786)
Q Consensus 557 ---------S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS------------Dl~ri~ 615 (786)
+.+-..+..+.|.+.+++||++=.+ ++++...++.+. .+-+|.-+ ++..+.
T Consensus 227 ~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv-------~~~e~A~~a~~a-Gad~I~vs~~ggr~~~~g~~~~~~l~ 298 (392)
T 2nzl_A 227 LAAYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI-------LRGDDAREAVKH-GLNGILVSNHGARQLDGVPATIDVLP 298 (392)
T ss_dssp HHHHHHHHBCTTCCHHHHHHHC--CCSCEEEEEE-------CCHHHHHHHHHT-TCCEEEECCGGGTSSTTCCCHHHHHH
T ss_pred HHHHHhhcCChHHHHHHHHHHHHhhCCCEEEEec-------CCHHHHHHHHHc-CCCEEEeCCCCCCcCCCCcChHHHHH
Confidence 0111233466777778899998753 457776666653 22222222 344455
Q ss_pred HHHhhcCCCCEEEEeCCc----chhhhhhccCCccccccccc
Q psy11975 616 NMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 616 ~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN 653 (786)
++.+. .++++.|+...+ ...+.+|++||++++.|...
T Consensus 299 ~v~~a-v~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~ 339 (392)
T 2nzl_A 299 EIVEA-VEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPI 339 (392)
T ss_dssp HHHHH-HTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHHH-cCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHH
Confidence 55442 344666665332 23677888999999988743
No 161
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=73.90 E-value=15 Score=36.89 Aligned_cols=116 Identities=13% Similarity=0.145 Sum_probs=71.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCCCCEEE---EeCCCCcCCccCHHHHHHH
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVADNSPIPVII---YNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAeAtdLPIiL---YNiP~~TGv~LSpelL~rL 597 (786)
|.+....-+..++.|.+.|||+|-+.-+... +.. ..+.+.+-.++|.++++ |+++ ++.| .++.+.+.++
T Consensus 65 g~~~~~~k~~~~~~A~~~Gad~Id~viN~g~~~~~-~~~~~~~~i~~v~~a~~-pv~vKvi~e~~-----~l~~~~~~~~ 137 (225)
T 1mzh_A 65 GLNKTSVKVKEAVEAVRDGAQELDIVWNLSAFKSE-KYDFVVEELKEIFRETP-SAVHKVIVETP-----YLNEEEIKKA 137 (225)
T ss_dssp CCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT-CHHHHHHHHHHHHHTCT-TSEEEEECCGG-----GCCHHHHHHH
T ss_pred CccchhhhHHHHHHHHHcCCCEEEEEecHHHHhcC-ChHHHHHHHHHHHHHhc-CceEEEEEeCC-----CCCHHHHHHH
Confidence 4566777778889999999999987555433 222 46777778999998887 6653 2333 3566655555
Q ss_pred Hh---CCCEEEEEeC--------CHHHHHHHHhhcCCCCEEEEe-C-Cc--chhhhhhccCCc
Q psy11975 598 AH---HENIRGVKDT--------DNIKLANMANQTKDLNFSVFA-G-SA--GYLLSGLLVGCA 645 (786)
Q Consensus 598 Ae---iPNVVGIKDS--------Dl~ri~~ll~~~~~~df~Vf~-G-~D--elLL~aL~~GAd 645 (786)
++ --.+-+||-+ ++..+..+.+ ..++++.|.. | -. +.++..+.+|++
T Consensus 138 a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~-~v~~~ipVia~GGI~t~~da~~~l~aGA~ 199 (225)
T 1mzh_A 138 VEICIEAGADFIKTSTGFAPRGTTLEEVRLIKS-SAKGRIKVKASGGIRDLETAISMIEAGAD 199 (225)
T ss_dssp HHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHH-HHTTSSEEEEESSCCSHHHHHHHHHTTCS
T ss_pred HHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHH-HhCCCCcEEEECCCCCHHHHHHHHHhCch
Confidence 42 2345555744 4555655554 2334555433 2 22 236667788988
No 162
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=76.06 E-value=0.66 Score=40.69 Aligned_cols=55 Identities=18% Similarity=0.260 Sum_probs=44.3
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
..|.+||.|-||-.---|-||+|..... .+.|.|.|.+ ++ ...|..++|+|+.+.
T Consensus 5 ~~~kvGd~clAkwsDg~wY~A~I~~v~~-~~~y~V~F~D-Gn--~E~V~~s~LrPl~~~ 59 (81)
T 2ldm_A 5 SEFQINEQVLASWSDSRFYPAKVTAVNK-DGTYTVKFYD-GV--VQTVKHIHVKAFSKD 59 (81)
Confidence 3589999999998777899999999763 3589999998 64 345788899998654
No 163
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=73.76 E-value=7.7 Score=40.71 Aligned_cols=59 Identities=19% Similarity=0.124 Sum_probs=40.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHH
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rL 597 (786)
..+++|+.++.++++|||+|++-.. ++ .+++ ++|+++.++|+ .++. ....++.+.|.+|
T Consensus 166 ~~~~ai~Ra~ay~eAGAd~i~~e~~----~~--~~~~----~~i~~~~~~P~-n~~~---~~~~~~~~eL~~l 224 (275)
T 2ze3_A 166 RLAETVRRGQAYADAGADGIFVPLA----LQ--SQDI----RALADALRVPL-NVMA---FPGSPVPRALLDA 224 (275)
T ss_dssp HHHHHHHHHHHHHHTTCSEEECTTC----CC--HHHH----HHHHHHCSSCE-EEEC---CTTSCCHHHHHHT
T ss_pred hHHHHHHHHHHHHHCCCCEEEECCC----CC--HHHH----HHHHHhcCCCE-EEec---CCCCCCHHHHHHc
Confidence 5799999999999999999988653 33 4444 55666777998 3442 1124555555544
No 164
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=73.50 E-value=47 Score=34.17 Aligned_cols=59 Identities=15% Similarity=0.072 Sum_probs=37.9
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC-----CCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPY-----YFQKKMTEDLIYEHFISVADNSPIPVIIY 579 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPy-----Y~kps~S~eeLv~YFraIAeAtdLPIiLY 579 (786)
+.++|+.+.. .++++.+.+.||+++.+.-.. ++.- .......+..++|.+.+++|+++.
T Consensus 21 ~~~~i~~~~~------~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G-~~~~~~~~~i~~i~~~~~~Pvi~~ 84 (297)
T 2zbt_A 21 KGGVIMDVTT------PEQAVIAEEAGAVAVMALERVPADIRAQGG-VARMSDPKIIKEIMAAVSIPVMAK 84 (297)
T ss_dssp TTEEEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHHTTC-CCCCCCHHHHHHHHTTCSSCEEEE
T ss_pred hCCeeeeech------HHHHHHHHHCCCcEEEeccccchHHHhhcC-CccCCCHHHHHHHHHhcCCCeEEE
Confidence 3478887765 789999999999999874210 0000 000002355678888889999864
No 165
>2diq_A Tudor and KH domain-containing protein; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=73.31 E-value=4.7 Score=36.14 Aligned_cols=78 Identities=17% Similarity=0.286 Sum_probs=56.9
Q ss_pred CCCCCCceEEEecc-cCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccchHHHhHhhhhccCCcccccc
Q psy11975 355 LGLAEGDLVWGSVK-GYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQGLEAHHRSRKKLQGLPVVAGQ 433 (786)
Q Consensus 355 ~~f~vGDLVWaKvk-G~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEglEaf~~~~kr~rkLpv~agk 433 (786)
..+.+||+|=|+.. ---|+-|+|..... .+.+.|.|-..++ ...|..++|+++.+. | ..+|..+-+
T Consensus 31 ~~~~~G~~c~a~~~~d~~wyRA~V~~~~~-~~~~~V~fvDyGn--~e~v~~~~Lr~l~~~---f-------~~lP~qA~~ 97 (110)
T 2diq_A 31 LTVHVGDIVAAPLPTNGSWYRARVLGTLE-NGNLDLYFVDFGD--NGDCPLKDLRALRSD---F-------LSLPFQAIE 97 (110)
T ss_dssp CCCCTTCEEEECCTTTCSCEEEEECCCCS-SSCEEEEETTTCC--EEEECGGGCEECCHH---H-------HSSCCSSCC
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECC-CCeEEEEEEeCCC--eEEEehHHhhcCcHH---H-------hCCCcceEE
Confidence 35789999999974 34699999998754 3689999988885 456888999998653 2 345666666
Q ss_pred cccccCCCCCCc
Q psy11975 434 AHFAGAHPGPGV 445 (786)
Q Consensus 434 a~faga~pg~~~ 445 (786)
..+++-.|-.+.
T Consensus 98 c~L~~v~p~~~s 109 (110)
T 2diq_A 98 CSLARIASGPSS 109 (110)
T ss_dssp SCSSCSCCSCCC
T ss_pred EEECCeEECCCC
Confidence 667766665443
No 166
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=73.21 E-value=12 Score=38.96 Aligned_cols=120 Identities=13% Similarity=0.107 Sum_probs=72.1
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDT 593 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpel 593 (786)
.+||+..=.-.+.. .+ ..|.++|||+|+++.... +++++.++++ .+...++.+++=- -+.+.
T Consensus 113 ~lPvl~kdfiid~~-qv---~~A~~~GAD~VlLi~a~l-----~~~~l~~l~~-~a~~lGl~~lvev--------~t~ee 174 (272)
T 3qja_A 113 SIPVLRKDFVVQPY-QI---HEARAHGADMLLLIVAAL-----EQSVLVSMLD-RTESLGMTALVEV--------HTEQE 174 (272)
T ss_dssp SSCEEEESCCCSHH-HH---HHHHHTTCSEEEEEGGGS-----CHHHHHHHHH-HHHHTTCEEEEEE--------SSHHH
T ss_pred CCCEEECccccCHH-HH---HHHHHcCCCEEEEecccC-----CHHHHHHHHH-HHHHCCCcEEEEc--------CCHHH
Confidence 57998753332222 23 445579999999975432 2566555544 4555788776421 23555
Q ss_pred HHHHHh-CCCEEEEEe------C-CHHHHHHHHhhcCCCCEEEEeCC--c--chhhhhhccCCcccccccc
Q psy11975 594 LVKLAH-HENIRGVKD------T-DNIKLANMANQTKDLNFSVFAGS--A--GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 594 L~rLAe-iPNVVGIKD------S-Dl~ri~~ll~~~~~~df~Vf~G~--D--elLL~aL~~GAdG~Isg~a 652 (786)
+.+..+ =..++|+=. . |+..+.++... ...++.++.+. . +.+...+.+|++|++.|.+
T Consensus 175 ~~~A~~~Gad~IGv~~r~l~~~~~dl~~~~~l~~~-v~~~~pvVaegGI~t~edv~~l~~~GadgvlVGsa 244 (272)
T 3qja_A 175 ADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPG-LPSSVIRIAESGVRGTADLLAYAGAGADAVLVGEG 244 (272)
T ss_dssp HHHHHHHTCSEEEEESBCTTTCCBCTTHHHHHGGG-SCTTSEEEEESCCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHCCCCEEEECCCcccccccCHHHHHHHHHh-CcccCEEEEECCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 655444 356888853 1 67777777663 33344444433 2 2355667899999999975
No 167
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=73.16 E-value=0.71 Score=49.83 Aligned_cols=17 Identities=24% Similarity=0.317 Sum_probs=13.2
Q ss_pred HHHHHHHcCCCEEEEcC
Q psy11975 532 LTQKAAKAGANAALILC 548 (786)
Q Consensus 532 LAr~Ae~aGADAVmViP 548 (786)
-+.-|..++||.++++.
T Consensus 236 Aa~lA~~l~Ad~LiiLT 252 (332)
T 4axs_A 236 LAKIADAVNADIFVVLT 252 (332)
T ss_dssp HHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHhCCceEEEEe
Confidence 45667788999988875
No 168
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=73.09 E-value=16 Score=38.93 Aligned_cols=138 Identities=9% Similarity=-0.025 Sum_probs=83.7
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC-C----CCCCCC---CCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILC-P----YYFQKK---MTEDLIYEHFISVADNS-PIPVIIYNNTFVTNI 587 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViP-P----yY~kps---~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv 587 (786)
++.++-... -|+.++++|+|++.+.. - .+..|+ ++-++++.+.+.|++.+ ++| ++-|.|.-+|
T Consensus 21 ~~~~a~D~~------sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~P-viaD~d~Gyg- 92 (302)
T 3fa4_A 21 VAPGVYDGL------SARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTP-VIADADTGYG- 92 (302)
T ss_dssp EEEEECSHH------HHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSC-EEEECTTTTS-
T ss_pred EEecCcCHH------HHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCC-EEEECCCCCC-
Confidence 456777632 35667789999998842 1 112222 46899999999999986 899 6788885444
Q ss_pred ccCHHHHHH----HHhCCCEEEEEeC--C-------------------HHHHHHHHhhc--CCCCEEEEeCCcchhh---
Q psy11975 588 DISVDTLVK----LAHHENIRGVKDT--D-------------------NIKLANMANQT--KDLNFSVFAGSAGYLL--- 637 (786)
Q Consensus 588 ~LSpelL~r----LAeiPNVVGIKDS--D-------------------l~ri~~ll~~~--~~~df~Vf~G~DelLL--- 637 (786)
+++.+.+ |.+ -.+.|||.+ . ..++...+... .+++|.|..=.|.++.
T Consensus 93 --~~~~v~~tv~~l~~-aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gl 169 (302)
T 3fa4_A 93 --GPIMVARTTEQYSR-SGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGY 169 (302)
T ss_dssp --SHHHHHHHHHHHHH-TTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCH
T ss_pred --CHHHHHHHHHHHHH-cCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCH
Confidence 3443333 333 478999888 1 12333333321 2567877665565421
Q ss_pred --------hhhccCCccccccccccccHHHHHHHHHH
Q psy11975 638 --------SGLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 638 --------~aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
....+|+|++..-.- --++.+.++.+++
T Consensus 170 deAi~Ra~ay~eAGAD~ifi~g~-~~~~ei~~~~~~~ 205 (302)
T 3fa4_A 170 EESVARLRAARDAGADVGFLEGI-TSREMARQVIQDL 205 (302)
T ss_dssp HHHHHHHHHHHTTTCSEEEETTC-CCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCEEeecCC-CCHHHHHHHHHHh
Confidence 134578888754321 2356666666665
No 169
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=73.05 E-value=0.71 Score=54.75 Aligned_cols=26 Identities=54% Similarity=1.115 Sum_probs=0.0
Q ss_pred CCCCCccccCCCCCCCCCCCCCCCCcc
Q psy11975 192 SSPPTHRSYGRSHHHSHHHRSHSHHHH 218 (786)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (786)
+.-|..-.+|..||| |||.-|+||||
T Consensus 777 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ 802 (802)
T 4hg6_A 777 SARPNTVAWGSNHHH-HHHKLHHHHHH 802 (802)
T ss_dssp ---------------------------
T ss_pred cCCCccccccccccc-cchhcccccCC
Confidence 334455567866665 45555555554
No 170
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=72.51 E-value=17 Score=38.81 Aligned_cols=129 Identities=19% Similarity=0.137 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHH----HHHHHHHHHhcC----------CCCEEEEeCCCCcCCccCH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDL----IYEHFISVADNS----------PIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~ee----Lv~YFraIAeAt----------dLPIiLYNiP~~TGv~LSp 591 (786)
++..++.++...++|||+|.+..+.-.. ++++. +..|+++|.+++ ++|++++-. |. .
T Consensus 196 ~~~~~~~~~~~i~aGad~i~i~D~~~~~--lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~----G~---~ 266 (367)
T 1r3s_A 196 TDALVPYLVGQVVAGAQALQLFESHAGH--LGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAK----DG---H 266 (367)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEETTGGG--SCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEET----TC---G
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcccc--CCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcC----Cc---H
Confidence 5777888888899999999988774322 34554 455666666544 389888853 22 2
Q ss_pred HHHHHHHhCC-CEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcchhhh------------hhc-cCCccccccccc---
Q psy11975 592 DTLVKLAHHE-NIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAGYLLS------------GLL-VGCAGGINALSA--- 653 (786)
Q Consensus 592 elL~rLAeiP-NVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~DelLL~------------aL~-~GAdG~Isg~aN--- 653 (786)
..+..|++.+ .++++=.. |+....+.+ ++++.+..+.|..++. .+. +|..|+|-..++
T Consensus 267 ~~l~~l~~~g~d~i~~d~~~dl~~a~~~~----g~~~~l~Gnldp~~L~gt~e~i~~~v~~~l~~~g~~g~I~~~ghgi~ 342 (367)
T 1r3s_A 267 FALEELAQAGYEVVGLDWTVAPKKARECV----GKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLY 342 (367)
T ss_dssp GGHHHHTTSSCSEEECCTTSCHHHHHHHH----CSSSEEEEEECGGGGGSCHHHHHHHHHHHHHHHCSSSEEEEESSCCC
T ss_pred HHHHHHHhcCCCEEEeCCCCCHHHHHHHc----CCCeEEEeCCChHHhcCCHHHHHHHHHHHHHHhCCCCeeecCCCCCC
Confidence 3556666653 68888444 888776654 3456666665643321 222 254577766654
Q ss_pred --cccHHHHHHHHHHH
Q psy11975 654 --VLGGPICELYDLAK 667 (786)
Q Consensus 654 --~~Pel~vaL~eA~~ 667 (786)
.-|+-+.+++++++
T Consensus 343 ~~~p~env~a~v~~v~ 358 (367)
T 1r3s_A 343 PDMDPEHVGAFVDAVH 358 (367)
T ss_dssp TTCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 23466666666664
No 171
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=72.44 E-value=5.7 Score=41.92 Aligned_cols=64 Identities=14% Similarity=0.155 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCccCHHHHHHHH
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDISVDTLVKLA 598 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~LSpelL~rLA 598 (786)
...+++++.|+..+++|||++++-.. + . + -.++|.++.++|++-.-. |...|.-|=...+.-|.
T Consensus 158 ~~a~~~i~rA~a~~eAGA~~ivlE~v----p---~-~---~a~~it~~l~iP~igIGaG~~~dgQvLV~~D~lG~~ 222 (275)
T 1o66_A 158 GKAQALLNDAKAHDDAGAAVVLMECV----L---A-E---LAKKVTETVSCPTIGIGAGADCDGQVLVMHDMLGIF 222 (275)
T ss_dssp -CHHHHHHHHHHHHHTTCSEEEEESC----C---H-H---HHHHHHHHCSSCEEEESSCSCSSEEEECHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEecC----C---H-H---HHHHHHHhCCCCEEEECCCCCCCcceeeHHhhcCCC
Confidence 45799999999999999999988642 1 2 2 256889999999998765 45556666555555554
No 172
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=72.07 E-value=0.88 Score=52.11 Aligned_cols=19 Identities=11% Similarity=0.045 Sum_probs=11.5
Q ss_pred CHHHHHHHHH----HHHHcCCCC
Q psy11975 725 KPGGAEKIKQ----VLTEAGFLV 743 (786)
Q Consensus 725 seeekaeL~~----~L~~lGll~ 743 (786)
+++.++.+++ +.+-+++..
T Consensus 480 ~~~~~~~v~eDi~~~~~~~~i~~ 502 (560)
T 3odm_A 480 DEEARQEYKEDMKYVNEILNLGL 502 (560)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHHHHHHHHHhCCCC
Confidence 4666666666 555567643
No 173
>2yjp_A Putative ABC transporter, periplasmic binding Pro amino acid; transport protein, solute-binding protein; 2.26A {Neisseria gonorrhoeae}
Probab=72.00 E-value=0.78 Score=46.14 Aligned_cols=11 Identities=0% Similarity=-0.242 Sum_probs=4.6
Q ss_pred cHHHHHHHHHH
Q psy11975 656 GGPICELYDLA 666 (786)
Q Consensus 656 Pel~vaL~eA~ 666 (786)
|++...+-+++
T Consensus 248 ~~l~~~l~~al 258 (291)
T 2yjp_A 248 ADLLNWVNGEI 258 (291)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444433
No 174
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=71.16 E-value=8 Score=40.48 Aligned_cols=123 Identities=16% Similarity=0.119 Sum_probs=81.8
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC-CCCCCCHHHHHHHHHHHHhcCC-CC--EEEEeCCCCcCCccCHHHHHH
Q psy11975 521 QKHTTTRATIDLTQKAAKAGANAALILCPYY-FQKKMTEDLIYEHFISVADNSP-IP--VIIYNNTFVTNIDISVDTLVK 596 (786)
Q Consensus 521 VGa~ST~EAIELAr~Ae~aGADAVmViPPyY-~kps~S~eeLv~YFraIAeAtd-LP--IiLYNiP~~TGv~LSpelL~r 596 (786)
.|...++.-+..++.|.+.|||.|-+..++- ++.+ +.+.+.+-.++|.++++ .| +||. ++ .|+.+.+.+
T Consensus 105 ~G~~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~lk~g-~~~~v~~eI~~v~~a~~~~~lKVIlE-----t~-~Lt~eei~~ 177 (260)
T 3r12_A 105 LGANETRTKAHEAIFAVESGADEIDMVINVGMLKAK-EWEYVYEDIRSVVESVKGKVVKVIIE-----TC-YLDTEEKIA 177 (260)
T ss_dssp TCCSCHHHHHHHHHHHHHHTCSEEEEECCHHHHHTT-CHHHHHHHHHHHHHHTTTSEEEEECC-----GG-GCCHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhccc-cHHHHHHHHHHHHHhcCCCcEEEEEe-----CC-CCCHHHHHH
Confidence 3456788888999999999999998887763 2333 47888889999998884 33 3333 22 578887766
Q ss_pred HHh---CCCEEEEEeC--------CHHHHHHHHhhcCCCC--EEEEeCCcc--hhhhhhccCCc--cccccc
Q psy11975 597 LAH---HENIRGVKDT--------DNIKLANMANQTKDLN--FSVFAGSAG--YLLSGLLVGCA--GGINAL 651 (786)
Q Consensus 597 LAe---iPNVVGIKDS--------Dl~ri~~ll~~~~~~d--f~Vf~G~De--lLL~aL~~GAd--G~Isg~ 651 (786)
.++ .-..-.||-+ .++.+.-+.+ ..+++ +..-.|--. .++..+.+|++ |..++.
T Consensus 178 A~~ia~eaGADfVKTSTGf~~~GAT~edV~lm~~-~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGtS~g~ 248 (260)
T 3r12_A 178 ACVISKLAGAHFVKTSTGFGTGGATAEDVHLMKW-IVGDEMGVKASGGIRTFEDAVKMIMYGADRIGTSSGV 248 (260)
T ss_dssp HHHHHHHTTCSEEECCCSSSSCCCCHHHHHHHHH-HHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEESCHH
T ss_pred HHHHHHHhCcCEEEcCCCCCCCCCCHHHHHHHHH-HhCCCceEEEeCCCCCHHHHHHHHHcCCceeecchHH
Confidence 653 3577788887 2344443433 23444 444555433 46777889998 765553
No 175
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=70.64 E-value=2.3 Score=36.58 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=43.6
Q ss_pred CCCCCCceEEEecc-cCCCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVK-GYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQ 412 (786)
Q Consensus 355 ~~f~vGDLVWaKvk-G~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsE 412 (786)
..+.+||++-||-. ---|.+|+|.......+.+.|+|-+.++ ...|..++|+++..
T Consensus 16 ~~~kvGd~C~A~ys~Dg~wYRA~I~~i~~~~~~~~V~fvDYGN--~e~V~~~~Lr~l~~ 72 (77)
T 3pnw_C 16 KMWKPGDECFALYWEDNKFYRAEVEALHSSGMTAVVKFIDYGN--YEEVLLSNIKPIQT 72 (77)
T ss_dssp TTCCTTCEEEEEETTTTEEEEEEEEEECTTSSEEEEEETTTCC--EEEEEGGGEECC--
T ss_pred CCCCcCCEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEcCCC--eEEEeHHHeEECCh
Confidence 46999999999973 3359999999876555789999988885 45578899999865
No 176
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=70.53 E-value=21 Score=34.48 Aligned_cols=99 Identities=14% Similarity=0.070 Sum_probs=57.7
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC--
Q psy11975 532 LTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-- 609 (786)
Q Consensus 532 LAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-- 609 (786)
.++.|.++|||++ +. |.| ..+++++.+ ..++|++. |+ .++..+.+..+. .+-.+|..
T Consensus 75 ~~~~a~~~Gad~i-v~-~~~------~~~~~~~~~----~~g~~vi~-------g~-~t~~e~~~a~~~-Gad~vk~~~~ 133 (205)
T 1wa3_A 75 QCRKAVESGAEFI-VS-PHL------DEEISQFCK----EKGVFYMP-------GV-MTPTELVKAMKL-GHTILKLFPG 133 (205)
T ss_dssp HHHHHHHHTCSEE-EC-SSC------CHHHHHHHH----HHTCEEEC-------EE-CSHHHHHHHHHT-TCCEEEETTH
T ss_pred HHHHHHHcCCCEE-Ec-CCC------CHHHHHHHH----HcCCcEEC-------Cc-CCHHHHHHHHHc-CCCEEEEcCc
Confidence 4677888999999 44 443 134555544 45788874 22 345555555443 34456654
Q ss_pred ---CHHHHHHHHhhcCCCCEEEE--eCCc-chhhhhhccCCccccccccc
Q psy11975 610 ---DNIKLANMANQTKDLNFSVF--AGSA-GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 610 ---Dl~ri~~ll~~~~~~df~Vf--~G~D-elLL~aL~~GAdG~Isg~aN 653 (786)
.+..+.++.. .. +++.|+ .|-. +.+...+.+|++|++.|.+.
T Consensus 134 ~~~g~~~~~~l~~-~~-~~~pvia~GGI~~~~~~~~~~~Ga~~v~vGs~i 181 (205)
T 1wa3_A 134 EVVGPQFVKAMKG-PF-PNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSAL 181 (205)
T ss_dssp HHHHHHHHHHHHT-TC-TTCEEEEBSSCCTTTHHHHHHHTCSCEEECHHH
T ss_pred cccCHHHHHHHHH-hC-CCCcEEEcCCCCHHHHHHHHHCCCCEEEECccc
Confidence 3455555544 22 244443 3333 34667788999999988653
No 177
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=70.20 E-value=47 Score=37.10 Aligned_cols=55 Identities=11% Similarity=-0.037 Sum_probs=34.0
Q ss_pred CeEEEeCCCCC-----HHHHHHHHHHHHHcCCCEEEEc--CCCCCC--CCCCHHHHHHHHHHHHh
Q psy11975 515 ADLLKPQKHTT-----TRATIDLTQKAAKAGANAALIL--CPYYFQ--KKMTEDLIYEHFISVAD 570 (786)
Q Consensus 515 VPVIaGVGa~S-----T~EAIELAr~Ae~aGADAVmVi--PPyY~k--ps~S~eeLv~YFraIAe 570 (786)
.+|++.++.+. .+|-++.++.+.+ +||++-+- .|..-. .....+.+.+-.++|-+
T Consensus 180 ~~vgvni~~~~~~~~~~~dy~~~a~~l~~-~aD~ieiNiscPnt~Glr~lq~~~~l~~il~~v~~ 243 (443)
T 1tv5_A 180 HIVGVSIGKNKDTVNIVDDLKYCINKIGR-YADYIAINVSSPNTPGLRDNQEAGKLKNIILSVKE 243 (443)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGG-GCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHH
T ss_pred ceEEEEecCcccchHHHHHHHHHHHHHhc-CCCEEEEeccCCCCcccccccCHHHHHHHHHHHHH
Confidence 57899999887 6777777777766 79999773 233210 00134555555555543
No 178
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=69.64 E-value=51 Score=35.83 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEE
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISVDTLVKLAHHENIRG 605 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVG 605 (786)
.+..++++.+.++|+|.|.+-.+.-+ .+.+.+..+.|.++. ++||+.=|+ .+++...++.+. .+-+
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~-----~~~~~e~I~~ir~~~~~~~Vi~G~V-------~T~e~A~~a~~a-GaD~ 165 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH-----AKYVGKTLKSLRQLLGSRCIMAGNV-------ATYAGADYLASC-GADI 165 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS-----SHHHHHHHHHHHHHHTTCEEEEEEE-------CSHHHHHHHHHT-TCSE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC-----cHhHHHHHHHHHHhcCCCeEEEcCc-------CCHHHHHHHHHc-CCCE
Confidence 67889999999999997777444311 244566677777665 799998543 467777777653 3444
Q ss_pred EEeC-----CH----------HHHHHHHhhcCCCCEEEE-eCC-c--chhhhhhccCCccccccccccccH
Q psy11975 606 VKDT-----DN----------IKLANMANQTKDLNFSVF-AGS-A--GYLLSGLLVGCAGGINALSAVLGG 657 (786)
Q Consensus 606 IKDS-----Dl----------~ri~~ll~~~~~~df~Vf-~G~-D--elLL~aL~~GAdG~Isg~aN~~Pe 657 (786)
||-+ .. ..+..+.+....-+ .|+ .|. . ..+..+|++||++++.|..-+..+
T Consensus 166 I~Vg~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~-PVIAdGGI~~~~di~kALa~GAd~V~iGr~f~~t~ 235 (361)
T 3r2g_A 166 IKAGIGGGSVCSTRIKTGFGVPMLTCIQDCSRADR-SIVADGGIKTSGDIVKALAFGADFVMIGGMLAGSA 235 (361)
T ss_dssp EEECCSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS-EEEEESCCCSHHHHHHHHHTTCSEEEESGGGTTBT
T ss_pred EEEcCCCCcCccccccCCccHHHHHHHHHHHHhCC-CEEEECCCCCHHHHHHHHHcCCCEEEEChHHhCCc
Confidence 4433 11 12222222111111 333 333 2 347788999999999988755443
No 179
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=69.61 E-value=8.6 Score=39.03 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=78.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCC---CCEEEEeCCCCcCCccCHHHHHHHH
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVADNSP---IPVIIYNNTFVTNIDISVDTLVKLA 598 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAeAtd---LPIiLYNiP~~TGv~LSpelL~rLA 598 (786)
..+++.-+..++.|.+.|||.|-+..++-. +.. +.+.+.+-..+|.++++ +|+|+ . ++ .++++.+.+.+
T Consensus 67 ~~~~~~k~~e~~~Ai~~GAdevd~vinig~~~~g-~~~~v~~ei~~v~~a~~~~~lkvIl-e----t~-~l~~e~i~~a~ 139 (220)
T 1ub3_A 67 YQEKEVKALEAALACARGADEVDMVLHLGRAKAG-DLDYLEAEVRAVREAVPQAVLKVIL-E----TG-YFSPEEIARLA 139 (220)
T ss_dssp CSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT-CHHHHHHHHHHHHHHSTTSEEEEEC-C----GG-GSCHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHcCCCEEEecccchhhhCC-CHHHHHHHHHHHHHHHcCCCceEEE-e----cC-CCCHHHHHHHH
Confidence 367888899999999999999988776543 222 58889999999999884 45544 2 22 26777766655
Q ss_pred h---CCCEEEEEeC--------CHHHHHHHHhhcCCC--CEEEEeCCc--chhhhhhccCCc--cccccc
Q psy11975 599 H---HENIRGVKDT--------DNIKLANMANQTKDL--NFSVFAGSA--GYLLSGLLVGCA--GGINAL 651 (786)
Q Consensus 599 e---iPNVVGIKDS--------Dl~ri~~ll~~~~~~--df~Vf~G~D--elLL~aL~~GAd--G~Isg~ 651 (786)
+ .-..-.||-+ ++..+..+.+ ..+. .+.+-.|-- +.++..+.+|++ |..++.
T Consensus 140 ~ia~eaGADfVKTsTGf~~~gat~~dv~~m~~-~vg~~v~VkaaGGirt~~~al~~i~aGa~RiG~S~g~ 208 (220)
T 1ub3_A 140 EAAIRGGADFLKTSTGFGPRGASLEDVALLVR-VAQGRAQVKAAGGIRDRETALRMLKAGASRLGTSSGV 208 (220)
T ss_dssp HHHHHHTCSEEECCCSSSSCCCCHHHHHHHHH-HHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEETTHH
T ss_pred HHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHH-hhCCCCeEEEECCCCCHHHHHHHHHCCCcccchhHHH
Confidence 3 2455667766 2344444433 1233 455555543 236677789998 776554
No 180
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=69.31 E-value=7.1 Score=43.65 Aligned_cols=52 Identities=12% Similarity=0.023 Sum_probs=44.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
..+++||+.++.+++ |||.|.+-++ .++ .+++.++.++|....+.+++.||.
T Consensus 263 ~gld~AI~Ra~AY~~-GAD~If~e~~---~~~--~eei~~f~~~v~~~~P~~~L~~~~ 314 (433)
T 3eol_A 263 NGIEPCIARAIAYAP-YCDLIWMETS---KPD--LAQARRFAEAVHKAHPGKLLAYNC 314 (433)
T ss_dssp CSHHHHHHHHHHHGG-GCSEEEECCS---SCC--HHHHHHHHHHHHHHSTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHh-cCCEEEEeCC---CCC--HHHHHHHHHHhcccCCCcccccCC
Confidence 569999999999988 9999999664 244 899999999998778888999986
No 181
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=68.77 E-value=14 Score=38.42 Aligned_cols=36 Identities=3% Similarity=-0.286 Sum_probs=28.3
Q ss_pred CCeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCC
Q psy11975 514 QADLLKPQKH-TTTRATIDLTQKAAKAGANAALILCP 549 (786)
Q Consensus 514 RVPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPP 549 (786)
++||++=+.. .+.++..++|+.++++|+|+|.+..-
T Consensus 158 ~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~ 194 (311)
T 1jub_A 158 TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNS 194 (311)
T ss_dssp CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCC
Confidence 4788874443 36778889999999999999988753
No 182
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=68.19 E-value=22 Score=37.38 Aligned_cols=144 Identities=13% Similarity=0.052 Sum_probs=86.6
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHHc-CCCEE---EEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAKA-GANAA---LILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~a-GADAV---mViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~ 588 (786)
+++++. -.|+.+.+|++..++.+.++ |-+-| ++--+.|..++ ..+.++-.+.+.+. ++-++-|..+
T Consensus 63 ~~~~lpntaG~~taeeAv~~a~lare~~gt~~iKlEvi~d~~~l~pD--~~~tv~aa~~L~k~-Gf~Vlpy~~~------ 133 (268)
T 2htm_A 63 GVRLLPNTAGARTAEEAVRLARLGRLLTGERWVKLEVIPDPTYLLPD--PLETLKAAERLIEE-DFLVLPYMGP------ 133 (268)
T ss_dssp TSEEEEBCTTCCSHHHHHHHHHHHHHHHCCSEEBCCCCSCTTTTCCC--HHHHHHHHHHHHHT-TCEECCEECS------
T ss_pred hhhccCcccCCCCHHHHHHHHHhhhHhcCcceeeeeeccCccccCcC--HHHHHHHHHHHHHC-CCEEeeccCC------
Confidence 666766 55667889999999998876 44543 23345555554 88888888887643 5555545433
Q ss_pred cCHHHHHHHHhC-CCEEEEEe--------C--CHHHHHHHHhhcCCCC-EEEEeCCc----chhhhhhccCCcccccccc
Q psy11975 589 ISVDTLVKLAHH-ENIRGVKD--------T--DNIKLANMANQTKDLN-FSVFAGSA----GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 589 LSpelL~rLAei-PNVVGIKD--------S--Dl~ri~~ll~~~~~~d-f~Vf~G~D----elLL~aL~~GAdG~Isg~a 652 (786)
++.+.++|++. +.++ +=. . +...+..+++. ..+ +.|+++.. +.+..++.+|++|++.+++
T Consensus 134 -D~~~ak~l~~~G~~aV-mPlg~pIGsG~Gi~~~~~L~~i~~~--~~~~vPVI~~GGI~tpsDAa~AmeLGAdgVlVgSA 209 (268)
T 2htm_A 134 -DLVLAKRLAALGTATV-MPLAAPIGSGWGVRTRALLELFARE--KASLPPVVVDAGLGLPSHAAEVMELGLDAVLVNTA 209 (268)
T ss_dssp -CHHHHHHHHHHTCSCB-EEBSSSTTTCCCSTTHHHHHHHHHT--TTTSSCBEEESCCCSHHHHHHHHHTTCCEEEESHH
T ss_pred -CHHHHHHHHhcCCCEE-EecCccCcCCcccCCHHHHHHHHHh--cCCCCeEEEeCCCCCHHHHHHHHHcCCCEEEEChH
Confidence 35777777652 3333 221 1 44555555541 234 45554332 3467789999999999987
Q ss_pred ccc---cH-HHHHHHHHHHcCC
Q psy11975 653 AVL---GG-PICELYDLAKAGK 670 (786)
Q Consensus 653 N~~---Pe-l~vaL~eA~~aGD 670 (786)
-+- |. ...++.+|+++|.
T Consensus 210 I~~a~dP~~ma~af~~Av~agr 231 (268)
T 2htm_A 210 IAEAQDPPAMAEAFRLAVEAGR 231 (268)
T ss_dssp HHTSSSHHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHHHH
Confidence 654 42 3344444555554
No 183
>2zvi_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; methionine salvage pathway, amino-acid biosynthesis, isomerase, magnesium, metal- binding; 2.30A {Bacillus subtilis}
Probab=67.78 E-value=15 Score=40.87 Aligned_cols=147 Identities=18% Similarity=0.136 Sum_probs=80.4
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhc--CCCCEEEEeCCCCcC--
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADN--SPIPVIIYNNTFVTN-- 586 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeA--tdLPIiLYNiP~~TG-- 586 (786)
++.+.--.++|++ +.+|.++.|+.|.++|+.++|+-.- ..+ +.-.+.+++. .++||.+.-. ..|
T Consensus 218 TGe~k~y~~NiT~-~~~em~~Ra~~a~e~G~~~~mvd~~---~~G------~~a~~~l~~~~~~~l~lh~HrA--~hga~ 285 (425)
T 2zvi_A 218 TGHKTLYAVNLTG-RTADLKDKARRAAELGADALLFNVF---AYG------LDVMQGLAEDPEIPVPIMAHPA--VSGAF 285 (425)
T ss_dssp HSCCCEEEEECCS-CGGGHHHHHHHHHHTTCSEEEECGG---GTC------HHHHHHHHHCTTCCSCEEECCT--TGGGG
T ss_pred hCCcceeeCcCCC-CHHHHHHHHHHHHHhCCCeEEEeee---ccC------hHHHHHHHHhCcCCCEEEeccC--Ccccc
Confidence 3333445679994 6999999999999999999998732 222 1223344443 4677666533 211
Q ss_pred -----CccCHHHH-HHHHh--------CCCEEEEEeC-CHHHHHHH---Hhhc--CCCCEEEEeCCcch-hhhhh--ccC
Q psy11975 587 -----IDISVDTL-VKLAH--------HENIRGVKDT-DNIKLANM---ANQT--KDLNFSVFAGSAGY-LLSGL--LVG 643 (786)
Q Consensus 587 -----v~LSpelL-~rLAe--------iPNVVGIKDS-Dl~ri~~l---l~~~--~~~df~Vf~G~Del-LL~aL--~~G 643 (786)
..++..++ .+|.+ .++++| |.. +.+.+..+ +++. ..+-+-|..|.-.. .++.+ ..|
T Consensus 286 ~r~~~~Gi~~~Vll~Kl~RLaGaD~ih~gt~~G-Kl~~~~~~~~~~~~~l~~~~~~k~v~PV~SGGih~~~~p~l~~~~G 364 (425)
T 2zvi_A 286 TSSPFYGFSHALLLGKLNRYCGADFSLFPSPYG-SVALPRADALAIHEECVREDAFNQTFAVPSAGIHPGMVPLLMRDFG 364 (425)
T ss_dssp TSCSSSEECHHHHTTHHHHHTTCSEEEECCSSS-SSCCCHHHHHHHHHHHHSCCSSCCCEEEECSSCCGGGHHHHHHHHT
T ss_pred cCCCCCCCcHHHHHhHHHHHhCCCccccCCcCC-CcCCCHHHHHHHHHHhcCCCCCCCceEeecCCcchhhHHHHHHHhC
Confidence 23666665 55542 366644 767 54444333 3311 13457777776432 22222 235
Q ss_pred Cccccccccccc--c-------HHHHHHHHHHHcCC
Q psy11975 644 CAGGINALSAVL--G-------GPICELYDLAKAGK 670 (786)
Q Consensus 644 AdG~Isg~aN~~--P-------el~vaL~eA~~aGD 670 (786)
-|-++...+.++ | ..+++-++|+.+|.
T Consensus 365 ~Dvvl~~GGG~~gHP~G~aaGa~A~R~A~eA~~~g~ 400 (425)
T 2zvi_A 365 IDHIINAGGGVHGHPNGAQGGGRAFRAIIDAVLEAQ 400 (425)
T ss_dssp TSBEEECGGGGGGSTTHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEcCccccCCCCCcHHHHHHHHHHHHHHHcCC
Confidence 443333333322 1 35666677777764
No 184
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=67.50 E-value=34 Score=36.56 Aligned_cols=100 Identities=13% Similarity=0.093 Sum_probs=68.3
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+=+ ++.+.++++++++..++.|+ .+-.|+. . ++.+++|.+++++||+.=. .-.+++
T Consensus 189 d~~l~vDan~~~~~~~a~~~~~~l~~~~i---~iE~P~~---~------~~~~~~l~~~~~iPI~~de------~i~~~~ 250 (379)
T 2rdx_A 189 GEKAMADANQGWRVDNAIRLARATRDLDY---ILEQPCR---S------YEECQQVRRVADQPMKLDE------CVTGLH 250 (379)
T ss_dssp TCEEEEECTTCSCHHHHHHHHHHTTTSCC---EEECCSS---S------HHHHHHHHTTCCSCEEECT------TCCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhCCe---EEeCCcC---C------HHHHHHHHhhCCCCEEEeC------CcCCHH
Confidence 56666633 45689999999999999987 3455542 3 5778888888999998643 335678
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+.++.+ .-.++.+|-. .+....++.+....-++.++.|
T Consensus 251 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 294 (379)
T 2rdx_A 251 MAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAE 294 (379)
T ss_dssp HHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 8888863 5789999999 5665555443222234555555
No 185
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=67.28 E-value=2.7 Score=38.34 Aligned_cols=59 Identities=14% Similarity=0.081 Sum_probs=46.7
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCCCC--CcEEEEEeCCCCCcccccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAPTQ--GRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~--g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
...|.+|+.|+..- |=-|++|+|++..... ..|.|.|-|-+.+---||..++|..+++.
T Consensus 20 ~~~f~vGekVl~~~-~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~Rl~k~t~e 80 (102)
T 2f5k_A 20 KPKFQEGERVLCFH-GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPESRVLKYVDT 80 (102)
T ss_dssp SCSCCTTCEEEEES-SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGGGEEESSHH
T ss_pred CcccCCCCEEEEEE-CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHhhcccCCHH
Confidence 35799999999987 5579999999855322 37999999998643455889999999875
No 186
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=67.12 E-value=34 Score=37.66 Aligned_cols=108 Identities=13% Similarity=0.072 Sum_probs=69.2
Q ss_pred CCeEEE--eCCCC-CHHHHHHHHHHHHHcCCCEEEEc--------CCCC--CC-C--------------CCCHHHHHHHH
Q psy11975 514 QADLLK--PQKHT-TTRATIDLTQKAAKAGANAALIL--------CPYY--FQ-K--------------KMTEDLIYEHF 565 (786)
Q Consensus 514 RVPVIa--GVGa~-ST~EAIELAr~Ae~aGADAVmVi--------PPyY--~k-p--------------s~S~eeLv~YF 565 (786)
.+-||+ |+.++ +.+.+.++++.|+++|||+|=.. .|+- |. . .++.++ ....
T Consensus 28 ~~~IIAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~-~~~L 106 (385)
T 1vli_A 28 PVFIIAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEW-ILPL 106 (385)
T ss_dssp CCEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGG-HHHH
T ss_pred CcEEEEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHH-HHHH
Confidence 467888 54453 89999999999999999999653 4542 21 1 112333 3555
Q ss_pred HHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHhhcCCCCEEEEeCCc
Q psy11975 566 ISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-----DNIKLANMANQTKDLNFSVFAGSA 633 (786)
Q Consensus 566 raIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-----Dl~ri~~ll~~~~~~df~Vf~G~D 633 (786)
.+.|+..+|+++- ..++.+.+..|.++ ++-.+|-. |+.-+..+.+ .+..+-+-.|..
T Consensus 107 ~~~~~~~Gi~~~s--------tpfD~~svd~l~~~-~vd~~KIgS~~~~N~pLL~~va~--~gKPViLStGma 168 (385)
T 1vli_A 107 LDYCREKQVIFLS--------TVCDEGSADLLQST-SPSAFKIASYEINHLPLLKYVAR--LNRPMIFSTAGA 168 (385)
T ss_dssp HHHHHHTTCEEEC--------BCCSHHHHHHHHTT-CCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTC
T ss_pred HHHHHHcCCcEEE--------ccCCHHHHHHHHhc-CCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCC
Confidence 5667777888762 23566777666654 45678888 5565555544 455677777775
No 187
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=66.75 E-value=11 Score=38.73 Aligned_cols=119 Identities=13% Similarity=0.092 Sum_probs=69.7
Q ss_pred CCeEEEeCCCCCH-------HHHHHHHHHHHHcCCCEEEEc-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCc
Q psy11975 514 QADLLKPQKHTTT-------RATIDLTQKAAKAGANAALIL-CPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVT 585 (786)
Q Consensus 514 RVPVIaGVGa~ST-------~EAIELAr~Ae~aGADAVmVi-PPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~T 585 (786)
+.+||+=+-..|. .+-+++|+.+++.||+++.++ -+.||..+ .++++.|.+++++||+.-+
T Consensus 45 ~~~~IaE~k~aSPskg~i~~~~p~~~A~~~~~~GA~~isvlt~~~~f~G~------~~~l~~i~~~v~lPvl~kd----- 113 (254)
T 1vc4_A 45 GLSVIAEVKRQSPSEGLIREVDPVEAALAYARGGARAVSVLTEPHRFGGS------LLDLKRVREAVDLPLLRKD----- 113 (254)
T ss_dssp SCEEEEEECSCCTTTCCCCSCCHHHHHHHHHHTTCSEEEEECCCSSSCCC------HHHHHHHHHHCCSCEEEES-----
T ss_pred CCcEEeeecCCCcCCCcCCCCCHHHHHHHHHHcCCCEEEEecchhhhccC------HHHHHHHHHhcCCCEEECC-----
Confidence 3678886543222 367899999999999999985 45666554 4688889999999997644
Q ss_pred CCccCHHHHHHHHhC--CCEEEEEeC-CHHHHHHHHhh--cCCCCEEEEeCCcchhhhhhccCCc
Q psy11975 586 NIDISVDTLVKLAHH--ENIRGVKDT-DNIKLANMANQ--TKDLNFSVFAGSAGYLLSGLLVGCA 645 (786)
Q Consensus 586 Gv~LSpelL~rLAei--PNVVGIKDS-Dl~ri~~ll~~--~~~~df~Vf~G~DelLL~aL~~GAd 645 (786)
.-+++..+.++... ..|.-+=.. + ..+.+++.. ..+-+..|-.-..+-+..++..|++
T Consensus 114 -fI~d~~qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl~~lvev~~~~E~~~a~~~gad 176 (254)
T 1vc4_A 114 -FVVDPFMLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGLEALVEVHTERELEIALEAGAE 176 (254)
T ss_dssp -CCCSHHHHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTCEEEEEECSHHHHHHHHHHTCS
T ss_pred -cCCCHHHHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCC
Confidence 34566566555443 333322222 4 444444431 1222222222222224456677764
No 188
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=66.05 E-value=21 Score=40.03 Aligned_cols=127 Identities=13% Similarity=0.048 Sum_probs=78.6
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LS 590 (786)
.+|+.+.++++.. .+..+.++.+.++|+|+|.+-...- ..+...+..+.|.+.+ ++||+.-++ .+
T Consensus 241 ~~rl~vga~vG~~--~~~~~~a~~~~~aG~d~v~i~~~~G-----~~~~~~~~i~~i~~~~~~~pvi~~~v-------~t 306 (514)
T 1jcn_A 241 QKQLLCGAAVGTR--EDDKYRLDLLTQAGVDVIVLDSSQG-----NSVYQIAMVHYIKQKYPHLQVIGGNV-------VT 306 (514)
T ss_dssp TSCBCCEEEECSS--TTHHHHHHHHHHTTCSEEEECCSCC-----CSHHHHHHHHHHHHHCTTCEEEEEEE-------CS
T ss_pred CCceeeeeEecCc--hhhHHHHHHHHHcCCCEEEeeccCC-----cchhHHHHHHHHHHhCCCCceEeccc-------ch
Confidence 4566676777653 3357788889999999999854321 1344567788888888 799987543 56
Q ss_pred HHHHHHHHh--CCCE-EEE----------E--eC-----CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCcc
Q psy11975 591 VDTLVKLAH--HENI-RGV----------K--DT-----DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAG 646 (786)
Q Consensus 591 pelL~rLAe--iPNV-VGI----------K--DS-----Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG 646 (786)
.+...++.+ ...| +|+ + .. .+..+.++.+. . ++.|+. |-. ..+..++++||++
T Consensus 307 ~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~-~--~ipVia~GGI~~~~di~kala~GAd~ 383 (514)
T 1jcn_A 307 AAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARR-F--GVPIIADGGIQTVGHVVKALALGAST 383 (514)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGG-G--TCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhh-C--CCCEEEECCCCCHHHHHHHHHcCCCe
Confidence 777777764 3332 111 0 00 23334444332 1 355554 442 3477889999999
Q ss_pred ccccccccc
Q psy11975 647 GINALSAVL 655 (786)
Q Consensus 647 ~Isg~aN~~ 655 (786)
++.|...+.
T Consensus 384 V~iG~~~l~ 392 (514)
T 1jcn_A 384 VMMGSLLAA 392 (514)
T ss_dssp EEESTTTTT
T ss_pred eeECHHHHc
Confidence 998886554
No 189
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=66.01 E-value=37 Score=35.49 Aligned_cols=106 Identities=6% Similarity=-0.003 Sum_probs=72.1
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcC--Ccc
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTN--IDI 589 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TG--v~L 589 (786)
|+-.+.+-+...+.++.++.++.+.+.|||+|=+--=++-... ..+.+.+..+.|-+.+ ++||++=.-+..-| ..+
T Consensus 38 g~p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~-~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~ 116 (276)
T 3o1n_A 38 GAPKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVT-TAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQAL 116 (276)
T ss_dssp SSCEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTT-CHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCC
T ss_pred CCcEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccC-cHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCC
Confidence 4555677999999999999999999999999988877665443 3477888888888877 79988766443322 245
Q ss_pred CHHHHHHHH----hC--CCEEEEEeC-CHHHHHHHHh
Q psy11975 590 SVDTLVKLA----HH--ENIRGVKDT-DNIKLANMAN 619 (786)
Q Consensus 590 SpelL~rLA----ei--PNVVGIKDS-Dl~ri~~ll~ 619 (786)
+.+...+|. +. +..+=|=.. +-+.+.++++
T Consensus 117 ~~~~~~~ll~~~l~~g~~dyIDvEl~~~~~~~~~l~~ 153 (276)
T 3o1n_A 117 TTGQYIDLNRAAVDSGLVDMIDLELFTGDDEVKATVG 153 (276)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEEGGGCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCCEEEEECcCCHHHHHHHHH
Confidence 655444443 43 445444444 5455555543
No 190
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=65.95 E-value=40 Score=36.59 Aligned_cols=107 Identities=11% Similarity=0.033 Sum_probs=70.7
Q ss_pred CeEEEeCCC---CCHHHHHHHHHHHHHcCCCEEEEc--------CCCC--CCC--------------CCCHHHHHHHHHH
Q psy11975 515 ADLLKPQKH---TTTRATIDLTQKAAKAGANAALIL--------CPYY--FQK--------------KMTEDLIYEHFIS 567 (786)
Q Consensus 515 VPVIaGVGa---~ST~EAIELAr~Ae~aGADAVmVi--------PPyY--~kp--------------s~S~eeLv~YFra 567 (786)
+-||+++|. .+.+.+.++++.|+++|||+|=.. .|+. |.. .++.++ .....+
T Consensus 20 ~~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~-~~~L~~ 98 (349)
T 2wqp_A 20 PLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEED-EIKLKE 98 (349)
T ss_dssp CEEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHH-HHHHHH
T ss_pred eEEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHH-HHHHHH
Confidence 668887763 589999999999999999999776 6654 431 123444 455666
Q ss_pred HHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHhhcCCCCEEEEeCCc
Q psy11975 568 VADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT-----DNIKLANMANQTKDLNFSVFAGSA 633 (786)
Q Consensus 568 IAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS-----Dl~ri~~ll~~~~~~df~Vf~G~D 633 (786)
.++..+|+++-= .++.+.+..|.++ ++-.+|-. |+.-+.++.+ .+..+-+-.|..
T Consensus 99 ~~~~~Gi~~~st--------~~d~~svd~l~~~-~v~~~KI~S~~~~n~~LL~~va~--~gkPviLstGma 158 (349)
T 2wqp_A 99 YVESKGMIFIST--------LFSRAAALRLQRM-DIPAYKIGSGECNNYPLIKLVAS--FGKPIILSTGMN 158 (349)
T ss_dssp HHHHTTCEEEEE--------ECSHHHHHHHHHH-TCSCEEECGGGTTCHHHHHHHHT--TCSCEEEECTTC
T ss_pred HHHHhCCeEEEe--------eCCHHHHHHHHhc-CCCEEEECcccccCHHHHHHHHh--cCCeEEEECCCC
Confidence 778888888743 2345555555443 34567877 5565555544 355677777764
No 191
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=65.57 E-value=6.9 Score=40.78 Aligned_cols=64 Identities=17% Similarity=0.138 Sum_probs=49.7
Q ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC----------------CCCCHHHHHHHHHHHHhcCCCCEEE--E
Q psy11975 518 LKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQ----------------KKMTEDLIYEHFISVADNSPIPVII--Y 579 (786)
Q Consensus 518 IaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~k----------------ps~S~eeLv~YFraIAeAtdLPIiL--Y 579 (786)
++-.|..+.+.+++.++..++. ||++.+--||--. .+++.+.+++..++|-+..++||++ |
T Consensus 21 ~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~~~~Pii~m~y 99 (271)
T 1ujp_A 21 YLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTY 99 (271)
T ss_dssp EEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCCSCEEEECC
T ss_pred EecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEEec
Confidence 3467889999999999999999 9999999998521 1123556677788888778899999 6
Q ss_pred eCC
Q psy11975 580 NNT 582 (786)
Q Consensus 580 NiP 582 (786)
.+|
T Consensus 100 ~n~ 102 (271)
T 1ujp_A 100 LNP 102 (271)
T ss_dssp HHH
T ss_pred CcH
Confidence 555
No 192
>3b9f_I Protein C inhibitor; michaelis complex, acute phase, blood coagulation, cleavage of basic residues, disease mutation; HET: NAG FUC SGN IDS; 1.60A {Homo sapiens} PDB: 2ol2_A*
Probab=65.49 E-value=1.3 Score=48.37 Aligned_cols=17 Identities=53% Similarity=0.941 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCcccc
Q psy11975 204 HHHSHHHRSHSHHHHQS 220 (786)
Q Consensus 204 ~~~~~~~~~~~~~~~~~ 220 (786)
|||+|||++|+..|-|.
T Consensus 3 ~~~~~~~~~~~~~~~~~ 19 (395)
T 3b9f_I 3 HHHHHHHHHHSSGHIDD 19 (395)
T ss_dssp -----------------
T ss_pred ccccccccccCCCCcCC
Confidence 44444443344444333
No 193
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=65.45 E-value=14 Score=39.27 Aligned_cols=99 Identities=5% Similarity=-0.027 Sum_probs=64.2
Q ss_pred CCeEEEeCC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC---CCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 514 QADLLKPQK-------HTTTRATIDLTQKAAKAGANAALILCPYYFQ---KKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGVG-------a~ST~EAIELAr~Ae~aGADAVmViPPyY~k---ps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
.+||.+=++ +.+.++++++++.++++|+|++-+....+.. +. .+..-.++.+.|.+++++||+.
T Consensus 209 ~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~~~~ir~~~~iPVi~----- 282 (338)
T 1z41_A 209 DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINV-FPGYQVSFAEKIREQADMATGA----- 282 (338)
T ss_dssp CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHHCCEEEE-----
T ss_pred CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCC-CccchHHHHHHHHHHCCCCEEE-----
Confidence 456665432 4578999999999999999999998754321 11 0111256667777777899874
Q ss_pred CcCCccCHHHHHHHHhCC--CEEEEEeC---CHHHHHHHHh
Q psy11975 584 VTNIDISVDTLVKLAHHE--NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 584 ~TGv~LSpelL~rLAeiP--NVVGIKDS---Dl~ri~~ll~ 619 (786)
.|--.+++...++.+.. .+|++=-. |.+-+.++.+
T Consensus 283 -~Ggi~s~~~a~~~l~~G~aD~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 283 -VGMITDGSMAEEILQNGRADLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp -CSSCCSHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred -ECCCCCHHHHHHHHHcCCceEEeecHHHHhCchHHHHHHc
Confidence 34334788888887543 45555433 6555555554
No 194
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=65.42 E-value=6.4 Score=39.96 Aligned_cols=55 Identities=15% Similarity=0.134 Sum_probs=41.8
Q ss_pred CCeEEE--eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHh
Q psy11975 514 QADLLK--PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVAD 570 (786)
Q Consensus 514 RVPVIa--GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAe 570 (786)
++||++ |++..+.+++++.++.+.++||++|++..-.+..+. ..+..+.|.++..
T Consensus 202 ~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg~~i~~~~~--~~~~~~~l~~~~~ 258 (273)
T 2qjg_A 202 PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVGRNIFQHDD--VVGITRAVCKIVH 258 (273)
T ss_dssp SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECCHHHHTSSS--HHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEeeHHhhCCCC--HHHHHHHHHHHHh
Confidence 478877 555556899999999999999999999887776655 6666655555543
No 195
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=65.33 E-value=45 Score=34.35 Aligned_cols=85 Identities=6% Similarity=0.081 Sum_probs=62.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCC---
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNI--- 587 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv--- 587 (786)
.|+-.|++-+.+.+.+++++.++.+.+.|||+|=+--=++-... +.+.+.+....+-+.+ ++|+++=.-+..-|-
T Consensus 17 ~~~p~Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~-~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~ 95 (257)
T 2yr1_A 17 GTEPCICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAID-DQERVLATANGLRNIAGEIPILFTIRSEREGGQPI 95 (257)
T ss_dssp SSSCEEEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTT-CHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCC
T ss_pred CCCcEEEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccC-cHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCC
Confidence 45556778999999999999999999999999988877664432 3567777777777777 799877665444333
Q ss_pred ccCHHHHHHH
Q psy11975 588 DISVDTLVKL 597 (786)
Q Consensus 588 ~LSpelL~rL 597 (786)
..+.+...+|
T Consensus 96 ~~~~~~~~~l 105 (257)
T 2yr1_A 96 PLNEAEVRRL 105 (257)
T ss_dssp SSCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 4566654444
No 196
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=65.07 E-value=6.4 Score=41.63 Aligned_cols=63 Identities=14% Similarity=0.092 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCccCHHHHHHHH
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDISVDTLVKLA 598 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~LSpelL~rLA 598 (786)
..+++++.|+..+++|||++++-.. + . + -.++|.++.++|++-.-. |...|.-|=...+.-|.
T Consensus 177 ~a~~~i~rA~a~~eAGA~~ivlE~v----p---~-~---~a~~it~~l~iP~igIGaG~~~dgQvLV~~D~lG~~ 240 (281)
T 1oy0_A 177 AAEQTIADAIAVAEAGAFAVVMEMV----P---A-E---LATQITGKLTIPTVGIGAGPNCDGQVLVWQDMAGFS 240 (281)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESC----C---H-H---HHHHHHHHCSSCEEEESSCSCSSEEEECHHHHTTCS
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecC----C---H-H---HHHHHHHhCCCCEEEeCCCCCCCcceeeHhhhcCCC
Confidence 4589999999999999999988642 1 2 2 256889999999998765 45556666555555554
No 197
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=64.94 E-value=12 Score=41.47 Aligned_cols=116 Identities=13% Similarity=0.151 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCHHHHHHHHhC--CCE
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISVDTLVKLAHH--ENI 603 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSpelL~rLAei--PNV 603 (786)
...++.++.+.++|+|++++..- .. ..+.+.+..+.+.+.. ++|++. |.-.+.+...++.+. ..|
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a--~g---~~~~~~~~i~~l~~~~p~~pvi~-------G~v~t~~~a~~~~~~Gad~I 299 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTA--HG---HSAGVLRKIAEIRAHFPNRTLIA-------GNIATAEGARALYDAGVDVV 299 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCS--CT---TCHHHHHHHHHHHHHCSSSCEEE-------EEECSHHHHHHHHHTTCSEE
T ss_pred hhHHHHHHHHHHcCCCeEEEeee--cC---cchhHHHHHHHHHHHCCCCcEeC-------CCccCHHHHHHHHHcCCCEE
Confidence 45677888899999999998862 11 2456778888999888 799982 334556777777653 222
Q ss_pred -EEE----------E---eC-CHHHHHHHHhhcCCCCEEEEe-CC---cchhhhhhccCCcccccccccc
Q psy11975 604 -RGV----------K---DT-DNIKLANMANQTKDLNFSVFA-GS---AGYLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 604 -VGI----------K---DS-Dl~ri~~ll~~~~~~df~Vf~-G~---DelLL~aL~~GAdG~Isg~aN~ 654 (786)
+|+ . .. ++..+.++.......++.|+. |. ...+..++++|+++++.|.+.+
T Consensus 300 ~vg~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~~~ipvia~GGi~~~~di~kal~~GA~~v~vG~~~~ 369 (491)
T 1zfj_A 300 KVGIGPGSICTTRVVAGVGVPQVTAIYDAAAVAREYGKTIIADGGIKYSGDIVKALAAGGNAVMLGSMFA 369 (491)
T ss_dssp EECSSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred EECccCCcceEEeeecCCCCCcHHHHHHHHHHHhhcCCCEEeeCCCCCHHHHHHHHHcCCcceeeCHHhh
Confidence 111 0 01 334444443311113455554 32 2346778899999999988755
No 198
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=64.89 E-value=34 Score=32.50 Aligned_cols=143 Identities=14% Similarity=0.128 Sum_probs=71.4
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCC-----------EEEEeCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIP-----------VIIYNNT 582 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLP-----------IiLYNiP 582 (786)
.+|++++.+. .+.+..+.+.||+++++-|-.+. .+++++..........+- +.++..-
T Consensus 55 ~i~vi~~~~~------~~~~~~~~~~Ga~~~l~kp~~~~-----~~~l~~~i~~~~~~~~~~~~~d~~~~~~~~~v~~~~ 123 (237)
T 3cwo_X 55 KIIVCSAMGQ------QAMVIEAIKAGAKDFIVNTAAVE-----NPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYS 123 (237)
T ss_dssp CEEEECCSST------HHHHHHHHHTTCCEEEESHHHHH-----CTHHHHHHHHHHTGGGEEEEEEEEESSSCEEEEETT
T ss_pred CEEEEECCCC------HHHHHHHHHCCHHheEeCCcccC-----hHHHHHHHHHHhCCCceEEEeeecccCCcEEEEEeC
Confidence 3566665544 56677888899999886541121 223444333333221111 1122111
Q ss_pred CCcCCccCH-HHHHHHHh--CCCEEEEE--eC------CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCccccc
Q psy11975 583 FVTNIDISV-DTLVKLAH--HENIRGVK--DT------DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGIN 649 (786)
Q Consensus 583 ~~TGv~LSp-elL~rLAe--iPNVVGIK--DS------Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~Is 649 (786)
+.+-...++ +.+.+++. .+.|.-.- .+ +...+.++.. ...-.|-..+|.. +.+..++..|++|++.
T Consensus 124 g~~~~~~~~~~~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~-~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~v 202 (237)
T 3cwo_X 124 GKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRP-LTTLPIIASGGAGKMEHFLEAFLAGADAALA 202 (237)
T ss_dssp TTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGG-GCCSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CccccccCHHHHHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHH-hcCCCEEecCCCCCHHHHHHHHHcCcHHHhh
Confidence 111111233 45555553 44343322 22 3455555544 2344455555654 3567778899999988
Q ss_pred cccc-cccHHHHHHHHHHHc
Q psy11975 650 ALSA-VLGGPICELYDLAKA 668 (786)
Q Consensus 650 g~aN-~~Pel~vaL~eA~~a 668 (786)
|.+- .-|..+.++.+.+++
T Consensus 203 g~a~~~~~~~~~~~~~~l~~ 222 (237)
T 3cwo_X 203 ASVFHFREIDVRELKEYLKK 222 (237)
T ss_dssp SHHHHTTSSCHHHHHHHHHT
T ss_pred hHHHHcCCCCHHHHHHHHHH
Confidence 8754 234444444444443
No 199
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=64.78 E-value=50 Score=35.00 Aligned_cols=122 Identities=12% Similarity=0.169 Sum_probs=79.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCCCCEE--EEeCCCCcCCccCHHHHHHHH
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVADNSPIPVI--IYNNTFVTNIDISVDTLVKLA 598 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAeAtdLPIi--LYNiP~~TGv~LSpelL~rLA 598 (786)
|...++.-+..++.|.+.|||.|-++.++-. +-. +.+.+.+-.++|.++++-|++ ++. ++ .|+.+.+.+.+
T Consensus 121 G~~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~lk~g-~~~~v~~eI~~V~~a~~~~~lKVIlE----t~-~Lt~eei~~A~ 194 (288)
T 3oa3_A 121 GTYSTDQKVSEAKRAMQNGASELDMVMNYPWLSEK-RYTDVFQDIRAVRLAAKDAILKVILE----TS-QLTADEIIAGC 194 (288)
T ss_dssp SCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT-CHHHHHHHHHHHHHHTTTSEEEEECC----GG-GCCHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEEeehhhhcCC-cHHHHHHHHHHHHHHhcCCCceEEEE----CC-CCCHHHHHHHH
Confidence 5678888899999999999999988776532 222 478899999999999865532 333 34 36777766554
Q ss_pred h---CCCEEEEEeC-----------CHHHHHHHHhhcCCCCEE--EEeCCc--chhhhhhccCCc--ccccc
Q psy11975 599 H---HENIRGVKDT-----------DNIKLANMANQTKDLNFS--VFAGSA--GYLLSGLLVGCA--GGINA 650 (786)
Q Consensus 599 e---iPNVVGIKDS-----------Dl~ri~~ll~~~~~~df~--Vf~G~D--elLL~aL~~GAd--G~Isg 650 (786)
+ .-..-.||-+ |+..++++++ ..+.++. .-.|-- +.++..+.+|++ |..++
T Consensus 195 ~ia~eaGADfVKTSTGf~~~GAT~edv~lmr~~v~-~~g~~v~VKAAGGIrt~edAl~mi~aGA~RiGtS~g 265 (288)
T 3oa3_A 195 VLSSLAGADYVKTSTGFNGPGASIENVSLMSAVCD-SLQSETRVKASGGIRTIEDCVKMVRAGAERLGASAG 265 (288)
T ss_dssp HHHHHTTCSEEECCCSSSSCCCCHHHHHHHHHHHH-HSSSCCEEEEESSCCSHHHHHHHHHTTCSEEEESCH
T ss_pred HHHHHcCCCEEEcCCCCCCCCCCHHHHHHHHHHHH-HhCCCceEEEeCCCCCHHHHHHHHHcCCceeehhhH
Confidence 3 3566777776 2333444442 1134444 444443 246777889998 65544
No 200
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=64.38 E-value=10 Score=39.07 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=53.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhc---CCCCEEEEeCCCCcCCccCHHHHHHH
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADN---SPIPVIIYNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeA---tdLPIiLYNiP~~TGv~LSpelL~rL 597 (786)
|..+.++++++++.|.+.|.+.+.+++-+... ...+.+.+.++|++|.+. ..++|-|+- + .-+.+.++....|
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~--G-~Ev~~~~~~~~~l 91 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLP--G-QEIRIYGEVEQDL 91 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEEC--C-CEEECCTTHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEec--C-eEEecchhHHHHH
Confidence 56789999999999999999999988765321 111478899998888765 356766652 2 2334667777776
Q ss_pred Hh
Q psy11975 598 AH 599 (786)
Q Consensus 598 Ae 599 (786)
.+
T Consensus 92 ~~ 93 (262)
T 3qy7_A 92 AK 93 (262)
T ss_dssp HT
T ss_pred hc
Confidence 53
No 201
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=64.34 E-value=13 Score=39.73 Aligned_cols=100 Identities=7% Similarity=-0.009 Sum_probs=63.4
Q ss_pred CCeEEEeCC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCEEEEeCCCC
Q psy11975 514 QADLLKPQK-------HTTTRATIDLTQKAAKAGANAALILCPYYFQKK--MTEDLIYEHFISVADNSPIPVIIYNNTFV 584 (786)
Q Consensus 514 RVPVIaGVG-------a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps--~S~eeLv~YFraIAeAtdLPIiLYNiP~~ 584 (786)
.+||.+=++ +.+.++.+++++..+++|+|++-+....+.... ..+..-.++.+.|.+++++||+.=
T Consensus 209 ~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~----- 283 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV----- 283 (340)
T ss_dssp CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE-----
T ss_pred CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEee-----
Confidence 456665333 356899999999999999999999754332100 001123567778888889998752
Q ss_pred cCCccCHHHHHHHHhCC--CEEEEEeC---CHHHHHHHHh
Q psy11975 585 TNIDISVDTLVKLAHHE--NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 585 TGv~LSpelL~rLAeiP--NVVGIKDS---Dl~ri~~ll~ 619 (786)
|.--+++...++.+.. ..|++=-. |++-+.++.+
T Consensus 284 -GgI~s~e~a~~~L~~G~aD~V~iGR~~lanPdl~~ki~~ 322 (340)
T 3gr7_A 284 -GLITSGWQAEEILQNGRADLVFLGRELLRNPYWPYAAAR 322 (340)
T ss_dssp -SSCCCHHHHHHHHHTTSCSEEEECHHHHHCTTHHHHHHH
T ss_pred -CCCCCHHHHHHHHHCCCeeEEEecHHHHhCchHHHHHHH
Confidence 3334788888887543 34444333 5555555554
No 202
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=63.76 E-value=1.5 Score=49.39 Aligned_cols=15 Identities=0% Similarity=0.020 Sum_probs=9.8
Q ss_pred CCHHHHHHHHHHHHH
Q psy11975 724 LKPGGAEKIKQVLTE 738 (786)
Q Consensus 724 LseeekaeL~~~L~~ 738 (786)
.+++..++|++.+++
T Consensus 529 ~~~~~~~~l~~~l~~ 543 (580)
T 3etc_A 529 PSDSLKNELQDHVKN 543 (580)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 455566777777765
No 203
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=63.39 E-value=30 Score=34.08 Aligned_cols=76 Identities=8% Similarity=-0.004 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHh--CC
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAH--HE 601 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAe--iP 601 (786)
.+.++..+.++.|+++||+.|.+.|. .+ ..+...++|+..++.|.+-|.|..+ ...+++.+.+|.+ .|
T Consensus 88 ~~~~~~~~~i~~A~~lGa~~v~~~~~--------~~-~~~~l~~~a~~~gv~l~~En~~~~~-~~~~~~~~~~ll~~~~~ 157 (262)
T 3p6l_A 88 EKSSDWEKMFKFAKAMDLEFITCEPA--------LS-DWDLVEKLSKQYNIKISVHNHPQPS-DYWKPENLLKAISGRSQ 157 (262)
T ss_dssp SSTTHHHHHHHHHHHTTCSEEEECCC--------GG-GHHHHHHHHHHHTCEEEEECCSSSS-SSSSHHHHHHHHTTSCT
T ss_pred ccHHHHHHHHHHHHHcCCCEEEecCC--------HH-HHHHHHHHHHHhCCEEEEEeCCCcc-ccCCHHHHHHHHHhCCC
Confidence 45667778888899999999988642 22 2355566677779999999998632 2237888888884 57
Q ss_pred CEEEEEeC
Q psy11975 602 NIRGVKDT 609 (786)
Q Consensus 602 NVVGIKDS 609 (786)
+|.-.=|+
T Consensus 158 ~~g~~~D~ 165 (262)
T 3p6l_A 158 SLGSCSDV 165 (262)
T ss_dssp TEEEEEEH
T ss_pred ceEEEech
Confidence 77555555
No 204
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=63.36 E-value=81 Score=34.31 Aligned_cols=114 Identities=11% Similarity=0.064 Sum_probs=72.5
Q ss_pred CCCCeEEEe-CCCCCHHHHHHHHHHHHHcCC----CEEEEcCCCCCCCCCC------------------HHHHHHHHHHH
Q psy11975 512 EWQADLLKP-QKHTTTRATIDLTQKAAKAGA----NAALILCPYYFQKKMT------------------EDLIYEHFISV 568 (786)
Q Consensus 512 aGRVPVIaG-VGa~ST~EAIELAr~Ae~aGA----DAVmViPPyY~kps~S------------------~eeLv~YFraI 568 (786)
++|+-||+| ++-.+.+.+++.|+..+++|. +.+.++==|++||..+ .++| ...+++
T Consensus 48 d~rllVIaGPCSied~eq~leyA~~Lk~~~~~~~d~l~~vmR~y~~KPRTs~g~kGL~nDP~ld~s~~i~~GL-~~~R~l 126 (346)
T 3tqk_A 48 DDRVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKDILIIMRVYFEKPRTTIGWKGFINDPDLDNSYNINKGL-RLARNL 126 (346)
T ss_dssp SCSEEEEEECSSCSCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSCSCCCTTTCTTSSSCCCHHHHH-HHHHHH
T ss_pred CCCEEEEEecCccCCHHHHHHHHHHHHHHHhhhcccceEEeeecccCCCCCcCccccccCCCCCCCccHHHHH-HHHHHH
Confidence 457889998 777899999999999988874 5667777788888533 4443 444432
Q ss_pred ---HhcCCCCEEEEeC-C---CC----------cCCccCHHHHHHHH-hCCCEEEEEeC---CHHHHHHHHhhcCCCCE
Q psy11975 569 ---ADNSPIPVIIYNN-T---FV----------TNIDISVDTLVKLA-HHENIRGVKDT---DNIKLANMANQTKDLNF 626 (786)
Q Consensus 569 ---AeAtdLPIiLYNi-P---~~----------TGv~LSpelL~rLA-eiPNVVGIKDS---Dl~ri~~ll~~~~~~df 626 (786)
.+.+++|++-==. | .. .-..+.-.++.+++ .+.-=||+|.. ++..+...+.....+.-
T Consensus 127 l~~~~e~GLpiatE~ld~~~~qyv~dlvs~~aIGARt~enq~hre~asg~s~PVg~Kngt~gti~~ai~Ai~aa~~pH~ 205 (346)
T 3tqk_A 127 LSDLTNMGLPCATEFLDVITPQYFAELITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSATYPHH 205 (346)
T ss_dssp HHHHHHTTCCEEEECCSSSGGGGTGGGCSEEEECGGGTTCHHHHHHHTTCSSEEEEECCTTCCSHHHHHHHHHHTSCCE
T ss_pred HHHHHhcCCCEEEEecCcCCHHHHHHHhheeeeCcccccCHHHHHHhcCCCCceEEeCCCCCchHHHhhHHHHHhCCce
Confidence 3567899863211 1 10 11122335678887 68889999998 66555544443334443
No 205
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=63.35 E-value=65 Score=34.81 Aligned_cols=130 Identities=12% Similarity=0.026 Sum_probs=74.0
Q ss_pred CeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcC--CCCC-----------CC---------------C--C-------
Q psy11975 515 ADLLKPQKH-TTTRATIDLTQKAAKAGANAALILC--PYYF-----------QK---------------K--M------- 556 (786)
Q Consensus 515 VPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmViP--PyY~-----------kp---------------s--~------- 556 (786)
.|+.+++.. .+.+...++++.|+++|++++.+.. |... .| + +
T Consensus 133 ~~~~~QLy~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p~~~~~~~~~~~~~~~g~~l~~~~~~~ 212 (368)
T 2nli_A 133 GPRWFQIYMAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYPFGMPIVQRYLRGTAEGMSLNNIYGAS 212 (368)
T ss_dssp CCEEEEECCBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CCSCCHHHHHHHTTSGGGC-----CTTB
T ss_pred CCEEEEEeccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCcchhhhhhcccccCCCCchHHhhhhcc
Confidence 456666544 5667788999999999999987654 2200 00 0 0
Q ss_pred CHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEEE-------EeC---CHHHHHHHHhhcCCCC
Q psy11975 557 TEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRGV-------KDT---DNIKLANMANQTKDLN 625 (786)
Q Consensus 557 S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVGI-------KDS---Dl~ri~~ll~~~~~~d 625 (786)
+.+-..+..+.|.+.+++||++=.+ ++++...++.+. -..+.+ .+. ++..+.++.+. .+++
T Consensus 213 d~~~~~~~i~~lr~~~~~PvivK~v-------~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~-v~~~ 284 (368)
T 2nli_A 213 KQKISPRDIEEIAGHSGLPVFVKGI-------QHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAER-VNKR 284 (368)
T ss_dssp CSBCCHHHHHHHHHHSSSCEEEEEE-------CSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHH-HTTS
T ss_pred CchhhHHHHHHHHHHcCCCEEEEcC-------CCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHH-hCCC
Confidence 0011123356666677888887643 456776666643 122223 122 34445555442 2334
Q ss_pred EEEEeCCc----chhhhhhccCCcccccccc
Q psy11975 626 FSVFAGSA----GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 626 f~Vf~G~D----elLL~aL~~GAdG~Isg~a 652 (786)
+.|+.-.+ ...+.+|++||++++.|..
T Consensus 285 ipVia~GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 285 VPIVFDSGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp SCEEECSSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred CeEEEECCCCCHHHHHHHHHcCCCEEEECHH
Confidence 55443332 2366788899999988864
No 206
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=63.31 E-value=34 Score=37.12 Aligned_cols=81 Identities=16% Similarity=0.114 Sum_probs=51.1
Q ss_pred CCCeEEEeCCC------CCHHHHHHHHHHHHHcCCCEEEEcCCCC---CCC-CCC-HH-HHHHHHHHHHhcCCCCEEEEe
Q psy11975 513 WQADLLKPQKH------TTTRATIDLTQKAAKAGANAALILCPYY---FQK-KMT-ED-LIYEHFISVADNSPIPVIIYN 580 (786)
Q Consensus 513 GRVPVIaGVGa------~ST~EAIELAr~Ae~aGADAVmViPPyY---~kp-s~S-~e-eLv~YFraIAeAtdLPIiLYN 580 (786)
..+|+++++++ .+.+++.+.++.+ ++||+.+--... ..+ +.. .. .+.+..+.|.+.+++||++=.
T Consensus 118 p~~~~~anlg~~ql~~~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~vPVivK~ 194 (368)
T 3vkj_A 118 PTIPIIANLGMPQLVKGYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELSVPIIVKE 194 (368)
T ss_dssp SSSCEEEEEEGGGGGTTCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCSSCEEEEC
T ss_pred cCcceecCcCeeecCCCCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcCCCEEEEe
Confidence 45789988777 3455544444443 677776653221 011 100 11 478889999999999999975
Q ss_pred CCCCcCCccCHHHHHHHHhC
Q psy11975 581 NTFVTNIDISVDTLVKLAHH 600 (786)
Q Consensus 581 iP~~TGv~LSpelL~rLAei 600 (786)
.|..++++...++.+.
T Consensus 195 ----vG~g~s~~~A~~l~~a 210 (368)
T 3vkj_A 195 ----SGNGISMETAKLLYSY 210 (368)
T ss_dssp ----SSSCCCHHHHHHHHHT
T ss_pred ----CCCCCCHHHHHHHHhC
Confidence 4556788888887754
No 207
>2es4_D Lipase chaperone; protein-protein complex, steric chaperone, triacylglycerol hydrolase, all alpha helix protein, A/B hydrolase fold; 1.85A {Burkholderia glumae} SCOP: a.137.15.1
Probab=63.17 E-value=1.5 Score=47.35 Aligned_cols=21 Identities=19% Similarity=0.260 Sum_probs=12.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCC
Q psy11975 723 ALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 723 pLseeekaeL~~~L~~lGll~ 743 (786)
.|++++++.-...|+.--+-.
T Consensus 297 ~Ls~~~kq~qI~~LR~q~F~~ 317 (332)
T 2es4_D 297 GLAPQDRDARIAQLRQQTFTA 317 (332)
T ss_dssp CCCHHHHHHHHHHHHHHHCCS
T ss_pred CCCHHHHHHHHHHHHHHhCCC
Confidence 456777766555566554533
No 208
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=62.40 E-value=25 Score=37.92 Aligned_cols=96 Identities=15% Similarity=0.092 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHH----HHHHHHHHHhcCC-------CCEEEEeCCCCcCCccCHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDL----IYEHFISVADNSP-------IPVIIYNNTFVTNIDISVDTL 594 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~ee----Lv~YFraIAeAtd-------LPIiLYNiP~~TGv~LSpelL 594 (786)
++.++++++...++|||+|++.-+.-.. ++++. +.-|+++|.+++. +|++++.. |. ...+
T Consensus 196 ~~~~~~y~~~qi~aGad~i~ifDs~~~~--Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~----g~---~~~l 266 (368)
T 4exq_A 196 AQAVAAYLNAQIEAGAQAVMIFDTWGGA--LADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK----GG---GLWL 266 (368)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEETTGGG--SCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET----TC---GGGH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccc--CCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC----Cc---HHHH
Confidence 5666777888889999999986654322 22333 6778899998762 68876653 22 1456
Q ss_pred HHHHhC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcc
Q psy11975 595 VKLAHH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAG 634 (786)
Q Consensus 595 ~rLAei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~De 634 (786)
..+++. ..++++=.. |+....+.+ ++++.+..+.|.
T Consensus 267 ~~l~~~g~d~i~~d~~~dl~~ak~~~----g~~~~l~Gnldp 304 (368)
T 4exq_A 267 EDLAATGVDAVGLDWTVNLGRARERV----AGRVALQGNLDP 304 (368)
T ss_dssp HHHHTSSCSEEECCTTSCHHHHHHHH----TTSSEEEEEECG
T ss_pred HHHHHhCCCEEeeCCCCCHHHHHHHh----CCCEEEEECCCH
Confidence 667665 478888444 888776554 345666655554
No 209
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=62.30 E-value=18 Score=38.33 Aligned_cols=129 Identities=15% Similarity=0.136 Sum_probs=74.5
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHH----HHHHHHHHHhcC-----CCCEEEEeCCCCcCCccCHHHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDL----IYEHFISVADNS-----PIPVIIYNNTFVTNIDISVDTLVK 596 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~ee----Lv~YFraIAeAt-----dLPIiLYNiP~~TGv~LSpelL~r 596 (786)
++..++.++...++|||+|++.-+.-.. ++++. ...|+++|.+.. ++|++ +.+ ..++ ..+..
T Consensus 192 ~~~~~~~~~~~~~aGad~iqi~D~~~~~--lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~i-h~c-~g~~-----~~l~~ 262 (353)
T 1j93_A 192 ATSMAKYIRYQADSGAQAVQIFDSWATE--LSPVDFEEFSLPYLKQIVDSVKLTHPNLPLI-LYA-SGSG-----GLLER 262 (353)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECGGGGG--SCHHHHHHHTHHHHHHHHHHHHHHSTTCCEE-EEC-SSCT-----TTGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCccccc--CCHHHHHHHhHHHHHHHHHHHHHhCCCCCEE-EEC-CChH-----HHHHH
Confidence 5677888888889999999998875222 23544 356667777665 68875 444 2222 23444
Q ss_pred HHhC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcchhhh------------hhc-cCCccccccccccc-----c
Q psy11975 597 LAHH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAGYLLS------------GLL-VGCAGGINALSAVL-----G 656 (786)
Q Consensus 597 LAei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~DelLL~------------aL~-~GAdG~Isg~aN~~-----P 656 (786)
|++. -.++++=.. |+....+.+ ++++.+..+.|..++. .+. .|..|+|-+.++-+ |
T Consensus 263 l~~~g~d~~~~d~~~d~~~~~~~~----g~~~~l~Gnldp~~l~~~~e~i~~~v~~~l~~~~~~g~I~~~g~gi~~~~~~ 338 (353)
T 1j93_A 263 LPLTGVDVVSLDWTVDMADGRRRL----GPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGKHILNLGHGIKVGTPE 338 (353)
T ss_dssp GGGGCCSEEECCTTSCHHHHHHHT----CSSSEEECCBCGGGGGSCHHHHHHHHHHHHHHHCSSSEEBCBSSCCCTTCCH
T ss_pred HHhcCCCEEEeCCCCCHHHHHHHc----CCCeEEEecCCHHHHcCCHHHHHHHHHHHHHHhCCCCEEEeCCCCCCCCCCH
Confidence 4443 357787444 887765543 3456666555543221 222 25457776666532 3
Q ss_pred HHHHHHHHHHH
Q psy11975 657 GPICELYDLAK 667 (786)
Q Consensus 657 el~vaL~eA~~ 667 (786)
+-+.+++++++
T Consensus 339 enl~a~ve~v~ 349 (353)
T 1j93_A 339 ENFAHFFEIAK 349 (353)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44555555544
No 210
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=62.30 E-value=11 Score=40.70 Aligned_cols=85 Identities=11% Similarity=-0.014 Sum_probs=58.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC-
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE- 601 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP- 601 (786)
.+.++++++++.++++|+|++-+..+.+.. +.. + .++.+.|.+++++||+.= .| ++++...++.+..
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~---~~~~~~v~~~~~iPvi~~-----Gg--it~~~a~~~l~~g~ 316 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPY-S---EAFRQKVRERFHGVIIGA-----GA--YTAEKAEDLIGKGL 316 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC-C---HHHHHHHHHHCCSEEEEE-----SS--CCHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcc-c---HHHHHHHHHHCCCCEEEE-----CC--cCHHHHHHHHHCCC
Confidence 367789999999999999999998764422 111 1 356778888889998753 23 3799999888654
Q ss_pred -CEEEEEeC---CHHHHHHHHh
Q psy11975 602 -NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 602 -NVVGIKDS---Dl~ri~~ll~ 619 (786)
.+|++=-. |..-+.++.+
T Consensus 317 aD~V~~gR~~l~~P~~~~~~~~ 338 (364)
T 1vyr_A 317 IDAVAFGRDYIANPDLVARLQK 338 (364)
T ss_dssp CSEEEESHHHHHCTTHHHHHHH
T ss_pred ccEEEECHHHHhChhHHHHHHc
Confidence 34444333 6555555554
No 211
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=62.15 E-value=56 Score=33.21 Aligned_cols=120 Identities=8% Similarity=0.009 Sum_probs=74.3
Q ss_pred eEEEeCCC--CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCC--cC---Cc
Q psy11975 516 DLLKPQKH--TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFV--TN---ID 588 (786)
Q Consensus 516 PVIaGVGa--~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~--TG---v~ 588 (786)
-|++|.+. ....|..++.+.|.++|-+.++.+- +.+++ +.+...+-.|+-||.... || ..
T Consensus 91 ~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg--------e~~e~-----~~~~~~~~~iIayep~waiGtG~~v~t 157 (225)
T 1hg3_A 91 GTLLNHSENRMILADLEAAIRRAEEVGLMTMVCSN--------NPAVS-----AAVAALNPDYVAVEPPELIGTGIPVSK 157 (225)
T ss_dssp EEEESCGGGCCBHHHHHHHHHHHHHHTCEEEEEES--------SHHHH-----HHHHTTCCSEEEECCTTTTTTSCCTTT
T ss_pred EEEECcchhcCCHHHHHHHHHHHHHCCCEEEEEeC--------CHHHH-----HHHhcCCCCEEEEeChhhhccCCCCCC
Confidence 47777777 7778888899999999999888873 13333 223344556999998765 45 45
Q ss_pred cCHHHHHHHHhCCCEEEEEeCCHHHHHHHHhhcCCCCEEEEeCCcc----hhhhhhccCCccccccccccccHHHHHHHH
Q psy11975 589 ISVDTLVKLAHHENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAG----YLLSGLLVGCAGGINALSAVLGGPICELYD 664 (786)
Q Consensus 589 LSpelL~rLAeiPNVVGIKDSDl~ri~~ll~~~~~~df~Vf~G~De----lLL~aL~~GAdG~Isg~aN~~Pel~vaL~e 664 (786)
.+++.+.+. .++++.. .+++.++.|..- ..-.....|+||+.-|.+.+-++-+.++++
T Consensus 158 ~~~d~~~~~-----------------~~~ir~~-~~~~~ilyggsV~~~n~~~~~~~~~vDG~LVG~a~l~a~~~~~~i~ 219 (225)
T 1hg3_A 158 AKPEVITNT-----------------VELVKKV-NPEVKVLCGAGISTGEDVKKAIELGTVGVLLASGVTKAKDPEKAIW 219 (225)
T ss_dssp SCTHHHHHH-----------------HHHHHHH-CTTSEEEEESSCCSHHHHHHHHHTTCSEEEESHHHHTCSSHHHHHH
T ss_pred CChhHHHHH-----------------HHHHHhc-cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEeCHHHHCCcCHHHHHH
Confidence 566655443 2233322 234555555431 122234679999998887776665555555
Q ss_pred HH
Q psy11975 665 LA 666 (786)
Q Consensus 665 A~ 666 (786)
.+
T Consensus 220 ~l 221 (225)
T 1hg3_A 220 DL 221 (225)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 212
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=62.12 E-value=4.5 Score=33.43 Aligned_cols=52 Identities=15% Similarity=-0.004 Sum_probs=42.0
Q ss_pred CCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccc
Q psy11975 356 GLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSL 410 (786)
Q Consensus 356 ~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpF 410 (786)
+|.+||=|.++-.-==..||.|+.-.....++.|+|+... -.|+..++|++.
T Consensus 3 ~f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~s---~~W~~~kdi~~~ 54 (58)
T 4hcz_A 3 RLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDS---QFLVLWKDISPA 54 (58)
T ss_dssp SCCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTSC---EEEEEGGGEEEC
T ss_pred ccccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCCC---eEEEEhHHcccc
Confidence 6899999999987777889999997766678999988765 345677888865
No 213
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=62.04 E-value=17 Score=35.60 Aligned_cols=84 Identities=17% Similarity=0.148 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEE
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGV 606 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGI 606 (786)
.+.++.++.+++.|||++.+.......+. .....+..++|.+.+++||++-. .-.+++.+.++.+.. +-+|
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~~~~--~~~~~~~i~~i~~~~~ipvi~~g------~i~~~~~~~~~~~~G-ad~V 103 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAAPEG--RATFIDSVKRVAEAVSIPVLVGG------GVRSLEDATTLFRAG-ADKV 103 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCCTTT--HHHHHHHHHHHHHHCSSCEEEES------SCCSHHHHHHHHHHT-CSEE
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCccccC--CcccHHHHHHHHHhcCCCEEEEC------CCCCHHHHHHHHHcC-CCEE
Confidence 36789999999999999988755432222 44567788899998999998743 234567776666432 2233
Q ss_pred EeC-----CHHHHHHHHh
Q psy11975 607 KDT-----DNIKLANMAN 619 (786)
Q Consensus 607 KDS-----Dl~ri~~ll~ 619 (786)
-.. +...+.++.+
T Consensus 104 ~i~~~~~~~~~~~~~~~~ 121 (253)
T 1h5y_A 104 SVNTAAVRNPQLVALLAR 121 (253)
T ss_dssp EESHHHHHCTHHHHHHHH
T ss_pred EEChHHhhCcHHHHHHHH
Confidence 322 5555555544
No 214
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=61.95 E-value=46 Score=35.29 Aligned_cols=127 Identities=15% Similarity=0.085 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHH----HHHHHHHHHhcC---CCCEEEEeCCCCcCCccCHHHHHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDL----IYEHFISVADNS---PIPVIIYNNTFVTNIDISVDTLVKLA 598 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~ee----Lv~YFraIAeAt---dLPIiLYNiP~~TGv~LSpelL~rLA 598 (786)
++..++.++...++|||+|.+.-+.-.. ++++. +..|+++|.+.. ++|++++-. |. ...+..|+
T Consensus 192 ~~~~~~~~~~~~~aGad~i~i~D~~~~~--lsp~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~----G~---~~~l~~l~ 262 (359)
T 2inf_A 192 ADMIIVYVKAQIKAGAKAIQIFDSWVGA--LNQADYRTYIKPVMNRIFSELAKENVPLIMFGV----GA---SHLAGDWH 262 (359)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECTTGGG--SCHHHHHHHTHHHHHHHHHHHGGGCSCEEEECT----TC---GGGHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccc--CCHHHHHHHhHHHHHHHHHHHHHcCCcEEEEcC----Cc---HHHHHHHH
Confidence 5778888999999999999998884322 34644 456677777766 688887742 32 22556666
Q ss_pred hC-CCEEEEEeC-CHHHHHHHHhhcCCCCEEEEeCCcchhhh------------hhccCC--ccccccccccc-----cH
Q psy11975 599 HH-ENIRGVKDT-DNIKLANMANQTKDLNFSVFAGSAGYLLS------------GLLVGC--AGGINALSAVL-----GG 657 (786)
Q Consensus 599 ei-PNVVGIKDS-Dl~ri~~ll~~~~~~df~Vf~G~DelLL~------------aL~~GA--dG~Isg~aN~~-----Pe 657 (786)
+. -.++++-.. |+..+.+ . ++++.+..+.|..++. .+..|. .|+|-+.++-+ |+
T Consensus 263 ~~g~d~~~~d~~~d~~~~~~----~-g~~~~l~Gnldp~~l~~t~e~I~~~v~~~l~~~~~~~g~Il~~gcgi~~~~~~e 337 (359)
T 2inf_A 263 DLPLDVVGLDWRLGIDEARS----K-GITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPE 337 (359)
T ss_dssp TSSCSEEECCTTSCHHHHHH----T-TCCSEEECCBCGGGGGSCHHHHHHHHHHHHHHHTTSSCEEBCBSSCCCTTSCHH
T ss_pred HhCCCEEEeCCCCCHHHHHH----c-CCCEEEEecCChHHhcCCHHHHHHHHHHHHHhCCCCCCeEEeCCCCCCCCcCHH
Confidence 54 368888444 7665433 3 4456666555543221 222232 47787766532 34
Q ss_pred HHHHHHHHH
Q psy11975 658 PICELYDLA 666 (786)
Q Consensus 658 l~vaL~eA~ 666 (786)
-+.++++++
T Consensus 338 nl~a~ve~v 346 (359)
T 2inf_A 338 VLKKLTAFV 346 (359)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 444555444
No 215
>2oar_A Large-conductance mechanosensitive channel; stretch activated ION channel mechanosensitive, membrane protein; 3.50A {Mycobacterium tuberculosis H37RA} SCOP: f.16.1.1
Probab=61.87 E-value=1.6 Score=43.16 Aligned_cols=12 Identities=17% Similarity=0.329 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHc
Q psy11975 728 GAEKIKQVLTEA 739 (786)
Q Consensus 728 ekaeL~~~L~~l 739 (786)
-..+|+.+|++-
T Consensus 136 LL~EIRDlLk~~ 147 (174)
T 2oar_A 136 LLTEIRDLLAQT 147 (174)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 356677777663
No 216
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=61.85 E-value=53 Score=34.11 Aligned_cols=107 Identities=14% Similarity=0.139 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEcC-CCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC--CCE
Q psy11975 527 RATIDLTQKAAKAGANAALILC-PYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH--ENI 603 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViP-PyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei--PNV 603 (786)
.+..++|+.+++.||+++.++. +.|| .+-.+|.++|.+++++||+.-+ .-+++..+.+..+. +.|
T Consensus 72 ~~p~~~A~~y~~~GA~~isvltd~~~f------~Gs~~~l~~ir~~v~lPvl~kd------fiid~~qv~~A~~~GAD~V 139 (272)
T 3qja_A 72 ADPAKLAQAYQDGGARIVSVVTEQRRF------QGSLDDLDAVRASVSIPVLRKD------FVVQPYQIHEARAHGADML 139 (272)
T ss_dssp -CHHHHHHHHHHTTCSEEEEECCGGGH------HHHHHHHHHHHHHCSSCEEEES------CCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecChhhc------CCCHHHHHHHHHhCCCCEEECc------cccCHHHHHHHHHcCCCEE
Confidence 3668899999999999998875 3443 3346788999989999999654 34667655554433 333
Q ss_pred EEE-EeCCHHHHHHHHhh--cCCCCEEEEeCCcchhhhhhccCCc
Q psy11975 604 RGV-KDTDNIKLANMANQ--TKDLNFSVFAGSAGYLLSGLLVGCA 645 (786)
Q Consensus 604 VGI-KDSDl~ri~~ll~~--~~~~df~Vf~G~DelLL~aL~~GAd 645 (786)
.=+ .+-+...+.+++.. ..+-++-+-.-..+-+..++..|++
T Consensus 140 lLi~a~l~~~~l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~Gad 184 (272)
T 3qja_A 140 LLIVAALEQSVLVSMLDRTESLGMTALVEVHTEQEADRALKAGAK 184 (272)
T ss_dssp EEEGGGSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTCS
T ss_pred EEecccCCHHHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHCCCC
Confidence 322 22144444433321 1232222223222334456677776
No 217
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=61.55 E-value=1.8e+02 Score=31.42 Aligned_cols=125 Identities=11% Similarity=0.067 Sum_probs=68.9
Q ss_pred HHHHHHcCCCEEEEcCCCC---C-CCCCCHHHHHHHHHHHHhcC---C--CCEEEEeCCCCcCCccCHHHHHHHH----h
Q psy11975 533 TQKAAKAGANAALILCPYY---F-QKKMTEDLIYEHFISVADNS---P--IPVIIYNNTFVTNIDISVDTLVKLA----H 599 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY---~-kps~S~eeLv~YFraIAeAt---d--LPIiLYNiP~~TGv~LSpelL~rLA----e 599 (786)
++.|.++|+|.|-+.-+.- . +...+.+++++-+.++.+.+ + +.+.++=. .....+++.+.+++ +
T Consensus 80 i~~a~~~g~~~v~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~e---d~~~~~~~~~~~~~~~~~~ 156 (382)
T 2ztj_A 80 AKVAVETGVQGIDLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAE---DTFRSEEQDLLAVYEAVAP 156 (382)
T ss_dssp HHHHHHTTCSEEEEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEET---TTTTSCHHHHHHHHHHHGG
T ss_pred HHHHHHcCCCEEEEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEE---eCCCCCHHHHHHHHHHHHH
Confidence 4667788999887654321 1 12234666666555555443 4 55544421 34456677766665 2
Q ss_pred CCCEEEEEeC----CHHHHHHHHhh---c--CCCCEEEEeCCcc-----hhhhhhccCC---cccccccc----ccccHH
Q psy11975 600 HENIRGVKDT----DNIKLANMANQ---T--KDLNFSVFAGSAG-----YLLSGLLVGC---AGGINALS----AVLGGP 658 (786)
Q Consensus 600 iPNVVGIKDS----Dl~ri~~ll~~---~--~~~df~Vf~G~De-----lLL~aL~~GA---dG~Isg~a----N~~Pel 658 (786)
....+.|+|+ .+..+.++++. . .+-.+.+=+=+|- ..+.++.+|+ +|.+.|++ |..-+.
T Consensus 157 ~a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlGeraGN~~lE~ 236 (382)
T 2ztj_A 157 YVDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIGERNGITPLGG 236 (382)
T ss_dssp GCSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHH
T ss_pred hcCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEccccccccccchhHHH
Confidence 3789999999 56555555432 2 2223444432331 2456778888 45555544 554455
Q ss_pred HH
Q psy11975 659 IC 660 (786)
Q Consensus 659 ~v 660 (786)
++
T Consensus 237 vv 238 (382)
T 2ztj_A 237 FL 238 (382)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 218
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=61.48 E-value=14 Score=42.48 Aligned_cols=90 Identities=11% Similarity=-0.004 Sum_probs=58.5
Q ss_pred ccCCCCeEEEeC-------CCCCHHHHHHHHHHHHHcCCCEEEEcC----CCCC---CCCCCHHHHHHHHHHHHhcCCCC
Q psy11975 510 EREWQADLLKPQ-------KHTTTRATIDLTQKAAKAGANAALILC----PYYF---QKKMTEDLIYEHFISVADNSPIP 575 (786)
Q Consensus 510 evaGRVPVIaGV-------Ga~ST~EAIELAr~Ae~aGADAVmViP----PyY~---kps~S~eeLv~YFraIAeAtdLP 575 (786)
+++.++||.+=+ ++.+.++++++++.++++|+|++-+.. +.+. +.. ......++.+.|.+++++|
T Consensus 204 ~vG~~~~v~vrls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~~~~iP 282 (671)
T 1ps9_A 204 RVGNDFIIIYRLSMLDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPV-PRGAFSWVTRKLKGHVSLP 282 (671)
T ss_dssp HHCSSSEEEEEEEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTS-CTTTTHHHHHHHTTSCSSC
T ss_pred HcCCCceEEEEECccccCCCCCCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccC-CcchHHHHHHHHHHhcCce
Confidence 344567776622 356889999999999999999998741 1110 000 0112356788888888999
Q ss_pred EEEEeCCCCcCCccCHHHHHHHHhCC--CEEEE
Q psy11975 576 VIIYNNTFVTNIDISVDTLVKLAHHE--NIRGV 606 (786)
Q Consensus 576 IiLYNiP~~TGv~LSpelL~rLAeiP--NVVGI 606 (786)
|+. .|.-.+++...++.+.. .++++
T Consensus 283 vi~------~Ggi~~~~~a~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 283 LVT------TNRINDPQVADDILSRGDADMVSM 309 (671)
T ss_dssp EEE------CSSCCSHHHHHHHHHTTSCSEEEE
T ss_pred EEE------eCCCCCHHHHHHHHHcCCCCEEEe
Confidence 875 34344788888887543 34444
No 219
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=61.43 E-value=56 Score=31.38 Aligned_cols=123 Identities=15% Similarity=0.071 Sum_probs=64.8
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCcc-CHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDI-SVD 592 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~L-Spe 592 (786)
.+||+++..-.+..+. .++.|.++|||++.+.+- .+ ++.+.+..+ .+...++++.+--. .+ +++
T Consensus 53 ~~~i~~~l~~~di~~~--~~~~a~~~Gad~v~vh~~----~~--~~~~~~~~~-~~~~~g~~~gv~~~------s~~~p~ 117 (207)
T 3ajx_A 53 DKIVFADMKTMDAGEL--EADIAFKAGADLVTVLGS----AD--DSTIAGAVK-AAQAHNKGVVVDLI------GIEDKA 117 (207)
T ss_dssp TSEEEEEEEECSCHHH--HHHHHHHTTCSEEEEETT----SC--HHHHHHHHH-HHHHHTCEEEEECT------TCSSHH
T ss_pred CCeEEEEEEecCccHH--HHHHHHhCCCCEEEEecc----CC--hHHHHHHHH-HHHHcCCceEEEEe------cCCChH
Confidence 4688876654452222 457888999999987642 11 344433333 33333555433110 11 344
Q ss_pred H-HHHHHhC-CCEEEEEeC--------CH--HHHHHHHhhcCCCCEEEEeCCc-chhhhhhccCCccccccccc
Q psy11975 593 T-LVKLAHH-ENIRGVKDT--------DN--IKLANMANQTKDLNFSVFAGSA-GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 593 l-L~rLAei-PNVVGIKDS--------Dl--~ri~~ll~~~~~~df~Vf~G~D-elLL~aL~~GAdG~Isg~aN 653 (786)
. +.++.+. ...+++.-+ +. .+++++.. . .-.+.+-.|-. +..-.++.+|++|++.|.+-
T Consensus 118 ~~~~~~~~~g~d~v~~~~~~~~~~~g~~~~~~~i~~~~~-~-~~pi~v~GGI~~~~~~~~~~aGad~vvvGsaI 189 (207)
T 3ajx_A 118 TRAQEVRALGAKFVEMHAGLDEQAKPGFDLNGLLAAGEK-A-RVPFSVAGGVKVATIPAVQKAGAEVAVAGGAI 189 (207)
T ss_dssp HHHHHHHHTTCSEEEEECCHHHHTSTTCCTHHHHHHHHH-H-TSCEEEESSCCGGGHHHHHHTTCSEEEESHHH
T ss_pred HHHHHHHHhCCCEEEEEecccccccCCCchHHHHHHhhC-C-CCCEEEECCcCHHHHHHHHHcCCCEEEEeeec
Confidence 4 4444432 344444322 22 33444432 1 23455666664 34666789999999988653
No 220
>2yln_A Putative ABC transporter, periplasmic binding Pro amino acid; transport protein, solute-BIND protein; HET: CYS GOL; 1.12A {Neisseria gonorrhoeae} PDB: 3zsf_A
Probab=61.24 E-value=1.7 Score=43.52 Aligned_cols=6 Identities=0% Similarity=0.014 Sum_probs=3.0
Q ss_pred CEEEEe
Q psy11975 625 NFSVFA 630 (786)
Q Consensus 625 df~Vf~ 630 (786)
++.+..
T Consensus 225 ~l~~~~ 230 (283)
T 2yln_A 225 GVKIVW 230 (283)
T ss_dssp SEEEEE
T ss_pred cEEEcc
Confidence 365543
No 221
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=61.17 E-value=1e+02 Score=33.08 Aligned_cols=129 Identities=15% Similarity=0.205 Sum_probs=74.9
Q ss_pred eEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEcCC--CC----------------------CC-------CC--------
Q psy11975 516 DLLKPQK-HTTTRATIDLTQKAAKAGANAALILCP--YY----------------------FQ-------KK-------- 555 (786)
Q Consensus 516 PVIaGVG-a~ST~EAIELAr~Ae~aGADAVmViPP--yY----------------------~k-------ps-------- 555 (786)
+..+... ..+.+...++++.|+++|++++.+..- .. .. ..
T Consensus 124 ~~~~QLy~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~g~~~~~~ 203 (370)
T 1gox_A 124 IRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGKMDKANDSGLSSY 203 (370)
T ss_dssp CEEEEECCBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC---------HHHH
T ss_pred CceEEEecCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhccccccCccHHHH
Confidence 4555542 346677889999999999999887642 21 00 00
Q ss_pred ----CCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEEEeC------------CHHHHHHHHh
Q psy11975 556 ----MTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGVKDT------------DNIKLANMAN 619 (786)
Q Consensus 556 ----~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGIKDS------------Dl~ri~~ll~ 619 (786)
.+..-..+..+.|.+.+++||++=.. ++++...++.+. .+-+|+-+ ++..+.++.+
T Consensus 204 v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~-------~~~e~a~~a~~~-Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~ 275 (370)
T 1gox_A 204 VAGQIDRSLSWKDVAWLQTITSLPILVKGV-------ITAEDARLAVQH-GAAGIIVSNHGARQLDYVPATIMALEEVVK 275 (370)
T ss_dssp HHHTBCTTCCHHHHHHHHHHCCSCEEEECC-------CSHHHHHHHHHT-TCSEEEECCGGGTSSTTCCCHHHHHHHHHH
T ss_pred HHhhcCccchHHHHHHHHHHhCCCEEEEec-------CCHHHHHHHHHc-CCCEEEECCCCCccCCCcccHHHHHHHHHH
Confidence 00011224567777778899886432 456777666654 23334332 2344445544
Q ss_pred hcCCCCEEEEe-CC-c--chhhhhhccCCccccccccc
Q psy11975 620 QTKDLNFSVFA-GS-A--GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 620 ~~~~~df~Vf~-G~-D--elLL~aL~~GAdG~Isg~aN 653 (786)
..++++.|+. |. . ..+..++.+|+++++.|...
T Consensus 276 -~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iGr~~ 312 (370)
T 1gox_A 276 -AAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIGRPV 312 (370)
T ss_dssp -HTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred -HhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeecHHH
Confidence 2333455443 32 1 24677888999999888743
No 222
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=60.97 E-value=24 Score=35.01 Aligned_cols=78 Identities=14% Similarity=0.031 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC----CCCEEEEeCCCCcCCc-cCHHHHHHHHh-
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS----PIPVIIYNNTFVTNID-ISVDTLVKLAH- 599 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt----dLPIiLYNiP~~TGv~-LSpelL~rLAe- 599 (786)
.+...+.++.|+++||..+.+.+.++ + .+.+++.++++++.+ ++.|.+=|.|.....- -+++.+.+|.+
T Consensus 87 ~~~~~~~i~~a~~lGa~~vv~h~g~~---~--~~~~~~~l~~l~~~a~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 161 (270)
T 3aam_A 87 VASLADDLEKAALLGVEYVVVHPGSG---R--PERVKEGALKALRLAGVRSRPVLLVENTAGGGEKVGARFEELAWLVAD 161 (270)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCBS---C--HHHHHHHHHHHHHHHTCCSSSEEEEECCCCCTTBSCCSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCC---C--HHHHHHHHHHHHHhhcccCCCEEEEecCCCCCCccCCCHHHHHHHHHh
Confidence 34445667788899999998877664 3 577888888887653 6889899987532222 28999999984
Q ss_pred CCCEEEEEeC
Q psy11975 600 HENIRGVKDT 609 (786)
Q Consensus 600 iPNVVGIKDS 609 (786)
+ +|--+=|+
T Consensus 162 v-~vg~~lD~ 170 (270)
T 3aam_A 162 T-PLQVCLDT 170 (270)
T ss_dssp S-SCEEEEEH
T ss_pred C-CEEEEEeh
Confidence 6 44333333
No 223
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=60.93 E-value=44 Score=35.76 Aligned_cols=104 Identities=11% Similarity=0.102 Sum_probs=69.8
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.+++.+-+ ++.+.++++++++..++.|++.+ -.|+ .+. -++.+++|.+++++||+.=. .-.+++
T Consensus 190 d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----~~~~~~~l~~~~~iPI~~de------~i~~~~ 254 (384)
T 2pgw_A 190 DARLRLDANEGWSVHDAINMCRKLEKYDIEFI--EQPT--VSW-----SIPAMAHVREKVGIPIVADQ------AAFTLY 254 (384)
T ss_dssp TCEEEEECTTCCCHHHHHHHHHHHGGGCCSEE--ECCS--CTT-----CHHHHHHHHHHCSSCEEEST------TCCSHH
T ss_pred CcEEEEecCCCCCHHHHHHHHHHHHhcCCCEE--eCCC--Chh-----hHHHHHHHHhhCCCCEEEeC------CcCCHH
Confidence 45555532 45689999999999999999865 3554 221 25677888888899988543 345788
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-.++.+|-. .+....++.+....-++.++.+.
T Consensus 255 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 255 DVYEICRQRAADMICIGPREIGGIQPMMKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp HHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHcCCCCEEEEcchhhCCHHHHHHHHHHHHHCCCeEeecc
Confidence 9998874 4689999998 66555554332222345555553
No 224
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=60.92 E-value=30 Score=37.37 Aligned_cols=128 Identities=12% Similarity=0.064 Sum_probs=72.2
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC-CC---CCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCcc
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILC-PY---YFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDI 589 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViP-Py---Y~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~L 589 (786)
++++++.++... ..+.++.+.++|+|++.+-. +. |..+ +........+.+.+++||++ |.-.
T Consensus 155 g~~v~~~v~~~~---~~e~a~~~~~agad~i~i~~~~~~~~~~~~----~~~~~~i~~l~~~~~~pvi~-------ggi~ 220 (393)
T 2qr6_A 155 GEIVAVRVSPQN---VREIAPIVIKAGADLLVIQGTLISAEHVNT----GGEALNLKEFIGSLDVPVIA-------GGVN 220 (393)
T ss_dssp TSCCEEEECTTT---HHHHHHHHHHTTCSEEEEECSSCCSSCCCC---------CHHHHHHHCSSCEEE-------ECCC
T ss_pred CCeEEEEeCCcc---HHHHHHHHHHCCCCEEEEeCCccccccCCC----cccHHHHHHHHHhcCCCEEE-------CCcC
Confidence 356666665543 45667777789999987642 21 2222 11222356677778999998 2346
Q ss_pred CHHHHHHHHhCCCEEEEEeC---------------CHHHHHHHHhhc------CCC-CEEEEeCCc----chhhhhhccC
Q psy11975 590 SVDTLVKLAHHENIRGVKDT---------------DNIKLANMANQT------KDL-NFSVFAGSA----GYLLSGLLVG 643 (786)
Q Consensus 590 SpelL~rLAeiPNVVGIKDS---------------Dl~ri~~ll~~~------~~~-df~Vf~G~D----elLL~aL~~G 643 (786)
+++...++.+. .+-+|+-+ .+..+.++.+.. .+. ++.|+.-.. ..+..+|++|
T Consensus 221 t~e~a~~~~~~-Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalG 299 (393)
T 2qr6_A 221 DYTTALHMMRT-GAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACG 299 (393)
T ss_dssp SHHHHHHHHTT-TCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHT
T ss_pred CHHHHHHHHHc-CCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcC
Confidence 78887777653 22333322 223333333310 222 266554222 2467788999
Q ss_pred Ccccccccccccc
Q psy11975 644 CAGGINALSAVLG 656 (786)
Q Consensus 644 AdG~Isg~aN~~P 656 (786)
+++++.|...+..
T Consensus 300 A~~V~iG~~~l~~ 312 (393)
T 2qr6_A 300 ADAVVLGSPLARA 312 (393)
T ss_dssp CSEEEECGGGGGS
T ss_pred CCEEEECHHHHcC
Confidence 9999998875443
No 225
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=60.70 E-value=9.9 Score=39.80 Aligned_cols=104 Identities=13% Similarity=0.160 Sum_probs=62.1
Q ss_pred HHHHHHHHHHcCCCEEEEcC-CCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEEE
Q psy11975 529 TIDLTQKAAKAGANAALILC-PYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRGV 606 (786)
Q Consensus 529 AIELAr~Ae~aGADAVmViP-PyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVGI 606 (786)
.++.|+.+ +.||+|+.|++ |.||.-+ .+|+++|.+++++||+-=|+ -+++-.+.+-... -..+-+
T Consensus 66 p~~iA~~~-~~GA~aiSVLTd~~~F~Gs------~~~L~~vr~~v~lPvLrKDF------iid~yQI~eAr~~GADaILL 132 (258)
T 4a29_A 66 PIEYAKFM-ERYAVGLSITTEEKYFNGS------YETLRKIASSVSIPILMSDF------IVKESQIDDAYNLGADTVLL 132 (258)
T ss_dssp HHHHHHHH-TTTCSEEEEECCSTTTCCC------HHHHHHHHTTCSSCEEEESC------CCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHH-hCCCeEEEEeCCCCCCCCC------HHHHHHHHHhcCCCEeeccc------cccHHHHHHHHHcCCCeeeh
Confidence 45667655 58999999877 7788876 57888999999999987664 4667666554432 123333
Q ss_pred EeC--CHHHHHHHHhh--cCCCCEEEEeCCcchhhhhhccCCc
Q psy11975 607 KDT--DNIKLANMANQ--TKDLNFSVFAGSAGYLLSGLLVGCA 645 (786)
Q Consensus 607 KDS--Dl~ri~~ll~~--~~~~df~Vf~G~DelLL~aL~~GAd 645 (786)
--+ +..++.++... ..+=+.-|=.=+.+-+--++.+|++
T Consensus 133 I~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~a~ 175 (258)
T 4a29_A 133 IVKILTERELESLLEYARSYGMEPLILINDENDLDIALRIGAR 175 (258)
T ss_dssp EGGGSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHTTCS
T ss_pred HHhhcCHHHHHHHHHHHHHHhHHHHHhcchHHHHHHHhcCCCc
Confidence 334 54444443321 2333433333333335556666664
No 226
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=60.63 E-value=74 Score=33.68 Aligned_cols=124 Identities=10% Similarity=0.007 Sum_probs=75.5
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcC--CCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAG--ANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aG--ADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++|.+.++. ..+.++.++.+.+.| ++++.+-... + +.....+..+.|.++++.|+++- |.-.+++
T Consensus 95 ~~v~v~~g~--~~~~~~~a~~~~~~g~~~~~i~i~~~~----G-~~~~~~~~i~~lr~~~~~~~vi~------G~v~s~e 161 (336)
T 1ypf_A 95 LIASISVGV--KEDEYEFVQQLAAEHLTPEYITIDIAH----G-HSNAVINMIQHIKKHLPESFVIA------GNVGTPE 161 (336)
T ss_dssp CCCEEEECC--SHHHHHHHHHHHHTTCCCSEEEEECSS----C-CSHHHHHHHHHHHHHCTTSEEEE------EEECSHH
T ss_pred CeEEEeCCC--CHHHHHHHHHHHhcCCCCCEEEEECCC----C-CcHHHHHHHHHHHHhCCCCEEEE------CCcCCHH
Confidence 355555543 255678899999999 9998764321 1 24567788888988887555552 3235677
Q ss_pred HHHHHHhCCCEEEEEeC--------------------CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCcccc
Q psy11975 593 TLVKLAHHENIRGVKDT--------------------DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGGI 648 (786)
Q Consensus 593 lL~rLAeiPNVVGIKDS--------------------Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~I 648 (786)
...++.+. .+-+|.-+ ++..+.++.+ .. ++.|+. |-- .-++.+|++||++++
T Consensus 162 ~A~~a~~a-Gad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~-~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~ 237 (336)
T 1ypf_A 162 AVRELENA-GADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAK-AA--SKPIIADGGIRTNGDVAKSIRFGATMVM 237 (336)
T ss_dssp HHHHHHHH-TCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHH-TC--SSCEEEESCCCSTHHHHHHHHTTCSEEE
T ss_pred HHHHHHHc-CCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHH-Hc--CCcEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 77777643 22223222 1233334433 22 555555 332 347788899999999
Q ss_pred ccccccc
Q psy11975 649 NALSAVL 655 (786)
Q Consensus 649 sg~aN~~ 655 (786)
.|.+.+.
T Consensus 238 iGr~~l~ 244 (336)
T 1ypf_A 238 IGSLFAG 244 (336)
T ss_dssp ESGGGTT
T ss_pred eChhhhc
Confidence 9988663
No 227
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=60.17 E-value=42 Score=34.71 Aligned_cols=121 Identities=19% Similarity=0.096 Sum_probs=77.6
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDT 593 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpel 593 (786)
.+||+.-=.-....+ ...|..+|||+|+++.-. . +++++.++++. |...++.+++== -+.+.
T Consensus 101 ~lPvLrKDfi~~~~q----i~ea~~~GAD~ilLi~a~---l--~~~~l~~l~~~-a~~lGl~~lvEv--------~~~eE 162 (251)
T 1i4n_A 101 CRPILAKDFYIDTVQ----VKLASSVGADAILIIARI---L--TAEQIKEIYEA-AEELGMDSLVEV--------HSRED 162 (251)
T ss_dssp CSCEEEECCCCSTHH----HHHHHHTTCSEEEEEGGG---S--CHHHHHHHHHH-HHTTTCEEEEEE--------CSHHH
T ss_pred CCCEEEeeCCCCHHH----HHHHHHcCCCEEEEeccc---C--CHHHHHHHHHH-HHHcCCeEEEEe--------CCHHH
Confidence 579987333333333 333888999999999652 2 36677666655 555688777653 14567
Q ss_pred HHHHHhC--CCEEEEEeC-------CHHHHHHHHhhcCCCCEEEEeCCc----chhhhhhccCCcccccccccc
Q psy11975 594 LVKLAHH--ENIRGVKDT-------DNIKLANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 594 L~rLAei--PNVVGIKDS-------Dl~ri~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN~ 654 (786)
+.+.++. +.++|+=.. |+....+++.. .+.+..+++... +.+.....+ ++|++-|.+-.
T Consensus 163 ~~~A~~l~g~~iIGinnr~l~t~~~d~~~~~~l~~~-ip~~~~vIaEsGI~t~edv~~~~~~-a~avLVG~aim 234 (251)
T 1i4n_A 163 LEKVFSVIRPKIIGINTRDLDTFEIKKNVLWELLPL-VPDDTVVVAESGIKDPRELKDLRGK-VNAVLVGTSIM 234 (251)
T ss_dssp HHHHHTTCCCSEEEEECBCTTTCCBCTTHHHHHGGG-SCTTSEEEEESCCCCGGGHHHHTTT-CSEEEECHHHH
T ss_pred HHHHHhcCCCCEEEEeCcccccCCCCHHHHHHHHHh-CCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEcHHHc
Confidence 7777665 679999763 77777788763 344444443322 234556677 99998887643
No 228
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=59.09 E-value=3.8 Score=44.58 Aligned_cols=87 Identities=6% Similarity=-0.088 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC--
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE-- 601 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP-- 601 (786)
.+.++++++++.++++|+|++-+....+.... ...-.++.+.|.+++++||+.= .| ++++...++.+..
T Consensus 252 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~--~~~~~~~~~~ik~~~~iPvi~~-----Gg--i~~~~a~~~l~~g~a 322 (377)
T 2r14_A 252 EPEAMAFYLAGELDRRGLAYLHFNEPDWIGGD--ITYPEGFREQMRQRFKGGLIYC-----GN--YDAGRAQARLDDNTA 322 (377)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC--------CCCTTHHHHHHHHCCSEEEEE-----SS--CCHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCcccCCC--CcchHHHHHHHHHHCCCCEEEE-----CC--CCHHHHHHHHHCCCc
Confidence 45789999999999999999999876542110 0002456677888889998763 23 3688888887644
Q ss_pred CEEEEEeC---CHHHHHHHHh
Q psy11975 602 NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 602 NVVGIKDS---Dl~ri~~ll~ 619 (786)
.+|++=-. |..-+.++.+
T Consensus 323 D~V~igR~~l~~P~l~~k~~~ 343 (377)
T 2r14_A 323 DAVAFGRPFIANPDLPERFRL 343 (377)
T ss_dssp SEEEESHHHHHCTTHHHHHHH
T ss_pred eEEeecHHHHhCchHHHHHHc
Confidence 34444322 6555555544
No 229
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=58.87 E-value=2.1 Score=46.83 Aligned_cols=62 Identities=8% Similarity=0.040 Sum_probs=43.1
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
+++|=+.+ .-+-.++..+..+|++-.++.|+-|...- ++++++..+++++..+..+.+++.|
T Consensus 184 a~vGD~~n--nva~Sl~~~~~~lG~~v~~~~P~~~~p~~--~~~~~~~~~~~~~~~g~~i~~~~d~ 245 (365)
T 4amu_A 184 VFIGDYKN--NVGVSTMIGAAFNGMHVVMCGPDNYKNEI--DKNVLAKCIELFKRNGGSLRFSTDK 245 (365)
T ss_dssp EEESSTTS--HHHHHHHHHHHHTTCEEEEESCGGGGGGS--CHHHHHHHHHHHHHHSCEEEEESCH
T ss_pred EEECCCCc--chHHHHHHHHHHcCCEEEEECCccccCCC--cHHHHHHHHHHHHHcCCEEEEECCH
Confidence 46666544 35778888889999998888888775311 2567777888777766666665543
No 230
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=58.28 E-value=35 Score=38.06 Aligned_cols=39 Identities=3% Similarity=-0.005 Sum_probs=31.6
Q ss_pred CCe-EEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q psy11975 514 QAD-LLKPQKH-TTTRATIDLTQKAAKAGANAALILCPYYF 552 (786)
Q Consensus 514 RVP-VIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPPyY~ 552 (786)
++| |++=+.. .+.++.++.|+.++++|||+|.+..-...
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~ 336 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQ 336 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSC
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 678 8885554 45668999999999999999999986653
No 231
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=58.15 E-value=18 Score=38.46 Aligned_cols=54 Identities=15% Similarity=0.246 Sum_probs=44.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCC--HHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYFQKKMT--EDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S--~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
-...+++.++++.+.+.|.|+|||- -.. .+ .+.+.++.++|.+.+++|+++.--
T Consensus 49 K~~~~~~~~~~~~~~~sGtDai~VG-S~~----vt~~~~~~~~~v~~ik~~~~lPvil~fP 104 (286)
T 3vk5_A 49 KVPVTEAVEKAAELTRLGFAAVLLA-STD----YESFESHMEPYVAAVKAATPLPVVLHFP 104 (286)
T ss_dssp TSCHHHHHHHHHHHHHTTCSCEEEE-CSC----CSSHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred CCCcHHHHHHHHHHHhcCCCEEEEc-cCC----CCcchHHHHHHHHHHHHhCCCCEEEECC
Confidence 3567888999999999999999999 321 35 788999999999989999999433
No 232
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=62.65 E-value=2.1 Score=37.65 Aligned_cols=58 Identities=12% Similarity=0.117 Sum_probs=46.5
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCC--CCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPT--QGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~--~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
..|.+|+.|+..-.+ -|.+|+|++.... ...|.|.|-|-+.+---||..++|..+++.
T Consensus 11 ~~~~~Gekv~~~~~~-~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~Rl~k~t~e 70 (85)
T 2lrq_A 11 TLFVDGERVLCFHGP-LIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPENRVLKYNDD 70 (85)
Confidence 469999999999866 6799999986543 247899999988644456889999999874
No 233
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=57.98 E-value=53 Score=34.99 Aligned_cols=92 Identities=13% Similarity=0.177 Sum_probs=57.2
Q ss_pred CCeEEEe-CCCCCHHHHHHHHHHHHHc----CCCEEEEcCCCCCC-CC--------CCHHHHHHHHHHHHhcCCCCEEE-
Q psy11975 514 QADLLKP-QKHTTTRATIDLTQKAAKA----GANAALILCPYYFQ-KK--------MTEDLIYEHFISVADNSPIPVII- 578 (786)
Q Consensus 514 RVPVIaG-VGa~ST~EAIELAr~Ae~a----GADAVmViPPyY~k-ps--------~S~eeLv~YFraIAeAtdLPIiL- 578 (786)
++-||+| +.-.+.+.+++.|++.+++ |...|+- ++|.| |. +..++=++.++++++..++|++-
T Consensus 41 ~l~vIaGPCsies~e~~~~~A~~lk~~~~~~~~~~v~k--~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv~Te 118 (298)
T 3fs2_A 41 PLALIAGPCQMETRDHAFEMAGRLKEMTDKLGIGLVYK--SSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPVLTD 118 (298)
T ss_dssp CCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEEEE--CBCCCCC---------CCHHHHHHHHHHHHHHHCCCEEEE
T ss_pred ceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCcEEEE--cccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEE
Confidence 5779998 4456888888888888876 4555443 34443 11 12345567788888888998873
Q ss_pred ----------------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 ----------------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 ----------------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|-+|++ .--..+++.++++...-+++|-.
T Consensus 119 v~D~~~v~~l~~~vd~lkIgA~--~~~n~~LLr~va~~gkPVilK~G 163 (298)
T 3fs2_A 119 IHTEEQCAAVAPVVDVLQIPAF--LCRQTDLLIAAARTGRVVNVKKG 163 (298)
T ss_dssp CCSHHHHHHHTTTCSEEEECGG--GTTCHHHHHHHHHTTSEEEEECC
T ss_pred eCCHHHHHHHHhhCCEEEECcc--ccCCHHHHHHHHccCCcEEEeCC
Confidence 233321 11234466666666667777765
No 234
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=57.48 E-value=27 Score=36.31 Aligned_cols=121 Identities=7% Similarity=-0.033 Sum_probs=68.3
Q ss_pred CCeEEEeCCCCCHH---HHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 514 QADLLKPQKHTTTR---ATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 514 RVPVIaGVGa~ST~---EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
.+||++= +-.+.- ...+.++.+.++|+|++++..= ..+++.+|.+.+ ++.+++++..=.|. .+
T Consensus 91 ~~Pii~m-~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl-------~~ee~~~~~~~~-~~~gl~~i~liap~-----s~ 156 (271)
T 1ujp_A 91 EKPLFLM-TYLNPVLAWGPERFFGLFKQAGATGVILPDL-------PPDEDPGLVRLA-QEIGLETVFLLAPT-----ST 156 (271)
T ss_dssp CSCEEEE-CCHHHHHHHCHHHHHHHHHHHTCCEEECTTC-------CGGGCHHHHHHH-HHHTCEEECEECTT-----CC
T ss_pred CCCEEEE-ecCcHHHHhhHHHHHHHHHHcCCCEEEecCC-------CHHHHHHHHHHH-HHcCCceEEEeCCC-----CC
Confidence 4788773 222221 2356788899999999888532 135555555544 45566655443442 45
Q ss_pred HHHHHHHHh-CCCEEEEE---------eC---C-HHHHHHHHhhcCCCCEEEEeCCc---chhhhhhccCCcccccccc
Q psy11975 591 VDTLVKLAH-HENIRGVK---------DT---D-NIKLANMANQTKDLNFSVFAGSA---GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 591 pelL~rLAe-iPNVVGIK---------DS---D-l~ri~~ll~~~~~~df~Vf~G~D---elLL~aL~~GAdG~Isg~a 652 (786)
.+.+.++++ -..++++= .. + ...+.++.+ .. ++.|+.|.. .--+..+ .|+||+|.|.+
T Consensus 157 ~eri~~ia~~~~gfiy~vs~~G~TG~~~~~~~~~~~~v~~vr~-~~--~~Pv~vGfGI~t~e~a~~~-~~ADgVIVGSA 231 (271)
T 1ujp_A 157 DARIATVVRHATGFVYAVSVTGVTGMRERLPEEVKDLVRRIKA-RT--ALPVAVGFGVSGKATAAQA-AVADGVVVGSA 231 (271)
T ss_dssp HHHHHHHHTTCCSCEEEECC------------CCHHHHHHHHT-TC--CSCEEEESCCCSHHHHHHH-TTSSEEEECHH
T ss_pred HHHHHHHHHhCCCCEEEEecCcccCCCCCCCccHHHHHHHHHh-hc--CCCEEEEcCCCCHHHHHHh-cCCCEEEEChH
Confidence 678888874 23444332 11 2 344444543 22 455555553 2233346 99999999975
No 235
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=57.47 E-value=25 Score=34.29 Aligned_cols=75 Identities=15% Similarity=0.124 Sum_probs=47.3
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC--CC-HHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKK--MT-EDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps--~S-~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
..++++++. +.++ ++.++++|+|.+++.++.|.... .. ...-+++++++.+.+++||+.= .|+ -+
T Consensus 119 ~~~v~~~~~--t~~e----~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~-----GGI-~~ 186 (223)
T 1y0e_A 119 NVEIMADIA--TVEE----AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAE-----GNV-IT 186 (223)
T ss_dssp TSEEEEECS--SHHH----HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEE-----SSC-CS
T ss_pred CceEEecCC--CHHH----HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEe-----cCC-CC
Confidence 456666553 3444 55688999999998877653211 00 2234678888888888887742 232 27
Q ss_pred HHHHHHHHhC
Q psy11975 591 VDTLVKLAHH 600 (786)
Q Consensus 591 pelL~rLAei 600 (786)
++.+.++.+.
T Consensus 187 ~~~~~~~~~~ 196 (223)
T 1y0e_A 187 PDMYKRVMDL 196 (223)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 8888887654
No 236
>2bu3_A ALR0975 protein; phytochelatin synthase, PCS, acyl-enzyme intermedia nostoc, glutathione metabolism, cysteine protease, transfer; HET: 3GC; 1.4A {Anabaena SP} SCOP: d.3.1.14 PDB: 2btw_A* 2btw_B
Probab=57.44 E-value=2.2 Score=44.61 Aligned_cols=14 Identities=57% Similarity=1.101 Sum_probs=0.0
Q ss_pred ccccCCCCCCCCCC
Q psy11975 197 HRSYGRSHHHSHHH 210 (786)
Q Consensus 197 ~~~~~~~~~~~~~~ 210 (786)
.|.|--.|||.|||
T Consensus 6 ~~~~~~~~~~~~~~ 19 (254)
T 2bu3_A 6 RRRYTMGHHHHHHH 19 (254)
T ss_dssp --------------
T ss_pred eehhcccccccccc
Confidence 46677777766554
No 237
>4g1u_A Hemin transport system permease protein HMUU; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=57.24 E-value=2.2 Score=46.45 Aligned_cols=11 Identities=18% Similarity=-0.130 Sum_probs=5.3
Q ss_pred ccccHHHHHHH
Q psy11975 653 AVLGGPICELY 663 (786)
Q Consensus 653 N~~Pel~vaL~ 663 (786)
-+.|.+.+.++
T Consensus 285 LivPhiaR~l~ 295 (357)
T 4g1u_A 285 LVVPHLIRMRI 295 (357)
T ss_dssp THHHHHHHTTS
T ss_pred HHHHHHHHHHh
Confidence 34565554443
No 238
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.58 E-value=26 Score=34.86 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=55.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCCEEEE
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHENIRGV 606 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPNVVGI 606 (786)
.+.+++++.++++|||++.+..+.-.... .....+..++|.+.+++||++-. .--+++.+.++.+.. +-++
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~~~~--~~~~~~~i~~i~~~~~ipvi~~g------gI~~~~~~~~~~~~G-ad~V 100 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITASVEK--RKTMLELVEKVAEQIDIPFTVGG------GIHDFETASELILRG-ADKV 100 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCSSSH--HHHHHHHHHHHHTTCCSCEEEES------SCCSHHHHHHHHHTT-CSEE
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchhhcC--CcccHHHHHHHHHhCCCCEEEeC------CCCCHHHHHHHHHcC-CCEE
Confidence 47788999999999999988765422222 33456777889888899998842 234677777777542 2233
Q ss_pred EeC-----CHHHHHHHHh
Q psy11975 607 KDT-----DNIKLANMAN 619 (786)
Q Consensus 607 KDS-----Dl~ri~~ll~ 619 (786)
=.. +...+.++++
T Consensus 101 ~lg~~~l~~p~~~~~~~~ 118 (253)
T 1thf_D 101 SINTAAVENPSLITQIAQ 118 (253)
T ss_dssp EESHHHHHCTHHHHHHHH
T ss_pred EEChHHHhChHHHHHHHH
Confidence 222 5555666554
No 239
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=56.34 E-value=1.4e+02 Score=30.89 Aligned_cols=166 Identities=13% Similarity=0.074 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEEcC-----CCCCCC-----CCCHHHHHHHHHHHHhcCCCCEEEEeCC-----------------
Q psy11975 530 IDLTQKAAKAGANAALILC-----PYYFQK-----KMTEDLIYEHFISVADNSPIPVIIYNNT----------------- 582 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViP-----PyY~kp-----s~S~eeLv~YFraIAeAtdLPIiLYNiP----------------- 582 (786)
.++|+.+++.|||+|+++. ..++.. . .+..++|.+++++||++-+..
T Consensus 31 ~~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~------~~~i~~I~~~~~iPv~~k~r~g~~~~~~~~~a~GAd~V 104 (305)
T 2nv1_A 31 AEQAKIAEEAGAVAVMALERVPADIRAAGGVARMAD------PTIVEEVMNAVSIPVMAKARIGHIVEARVLEAMGVDYI 104 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCC-------CCCCCCCCC------HHHHHHHHHHCSSCEEEEECTTCHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCC------HHHHHHHHHhCCCCEEecccccchHHHHHHHHCCCCEE
Q ss_pred --------CCcCCccC---------------HHHHHHHHhCCCEEEEE--------------------------------
Q psy11975 583 --------FVTNIDIS---------------VDTLVKLAHHENIRGVK-------------------------------- 607 (786)
Q Consensus 583 --------~~TGv~LS---------------pelL~rLAeiPNVVGIK-------------------------------- 607 (786)
......+. .+....+..=..+++++
T Consensus 105 ~~~~~l~~~~~~~~i~~~~~g~~v~~~~~~~~e~~~a~~~Gad~V~~~G~~g~g~~~~~~~h~rt~~~~i~~l~gi~~~~ 184 (305)
T 2nv1_A 105 DESEVLTPADEEFHLNKNEYTVPFVCGCRDLGEATRRIAEGASMLRTKGEPGTGNIVEAVRHMRKVNAQVRKVVAMSEDE 184 (305)
T ss_dssp EECTTSCCSCSSCCCCGGGCSSCEEEEESSHHHHHHHHHTTCSEEEECCCTTSCCTHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred EEeccCCHHHHHHHHHHhccCCcEEEEeCCHHHHHHHHHCCCCEEEeccccCccchHHHHhhhhhhhccchhhccccchh
Q ss_pred -------eC-CHHHHHHHHhhcCCCCEE--EEeCC--cchhhhhhccCCcccccccccc---cc-HHHHHHHHHHHc-CC
Q psy11975 608 -------DT-DNIKLANMANQTKDLNFS--VFAGS--AGYLLSGLLVGCAGGINALSAV---LG-GPICELYDLAKA-GK 670 (786)
Q Consensus 608 -------DS-Dl~ri~~ll~~~~~~df~--Vf~G~--DelLL~aL~~GAdG~Isg~aN~---~P-el~vaL~eA~~a-GD 670 (786)
.. ++..+.++.+ ...-.+- ...|- .+.+...+..|++|++.|.+.+ -| +.+.++.+++.+ .+
T Consensus 185 ~~~~~~~~~~~~~~i~~i~~-~~~iPvi~~a~GGI~~~~d~~~~~~~GadgV~vGsai~~~~~p~~~~~~l~~~~~~~~~ 263 (305)
T 2nv1_A 185 LMTEAKNLGAPYELLLQIKK-DGKLPVVNFAAGGVATPADAALMMQLGADGVFVGSGIFKSDNPAKFAKAIVEATTHFTD 263 (305)
T ss_dssp HHHHHHHHTCCHHHHHHHHH-HTSCSSCEEBCSCCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHHHHHHHHHTTTC
T ss_pred hhcccccccccHHHHHHHHH-hcCCCEEEEeccCCCCHHHHHHHHHcCCCEEEEcHHHHcCCCHHHHHHHHHHHHHHhcC
Q ss_pred HHHHHHHHHHhhhhHHHHHhhhhccccCHHHHHH--HHHHcCC
Q psy11975 671 WEEAMKLQHRLVKPDVTVRNVLLMKEMGVPGVRA--AMELYGY 711 (786)
Q Consensus 671 ~eeAreLQ~rL~pLi~~l~~~~~~~~~~ia~lKa--aL~lrGI 711 (786)
.+....+.+.+-..+..+ .+..+|. .|+.||.
T Consensus 264 ~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~~~ 297 (305)
T 2nv1_A 264 YKLIAELSKELGTAMKGI---------EISNLLPEQRMQERGW 297 (305)
T ss_dssp HHHHHHHTSCC--------------------------------
T ss_pred hhhHHHHHHHhhhhhcCC---------ChhhcchHHHHHhhcc
No 240
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=56.32 E-value=6.1 Score=33.47 Aligned_cols=54 Identities=13% Similarity=-0.015 Sum_probs=42.0
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSL 410 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpF 410 (786)
..+|.+||-|.|.-.===.-||.|.......+++.|+|+... -.||..++|+++
T Consensus 11 ~~~f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~s---~~w~~~kdi~~~ 64 (66)
T 2eqj_A 11 ACKFEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDSS---KSWVLWKDIQTG 64 (66)
T ss_dssp CCCSCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTTE---EEEEETTTEECC
T ss_pred cccccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccCC---EEEEEeeccccc
Confidence 347999999999844444678999988877799999998775 355777888875
No 241
>1uoz_A Putative cellulase; hydrolase, glycoside hydrolase, family 6; HET: GLC SSG; 1.10A {Mycobacterium tuberculosis} SCOP: c.6.1.1 PDB: 1up3_A* 1up0_A* 1up2_A*
Probab=56.11 E-value=2.5 Score=45.40 Aligned_cols=70 Identities=9% Similarity=0.006 Sum_probs=39.9
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcC---CCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCc
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKAG---ANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNID 588 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~aG---ADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~ 588 (786)
.++-|.+-+|+..--.+-.+++...++| ++++.+=.--|.. .++-..|-++|.... ++.+||=- +|.|..
T Consensus 172 pnv~vYlDaGh~gWl~a~~~a~~l~~AG~~~vrGfatNVSNy~~----t~dE~~y~~~l~~~~~~~~fVIDT--SRNG~g 245 (315)
T 1uoz_A 172 PAAAVYVDAGHSRWLSAEAMAARLNDVGVGRARGFSLNVSNFYT----TDEEIGYGEAISGLTNGSHYVIDT--SRNGAG 245 (315)
T ss_dssp TTEEEEEECCCTTSSCHHHHHHHHHHTTGGGSSEEEECTTCCCC----HHHHHHHHHHHHHHTTTCEEEEEC--TTCTTC
T ss_pred CCeEEEEeCCCccccCHHHHHHHHHhcCccceeEEEEecCCCCC----cccHHHHHHHHHhcCCCCCEEEEC--CCCCCC
Confidence 3566777665543333445555556666 7888876655542 344467888875433 56665543 345544
No 242
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=55.93 E-value=6.2 Score=42.67 Aligned_cols=85 Identities=6% Similarity=-0.084 Sum_probs=57.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC-
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE- 601 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP- 601 (786)
.+.++++++++.++++|+|++-+....|.. +. .+ .++.+.|.+++++||+.= .|+ +++...++.+..
T Consensus 247 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~-~~---~~~~~~i~~~~~iPvi~~-----Ggi--~~~~a~~~l~~g~ 315 (365)
T 2gou_A 247 DPILTYTAAAALLNKHRIVYLHIAEVDWDDAPD-TP---VSFKRALREAYQGVLIYA-----GRY--NAEKAEQAINDGL 315 (365)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC-CC---HHHHHHHHHHCCSEEEEE-----SSC--CHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCC-cc---HHHHHHHHHHCCCcEEEe-----CCC--CHHHHHHHHHCCC
Confidence 467899999999999999999999875421 21 01 256677888889998753 233 788888887644
Q ss_pred -CEEEEEeC---CHHHHHHHHh
Q psy11975 602 -NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 602 -NVVGIKDS---Dl~ri~~ll~ 619 (786)
.+|++=-. |..-+.++.+
T Consensus 316 aD~V~igR~~i~~P~l~~~~~~ 337 (365)
T 2gou_A 316 ADMIGFGRPFIANPDLPERLRH 337 (365)
T ss_dssp CSEEECCHHHHHCTTHHHHHHH
T ss_pred cceehhcHHHHhCchHHHHHHc
Confidence 34443222 6555555544
No 243
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=55.56 E-value=84 Score=31.97 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=72.6
Q ss_pred eEEEeCCC--CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc-----
Q psy11975 516 DLLKPQKH--TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID----- 588 (786)
Q Consensus 516 PVIaGVGa--~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~----- 588 (786)
-|++|.+. ....|..++.+.|.++|-+.++.+- +.+++ +.+...+-.|+-||....-|..
T Consensus 88 ~VllghseRR~~~~e~~~k~~~A~~~GL~~ivcVg--------e~~e~-----~~~~~~~~~iIayep~waiGtG~~v~t 154 (226)
T 1w0m_A 88 GVILNHSEAPLKLNDLARLVAKAKSLGLDVVVCAP--------DPRTS-----LAAAALGPHAVAVEPPELIGTGRAVSR 154 (226)
T ss_dssp EEEECCTTSCCBHHHHHHHHHHHHHTTCEEEEEES--------SHHHH-----HHHHHTCCSEEEECCGGGTTTSCCHHH
T ss_pred EEEEeeeeccCCHHHHHHHHHHHHHCCCEEEEEeC--------CHHHH-----HHHhcCCCCEEEEcChhhhccCCCCCC
Confidence 47778877 7788889999999999999888873 13333 1223445569999987654443
Q ss_pred cCHHHHHHHHhCCCEEEEEeCCHHHHHHHHhhcCCCCEEEEeCCcc----hhhhhhccCCccccccccccccHHHHHHHH
Q psy11975 589 ISVDTLVKLAHHENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAG----YLLSGLLVGCAGGINALSAVLGGPICELYD 664 (786)
Q Consensus 589 LSpelL~rLAeiPNVVGIKDSDl~ri~~ll~~~~~~df~Vf~G~De----lLL~aL~~GAdG~Isg~aN~~Pel~vaL~e 664 (786)
.+++.+.+. .++++.. .+++.++.|..- ........|+||+.-|.+.+-++-+.++++
T Consensus 155 ~~~d~~~~~-----------------~~~ir~~-~~~~~ilyggsV~~~n~~~~~~~~giDG~LVG~a~l~a~~~~~~i~ 216 (226)
T 1w0m_A 155 YKPEAIVET-----------------VGLVSRH-FPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIV 216 (226)
T ss_dssp HCHHHHHHH-----------------HHHHHHH-CTTSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTCSSHHHHHH
T ss_pred CChhHHHHH-----------------HHHHHhc-cCCCEEEEeCCCCcHHHHHHHHhCCCCEEEECHHHHCCcCHHHHHH
Confidence 444433332 3333322 235565555431 222334679999998887665554544444
Q ss_pred H
Q psy11975 665 L 665 (786)
Q Consensus 665 A 665 (786)
.
T Consensus 217 ~ 217 (226)
T 1w0m_A 217 E 217 (226)
T ss_dssp H
T ss_pred H
Confidence 3
No 244
>3a5i_A Flagellar biosynthesis protein FLHA; four domains, thioredoxin-like fold, bacterial flagellum BIO bacterial flagellum protein export; 2.80A {Salmonella typhimurium}
Probab=55.08 E-value=2.5 Score=46.59 Aligned_cols=14 Identities=21% Similarity=0.259 Sum_probs=8.6
Q ss_pred CCCCHHHHHHHHHh
Q psy11975 465 TSMPIQKRKSLLRK 478 (786)
Q Consensus 465 ~sLT~dER~~Lle~ 478 (786)
--|+.+|=++|++.
T Consensus 199 ellg~qEvq~LLd~ 212 (389)
T 3a5i_A 199 ELFGRQEAQQLLDR 212 (389)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred HHhCHHHHHHHHHH
Confidence 34566666666665
No 245
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=55.08 E-value=29 Score=36.00 Aligned_cols=90 Identities=12% Similarity=0.072 Sum_probs=60.3
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC----C---CHHH------HHHHHHHHHhcC-CCCEEE--Ee
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKK----M---TEDL------IYEHFISVADNS-PIPVII--YN 580 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps----~---S~ee------Lv~YFraIAeAt-dLPIiL--YN 580 (786)
.++-+|..+.+.++++++..++.|||.+=+--||--..- + +... +.+.|+.|.+.- .+|+++ |-
T Consensus 18 ~yitaG~P~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~ 97 (252)
T 3tha_A 18 AYTVLGYPNLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYY 97 (252)
T ss_dssp EEEETTSSCHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEecc
Confidence 345789999999999999999999999999999854321 0 0000 133444444322 378877 77
Q ss_pred CCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 581 NTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 581 iP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
+|-. .+..+.+.+.++--.+-|+---
T Consensus 98 N~i~---~~G~e~F~~~~~~aGvdG~Iip 123 (252)
T 3tha_A 98 NLIF---SYGLEKFVKKAKSLGICALIVP 123 (252)
T ss_dssp HHHH---HHCHHHHHHHHHHTTEEEEECT
T ss_pred CHHH---HhhHHHHHHHHHHcCCCEEEeC
Confidence 7753 2346666666655578888777
No 246
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=54.75 E-value=16 Score=38.55 Aligned_cols=61 Identities=11% Similarity=0.151 Sum_probs=38.5
Q ss_pred CCCCCHHHHHHHHHhCCCCCccCCCccccccCCCCCCCCCCCCCccccCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCE
Q psy11975 464 STSMPIQKRKSLLRKFPLWPELEPSTSELKRSDRPMSVGPRSVRPSEREWQADLLKPQKHTTTRATIDLTQKAAKAGANA 543 (786)
Q Consensus 464 ~~sLT~dER~~Lle~~~~wve~~a~~~e~~~~~~~~~~~~r~v~veevaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADA 543 (786)
+..|+.++|.++++. ..+.. .+.-+++.+.+-.- ...++.+-|++++...++||+.
T Consensus 133 ti~l~~~~~~~lI~~---a~~~f-------------------~Vl~EvG~K~~~~~--~~~~~~~~I~~~~~dLeAGA~~ 188 (276)
T 1u83_A 133 TLPMTNKEKAAYIAD---FSDEF-------------------LVLSEVGSKDAELA--SRQSSEEWLEYIVEDMEAGAEK 188 (276)
T ss_dssp SSCCCHHHHHHHHHH---HTTTS-------------------EEEEECSCCC--------CCSTHHHHHHHHHHHHTEEE
T ss_pred cccCCHHHHHHHHHH---HHhhc-------------------EEeeeccccCcccc--CCCCHHHHHHHHHHHHHCCCcE
Confidence 478999999999998 22110 00112222222111 2245689999999999999999
Q ss_pred EEEcC
Q psy11975 544 ALILC 548 (786)
Q Consensus 544 VmViP 548 (786)
||+=.
T Consensus 189 ViiEa 193 (276)
T 1u83_A 189 VITEA 193 (276)
T ss_dssp EEEC-
T ss_pred EEEee
Confidence 99975
No 247
>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A
Probab=54.63 E-value=2.6 Score=41.16 Aligned_cols=14 Identities=64% Similarity=1.160 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCc
Q psy11975 204 HHHSHHHRSHSHHH 217 (786)
Q Consensus 204 ~~~~~~~~~~~~~~ 217 (786)
|||+|||..|+|.|
T Consensus 3 ~~~~~~~~~~~~~~ 16 (214)
T 2l4h_A 3 HHHHHHHHHHSSGH 16 (214)
T ss_dssp --------------
T ss_pred ccccccccccccCC
No 248
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=54.46 E-value=81 Score=35.31 Aligned_cols=124 Identities=12% Similarity=0.046 Sum_probs=78.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDT 593 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpel 593 (786)
.+||+.-=.-..+.+ ...|..+|||+|+++.-. . +++++.++++. |...++.+++=- =+.+.
T Consensus 108 ~lPvLrKDFI~d~~Q----i~ea~~~GAD~ILLi~a~---l--~~~~l~~l~~~-a~~lgm~~LvEv--------h~~eE 169 (452)
T 1pii_A 108 PQPILCKDFIIDPYQ----IYLARYYQADACLLMLSV---L--DDDQYRQLAAV-AHSLEMGVLTEV--------SNEEE 169 (452)
T ss_dssp CSCEEEESCCCSHHH----HHHHHHTTCSEEEEETTT---C--CHHHHHHHHHH-HHHTTCEEEEEE--------CSHHH
T ss_pred CCCeEEEeccCCHHH----HHHHHHcCCCEEEEEccc---C--CHHHHHHHHHH-HHHcCCeEEEEe--------CCHHH
Confidence 689987443344443 333788999999999763 2 36677766655 455688777653 13566
Q ss_pred HHHHHh-CCCEEEEEeC-------CHHHHHHHHhhcCCCCEEEEeCCc----chhhhhhccCCccccccccccccH
Q psy11975 594 LVKLAH-HENIRGVKDT-------DNIKLANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSAVLGG 657 (786)
Q Consensus 594 L~rLAe-iPNVVGIKDS-------Dl~ri~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN~~Pe 657 (786)
+.+.++ -+.++|+=.. |+....+++... +.+..+++... +.+.....+ ++|++-|.+-.-++
T Consensus 170 ~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~i-p~~~~vIaEsGI~t~edv~~~~~~-a~avLVGealmr~~ 243 (452)
T 1pii_A 170 QERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKL-GHNVTVISESGINTYAQVRELSHF-ANGFLIGSALMAHD 243 (452)
T ss_dssp HHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHH-CTTSEEEEESCCCCHHHHHHHTTT-CSEEEECHHHHTCS
T ss_pred HHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhC-CCCCeEEEECCCCCHHHHHHHHHh-CCEEEEcHHHcCCc
Confidence 666555 4679998653 788888877633 34444444332 234555667 89998887655443
No 249
>4e4j_A Arginine deiminase; L-arginine, L-citrulline, NH3, hydrolase; 2.30A {Mycoplasma penetrans}
Probab=54.30 E-value=2.6 Score=46.51 Aligned_cols=61 Identities=10% Similarity=0.071 Sum_probs=32.9
Q ss_pred CCeEEEeCCCCCHHHHHHHH-HHHHHcCC---CEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 514 QADLLKPQKHTTTRATIDLT-QKAAKAGA---NAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELA-r~Ae~aGA---DAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
+--+++|++.-+..++++.. +.....|. +.+++..-.-... +-|...+..-++-..++++-
T Consensus 247 ~~~l~iG~s~RTn~~gie~La~~L~~~~~~~~~~v~~~~~~~~~~-------~mHLDt~ft~ld~d~~li~p 311 (433)
T 4e4j_A 247 SKTLVIGNSERTNFAAIESVAKNIQANKDCTFERIVVINVPPMPN-------LMHLDTWLTMLDYDKFLYSP 311 (433)
T ss_dssp SSEEEEEESSSCCHHHHHHHHHHHHTCSSCCCCEEEEEECCCCTT-------CCSHHHHEEECSSSEEEECT
T ss_pred CCEEEEEecccChHHHHHHHHHHHhhcCceeEEEEEeecccCCcc-------ceecCceEEEeCCCeEEEch
Confidence 33467788887777777654 44444443 3443332111111 23666666666666777653
No 250
>3jrx_A Acetyl-COA carboxylase 2; BC domain, soraphen A, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase, lipid synthesis; HET: S1A; 2.50A {Homo sapiens} PDB: 3jrw_A*
Probab=54.20 E-value=2.7 Score=48.57 Aligned_cols=24 Identities=50% Similarity=0.880 Sum_probs=0.0
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCcc
Q psy11975 193 SPPTHRSYGRSHHHSHHHRSHSHHHH 218 (786)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (786)
.|+++- +--.||+|||-.|+||||
T Consensus 564 ~~~~~~--~~~~~~~~~~~~~~~~~~ 587 (587)
T 3jrx_A 564 KPDIML--GVLEHHHHHHLEHHHHHH 587 (587)
T ss_dssp --------------------------
T ss_pred CCcchh--hhhhhcccchhhccccCC
Confidence 344443 334455566666666655
No 251
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=54.18 E-value=29 Score=36.13 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=47.2
Q ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC----------------CCCHHHHHHHHHHHHhc-CCCCEEE--E
Q psy11975 519 KPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQK----------------KMTEDLIYEHFISVADN-SPIPVII--Y 579 (786)
Q Consensus 519 aGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kp----------------s~S~eeLv~YFraIAeA-tdLPIiL--Y 579 (786)
+-.|..+.+.+++.++..++.|||.+-+--||-... +++-+.+.+..++|-+. +++|+++ |
T Consensus 24 i~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y 103 (267)
T 3vnd_A 24 VTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLY 103 (267)
T ss_dssp EETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEEC
T ss_pred EeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEec
Confidence 467888999999999999999999999999873221 01233456666677666 7889877 5
Q ss_pred eCC
Q psy11975 580 NNT 582 (786)
Q Consensus 580 NiP 582 (786)
-+|
T Consensus 104 ~np 106 (267)
T 3vnd_A 104 ANL 106 (267)
T ss_dssp HHH
T ss_pred CcH
Confidence 455
No 252
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=54.14 E-value=2.7 Score=41.94 Aligned_cols=9 Identities=22% Similarity=0.103 Sum_probs=4.0
Q ss_pred CcEEEEEeC
Q psy11975 385 GRVWVKWFG 393 (786)
Q Consensus 385 g~~~V~fFG 393 (786)
|++.-.|.|
T Consensus 156 G~I~~~~~g 164 (221)
T 2c0d_A 156 GCVRHQTVN 164 (221)
T ss_dssp SBEEEEEEE
T ss_pred CeEEEEEec
Confidence 444433444
No 253
>3b0g_A NII3, nitrite reductase; siroheme, Fe4S4 binding protein, oxidoreductase; HET: SRM; 1.25A {Nicotiana tabacum} PDB: 3vkp_A* 3vkq_A* 3vkr_A* 3vks_A* 3vkt_A* 3b0n_A* 3b0m_A* 3b0j_A* 3b0l_A* 3b0h_A*
Probab=54.05 E-value=2.7 Score=48.55 Aligned_cols=15 Identities=27% Similarity=0.310 Sum_probs=0.0
Q ss_pred cccCCCCCccccccc
Q psy11975 223 KHHHSKPLSRTMFGP 237 (786)
Q Consensus 223 ~~~~~~~~~~~~~~~ 237 (786)
.|..||-.-|....|
T Consensus 20 ~~~~~~~~~~~~~~~ 34 (591)
T 3b0g_A 20 RHMFSKNAVKLHATP 34 (591)
T ss_dssp ---------------
T ss_pred hhhhhhhhHhhhcCC
Confidence 455555555555554
No 254
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=53.93 E-value=3.6 Score=44.71 Aligned_cols=13 Identities=31% Similarity=0.394 Sum_probs=6.1
Q ss_pred HHHHHHHHHHHHc
Q psy11975 727 GGAEKIKQVLTEA 739 (786)
Q Consensus 727 eekaeL~~~L~~l 739 (786)
...+.|.+.++++
T Consensus 320 ~l~~~i~~~l~~a 332 (380)
T 3c3r_A 320 DFSDKINRALAAA 332 (380)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3445555555443
No 255
>3v5u_A Uncharacterized membrane protein MJ0091; lipid cubic phase, cation protein complex, sodium,calcium EX membrane protein; HET: OLC MYS 1PE; 1.90A {Methanocaldococcus jannaschii} PDB: 3v5s_A*
Probab=53.70 E-value=2.7 Score=44.93 Aligned_cols=9 Identities=89% Similarity=1.579 Sum_probs=0.0
Q ss_pred CCCCCCCCC
Q psy11975 202 RSHHHSHHH 210 (786)
Q Consensus 202 ~~~~~~~~~ 210 (786)
|||||+|||
T Consensus 312 ~~~~~~~~~ 320 (320)
T 3v5u_A 312 RSHHHHHHH 320 (320)
T ss_dssp ---------
T ss_pred cccccccCC
Confidence 667766554
No 256
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=53.61 E-value=2.8 Score=42.72 Aligned_cols=34 Identities=9% Similarity=-0.012 Sum_probs=25.1
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILC 548 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViP 548 (786)
..|+--+|+|.| +.+...++...+.||+-+++.|
T Consensus 29 L~gk~VLVVGgG----~va~~ka~~Ll~~GA~VtVvap 62 (223)
T 3dfz_A 29 LKGRSVLVVGGG----TIATRRIKGFLQEGAAITVVAP 62 (223)
T ss_dssp CTTCCEEEECCS----HHHHHHHHHHGGGCCCEEEECS
T ss_pred cCCCEEEEECCC----HHHHHHHHHHHHCCCEEEEECC
Confidence 345666788877 6678888889999998665553
No 257
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=53.56 E-value=9.4 Score=32.26 Aligned_cols=55 Identities=16% Similarity=0.131 Sum_probs=42.4
Q ss_pred CCCCCCCceEEEecccCC-CCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYP-SWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLS 411 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~P-wWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFs 411 (786)
..+|++||.|-||-.|-- ..|++|.+.......|.|.|=. ++ -..+..++|+|..
T Consensus 7 ~~~~~vgd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKd-gT--~e~L~~kDIkp~~ 62 (66)
T 2l8d_A 7 NRKYADGEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKD-GT--ELALKESDIRLQS 62 (66)
T ss_dssp SSSSCSSCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETT-SC--EEEEEGGGEECSS
T ss_pred ceEeecCCEEEEEcCCCccceEEEEEEeccCCceEEEEecC-CC--EEeechhccccch
Confidence 468999999999976643 5688999988666788999876 53 4557788998873
No 258
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=53.49 E-value=2.8 Score=46.93 Aligned_cols=39 Identities=21% Similarity=0.294 Sum_probs=20.6
Q ss_pred HHHHHHHHHcCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHc-CCC
Q psy11975 700 PGVRAAMELYGYYGG-RSRRPLPAALKPGGAEKIKQVLTEA-GFL 742 (786)
Q Consensus 700 a~lKaaL~lrGI~~G-~vR~PL~~pLseeekaeL~~~L~~l-Gll 742 (786)
+++=+.|-+.|...+ -+-.|+. .+..+-+.+.|++. |+.
T Consensus 420 ~ai~a~~i~~g~i~~~Gv~~P~~----~e~~~p~l~~L~~~~Gi~ 460 (467)
T 2axq_A 420 VAIATKFVLDGTIKGPGLLAPYS----PEINDPIMKELKDKYGIY 460 (467)
T ss_dssp HHHHHHHHHTTSSCCSEEECSCS----HHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHhCCccCCCcccCCCc----HHHHHHHHHHHHHhcCCc
Confidence 333344445565432 2445544 66666777777763 653
No 259
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=53.30 E-value=6.2 Score=41.41 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCccCHHHHHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDISVDTLVKLA 598 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~LSpelL~rLA 598 (786)
.+++++.|+..+++|||++++-.. + . + -.++|.++.++|++-.-. |...|.-|=...+.-|.
T Consensus 160 a~~~i~rA~a~~eAGA~~ivlE~v----p---~-~---~a~~it~~l~iP~igIGag~~~dgQvLV~~D~lG~~ 222 (264)
T 1m3u_A 160 GDQLLSDALALEAAGAQLLVLECV----P---V-E---LAKRITEALAIPVIGIGAGNVTDGQILVMHDAFGIT 222 (264)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESC----C---H-H---HHHHHHHHCSSCEEEESSCTTSSEEEECHHHHTTCS
T ss_pred HHHHHHHHHHHHHCCCcEEEEecC----C---H-H---HHHHHHHhCCCCEEEeCCCCCCCcceeeHHhhcCCC
Confidence 478999999999999999988642 1 2 2 256889999999998765 44556555555555543
No 260
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=53.00 E-value=62 Score=31.62 Aligned_cols=83 Identities=8% Similarity=0.045 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCC----HHHHHHHHHHHHhc---CCCCEEEEeCCCCcCCccCHHHHHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMT----EDLIYEHFISVADN---SPIPVIIYNNTFVTNIDISVDTLVKLA 598 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S----~eeLv~YFraIAeA---tdLPIiLYNiP~~TGv~LSpelL~rLA 598 (786)
.+...+.++.|+++||+.|.+.+..... ..+ .+.+++.++++++. .++.|.+-|.+......-+++.+.+|+
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~ 161 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQ-KIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIV 161 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSS-CCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCC-CCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHH
Confidence 3455667788899999999986654321 112 24456666666654 479999999875421334677888887
Q ss_pred h---CCCEEEEEeC
Q psy11975 599 H---HENIRGVKDT 609 (786)
Q Consensus 599 e---iPNVVGIKDS 609 (786)
+ .|+|.-.=|.
T Consensus 162 ~~~~~~~~g~~~D~ 175 (278)
T 1i60_A 162 NTVNRDNVGLVLDS 175 (278)
T ss_dssp HHHCCTTEEEEEEH
T ss_pred HHhCCCCeeEEEEe
Confidence 3 4776555555
No 261
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=52.98 E-value=27 Score=36.74 Aligned_cols=36 Identities=3% Similarity=0.033 Sum_probs=29.8
Q ss_pred CCeEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCC
Q psy11975 514 QADLLKPQKH-TTTRATIDLTQKAAKAGANAALILCP 549 (786)
Q Consensus 514 RVPVIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPP 549 (786)
++||++=+.. .+.+|.+++|+.++++|+|+|.+..-
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~ 247 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNT 247 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence 5899986654 45678999999999999999999753
No 262
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=52.90 E-value=50 Score=32.50 Aligned_cols=116 Identities=9% Similarity=-0.004 Sum_probs=63.4
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEE-
Q psy11975 529 TIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRG- 605 (786)
Q Consensus 529 AIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVG- 605 (786)
..+.++.+.++|||.|.+..=.-..+. .+.+.+..+.+.+.. ++++++ +. -+++...++.+. -.++|
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~--~~~~~~~i~~i~~~~~~~~v~~-~~-------~t~~ea~~a~~~Gad~i~~ 159 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHD--GLDIASFIRQVKEKYPNQLLMA-DI-------STFDEGLVAHQAGIDFVGT 159 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTT--CCCHHHHHHHHHHHCTTCEEEE-EC-------SSHHHHHHHHHTTCSEEEC
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCC--CccHHHHHHHHHHhCCCCeEEE-eC-------CCHHHHHHHHHcCCCEEee
Confidence 456677889999999988653322221 112344455554444 566554 32 134444444322 23331
Q ss_pred ----E----E-eC--CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhccCCcccccccccccc
Q psy11975 606 ----V----K-DT--DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLVGCAGGINALSAVLG 656 (786)
Q Consensus 606 ----I----K-DS--Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~GAdG~Isg~aN~~P 656 (786)
+ | .. ++..+.++.+ . +-.+..-.|-. +.+...+..|++|++.|.+-+.|
T Consensus 160 ~v~g~~~~~~~~~~~~~~~i~~~~~-~-~ipvia~GGI~s~~~~~~~~~~Gad~v~vGsal~~p 221 (234)
T 1yxy_A 160 TLSGYTPYSRQEAGPDVALIEALCK-A-GIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAITRP 221 (234)
T ss_dssp TTTTSSTTSCCSSSCCHHHHHHHHH-T-TCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHHCH
T ss_pred eccccCCCCcCCCCCCHHHHHHHHh-C-CCCEEEECCCCCHHHHHHHHHCCCCEEEEchHHhCh
Confidence 1 2 12 6777777765 2 22344444443 34667778999999999865444
No 263
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=52.90 E-value=6.7 Score=33.24 Aligned_cols=54 Identities=22% Similarity=0.215 Sum_probs=39.9
Q ss_pred CCCCCCCceEEEecccC-CCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGY-PSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSL 410 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~-PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpF 410 (786)
..+|++||.|-||-.|- -..|++|.+.......|.|.|=- ++ -..+..++|+|.
T Consensus 10 ~~~f~vgd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKd-gT--~e~L~~kDIKp~ 64 (68)
T 2dig_A 10 SRKFADGEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKD-GT--ELELKENDIKSG 64 (68)
T ss_dssp CCSSCSSCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTT-SC--EEEEETTTEECC
T ss_pred ceEeecCCEEEEEccCCccceEEEEEEeccCCceEEEEecC-CC--EEEechhccccC
Confidence 45799999999995553 45789999887666778888766 53 344667777764
No 264
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=52.79 E-value=12 Score=38.30 Aligned_cols=54 Identities=15% Similarity=0.263 Sum_probs=42.3
Q ss_pred eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 520 PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 520 GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
-.+..+.+.+.+.++.+.+.|||++.+-- ..+++.+.+.+..++|.+ .++|+++
T Consensus 13 t~gDP~~~~t~~~~~~l~~~GaD~IelG~----S~g~t~~~~~~~v~~ir~-~~~Pivl 66 (234)
T 2f6u_A 13 TKLDPDRTNTDEIIKAVADSGTDAVMISG----TQNVTYEKARTLIEKVSQ-YGLPIVV 66 (234)
T ss_dssp EEECTTSCCCHHHHHHHHTTTCSEEEECC----CTTCCHHHHHHHHHHHTT-SCCCEEE
T ss_pred EeeCCCccccHHHHHHHHHcCCCEEEECC----CCCCCHHHHHHHHHHhcC-CCCCEEE
Confidence 34455555666778889999999999986 233568999999999987 8899887
No 265
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=52.78 E-value=25 Score=35.66 Aligned_cols=112 Identities=15% Similarity=0.092 Sum_probs=69.6
Q ss_pred EEEeCCCC--CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE--eCCCCcCCccCHH
Q psy11975 517 LLKPQKHT--TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIY--NNTFVTNIDISVD 592 (786)
Q Consensus 517 VIaGVGa~--ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLY--NiP~~TGv~LSpe 592 (786)
+.++..+. ....++++++.+.+.|+.+.+.+.|.. + ++..+.+.+.-.+.+++. -+|+..|..+-+.
T Consensus 89 itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~t------p---~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~ 159 (227)
T 1tqx_A 89 LTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKT------D---VQKLVPILDTNLINTVLVMTVEPGFGGQSFMHD 159 (227)
T ss_dssp EEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTS------C---GGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGG
T ss_pred EEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCC------c---HHHHHHHhhcCCcCEEEEeeeccCCCCcccchH
Confidence 34455443 588889988899999999999886642 2 223344444112444433 3488888777777
Q ss_pred HHHHHHhCCCEEEEEeCCHHHHHHHHhhcCCCCEEEEeCCcc-hhhhhhccCCcccccccccc
Q psy11975 593 TLVKLAHHENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAG-YLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 593 lL~rLAeiPNVVGIKDSDl~ri~~ll~~~~~~df~Vf~G~De-lLL~aL~~GAdG~Isg~aN~ 654 (786)
.+.++. ++++++ .+-.+.|-.|-+. .+-....+|++.++.|.+-+
T Consensus 160 ~l~ki~--------------~lr~~~---~~~~I~VdGGI~~~ti~~~~~aGAd~~V~GsaIf 205 (227)
T 1tqx_A 160 MMGKVS--------------FLRKKY---KNLNIQVDGGLNIETTEISASHGANIIVAGTSIF 205 (227)
T ss_dssp GHHHHH--------------HHHHHC---TTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHH
T ss_pred HHHHHH--------------HHHHhc---cCCeEEEECCCCHHHHHHHHHcCCCEEEEeHHHh
Confidence 666662 223332 1234556666654 45667789999999997643
No 266
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=52.39 E-value=44 Score=37.46 Aligned_cols=105 Identities=15% Similarity=0.151 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHcCCCEEEEc-CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEE
Q psy11975 528 ATIDLTQKAAKAGANAALIL-CPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRG 605 (786)
Q Consensus 528 EAIELAr~Ae~aGADAVmVi-PPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVG 605 (786)
+..++|+.+++. |.|+.++ -|.||..+ .+|.++|.+++++||+--|+ -+++-.+.++... -..+-
T Consensus 69 ~~~~iA~~y~~~-A~~IsvLTd~~~F~gs------~~dL~~vr~~v~lPvLrKDF------I~d~~Qi~ea~~~GAD~IL 135 (452)
T 1pii_A 69 DPARIAAIYKHY-ASAISVLTDEKYFQGS------FNFLPIVSQIAPQPILCKDF------IIDPYQIYLARYYQADACL 135 (452)
T ss_dssp CHHHHHHHHTTT-CSEEEEECCSTTTCCC------TTHHHHHHHHCCSCEEEESC------CCSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHhh-CcEEEEEecccccCCC------HHHHHHHHHhcCCCeEEEec------cCCHHHHHHHHHcCCCEEE
Confidence 667888888887 9999885 47788776 57888898899999987663 3555566665444 34566
Q ss_pred EEeC--CHHHHHHHHhhcCCCCEEEEeC-Cc-chhhhhhccCCc
Q psy11975 606 VKDT--DNIKLANMANQTKDLNFSVFAG-SA-GYLLSGLLVGCA 645 (786)
Q Consensus 606 IKDS--Dl~ri~~ll~~~~~~df~Vf~G-~D-elLL~aL~~GAd 645 (786)
+--+ +...+.++++....-+..++.- ++ +-+..++.+|++
T Consensus 136 Li~a~l~~~~l~~l~~~a~~lgm~~LvEvh~~eE~~~A~~lga~ 179 (452)
T 1pii_A 136 LMLSVLDDDQYRQLAAVAHSLEMGVLTEVSNEEEQERAIALGAK 179 (452)
T ss_dssp EETTTCCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHTTCS
T ss_pred EEcccCCHHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHCCCC
Confidence 6655 4444444433211123333322 22 224455666664
No 267
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=52.33 E-value=46 Score=33.17 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=30.5
Q ss_pred HHHHHHHhhcCCCCEEEEeCCc----chhhhhhccCCccccccccccccHHHHHHHHHH
Q psy11975 612 IKLANMANQTKDLNFSVFAGSA----GYLLSGLLVGCAGGINALSAVLGGPICELYDLA 666 (786)
Q Consensus 612 ~ri~~ll~~~~~~df~Vf~G~D----elLL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~ 666 (786)
..+.++++.. ..++.++.|.. +........|+||++.|.+-+-++-+.++.+.+
T Consensus 158 ~~~~~~ir~~-~~~~~ii~ggGI~~~~~~~~~~~~gaDgvlVGsAi~~~~d~~~~~~~l 215 (219)
T 2h6r_A 158 EGTVRAVKEI-NKDVKVLCGAGISKGEDVKAALDLGAEGVLLASGVVKAKNVEEAIREL 215 (219)
T ss_dssp HHHHHHHHHH-CTTCEEEECSSCCSHHHHHHHHTTTCCCEEESHHHHTCSSHHHHHHHH
T ss_pred HHHHHHHHhc-cCCCeEEEEeCcCcHHHHHHHhhCCCCEEEEcHHHhCcccHHHHHHHH
Confidence 3444444432 23566665553 223335678999999998766555455544443
No 268
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=52.07 E-value=28 Score=37.53 Aligned_cols=104 Identities=8% Similarity=0.037 Sum_probs=70.2
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.+++++=+ ++.+.++++++++..++.|++.+ --|+ .+. -++.+++|.+++++||+.=. ...+++
T Consensus 194 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~iPIa~dE------~~~~~~ 258 (391)
T 2qgy_A 194 ELPLMLDLAVPEDLDQTKSFLKEVSSFNPYWI--EEPV--DGE-----NISLLTEIKNTFNMKVVTGE------KQSGLV 258 (391)
T ss_dssp SSCEEEECCCCSCHHHHHHHHHHHGGGCCSEE--ECSS--CTT-----CHHHHHHHHHHCSSCEEECT------TCCSHH
T ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHhcCCCeE--eCCC--Chh-----hHHHHHHHHhhCCCCEEEcC------CcCCHH
Confidence 45666533 45689999999999999999864 3443 121 25677888888899988643 345688
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-.++-+|-. .+....++.+....-++.++.|.
T Consensus 259 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~~~ 303 (391)
T 2qgy_A 259 HFRELISRNAADIFNPDISGMGGLIDIIEISNEASNNGIFISPHC 303 (391)
T ss_dssp HHHHHHHTTCCSEECCBTTTSSCHHHHHHHHHHHHHTTCEECCBC
T ss_pred HHHHHHHcCCCCEEEECcchhCCHHHHHHHHHHHHHCCCEEeccC
Confidence 8888884 4689999998 66655554432222356665554
No 269
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=51.96 E-value=1e+02 Score=32.37 Aligned_cols=153 Identities=10% Similarity=0.147 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCEEEEcCCCC-----CCCCCCHHHHHHHHHHHHhcC---CCCEE-----EEeCCCCcCCccCHHHHHH
Q psy11975 530 IDLTQKAAKAGANAALILCPYY-----FQKKMTEDLIYEHFISVADNS---PIPVI-----IYNNTFVTNIDISVDTLVK 596 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY-----~kps~S~eeLv~YFraIAeAt---dLPIi-----LYNiP~~TGv~LSpelL~r 596 (786)
.+-++.|.++|+|.|.+..+.. .+...+.++.++-+.++.+.+ ++.+. .|.+|..+ ..+++.+.+
T Consensus 84 ~~~i~~a~~~g~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~--~~~~~~~~~ 161 (307)
T 1ydo_A 84 QRGLENALEGGINEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK--DVPIEQVIR 161 (307)
T ss_dssp HHHHHHHHHHTCSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB--CCCHHHHHH
T ss_pred HHhHHHHHhCCcCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC--CCCHHHHHH
Q ss_pred HHhC-----CCEEEEEeC----CHHHHHHHHhhcCCCCE----EEEeCCcch------hhhhhccCC---ccccc-----
Q psy11975 597 LAHH-----ENIRGVKDT----DNIKLANMANQTKDLNF----SVFAGSAGY------LLSGLLVGC---AGGIN----- 649 (786)
Q Consensus 597 LAei-----PNVVGIKDS----Dl~ri~~ll~~~~~~df----~Vf~G~Del------LL~aL~~GA---dG~Is----- 649 (786)
+++. ...+.|+|+ .+.++.++++ .....+ --+-+++.. .+.++.+|+ ++.+.
T Consensus 162 ~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~-~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGec 240 (307)
T 1ydo_A 162 LSEALFEFGISELSLGDTIGAANPAQVETVLE-ALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGC 240 (307)
T ss_dssp HHHHHHHHTCSCEEEECSSCCCCHHHHHHHHH-HHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEE
T ss_pred HHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHH-HHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCC
Q ss_pred -----cccccccHHHHHHHHHHH---cCCHHHHHHHHHHhhhhH
Q psy11975 650 -----ALSAVLGGPICELYDLAK---AGKWEEAMKLQHRLVKPD 685 (786)
Q Consensus 650 -----g~aN~~Pel~vaL~eA~~---aGD~eeAreLQ~rL~pLi 685 (786)
..+|..-|.++.+++... .=|+++-.++-+.+..+.
T Consensus 241 p~a~graGN~~~E~lv~~L~~~g~~t~idl~~L~~~~~~v~~~~ 284 (307)
T 1ydo_A 241 PYAPGSSGNAATEDIVYMLEQMDIKTNVKLEKLLSAAKWIEEKM 284 (307)
T ss_dssp TTEEEEECBCBHHHHHHHHHHTTCBCCCCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCChhHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
No 270
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=51.73 E-value=46 Score=35.33 Aligned_cols=130 Identities=15% Similarity=0.071 Sum_probs=74.1
Q ss_pred CCeEEEeCCCCCH-HHHHHHHHHHHHcCCCEEEEcCCCCC-----------CCCCCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 514 QADLLKPQKHTTT-RATIDLTQKAAKAGANAALILCPYYF-----------QKKMTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 514 RVPVIaGVGa~ST-~EAIELAr~Ae~aGADAVmViPPyY~-----------kps~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
++||++|+.+.+. ...=.+.+..+++|+.++ +=-|... ...++-+..++..+. |...++--+.|-
T Consensus 94 ~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~-A~~~gL~Ti~~v- 170 (286)
T 2p10_A 94 HTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAE-AHKLDLLTTPYV- 170 (286)
T ss_dssp SSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHH-HHHTTCEECCEE-
T ss_pred CCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHH-HHHCCCeEEEec-
Confidence 6899999887653 344455588889999999 4444110 011235555555553 455566655554
Q ss_pred CCCcCCccCHHHHHHHHh---------CC----CEEEEEeC-C----HHHHHHHHhh--cCCCCEEEEeCCc-----chh
Q psy11975 582 TFVTNIDISVDTLVKLAH---------HE----NIRGVKDT-D----NIKLANMANQ--TKDLNFSVFAGSA-----GYL 636 (786)
Q Consensus 582 P~~TGv~LSpelL~rLAe---------iP----NVVGIKDS-D----l~ri~~ll~~--~~~~df~Vf~G~D-----elL 636 (786)
.+++..+.+++ .| ..+|.+-. + .+.++++.+. ..++++.|+++.. +-.
T Consensus 171 -------~~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv 243 (286)
T 2p10_A 171 -------FSPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDA 243 (286)
T ss_dssp -------CSHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHH
T ss_pred -------CCHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHH
Confidence 45666666652 23 46677655 3 3344443321 2478888888762 234
Q ss_pred hhhhcc--CCccccccccc
Q psy11975 637 LSGLLV--GCAGGINALSA 653 (786)
Q Consensus 637 L~aL~~--GAdG~Isg~aN 653 (786)
...+.. |++|++++.+-
T Consensus 244 ~~~l~~t~G~~G~~gASsi 262 (286)
T 2p10_A 244 RFILDSCQGCHGFYGASSM 262 (286)
T ss_dssp HHHHHHCTTCCEEEESHHH
T ss_pred HHHHhcCCCccEEEeehhh
Confidence 556666 99999999763
No 271
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=51.39 E-value=1.9e+02 Score=30.68 Aligned_cols=127 Identities=11% Similarity=0.066 Sum_probs=72.3
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH----hC-CCEE
Q psy11975 530 IDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA----HH-ENIR 604 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA----ei-PNVV 604 (786)
.+.++.|.++|+|.+.+..|.-. .+.+.++.+. +...++.+.++=. .....+++.+.+++ +. ..++
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~-----~~~~~~~i~~-ak~~G~~v~~~~~---~a~~~~~e~~~~ia~~~~~~Ga~~i 166 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTE-----ADVSKQHIEY-ARNLGMDTVGFLM---MSHMIPAEKLAEQGKLMESYGATCI 166 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTC-----GGGGHHHHHH-HHHHTCEEEEEEE---STTSSCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHhCCcCEEEEEEeccH-----HHHHHHHHHH-HHHCCCEEEEEEE---eCCCCCHHHHHHHHHHHHHCCCCEE
Confidence 35677788889999988543211 2333333333 3344676665531 12345778777776 34 6899
Q ss_pred EEEeC----CHHHHHHHHh---hcCCCCEEE-EeCCcc------hhhhhhccCC---cccccc----ccccccHHHHHHH
Q psy11975 605 GVKDT----DNIKLANMAN---QTKDLNFSV-FAGSAG------YLLSGLLVGC---AGGINA----LSAVLGGPICELY 663 (786)
Q Consensus 605 GIKDS----Dl~ri~~ll~---~~~~~df~V-f~G~De------lLL~aL~~GA---dG~Isg----~aN~~Pel~vaL~ 663 (786)
.++|+ .+..+.++++ +..++++.+ +-++|. ..+.++.+|+ +|.+.| ++|..-+.++..+
T Consensus 167 ~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG~~aGN~~le~lv~~L 246 (345)
T 1nvm_A 167 YMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMGAGAGNAPLEVFIAVA 246 (345)
T ss_dssp EEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred EECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhccCCccCcCHHHHHHHH
Confidence 99999 5555555443 223224443 334442 2456777886 455555 4566666666666
Q ss_pred HH
Q psy11975 664 DL 665 (786)
Q Consensus 664 eA 665 (786)
+.
T Consensus 247 ~~ 248 (345)
T 1nvm_A 247 ER 248 (345)
T ss_dssp HH
T ss_pred Hh
Confidence 64
No 272
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=51.11 E-value=11 Score=38.95 Aligned_cols=122 Identities=16% Similarity=0.084 Sum_probs=61.6
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHH
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTL 594 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL 594 (786)
+|+-++.--.+..+ .++.+.++|||.+.+..= .. +.+.+..+.| ...++-+.+==+|.. - .+.+
T Consensus 87 ~~ldvHLmv~~p~~---~i~~~~~aGAd~itvH~E---a~----~~~~~~i~~i-r~~G~k~Gvalnp~T-p----~e~l 150 (246)
T 3inp_A 87 AGMDVHLMVKPVDA---LIESFAKAGATSIVFHPE---AS----EHIDRSLQLI-KSFGIQAGLALNPAT-G----IDCL 150 (246)
T ss_dssp SCEEEEEECSSCHH---HHHHHHHHTCSEEEECGG---GC----SCHHHHHHHH-HTTTSEEEEEECTTC-C----SGGG
T ss_pred CeEEEEEeeCCHHH---HHHHHHHcCCCEEEEccc---cc----hhHHHHHHHH-HHcCCeEEEEecCCC-C----HHHH
Confidence 45555554444443 445566778887777521 11 1244444444 334554444444532 1 1222
Q ss_pred HHHHh----------CCCEEEEEeC--CHHHHHHHHhh--cCCCC--EEEEeCCc-chhhhhhccCCcccccccc
Q psy11975 595 VKLAH----------HENIRGVKDT--DNIKLANMANQ--TKDLN--FSVFAGSA-GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 595 ~rLAe----------iPNVVGIKDS--Dl~ri~~ll~~--~~~~d--f~Vf~G~D-elLL~aL~~GAdG~Isg~a 652 (786)
..+.. .|.+-|-|+- .+++++++.+. ..+.+ +.|=.|-. +.+.....+|++.++.|.+
T Consensus 151 ~~~l~~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~ti~~~~~aGAD~~V~GSa 225 (246)
T 3inp_A 151 KYVESNIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSA 225 (246)
T ss_dssp TTTGGGCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTTTHHHHHTTTCCEEEESHH
T ss_pred HHHHhcCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHHHHHHHHHcCCCEEEEehH
Confidence 22221 3566666655 34555544331 11333 44555554 3466778899999999965
No 273
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=51.09 E-value=21 Score=36.98 Aligned_cols=35 Identities=0% Similarity=-0.291 Sum_probs=28.5
Q ss_pred CCeEEEeCCC-CCHHHHHHHHHHHHHcC-CCEEEEcC
Q psy11975 514 QADLLKPQKH-TTTRATIDLTQKAAKAG-ANAALILC 548 (786)
Q Consensus 514 RVPVIaGVGa-~ST~EAIELAr~Ae~aG-ADAVmViP 548 (786)
.+||++-+.. .+.++..++++.++++| +|++.+..
T Consensus 160 ~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~ 196 (314)
T 2e6f_A 160 GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVN 196 (314)
T ss_dssp CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeC
Confidence 4688886554 46778889999999999 99998876
No 274
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=50.88 E-value=1.5e+02 Score=30.77 Aligned_cols=144 Identities=11% Similarity=0.043 Sum_probs=84.9
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-----CCCCCHHHHHHHHHHHHhcC---CCCEEE-----E
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYF-----QKKMTEDLIYEHFISVADNS---PIPVII-----Y 579 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~-----kps~S~eeLv~YFraIAeAt---dLPIiL-----Y 579 (786)
.++++.+.+ .+ .+.++.|.++|++.|++..+..- +...+.++.++-++++.+.+ ++.+-. |
T Consensus 75 ~~~~~~~l~--~~----~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~ 148 (302)
T 2ftp_A 75 PGVTYAALA--PN----LKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVL 148 (302)
T ss_dssp TTSEEEEEC--CS----HHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTT
T ss_pred CCCEEEEEe--CC----HHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEe
Confidence 356777666 22 45677788899999998543311 11124677777776666544 566642 3
Q ss_pred eCCCCcCCccCHHHHHHHH----hC-CCEEEEEeC----CHHHHHHHHhhc---CC-CCEEEEeCCcc------hhhhhh
Q psy11975 580 NNTFVTNIDISVDTLVKLA----HH-ENIRGVKDT----DNIKLANMANQT---KD-LNFSVFAGSAG------YLLSGL 640 (786)
Q Consensus 580 NiP~~TGv~LSpelL~rLA----ei-PNVVGIKDS----Dl~ri~~ll~~~---~~-~df~Vf~G~De------lLL~aL 640 (786)
..|.. + ..+++.+.+++ +. ...+.|+|+ .+..+.++++.. .+ -.+ .+-|++. ..+.++
T Consensus 149 ~~e~~-~-~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l-~~H~Hn~~Gla~An~laAv 225 (302)
T 2ftp_A 149 GCPYD-G-DVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERL-AGHFHDTYGQALANIYASL 225 (302)
T ss_dssp CBTTT-B-CCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGE-EEEEBCTTSCHHHHHHHHH
T ss_pred eCCcC-C-CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeE-EEEeCCCccHHHHHHHHHH
Confidence 44432 2 46788777776 33 578999999 566655555422 21 123 3555442 245677
Q ss_pred ccCC---ccccc----------cccccccHHHHHHHHH
Q psy11975 641 LVGC---AGGIN----------ALSAVLGGPICELYDL 665 (786)
Q Consensus 641 ~~GA---dG~Is----------g~aN~~Pel~vaL~eA 665 (786)
.+|+ ++.+. .++|..-+.++.+++.
T Consensus 226 ~aGa~~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~~ 263 (302)
T 2ftp_A 226 LEGIAVFDSSVAGLGGCPYAKGATGNVASEDVLYLLNG 263 (302)
T ss_dssp HTTCCEEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHHH
T ss_pred HhCCCEEEecccccCCCCCCCCCCCChhHHHHHHHHHh
Confidence 8887 45555 3566666666666554
No 275
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=50.79 E-value=49 Score=35.87 Aligned_cols=37 Identities=11% Similarity=0.173 Sum_probs=30.1
Q ss_pred CCeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEcCCC
Q psy11975 514 QADLLKPQK-HTTTRATIDLTQKAAKAGANAALILCPY 550 (786)
Q Consensus 514 RVPVIaGVG-a~ST~EAIELAr~Ae~aGADAVmViPPy 550 (786)
++||++=+. ..+.++..+.|+.++++|||+|.+..-.
T Consensus 220 ~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt 257 (367)
T 3zwt_A 220 RPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTT 257 (367)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCB
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 589998544 3456789999999999999999998644
No 276
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=50.72 E-value=34 Score=35.40 Aligned_cols=53 Identities=15% Similarity=0.027 Sum_probs=34.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEE
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSP-IPVIIY 579 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtd-LPIiLY 579 (786)
.+.++++++++.+.++|||.+.+....-. ++++++.+.++.|.+.++ +||.+.
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~---~~P~~~~~lv~~l~~~~~~~~l~~H 205 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGR---GTPDTVAAMLDAVLAIAPAHSLAGH 205 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSC---CCHHHHHHHHHHHHTTSCGGGEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 46677777777777777777766643322 246777777777776665 666554
No 277
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=50.68 E-value=23 Score=36.54 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=60.6
Q ss_pred CCCHHHHHHHHHhCCCCCccC-CCccccccCCCCCCCCC--CCCCccccCCCCeEEEeC----CCCCHHHHHHHHHHHHH
Q psy11975 466 SMPIQKRKSLLRKFPLWPELE-PSTSELKRSDRPMSVGP--RSVRPSEREWQADLLKPQ----KHTTTRATIDLTQKAAK 538 (786)
Q Consensus 466 sLT~dER~~Lle~~~~wve~~-a~~~e~~~~~~~~~~~~--r~v~veevaGRVPVIaGV----Ga~ST~EAIELAr~Ae~ 538 (786)
.++.++|.++++. ..+.. + |.-.+ ++...+ +.+.-....++..||+.- +..+.++.+++.+.+++
T Consensus 96 ~~~~~~~~~ll~~---~~~~g~~---d~iDv--El~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~ 167 (257)
T 2yr1_A 96 PLNEAEVRRLIEA---ICRSGAI---DLVDY--ELAYGERIADVRRMTEECSVWLVVSRHYFDGTPRKETLLADMRQAER 167 (257)
T ss_dssp SSCHHHHHHHHHH---HHHHTCC---SEEEE--EGGGTTHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH---HHHcCCC---CEEEE--ECCCChhHHHHHHHHHhCCCEEEEEecCCCCCcCHHHHHHHHHHHHh
Confidence 7899999999998 33211 0 00000 111111 011111135678888843 34567889999999999
Q ss_pred cCCCEEEEcCCCCCCCCCCHHHHHHHHHHHH---hcCCCCEEEEeCC
Q psy11975 539 AGANAALILCPYYFQKKMTEDLIYEHFISVA---DNSPIPVIIYNNT 582 (786)
Q Consensus 539 aGADAVmViPPyY~kps~S~eeLv~YFraIA---eAtdLPIiLYNiP 582 (786)
.|||-+=+....- +.+++.+.++... ...+.|++.|+.-
T Consensus 168 ~gaDivKia~~a~-----s~~D~l~ll~~~~~~~~~~~~P~I~~~MG 209 (257)
T 2yr1_A 168 YGADIAKVAVMPK-----SPEDVLVLLQATEEARRELAIPLITMAMG 209 (257)
T ss_dssp TTCSEEEEEECCS-----SHHHHHHHHHHHHHHHHHCSSCEEEEECT
T ss_pred cCCCEEEEEeccC-----CHHHHHHHHHHHHHHhccCCCCEEEEECC
Confidence 9999775543221 3555555554433 2347899999974
No 278
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=50.63 E-value=26 Score=35.96 Aligned_cols=122 Identities=15% Similarity=0.063 Sum_probs=80.0
Q ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCC-C--CEEEEeCCCCcCCcc----CHH
Q psy11975 521 QKHTTTRATIDLTQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVADNSP-I--PVIIYNNTFVTNIDI----SVD 592 (786)
Q Consensus 521 VGa~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAeAtd-L--PIiLYNiP~~TGv~L----Spe 592 (786)
.|...++.-+..++.|.+.|||.|-+..++-. +.. +.+.+.+-.++|.++++ . .+||. ++ .| +.+
T Consensus 74 ~G~~~~~~K~~E~~~Ai~~GAdEIDmVinig~lk~g-~~~~v~~ei~~v~~a~~~~~lKvIiE-----t~-~L~~~~t~e 146 (231)
T 3ndo_A 74 SGKHVPGIKATEAELAVAAGATEIDMVIDVGAALAG-DLDAVSADITAVRKAVRAATLKVIVE-----SA-ALLEFSGEP 146 (231)
T ss_dssp TCCSCHHHHHHHHHHHHHTTCSEEEEECCHHHHHTT-CHHHHHHHHHHHHHHTTTSEEEEECC-----HH-HHHHHTCHH
T ss_pred CCCCcHHHHHHHHHHHHHcCCCEEEEEeehHhhhcc-cHHHHHHHHHHHHHHccCCceEEEEE-----Cc-ccCCCCCHH
Confidence 45567888899999999999999988877633 333 58888999999999884 3 33333 23 46 778
Q ss_pred HHHHHHh---CCCEEEEEeC---------CHHHHHHHHhhcCCCC--EEEEeCCc--chhhhhhccCCc--ccccc
Q psy11975 593 TLVKLAH---HENIRGVKDT---------DNIKLANMANQTKDLN--FSVFAGSA--GYLLSGLLVGCA--GGINA 650 (786)
Q Consensus 593 lL~rLAe---iPNVVGIKDS---------Dl~ri~~ll~~~~~~d--f~Vf~G~D--elLL~aL~~GAd--G~Isg 650 (786)
.+.+.++ .-..-.||-+ .++.+..+.+ ..+++ +..-.|-- +.++..+.+|++ |..++
T Consensus 147 ei~~a~~ia~~aGADfVKTSTGf~~~~gAt~edv~lm~~-~v~~~v~VKaaGGIrt~~~a~~~i~aGa~RiGtS~g 221 (231)
T 3ndo_A 147 LLADVCRVARDAGADFVKTSTGFHPSGGASVQAVEIMAR-TVGERLGVKASGGIRTAEQAAAMLDAGATRLGLSGS 221 (231)
T ss_dssp HHHHHHHHHHHTTCSEEECCCSCCTTCSCCHHHHHHHHH-HHTTTSEEEEESSCCSHHHHHHHHHTTCSEEEESSH
T ss_pred HHHHHHHHHHHHCcCEEEcCCCCCCCCCCCHHHHHHHHH-HhCCCceEEEeCCCCCHHHHHHHHHhcchhcccchH
Confidence 7776653 3466677776 2234443333 23344 44455543 246777889998 76555
No 279
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=50.54 E-value=22 Score=36.66 Aligned_cols=56 Identities=11% Similarity=0.036 Sum_probs=43.4
Q ss_pred CCCeEEE--eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHh
Q psy11975 513 WQADLLK--PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVAD 570 (786)
Q Consensus 513 GRVPVIa--GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAe 570 (786)
+++||++ |+...+.++++++++.+.++||+++.+..-.+..++ .....+-+.++..
T Consensus 195 ~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~GvsvgraI~~~~d--p~~~~~~l~~~v~ 252 (263)
T 1w8s_A 195 GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRRD--ALKFARALAELVY 252 (263)
T ss_dssp TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHHHHTSTT--HHHHHHHHHHHHC
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehhhcCCcC--HHHHHHHHHHHHh
Confidence 3457665 555448999999999999999999999987777665 7777777666654
No 280
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=50.38 E-value=72 Score=33.87 Aligned_cols=101 Identities=12% Similarity=0.113 Sum_probs=68.7
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHH-HHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKA-AKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~A-e~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
.+++.+=+ ++.+.++++++++.. ++.|+ .+--|.. . .+.+++|.+++++||+.=. ...++
T Consensus 190 ~~~l~vDan~~~~~~~a~~~~~~l~~~~~i---~iE~P~~---~------~~~~~~l~~~~~iPI~~dE------~~~~~ 251 (371)
T 2ps2_A 190 DEFFIVDANGKLSVETALRLLRLLPHGLDF---ALEAPCA---T------WRECISLRRKTDIPIIYDE------LATNE 251 (371)
T ss_dssp TCEEEEECTTBCCHHHHHHHHHHSCTTCCC---EEECCBS---S------HHHHHHHHTTCCSCEEEST------TCCSH
T ss_pred CCEEEEECCCCcCHHHHHHHHHHHHhhcCC---cCcCCcC---C------HHHHHHHHhhCCCCEEeCC------CcCCH
Confidence 45666533 456899999999999 98887 4455542 3 4678888888899988643 23568
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
+.+.++.+ .-+++-+|-. .+....++.+....-++.++.|.
T Consensus 252 ~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (371)
T 2ps2_A 252 MSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQE 297 (371)
T ss_dssp HHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 88888863 5689999998 66555544332222356666553
No 281
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=50.32 E-value=39 Score=33.17 Aligned_cols=81 Identities=17% Similarity=0.031 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHH-HHHHHHHHhc---CCCCEEEEeCCCCcCCccCHHHHHHHHh-C-
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLI-YEHFISVADN---SPIPVIIYNNTFVTNIDISVDTLVKLAH-H- 600 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeL-v~YFraIAeA---tdLPIiLYNiP~~TGv~LSpelL~rLAe-i- 600 (786)
+...+.++.|+++||+.|.+.+...... ..+.+ ++.++++++. .++.|.+-|.+......-+++.+.+|.+ +
T Consensus 85 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~--~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 85 KKTEGLLRDAQGVGARALVLCPLNDGTI--VPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCSSBC--CCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEEccCCCchh--HHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC
Confidence 4566778888999999998876543222 24566 7777776654 4788888887522223346777777773 3
Q ss_pred CCEEEEEeC
Q psy11975 601 ENIRGVKDT 609 (786)
Q Consensus 601 PNVVGIKDS 609 (786)
|+|--.=|+
T Consensus 163 ~~~g~~~D~ 171 (272)
T 2q02_A 163 SPFKVLLDT 171 (272)
T ss_dssp CCCEEEEEH
T ss_pred cCeEEEEEc
Confidence 665444444
No 282
>2oem_A 2,3-diketo-5-methylthiopentyl-1-phosphate enolase; rubisco-like protein, isomerase; HET: KCX 1AE; 1.70A {Geobacillus kaustophilus} PDB: 2oel_A* 2oek_A* 2oej_A
Probab=49.96 E-value=48 Score=36.81 Aligned_cols=113 Identities=13% Similarity=0.085 Sum_probs=64.3
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhc--CCCCEEEEeCCC-----
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADN--SPIPVIIYNNTF----- 583 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeA--tdLPIiLYNiP~----- 583 (786)
++.+.--.++|++ +.+|.++.|+.|.++|+.++|+-. +..+ - .-.+.+++. .++||.++-.=.
T Consensus 204 TGe~k~~~~NiT~-~~~em~~Ra~~a~e~G~~~~mvd~---~~~G--~----~a~~~l~~~~~~~~~lh~HrA~hg~~~r 273 (413)
T 2oem_A 204 TGKRTLYAVNLTG-KTFALKDKAKRAAELGADVLLFNV---FAYG--L----DVLQALREDEEIAVPIMAHPAFSGAVTP 273 (413)
T ss_dssp HSCCCEEEEECCS-CGGGHHHHHHHHHHTTCSEEEECG---GGSC--H----HHHHHHHHCTTTCCCEEECCTTGGGTSS
T ss_pred HCCcceeeCcCCC-CHHHHHHHHHHHHHhCCCeEEEee---eccC--h----HHHHHHHhhccCCceEEeccccceeecc
Confidence 3334445679994 999999999999999999999863 2222 1 123334444 567766653310
Q ss_pred CcCCccCHHHH-H---HHHh-----CCCEEEEEeC-CHHHHHHH---Hhhc---CCCCEEEEeCCcc
Q psy11975 584 VTNIDISVDTL-V---KLAH-----HENIRGVKDT-DNIKLANM---ANQT---KDLNFSVFAGSAG 634 (786)
Q Consensus 584 ~TGv~LSpelL-~---rLAe-----iPNVVGIKDS-Dl~ri~~l---l~~~---~~~df~Vf~G~De 634 (786)
.....++...+ . ||+. .++++| |.. +.+.+..+ ++.. ..+-+-|.+|.-.
T Consensus 274 ~~~~Gi~~~vll~Kl~Rl~G~D~ih~gt~~G-K~~g~~~~~~~~~~~~~~~w~~~~~~~PV~SGGih 339 (413)
T 2oem_A 274 SEFYGVAPSLWLGKLLRLAGADFVLFPSPYG-SVALEREQALGIARALTDDQEPFARAFPVPSAGIH 339 (413)
T ss_dssp CSSSSBCHHHHTTHHHHHHTCSEEEEECSSS-SSCCCHHHHHHHHHHHHCTTSSSCCCEEEEESSCC
T ss_pred CCCCCcchHHHHHHHHHHcCCCeeecCCcCC-CcCCCHHHHHHHHHHHhccccCCCCcCCCCccCcc
Confidence 01123566555 4 4442 255544 666 54444333 3311 2345778887643
No 283
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=49.92 E-value=3.4 Score=45.61 Aligned_cols=23 Identities=13% Similarity=0.004 Sum_probs=12.8
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGAN 542 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGAD 542 (786)
+|+|..+. -....++.|..+||.
T Consensus 218 ~ViG~~G~---vG~~A~~~a~~lGa~ 240 (394)
T 2qrj_A 218 LIIGALGR---CGSGAIDLLHKVGIP 240 (394)
T ss_dssp EEETTTSH---HHHHHHHHHHHTTCC
T ss_pred EEEcCCCH---HHHHHHHHHHhCCCC
Confidence 55566342 233445566778973
No 284
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=49.85 E-value=95 Score=32.83 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=57.3
Q ss_pred CCeEEEeCCC-CCHHHHHHHHHHHHHc----CCCEEEEcCCCCCC-CC--------CCHHHHHHHHHHHHhcCCCCEEE-
Q psy11975 514 QADLLKPQKH-TTTRATIDLTQKAAKA----GANAALILCPYYFQ-KK--------MTEDLIYEHFISVADNSPIPVII- 578 (786)
Q Consensus 514 RVPVIaGVGa-~ST~EAIELAr~Ae~a----GADAVmViPPyY~k-ps--------~S~eeLv~YFraIAeAtdLPIiL- 578 (786)
++-||+|-.. .+.+.+++.|++.+++ |+.+|+-. +|.| |. +..++=++.++++++..++|++-
T Consensus 17 ~~~vIaGPCsie~~~~~~e~A~~lk~~~~~~~~~~v~k~--~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~~te 94 (288)
T 3tml_A 17 PFFLIAGTCVVESEQMTIDTAGRLKEICEKLNVPFIYKS--SYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPVLTD 94 (288)
T ss_dssp CCEEEEECSBCCCHHHHHHHHHHHHHHHHHHTCCEEEEC--BC--------------CHHHHHHHHHHHHHHHCCCEEEE
T ss_pred ceEEEEeCCcCCCHHHHHHHHHHHHHHHHHcCCCEEEec--ccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEE
Confidence 4779998665 5778888888877765 88877643 3433 21 12345567788899888999873
Q ss_pred ----------------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 ----------------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 ----------------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|-+|++ .--..+++.++++...-+++|-.
T Consensus 95 v~d~~~v~~l~~~vd~lkIgA~--~~~n~~LLr~~a~~gkPVilK~G 139 (288)
T 3tml_A 95 VHSIDEIEQVASVVDVLQTPAF--LCRQTDFIHACARSGKPVNIKKG 139 (288)
T ss_dssp CCSGGGHHHHHHHCSEEEECGG--GTTCHHHHHHHHTSSSCEEEECC
T ss_pred eCCHHHHHHHHHhCCEEEECcc--cccCHHHHHHHHccCCcEEEeCC
Confidence 333322 11234466666666666777765
No 285
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=49.31 E-value=3.5 Score=42.33 Aligned_cols=7 Identities=14% Similarity=0.126 Sum_probs=2.7
Q ss_pred HHHHHHH
Q psy11975 558 EDLIYEH 564 (786)
Q Consensus 558 ~eeLv~Y 564 (786)
.++|.+.
T Consensus 143 ae~L~~~ 149 (286)
T 1jr2_A 143 AEKLAEY 149 (286)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 3334333
No 286
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=49.17 E-value=39 Score=37.51 Aligned_cols=38 Identities=3% Similarity=0.017 Sum_probs=30.3
Q ss_pred CCe-EEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCCCC
Q psy11975 514 QAD-LLKPQKH-TTTRATIDLTQKAAKAGANAALILCPYY 551 (786)
Q Consensus 514 RVP-VIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPPyY 551 (786)
++| |++=+.- .+.++..++|+.++++|||+|.+..-..
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~ 307 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTT 307 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBS
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCc
Confidence 578 7875544 3456899999999999999999998654
No 287
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=49.17 E-value=95 Score=32.82 Aligned_cols=93 Identities=16% Similarity=0.115 Sum_probs=57.8
Q ss_pred CCeEEEe-CCCCCHHHHHHHHHHHHHc----CCCEEEEc--------CCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE--
Q psy11975 514 QADLLKP-QKHTTTRATIDLTQKAAKA----GANAALIL--------CPYYFQKKMTEDLIYEHFISVADNSPIPVII-- 578 (786)
Q Consensus 514 RVPVIaG-VGa~ST~EAIELAr~Ae~a----GADAVmVi--------PPyY~kps~S~eeLv~YFraIAeAtdLPIiL-- 578 (786)
++-||+| +.-.+.+.+++.|++.+++ |...|+-. .|+-|+. +..++=++.++++++..++|++-
T Consensus 20 ~~~viaGPCsie~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G-~g~~~GL~~L~~~~~e~Glp~~Tev 98 (285)
T 3sz8_A 20 PFVLFGGINVLESLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRG-VGLDEGLKIFAEVKARFGVPVITDV 98 (285)
T ss_dssp CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCC-SCHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred ceEEEEeCCcCCCHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCC-cCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 5789998 4556888888888888875 46666543 2332321 12455567788899888999873
Q ss_pred ---------------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 ---------------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 ---------------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|-+|++ .--..+++.++++...-+++|-.
T Consensus 99 ~d~~~v~~l~~~vd~lqIgA~--~~~n~~LLr~va~~gkPVilK~G 142 (285)
T 3sz8_A 99 HEAEQAAPVAEIADVLQVPAF--LARQTDLVVAIAKAGKPVNVKKP 142 (285)
T ss_dssp CSGGGHHHHHTTCSEEEECGG--GTTCHHHHHHHHHTSSCEEEECC
T ss_pred CCHHHHHHHHHhCCEEEECcc--ccCCHHHHHHHHccCCcEEEeCC
Confidence 222221 11234466666666666667765
No 288
>3k9f_C DNA topoisomerase 4 subunit B; quinolone, topoisomerase, protein-DNA cleavage complex; HET: DNA LFX; 2.90A {Streptococcus pneumoniae} PDB: 3fof_C* 3foe_C* 3ksa_C* 3ksb_C* 3ltn_C* 3rad_C* 3rae_C* 3raf_C*
Probab=48.28 E-value=3.8 Score=43.10 Aligned_cols=9 Identities=11% Similarity=-0.053 Sum_probs=5.6
Q ss_pred CCCCCcccc
Q psy11975 370 YPSWPGKLI 378 (786)
Q Consensus 370 ~PwWPg~V~ 378 (786)
|-+||..|-
T Consensus 144 ~r~~p~Li~ 152 (268)
T 3k9f_C 144 YRYMRPLVE 152 (268)
T ss_dssp HHTSHHHHH
T ss_pred HHHhHHHHh
Confidence 456776664
No 289
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=48.18 E-value=9.3 Score=38.48 Aligned_cols=65 Identities=15% Similarity=0.063 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHh
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAH 599 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAe 599 (786)
.+.+++++.+++.|||++.+..+...... .....++.+.|++.+++||++-. | --+++.+.++.+
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~--~g~~~~~i~~i~~~~~iPvi~~g-----g-i~~~~~i~~~~~ 94 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLTTLPIIASG-----G-AGKMEHFLEAFL 94 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCS--SCCCHHHHHHHGGGCCSCEEEES-----C-CCSTHHHHHHHH
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCC--CcccHHHHHHHHHhcCCCEEEEC-----C-CCCHHHHHHHHH
Confidence 36788999999999999999876532211 11136788889999999999842 2 224455665553
No 290
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=48.02 E-value=3.8 Score=43.53 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=9.7
Q ss_pred ceEEEecccCCCCCcccc
Q psy11975 361 DLVWGSVKGYPSWPGKLI 378 (786)
Q Consensus 361 DLVWaKvkG~PwWPg~V~ 378 (786)
|+|.. -.+..||+.+.
T Consensus 113 Div~~--~~~~~~~~~~~ 128 (374)
T 2xci_A 113 KALIV--VEREFWPSLII 128 (374)
T ss_dssp SEEEE--ESCCCCHHHHH
T ss_pred CEEEE--ECccCcHHHHH
Confidence 56542 25678887654
No 291
>3lx2_A DNA polymerase sliding clamp 2; PCNA, DNA processivity factor, trimer, toroidal, DNA replica DNA-binding, DNA binding protein; HET: DNA; 2.40A {Thermococcus kodakarensis}
Probab=47.93 E-value=3.8 Score=41.84 Aligned_cols=12 Identities=67% Similarity=1.077 Sum_probs=0.5
Q ss_pred cccCCCCCCCCC
Q psy11975 198 RSYGRSHHHSHH 209 (786)
Q Consensus 198 ~~~~~~~~~~~~ 209 (786)
+.-||+|||+||
T Consensus 248 ~~~~~~~~~~~~ 259 (259)
T 3lx2_A 248 VEEGRSHHHHHH 259 (259)
T ss_dssp C-----------
T ss_pred cCCCccccccCC
Confidence 456899887654
No 292
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=47.54 E-value=37 Score=36.21 Aligned_cols=104 Identities=11% Similarity=0.025 Sum_probs=70.0
Q ss_pred CCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC-
Q psy11975 513 WQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS- 590 (786)
Q Consensus 513 GRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS- 590 (786)
..+++++=+ ++.+.++++++++..++.|++.+ --|+ .+. -.+.+++|.+++++||+.=. ...+
T Consensus 199 ~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~~-----~~~~~~~l~~~~~iPIa~dE------~~~~~ 263 (382)
T 1rvk_A 199 PDIRLMIDAFHWYSRTDALALGRGLEKLGFDWI--EEPM--DEQ-----SLSSYKWLSDNLDIPVVGPE------SAAGK 263 (382)
T ss_dssp TTSEEEEECCTTCCHHHHHHHHHHHHTTTCSEE--ECCS--CTT-----CHHHHHHHHHHCSSCEEECS------SCSSH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--eCCC--Chh-----hHHHHHHHHhhCCCCEEEeC------CccCc
Confidence 356666633 45689999999999999999854 4453 121 25667888888899988643 3456
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
++.+.++.+ .-+++-+|-. .+....++.+....-++.+..|
T Consensus 264 ~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 264 HWHRAEWIKAGACDILRTGVNDVGGITPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp HHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHcCCCCEEeeCchhcCCHHHHHHHHHHHHHcCCeEeec
Confidence 788888874 4689999998 5655554443222235666665
No 293
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=47.41 E-value=1.9e+02 Score=29.91 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=76.5
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCC-----CCCCCHHHHHHHHHHHHhc---CCCCEEEE-----eCCCCcCCccCHHHHHH
Q psy11975 530 IDLTQKAAKAGANAALILCPYYF-----QKKMTEDLIYEHFISVADN---SPIPVIIY-----NNTFVTNIDISVDTLVK 596 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY~-----kps~S~eeLv~YFraIAeA---tdLPIiLY-----NiP~~TGv~LSpelL~r 596 (786)
.+-++.|.++|+|.|.+..+..- +...+.++.++-+.++.+. .++.+.+| .+|.. + ..+++.+.+
T Consensus 83 ~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~-~-~~~~~~~~~ 160 (298)
T 2cw6_A 83 LKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYE-G-KISPAKVAE 160 (298)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTT-B-SCCHHHHHH
T ss_pred HHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcC-C-CCCHHHHHH
Confidence 34577788899999888654320 0112355555555555443 46777654 33421 2 357777776
Q ss_pred HH----hC-CCEEEEEeC----CHHHHHHHHhh---cCC-CCEEEEeCCc-ch----hhhhhccCCc---cccc------
Q psy11975 597 LA----HH-ENIRGVKDT----DNIKLANMANQ---TKD-LNFSVFAGSA-GY----LLSGLLVGCA---GGIN------ 649 (786)
Q Consensus 597 LA----ei-PNVVGIKDS----Dl~ri~~ll~~---~~~-~df~Vf~G~D-el----LL~aL~~GAd---G~Is------ 649 (786)
++ +. ...+.|+|+ .+.++.++++. ..+ -.+.+-+=+| ++ .+.++.+|++ +.+.
T Consensus 161 ~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp 240 (298)
T 2cw6_A 161 VTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMALQMGVSVVDSSVAGLGGCP 240 (298)
T ss_dssp HHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCT
T ss_pred HHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEeecccccCCC
Confidence 65 33 679999999 66666555442 221 2355433222 12 3567778874 4455
Q ss_pred ----cccccccHHHHHHHHHH
Q psy11975 650 ----ALSAVLGGPICELYDLA 666 (786)
Q Consensus 650 ----g~aN~~Pel~vaL~eA~ 666 (786)
.++|..-+.++.+++..
T Consensus 241 ~a~g~aGN~~~E~lv~~l~~~ 261 (298)
T 2cw6_A 241 YAQGASGNLATEDLVYMLEGL 261 (298)
T ss_dssp TSCSSCCBCBHHHHHHHHHHH
T ss_pred CCCCCcCChhHHHHHHHHHhc
Confidence 35666666666666543
No 294
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=47.05 E-value=42 Score=36.20 Aligned_cols=106 Identities=11% Similarity=-0.002 Sum_probs=70.3
Q ss_pred CCCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
+..+++++=+ ++.+.++++++++..++.|++.+ --|. .+. -++.+++|.+++++||+.=.. ..+
T Consensus 213 G~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~~-----~~~~~~~l~~~~~iPIa~dE~------~~~ 277 (407)
T 2o56_A 213 GPDVDIIAEMHAFTDTTSAIQFGRMIEELGIFYY--EEPV--MPL-----NPAQMKQVADKVNIPLAAGER------IYW 277 (407)
T ss_dssp CTTSEEEEECTTCSCHHHHHHHHHHHGGGCCSCE--ECSS--CSS-----SHHHHHHHHHHCCSCEEECTT------CCH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE--eCCC--Chh-----hHHHHHHHHHhCCCCEEeCCC------cCC
Confidence 3456676633 45689999999999999998853 3443 121 256788888889999987442 345
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
++.+.++.+ .-+++-+|-. .+....++.+....-++.++.+.
T Consensus 278 ~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~ 324 (407)
T 2o56_A 278 RWGYRPFLENGSLSVIQPDICTCGGITEVKKICDMAHVYDKTVQIHV 324 (407)
T ss_dssp HHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 788888874 4689999988 45554444432223455655543
No 295
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=46.87 E-value=6.4 Score=35.60 Aligned_cols=8 Identities=75% Similarity=1.348 Sum_probs=3.8
Q ss_pred CCCCCCCC
Q psy11975 201 GRSHHHSH 208 (786)
Q Consensus 201 ~~~~~~~~ 208 (786)
|.||||.|
T Consensus 2 ~~~~~~~~ 9 (113)
T 1tvm_A 2 GSSHHHHH 9 (113)
T ss_dssp CSSCCCSS
T ss_pred Ccccccch
Confidence 44555433
No 296
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=46.29 E-value=21 Score=35.65 Aligned_cols=66 Identities=15% Similarity=0.040 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH 600 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei 600 (786)
.+.+++|+.++++|||.+.+....-.... ...-.++.++|++++++||++= |---+++.+.++.+.
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~--~~~~~~~i~~i~~~~~ipvi~~------Ggi~~~~~~~~~l~~ 100 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTK--SGYDTEMIRFVRPLTTLPIIAS------GGAGKMEHFLEAFLR 100 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCS--SCCCHHHHHHHGGGCCSCEEEE------SCCCSHHHHHHHHHT
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCC--CcccHHHHHHHHHhCCCCEEEe------CCCCCHHHHHHHHHc
Confidence 47889999999999999988653211100 0112567889999999999872 333467888777754
No 297
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=46.29 E-value=34 Score=36.76 Aligned_cols=82 Identities=1% Similarity=-0.070 Sum_probs=49.7
Q ss_pred cCCCCeEEEeCC-------CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 511 REWQADLLKPQK-------HTTTRATIDLTQKAAKAGANAALILCPYYFQKK--MTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 511 vaGRVPVIaGVG-------a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps--~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
++.++||.+=++ +.+.++++++++..+++ +|++-+....+.... ..+..-.++.+.|.+++++||+.=
T Consensus 207 vg~d~pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~-- 283 (343)
T 3kru_A 207 WPENKPIFVRVSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAV-- 283 (343)
T ss_dssp SCTTSCEEEEEECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEE--
T ss_pred CCccCCeEEEeechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCccccee--
Confidence 444567776332 45789999999999999 999998633221100 001112455666666677887642
Q ss_pred CCCcCCccCHHHHHHHHh
Q psy11975 582 TFVTNIDISVDTLVKLAH 599 (786)
Q Consensus 582 P~~TGv~LSpelL~rLAe 599 (786)
|.--+++...++.+
T Consensus 284 ----Ggi~t~e~Ae~~l~ 297 (343)
T 3kru_A 284 ----GLITTQELAEEILS 297 (343)
T ss_dssp ----SSCCCHHHHHHHHH
T ss_pred ----eeeeHHHHHHHHHh
Confidence 33345666666653
No 298
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=46.18 E-value=23 Score=38.38 Aligned_cols=29 Identities=14% Similarity=0.047 Sum_probs=22.4
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAKAGANAALILC 548 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmViP 548 (786)
++||++ |+ . +.+.|+.|+++|||+|.+..
T Consensus 229 ~~PvivK~v--~----~~e~a~~a~~~Gad~I~vs~ 258 (368)
T 2nli_A 229 GLPVFVKGI--Q----HPEDADMAIKRGASGIWVSN 258 (368)
T ss_dssp SSCEEEEEE--C----SHHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEcC--C----CHHHHHHHHHcCCCEEEEcC
Confidence 468887 55 2 35668899999999999965
No 299
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=46.10 E-value=34 Score=36.47 Aligned_cols=104 Identities=8% Similarity=-0.080 Sum_probs=69.2
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.+++.+=+ ++.+.++++++++..++.|++.+ --|+ .+. -++.+++|.+++++||+.=. ...+++
T Consensus 191 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~iPI~~dE------~~~~~~ 255 (371)
T 2ovl_A 191 SFPLMVDANMKWTVDGAIRAARALAPFDLHWI--EEPT--IPD-----DLVGNARIVRESGHTIAGGE------NLHTLY 255 (371)
T ss_dssp TSCEEEECTTCSCHHHHHHHHHHHGGGCCSEE--ECCS--CTT-----CHHHHHHHHHHHCSCEEECT------TCCSHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Ccc-----cHHHHHHHHhhCCCCEEeCC------CCCCHH
Confidence 45555532 45689999999999999999864 4453 221 15667788888889988644 245688
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-+++-+|-. .+....++.+....-++.+..|.
T Consensus 256 ~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~gi~~~~h~ 300 (371)
T 2ovl_A 256 DFHNAVRAGSLTLPEPDVSNIGGYTTFRKVAALAEANNMLLTSHG 300 (371)
T ss_dssp HHHHHHHHTCCSEECCCTTTTTSHHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHcCCCCEEeeCccccCCHHHHHHHHHHHHHcCCeEcccc
Confidence 8888863 5689999998 56555544332222356666654
No 300
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=45.77 E-value=44 Score=33.45 Aligned_cols=32 Identities=9% Similarity=0.017 Sum_probs=24.5
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILC 548 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViP 548 (786)
+|.-.+..+.++.++.++.++++|||+|..-.
T Consensus 122 vi~e~~~l~~~~~~~~a~~a~eaGad~I~tst 153 (225)
T 1mzh_A 122 VIVETPYLNEEEIKKAVEICIEAGADFIKTST 153 (225)
T ss_dssp EECCGGGCCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCCEEEECC
Confidence 34444566778899999999999999994443
No 301
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=45.59 E-value=41 Score=33.39 Aligned_cols=65 Identities=11% Similarity=0.081 Sum_probs=46.2
Q ss_pred CCCeEEEeCCCCC--HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCC-----------------CHHHHHHHHHHHHhcCC
Q psy11975 513 WQADLLKPQKHTT--TRATIDLTQKAAKAGANAALILCPYYFQKKM-----------------TEDLIYEHFISVADNSP 573 (786)
Q Consensus 513 GRVPVIaGVGa~S--T~EAIELAr~Ae~aGADAVmViPPyY~kps~-----------------S~eeLv~YFraIAeAtd 573 (786)
+|..+++.+.+.. .+++++.++.+++. ||.+-+..||.- |.+ +.+...+..++|.+.++
T Consensus 3 ~~~~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sd-p~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~ 80 (248)
T 1geq_A 3 KDGSLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSD-PIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSS 80 (248)
T ss_dssp CTTEEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSC-CTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCC
T ss_pred CCccEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCC
Confidence 4556776655444 47999999999999 999999988642 322 22344677788888788
Q ss_pred CCEEEE
Q psy11975 574 IPVIIY 579 (786)
Q Consensus 574 LPIiLY 579 (786)
+||.+-
T Consensus 81 ~pv~~~ 86 (248)
T 1geq_A 81 TPIVLM 86 (248)
T ss_dssp CCEEEE
T ss_pred CCEEEE
Confidence 887654
No 302
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=45.57 E-value=65 Score=32.88 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=56.5
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCc--c
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNID--I 589 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~--L 589 (786)
+|+--++|+--...+++++..+.+.+.|+.||-+.+-++. ...++++.+...|+. |+..++||+++--.. .|.. +
T Consensus 91 ~r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~~~~~~~~~~~~~d~~~~~~~~~-a~e~glpv~iH~~~~-~~~~~~~ 168 (291)
T 3irs_A 91 DKFHPVGSIEAATRKEAMAQMQEILDLGIRIVNLEPGVWATPMHVDDRRLYPLYAF-CEDNGIPVIMMTGGN-AGPDITY 168 (291)
T ss_dssp TTEEEEEECCCSSHHHHHHHHHHHHHTTCCCEEECGGGSSSCCCTTCGGGHHHHHH-HHHTTCCEEEECSSS-CSSSGGG
T ss_pred CcEEEEEecCccCHHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCHHHHHHHHH-HHHcCCeEEEeCCCC-CCCCCcc
Confidence 4555567776555677777666688999999998843321 111235566666665 456799999986432 1211 1
Q ss_pred -CHHHHHHHH-hCCCEEEE
Q psy11975 590 -SVDTLVKLA-HHENIRGV 606 (786)
Q Consensus 590 -SpelL~rLA-eiPNVVGI 606 (786)
.+..+.+++ ++|++..|
T Consensus 169 ~~p~~~~~v~~~~P~l~iv 187 (291)
T 3irs_A 169 TNPEHIDRVLGDFPDLTVV 187 (291)
T ss_dssp GCHHHHHHHHHHCTTCCEE
T ss_pred CCHHHHHHHHHHCCCCEEE
Confidence 245566666 57776544
No 303
>1k8w_A TRNA pseudouridine synthase B; protein-RNA complex, T stem-loop, lyase/RNA complex; HET: FHU; 1.85A {Escherichia coli} SCOP: b.122.1.1 d.265.1.2 PDB: 1zl3_A* 1r3f_A
Probab=45.50 E-value=4.4 Score=43.75 Aligned_cols=13 Identities=31% Similarity=0.417 Sum_probs=7.8
Q ss_pred HHHHHcCCCEEEE
Q psy11975 534 QKAAKAGANAALI 546 (786)
Q Consensus 534 r~Ae~aGADAVmV 546 (786)
.-++.+|+-|.|.
T Consensus 199 DiG~~Lg~~a~~~ 211 (327)
T 1k8w_A 199 DLGEKLGCGAHVI 211 (327)
T ss_dssp HHHHHHTSCEEEE
T ss_pred HHHHHhCCCeEEE
Confidence 3445667777664
No 304
>2yru_A Steroid receptor RNA activator 1; SRAP, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=45.27 E-value=31 Score=31.97 Aligned_cols=46 Identities=15% Similarity=0.176 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhhhHHHHHhhhhccccCHHHHHHHHHH
Q psy11975 657 GPICELYDLAKAGKWEEAMKLQHRLVKPDVTVRNVLLMKEMGVPGVRAAMEL 708 (786)
Q Consensus 657 el~vaL~eA~~aGD~eeAreLQ~rL~pLi~~l~~~~~~~~~~ia~lKaaL~l 708 (786)
+.+.+|.+|+.++|+++|.+++..|..-. + .....++.++|.++..
T Consensus 63 ~~L~~l~~al~~~dy~~A~~ih~~l~t~~--~----~E~~~Wm~GlKrLI~~ 108 (118)
T 2yru_A 63 KRMALLVQELLHHQWDAADDIHRSLMVDH--V----TEVSQWMVGVKRLIAE 108 (118)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHST--H----HHHTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHCc--H----HHHHhHHHHHHHHHHH
Confidence 56778999999999999999997766411 1 1245678999988764
No 305
>4b1m_A Levanase; hydrolase, CBM66; HET: FRU; 1.10A {Bacillus subtilis} PDB: 4b1l_A* 4azz_A
Probab=44.94 E-value=4.5 Score=39.38 Aligned_cols=8 Identities=13% Similarity=-0.196 Sum_probs=5.4
Q ss_pred cccccccc
Q psy11975 247 SRTLSIQD 254 (786)
Q Consensus 247 ~~~~~~~~ 254 (786)
...|++++
T Consensus 37 ~g~W~v~~ 44 (185)
T 4b1m_A 37 NGTWADTI 44 (185)
T ss_dssp SSEEEEET
T ss_pred CCeEEEeC
Confidence 46787774
No 306
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.79 E-value=18 Score=31.92 Aligned_cols=56 Identities=11% Similarity=-0.059 Sum_probs=43.7
Q ss_pred cCCCCCCCceEEEec----ccCCCCCccccCCCCC--CCcEEEEEeCCCCCccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSV----KGYPSWPGKLISPAPT--QGRVWVKWFGMSNEPLSEVEPATLK 408 (786)
Q Consensus 353 ~~~~f~vGDLVWaKv----kG~PwWPg~V~~~~~~--~g~~~V~fFG~~~~a~s~V~~k~Lk 408 (786)
....|.+|+.|++.. ++--|-+|+|++.... ...|.|.|-|-+.+--.||..++|.
T Consensus 6 ~~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 67 (87)
T 2eko_A 6 SGGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLD 67 (87)
T ss_dssp SSCSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBC
T ss_pred ccccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHcc
Confidence 345799999999998 4667899999985543 3479999999997555668877774
No 307
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=44.34 E-value=1.1e+02 Score=30.68 Aligned_cols=128 Identities=13% Similarity=0.108 Sum_probs=69.3
Q ss_pred CeEEEeCCCCCHHHH-HHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEE---EeCCCCcCCccC
Q psy11975 515 ADLLKPQKHTTTRAT-IDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVII---YNNTFVTNIDIS 590 (786)
Q Consensus 515 VPVIaGVGa~ST~EA-IELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiL---YNiP~~TGv~LS 590 (786)
.+|++=+=-.+..++ ...++.+.++|||.+-+.+ | .+ .+.+....+.+. ..+.-|++ -..|+.. ..+.
T Consensus 65 ~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~--~--~G--~~~l~~~~~~~~-~~g~~v~vLt~~s~~~~~-~~~~ 136 (228)
T 3m47_A 65 CRIIADFKVADIPETNEKICRATFKAGADAIIVHG--F--PG--ADSVRACLNVAE-EMGREVFLLTEMSHPGAE-MFIQ 136 (228)
T ss_dssp CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEES--T--TC--HHHHHHHHHHHH-HHTCEEEEECCCCSGGGG-TTHH
T ss_pred CeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEec--c--CC--HHHHHHHHHHHH-hcCCCeEEEEeCCCccHH-HHHH
Confidence 456653322344443 4466777889999988874 2 22 455555555443 33333443 1222210 0111
Q ss_pred --HHHHHHHHhCCCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeCC---c-chhhhhhccCCcccccccc
Q psy11975 591 --VDTLVKLAHHENIRGVKDT--DNIKLANMANQTKDLNFSVFAGS---A-GYLLSGLLVGCAGGINALS 652 (786)
Q Consensus 591 --pelL~rLAeiPNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G~---D-elLL~aL~~GAdG~Isg~a 652 (786)
.+.+++++....+.|+.-+ ....+.++.+ ..+.+|.++++. . ... .++.+|++..+.|-+
T Consensus 137 ~~~~~~a~~a~~~G~~GvV~~at~~~e~~~ir~-~~~~~~~iv~PGI~~~g~~p-~~~~aGad~iVvGr~ 204 (228)
T 3m47_A 137 GAADEIARMGVDLGVKNYVGPSTRPERLSRLRE-IIGQDSFLISPGVGAQGGDP-GETLRFADAIIVGRS 204 (228)
T ss_dssp HHHHHHHHHHHHTTCCEEECCSSCHHHHHHHHH-HHCSSSEEEECC----------CGGGTCSEEEECHH
T ss_pred HHHHHHHHHHHHhCCcEEEECCCChHHHHHHHH-hcCCCCEEEecCcCcCCCCH-hHHHcCCCEEEECHH
Confidence 1344555555778899988 4666766655 345557766632 1 124 778899998777743
No 308
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=44.31 E-value=9 Score=38.43 Aligned_cols=35 Identities=11% Similarity=-0.035 Sum_probs=24.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYF 552 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~ 552 (786)
++|||++=+-.+.++ ++.+.+.|||+|++....+.
T Consensus 79 ~ipvi~~Ggi~~~~~----~~~~l~~Gad~V~ig~~~l~ 113 (247)
T 3tdn_A 79 TLPIIASGGAGKMEH----FLEAFLRGADKVSINTAAVE 113 (247)
T ss_dssp CSCEEEESCCCSHHH----HHHHHHTTCSEECCSHHHHH
T ss_pred CCCEEEeCCCCCHHH----HHHHHHcCCCeeehhhHHhh
Confidence 579999766666655 34445689999998876543
No 309
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=44.23 E-value=8.5 Score=33.08 Aligned_cols=58 Identities=12% Similarity=0.001 Sum_probs=43.9
Q ss_pred CCCCCCceEEEeccc---CCCCCccccCCCCCCC--cEEEEEeCCCCCccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKG---YPSWPGKLISPAPTQG--RVWVKWFGMSNEPLSEVEPATLKSLSQ 412 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG---~PwWPg~V~~~~~~~g--~~~V~fFG~~~~a~s~V~~k~LkpFsE 412 (786)
..|.+|+.|+.+... --|.+|+|++.....+ .|.|.|-|-+.+---||..++|..+.+
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri~~~~~ 66 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRIIWPLD 66 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGEECSSC
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhcccccc
Confidence 469999999998752 2578999998654333 689999999865445688888877665
No 310
>2yjp_A Putative ABC transporter, periplasmic binding Pro amino acid; transport protein, solute-binding protein; 2.26A {Neisseria gonorrhoeae}
Probab=44.20 E-value=4.7 Score=40.35 Aligned_cols=7 Identities=14% Similarity=0.145 Sum_probs=0.0
Q ss_pred CCCcccc
Q psy11975 228 KPLSRTM 234 (786)
Q Consensus 228 ~~~~~~~ 234 (786)
+.+.|.+
T Consensus 18 ~~~~~~l 24 (291)
T 2yjp_A 18 DDDDKHM 24 (291)
T ss_dssp -------
T ss_pred ccchhHH
Confidence 3444433
No 311
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=43.91 E-value=47 Score=35.66 Aligned_cols=106 Identities=12% Similarity=0.061 Sum_probs=70.3
Q ss_pred CCCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
+..+++++-+ ++.+.++++++++..++.|++. +--|. .+. -++.+++|.+++++||+.=. ...+
T Consensus 197 G~d~~l~vD~n~~~~~~~a~~~~~~l~~~~i~~--iE~P~--~~~-----~~~~~~~l~~~~~ipIa~dE------~~~~ 261 (392)
T 2poz_A 197 GPEIELMVDLSGGLTTDETIRFCRKIGELDICF--VEEPC--DPF-----DNGALKVISEQIPLPIAVGE------RVYT 261 (392)
T ss_dssp CTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEE--EECCS--CTT-----CHHHHHHHHHHCSSCEEECT------TCCH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCE--EECCC--Ccc-----cHHHHHHHHhhCCCCEEecC------CcCC
Confidence 3356666633 4568999999999999988764 44453 221 25677888888899988643 2345
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
++.+.++.+ .-+++-+|-. .+....++.+....-++.++.+.
T Consensus 262 ~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h~ 308 (392)
T 2poz_A 262 RFGFRKIFELQACGIIQPDIGTAGGLMETKKICAMAEAYNMRVAPHV 308 (392)
T ss_dssp HHHHHHHHTTTCCSEECCCTTTSSCHHHHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEecCC
Confidence 788888884 4689999988 66655555442223456655543
No 312
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=43.89 E-value=7.9 Score=42.08 Aligned_cols=88 Identities=6% Similarity=-0.054 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC--
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE-- 601 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP-- 601 (786)
.+.++++++++.++++|+|++-+..+.+.... ......++.+.|.+++++||+.= .| ++++...++.+..
T Consensus 253 ~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~-~~~~~~~~~~~vr~~~~iPvi~~-----G~--i~~~~a~~~l~~g~a 324 (376)
T 1icp_A 253 NPTALGLYMVESLNKYDLAYCHVVEPRMKTAW-EKIECTESLVPMRKAYKGTFIVA-----GG--YDREDGNRALIEDRA 324 (376)
T ss_dssp CHHHHHHHHHHHHGGGCCSEEEEECCSCCC-------CCCCSHHHHHHCCSCEEEE-----SS--CCHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCcccCCC-CccccHHHHHHHHHHcCCCEEEe-----CC--CCHHHHHHHHHCCCC
Confidence 35678999999999999999999876543211 00012345677778888998752 23 3788888887544
Q ss_pred CEEEEEeC---CHHHHHHHHh
Q psy11975 602 NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 602 NVVGIKDS---Dl~ri~~ll~ 619 (786)
.+|++=-. |+.-+.++.+
T Consensus 325 D~V~~gR~~l~~P~l~~k~~~ 345 (376)
T 1icp_A 325 DLVAYGRLFISNPDLPKRFEL 345 (376)
T ss_dssp SEEEESHHHHHCTTHHHHHHH
T ss_pred cEEeecHHHHhCccHHHHHHc
Confidence 34444333 6665666654
No 313
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=43.78 E-value=4.9 Score=40.75 Aligned_cols=14 Identities=21% Similarity=0.292 Sum_probs=8.8
Q ss_pred CCCCHHHHHHHHHh
Q psy11975 465 TSMPIQKRKSLLRK 478 (786)
Q Consensus 465 ~sLT~dER~~Lle~ 478 (786)
..++.++..++++.
T Consensus 138 ~~~~~~~~~~~~~~ 151 (285)
T 2c07_A 138 LRMKNDEWEDVLRT 151 (285)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHH
Confidence 45666776666665
No 314
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=43.78 E-value=20 Score=37.89 Aligned_cols=73 Identities=16% Similarity=0.071 Sum_probs=46.0
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDT 593 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpel 593 (786)
.++|++.+.. .+.++.++++|+|+|++..+-+.... .+..-.+.+.+|.++.++||++= .|+ -+.+.
T Consensus 124 g~~v~~~v~s------~~~a~~a~~~GaD~i~v~g~~~GG~~-G~~~~~~ll~~i~~~~~iPviaa-----GGI-~~~~d 190 (326)
T 3bo9_A 124 GTKVIPVVAS------DSLARMVERAGADAVIAEGMESGGHI-GEVTTFVLVNKVSRSVNIPVIAA-----GGI-ADGRG 190 (326)
T ss_dssp TCEEEEEESS------HHHHHHHHHTTCSCEEEECTTSSEEC-CSSCHHHHHHHHHHHCSSCEEEE-----SSC-CSHHH
T ss_pred CCcEEEEcCC------HHHHHHHHHcCCCEEEEECCCCCccC-CCccHHHHHHHHHHHcCCCEEEE-----CCC-CCHHH
Confidence 3678887743 45677788999999999875432210 01113567778888888998752 232 24666
Q ss_pred HHHHHh
Q psy11975 594 LVKLAH 599 (786)
Q Consensus 594 L~rLAe 599 (786)
+.++.+
T Consensus 191 v~~al~ 196 (326)
T 3bo9_A 191 MAAAFA 196 (326)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 666654
No 315
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=43.71 E-value=73 Score=31.18 Aligned_cols=61 Identities=8% Similarity=0.121 Sum_probs=43.6
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..+++.....+.....+..+.+.+.++|++++.+.. .+.....++.+. ..++|++++|.+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~-------~~~~~~~~~~~~-~~~iPvV~~~~~~ 96 (291)
T 3l49_A 36 GTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGN-------LDVLNPWLQKIN-DAGIPLFTVDTAT 96 (291)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSC-------HHHHHHHHHHHH-HTTCCEEEESCCC
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-------hhhhHHHHHHHH-HCCCcEEEecCCC
Confidence 445555556677888888999999999999988532 334445555544 4589999999753
No 316
>1eyb_A Homogentisate 1,2-dioxygenase; jelly roll, beta sandwich, oxidoreductase; 1.90A {Homo sapiens} SCOP: b.82.1.4 PDB: 1ey2_A
Probab=43.69 E-value=5.5 Score=44.90 Aligned_cols=47 Identities=30% Similarity=0.411 Sum_probs=11.5
Q ss_pred CCCCCCCCCCCCCcccccccccCCCCCcccccccccccccccccccccccc
Q psy11975 204 HHHSHHHRSHSHHHHQSQSKHHHSKPLSRTMFGPVSRLCLKVTSRTLSIQD 254 (786)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (786)
|||.|||+.||..|-....||-.+..--+-|-| +--...+|+.++.|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G----fgn~~~sEavr~pg 49 (471)
T 1eyb_A 3 HHHHHHHHHHSSGHIDDDDKHMGSMAELKYISG----FGNECSSEDPRCPG 49 (471)
T ss_dssp -------------------------CCCCEEEC----TTCCEEEECTTSTT
T ss_pred ccccccccccccCCcCccccccCCCcchhhhhh----hcccChhhHhhCCC
Confidence 566666666677777777888766443344433 22345678877766
No 317
>4f0h_A Ribulose bisphosphate carboxylase large chain; alpha beta domain, catalytic domain TIM barrel, carboxylase/oxygenase, nitrosylation; 1.96A {Galdieria sulphuraria} PDB: 4f0k_A 4f0m_A 1bwv_A* 1iwa_A 1bxn_A
Probab=43.59 E-value=52 Score=37.41 Aligned_cols=94 Identities=13% Similarity=0.024 Sum_probs=56.1
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC----
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN---- 586 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG---- 586 (786)
++.+.-..++|++.+.+|.++.|+.|.++|+.++|+-. . ...+ .....+..|+..++||.++ |...|
T Consensus 241 TGe~K~~~~NiTa~~~~eM~~Ra~~a~e~G~~~vmvd~-~-~G~~-----a~~~La~~~r~~~l~LH~H--RAghga~sr 311 (493)
T 4f0h_A 241 TGEVKGHYLNVTAATMEEMYARAQLAKELGSVIIMIDL-V-IGYT-----AIQTMAKWARDNDMILHLH--RAGNSTYSR 311 (493)
T ss_dssp HSSCCEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEG-G-GCHH-----HHHHHHHHHHHHTCEEEEE--CTTTHHHHS
T ss_pred HCCcceEEeecCCCCHHHHHHHHHHHHhcCCCeEEEec-c-cccc-----hhHHHHHHHHHcCceEEec--cCccccccC
Confidence 34344456799998999999999999999999999852 1 1211 1233333333447877544 22222
Q ss_pred ---CccCHHHHHHH---Hh-----CCCEEEEEeC-CHHHH
Q psy11975 587 ---IDISVDTLVKL---AH-----HENIRGVKDT-DNIKL 614 (786)
Q Consensus 587 ---v~LSpelL~rL---Ae-----iPNVVGIKDS-Dl~ri 614 (786)
..++..++.+| +. .++++| |.+ |...+
T Consensus 312 ~~~hGis~~Vl~Kl~RLaGaD~iH~gT~~G-Klegd~~~~ 350 (493)
T 4f0h_A 312 QKNHGMNFRVICKWMRMAGVDHIHAGTVVG-KLEGDPIIT 350 (493)
T ss_dssp SSSSEECHHHHHHHHHHHTCSEEECCCSSS-TTCCCHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCeeeecCcCC-cccCCHHHH
Confidence 23555555554 42 256644 777 65433
No 318
>3tut_A RNA 3'-terminal phosphate cyclase; cyclase family, cyclization of RNA 3'-phosphate ENDS, transf; HET: ATP; 1.58A {Escherichia coli} PDB: 3tux_A* 3tv1_A* 3tw3_A* 3kgd_A* 1qmh_A* 1qmi_A
Probab=43.57 E-value=4.9 Score=43.88 Aligned_cols=13 Identities=15% Similarity=0.358 Sum_probs=7.0
Q ss_pred ccccccccccccC
Q psy11975 245 VTSRTLSIQDKEE 257 (786)
Q Consensus 245 ~~~~~~~~~~~~~ 257 (786)
++.+..+|..|--
T Consensus 48 Ltgkpv~I~nIR~ 60 (358)
T 3tut_A 48 ITGQPFTITSIRA 60 (358)
T ss_dssp HHCCCEEEESTTT
T ss_pred hhCCCEEEEEecC
Confidence 4455566665543
No 319
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=43.49 E-value=30 Score=37.31 Aligned_cols=104 Identities=8% Similarity=-0.058 Sum_probs=68.9
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+=+ ++.+.++++++++..++.|++.+ -.|. .+. -++.+++|.+++++||+.=. ...+++
T Consensus 207 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~~-----~~~~~~~l~~~~~iPIa~dE------~~~~~~ 271 (393)
T 2og9_A 207 AVPLMVDANQQWDRPTAQRMCRIFEPFNLVWI--EEPL--DAY-----DHEGHAALALQFDTPIATGE------MLTSAA 271 (393)
T ss_dssp TSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE--ECCS--CTT-----CHHHHHHHHHHCSSCEEECT------TCCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhhCCCEE--ECCC--Ccc-----cHHHHHHHHHhCCCCEEeCC------CcCCHH
Confidence 45555522 45689999999999999999854 3443 121 25677888888899998644 234688
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-.++.+|-. .+....++.+....-++.+..+.
T Consensus 272 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 272 EHGDLIRHRAADYLMPDAPRVGGITPFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp HHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred HHHHHHHCCCCCEEeeCccccCCHHHHHHHHHHHHHcCCEEeccC
Confidence 8888874 4689999988 56555444432222356665543
No 320
>3fdr_A Tudor and KH domain-containing protein; TDRD2, structural genomics, structural genomics consortium, SGC, alternative splicing, RNA-binding; 1.75A {Homo sapiens} SCOP: b.34.9.1
Probab=43.47 E-value=14 Score=32.09 Aligned_cols=56 Identities=13% Similarity=0.256 Sum_probs=44.2
Q ss_pred CCCCCCceEEEec-ccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSV-KGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQG 413 (786)
Q Consensus 355 ~~f~vGDLVWaKv-kG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsEg 413 (786)
....+||++=|+- .---|..|+|.+... .+.+.|.|-+.+. ...|..++|+++.+.
T Consensus 26 ~~~~~G~~c~a~~~~d~~wyRA~I~~~~~-~~~~~V~fvDyGn--~e~v~~~~lr~l~~~ 82 (94)
T 3fdr_A 26 LTVHVGDIVAAPLPTNGSWYRARVLGTLE-NGNLDLYFVDFGD--NGDCPLKDLRALRSD 82 (94)
T ss_dssp CCCCTTCEEEEEETTTTEEEEEEEEEECT-TSCEEEEETTTCC--EEEECGGGCEECCGG
T ss_pred CCCCCCCEEEEEECCCCeEEEEEEEEECC-CCeEEEEEEcCCC--eEEEEHHHhhhcCHH
Confidence 4688999999996 234699999998753 3689999988885 456888999998654
No 321
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=43.45 E-value=17 Score=31.67 Aligned_cols=55 Identities=15% Similarity=-0.034 Sum_probs=42.6
Q ss_pred ccCCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccc
Q psy11975 352 TKLLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKS 409 (786)
Q Consensus 352 ~~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~Lkp 409 (786)
....+|.+||=|.++-+-==..+|.|+.......++.|+|.... -.|+..++|++
T Consensus 22 ~p~~~f~eGeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~S---~~W~~~kdi~~ 76 (79)
T 2m0o_A 22 GPRPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDS---QFLVLWKDISP 76 (79)
T ss_dssp SCCCCCCTTCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTSC---EEEEETTTBCC
T ss_pred CCcceeccCCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCCC---eEEEEeecccc
Confidence 34468999999999988777899999977666678899976654 34466777765
No 322
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=43.44 E-value=80 Score=31.16 Aligned_cols=83 Identities=16% Similarity=0.076 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCC--CCHHHHHHHHHHHHhc-CCCCEEEEeCCCCcC-CccCHHHHHHHHh-C-
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKK--MTEDLIYEHFISVADN-SPIPVIIYNNTFVTN-IDISVDTLVKLAH-H- 600 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps--~S~eeLv~YFraIAeA-tdLPIiLYNiP~~TG-v~LSpelL~rLAe-i- 600 (786)
+...+.++.|+++|+..|.+.+....... ...+.+++.++++++. .++.|.+-|.+.... ..-+++.+.+|.+ +
T Consensus 89 ~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~~~ 168 (287)
T 2x7v_A 89 ELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIRDLVD 168 (287)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHHHhcC
Confidence 34556778889999999988665443221 0123467778888776 479899988875321 1237888888873 4
Q ss_pred --CCEEEEEeC
Q psy11975 601 --ENIRGVKDT 609 (786)
Q Consensus 601 --PNVVGIKDS 609 (786)
|+|--.=|+
T Consensus 169 ~~~~vg~~~D~ 179 (287)
T 2x7v_A 169 QRDRVAITYDT 179 (287)
T ss_dssp CGGGEEEEEEH
T ss_pred CCCCeEEEEEh
Confidence 666555555
No 323
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=43.38 E-value=1e+02 Score=33.02 Aligned_cols=104 Identities=11% Similarity=0.111 Sum_probs=69.9
Q ss_pred CCeEEEe-CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKP-QKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaG-VGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++++= =++-+.++++++++..++.|++.+ --|. .+. -++.+++|.+++++||+.=. ...+.+
T Consensus 194 ~~~l~vDan~~~~~~~A~~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~iPIa~dE------~~~~~~ 258 (383)
T 3i4k_A 194 RVSLRIDINARWDRRTALHYLPILAEAGVELF--EQPT--PAD-----DLETLREITRRTNVSVMADE------SVWTPA 258 (383)
T ss_dssp TSEEEEECTTCSCHHHHHHHHHHHHHTTCCEE--ESCS--CTT-----CHHHHHHHHHHHCCEEEEST------TCSSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Chh-----hHHHHHHHHhhCCCCEEecC------ccCCHH
Confidence 4556652 245679999999999999998755 3453 222 14567778888899998643 345688
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-.++-+|-+ .+....++......-++.+..|.
T Consensus 259 ~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 303 (383)
T 3i4k_A 259 EALAVVKAQAADVIALKTTKHGGLLESKKIAAIAEAGGLACHGAT 303 (383)
T ss_dssp HHHHHHHHTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHcCCCCEEEEcccccCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 8888873 5689999988 56665555432223457776654
No 324
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=43.37 E-value=38 Score=36.52 Aligned_cols=103 Identities=12% Similarity=0.088 Sum_probs=68.1
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+-+ ++.+.++++++++..++.|++.+ --|. .+. -++.+++|.+++++||+.=. ...+++
T Consensus 189 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----~~~~~~~l~~~~~iPIa~dE------~~~~~~ 253 (397)
T 2qde_A 189 DVDLFIDINGAWTYDQALTTIRALEKYNLSKI--EQPL--PAW-----DLDGMARLRGKVATPIYADE------SAQELH 253 (397)
T ss_dssp TSCEEEECTTCCCHHHHHHHHHHHGGGCCSCE--ECCS--CTT-----CHHHHHHHHTTCSSCEEEST------TCCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhCCCCEE--ECCC--Chh-----hHHHHHHHHhhCCCCEEEeC------CcCCHH
Confidence 45555532 45689999999999999999853 3443 221 25778888888899988643 335678
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+.++.+ .-+++-+|-. .+....++.+....-++.++.|
T Consensus 254 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 297 (397)
T 2qde_A 254 DLLAIINKGAADGLMIKTQKAGGLLKAQRWLTLARLANLPVICG 297 (397)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEe
Confidence 8888873 5789999998 5655544433211224555555
No 325
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=43.27 E-value=1.9e+02 Score=28.31 Aligned_cols=109 Identities=12% Similarity=-0.029 Sum_probs=57.8
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC-CEEEEEeC-
Q psy11975 532 LTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE-NIRGVKDT- 609 (786)
Q Consensus 532 LAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP-NVVGIKDS- 609 (786)
.++.+.++|||.+.+..= +. .+.+.+..+.+ +..++..++ +++.. .+++.+.++.+.. ..+++.-+
T Consensus 75 ~~~~~~~aGad~i~vh~~----~~--~~~~~~~~~~~-~~~g~~~~~-d~l~~----~T~~~~~~~~~~g~d~v~~~~~~ 142 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAA----AH--IATIAACKKVA-DELNGEIQI-EIYGN----WTMQDAKAWVDLGITQAIYHRSR 142 (218)
T ss_dssp HHHHHHHHTCSEEEEETT----SC--HHHHHHHHHHH-HHHTCEEEE-ECCSS----CCHHHHHHHHHTTCCEEEEECCH
T ss_pred HHHHHHhcCCCEEEEecC----CC--HHHHHHHHHHH-HHhCCccce-eeeec----CCHHHHHHHHHcCccceeeeecc
Confidence 568889999999888631 12 34445555444 344666654 22221 2456666665431 12222222
Q ss_pred ------------CHHHHHHHHhhcCCCCEEEEeCCc-chhhhhhccCCcccccccccc
Q psy11975 610 ------------DNIKLANMANQTKDLNFSVFAGSA-GYLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 610 ------------Dl~ri~~ll~~~~~~df~Vf~G~D-elLL~aL~~GAdG~Isg~aN~ 654 (786)
.+.+++++.. ..-.+.+-.|-. +.....+.+|+++++.|.+-+
T Consensus 143 ~~~~~g~~~~~~~l~~i~~~~~--~~~pi~v~GGI~~~~~~~~~~aGAd~vvvGsaI~ 198 (218)
T 3jr2_A 143 DAELAGIGWTTDDLDKMRQLSA--LGIELSITGGIVPEDIYLFEGIKTKTFIAGRALA 198 (218)
T ss_dssp HHHHHTCCSCHHHHHHHHHHHH--TTCEEEEESSCCGGGGGGGTTSCEEEEEESGGGS
T ss_pred ccccCCCcCCHHHHHHHHHHhC--CCCCEEEECCCCHHHHHHHHHcCCCEEEEchhhc
Confidence 1233333321 112244445544 346678889999999997644
No 326
>2apo_A Probable tRNA pseudouridine synthase B; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: b.122.1.1 d.265.1.2
Probab=43.16 E-value=5 Score=43.75 Aligned_cols=47 Identities=6% Similarity=-0.099 Sum_probs=24.1
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc------CCCCCCCCCCHHHHHH
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALIL------CPYYFQKKMTEDLIYE 563 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmVi------PPyY~kps~S~eeLv~ 563 (786)
-+-+.++.-+.-.++.. .-++.+|+.|.|.. -||-..-..+-+++.+
T Consensus 189 ~~~v~cs~GTYIRsL~~-DiG~~LG~~a~~~~LrRt~~G~f~~~~a~tl~~l~~ 241 (357)
T 2apo_A 189 LFRVKCQSGTYIRKLCE-DIGEALGTSAHMQELRRTKSGCFEEKDAVYLQDLLD 241 (357)
T ss_dssp EEEEEECTTCCHHHHHH-HHHHHTTSCEEEEEEEEEEETTEEGGGCBCHHHHHH
T ss_pred EEEEEECCCchHHHHHH-HHHHhhCCCEEEEEEEEEEEccCcHHHccCHHHHHh
Confidence 34344444343333333 45677888888763 3443332235666654
No 327
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=43.00 E-value=99 Score=32.75 Aligned_cols=104 Identities=11% Similarity=0.115 Sum_probs=69.4
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+-+ ++.+.++++++++..++.|++.+ --|. .+. -++.+++|.+++++||+.=. ...+++
T Consensus 188 ~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----~~~~~~~l~~~~~ipIa~dE------~~~~~~ 252 (370)
T 1nu5_A 188 RASVRVDVNQGWDEQTASIWIPRLEEAGVELV--EQPV--PRA-----NFGALRRLTEQNGVAILADE------SLSSLS 252 (370)
T ss_dssp GCEEEEECTTCCCHHHHHHHHHHHHHHTCCEE--ECCS--CTT-----CHHHHHHHHHHCSSEEEEST------TCCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCcceE--eCCC--Ccc-----cHHHHHHHHHhCCCCEEeCC------CCCCHH
Confidence 34555522 45689999999999999999853 4553 221 15667888888899988643 235688
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-+++-+|-. .+....++.+....-++.++.|.
T Consensus 253 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 297 (370)
T 1nu5_A 253 SAFELARDHAVDAFSLKLCNMGGIANTLKVAAVAEAAGISSYGGT 297 (370)
T ss_dssp HHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEECC
T ss_pred HHHHHHHhCCCCEEEEchhhcCCHHHHHHHHHHHHHcCCcEEecC
Confidence 8888875 3689999988 66555554432222356666664
No 328
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=42.83 E-value=25 Score=38.17 Aligned_cols=30 Identities=10% Similarity=0.030 Sum_probs=22.7
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcCC
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAKAGANAALILCP 549 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmViPP 549 (786)
++||++ ++ .+ .+.|+.|+++|||+|.+...
T Consensus 217 ~~PvivK~v--~~----~e~A~~a~~~GaD~I~vsn~ 247 (352)
T 3sgz_A 217 RLPIILKGI--LT----KEDAELAMKHNVQGIVVSNH 247 (352)
T ss_dssp CSCEEEEEE--CS----HHHHHHHHHTTCSEEEECCG
T ss_pred CCCEEEEec--Cc----HHHHHHHHHcCCCEEEEeCC
Confidence 467877 55 22 46688999999999999863
No 329
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=42.80 E-value=59 Score=32.97 Aligned_cols=66 Identities=5% Similarity=0.003 Sum_probs=44.5
Q ss_pred CCCCeEEEeC----CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHh---cCCCCEEEEeCC
Q psy11975 512 EWQADLLKPQ----KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVAD---NSPIPVIIYNNT 582 (786)
Q Consensus 512 aGRVPVIaGV----Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAe---AtdLPIiLYNiP 582 (786)
.+++.||+.- +..+.++.+++.+.+++.|||-+=+....- +.+++.+.++...+ ..+.|++.|++-
T Consensus 123 ~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~gaDivKia~~a~-----~~~D~l~ll~~~~~~~~~~~~P~I~~~MG 195 (238)
T 1sfl_A 123 QYNKEVIISHHNFESTPPLDELQFIFFKMQKFNPEYVKLAVMPH-----NKNDVLNLLQAMSTFSDTMDCKVVGISMS 195 (238)
T ss_dssp HTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTCCSEEEEEECCS-----SHHHHHHHHHHHHHHHHHCSSEEEEEECT
T ss_pred hcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcCCCEEEEEecCC-----CHHHHHHHHHHHHHHhhcCCCCEEEEECC
Confidence 4678888843 345678899999999999999775543221 35555555544332 357899999974
No 330
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=42.50 E-value=33 Score=37.13 Aligned_cols=78 Identities=4% Similarity=-0.087 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC--CE
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE--NI 603 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP--NV 603 (786)
.++++++++.++++|+|.+-+..+.+ . . .+.+.|.+++++||+.= |. ++++...++.+.. .+
T Consensus 249 ~~~~~~la~~l~~~Gvd~i~v~~~~~-~----~----~~~~~ik~~~~iPvi~~------Gg-it~e~a~~~l~~G~aD~ 312 (361)
T 3gka_A 249 AATFGHVARELGRRRIAFLFARESFG-G----D----AIGQQLKAAFGGPFIVN------EN-FTLDSAQAALDAGQADA 312 (361)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCS-T----T----CCHHHHHHHHCSCEEEE------SS-CCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCC-C----H----HHHHHHHHHcCCCEEEe------CC-CCHHHHHHHHHcCCccE
Confidence 67899999999999999999987652 1 1 34566666678898753 22 4899998888644 34
Q ss_pred EEEEeC---CHHHHHHHHh
Q psy11975 604 RGVKDT---DNIKLANMAN 619 (786)
Q Consensus 604 VGIKDS---Dl~ri~~ll~ 619 (786)
|++=-. |++-..++.+
T Consensus 313 V~iGR~~ladPdl~~k~~~ 331 (361)
T 3gka_A 313 VAWGKLFIANPDLPRRFKL 331 (361)
T ss_dssp EEESHHHHHCTTHHHHHHH
T ss_pred EEECHHhHhCcHHHHHHHh
Confidence 444333 6665666654
No 331
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=42.47 E-value=1.7e+02 Score=29.82 Aligned_cols=88 Identities=14% Similarity=0.093 Sum_probs=57.2
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEe-CCCCcCCccCHHHH
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYN-NTFVTNIDISVDTL 594 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYN-iP~~TGv~LSpelL 594 (786)
|-+..+.......+..+++++.+.|..-|.++.+-+. .-.+..+.|++.+++.++.|+... +| ....+++ ..+
T Consensus 115 ~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~~~~~----~g~~~~~~~~~~~~~~G~~v~~~~~~~-~~~~d~~-~~l 188 (375)
T 3i09_A 115 PYTVHYAYDTMALAKGTGSAVVKQGGKTWFFLTADYA----FGKALEKNTADVVKANGGKVLGEVRHP-LSASDFS-SFL 188 (375)
T ss_dssp TTEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSH----HHHHHHHHHHHHHHHTTCEEEEEEEEC-TTCSCCH-HHH
T ss_pred CcEEEeeCChHHHHHHHHHHHHHcCCceEEEEecccH----HHHHHHHHHHHHHHHcCCEEeeeeeCC-CCCccHH-HHH
Confidence 4455565656667788899999999999998844321 135578888888888888876432 22 2234554 456
Q ss_pred HHHH-hCCCEEEEEeC
Q psy11975 595 VKLA-HHENIRGVKDT 609 (786)
Q Consensus 595 ~rLA-eiPNVVGIKDS 609 (786)
.+|. .-|.++.+=..
T Consensus 189 ~~i~~~~~d~v~~~~~ 204 (375)
T 3i09_A 189 LQAQSSKAQILGLANA 204 (375)
T ss_dssp HHHHHTCCSEEEEECC
T ss_pred HHHHhCCCCEEEEecC
Confidence 6665 45777765333
No 332
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=42.43 E-value=2.2e+02 Score=29.77 Aligned_cols=106 Identities=13% Similarity=0.165 Sum_probs=68.9
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+-+ ++.+.++++++++..++.|++...+--|. .+. -++.+++|.+++++||+.=.. ..+++
T Consensus 182 ~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~~~iE~P~--~~~-----~~~~~~~l~~~~~ipia~dE~------~~~~~ 248 (345)
T 2zad_A 182 GAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPV--RRE-----DIEGLKFVRFHSPFPVAADES------ARTKF 248 (345)
T ss_dssp TCEEEEECTTCSCHHHHHHHHHHHHHTTCCCSEEECCS--CTT-----CHHHHHHHHHHSSSCEEESTT------CCSHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhcCCCeeeeeCCC--Ccc-----cHHHHHHHHHhCCCCEEEeCC------cCCHH
Confidence 45665533 45689999999999999998832344554 122 156677888888999887442 34688
Q ss_pred HHHHHHh--CCCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT--DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-+++-+|-. -+....++.+....-++.++.|.
T Consensus 249 ~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~~~g~~~~~~~ 292 (345)
T 2zad_A 249 DVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIGC 292 (345)
T ss_dssp HHHHHHHHTCCSEEEECHHHHHHHHHHHHHHHHHTTTCEEEECC
T ss_pred HHHHHHHhCCCCEEEEecccccHHHHHHHHHHHHHcCCeEEEec
Confidence 8888873 5689999877 44433333332223456766664
No 333
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=42.41 E-value=28 Score=29.14 Aligned_cols=54 Identities=19% Similarity=0.089 Sum_probs=41.7
Q ss_pred CCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccc
Q psy11975 354 LLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSL 410 (786)
Q Consensus 354 ~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpF 410 (786)
..+|.+||=|.+.=+-==..||.|........++.|+|+.+. -.|+..++|++.
T Consensus 5 ~~~f~eGqdVLarWsDGlfYlgtV~kV~~~~~~ClV~FeD~s---~~wv~~kdi~~~ 58 (63)
T 2e5q_A 5 SSGLTEGQYVLCRWTDGLYYLGKIKRVSSSKQSCLVTFEDNS---KYWVLWKDIQHA 58 (63)
T ss_dssp CCCCCTTCEEEEECTTSCEEEEEECCCCSTTSEEEEEETTSC---EEEEEGGGEECC
T ss_pred ccceecCCEEEEEecCCCEEEEEEEEEecCCCEEEEEEccCc---eeEEEeeccccc
Confidence 457999999999865556779999998877778889987665 345777888764
No 334
>3pnr_B Pbicp-C; immunoglobulin fold, hydrolase-hydrolase inhibitor complex; 2.60A {Plasmodium berghei}
Probab=42.40 E-value=5.3 Score=38.95 Aligned_cols=25 Identities=24% Similarity=0.211 Sum_probs=19.3
Q ss_pred cCcccceeecCCCCccccccccccc
Q psy11975 295 LDLTGVFSALPTPFREDEEIDFEKF 319 (786)
Q Consensus 295 ~~~~g~~~~~~~~~re~~~~~~e~~ 319 (786)
-+|+|-+=+|----|++-.++.|+|
T Consensus 62 ~~GnGylW~LLGVhK~~P~InPe~F 86 (187)
T 3pnr_B 62 NAGTGYLWVLLGIHKDEPIINPENF 86 (187)
T ss_dssp ETTSSCEEEEEEEESSCCCCCGGGS
T ss_pred cCCceEEEEEeeecccCCccChhHC
Confidence 5788888777766677778888877
No 335
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=42.39 E-value=5.3 Score=41.62 Aligned_cols=11 Identities=9% Similarity=0.214 Sum_probs=7.1
Q ss_pred CCEEEEeCCCC
Q psy11975 574 IPVIIYNNTFV 584 (786)
Q Consensus 574 LPIiLYNiP~~ 584 (786)
-.++|.|.|..
T Consensus 214 yD~VIIDtpp~ 224 (299)
T 3cio_A 214 YDLVIVDTPPM 224 (299)
T ss_dssp CSEEEEECCCT
T ss_pred CCEEEEcCCCC
Confidence 45777777653
No 336
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=42.30 E-value=45 Score=37.98 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCC----CCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCCC
Q psy11975 527 RATIDLTQKAAKAGANAALILCP----YYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHEN 602 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPP----yY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiPN 602 (786)
.+++++++.++++||+.+++..- .+..++ ++.+++|++++++|||. .|---+++.+.++.+.-+
T Consensus 452 ~~~~e~a~~~~~~Ga~~il~t~~~~dG~~~G~d------~~li~~l~~~~~iPVIa------sGGi~s~~d~~~~~~~~G 519 (555)
T 1jvn_A 452 LGVWELTRACEALGAGEILLNCIDKDGSNSGYD------LELIEHVKDAVKIPVIA------SSGAGVPEHFEEAFLKTR 519 (555)
T ss_dssp EEHHHHHHHHHHTTCCEEEECCGGGTTTCSCCC------HHHHHHHHHHCSSCEEE------CSCCCSHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHcCCCEEEEeCCCCCCCCCCCC------HHHHHHHHHhCCccEEE------ECCCCCHHHHHHHHHhcC
Confidence 35789999999999999998642 122222 56778888889999874 354567888888875324
Q ss_pred EEEEEeC--------CHHHHHHHHh
Q psy11975 603 IRGVKDT--------DNIKLANMAN 619 (786)
Q Consensus 603 VVGIKDS--------Dl~ri~~ll~ 619 (786)
+.|+=-. ++.++.++++
T Consensus 520 ~~gvivg~a~~~~~~~~~e~~~~l~ 544 (555)
T 1jvn_A 520 ADACLGAGMFHRGEFTVNDVKEYLL 544 (555)
T ss_dssp CSEEEESHHHHTTSCCHHHHHHHHH
T ss_pred ChHHHHHHHHHcCCCCHHHHHHHHH
Confidence 4444333 4566665554
No 337
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=42.22 E-value=1.9e+02 Score=30.73 Aligned_cols=106 Identities=11% Similarity=0.086 Sum_probs=70.3
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSpe 592 (786)
++|+...++..+.++.++.|+.+.+.|.+++=+-.-. +.+..++.+++|-+++ +++|.+ |.- .| ++.+
T Consensus 136 ~v~~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~gd~~l~v-D~n--~~--~~~~ 204 (384)
T 2pgw_A 136 AVGYFYFLQGETAEELARDAAVGHAQGERVFYLKVGR------GEKLDLEITAAVRGEIGDARLRL-DAN--EG--WSVH 204 (384)
T ss_dssp EEEBCEECCCSSHHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHHTTSTTCEEEE-ECT--TC--CCHH
T ss_pred ceEEEEECCCCCHHHHHHHHHHHHHcCCCEEEECcCC------CHHHHHHHHHHHHHHcCCcEEEE-ecC--CC--CCHH
Confidence 5677666666788999999999999999999874211 2677788899999888 588877 542 33 4555
Q ss_pred HHHHHH---hCCCEEEEEeC----CHHHHHHHHhhcCCCCEEEEeCCc
Q psy11975 593 TLVKLA---HHENIRGVKDT----DNIKLANMANQTKDLNFSVFAGSA 633 (786)
Q Consensus 593 lL~rLA---eiPNVVGIKDS----Dl~ri~~ll~~~~~~df~Vf~G~D 633 (786)
...+++ +--+|..|-+- |+..+.++.++ . ++.|..+..
T Consensus 205 ~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~-~--~iPI~~de~ 249 (384)
T 2pgw_A 205 DAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREK-V--GIPIVADQA 249 (384)
T ss_dssp HHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHH-C--SSCEEESTT
T ss_pred HHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhh-C--CCCEEEeCC
Confidence 544444 21235555554 67777777653 2 456665543
No 338
>2fyw_A Conserved hypothetical protein; structural genomics, PSI, midwest CENT structural genomics, MCSG, protein structure initiative; 2.40A {Streptococcus pneumoniae} SCOP: c.135.1.1
Probab=42.03 E-value=54 Score=33.78 Aligned_cols=62 Identities=11% Similarity=0.204 Sum_probs=38.6
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCC--CCHHHH-HHHHHHHHhcCCCCEEEEeCCC
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKK--MTEDLI-YEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps--~S~eeL-v~YFraIAeAtdLPIiLYNiP~ 583 (786)
.|++++-.+ .+++ +.|.+.|||.|++-=|++|++. ++.+.. .+-+..+. .-+|.+|-||-|-
T Consensus 40 ~I~~alD~t--~~vi---~eAi~~gadlIitHHP~~f~~~~~~~~~~~~~~~i~~li-~~~I~lya~Ht~l 104 (267)
T 2fyw_A 40 RVMVALDIR--EETV---AEAIEKGVDLIIVKHAPIFRPIKDLLASRPQNQIYIDLI-KHDIAVYVSHTNI 104 (267)
T ss_dssp EEEEESCCC--HHHH---HHHHHTTCSEEEESSCSCCSCCCCCCTTSHHHHHHHHHH-HTTCEEEECSHHH
T ss_pred EEEEEEcCC--HHHH---HHHHHCCCCEEEECCccccCCccccccCchHHHHHHHHH-HCCCeEEEeeccc
Confidence 356666552 4444 6778899999999999998753 112222 22222222 3489999998764
No 339
>1jxh_A Phosphomethylpyrimidine kinase; THID, ribokinase family, phophorylation, transferase; 2.30A {Salmonella typhimurium} SCOP: c.72.1.2 PDB: 1jxi_A*
Probab=42.00 E-value=5.4 Score=40.86 Aligned_cols=21 Identities=14% Similarity=0.211 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHcCCCEEEEc
Q psy11975 527 RATIDLTQKAAKAGANAALIL 547 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmVi 547 (786)
++..+.++...+.|+..|++.
T Consensus 178 ~~~~~~a~~l~~~g~~~Vvvt 198 (288)
T 1jxh_A 178 QEMLAQGRALLAMGCEAVLMK 198 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEEEB
T ss_pred HHHHHHHHHHHHhCCCEEEEe
Confidence 444444444444555555444
No 340
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=41.96 E-value=46 Score=35.08 Aligned_cols=49 Identities=20% Similarity=0.293 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCC-EE
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIP-VI 577 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLP-Ii 577 (786)
+-..+.++.+.++|||.+=+-+|.+-.. +.+++.+.++...+.+++| |+
T Consensus 177 ~~v~~aa~~a~~lGaD~iKv~~~~~~~g--~~~~~~~vv~~~~~~~~~P~Vv 226 (304)
T 1to3_A 177 QAIIDAAKELGDSGADLYKVEMPLYGKG--ARSDLLTASQRLNGHINMPWVI 226 (304)
T ss_dssp HHHHHHHHHHTTSSCSEEEECCGGGGCS--CHHHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCcCCCC--CHHHHHHHHHhccccCCCCeEE
Confidence 3344449999999999887877765222 3777777777766668899 44
No 341
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=41.88 E-value=42 Score=35.01 Aligned_cols=54 Identities=9% Similarity=-0.076 Sum_probs=43.7
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEE
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIY 579 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLY 579 (786)
..+.++++++++.+.++|||.+.+..-.-. .+++++.+.+++|.+.+ ++||.++
T Consensus 155 ~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~---~~P~~~~~lv~~l~~~~~~~~l~~H 209 (302)
T 2ftp_A 155 DVDPRQVAWVARELQQMGCYEVSLGDTIGV---GTAGATRRLIEAVASEVPRERLAGH 209 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEESSSC---CCHHHHHHHHHHHTTTSCGGGEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCC---cCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 367899999999999999998888744322 25899999999999888 5888776
No 342
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=41.81 E-value=21 Score=38.54 Aligned_cols=49 Identities=24% Similarity=0.263 Sum_probs=34.9
Q ss_pred HHHHHHHHHcCCCEEEEcCC-----CCCCC--CCCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 530 IDLTQKAAKAGANAALILCP-----YYFQK--KMTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPP-----yY~kp--s~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
.+.|+.|+++||++||++.| .|+.- -+.+ .++.++|-+++++||+.=..
T Consensus 27 ~e~A~~ae~aGA~aI~~l~~v~~d~~~~~G~arm~~---p~~i~~I~~av~iPV~~K~r 82 (330)
T 2yzr_A 27 VEQAQIAEEAGAVAVMALERVPADIRAAGGVARMSD---PALIEEIMDAVSIPVMAKCR 82 (330)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHC--CCCCCCCC---HHHHHHHHHHCSSCEEEEEE
T ss_pred HHHHHHHHHcCCCEEEecCCccccccCCcchhhcCC---HHHHHHHHHhcCCCeEEEEe
Confidence 67899999999999999853 23332 0111 35677788899999998874
No 343
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=41.79 E-value=29 Score=36.71 Aligned_cols=103 Identities=10% Similarity=0.066 Sum_probs=68.1
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+-+ ++.+.++++++++..++.|++.+ --|+ .+. -.+.+++|.+++++||+.=. ...+++
T Consensus 189 ~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--E~P~--~~~-----~~~~~~~l~~~~~iPI~~de------~~~~~~ 253 (359)
T 1mdl_A 189 DFGIMVDYNQSLDVPAAIKRSQALQQEGVTWI--EEPT--LQH-----DYEGHQRIQSKLNVPVQMGE------NWLGPE 253 (359)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHHHHTCSCE--ECCS--CTT-----CHHHHHHHHHTCSSCEEECT------TCCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHhCCCeE--ECCC--Chh-----hHHHHHHHHHhCCCCEEeCC------CCCCHH
Confidence 45666633 45689999999999999999864 3443 221 25677888888899988643 345688
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+.++.+ .-+++-+|-. .+....++.+....-++.++.|
T Consensus 254 ~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 254 EMFKALSIGACRLAMPDAMKIGGVTGWIRASALAQQFGIPMSSH 297 (359)
T ss_dssp HHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHTTCCBCCB
T ss_pred HHHHHHHcCCCCEEeecchhhCCHHHHHHHHHHHHHcCCeEeec
Confidence 8888874 4689999988 4554444433111234555544
No 344
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=41.78 E-value=1.1e+02 Score=30.12 Aligned_cols=81 Identities=17% Similarity=0.133 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCC-CCCH---HHHHHHHHHHHhc-CCCCEEEEeCCCCcC-CccCHHHHHHHHh-C
Q psy11975 528 ATIDLTQKAAKAGANAALILCPYYFQK-KMTE---DLIYEHFISVADN-SPIPVIIYNNTFVTN-IDISVDTLVKLAH-H 600 (786)
Q Consensus 528 EAIELAr~Ae~aGADAVmViPPyY~kp-s~S~---eeLv~YFraIAeA-tdLPIiLYNiP~~TG-v~LSpelL~rLAe-i 600 (786)
...+.++.|+++||..|.+.+...... + .+ +.+++.++.++++ .++.|.+=|.+.... ..-+++.+.+|.+ +
T Consensus 90 ~~~~~i~~A~~lGa~~v~~~~g~~~~~~~-~~~~~~~~~~~l~~l~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v 168 (285)
T 1qtw_A 90 AFIDEMQRCEQLGLSLLNFHPGSHLMQIS-EEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGV 168 (285)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBCTTTSC-HHHHHHHHHHHHHHHHHHCSSCEEEEECCCCCTTBCCSSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCCEEEECcCCCCCCCC-HHHHHHHHHHHHHHHHhccCCCEEEEecCCCCCCcccCCHHHHHHHHHhh
Confidence 445667888899999998877654322 1 12 3356677777655 479888888864321 2236888888873 5
Q ss_pred ---CCEEEEEeC
Q psy11975 601 ---ENIRGVKDT 609 (786)
Q Consensus 601 ---PNVVGIKDS 609 (786)
|||--.=|+
T Consensus 169 ~~~~~~g~~~D~ 180 (285)
T 1qtw_A 169 EDKSRVGVCIDT 180 (285)
T ss_dssp SCGGGEEEEEEH
T ss_pred cCccceEEEEEh
Confidence 676555554
No 345
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=41.74 E-value=39 Score=37.74 Aligned_cols=59 Identities=10% Similarity=0.018 Sum_probs=35.5
Q ss_pred CCeEEEe-CCCCCHHHHHHHHHHHHHcCCCEEEEcC-CCCCC-------CCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 514 QADLLKP-QKHTTTRATIDLTQKAAKAGANAALILC-PYYFQ-------KKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 514 RVPVIaG-VGa~ST~EAIELAr~Ae~aGADAVmViP-PyY~k-------ps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
++||++| | .+.+.|+.++++|||+|.+.. |-... .+..+...+....+++++.++||+.
T Consensus 296 ~~pvi~~~v------~t~~~a~~l~~aGad~I~vg~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia 363 (514)
T 1jcn_A 296 HLQVIGGNV------VTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIA 363 (514)
T ss_dssp TCEEEEEEE------CSHHHHHHHHHHTCSEEEECSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEE
T ss_pred CCceEeccc------chHHHHHHHHHcCCCEEEECCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEE
Confidence 6899984 5 235568899999999999832 21110 0011344456666666666666653
No 346
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=41.65 E-value=16 Score=30.43 Aligned_cols=58 Identities=10% Similarity=0.140 Sum_probs=42.3
Q ss_pred cCCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCC--Cccccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSN--EPLSEVEPATLKSL 410 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~--~a~s~V~~k~LkpF 410 (786)
....|.+|..+=|.-+--||+||.|..-....+.++|.|-|-.. -.|..++...|.|.
T Consensus 9 ~~~~F~vGmkLEa~d~~~p~~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 9 RGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp TTCCCSTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CCCCcCCCCEEEEEECCCCccccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 34579999999888888889999999864345789999988653 13554555556653
No 347
>2ygr_A Uvrabc system protein A; hydrolase, nucleotide excision repair; 3.40A {Mycobacterium tuberculosis} PDB: 3zqj_A
Probab=41.57 E-value=5.5 Score=48.77 Aligned_cols=22 Identities=18% Similarity=0.258 Sum_probs=16.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHc
Q psy11975 717 RRPLPAALKPGGAEKIKQVLTEA 739 (786)
Q Consensus 717 R~PL~~pLseeekaeL~~~L~~l 739 (786)
=-|.. .|+...+++|.++|+++
T Consensus 891 DEPTs-GLD~~~~~~l~~lL~~L 912 (993)
T 2ygr_A 891 DEPTT-GLHFDDIRKLLNVINGL 912 (993)
T ss_dssp ESTTT-TCCHHHHHHHHHHHHHH
T ss_pred ECCCC-CCCHHHHHHHHHHHHHH
Confidence 34777 88888888888887765
No 348
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=41.51 E-value=37 Score=36.01 Aligned_cols=28 Identities=18% Similarity=0.150 Sum_probs=21.4
Q ss_pred CeEEEe-CCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q psy11975 515 ADLLKP-QKHTTTRATIDLTQKAAKAGANAALILC 548 (786)
Q Consensus 515 VPVIaG-VGa~ST~EAIELAr~Ae~aGADAVmViP 548 (786)
.+|+.| +. + .+.|+.|+++|||+|.+..
T Consensus 150 ~~vi~G~v~--s----~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 150 SFVIAGNVG--T----PEAVRELENAGADATKVGI 178 (336)
T ss_dssp SEEEEEEEC--S----HHHHHHHHHHTCSEEEECS
T ss_pred CEEEECCcC--C----HHHHHHHHHcCCCEEEEec
Confidence 567777 43 2 4688899999999999953
No 349
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=41.43 E-value=41 Score=36.34 Aligned_cols=106 Identities=10% Similarity=0.017 Sum_probs=69.9
Q ss_pred CCCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
+.++++++-+ ++.+.++++++++..++.|++. +--|. .+. -++.+++|.+++++||+.=.. ..+
T Consensus 216 G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~--iE~P~--~~~-----~~~~~~~l~~~~~iPIa~dE~------~~~ 280 (410)
T 2gl5_A 216 GDDADIIVEIHSLLGTNSAIQFAKAIEKYRIFL--YEEPI--HPL-----NSDNMQKVSRSTTIPIATGER------SYT 280 (410)
T ss_dssp CSSSEEEEECTTCSCHHHHHHHHHHHGGGCEEE--EECSS--CSS-----CHHHHHHHHHHCSSCEEECTT------CCT
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHhcCCCe--EECCC--Chh-----hHHHHHHHHhhCCCCEEecCC------cCC
Confidence 3456676633 4568999999999999988764 44553 122 256778888889999987542 346
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
++.+.++.+ .-+++-+|-. .+....++.+....-++.+..+.
T Consensus 281 ~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~ 327 (410)
T 2gl5_A 281 RWGYRELLEKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQVHV 327 (410)
T ss_dssp THHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEECCCC
T ss_pred HHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 788888874 4689999998 45554444432223456655543
No 350
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=41.40 E-value=22 Score=40.36 Aligned_cols=29 Identities=14% Similarity=0.170 Sum_probs=22.8
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAKAGANAALILC 548 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmViP 548 (786)
++||++ |+.. .+.|+.|+++|||+|.+..
T Consensus 343 ~~PvivKgv~~------~e~A~~a~~aGad~I~vs~ 372 (511)
T 1kbi_A 343 KLPIVIKGVQR------TEDVIKAAEIGVSGVVLSN 372 (511)
T ss_dssp SSCEEEEEECS------HHHHHHHHHTTCSEEEECC
T ss_pred CCcEEEEeCCC------HHHHHHHHHcCCCEEEEcC
Confidence 468888 5653 5668899999999999954
No 351
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=41.34 E-value=46 Score=36.47 Aligned_cols=89 Identities=4% Similarity=0.001 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHHHcC------CCEEEEcCCCCCC----CC--CCHH-HHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 524 TTTRATIDLTQKAAKAG------ANAALILCPYYFQ----KK--MTED-LIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aG------ADAVmViPPyY~k----ps--~S~e-eLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
.+.++++++++.++++| +|++-+..+.+.. +. +... .-.++.+.|.+++++||+.= .| ++
T Consensus 257 ~~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~-----G~--i~ 329 (402)
T 2hsa_B 257 NPLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICS-----GG--YT 329 (402)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEE-----SS--CC
T ss_pred CCHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEe-----CC--CC
Confidence 35688999999999999 9999998765422 10 0011 23677788888899998752 23 38
Q ss_pred HHHHHHHHhCC--CEEEEEeC---CHHHHHHHHh
Q psy11975 591 VDTLVKLAHHE--NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 591 pelL~rLAeiP--NVVGIKDS---Dl~ri~~ll~ 619 (786)
++...++.+.. .+|++=-. |+.-+.++.+
T Consensus 330 ~~~a~~~l~~g~aD~V~igR~~l~dP~l~~k~~~ 363 (402)
T 2hsa_B 330 RELGIEAVAQGDADLVSYGRLFISNPDLVMRIKL 363 (402)
T ss_dssp HHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHH
T ss_pred HHHHHHHHHCCCCceeeecHHHHhCchHHHHHHh
Confidence 89888888644 44444333 6666666654
No 352
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=41.00 E-value=55 Score=35.35 Aligned_cols=105 Identities=9% Similarity=0.049 Sum_probs=69.7
Q ss_pred CCCeEE-EeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 513 WQADLL-KPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 513 GRVPVI-aGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
.+++++ +=+ ++-+.++++++++..++.|++...+--|.. +. + ++.+++|.+++++|| + ....+
T Consensus 185 ~~~~l~~vDan~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~--~~----d-~~~~~~l~~~~~iPI---d-----E~~~~ 249 (391)
T 3gd6_A 185 SRVRIKSYDFSHLLNWKDAHRAIKRLTKYDLGLEMIESPAP--RN----D-FDGLYQLRLKTDYPI---S-----EHVWS 249 (391)
T ss_dssp GGCEEEEEECTTCSCHHHHHHHHHHHTTCCSSCCEEECCSC--TT----C-HHHHHHHHHHCSSCE---E-----EECCC
T ss_pred CCCcEEEecCCCCcCHHHHHHHHHHHHhcCCCcceecCCCC--hh----h-HHHHHHHHHHcCCCc---C-----CCCCC
Confidence 345666 522 456899999999999999984334455642 22 1 566788999999998 3 22456
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.+.++.+ .-.++-+|-+ .+....++......-++.+..|.
T Consensus 250 ~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~ 296 (391)
T 3gd6_A 250 FKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGT 296 (391)
T ss_dssp HHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecC
Confidence 888888873 5689999988 56555444332223457777654
No 353
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=40.86 E-value=16 Score=38.52 Aligned_cols=73 Identities=16% Similarity=0.023 Sum_probs=46.9
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC-CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQ-KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~k-ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.++|++.+. +++.++.+++.|+|++.+..+.... .+ ......++.+|.+++++||++= .|+ -+++
T Consensus 110 g~~v~~~v~------~~~~a~~~~~~GaD~i~v~g~~~GG~~g--~~~~~~ll~~i~~~~~iPViaa-----GGI-~~~~ 175 (332)
T 2z6i_A 110 GIIVIPVVP------SVALAKRMEKIGADAVIAEGMEAGGHIG--KLTTMTLVRQVATAISIPVIAA-----GGI-ADGE 175 (332)
T ss_dssp TCEEEEEES------SHHHHHHHHHTTCSCEEEECTTSSEECC--SSCHHHHHHHHHHHCSSCEEEE-----SSC-CSHH
T ss_pred CCeEEEEeC------CHHHHHHHHHcCCCEEEEECCCCCCCCC--CccHHHHHHHHHHhcCCCEEEE-----CCC-CCHH
Confidence 478887763 3456788899999999997542111 01 1123577888888889998753 232 2477
Q ss_pred HHHHHHhC
Q psy11975 593 TLVKLAHH 600 (786)
Q Consensus 593 lL~rLAei 600 (786)
.+.++.+.
T Consensus 176 ~~~~al~~ 183 (332)
T 2z6i_A 176 GAAAGFML 183 (332)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 77776543
No 354
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=40.79 E-value=2.9e+02 Score=27.64 Aligned_cols=123 Identities=11% Similarity=0.068 Sum_probs=69.2
Q ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-CCEEEEEeC
Q psy11975 531 DLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH-ENIRGVKDT 609 (786)
Q Consensus 531 ELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei-PNVVGIKDS 609 (786)
+.++.|.++|||+|++ |. ++.++++..+ ..+.|+++ | -.++..+.+..+. ..++++ +.
T Consensus 80 d~~~~A~~aGAd~v~~--p~------~d~~v~~~ar----~~g~~~i~-------G-v~t~~e~~~A~~~Gad~vk~-Fp 138 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVT--PG------LNPKIVKLCQ----DLNFPITP-------G-VNNPMAIEIALEMGISAVKF-FP 138 (224)
T ss_dssp HHHHHHHHHTCSEEEC--SS------CCHHHHHHHH----HTTCCEEC-------E-ECSHHHHHHHHHTTCCEEEE-TT
T ss_pred HHHHHHHHCCCCEEEE--CC------CCHHHHHHHH----HhCCCEEe-------c-cCCHHHHHHHHHCCCCEEEE-ee
Confidence 7788889999999942 22 1445555444 35677764 3 2456666555443 355555 43
Q ss_pred --C---HHHHHHHHhhcC-CCCEEEEeCCc-chhhhhhcc-CCccccccccccccHHHHHHHHHHHcCCHHHHHHHHHHh
Q psy11975 610 --D---NIKLANMANQTK-DLNFSVFAGSA-GYLLSGLLV-GCAGGINALSAVLGGPICELYDLAKAGKWEEAMKLQHRL 681 (786)
Q Consensus 610 --D---l~ri~~ll~~~~-~~df~Vf~G~D-elLL~aL~~-GAdG~Isg~aN~~Pel~vaL~eA~~aGD~eeAreLQ~rL 681 (786)
. +..+.++.. .. .-.|-...|-+ +.+.+.+.+ |++|+. + +.+++... .++||+++..++-+++
T Consensus 139 a~~~gG~~~lk~l~~-~~~~ipvvaiGGI~~~N~~~~l~agga~~v~-g-S~i~~~~~------i~~~~~~~i~~~a~~~ 209 (224)
T 1vhc_A 139 AEASGGVKMIKALLG-PYAQLQIMPTGGIGLHNIRDYLAIPNIVACG-G-SWFVEKKL------IQSNNWDEIGRLVREV 209 (224)
T ss_dssp TTTTTHHHHHHHHHT-TTTTCEEEEBSSCCTTTHHHHHTSTTBCCEE-E-CGGGCHHH------HHTTCHHHHHHHHHHH
T ss_pred CccccCHHHHHHHHh-hCCCCeEEEECCcCHHHHHHHHhcCCCEEEE-E-chhcCcch------hccCCHHHHHHHHHHH
Confidence 2 455555544 22 22333355555 346677787 666655 4 44555332 3578988776665554
Q ss_pred hh
Q psy11975 682 VK 683 (786)
Q Consensus 682 ~p 683 (786)
..
T Consensus 210 ~~ 211 (224)
T 1vhc_A 210 ID 211 (224)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 355
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=40.69 E-value=1.1e+02 Score=30.51 Aligned_cols=65 Identities=15% Similarity=0.131 Sum_probs=42.7
Q ss_pred cccccccceecCCCCCCCCCCCCCCchhhhhcccCCCCCCCceEEEecc-cCCCCCccccCCCCC-CCcEEEEEeCCC
Q psy11975 320 KFNVSKWEKVPLKGSDSDHSADSDDDSAVATTTKLLGLAEGDLVWGSVK-GYPSWPGKLISPAPT-QGRVWVKWFGMS 395 (786)
Q Consensus 320 k~~vs~~e~~~l~~~~~~~~~~~~~~~~e~~~~~~~~f~vGDLVWaKvk-G~PwWPg~V~~~~~~-~g~~~V~fFG~~ 395 (786)
++++++.++.+|-.....+..+ ....|..|+.|.|--. --...||.|+..+.. .+.|.|.|=|+.
T Consensus 91 ~~~~s~~~IIPLP~~~a~p~t~-----------~~~~f~~G~~VLAlYP~TT~FY~A~V~~~p~~~~~~y~L~FEdde 157 (180)
T 3mea_A 91 RHTLSRRRVIPLPQWKANPETD-----------PEALFQKEQLVLALYPQTTCFYRALIHAPPQRPQDDYSVLFEDTS 157 (180)
T ss_dssp EEEEEGGGEEECCSBBCCTTTC-----------GGGSCCTTCEEEEECTTSSEEEEEEEEECCSSTTCCEEEEEBCTT
T ss_pred eEEeCHHHEEECCCcCCCcccC-----------ccccCCCCCEEEEeCCCCceeeEEEEecCCCCCCCcEEEEEcCCC
Confidence 4666787888776543322211 1235999999999732 233567888887754 368999988775
No 356
>1r17_A Fibrinogen-binding protein SDRG; SDRG, mscramm-ligand complex, SDRG-fibrinopeptide complex, cell adhesion; 1.86A {Staphylococcus epidermidis} SCOP: b.2.3.4 b.2.3.4 PDB: 1r19_A 2ral_A
Probab=40.66 E-value=5.8 Score=42.70 Aligned_cols=7 Identities=86% Similarity=1.488 Sum_probs=0.0
Q ss_pred CCCCCCC
Q psy11975 201 GRSHHHS 207 (786)
Q Consensus 201 ~~~~~~~ 207 (786)
||||||+
T Consensus 2 ~~~~~~~ 8 (343)
T 1r17_A 2 GRSHHHH 8 (343)
T ss_dssp -------
T ss_pred Ccccccc
Confidence 6777653
No 357
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=40.57 E-value=1.4e+02 Score=31.97 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=68.7
Q ss_pred CCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 513 WQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 513 GRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
.++++++=+ ++-+.++++++++..++.|+ .+--|.- . .+.+++|.+++++||+.=. ...++
T Consensus 188 ~~~~l~vDan~~~~~~~a~~~~~~l~~~~i---~iEqP~~---~------~~~~~~l~~~~~iPIa~dE------~~~~~ 249 (378)
T 3eez_A 188 PGEIVLYDVNRGWTRQQALRVMRATEDLHV---MFEQPGE---T------LDDIAAIRPLHSAPVSVDE------CLVTL 249 (378)
T ss_dssp TTCEEEEECTTCCCHHHHHHHHHHTGGGTC---CEECCSS---S------HHHHHHTGGGCCCCEEECT------TCCSH
T ss_pred CCceEEEECCCCCCHHHHHHHHHHhccCCe---EEecCCC---C------HHHHHHHHhhCCCCEEECC------CCCCH
Confidence 356676633 35689999999999999876 3444542 2 3557888899999998633 34568
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
+.+.++.+ --.++-+|-+ .+....++......-++.+..|.
T Consensus 250 ~~~~~~l~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~g~~~~~~~ 295 (378)
T 3eez_A 250 QDAARVARDGLAEVFGIKLNRVGGLTRAARMRDIALTHGIDMFVMA 295 (378)
T ss_dssp HHHHHHHHTTCCSEEEEEHHHHTSHHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHcCCCCEEEeCchhcCCHHHHHHHHHHHHHcCCEEEcCC
Confidence 88888884 4689999988 56555544332223457776553
No 358
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=40.36 E-value=39 Score=34.54 Aligned_cols=43 Identities=19% Similarity=0.257 Sum_probs=34.6
Q ss_pred HHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Q psy11975 532 LTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIY 579 (786)
Q Consensus 532 LAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLY 579 (786)
.++.+.+.|+|++++-- ..+.+.+.+.+..++|.+ +++|++++
T Consensus 23 ~~~~~~~~GtD~i~vGG----s~gvt~~~~~~~v~~ik~-~~~Pvvlf 65 (228)
T 3vzx_A 23 QLEILCESGTDAVIIGG----SDGVTEDNVLRMMSKVRR-FLVPCVLE 65 (228)
T ss_dssp HHHHHHTSSCSEEEECC----CSCCCHHHHHHHHHHHTT-SSSCEEEE
T ss_pred HHHHHHHcCCCEEEECC----cCCCCHHHHHHHHHHhhc-cCCCEEEe
Confidence 34445789999999986 222469999999999988 99999994
No 359
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=40.29 E-value=39 Score=35.75 Aligned_cols=56 Identities=9% Similarity=0.109 Sum_probs=43.7
Q ss_pred CCCeEEEeCC-CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHh
Q psy11975 513 WQADLLKPQK-HTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVAD 570 (786)
Q Consensus 513 GRVPVIaGVG-a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAe 570 (786)
.++||++-=| ..+.+++++.++.|.++||+++.+.--.|..+. +..+.+-+.+|..
T Consensus 222 ~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~d--p~~~~~al~~ivh 278 (295)
T 3glc_A 222 CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDH--PVAMMKAVQAVVH 278 (295)
T ss_dssp CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSS--HHHHHHHHHHHHH
T ss_pred CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcC--HHHHHHHHHHHHh
Confidence 4688887222 236899999999999999999999988777765 7777777777653
No 360
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=40.21 E-value=52 Score=34.45 Aligned_cols=74 Identities=14% Similarity=0.037 Sum_probs=45.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCC-CCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQK-KMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kp-s~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.++|+..+.. .+.++.+++.|+|++++..+-.... +.......+.+.+|.+++++||++= .|+ -+++
T Consensus 118 gi~vi~~v~t------~~~a~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~~iPviaa-----GGI-~~~~ 185 (328)
T 2gjl_A 118 GVKVIHKCTA------VRHALKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRLRVPIIAS-----GGF-ADGR 185 (328)
T ss_dssp TCEEEEEESS------HHHHHHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTCCSCEEEE-----SSC-CSHH
T ss_pred CCCEEeeCCC------HHHHHHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhcCCCEEEE-----CCC-CCHH
Confidence 4678877642 3456778899999999976533111 1000124577888888888998753 232 2566
Q ss_pred HHHHHHh
Q psy11975 593 TLVKLAH 599 (786)
Q Consensus 593 lL~rLAe 599 (786)
.+.++.+
T Consensus 186 ~v~~al~ 192 (328)
T 2gjl_A 186 GLVAALA 192 (328)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666543
No 361
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=39.96 E-value=1.5e+02 Score=31.87 Aligned_cols=100 Identities=11% Similarity=0.102 Sum_probs=66.1
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSp 591 (786)
++++++-+ ++.+.++++++++..++.|.+-..+--|. .+. -++.+++|.+++ ++||+.=. .. ++
T Consensus 190 ~~~l~vDan~~~~~~~a~~~~~~l~~~g~~i~~iEqP~--~~~-----~~~~~~~l~~~~~~iPIa~dE------~~-~~ 255 (389)
T 2oz8_A 190 GSKVMIDPNEAWTSKEALTKLVAIREAGHDLLWVEDPI--LRH-----DHDGLRTLRHAVTWTQINSGE------YL-DL 255 (389)
T ss_dssp TCEEEEECTTCBCHHHHHHHHHHHHHTTCCCSEEESCB--CTT-----CHHHHHHHHHHCCSSEEEECT------TC-CH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHhcCCCceEEeCCC--CCc-----CHHHHHHHHhhCCCCCEEeCC------CC-CH
Confidence 45666633 45689999999999999444433555554 221 256678888888 89987643 23 78
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
+.+.++.+ .-+++-+| . ...++.++.+. -++.++.|
T Consensus 256 ~~~~~~i~~~~~d~v~ik-GGit~a~~i~~~A~~---~gi~~~~~ 296 (389)
T 2oz8_A 256 QGKRLLLEAHAADILNVH-GQVTDVMRIGWLAAE---LGIPISIG 296 (389)
T ss_dssp HHHHHHHHTTCCSEEEEC-SCHHHHHHHHHHHHH---HTCCEEEC
T ss_pred HHHHHHHHcCCCCEEEEC-cCHHHHHHHHHHHHH---cCCeEeec
Confidence 88888874 46899999 7 34455555442 24666666
No 362
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=39.93 E-value=1.2e+02 Score=31.11 Aligned_cols=120 Identities=15% Similarity=0.103 Sum_probs=77.0
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC---CCCE-EEEeCCCCcCCccCHHHHHHH
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS---PIPV-IIYNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt---dLPI-iLYNiP~~TGv~LSpelL~rL 597 (786)
|..+++.-+..++.|.+.|||.|-+..++-. .. + .+.+-..+|.+++ ++|+ +++.. + .|+.+.+.+.
T Consensus 83 G~~~~~~k~~e~~~Av~~GAdEID~vinig~-~~--~-~v~~ei~~v~~a~~~~g~~lKvIlEt----~-~L~~e~i~~a 153 (234)
T 1n7k_A 83 GQAPLEVKLVEAQTVLEAGATELDVVPHLSL-GP--E-AVYREVSGIVKLAKSYGAVVKVILEA----P-LWDDKTLSLL 153 (234)
T ss_dssp CCSCHHHHHHHHHHHHHHTCCEEEECCCGGG-CH--H-HHHHHHHHHHHHHHHTTCEEEEECCG----G-GSCHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEeccchH-HH--H-HHHHHHHHHHHHHhhcCCeEEEEEec----c-CCCHHHHHHH
Confidence 3477888899999999999999988876542 22 3 7788888888876 3665 24443 2 2567776655
Q ss_pred Hh---CCCEEEEEeC---C------HHHHHH--HHhhcCCCCEEEEeCCc--chhhhhhccCCc--cccccc
Q psy11975 598 AH---HENIRGVKDT---D------NIKLAN--MANQTKDLNFSVFAGSA--GYLLSGLLVGCA--GGINAL 651 (786)
Q Consensus 598 Ae---iPNVVGIKDS---D------l~ri~~--ll~~~~~~df~Vf~G~D--elLL~aL~~GAd--G~Isg~ 651 (786)
++ .-..-.||-+ . +..+.. +.+ ..+-.+.+-.|-- +.++..+.+|++ |..++.
T Consensus 154 ~ria~eaGADfVKTsTG~~~~~gAt~~dv~l~~m~~-~v~v~VKaaGGirt~~~al~~i~aGa~RiG~S~g~ 224 (234)
T 1n7k_A 154 VDSSRRAGADIVKTSTGVYTKGGDPVTVFRLASLAK-PLGMGVKASGGIRSGIDAVLAVGAGADIIGTSSAV 224 (234)
T ss_dssp HHHHHHTTCSEEESCCSSSCCCCSHHHHHHHHHHHG-GGTCEEEEESSCCSHHHHHHHHHTTCSEEEETTHH
T ss_pred HHHHHHhCCCEEEeCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEecCCCCHHHHHHHHHcCccccchHHHH
Confidence 53 3567778887 2 333333 433 2333455555543 236667789998 776554
No 363
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=39.69 E-value=2.4e+02 Score=29.93 Aligned_cols=105 Identities=9% Similarity=-0.004 Sum_probs=70.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiLYNiP~~TGv~LSp 591 (786)
++|+..-++..+.++.++.|+.+.+.|.+++=+-.-. +.+..++.+++|-+++ +++|++ |.- .| ++.
T Consensus 134 ~v~~~~~~~~~~~~~~~~~a~~~~~~Gf~~iKik~g~------~~~~~~e~v~avr~a~g~d~~l~v-Dan--~~--~~~ 202 (379)
T 2rdx_A 134 GAPMYRVAPQRSEAETRAELARHRAAGYRQFQIKVGA------DWQSDIDRIRACLPLLEPGEKAMA-DAN--QG--WRV 202 (379)
T ss_dssp SEEBCEECCCSCSHHHHHHHHHHHHTTCCEEEEECCS------CHHHHHHHHHHHGGGSCTTCEEEE-ECT--TC--SCH
T ss_pred ceeEEEEecCCCHHHHHHHHHHHHHcCCCEEEEeccC------CHHHHHHHHHHHHHhcCCCCEEEE-ECC--CC--CCH
Confidence 5677666665678999999999999999999874321 2677789999999988 488876 542 23 456
Q ss_pred HHHHHHHh-C--CCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeCCc
Q psy11975 592 DTLVKLAH-H--ENIRGVKDT--DNIKLANMANQTKDLNFSVFAGSA 633 (786)
Q Consensus 592 elL~rLAe-i--PNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G~D 633 (786)
+...++++ + -+| .|-+- |+..+.++.++ -++.|..+..
T Consensus 203 ~~a~~~~~~l~~~~i-~iE~P~~~~~~~~~l~~~---~~iPI~~de~ 245 (379)
T 2rdx_A 203 DNAIRLARATRDLDY-ILEQPCRSYEECQQVRRV---ADQPMKLDEC 245 (379)
T ss_dssp HHHHHHHHHTTTSCC-EEECCSSSHHHHHHHHTT---CCSCEEECTT
T ss_pred HHHHHHHHHHHhCCe-EEeCCcCCHHHHHHHHhh---CCCCEEEeCC
Confidence 66655652 2 246 66555 67777666542 2456665543
No 364
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=39.44 E-value=1.7e+02 Score=30.76 Aligned_cols=99 Identities=15% Similarity=0.069 Sum_probs=62.2
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHH----HHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLI----YEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH- 600 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeL----v~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei- 600 (786)
++..++.++...++|||+|++.-+.-...-++++.. ..|+++|.++.+-.. ++++.+.+ ...+..+++.
T Consensus 189 ~~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~-iih~~g~~-----~~~l~~~~~~g 262 (348)
T 4ay7_A 189 TEASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVT-VLHICGNV-----NPILSDMADCG 262 (348)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEE-EEECCSCC-----HHHHHHHHTSC
T ss_pred HHHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCc-EEEecCCc-----HHHHHHHHHhc
Confidence 577888899999999999999877543211345554 456788998885322 34554321 3567777775
Q ss_pred CCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeCCcc
Q psy11975 601 ENIRGVKDT--DNIKLANMANQTKDLNFSVFAGSAG 634 (786)
Q Consensus 601 PNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G~De 634 (786)
..++++=.. ++....+.+ ++++.+..|.|.
T Consensus 263 ~d~i~~d~~~~~~~~~k~~~----g~~~~l~Gnldp 294 (348)
T 4ay7_A 263 FEGLSVEEKIGSAKKGKEVI----GTRARLVGNVSS 294 (348)
T ss_dssp CSEEECCGGGCCHHHHHHHH----TTSSEEEEEECC
T ss_pred cccccccchhhHHHHHHHHh----CCCEEEEcCCCC
Confidence 367776555 455544433 456666655453
No 365
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=39.43 E-value=66 Score=34.94 Aligned_cols=85 Identities=7% Similarity=-0.057 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC-
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE- 601 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP- 601 (786)
..+.++++++++.++++|+|.+-+..+.|..+.... + .+.|.+++++||+.= .| ++++...++.+..
T Consensus 262 ~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~----~-~~~ir~~~~iPvi~~-----G~--it~~~a~~~l~~g~ 329 (379)
T 3aty_A 262 SNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGD----V-VAWVRGSYSGVKISN-----LR--YDFEEADQQIREGK 329 (379)
T ss_dssp SCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCC----H-HHHHHTTCCSCEEEE-----SS--CCHHHHHHHHHTTS
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccH----H-HHHHHHHCCCcEEEE-----CC--CCHHHHHHHHHcCC
Confidence 346788999999999999999999875442221111 4 677788889998752 23 3789888888644
Q ss_pred -CEEEEEeC---CHHHHHHHHh
Q psy11975 602 -NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 602 -NVVGIKDS---Dl~ri~~ll~ 619 (786)
.+|++=-. |..-+.++.+
T Consensus 330 aD~V~igR~~l~~P~l~~k~~~ 351 (379)
T 3aty_A 330 VDAVAFGAKFIANPDLVERAQQ 351 (379)
T ss_dssp CSEEEESHHHHHCTTHHHHHHH
T ss_pred CeEEEecHHHHhCcHHHHHHHc
Confidence 44444333 6655555554
No 366
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=39.13 E-value=1.6e+02 Score=29.90 Aligned_cols=114 Identities=8% Similarity=0.044 Sum_probs=73.8
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHH
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTL 594 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL 594 (786)
.+||+=+-..+.++++++++.+.+.|++.+=+. +..+. -.+..++|.++.+-.++ -.|.-++++.+
T Consensus 13 ~~vi~Vir~~~~~~a~~~a~al~~gGi~~iEvt---~~t~~-----a~~~I~~l~~~~p~~~I------GAGTVlt~~~a 78 (217)
T 3lab_A 13 KPLIPVIVIDDLVHAIPMAKALVAGGVHLLEVT---LRTEA-----GLAAISAIKKAVPEAIV------GAGTVCTADDF 78 (217)
T ss_dssp CSEEEEECCSCGGGHHHHHHHHHHTTCCEEEEE---TTSTT-----HHHHHHHHHHHCTTSEE------EEECCCSHHHH
T ss_pred CCEEEEEEcCCHHHHHHHHHHHHHcCCCEEEEe---CCCcc-----HHHHHHHHHHHCCCCeE------eeccccCHHHH
Confidence 356666667788999999999999999999885 33333 45666777777654433 13677889988
Q ss_pred HHHHhC-CCEEEEEeC-CHHHHHHHHhhcCCCCE------EEEeCCcc--hhhhhhccCCccc
Q psy11975 595 VKLAHH-ENIRGVKDT-DNIKLANMANQTKDLNF------SVFAGSAG--YLLSGLLVGCAGG 647 (786)
Q Consensus 595 ~rLAei-PNVVGIKDS-Dl~ri~~ll~~~~~~df------~Vf~G~De--lLL~aL~~GAdG~ 647 (786)
.+..+- -.|+-. .. +.+-+..+.+ .++ .++-|... -+..++.+|++..
T Consensus 79 ~~ai~AGA~fivs-P~~~~evi~~~~~----~~v~~~~~~~~~PG~~TptE~~~A~~~Gad~v 136 (217)
T 3lab_A 79 QKAIDAGAQFIVS-PGLTPELIEKAKQ----VKLDGQWQGVFLPGVATASEVMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHTCSEEEE-SSCCHHHHHHHHH----HHHHCSCCCEEEEEECSHHHHHHHHHTTCCEE
T ss_pred HHHHHcCCCEEEe-CCCcHHHHHHHHH----cCCCccCCCeEeCCCCCHHHHHHHHHcCCCEE
Confidence 888743 233322 22 5555544443 135 56666543 3667788888865
No 367
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=39.04 E-value=30 Score=33.73 Aligned_cols=53 Identities=15% Similarity=0.080 Sum_probs=0.0
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC-------CCCCCCHHHHHHHHHHHHhcCC-CCEEE
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYY-------FQKKMTEDLIYEHFISVADNSP-IPVII 578 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY-------~kps~S~eeLv~YFraIAeAtd-LPIiL 578 (786)
+++|+...+..| ++.|.+.|+|++++.+-+. ..+. -.++++++.+..+ +||++
T Consensus 117 ~~~~~s~~t~~e----~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~-----~~~~l~~~~~~~~~~pvia 177 (227)
T 2tps_A 117 MILGVSAHTMSE----VKQAEEDGADYVGLGPIYPTETKKDTRAVQ-----GVSLIEAVRRQGISIPIVG 177 (227)
T ss_dssp SEEEEEECSHHH----HHHHHHHTCSEEEECCSSCCCSSSSCCCCC-----TTHHHHHHHHTTCCCCEEE
T ss_pred cEEEEecCCHHH----HHHHHhCCCCEEEECCCcCCCCCCCCCCcc-----CHHHHHHHHHhCCCCCEEE
No 368
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=38.96 E-value=1.1e+02 Score=33.18 Aligned_cols=125 Identities=9% Similarity=-0.041 Sum_probs=77.1
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCC-CC-CCCC-CCHHHHHHHHHHHHhcC--CCCEEEEeCCCCcC
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCP-YY-FQKK-MTEDLIYEHFISVADNS--PIPVIIYNNTFVTN 586 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPP-yY-~kps-~S~eeLv~YFraIAeAt--dLPIiLYNiP~~TG 586 (786)
+.++|+.+.++..+.++.++.++.+.+.|..++=+... .. .... .+.++-++.+++|-++. +++|++ |.- .
T Consensus 112 r~~v~~y~~~~~~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~v-DaN--~- 187 (405)
T 3rr1_A 112 RDKMRTYSWVGGDRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGL-DFH--G- 187 (405)
T ss_dssp CSCEEEEEECCCSSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEE-ECC--S-
T ss_pred cCceeeeEeCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEE-ECC--C-
Confidence 34689999888899999999999999999999977321 10 0000 01355678889998887 478876 432 2
Q ss_pred CccCHHHHHHHH----hCCCEEEEEeC----CHHHHHHHHhhcCCCCEEEEeCCcc----hhhhhhccCCc
Q psy11975 587 IDISVDTLVKLA----HHENIRGVKDT----DNIKLANMANQTKDLNFSVFAGSAG----YLLSGLLVGCA 645 (786)
Q Consensus 587 v~LSpelL~rLA----eiPNVVGIKDS----Dl~ri~~ll~~~~~~df~Vf~G~De----lLL~aL~~GAd 645 (786)
.++.+...+++ +. +|..|=+- |+..+.++.+ ..++.|..|..- .+...+..|+.
T Consensus 188 -~~~~~~A~~~~~~L~~~-~i~~iEeP~~~~d~~~~~~l~~---~~~iPIa~dE~i~~~~~~~~~l~~~a~ 253 (405)
T 3rr1_A 188 -RVSAPMAKVLIKELEPY-RPLFIEEPVLAEQAETYARLAA---HTHLPIAAGERMFSRFDFKRVLEAGGV 253 (405)
T ss_dssp -CBCHHHHHHHHHHHGGG-CCSCEECSSCCSSTHHHHHHHT---TCSSCEEECTTCCSHHHHHHHHHHCCC
T ss_pred -CCCHHHHHHHHHHHHhc-CCCEEECCCCcccHHHHHHHHh---cCCCCEEecCCcCCHHHHHHHHHHhCC
Confidence 34555544443 22 34445444 6666666654 235666666432 13344555543
No 369
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=38.82 E-value=54 Score=33.73 Aligned_cols=42 Identities=17% Similarity=0.295 Sum_probs=34.0
Q ss_pred HHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEE
Q psy11975 533 TQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIY 579 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLY 579 (786)
++.+.+.|+|++++--- .+.+.+.+.+..++|.+ .++|+++.
T Consensus 29 l~~~~~~GtDaI~vGgs----~gvt~~~~~~~v~~ik~-~~~Piil~ 70 (235)
T 3w01_A 29 LDAICMSQTDAIMIGGT----DDVTEDNVIHLMSKIRR-YPLPLVLE 70 (235)
T ss_dssp HHHHHTSSCSEEEECCS----SCCCHHHHHHHHHHHTT-SCSCEEEE
T ss_pred HHHHHHcCCCEEEECCc----CCcCHHHHHHHHHHhcC-cCCCEEEe
Confidence 33467899999999862 22469999999999988 99999984
No 370
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=38.77 E-value=94 Score=31.49 Aligned_cols=81 Identities=7% Similarity=0.046 Sum_probs=54.2
Q ss_pred eEEEeCCC-CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCC--ccCH
Q psy11975 516 DLLKPQKH-TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNI--DISV 591 (786)
Q Consensus 516 PVIaGVGa-~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv--~LSp 591 (786)
.|++-+.+ .+.++.++.++.+.+.|||+|=+--=++-..+ .+.+.+-...+-+.+ ++|+++=.-+..-|- .++.
T Consensus 5 ~Icvpi~~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~--~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~ 82 (238)
T 1sfl_A 5 EVVATITPQLSIEETLIQKINHRIDAIDVLELRIDQFENVT--VDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTN 82 (238)
T ss_dssp EEEEEECCCC---CHHHHHHHHTTTTCSEEEEECTTSTTCC--HHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCH
T ss_pred eEEEEecCCCCHHHHHHHHHHhhhcCCCEEEEEecccccCC--HHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCH
Confidence 46677888 89999999999999999999998887765543 777777777777766 799876654443332 4666
Q ss_pred HHHHHHH
Q psy11975 592 DTLVKLA 598 (786)
Q Consensus 592 elL~rLA 598 (786)
+...+|.
T Consensus 83 ~~~~~ll 89 (238)
T 1sfl_A 83 DSYLNLI 89 (238)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6554443
No 371
>1t3j_A Mitofusin 1; coiled coil antiparallel, dimer, membrane protein; 2.50A {Mus musculus} SCOP: h.4.16.1
Probab=38.71 E-value=4.2 Score=36.73 Aligned_cols=23 Identities=26% Similarity=0.439 Sum_probs=10.6
Q ss_pred cCCCCCccccccccccccccccc
Q psy11975 225 HHSKPLSRTMFGPVSRLCLKVTS 247 (786)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~ 247 (786)
+-|--+.|-|=+-..|||..|.-
T Consensus 25 ncshQVQqELs~tfarLc~~Vd~ 47 (96)
T 1t3j_A 25 NCSHQVQQEMATTFARLCQQVDM 47 (96)
T ss_dssp ----------CCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHH
Confidence 33445667777888999988864
No 372
>1ydx_A Type I restriction enzyme specificity protein Mg4; type-I HSDS, DNA binding protein; 2.30A {Mycoplasma genitalium} SCOP: d.287.1.2 d.287.1.2
Probab=38.64 E-value=6.5 Score=41.69 Aligned_cols=11 Identities=0% Similarity=-0.348 Sum_probs=8.8
Q ss_pred CCCCceEEEec
Q psy11975 357 LAEGDLVWGSV 367 (786)
Q Consensus 357 f~vGDLVWaKv 367 (786)
+..||++.++.
T Consensus 82 ~~~gdili~~~ 92 (406)
T 1ydx_A 82 TFKNTISVIVG 92 (406)
T ss_dssp BCSSCEEEECB
T ss_pred cCCCCEEEEec
Confidence 67799999874
No 373
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=38.61 E-value=56 Score=32.06 Aligned_cols=61 Identities=11% Similarity=0.057 Sum_probs=42.7
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..+++.....+.....+..+.+.+.++|++++.+... +.+...++.+. ..++|+++++.+.
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiI~~~~~~-------~~~~~~~~~~~-~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 39 YEALVATSQNSRISEREQILEFVHLKVDAIFITTLDD-------VYIGSAIEEAK-KAGIPVFAIDRMI 99 (293)
T ss_dssp CEEEEEECSSCHHHHHHHHHHHHHTTCSEEEEECSCT-------TTTHHHHHHHH-HTTCCEEEESSCC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCh-------HHHHHHHHHHH-HcCCCEEEecCCC
Confidence 4455555567788888899999999999999986431 11224444443 4589999998754
No 374
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=38.47 E-value=25 Score=36.03 Aligned_cols=69 Identities=12% Similarity=-0.028 Sum_probs=40.6
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHH---HHHHHHHHHHhc--CCCCEEEEeCCCCcCCccCH
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTED---LIYEHFISVADN--SPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~e---eLv~YFraIAeA--tdLPIiLYNiP~~TGv~LSp 591 (786)
.++|++..+.+| ++.|.+.|||.|.+.|-| ...+ .++ .-.+.++.+++. .++|++.- .|+ ++
T Consensus 136 ~~iG~S~ht~~E----a~~A~~~GaDyI~vgpvf-~T~t-K~~~~~~gl~~l~~~~~~~~~~iPvvAi-----GGI--~~ 202 (243)
T 3o63_A 136 TLIGRSTHDPDQ----VAAAAAGDADYFCVGPCW-PTPT-KPGRAAPGLGLVRVAAELGGDDKPWFAI-----GGI--NA 202 (243)
T ss_dssp CEEEEEECSHHH----HHHHHHSSCSEEEECCSS-CCCC------CCCHHHHHHHHTC---CCCEEEE-----SSC--CT
T ss_pred CEEEEeCCCHHH----HHHHhhCCCCEEEEcCcc-CCCC-CCCcchhhHHHHHHHHHhccCCCCEEEe-----cCC--CH
Confidence 466777777665 455777999999987633 2221 011 125677777776 46777653 343 55
Q ss_pred HHHHHHH
Q psy11975 592 DTLVKLA 598 (786)
Q Consensus 592 elL~rLA 598 (786)
+.+.++.
T Consensus 203 ~ni~~~~ 209 (243)
T 3o63_A 203 QRLPAVL 209 (243)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 5566554
No 375
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=38.37 E-value=77 Score=32.72 Aligned_cols=74 Identities=9% Similarity=-0.029 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCC--CCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhC-
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQ--KKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHH- 600 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~k--ps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAei- 600 (786)
.++++.+++++.+.++|++.|-+..|...+ |. -++..+.++.+++..++++.+.- | ..+.+.+..+.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~~~~e~~~~i~~~~~~~v~~l~-~-------n~~~i~~a~~~G 92 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQ--LADSREVMAGIRRADGVRYSVLV-P-------NMKGYEAAAAAH 92 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCCSSSEEEEEC-S-------SHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCcccccc--ccCHHHHHHHHHhCCCCEEEEEe-C-------CHHHHHHHHHCC
Confidence 789999999999999999999998654322 21 11344666777665467775442 2 25667776643
Q ss_pred CCEEEEE
Q psy11975 601 ENIRGVK 607 (786)
Q Consensus 601 PNVVGIK 607 (786)
-..+.|=
T Consensus 93 ~~~V~i~ 99 (295)
T 1ydn_A 93 ADEIAVF 99 (295)
T ss_dssp CSEEEEE
T ss_pred CCEEEEE
Confidence 2344554
No 376
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=38.34 E-value=36 Score=32.31 Aligned_cols=49 Identities=16% Similarity=0.158 Sum_probs=37.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFIS 567 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFra 567 (786)
++|||+.-+..+.++..+.. ++|||++++..-+|.++- +.+++.+++++
T Consensus 174 ~~Pvia~~g~~~~~~~~~~~----~~G~~~~~vg~a~~~~~~-~~~~~~~~l~~ 222 (237)
T 3cwo_X 174 TLPIIASGGAGKMEHFLEAF----LAGADAALAASVFHFREI-DVRELKEYLKK 222 (237)
T ss_dssp CSCEEEESCCCSHHHHHHHH----HHTCSEEEESHHHHTTSS-CHHHHHHHHHT
T ss_pred CCCEEecCCCCCHHHHHHHH----HcCcHHHhhhHHHHcCCC-CHHHHHHHHHH
Confidence 67999987777777766654 469999999998877763 68888777653
No 377
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=38.25 E-value=55 Score=35.26 Aligned_cols=104 Identities=9% Similarity=-0.008 Sum_probs=70.0
Q ss_pred CCCeEEEeC-CCC--CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHh-cCCCCEEEEeCCCCcCCc
Q psy11975 513 WQADLLKPQ-KHT--TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVAD-NSPIPVIIYNNTFVTNID 588 (786)
Q Consensus 513 GRVPVIaGV-Ga~--ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAe-AtdLPIiLYNiP~~TGv~ 588 (786)
.++++.+=+ ++. +.++++++++..++.|++.+ --|+ .+. -++.+++|.+ ++++||+.=. ..
T Consensus 192 ~d~~l~vDan~~~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~~iPI~~dE------~~ 256 (401)
T 2hzg_A 192 PDGDLMVDVGQIFGEDVEAAAARLPTLDAAGVLWL--EEPF--DAG-----ALAAHAALAGRGARVRIAGGE------AA 256 (401)
T ss_dssp SSSEEEEECTTTTTTCHHHHHTTHHHHHHTTCSEE--ECCS--CTT-----CHHHHHHHHTTCCSSEEEECT------TC
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Ccc-----CHHHHHHHHhhCCCCCEEecC------Cc
Confidence 356666633 345 78999999999999999854 4553 221 2567788888 8899987643 33
Q ss_pred cCHHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 589 ISVDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 589 LSpelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+++.+.++.+ .-+++-+|-. .+....++.+....-++.++.+
T Consensus 257 ~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~h 304 (401)
T 2hzg_A 257 HNFHMAQHLMDYGRIGFIQIDCGRIGGLGPAKRVADAAQARGITYVNH 304 (401)
T ss_dssp SSHHHHHHHHHHSCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred CCHHHHHHHHHCCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEecC
Confidence 56788888873 5789999988 6655544433212234666666
No 378
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=38.15 E-value=21 Score=33.35 Aligned_cols=10 Identities=30% Similarity=0.448 Sum_probs=5.4
Q ss_pred CcEEEEEeCC
Q psy11975 385 GRVWVKWFGM 394 (786)
Q Consensus 385 g~~~V~fFG~ 394 (786)
|++.-.|.|.
T Consensus 143 G~i~~~~~g~ 152 (176)
T 3kh7_A 143 GIIRHKIVGV 152 (176)
T ss_dssp CBEEEEEESC
T ss_pred CeEEEEEcCC
Confidence 5555455564
No 379
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=37.92 E-value=1e+02 Score=30.51 Aligned_cols=125 Identities=18% Similarity=0.035 Sum_probs=68.8
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHH
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTL 594 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL 594 (786)
.++.+++--++. .+.++.+.++|||+|.+..-. . ++.+.+..+.+.+ .++.+++==.|.. +.+.+
T Consensus 65 ~~~~v~lmv~d~---~~~i~~~~~agad~v~vH~~~----~--~~~~~~~~~~i~~-~g~~igv~~~p~t-----~~e~~ 129 (228)
T 1h1y_A 65 AYLDCHLMVTNP---SDYVEPLAKAGASGFTFHIEV----S--RDNWQELIQSIKA-KGMRPGVSLRPGT-----PVEEV 129 (228)
T ss_dssp SEEEEEEESSCG---GGGHHHHHHHTCSEEEEEGGG----C--TTTHHHHHHHHHH-TTCEEEEEECTTS-----CGGGG
T ss_pred CcEEEEEEecCH---HHHHHHHHHcCCCEEEECCCC----c--ccHHHHHHHHHHH-cCCCEEEEEeCCC-----CHHHH
Confidence 355555555554 345666777899999876321 1 1112455555543 4666664444531 23445
Q ss_pred HHHHh---CCCEEEE----------EeC--CHHHHHHHHhhcCCCCEEEEeCCcc-hhhhhhccCCcccccccccc
Q psy11975 595 VKLAH---HENIRGV----------KDT--DNIKLANMANQTKDLNFSVFAGSAG-YLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 595 ~rLAe---iPNVVGI----------KDS--Dl~ri~~ll~~~~~~df~Vf~G~De-lLL~aL~~GAdG~Isg~aN~ 654 (786)
..+.+ ....+++ |.. .+.++.++.+....-.+.+-.|-.. .+...+..|+++++.|.+-+
T Consensus 130 ~~~~~~~~~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~ni~~~~~aGaD~vvvGsai~ 205 (228)
T 1h1y_A 130 FPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIF 205 (228)
T ss_dssp HHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHHH
T ss_pred HHHHhcCCCCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHHHHHHHHHcCCCEEEECHHHH
Confidence 55554 4455555 222 3566666655221223445556543 45566778999999997643
No 380
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=37.82 E-value=52 Score=35.15 Aligned_cols=36 Identities=14% Similarity=0.126 Sum_probs=27.1
Q ss_pred CCeEEE----eCCCC-CHHHHHHHHHHHHHcCCCEEEEcCC
Q psy11975 514 QADLLK----PQKHT-TTRATIDLTQKAAKAGANAALILCP 549 (786)
Q Consensus 514 RVPVIa----GVGa~-ST~EAIELAr~Ae~aGADAVmViPP 549 (786)
.+||++ |.... +.++++++++.++++|+|++.+..-
T Consensus 126 ~~PV~vKiR~g~~~~~~~~~~~~~a~~l~~aG~d~I~V~~r 166 (350)
T 3b0p_A 126 RVPVTVKMRLGLEGKETYRGLAQSVEAMAEAGVKVFVVHAR 166 (350)
T ss_dssp SSCEEEEEESCBTTCCCHHHHHHHHHHHHHTTCCEEEEECS
T ss_pred CCceEEEEecCcCccccHHHHHHHHHHHHHcCCCEEEEecC
Confidence 367777 33322 3468999999999999999998753
No 381
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=37.62 E-value=91 Score=33.23 Aligned_cols=99 Identities=8% Similarity=0.035 Sum_probs=66.6
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+-+ ++.+.++++++++..+ .|+ .+--|+. . ++.+++|.+++++||+.=. .-.+++
T Consensus 190 ~~~l~vDan~~~~~~~a~~~~~~l~-~~i---~iEqP~~---d------~~~~~~l~~~~~iPI~~dE------~~~~~~ 250 (378)
T 2qdd_A 190 GHRVTFDVNRAWTPAIAVEVLNSVR-ARD---WIEQPCQ---T------LDQCAHVARRVANPIMLDE------CLHEFS 250 (378)
T ss_dssp TCEEEEECTTCCCHHHHHHHHTSCC-CCC---EEECCSS---S------HHHHHHHHTTCCSCEEECT------TCCSHH
T ss_pred CCEEEEeCCCCCCHHHHHHHHHHhC-CCc---EEEcCCC---C------HHHHHHHHHhCCCCEEECC------CcCCHH
Confidence 45555533 4568899999999987 776 4555642 3 5677888888899998743 234678
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+.++.+ .-+++-+|-. .+....++.+....-++.++.+
T Consensus 251 ~~~~~i~~~~~d~v~ik~~~~GGi~~~~~i~~~A~~~g~~~~~~ 294 (378)
T 2qdd_A 251 DHLAAWSRGACEGVKIKPNRVGGLTRARQIRDFGVSVGWQMHIE 294 (378)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEEec
Confidence 8888873 5789999998 6655555443222235666666
No 382
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=37.58 E-value=21 Score=38.78 Aligned_cols=78 Identities=8% Similarity=-0.086 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC--CE
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE--NI 603 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP--NV 603 (786)
.++++++++.++++|+|.+-+..+.. + . .+.+.|.+++++||+.= |. ++++...++.+.. .+
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~~---~--~----~~~~~ik~~~~iPvi~~------Gg-it~e~a~~~l~~g~aD~ 304 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSREREA---D--D----SIGPLIKEAFGGPYIVN------ER-FDKASANAALASGKADA 304 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCC---T--T----CCHHHHHHHHCSCEEEE------SS-CCHHHHHHHHHTTSCSE
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCC---C--H----HHHHHHHHHCCCCEEEe------CC-CCHHHHHHHHHcCCccE
Confidence 67899999999999999999987651 1 1 34566666678898753 22 3899988888644 34
Q ss_pred EEEEeC---CHHHHHHHHh
Q psy11975 604 RGVKDT---DNIKLANMAN 619 (786)
Q Consensus 604 VGIKDS---Dl~ri~~ll~ 619 (786)
|++=-. |++-..++.+
T Consensus 305 V~iGR~~lanPdl~~k~~~ 323 (362)
T 4ab4_A 305 VAFGVPFIANPDLPARLAA 323 (362)
T ss_dssp EEESHHHHHCTTHHHHHHT
T ss_pred EEECHHhHhCcHHHHHHHc
Confidence 554333 6665666654
No 383
>2d2a_A SUFA protein; iron-sulfur cluster, iron, ISCA, YADR, metal transport; 2.70A {Escherichia coli}
Probab=37.57 E-value=6.9 Score=37.39 Aligned_cols=23 Identities=17% Similarity=0.089 Sum_probs=12.8
Q ss_pred ccccccccccccccccceecCCC
Q psy11975 311 DEEIDFEKFKFNVSKWEKVPLKG 333 (786)
Q Consensus 311 ~~~~~~e~~k~~vs~~e~~~l~~ 333 (786)
|.....+-+++.|.+....-|+.
T Consensus 90 D~v~e~~Gv~v~VD~~s~~~L~G 112 (145)
T 2d2a_A 90 DLLFEHDGAKLFVPLQAMPFIDG 112 (145)
T ss_dssp EEEEEETTEEEEEEGGGHHHHTT
T ss_pred CeEEEECCEEEEEeHHHHHhhCC
Confidence 34444556777666655554443
No 384
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=37.50 E-value=7 Score=41.31 Aligned_cols=7 Identities=43% Similarity=0.762 Sum_probs=0.0
Q ss_pred cccccCC
Q psy11975 221 QSKHHHS 227 (786)
Q Consensus 221 ~~~~~~~ 227 (786)
.-||||-
T Consensus 9 ~~~~~~~ 15 (314)
T 3fwy_A 9 GMHHHHH 15 (314)
T ss_dssp -------
T ss_pred ccccccc
Confidence 3455553
No 385
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=37.49 E-value=37 Score=36.77 Aligned_cols=28 Identities=18% Similarity=0.201 Sum_probs=21.1
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALI 546 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmV 546 (786)
++||+++... + .+.|+.|+++|||+|.+
T Consensus 194 ~~pviv~~v~-~----~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 194 NLDLIAGNIV-T----KEAALDLISVGADCLKV 221 (404)
T ss_dssp TCEEEEEEEC-S----HHHHHHHHTTTCSEEEE
T ss_pred CCeEEEcCCC-c----HHHHHHHHhcCCCEEEE
Confidence 5789973222 2 46788889999999999
No 386
>2l72_A Tgadf, actin depolymerizing factor, putative; ADF/cofilin, actin binding, protein binding; NMR {Toxoplasma gondii}
Probab=37.42 E-value=7 Score=36.87 Aligned_cols=11 Identities=18% Similarity=0.292 Sum_probs=9.0
Q ss_pred CcEEEEEeCCC
Q psy11975 385 GRVWVKWFGMS 395 (786)
Q Consensus 385 g~~~V~fFG~~ 395 (786)
+.+.|.|-+++
T Consensus 89 k~vFI~w~Pd~ 99 (139)
T 2l72_A 89 KIQFVLWCPDN 99 (139)
T ss_dssp CEEEEEECCTT
T ss_pred cEEEEEECCCC
Confidence 56789999986
No 387
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=37.39 E-value=49 Score=35.60 Aligned_cols=29 Identities=17% Similarity=0.160 Sum_probs=22.1
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAKAGANAALILC 548 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmViP 548 (786)
++||++ ++ .+ .+.++.|.++|||+|.+..
T Consensus 225 ~~pv~vK~~--~~----~e~a~~a~~~Gad~I~vs~ 254 (370)
T 1gox_A 225 SLPILVKGV--IT----AEDARLAVQHGAAGIIVSN 254 (370)
T ss_dssp CSCEEEECC--CS----HHHHHHHHHTTCSEEEECC
T ss_pred CCCEEEEec--CC----HHHHHHHHHcCCCEEEECC
Confidence 478988 44 22 3667899999999999954
No 388
>3uau_A JLPA, surface-exposed lipoprotein; adhesin, bacterial cell surface, cell adhesion; 2.70A {Campylobacter jejuni subsp}
Probab=37.31 E-value=7.1 Score=41.26 Aligned_cols=8 Identities=25% Similarity=0.397 Sum_probs=4.3
Q ss_pred CCCCCceE
Q psy11975 356 GLAEGDLV 363 (786)
Q Consensus 356 ~f~vGDLV 363 (786)
.|..||-|
T Consensus 141 ~fkLge~v 148 (379)
T 3uau_A 141 DFKLGEKV 148 (379)
T ss_dssp EEEECHHH
T ss_pred ccccchHH
Confidence 45566544
No 389
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=37.29 E-value=31 Score=36.85 Aligned_cols=75 Identities=13% Similarity=0.051 Sum_probs=47.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCC------CCCCCC--H--HHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYY------FQKKMT--E--DLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY------~kps~S--~--eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
.++|++.+. + ++.++.++++|+|+|.+..|-+ +.+... . ....+.+++|.+..++||+.=
T Consensus 145 g~~v~~~v~--t----~~~a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~~iPViaa---- 214 (369)
T 3bw2_A 145 GTLTLVTAT--T----PEEARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAVDIPVVAA---- 214 (369)
T ss_dssp TCEEEEEES--S----HHHHHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHCSSCEEEE----
T ss_pred CCeEEEECC--C----HHHHHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhcCceEEEE----
Confidence 357777764 2 3457788999999999966532 101000 0 124677888888888998753
Q ss_pred CcCCccCHHHHHHHHhC
Q psy11975 584 VTNIDISVDTLVKLAHH 600 (786)
Q Consensus 584 ~TGv~LSpelL~rLAei 600 (786)
|---+++.+.++.+.
T Consensus 215 --GGI~~~~~~~~~l~~ 229 (369)
T 3bw2_A 215 --GGIMRGGQIAAVLAA 229 (369)
T ss_dssp --SSCCSHHHHHHHHHT
T ss_pred --CCCCCHHHHHHHHHc
Confidence 322378888777754
No 390
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=37.29 E-value=64 Score=31.93 Aligned_cols=61 Identities=8% Similarity=0.125 Sum_probs=43.0
Q ss_pred CeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 515 ADLLK-PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 515 VPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..+++ .....+.+...+..+.+.+.++||+++.+.... .+...++.+. ..++|+++++.+.
T Consensus 35 ~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-------~~~~~~~~~~-~~~iPvV~~~~~~ 96 (305)
T 3g1w_A 35 VTVEYRGAAQYDIQEQITVLEQAIAKNPAGIAISAIDPV-------ELTDTINKAV-DAGIPIVLFDSGA 96 (305)
T ss_dssp CEEEEEECSSSCHHHHHHHHHHHHHHCCSEEEECCSSTT-------TTHHHHHHHH-HTTCCEEEESSCC
T ss_pred CEEEEeCCCcCCHHHHHHHHHHHHHhCCCEEEEcCCCHH-------HHHHHHHHHH-HCCCcEEEECCCC
Confidence 34555 667778888899999999999999999864321 1223444443 4689999999753
No 391
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=37.19 E-value=36 Score=34.06 Aligned_cols=74 Identities=18% Similarity=0.165 Sum_probs=47.3
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCCCCHHHHHHHHHHHHh---cCCCCEEEEeCCCCcCCccCHHHHHHH
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYF-QKKMTEDLIYEHFISVAD---NSPIPVIIYNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps~S~eeLv~YFraIAe---AtdLPIiLYNiP~~TGv~LSpelL~rL 597 (786)
|..+.+++.++++.|.+.|.+.+.+++-... .+..+.+.+..||+.+-+ ....+|-|+ ++ .-+.+.+..+..|
T Consensus 19 g~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~--~G-~E~~~~~~~~~~l 95 (247)
T 2wje_A 19 GPKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIA--YG-AEIYYTPDVLDKL 95 (247)
T ss_dssp SCSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEE--CC-CEEECCTHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEE--Ee-eEEeecHHHHHHH
Confidence 4567889999999999999999998874321 111247888899988865 223455444 11 1123344555555
Q ss_pred H
Q psy11975 598 A 598 (786)
Q Consensus 598 A 598 (786)
.
T Consensus 96 ~ 96 (247)
T 2wje_A 96 E 96 (247)
T ss_dssp H
T ss_pred h
Confidence 4
No 392
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=37.12 E-value=1.2e+02 Score=29.63 Aligned_cols=132 Identities=14% Similarity=-0.005 Sum_probs=67.0
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEE----EeCCCCcC-
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVII----YNNTFVTN- 586 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiL----YNiP~~TG- 586 (786)
.+||+++-+-.+.++ ++.+.++|||+|++..-... +++.+.+..+.+-+.. .+.+-+ +..--+..
T Consensus 74 ~ipv~v~ggi~~~~~----~~~~l~~Gad~V~lg~~~l~----~p~~~~~~~~~~g~~~~~~ld~~~~~~~~~v~~~g~~ 145 (244)
T 2y88_A 74 DVQVELSGGIRDDES----LAAALATGCARVNVGTAALE----NPQWCARVIGEHGDQVAVGLDVQIIDGEHRLRGRGWE 145 (244)
T ss_dssp SSEEEEESSCCSHHH----HHHHHHTTCSEEEECHHHHH----CHHHHHHHHHHHGGGEEEEEEEEEETTEEEEEEGGGT
T ss_pred CCcEEEECCCCCHHH----HHHHHHcCCCEEEECchHhh----ChHHHHHHHHHcCCCEEEEEeccccCCCCEEEECCcc
Confidence 479999766665543 66666789999998754321 1344444444443222 122110 00000000
Q ss_pred --CccCHHHHHHHHhC--CCEEEEE---e----C-CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhcc---CCccccc
Q psy11975 587 --IDISVDTLVKLAHH--ENIRGVK---D----T-DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLV---GCAGGIN 649 (786)
Q Consensus 587 --v~LSpelL~rLAei--PNVVGIK---D----S-Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~---GAdG~Is 649 (786)
..-..+.+.++.+. ..|.-.- + . |++.+.++.+. ..-.+-.-.|-. +.+...+.. |++|++.
T Consensus 146 ~~~~~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~l~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 146 TDGGDLWDVLERLDSEGCSRFVVTDITKDGTLGGPNLDLLAGVADR-TDAPVIASGGVSSLDDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp EEEEEHHHHHHHHHHTTCCCEEEEETTTTTTTSCCCHHHHHHHHTT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCCCCHHHHHHHHHhCCCCEEEEEecCCccccCCCCHHHHHHHHHh-CCCCEEEECCCCCHHHHHHHHhhccCCCCEEEE
Confidence 01124555555543 3343221 1 1 67777777652 222232223333 345666677 9999999
Q ss_pred ccccc
Q psy11975 650 ALSAV 654 (786)
Q Consensus 650 g~aN~ 654 (786)
|.+-+
T Consensus 225 G~al~ 229 (244)
T 2y88_A 225 GKALY 229 (244)
T ss_dssp CHHHH
T ss_pred cHHHH
Confidence 97654
No 393
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Probab=37.12 E-value=7.1 Score=40.14 Aligned_cols=12 Identities=33% Similarity=0.332 Sum_probs=8.6
Q ss_pred CCcEEEEEeCCC
Q psy11975 384 QGRVWVKWFGMS 395 (786)
Q Consensus 384 ~g~~~V~fFG~~ 395 (786)
.|.+.|+|.=+.
T Consensus 163 eG~V~V~f~Id~ 174 (229)
T 2grx_C 163 EGQVKVKFDVTP 174 (229)
T ss_dssp CEEECEEEECCT
T ss_pred eEEEEEEEEECC
Confidence 477888887664
No 394
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=36.91 E-value=16 Score=32.72 Aligned_cols=55 Identities=5% Similarity=0.076 Sum_probs=42.5
Q ss_pred cCCCCCCCceEEEecccCCCCCccccCCCCC--CCcEEEEEeCCCCCccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVKGYPSWPGKLISPAPT--QGRVWVKWFGMSNEPLSEVEPATLK 408 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~--~g~~~V~fFG~~~~a~s~V~~k~Lk 408 (786)
....|.+|+.||++- +=-|-+|+|++.... ...|.|.|-|-+.+---||..++|.
T Consensus 22 ~~~~~~vG~kv~v~~-~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~ 78 (94)
T 2rnz_A 22 SVDDIIIKCQCWVQK-NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRIN 78 (94)
T ss_dssp CGGGCCTTEEEEEEC-SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBC
T ss_pred ccccccCCCEEEEEE-CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHcc
Confidence 334699999999995 557889999985432 3479999999997655668888874
No 395
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=36.80 E-value=27 Score=33.31 Aligned_cols=85 Identities=12% Similarity=0.031 Sum_probs=49.3
Q ss_pred HHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-h-CCCEEEEEeC---CH---HHHHHHHhhcCCCCEEEEeCCc
Q psy11975 562 YEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-H-HENIRGVKDT---DN---IKLANMANQTKDLNFSVFAGSA 633 (786)
Q Consensus 562 v~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-e-iPNVVGIKDS---Dl---~ri~~ll~~~~~~df~Vf~G~D 633 (786)
..++..+.+..+.-+++ .|.+++++.+.+.+ + -|.++|+=-. .+ .++.+.+++...+++.|+.|.-
T Consensus 35 ~~~va~~l~~~G~eVi~------lG~~~p~e~lv~aa~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 35 AKVVARALRDAGFEVVY------TGLRQTPEQVAMAAVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHHHHTTCEEEC------CCSBCCHHHHHHHHHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHHHHCCCEEEE------CCCCCCHHHHHHHHHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 34555556665655552 35668888888887 3 5899999776 23 3333344422223577777653
Q ss_pred ch---hhhhhccCCcccccccc
Q psy11975 634 GY---LLSGLLVGCAGGINALS 652 (786)
Q Consensus 634 el---LL~aL~~GAdG~Isg~a 652 (786)
.. .......|+++++..-+
T Consensus 109 ~~~~~~~~l~~~G~d~v~~~~~ 130 (161)
T 2yxb_A 109 IPIPDLEPLRSLGIREIFLPGT 130 (161)
T ss_dssp CCHHHHHHHHHTTCCEEECTTC
T ss_pred CchhcHHHHHHCCCcEEECCCC
Confidence 21 11133689998665443
No 396
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=36.73 E-value=7.3 Score=45.60 Aligned_cols=20 Identities=25% Similarity=0.419 Sum_probs=15.4
Q ss_pred cCCCCCCCHHHHHHHHHhCC
Q psy11975 461 AHSSTSMPIQKRKSLLRKFP 480 (786)
Q Consensus 461 agE~~sLT~dER~~Lle~~~ 480 (786)
.|-..+|..++++++++.++
T Consensus 332 ~G~st~lp~~~q~~~~~~ip 351 (651)
T 3ces_A 332 NGISTSLPFDVQMQIVRSMQ 351 (651)
T ss_dssp ETCCCCSCHHHHHHHHHTST
T ss_pred cCCCCCCCHHHHHHHHhhCC
Confidence 44458999999999999743
No 397
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=36.58 E-value=62 Score=35.44 Aligned_cols=91 Identities=12% Similarity=0.085 Sum_probs=63.4
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSP-IPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtd-LPIiLYNiP~~TGv~LSp 591 (786)
.+++.+-+ ++.+.++++++++..++.|++.+ --|. .+. -++.+++|.++++ +||+.=. ...++
T Consensus 229 d~~l~vDan~~~~~~eai~~~~~L~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~~iPIa~dE------~~~~~ 293 (428)
T 3bjs_A 229 EVDILTDANTAYTMADARRVLPVLAEIQAGWL--EEPF--ACN-----DFASYREVAKITPLVPIAAGE------NHYTR 293 (428)
T ss_dssp TSEEEEECTTCCCHHHHHHHHHHHHHTTCSCE--ECCS--CTT-----CHHHHHHHTTTCSSSCEEECT------TCCSH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCC--Ccc-----CHHHHHHHHHhCCCCcEEcCC------CcCCH
Confidence 45565532 45689999999999999998843 3443 221 2677888988888 9988644 23568
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHHh
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll~ 619 (786)
+.+.++.+ .-+++-+|-. .+....++.+
T Consensus 294 ~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia~ 326 (428)
T 3bjs_A 294 FEFGQMLDAGAVQVWQPDLSKCGGITEGIRIAA 326 (428)
T ss_dssp HHHHHHHTTCCEEEECCBTTTSSCHHHHHHHHH
T ss_pred HHHHHHHHhCCCCEEEeCccccCCHHHHHHHHH
Confidence 88888884 3578888988 5655554443
No 398
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=36.46 E-value=1.1e+02 Score=32.28 Aligned_cols=28 Identities=7% Similarity=-0.062 Sum_probs=19.6
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEE
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAAL 545 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVm 545 (786)
.+||++...-.. ++.++.++++|||+|-
T Consensus 78 ~iPvl~k~~i~~----ide~qil~aaGAD~Id 105 (297)
T 4adt_A 78 SINVLAKVRIGH----FVEAQILEELKVDMLD 105 (297)
T ss_dssp CSEEEEEEETTC----HHHHHHHHHTTCSEEE
T ss_pred CCCEEEeccCCc----HHHHHHHHHcCCCEEE
Confidence 479997532222 6677777789999993
No 399
>4faj_A PRGZ; substrate binding protein, peptide binding protein, pheromon extracellular, membrane anchored; 1.90A {Enterococcus faecalis}
Probab=36.35 E-value=7.5 Score=41.38 Aligned_cols=10 Identities=70% Similarity=1.404 Sum_probs=0.0
Q ss_pred CCCCCCCCCC
Q psy11975 204 HHHSHHHRSH 213 (786)
Q Consensus 204 ~~~~~~~~~~ 213 (786)
|||+|||++|
T Consensus 2 hhhhhhhhhh 11 (564)
T 4faj_A 2 HHHHHHHHHH 11 (564)
T ss_dssp ----------
T ss_pred Cccccccccc
No 400
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=36.34 E-value=2.7e+02 Score=28.96 Aligned_cols=94 Identities=6% Similarity=0.038 Sum_probs=61.1
Q ss_pred CCeEEEeCC-CCCHHHHHHHHHHHHHcCCCE---EEEcCCCCCC-CC--------CCHHHHHHHHHHHHhcCCCCEEE--
Q psy11975 514 QADLLKPQK-HTTTRATIDLTQKAAKAGANA---ALILCPYYFQ-KK--------MTEDLIYEHFISVADNSPIPVII-- 578 (786)
Q Consensus 514 RVPVIaGVG-a~ST~EAIELAr~Ae~aGADA---VmViPPyY~k-ps--------~S~eeLv~YFraIAeAtdLPIiL-- 578 (786)
|+-||+|=. -.+.+.+++.|++.+++|++. -.+.=-||.| |. +.-++=++.++++++..++|++-
T Consensus 3 ~l~viaGPCsie~~~~~~~~A~~l~~~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~l~~~~~e~Glp~~te~ 82 (267)
T 2nwr_A 3 KFLVIAGPNAIESEELLLKVGEEIKRLSEKFKEVEFVFKSSFDKANRSSIHSFRGHGLEYGVKALRKVKEEFGLKITTDI 82 (267)
T ss_dssp CEEEEEECSBCSCHHHHHHHHHHHHHHHHHCTTEEEEEECBSCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCEEEEEC
T ss_pred CcEEEEcCCCcCCHHHHHHHHHHHHHHHHhhcCccEEEeeccccCCCCCCCCCcCccHHHHHHHHHHHHHhcCCeEEEec
Confidence 455777644 468889999999998875432 2233323333 21 12344456678888888998875
Q ss_pred ---------------EeCCCCcCCccCHHHHHHHHhCCCEEEEEeC
Q psy11975 579 ---------------YNNTFVTNIDISVDTLVKLAHHENIRGVKDT 609 (786)
Q Consensus 579 ---------------YNiP~~TGv~LSpelL~rLAeiPNVVGIKDS 609 (786)
|-+|++. .-..+++.++++...-+++|-.
T Consensus 83 ~d~~~~~~l~~~vd~~~IgA~~--~rn~~ll~~~a~~~~PV~lK~G 126 (267)
T 2nwr_A 83 HESWQAEPVAEVADIIQIPAFL--CRQTDLLLAAAKTGRAVNVKKG 126 (267)
T ss_dssp SSGGGHHHHHTTCSEEEECGGG--TTCHHHHHHHHTTTSEEEEECC
T ss_pred CCHHhHHHHHhcCCEEEECccc--ccCHHHHHHHHcCCCcEEEeCC
Confidence 4444322 2335688888888999999988
No 401
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=36.33 E-value=2.6e+02 Score=28.94 Aligned_cols=131 Identities=11% Similarity=0.064 Sum_probs=81.9
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHhcCCCC-----EEEEeCCCC--cCCccCHHH
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYF--QKKMTEDLIYEHFISVADNSPIP-----VIIYNNTFV--TNIDISVDT 593 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~--kps~S~eeLv~YFraIAeAtdLP-----IiLYNiP~~--TGv~LSpel 593 (786)
+.+-+...+.++.|.+.|..-|+++--..- ..+.+.+.+.+-.+.+.+..+.. ++.|.=+.. ||..-+++.
T Consensus 106 ~Etd~~V~~Kv~~Al~~GL~pIlCvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~At~e~ 185 (254)
T 3m9y_A 106 HETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSED 185 (254)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHTTCCHHHHHHCEEEECCGGGCC--CCCCHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHHCCCHHHHHHHHHHHHHhcCCHHHhCCEEEEECChhhhcCCCCCCHHH
Confidence 445566667799999999999999864321 01112344444555554433322 888985433 788888888
Q ss_pred HHHHHhCCCEEEEEeCCHHHHHHHHhhc----CCCCEEEEeCCcc---hhhhhh-ccCCccccccccccccHHHHHHHHH
Q psy11975 594 LVKLAHHENIRGVKDTDNIKLANMANQT----KDLNFSVFAGSAG---YLLSGL-LVGCAGGINALSAVLGGPICELYDL 665 (786)
Q Consensus 594 L~rLAeiPNVVGIKDSDl~ri~~ll~~~----~~~df~Vf~G~De---lLL~aL-~~GAdG~Isg~aN~~Pel~vaL~eA 665 (786)
..+.. ..+++.+... ...+++|+.|..- ...+.+ ..+.||++-|.+.+-|+-+.+|+++
T Consensus 186 aqevh-------------~~IR~~l~~~~~~~~a~~~rIlYGGSV~~~N~~~l~~~~diDG~LVGgASL~~~~F~~Ii~~ 252 (254)
T 3m9y_A 186 ANEMC-------------AFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEG 252 (254)
T ss_dssp HHHHH-------------HHHHHHHHHHSCHHHHTTSEEEECSCCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHHHH
T ss_pred HHHHH-------------HHHHHHHHHhcChhhcCCccEEEcCCcCHHHHHHHHcCCCCCeEEeeHHhhCHHHHHHHHHh
Confidence 88874 2334333311 1246787777642 234444 5789999999999999999999876
Q ss_pred H
Q psy11975 666 A 666 (786)
Q Consensus 666 ~ 666 (786)
+
T Consensus 253 ~ 253 (254)
T 3m9y_A 253 A 253 (254)
T ss_dssp H
T ss_pred c
Confidence 4
No 402
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=36.13 E-value=76 Score=34.25 Aligned_cols=104 Identities=9% Similarity=-0.028 Sum_probs=68.5
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
++++.+-+ ++.+.++++++++..++.|++.+ --|. .+. -++.+++|.+.+++||+.=.. ..+++
T Consensus 220 d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~iPIa~dE~------~~~~~ 284 (398)
T 2pp0_A 220 EFPLMVDANQQWDRETAIRMGRKMEQFNLIWI--EEPL--DAY-----DIEGHAQLAAALDTPIATGEM------LTSFR 284 (398)
T ss_dssp SSCEEEECTTCSCHHHHHHHHHHHGGGTCSCE--ECCS--CTT-----CHHHHHHHHHHCSSCEEECTT------CCSHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHcCCcee--eCCC--Chh-----hHHHHHHHHhhCCCCEEecCC------cCCHH
Confidence 45555532 45689999999999999998843 3443 121 256778888888999987542 34678
Q ss_pred HHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 593 TLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
.+.++.+ .-+++-+|-. .+....++.+....-++.++.+.
T Consensus 285 ~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~gi~~~~h~ 329 (398)
T 2pp0_A 285 EHEQLILGNASDFVQPDAPRVGGISPFLKIMDLAAKHGRKLAPHF 329 (398)
T ss_dssp HHHHHHHTTCCSEECCCHHHHTSHHHHHHHHHHHHHTTCEECCCS
T ss_pred HHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCeEeecC
Confidence 8888874 4689999988 56555444432222356665543
No 403
>1nmo_A Hypothetical protein YBGI; toroidal structure, structure 2 project, S2F, structural genomics, unknown function; 2.20A {Escherichia coli} SCOP: c.135.1.1 PDB: 1nmp_A
Probab=36.06 E-value=72 Score=32.51 Aligned_cols=58 Identities=12% Similarity=0.229 Sum_probs=38.0
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCC-CCC--CCHHHHHHHHHHHHhc--CCCCEEEEeCCC
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYF-QKK--MTEDLIYEHFISVADN--SPIPVIIYNNTF 583 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~-kps--~S~eeLv~YFraIAeA--tdLPIiLYNiP~ 583 (786)
|++++-.+ . +.++.|.+.|||.+++-=|++| ++. ++.. ..+.|... -+|.+|-||-|-
T Consensus 38 I~~~lD~t--~---~vi~eAi~~~adlIitHHP~~f~~~~~~i~~~----~~~~i~~li~~~I~ly~~Htnl 100 (247)
T 1nmo_A 38 IVTGVTAS--Q---ALLDEAVRLGADAVIVHHGYFWKGESPVIRGM----KRNRLKTLLANDINLYGWHLPL 100 (247)
T ss_dssp EEEEEECC--H---HHHHHHHHTTCSEEEEEECSCCTTSCCCCCTH----HHHHHHHHHHTTCEEEECCHHH
T ss_pred EEEEEcCC--H---HHHHHHHhCCCCEEEECCchhccCCCccccch----HHHHHHHHHHCCCEEEEeeech
Confidence 55555542 3 3367788899999999999988 432 1221 24444443 379999998764
No 404
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=36.03 E-value=43 Score=35.32 Aligned_cols=62 Identities=11% Similarity=0.090 Sum_probs=42.5
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCccCHHHHHHH
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDISVDTLVKL 597 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~LSpelL~rL 597 (786)
..+++++.|+..+++|||++.+-.. + .+ -.++|.+++++|++---. |...|.-|=...+.-|
T Consensus 171 ~a~~~i~rA~a~~eAGA~~ivlE~v----p---~~----~a~~It~~l~iP~igIGaG~~cdgQvLv~~D~lG~ 233 (275)
T 3vav_A 171 GAAQLLRDARAVEEAGAQLIVLEAV----P---TL----VAAEVTRELSIPTIGIGAGAECSGQVLVLHDMLGV 233 (275)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEEESC----C---HH----HHHHHHHHCSSCEEEESSCSCSSEEEECHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCC----C---HH----HHHHHHHhCCCCEEEEccCCCCCceeeeHhhhcCC
Confidence 4578999999999999999988753 2 32 367788889999986543 3334444444444433
No 405
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=35.98 E-value=2.1e+02 Score=30.11 Aligned_cols=105 Identities=11% Similarity=0.153 Sum_probs=66.5
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.+++.+=+ ++.+.++++++++..++.+.+-..+--|. .+. -++.+++|.+++++||+.=.. ..+++
T Consensus 185 ~~~l~vDan~~~~~~~a~~~~~~l~~~~~~i~~iEqP~--~~~-----d~~~~~~l~~~~~ipIa~dE~------~~~~~ 251 (366)
T 1tkk_A 185 AVKLRLDANQGWRPKEAVTAIRKMEDAGLGIELVEQPV--HKD-----DLAGLKKVTDATDTPIMADES------VFTPR 251 (366)
T ss_dssp SSEEEEECTTCSCHHHHHHHHHHHHHTTCCEEEEECCS--CTT-----CHHHHHHHHHHCSSCEEECTT------CCSHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHhhcCCCceEEECCC--Ccc-----cHHHHHHHHhhCCCCEEEcCC------CCCHH
Confidence 45555533 45689999999999999333333555664 222 146677788888999987542 35678
Q ss_pred HHHHHH--hCCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 593 TLVKLA--HHENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 593 lL~rLA--eiPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+.++. ..-+++-+|-. .+....++.+....-++.++.|
T Consensus 252 ~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~ 295 (366)
T 1tkk_A 252 QAFEVLQTRSADLINIKLMKAGGISGAEKINAMAEACGVECMVG 295 (366)
T ss_dssp HHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHHTCCEEEC
T ss_pred HHHHHHHhCCCCEEEeehhhhcCHHHHHHHHHHHHHcCCcEEec
Confidence 888887 35789999988 5655544433111224555554
No 406
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=35.96 E-value=7.6 Score=40.71 Aligned_cols=37 Identities=14% Similarity=0.053 Sum_probs=21.9
Q ss_pred CCCeEEEeCCCC-----CHHHHHHHHHHHHHcCCCEEEEcCC
Q psy11975 513 WQADLLKPQKHT-----TTRATIDLTQKAAKAGANAALILCP 549 (786)
Q Consensus 513 GRVPVIaGVGa~-----ST~EAIELAr~Ae~aGADAVmViPP 549 (786)
++-.|++.+|.. ......++++...+.++..+++..+
T Consensus 231 ~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~ 272 (398)
T 3oti_A 231 ARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGD 272 (398)
T ss_dssp SSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTT
T ss_pred CCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECC
Confidence 455677777776 2233445555566667776666654
No 407
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=35.67 E-value=61 Score=35.05 Aligned_cols=91 Identities=9% Similarity=-0.014 Sum_probs=63.7
Q ss_pred CCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 513 WQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 513 GRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
..+++.+-+ ++.+.++++++++..++.|++.+ --|. .+. -++.+++|.+++++||+.=.. ..++
T Consensus 209 ~d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EeP~--~~~-----d~~~~~~l~~~~~iPIa~dE~------~~~~ 273 (410)
T 2qq6_A 209 PEVEVAIDMHGRFDIPSSIRFARAMEPFGLLWL--EEPT--PPE-----NLDALAEVRRSTSTPICAGEN------VYTR 273 (410)
T ss_dssp SSSEEEEECTTCCCHHHHHHHHHHHGGGCCSEE--ECCS--CTT-----CHHHHHHHHTTCSSCEEECTT------CCSH
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHhhcCCCeE--ECCC--Chh-----hHHHHHHHHhhCCCCEEeCCC------cCCH
Confidence 356666633 45689999999999999998853 3443 121 257788898889999987442 3468
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHH
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMA 618 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll 618 (786)
+.+.++.+ .-+++-+|-. .+....++.
T Consensus 274 ~~~~~~i~~~~~d~v~ik~~~~GGite~~~ia 305 (410)
T 2qq6_A 274 FDFRELFAKRAVDYVMPDVAKCGGLAEAKRIA 305 (410)
T ss_dssp HHHHHHHHTTCCSEECCBHHHHTHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEecCccccCCHHHHHHHH
Confidence 88888884 4689999987 454444443
No 408
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=35.41 E-value=98 Score=32.76 Aligned_cols=104 Identities=10% Similarity=0.050 Sum_probs=69.1
Q ss_pred CCeEEEeC-CCCCHHHHH-HHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 514 QADLLKPQ-KHTTTRATI-DLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAI-ELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
.+++.+-+ ++.+.++++ ++++..++.|++.+ --|+ .+. -++.+++|.+++++||+.=. ...++
T Consensus 185 ~~~l~vDan~~~~~~~a~~~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~iPI~~dE------~~~~~ 249 (369)
T 2p8b_A 185 DIAIRVDVNQGWKNSANTLTALRSLGHLNIDWI--EQPV--IAD-----DIDAMAHIRSKTDLPLMIDE------GLKSS 249 (369)
T ss_dssp TSEEEEECTTTTBSHHHHHHHHHTSTTSCCSCE--ECCB--CTT-----CHHHHHHHHHTCCSCEEEST------TCCSH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHhCCCcEE--ECCC--Ccc-----cHHHHHHHHHhCCCCEEeCC------CCCCH
Confidence 45565533 345789999 99999999998854 4453 222 15677888888899988643 23568
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
+.+.++.+ .-+++-+|-. .+....++.+....-++.++.|.
T Consensus 250 ~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~ 295 (369)
T 2p8b_A 250 REMRQIIKLEAADKVNIKLMKCGGIYPAVKLAHQAEMAGIECQVGS 295 (369)
T ss_dssp HHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHhCCCCEEEeecchhCCHHHHHHHHHHHHHcCCcEEecC
Confidence 88888874 5789999988 56555444332223456666654
No 409
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=35.36 E-value=1.4e+02 Score=31.98 Aligned_cols=115 Identities=10% Similarity=0.070 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHc--CCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCCCCcCCccCHHHHHHHHhC--CC
Q psy11975 528 ATIDLTQKAAKA--GANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNTFVTNIDISVDTLVKLAHH--EN 602 (786)
Q Consensus 528 EAIELAr~Ae~a--GADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~LSpelL~rLAei--PN 602 (786)
+..+.++.+.+. |+|++.+.... . ....+.+..+.|.+.. ++||++=+ -++++...++.+. +.
T Consensus 118 ~~~~~~~~l~~~~~g~~~i~i~~~~--g---~~~~~~~~i~~lr~~~~~~~vi~g~-------v~t~e~A~~a~~aGaD~ 185 (351)
T 2c6q_A 118 SDFEQLEQILEAIPQVKYICLDVAN--G---YSEHFVEFVKDVRKRFPQHTIMAGN-------VVTGEMVEELILSGADI 185 (351)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECSC--T---TBHHHHHHHHHHHHHCTTSEEEEEE-------ECSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHhccCCCCEEEEEecC--C---CcHHHHHHHHHHHHhcCCCeEEEEe-------CCCHHHHHHHHHhCCCE
Confidence 345666666666 99988765322 1 1355788888888888 79998644 3567877777653 33
Q ss_pred E-EEEEe------------C--CHHHHHHHHhhcCCCCEEEEe--CCc--chhhhhhccCCcccccccccc
Q psy11975 603 I-RGVKD------------T--DNIKLANMANQTKDLNFSVFA--GSA--GYLLSGLLVGCAGGINALSAV 654 (786)
Q Consensus 603 V-VGIKD------------S--Dl~ri~~ll~~~~~~df~Vf~--G~D--elLL~aL~~GAdG~Isg~aN~ 654 (786)
| ++.-- . .+.-+.++.+.....++.|+. |-. ..+..+|++||++++.|...+
T Consensus 186 I~v~~g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~fl 256 (351)
T 2c6q_A 186 IKVGIGPGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGMLA 256 (351)
T ss_dssp EEECSSCSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTTT
T ss_pred EEECCCCCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHHh
Confidence 3 22100 0 112223332211112466666 432 247889999999998887654
No 410
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=35.35 E-value=2.3e+02 Score=27.76 Aligned_cols=128 Identities=12% Similarity=0.019 Sum_probs=66.7
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC----CcC---
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF----VTN--- 586 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~----~TG--- 586 (786)
.+||+++-+=.+.++ ++.+.++|||+|++..-... +++.+.+..+..-+...+. -+... ..|
T Consensus 75 ~ipv~v~ggI~~~~~----~~~~l~~Gad~V~lg~~~l~----~p~~~~~~~~~~g~~~~~~---l~~~~g~v~~~g~~~ 143 (244)
T 1vzw_A 75 DIKVELSGGIRDDDT----LAAALATGCTRVNLGTAALE----TPEWVAKVIAEHGDKIAVG---LDVRGTTLRGRGWTR 143 (244)
T ss_dssp SSEEEEESSCCSHHH----HHHHHHTTCSEEEECHHHHH----CHHHHHHHHHHHGGGEEEE---EEEETTEECCSSSCC
T ss_pred CCcEEEECCcCCHHH----HHHHHHcCCCEEEECchHhh----CHHHHHHHHHHcCCcEEEE---EEccCCEEEEcCccc
Confidence 479999766665543 56666789999998753321 1344444444433222111 12110 001
Q ss_pred -CccCH-HHHHHHHh--CCCEEEE--E-----eC-CHHHHHHHHhhcCCCCEEEEeCCc--chhhhhhcc---CCccccc
Q psy11975 587 -IDISV-DTLVKLAH--HENIRGV--K-----DT-DNIKLANMANQTKDLNFSVFAGSA--GYLLSGLLV---GCAGGIN 649 (786)
Q Consensus 587 -v~LSp-elL~rLAe--iPNVVGI--K-----DS-Dl~ri~~ll~~~~~~df~Vf~G~D--elLL~aL~~---GAdG~Is 649 (786)
.. ++ +.+.++.+ ...|... + .. |++.+.++.+. ..-.+-.-.|-. +.+...+.. |++|++.
T Consensus 144 ~~~-~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~~~~~~~i~~~-~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~v 221 (244)
T 1vzw_A 144 DGG-DLYETLDRLNKEGCARYVVTDIAKDGTLQGPNLELLKNVCAA-TDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIV 221 (244)
T ss_dssp CCC-BHHHHHHHHHHTTCCCEEEEEC-------CCCHHHHHHHHHT-CSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred CCC-CHHHHHHHHHhCCCCEEEEeccCcccccCCCCHHHHHHHHHh-cCCCEEEECCCCCHHHHHHHHhhccCCCceeee
Confidence 11 33 44455544 3444322 2 11 67777777652 222233333443 346667778 9999999
Q ss_pred ccccc
Q psy11975 650 ALSAV 654 (786)
Q Consensus 650 g~aN~ 654 (786)
|.+-+
T Consensus 222 G~al~ 226 (244)
T 1vzw_A 222 GKALY 226 (244)
T ss_dssp CHHHH
T ss_pred eHHHH
Confidence 97644
No 411
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=35.18 E-value=1.9e+02 Score=28.54 Aligned_cols=81 Identities=10% Similarity=0.047 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCH---HHHHHHHHHHHh---cCCCCEEEEeCCCCcCCccCHHHHHHHHh-
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTE---DLIYEHFISVAD---NSPIPVIIYNNTFVTNIDISVDTLVKLAH- 599 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~---eeLv~YFraIAe---AtdLPIiLYNiP~~TGv~LSpelL~rLAe- 599 (786)
+...+.++.|+++||..|.+.+........++ +.+++.++.+++ ..++.+.+-|.|.. ..-+++.+.+|.+
T Consensus 84 ~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~--~~~~~~~~~~l~~~ 161 (286)
T 3dx5_A 84 EKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNT--LTDTLPSTLELLGE 161 (286)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTS--TTSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCc--CcCCHHHHHHHHHh
Confidence 34455778888999999988775542211123 345566666655 44899999998753 2236777888873
Q ss_pred --CCCEEEEEeC
Q psy11975 600 --HENIRGVKDT 609 (786)
Q Consensus 600 --iPNVVGIKDS 609 (786)
.|+|.-.=|.
T Consensus 162 ~~~~~vg~~~D~ 173 (286)
T 3dx5_A 162 VDHPNLKINLDF 173 (286)
T ss_dssp HCCTTEEEEEEH
T ss_pred cCCCCeEEEecc
Confidence 4787666665
No 412
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=34.93 E-value=24 Score=31.00 Aligned_cols=59 Identities=12% Similarity=0.075 Sum_probs=44.6
Q ss_pred cCCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCC--cccccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNE--PLSEVEPATLKSLS 411 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~--a~s~V~~k~LkpFs 411 (786)
....|.+|..|=|.=.--||.||+|..-......++|.|-|-+.. .|..++..+|.|+.
T Consensus 16 ~~~~F~vGmkLEA~D~~~~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g 76 (88)
T 2eqm_A 16 PGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLE 76 (88)
T ss_dssp SSCCCCSSCEEEEECTTSCEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCC
T ss_pred CcCcCCCCCEEEEEcCCCCeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEeccc
Confidence 345799999998886666999999987655567899999988742 35555555888874
No 413
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=34.92 E-value=23 Score=31.51 Aligned_cols=55 Identities=5% Similarity=0.076 Sum_probs=42.3
Q ss_pred cCCCCCCCceEEEecccCCCCCccccCCCCC--CCcEEEEEeCCCCCccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVKGYPSWPGKLISPAPT--QGRVWVKWFGMSNEPLSEVEPATLK 408 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~--~g~~~V~fFG~~~~a~s~V~~k~Lk 408 (786)
....|.+|+.||++- +=-|-+|+|++.... ...|.|.|-|-+.+---||..++|.
T Consensus 20 ~~~~~~vG~kv~v~~-~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~ 76 (92)
T 2ro0_A 20 SVDDIIIKCQCWVQK-NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRIN 76 (92)
T ss_dssp CTTSCCTTCEEEEEE-TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEE
T ss_pred ccccccCCCEEEEEE-CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHcc
Confidence 345799999999995 557889999985432 3479999999997655668878774
No 414
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=34.82 E-value=79 Score=34.66 Aligned_cols=105 Identities=17% Similarity=0.255 Sum_probs=66.0
Q ss_pred cCCCCeEEE----eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC
Q psy11975 511 REWQADLLK----PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN 586 (786)
Q Consensus 511 vaGRVPVIa----GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG 586 (786)
++|..||.+ .+-..+.+.+++.+++.+++|||-|=+.-|- .++ .+-+..|.+.+++|++.=
T Consensus 26 IGG~~Pi~VQSMtnt~T~D~~atv~Qi~~l~~aG~diVRvavp~-------~~~-a~al~~I~~~~~vPlvaD------- 90 (366)
T 3noy_A 26 IGGDAPIVVQSMTSTKTHDVEATLNQIKRLYEAGCEIVRVAVPH-------KED-VEALEEIVKKSPMPVIAD------- 90 (366)
T ss_dssp ESTTSCCEEEEECCSCTTCHHHHHHHHHHHHHTTCCEEEEECCS-------HHH-HHHHHHHHHHCSSCEEEE-------
T ss_pred EcCCCcEEEEEecCCCCcCHHHHHHHHHHHHHcCCCEEEeCCCC-------hHH-HHHHHHHHhcCCCCEEEe-------
Confidence 567777766 3555678999999999999999999887652 333 577888888899999864
Q ss_pred CccCHHHHHHHHhCCCEEEEEeC-----CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 587 IDISVDTLVKLAHHENIRGVKDT-----DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 587 v~LSpelL~rLAeiPNVVGIKDS-----Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
+.+.+.++.+-++. .+-.+-.. +-.++.++++.....+..+-.|
T Consensus 91 iHf~~~lal~a~e~-G~dklRINPGNig~~~~~~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 91 IHFAPSYAFLSMEK-GVHGIRINPGNIGKEEIVREIVEEAKRRGVAVRIG 139 (366)
T ss_dssp CCSCHHHHHHHHHT-TCSEEEECHHHHSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCeEEECCcccCchhHHHHHHHHHHHcCCCEEEe
Confidence 12445555444432 12223333 3345555544322234444444
No 415
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=34.71 E-value=1.5e+02 Score=29.94 Aligned_cols=60 Identities=10% Similarity=0.062 Sum_probs=41.1
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
..+++.....+.....+..+.+.+.++||+++.+.. .+.+...++.+. ..++|+++++.+
T Consensus 37 ~~l~i~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~-------~~~~~~~~~~~~-~~~iPvV~~~~~ 96 (325)
T 2x7x_A 37 VSVEIRSAGDDNSKQAEDVHYFMDEGVDLLIISANE-------AAPMTPIVEEAY-QKGIPVILVDRK 96 (325)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSS-------HHHHHHHHHHHH-HTTCCEEEESSC
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCC-------HHHHHHHHHHHH-HCCCeEEEeCCC
Confidence 455555555677777788888888999999998532 333334444443 468999999864
No 416
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=34.64 E-value=16 Score=34.46 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=35.3
Q ss_pred CCCCCCceEEEeccc-----CCCCCccccCCCCCCCcEEEEEeCCCCCccc-ccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKG-----YPSWPGKLISPAPTQGRVWVKWFGMSNEPLS-EVEPATLKSLS 411 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG-----~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s-~V~~k~LkpFs 411 (786)
..|.+||-|=+-.+. ..||+|+|.... +.++.|.|=|-.+ .|. +|..++|++.-
T Consensus 59 ~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~k--g~f~~V~y~~~~~-~~~EiV~~~rlR~~n 118 (128)
T 3h8z_A 59 KEITEGDEVEVYSRANEQEPCGWWLARVRMMK--GDFYVIEYAACDA-TYNEIVTLERLRPVN 118 (128)
T ss_dssp -CCCTTCEEEEEECC---CCCEEEEEEEEEEE--TTEEEEEETTC-----CEEECGGGEEECC
T ss_pred cCCCCCCEEEEEecCCCCCcCccEEEEEEEee--CCEEEEEEcCCCC-CcceEEehhheEeCC
Confidence 468999987665554 359999997764 3678899888443 222 35677777753
No 417
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=34.52 E-value=1.5e+02 Score=28.79 Aligned_cols=83 Identities=8% Similarity=-0.049 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCH----HHHHHHHHHHHhc---CCCCEEEEeCCCC---cCCccCHHHHH
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQKKMTE----DLIYEHFISVADN---SPIPVIIYNNTFV---TNIDISVDTLV 595 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~kps~S~----eeLv~YFraIAeA---tdLPIiLYNiP~~---TGv~LSpelL~ 595 (786)
.+...+.++.|+++|+..|.+.+..+.. ..+. +.+++.++++++. .++.+.+-|.+.. ...--+++.+.
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~-~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~ 162 (260)
T 1k77_A 84 HADIDLALEYALALNCEQVHVMAGVVPA-GEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQAL 162 (260)
T ss_dssp HHHHHHHHHHHHHTTCSEEECCCCBCCT-TSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEECcCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHHHHH
Confidence 3456677788899999998887654321 1122 3356666665544 4788888887532 12234577777
Q ss_pred HHHh---CCCEEEEEeC
Q psy11975 596 KLAH---HENIRGVKDT 609 (786)
Q Consensus 596 rLAe---iPNVVGIKDS 609 (786)
+|.+ .|+|.-.=|.
T Consensus 163 ~l~~~~~~~~~g~~~D~ 179 (260)
T 1k77_A 163 AIVEEVARDNVFIQLDT 179 (260)
T ss_dssp HHHHHHCCTTEEEEEEH
T ss_pred HHHHHhCCCCEEEEeeH
Confidence 7763 4675555554
No 418
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=34.24 E-value=27 Score=37.90 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=21.6
Q ss_pred CCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEc
Q psy11975 514 QADLLK-PQKHTTTRATIDLTQKAAKAGANAALIL 547 (786)
Q Consensus 514 RVPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmVi 547 (786)
++||++ |+ . +.+.|+.|.++|||+|.+.
T Consensus 225 ~~Pv~vkgv--~----t~e~a~~a~~aGad~I~vs 253 (380)
T 1p4c_A 225 PHKLLVKGL--L----SAEDADRCIAEGADGVILS 253 (380)
T ss_dssp CSEEEEEEE--C----CHHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEec--C----cHHHHHHHHHcCCCEEEEc
Confidence 478887 43 2 3567889999999999994
No 419
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=34.09 E-value=8.5 Score=40.54 Aligned_cols=9 Identities=78% Similarity=1.420 Sum_probs=0.0
Q ss_pred CCCCCCCCC
Q psy11975 201 GRSHHHSHH 209 (786)
Q Consensus 201 ~~~~~~~~~ 209 (786)
|.||||+||
T Consensus 2 ~~~~~~~~~ 10 (337)
T 2qv7_A 2 GSSHHHHHH 10 (337)
T ss_dssp ---------
T ss_pred Ccccccccc
Confidence 344444333
No 420
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=33.95 E-value=8.6 Score=39.43 Aligned_cols=8 Identities=0% Similarity=-0.051 Sum_probs=3.8
Q ss_pred CCCEEEEc
Q psy11975 540 GANAALIL 547 (786)
Q Consensus 540 GADAVmVi 547 (786)
.+|+|++.
T Consensus 210 ~~d~v~ft 217 (286)
T 1jr2_A 210 VPASITFF 217 (286)
T ss_dssp SCSEEEES
T ss_pred CCCEEEEE
Confidence 34555544
No 421
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=33.93 E-value=4e+02 Score=27.53 Aligned_cols=130 Identities=11% Similarity=0.126 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHhcCCCC-----EEEEeCCCC--cCCccCHHH
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYF--QKKMTEDLIYEHFISVADNSPIP-----VIIYNNTFV--TNIDISVDT 593 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~--kps~S~eeLv~YFraIAeAtdLP-----IiLYNiP~~--TGv~LSpel 593 (786)
+.+-+...+.++.|.+.|..-|+++--..- ..+.+.+-+.+-.+.+.+..+.. ++.|.=+.. ||..-+++.
T Consensus 102 ~Etd~~v~~Kv~~Al~~GL~pI~CvGE~leere~g~t~~vv~~Ql~~~l~~~~~~~~~~vvIAYEPvWAIGTG~~Atpe~ 181 (250)
T 1yya_A 102 GETDALVAEKAKRLLEEGITPILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPED 181 (250)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHTTTCCCSSGGGCEEEECCGGGSSSSCCCCHHH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCHHHcCcEEEEECCHHHhCCCCCCCHHH
Confidence 456677788899999999999999864421 01113445555556665555444 888985433 788888888
Q ss_pred HHHHHhCCCEEEEEeCCHHHHHHHHhhcC----CCCEEEEeCCc---chhhhhhcc-CCccccccccccccHHHHHHHHH
Q psy11975 594 LVKLAHHENIRGVKDTDNIKLANMANQTK----DLNFSVFAGSA---GYLLSGLLV-GCAGGINALSAVLGGPICELYDL 665 (786)
Q Consensus 594 L~rLAeiPNVVGIKDSDl~ri~~ll~~~~----~~df~Vf~G~D---elLL~aL~~-GAdG~Isg~aN~~Pel~vaL~eA 665 (786)
+.+.. ..+++.+.... ..+++|+.|.. +...+.+.. +.||+..|.+.+-|+-+.+|+++
T Consensus 182 aqevh-------------~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~~F~~ii~~ 248 (250)
T 1yya_A 182 AEAMH-------------QAIRKALSERYGEAFASRVRILYGGSVNPKNFADLLSMPNVDGGLVGGASLELESFLALLRI 248 (250)
T ss_dssp HHHHH-------------HHHHHHHHHHHCHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGSSHHHHHHHHHH
T ss_pred HHHHH-------------HHHHHHHHHhcCccccCceeEEEcCCCCHHHHHHHHcCCCCCeeEeeHHHhChHHHHHHHHh
Confidence 88875 23333332111 23677766653 234444544 99999999999999999999875
No 422
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=33.81 E-value=74 Score=34.34 Aligned_cols=104 Identities=6% Similarity=0.022 Sum_probs=69.3
Q ss_pred CCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHH-hcCCCCEEEEeCCCCcCCccC
Q psy11975 513 WQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVA-DNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 513 GRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIA-eAtdLPIiLYNiP~~TGv~LS 590 (786)
.++++++=+ ++-+.++++++++..++.|++.+= .|. .+. + ++.+++|. +++++||+.=. ...+
T Consensus 194 ~d~~l~vDan~~~~~~~A~~~~~~l~~~~i~~iE--qP~--~~~----d-~~~~~~l~~~~~~iPIa~dE------~i~~ 258 (389)
T 3ozy_A 194 ADVEILVDANQSLGRHDALAMLRILDEAGCYWFE--EPL--SID----D-IEGHRILRAQGTPVRIATGE------NLYT 258 (389)
T ss_dssp TTSEEEEECTTCCCHHHHHHHHHHHHHTTCSEEE--SCS--CTT----C-HHHHHHHHTTCCSSEEEECT------TCCH
T ss_pred CCceEEEECCCCcCHHHHHHHHHHHHhcCCCEEE--CCC--Ccc----c-HHHHHHHHhcCCCCCEEeCC------CCCC
Confidence 345666622 456899999999999999988663 443 121 1 45678888 88899998643 2345
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
++.+.++.+ .-.++-+|-+ .+....++......-++.+..|
T Consensus 259 ~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h 304 (389)
T 3ozy_A 259 RNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPH 304 (389)
T ss_dssp HHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEec
Confidence 778888874 4689999998 5665555443222235666555
No 423
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=33.22 E-value=31 Score=33.90 Aligned_cols=55 Identities=5% Similarity=-0.118 Sum_probs=30.5
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHH-----HHHHHHHHHhc--CCCCEEE
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDL-----IYEHFISVADN--SPIPVII 578 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~ee-----Lv~YFraIAeA--tdLPIiL 578 (786)
.+++|++..+.+| ++.|+ .|||.+.+.| .|-..+ ..+ =.++++.+.+. .++||+.
T Consensus 88 ~~~ig~s~~t~~e----~~~A~-~GaDyv~~g~-vf~t~s--k~~~~~~~g~~~l~~~~~~~~~~iPvia 149 (210)
T 3ceu_A 88 AGHVSCSCHSVEE----VKNRK-HFYDYVFMSP-IYDSIS--KVNYYSTYTAEELREAQKAKIIDSKVMA 149 (210)
T ss_dssp CSEEEEEECSHHH----HHTTG-GGSSEEEECC-CC-----------CCCCHHHHHHHHHTTCSSTTEEE
T ss_pred CCEEEEecCCHHH----HHHHh-hCCCEEEECC-cCCCCC--CCCCCCCCCHHHHHHHHHhcCCCCCEEE
Confidence 3566677666665 34455 7999888754 332111 101 13566777766 5677765
No 424
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=33.13 E-value=73 Score=34.33 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=39.4
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
.+.+||++.+..=.+-|||-|||=|-..| .+-.++|.+..++|+..||.
T Consensus 223 aN~~EAlre~~~Di~EGAD~vMVKPal~Y---------LDIi~~vk~~~~~P~aaYqV 271 (323)
T 1l6s_A 223 MNRREAIRESLLDEAQGADCLMVKPAGAY---------LDIVRELRERTELPIGAYQV 271 (323)
T ss_dssp TCHHHHHHHHHHHHHTTCSBEEEESCTTC---------HHHHHHHHTTCSSCEEEEEC
T ss_pred CCHHHHHHHHHhhHHhCCceEEEecCcch---------hHHHHHHHHhcCCCeEEEEc
Confidence 36788888888888889999999885432 35566888889999999995
No 425
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=33.08 E-value=30 Score=26.48 Aligned_cols=26 Identities=23% Similarity=0.136 Sum_probs=21.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHhhh
Q psy11975 658 PICELYDLAKAGKWEEAMKLQHRLVK 683 (786)
Q Consensus 658 l~vaL~eA~~aGD~eeAreLQ~rL~p 683 (786)
+=.+||-|+.+||++.++.|-.+|..
T Consensus 13 iEQqiyvA~seGd~etv~~Le~QL~~ 38 (40)
T 1gp8_A 13 IRKQMDAAASKGDVETYRKLKAKLKG 38 (40)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHh
Confidence 45678999999999999998877654
No 426
>3nwr_A A rubisco-like protein; lyase; HET: KCX; 1.50A {Burkholderia fungorum}
Probab=32.78 E-value=81 Score=35.25 Aligned_cols=76 Identities=9% Similarity=0.041 Sum_probs=49.3
Q ss_pred cCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcC----
Q psy11975 511 REWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTN---- 586 (786)
Q Consensus 511 vaGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TG---- 586 (786)
++.+.--.++|+ .+.+|.++.++.|.++|++++|+-. +...+ .. .+.+++..++||.++-. ..|
T Consensus 226 TGe~k~y~~NiT-~~~~em~~Ra~~a~e~G~~~~mvd~-~~~G~----~a----~~~l~r~~~~~lh~HrA--~hga~~r 293 (432)
T 3nwr_A 226 SGRPVMVAFNIT-DDLDAMRRHAELVEREGGSCVMASI-NWCGF----SA----IQSLRRTTPLVLHAHRN--GYGMMSR 293 (432)
T ss_dssp HSCCCEEEEECC-SCHHHHHHHHHHHHHTTCCEEEEEH-HHHCH----HH----HHHHHHHCCSEEEEECT--TTTTTTS
T ss_pred hCCcceEEeecC-CCHHHHHHHHHHHHHcCCCEEEEec-cCCCH----HH----HHHHHhcCCceEEECcC--ccccccc
Confidence 443444567999 6899999999999999999998863 21222 22 33444456777777633 333
Q ss_pred ---CccCHHHHHHHH
Q psy11975 587 ---IDISVDTLVKLA 598 (786)
Q Consensus 587 ---v~LSpelL~rLA 598 (786)
..++..++.+|.
T Consensus 294 ~~~~Gi~~~vl~Kl~ 308 (432)
T 3nwr_A 294 DPALGMSFQAYQTLW 308 (432)
T ss_dssp STTEEECHHHHHHHH
T ss_pred CCCCCcCHHHHHHHH
Confidence 235556666665
No 427
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=32.65 E-value=1e+02 Score=30.57 Aligned_cols=77 Identities=12% Similarity=0.037 Sum_probs=50.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCC-CCHHHHHHHHHHHHhc---CCCCEEEEeCCCCcCCccCHHHHHHHHh---
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKK-MTEDLIYEHFISVADN---SPIPVIIYNNTFVTNIDISVDTLVKLAH--- 599 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps-~S~eeLv~YFraIAeA---tdLPIiLYNiP~~TGv~LSpelL~rLAe--- 599 (786)
+...+.++.|+++|+..|.+.+.+..... ...+.+++.++.+++. .++-|.+-|.+ -+++.+.+|.+
T Consensus 102 ~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~------~~~~~~~~l~~~~~ 175 (290)
T 3tva_A 102 AEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQ------ESADHLLEFIEDVN 175 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCS------SCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCC------CCHHHHHHHHHhcC
Confidence 45566778888999999998765432111 0134466667777654 47888888865 25777777773
Q ss_pred CCCEEEEEeC
Q psy11975 600 HENIRGVKDT 609 (786)
Q Consensus 600 iPNVVGIKDS 609 (786)
.|+|.-.=|.
T Consensus 176 ~~~~g~~~D~ 185 (290)
T 3tva_A 176 RPNLGINFDP 185 (290)
T ss_dssp CTTEEEEECH
T ss_pred CCCEEEEecc
Confidence 4776555554
No 428
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=32.55 E-value=49 Score=38.17 Aligned_cols=99 Identities=11% Similarity=0.028 Sum_probs=61.4
Q ss_pred ccCCCCeEEEeC-------CCCCHHHHHHHHHHHHHcCCCEEEEcC---------CCCCCCCCCHHHHHHHHHHHHhcCC
Q psy11975 510 EREWQADLLKPQ-------KHTTTRATIDLTQKAAKAGANAALILC---------PYYFQKKMTEDLIYEHFISVADNSP 573 (786)
Q Consensus 510 evaGRVPVIaGV-------Ga~ST~EAIELAr~Ae~aGADAVmViP---------PyY~kps~S~eeLv~YFraIAeAtd 573 (786)
+++..+||.+=+ ++.+.+|++++++.+++ |+|++-+.. |.|.... ....+.+.|.++++
T Consensus 220 ~~g~~~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~-~~d~~~v~~~~~~~~~~~~~~~~~~----~~~~~~~~i~~~~~ 294 (690)
T 3k30_A 220 ECAGRAAVACRITVEEEIDGGITREDIEGVLRELGE-LPDLWDFAMGSWEGDSVTSRFAPEG----RQEEFVAGLKKLTT 294 (690)
T ss_dssp HHTTSSEEEEEEECCCCSTTSCCHHHHHHHHHHHTT-SSSEEEEECSCHHHHTCCTTTCCTT----TTHHHHTTSGGGCS
T ss_pred HhCCCceEEEEECccccCCCCCCHHHHHHHHHHHHh-hcCEEEEecccccccCCCCccCCcc----ccHHHHHHHHHHcC
Confidence 344466777654 34568999999999998 899986643 3333221 12456666777789
Q ss_pred CCEEEEeCCCCcCCccCHHHHHHHHhCC--CEEEEEeC---CHHHHHHHHh
Q psy11975 574 IPVIIYNNTFVTNIDISVDTLVKLAHHE--NIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 574 LPIiLYNiP~~TGv~LSpelL~rLAeiP--NVVGIKDS---Dl~ri~~ll~ 619 (786)
+||+. .|.-.+++...++.+.. .+|++==. |++-..++.+
T Consensus 295 ~pvi~------~G~i~~~~~a~~~l~~g~~d~v~~gR~~~~~P~~~~~~~~ 339 (690)
T 3k30_A 295 KPVVG------VGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRD 339 (690)
T ss_dssp SCEEE------CSCCCCHHHHHHHHHTTSCSEEEESHHHHHCTTHHHHHHT
T ss_pred CeEEE------eCCCCCHHHHHHHHHCCCcceEEEcHHhHhCccHHHHHHc
Confidence 99875 34445688888877543 34444333 5555555543
No 429
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=32.48 E-value=1.6e+02 Score=31.23 Aligned_cols=116 Identities=13% Similarity=0.082 Sum_probs=73.0
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-------h
Q psy11975 530 IDLTQKAAKAGANAALILCPYYF---QKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-------H 599 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY~---kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-------e 599 (786)
++-+..|++.|||.|=+-.-.+. .|+ +..++.+.+.+++||.+==-|.-..+-++.+.+..+. +
T Consensus 49 ~~~a~~A~~gGAdRIELc~~l~~GGlTPS------~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~ 122 (287)
T 3iwp_A 49 VESAVNAERGGADRIELCSGLSEGGTTPS------MGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKL 122 (287)
T ss_dssp HHHHHHHHHHTCSEEEECBCGGGTCBCCC------HHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEECCCCCCCCCCCC------HHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHH
Confidence 44566789999999998866553 233 3455666667789999888886555778865544332 2
Q ss_pred --C-CCEEEE--EeC--CHHHHHHHHhhcCCCCEEEEeCCcch-----hhhh-hccCCccccccc
Q psy11975 600 --H-ENIRGV--KDT--DNIKLANMANQTKDLNFSVFAGSAGY-----LLSG-LLVGCAGGINAL 651 (786)
Q Consensus 600 --i-PNVVGI--KDS--Dl~ri~~ll~~~~~~df~Vf~G~Del-----LL~a-L~~GAdG~Isg~ 651 (786)
. .-|+|+ .|. |..++.++++...+-.+.+--..|.. .++. ..+|++-++++.
T Consensus 123 ~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG 187 (287)
T 3iwp_A 123 YGADGLVFGALTEDGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTLGFERVLTSG 187 (287)
T ss_dssp TTCSEEEECCBCTTSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECT
T ss_pred cCCCEEEEeeeCCCCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC
Confidence 2 336676 444 89999999885444455555554531 2222 234777666544
No 430
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=32.43 E-value=1.6e+02 Score=29.22 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCC----CCCCCH---HHHHHHHHHHHh---cCCCCEEEEeCCCCcCC-ccCHHHHH
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYF----QKKMTE---DLIYEHFISVAD---NSPIPVIIYNNTFVTNI-DISVDTLV 595 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~----kps~S~---eeLv~YFraIAe---AtdLPIiLYNiP~~TGv-~LSpelL~ 595 (786)
+...+.++.|+++|+..|.+.+.+.. .+. .+ +.+++.++.+++ ..++-|.+-|.+...+. --+++.+.
T Consensus 104 ~~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~-~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~ 182 (287)
T 3kws_A 104 DTMKEIIAAAGELGSTGVIIVPAFNGQVPALPH-TMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAA 182 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEECSCCTTCCSBCCS-SHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEecCcCCcCCCCCC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHH
Confidence 44556778889999999988765321 111 12 334555665554 45899999987533222 33677787
Q ss_pred HHHh---CCCEEEEEeC
Q psy11975 596 KLAH---HENIRGVKDT 609 (786)
Q Consensus 596 rLAe---iPNVVGIKDS 609 (786)
+|.+ .|+|.-.=|.
T Consensus 183 ~ll~~v~~~~vg~~~D~ 199 (287)
T 3kws_A 183 SLCRDINNPGVRCMGDF 199 (287)
T ss_dssp HHHHHHCCTTEEEEEEH
T ss_pred HHHHHcCCCCeeEEeeh
Confidence 8773 4886666665
No 431
>3quf_A Extracellular solute-binding protein, family 1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Bifidobacterium longum subsp}
Probab=32.17 E-value=9.6 Score=40.01 Aligned_cols=11 Identities=9% Similarity=-0.010 Sum_probs=6.2
Q ss_pred CHHHHHHHHHh
Q psy11975 468 PIQKRKSLLRK 478 (786)
Q Consensus 468 T~dER~~Lle~ 478 (786)
|-+|-.++++.
T Consensus 159 Twdel~~~~~~ 169 (414)
T 3quf_A 159 TWDEFIEMGKK 169 (414)
T ss_dssp BHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 55555555554
No 432
>2b3f_A Glucose-binding protein; protein-carbohydrate complex, periplasmic binding protein, galactose, GBP, sugar binding protein; HET: GAL; 1.56A {Thermus thermophilus HB27} PDB: 2b3b_A*
Probab=32.11 E-value=11 Score=39.66 Aligned_cols=13 Identities=38% Similarity=0.503 Sum_probs=3.7
Q ss_pred ccccCCCCCCCCC
Q psy11975 197 HRSYGRSHHHSHH 209 (786)
Q Consensus 197 ~~~~~~~~~~~~~ 209 (786)
-+.+||.|||+||
T Consensus 388 ~~~~~~~~~~~~~ 400 (400)
T 2b3f_A 388 GLGRLGQHHHHHH 400 (400)
T ss_dssp TTTCC--------
T ss_pred hhcccccccccCC
Confidence 4678998887554
No 433
>4fl4_A Glycoside hydrolase family 9; structural genomics, montreal-kingston bacterial structural initiative, BSGI, dockerin; 2.80A {Clostridium thermocellum} PDB: 3p0d_A
Probab=32.08 E-value=9.6 Score=33.78 Aligned_cols=17 Identities=35% Similarity=0.233 Sum_probs=7.6
Q ss_pred cccccccccccccccccc
Q psy11975 233 TMFGPVSRLCLKVTSRTL 250 (786)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~ 250 (786)
.++|-|. -+-+|.+-|.
T Consensus 20 ~~~GDvN-gDG~Vn~~D~ 36 (88)
T 4fl4_A 20 RHMGDVN-DDGKVNSTDL 36 (88)
T ss_dssp -CTTCTT-CSSCCSHHHH
T ss_pred CccccCC-CCCcCCHHHH
Confidence 3456553 2444555443
No 434
>1of8_A Phospho-2-dehydro-3-deoxyheptonate aldolase, tyrosine-inhibited; beta-alpha-barrel, lyase, synthase, synthetase; HET: PEP G3P; 1.5A {Saccharomyces cerevisiae} SCOP: c.1.10.4 PDB: 1oab_A* 1of6_A* 1hfb_A* 1ofa_A* 1ofb_A 1ofo_A 1ofp_A 1ofq_A 1ofr_A* 1og0_A*
Probab=32.08 E-value=3.4e+02 Score=29.77 Aligned_cols=105 Identities=11% Similarity=0.010 Sum_probs=67.6
Q ss_pred CCCCeEEEeCCC-CCHHHHHHHHHHHHHcCCC----EEEEcCCCCCCCCCCH-----------------HHHHHHHHHHH
Q psy11975 512 EWQADLLKPQKH-TTTRATIDLTQKAAKAGAN----AALILCPYYFQKKMTE-----------------DLIYEHFISVA 569 (786)
Q Consensus 512 aGRVPVIaGVGa-~ST~EAIELAr~Ae~aGAD----AVmViPPyY~kps~S~-----------------eeLv~YFraIA 569 (786)
++|+-||+|=.+ .+.+.+++.|+..++++.. -.+++=-||+||..+. ++=+...+++.
T Consensus 66 d~rllvIaGPCSIed~e~aleyA~~Lk~~~~~~~d~l~iVmR~yfeKPRTs~GwKGli~dP~ld~Sf~g~~GL~i~r~ll 145 (370)
T 1of8_A 66 DDRVLVIVGPCSIHDLEAAQEYALRLKKLSDELKGDLSIIMRAYLEKPRTTVGWKGLINDPDVNNTFNINKGLQSARQLF 145 (370)
T ss_dssp CCSEEEEEECSCCCCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSSSCCCTTTCTTSSSCCCHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCcCCCHHHHHHHHHHHHHHHHhhccCeEEEEEeccccccCCccccccccCCCcCCCcCHHHHHHHHHHHH
Confidence 357788887544 6788888888888877665 4555556777874333 44466655555
Q ss_pred ---hcCCCCEEEE-----------------eCCCCcCCccCHHHHHHHH-hCCCEEEEEeC---CHHHHHHHHh
Q psy11975 570 ---DNSPIPVIIY-----------------NNTFVTNIDISVDTLVKLA-HHENIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 570 ---eAtdLPIiLY-----------------NiP~~TGv~LSpelL~rLA-eiPNVVGIKDS---Dl~ri~~ll~ 619 (786)
...++|++-= -+|+++- .-.++.++| .....||+|.. ++..+...+.
T Consensus 146 ~~v~e~GlPvaTEvld~~~~qyv~Dllsw~aIGARt~---esq~hre~Asgl~~PVg~Kngt~g~i~~~~~Ai~ 216 (370)
T 1of8_A 146 VNLTNIGLPIGSEMLDTISPQYLADLVSFGAIGARTT---ESQLHRELASGLSFPVGFKNGTDGTLNVAVDACQ 216 (370)
T ss_dssp HHHHTTTCCEEEECCSSSTHHHHGGGCSEEEECTTTT---TCHHHHHHHHTCSSCEEEECCTTSCSHHHHHHHH
T ss_pred HHHHHcCCceEEeecCcccHHHHHHHHhhccccCccc---ccHHHHHHHhcCCCeEEEcCCCCCCHHHHHHHHH
Confidence 5779998631 1232221 125667777 68999999999 5665554443
No 435
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=32.00 E-value=3.2e+02 Score=29.28 Aligned_cols=107 Identities=12% Similarity=0.030 Sum_probs=74.0
Q ss_pred CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCC--CCEEEEeCCCCcCCccC
Q psy11975 513 WQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSP--IPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 513 GRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtd--LPIiLYNiP~~TGv~LS 590 (786)
.++|+.+.++..+.++.++.++.+.+.|..++=+=.- . +.++-++.+++|.++.+ ++|++=-+ . .++
T Consensus 130 ~~v~~y~t~g~~~~e~~~~~a~~~~~~Gf~~~KlK~g----~--~~~~d~~~v~avR~a~g~~~~L~vDaN---~--~w~ 198 (379)
T 3r0u_A 130 NSIVTDVSISCGNVAETIQNIQNGVEANFTAIKVKTG----A--DFNRDIQLLKALDNEFSKNIKFRFDAN---Q--GWN 198 (379)
T ss_dssp CEEEBCEEECCCCHHHHHHHHHHHHHTTCCEEEEECS----S--CHHHHHHHHHHHHHHCCTTSEEEEECT---T--CCC
T ss_pred CeEEEEEEecCCCHHHHHHHHHHHHHcCCCEEeeecC----C--CHHHHHHHHHHHHHhcCCCCeEEEeCC---C--CcC
Confidence 4677877777788999999999999999999876432 1 36777889999999884 77776322 2 345
Q ss_pred HHHHHHHH----hC-CCEEEEEeC----CHHHHHHHHhhcCCCCEEEEeCCc
Q psy11975 591 VDTLVKLA----HH-ENIRGVKDT----DNIKLANMANQTKDLNFSVFAGSA 633 (786)
Q Consensus 591 pelL~rLA----ei-PNVVGIKDS----Dl~ri~~ll~~~~~~df~Vf~G~D 633 (786)
.+...+++ +. -++..|=+- |+..++++.++ -.+.|..|..
T Consensus 199 ~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~---~~iPIa~dE~ 247 (379)
T 3r0u_A 199 LAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKF---SNIPVVADES 247 (379)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHH---CSSCEEESTT
T ss_pred HHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhc---CCCCEEeCCc
Confidence 66655554 22 268777766 67777777653 2466666643
No 436
>1qwz_A NPQTN specific sortase B; beta barrel, transpeptidase, hydrolase; 1.75A {Staphylococcus aureus} SCOP: b.100.1.1 PDB: 1qxa_A 1ng5_A 1qx6_A*
Probab=31.99 E-value=16 Score=37.48 Aligned_cols=12 Identities=17% Similarity=0.094 Sum_probs=8.3
Q ss_pred CCHHHHHHHHHh
Q psy11975 467 MPIQKRKSLLRK 478 (786)
Q Consensus 467 LT~dER~~Lle~ 478 (786)
-+.+|+.++++.
T Consensus 178 ~~~~~~~~~l~~ 189 (235)
T 1qwz_A 178 ENDQDYQQFLDE 189 (235)
T ss_dssp SSHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 456788777765
No 437
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=31.88 E-value=80 Score=31.62 Aligned_cols=61 Identities=10% Similarity=0.066 Sum_probs=43.0
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..+++.....+.....+..+.+.+.++||+++.+... +.....++.+ ...++|++++|.+.
T Consensus 34 ~~~~~~~~~~~~~~~~~~i~~~~~~~vdgiIi~~~~~-------~~~~~~~~~~-~~~giPvV~~~~~~ 94 (330)
T 3uug_A 34 YKTDLQYADDDIPNQLSQIENMVTKGVKVLVIASIDG-------TTLSDVLKQA-GEQGIKVIAYDRLI 94 (330)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHHTCSEEEECCSSG-------GGGHHHHHHH-HHTTCEEEEESSCC
T ss_pred CEEEEeeCCCCHHHHHHHHHHHHHcCCCEEEEEcCCc-------hhHHHHHHHH-HHCCCCEEEECCCC
Confidence 4455555677888888999999889999999986431 1233444443 35689999999754
No 438
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=31.87 E-value=50 Score=32.25 Aligned_cols=54 Identities=15% Similarity=0.066 Sum_probs=28.0
Q ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHH----HHHHHHHHHHhcCCCCEEE
Q psy11975 518 LKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTED----LIYEHFISVADNSPIPVII 578 (786)
Q Consensus 518 IaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~e----eLv~YFraIAeAtdLPIiL 578 (786)
++|++..+.+ .++.|.+.|||.|++.+- |...+ .. .-.++++++.+..++||++
T Consensus 112 ~ig~sv~t~~----~~~~a~~~gaD~i~~~~~-f~~~~--~~g~~~~~~~~l~~~~~~~~~pvia 169 (221)
T 1yad_A 112 HIGRSVHSLE----EAVQAEKEDADYVLFGHV-FETDC--KKGLEGRGVSLLSDIKQRISIPVIA 169 (221)
T ss_dssp EEEEEECSHH----HHHHHHHTTCSEEEEECC-C------------CHHHHHHHHHHHCCSCEEE
T ss_pred EEEEEcCCHH----HHHHHHhCCCCEEEECCc-cccCC--CCCCCCCCHHHHHHHHHhCCCCEEE
Confidence 3444444444 356778899999988653 21111 11 1135555555555555543
No 439
>2c43_A Aminoadipate-semialdehyde dehydrogenase- phosphopantetheinyl transferase; fatty acid biosynthesis, coenzyme A; HET: COA; 1.93A {Homo sapiens} PDB: 2byd_A* 2cg5_A*
Probab=31.81 E-value=13 Score=39.69 Aligned_cols=14 Identities=64% Similarity=1.066 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCC
Q psy11975 201 GRSHHHSHHHRSHS 214 (786)
Q Consensus 201 ~~~~~~~~~~~~~~ 214 (786)
|.||||+|||.|.-
T Consensus 2 ~~~~~~~~~~~~~~ 15 (323)
T 2c43_A 2 GSSHHHHHHHSSGR 15 (323)
T ss_dssp --------------
T ss_pred Cccccccccccchh
Confidence 56777766665543
No 440
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=31.75 E-value=2.1e+02 Score=35.68 Aligned_cols=199 Identities=16% Similarity=0.108 Sum_probs=96.0
Q ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCC--CEEEEe---CCCCcCCccCHHHHHHHH----h
Q psy11975 529 TIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPI--PVIIYN---NTFVTNIDISVDTLVKLA----H 599 (786)
Q Consensus 529 AIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdL--PIiLYN---iP~~TGv~LSpelL~rLA----e 599 (786)
..+.++.|.++|+|.+-+..+.-. .+.+..+.+.+.+.-.+ ..+.|- +........+++.+.+++ +
T Consensus 629 ~~~~v~~a~~~Gvd~irif~~~sd-----~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~ 703 (1150)
T 3hbl_A 629 IHKFVQESAKAGIDVFRIFDSLNW-----VDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELER 703 (1150)
T ss_dssp HHHHHHHHHHTTCCEEEEECTTCC-----GGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcCEEEEEeeCCH-----HHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHH
Confidence 445688889999999877654432 22233444444433211 122222 111111224556666655 3
Q ss_pred C-CCEEEEEeC----CHHHHHHHHhh---cCCCCEEEEeCCcc-----hhhhhhccCCc---ccccccccc--ccHHHHH
Q psy11975 600 H-ENIRGVKDT----DNIKLANMANQ---TKDLNFSVFAGSAG-----YLLSGLLVGCA---GGINALSAV--LGGPICE 661 (786)
Q Consensus 600 i-PNVVGIKDS----Dl~ri~~ll~~---~~~~df~Vf~G~De-----lLL~aL~~GAd---G~Isg~aN~--~Pel~va 661 (786)
. ..+++|||+ .+..+.++++. ..+-.+.+-+=+|. ..+.++.+|++ +++.|++.- .| -+..
T Consensus 704 ~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ai~GlG~~~gn~-~lE~ 782 (1150)
T 3hbl_A 704 EGFHILAIKDMAGLLKPKAAYELIGELKSAVDLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTAVASMSGLTSQP-SANS 782 (1150)
T ss_dssp TTCSEEEEEETTCCCCHHHHHHHHHHHHHHCCSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEBCGGGCSBTSCC-BHHH
T ss_pred cCCCeeeEcCccCCCCHHHHHHHHHHHHHhcCCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEeccccCCCCCCc-cHHH
Confidence 3 579999999 55555554431 23334554443331 24567778884 555555332 12 2223
Q ss_pred HHHHHHc-C-----CHHHHHHHHHHhhhhHHHHHhhh-------------hccccCHHHHHHHHHHcCCCCCCCCCCCCC
Q psy11975 662 LYDLAKA-G-----KWEEAMKLQHRLVKPDVTVRNVL-------------LMKEMGVPGVRAAMELYGYYGGRSRRPLPA 722 (786)
Q Consensus 662 L~eA~~a-G-----D~eeAreLQ~rL~pLi~~l~~~~-------------~~~~~~ia~lKaaL~lrGI~~G~vR~PL~~ 722 (786)
+..+++. | |+++..++.+.+..+......+. +..++.+.-++.-|+.+|+.
T Consensus 783 lv~~L~~~g~~tgidl~~l~~~~~~~~~~~~~y~~~~~~~~~~~~~v~~~~~PGg~~snl~~q~~~~g~~---------- 852 (1150)
T 3hbl_A 783 LYYALNGFPRHLRTDIEGMESLSHYWSTVRTYYSDFESDIKSPNTEIYQHEMPGGQYSNLSQQAKSLGLG---------- 852 (1150)
T ss_dssp HHHHTTTSSCCBCSCHHHHHHHHHHHHHHHGGGGGGCCSCCSCCTTHHHHCCCSSHHHHHHHHHHHTTCG----------
T ss_pred HHHHHHhcCCCcCccHHHHHHHHHHHHHHHhhhccccCCCCCCccceEEeeCCCchhhHHHHHHHHCCcH----------
Confidence 3333332 2 45554444444443332210000 00111245566666666642
Q ss_pred CCCHHHHHHHHHHHHHcCCCC
Q psy11975 723 ALKPGGAEKIKQVLTEAGFLV 743 (786)
Q Consensus 723 pLseeekaeL~~~L~~lGll~ 743 (786)
..-++-++++.++=+.+|.+.
T Consensus 853 ~~~~~v~~~~~~v~~~~g~~~ 873 (1150)
T 3hbl_A 853 ERFDEVKDMYRRVNFLFGDIV 873 (1150)
T ss_dssp GGHHHHHHHHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHcCCCc
Confidence 222555566666666777643
No 441
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=31.72 E-value=45 Score=35.86 Aligned_cols=106 Identities=9% Similarity=-0.031 Sum_probs=68.7
Q ss_pred CCCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
+..+++++-+ ++.+.++++++++..++.|++. +--|. .+. -++.+++|.+++++||+.=. ...+
T Consensus 207 G~d~~l~vDan~~~~~~~ai~~~~~l~~~~i~~--iE~P~--~~~-----d~~~~~~l~~~~~iPIa~dE------~~~~ 271 (403)
T 2ox4_A 207 GPDVDIIVENHGHTDLVSAIQFAKAIEEFNIFF--YEEIN--TPL-----NPRLLKEAKKKIDIPLASGE------RIYS 271 (403)
T ss_dssp CTTSEEEEECTTCSCHHHHHHHHHHHGGGCEEE--EECCS--CTT-----STHHHHHHHHTCCSCEEECT------TCCH
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhhCCCE--EeCCC--Chh-----hHHHHHHHHHhCCCCEEecC------CcCC
Confidence 3456777633 4568999999999999988764 44453 121 25667888888899988643 2345
Q ss_pred HHHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
++.+.++.+ .-+++-+|-. .+....++.+....-++.+..+.
T Consensus 272 ~~~~~~~i~~~~~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~~h~ 318 (403)
T 2ox4_A 272 RWGFLPFLEDRSIDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQAHV 318 (403)
T ss_dssp HHHHHHHHHTTCCSEECCCHHHHTHHHHHHHHHHHHHHTTCEECCCC
T ss_pred HHHHHHHHHcCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEeecC
Confidence 788888874 4689999988 45444444332122345555543
No 442
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=31.67 E-value=99 Score=32.72 Aligned_cols=66 Identities=15% Similarity=0.176 Sum_probs=45.3
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcC----CCCCCCCCCHHHHHHHH---HHHHhcCCCCEEEEeCCCCcCCccCHHHHHHH
Q psy11975 525 TTRATIDLTQKAAKAGANAALILC----PYYFQKKMTEDLIYEHF---ISVADNSPIPVIIYNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViP----PyY~kps~S~eeLv~YF---raIAeAtdLPIiLYNiP~~TGv~LSpelL~rL 597 (786)
+.++++++|+...+.|||-|=|-. |....-+ .++++.+.. ++|.+.+++||.+-- ..++.+.+-
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~-~~eE~~RvvpvI~~l~~~~~vpiSIDT--------~~~~V~~aA 131 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVS-VEEEIKRVVPMIQAVSKEVKLPISIDT--------YKAEVAKQA 131 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCC-HHHHHHHHHHHHHHHHHHSCSCEEEEC--------SCHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCC-HHHHHHHHHHHHHHHHhcCCceEEEeC--------CCHHHHHHH
Confidence 468999999999999999998885 3322222 256665555 777777789988743 346666665
Q ss_pred Hh
Q psy11975 598 AH 599 (786)
Q Consensus 598 Ae 599 (786)
++
T Consensus 132 l~ 133 (297)
T 1tx2_A 132 IE 133 (297)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 443
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=31.65 E-value=77 Score=34.40 Aligned_cols=28 Identities=14% Similarity=0.219 Sum_probs=21.2
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALI 546 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmV 546 (786)
.++||+|... +.+.|+.|+++|||+|.+
T Consensus 149 ~v~Vi~G~v~-----t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 149 HLEIIGGNVA-----TAEGARALIEAGVSAVKV 176 (366)
T ss_dssp TCEEEEEEEC-----SHHHHHHHHHHTCSEEEE
T ss_pred CCceEeeeeC-----CHHHHHHHHHcCCCEEEE
Confidence 5788886332 345677888999999999
No 444
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=31.64 E-value=62 Score=35.22 Aligned_cols=49 Identities=14% Similarity=0.329 Sum_probs=37.7
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
+..||++.+..=.+-|||.|||=|-..| .+-.++|.+..++|+..||.-
T Consensus 245 N~~EAlrE~~lDi~EGAD~vMVKPal~Y---------LDIi~~vk~~~~~PvaaYqVS 293 (356)
T 3obk_A 245 NSREAEREAEADASEGADMLMVKPGLPY---------LDVLAKIREKSKLPMVAYHVS 293 (356)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESSGGG---------HHHHHHHHHHCSSCEEEEECH
T ss_pred CHHHHHHHHHhhHhcCCCEEEecCCCcH---------HHHHHHHHhcCCCCEEEEEcc
Confidence 4588888887777889999999875322 345566777889999999953
No 445
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=31.36 E-value=85 Score=33.32 Aligned_cols=105 Identities=10% Similarity=0.082 Sum_probs=69.0
Q ss_pred CCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCH
Q psy11975 513 WQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISV 591 (786)
Q Consensus 513 GRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSp 591 (786)
.++++++=+ ++.+.++++++++..++.|++.+ --|.- +. + ++.+++|.+++++||+.=. ...++
T Consensus 182 ~~~~l~vDan~~~~~~~a~~~~~~L~~~~i~~i--EqP~~--~~----d-~~~~~~l~~~~~iPIa~dE------~~~~~ 246 (354)
T 3jva_A 182 FDIKLRLDANQAWTPKDAVKAIQALADYQIELV--EQPVK--RR----D-LEGLKYVTSQVNTTIMADE------SCFDA 246 (354)
T ss_dssp TTSEEEEECTTCSCHHHHHHHHHHTTTSCEEEE--ECCSC--TT----C-HHHHHHHHHHCSSEEEEST------TCCSH
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHhcCCCEE--ECCCC--hh----h-HHHHHHHHHhCCCCEEEcC------CcCCH
Confidence 355666622 45689999999999988765543 45542 21 1 4567788888999998743 24567
Q ss_pred HHHHHHHh--CCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 592 DTLVKLAH--HENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 592 elL~rLAe--iPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
+.+.++.+ --.++-+|-+ .+....++.+....-++.++.|.
T Consensus 247 ~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 292 (354)
T 3jva_A 247 QDALELVKKGTVDVINIKLMKCGGIHEALKINQICETAGIECMIGC 292 (354)
T ss_dssp HHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCeEEecC
Confidence 88888873 5789999988 56555544332223456776654
No 446
>2jqj_A DNA damage response protein kinase DUN1; protein/phosphopeptide, cell cycle; HET: DNA; NMR {Saccharomyces cerevisiae} PDB: 2jql_A*
Probab=31.35 E-value=18 Score=34.12 Aligned_cols=13 Identities=69% Similarity=1.165 Sum_probs=4.0
Q ss_pred CCccccCCCCCCCC
Q psy11975 195 PTHRSYGRSHHHSH 208 (786)
Q Consensus 195 ~~~~~~~~~~~~~~ 208 (786)
-.+++| |+|||.|
T Consensus 138 ~~~~~~-~~~~~~~ 150 (151)
T 2jqj_A 138 SESRSY-RSHHHHH 150 (151)
T ss_dssp SSSSCC--------
T ss_pred HHhhhh-hhccccC
Confidence 457777 5555433
No 447
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=31.34 E-value=1.3e+02 Score=29.34 Aligned_cols=81 Identities=12% Similarity=0.122 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCC----HHHHHHHHHHHHhcC---CCCEEEEeCCCC----cCCccCHHHHH
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMT----EDLIYEHFISVADNS---PIPVIIYNNTFV----TNIDISVDTLV 595 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S----~eeLv~YFraIAeAt---dLPIiLYNiP~~----TGv~LSpelL~ 595 (786)
+...+.++.|+++|+..|.+.+-.+.....+ .+.+++.++.+++.+ ++.+.+-|.... ....-+++.+.
T Consensus 83 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~ 162 (275)
T 3qc0_A 83 DDNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQAL 162 (275)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHH
Confidence 4556678888999999998876332111111 234566666666544 899999985321 12334678888
Q ss_pred HHHh-CCCEEEEEeC
Q psy11975 596 KLAH-HENIRGVKDT 609 (786)
Q Consensus 596 rLAe-iPNVVGIKDS 609 (786)
+|.+ ++. .++..
T Consensus 163 ~l~~~~~~--~vg~~ 175 (275)
T 3qc0_A 163 DICETLGP--GVGVA 175 (275)
T ss_dssp HHHHHHCT--TEEEE
T ss_pred HHHHHhCc--ccEEE
Confidence 8873 553 34444
No 448
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=31.23 E-value=3.5e+02 Score=29.04 Aligned_cols=106 Identities=7% Similarity=0.034 Sum_probs=71.8
Q ss_pred CC-CeEEEeC-C-CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEEeCCCCcCC
Q psy11975 513 WQ-ADLLKPQ-K-HTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVIIYNNTFVTNI 587 (786)
Q Consensus 513 GR-VPVIaGV-G-a~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiLYNiP~~TGv 587 (786)
.+ +|+.+.+ + ..+.++.++.++.+.+.|.+++=+--- . +.+.-++.+++|-+++ +++|++ |. ..+
T Consensus 136 ~~~v~~y~~~~~~~~~~e~~~~~a~~~~~~G~~~iKiKvG----~--~~~~d~~~v~avR~a~g~d~~l~v-Da--n~~- 205 (389)
T 3ozy_A 136 TRGVRAYASSIYWDLTPDQAADELAGWVEQGFTAAKLKVG----R--APRKDAANLRAMRQRVGADVEILV-DA--NQS- 205 (389)
T ss_dssp TTCEEEEEEEECSSCCHHHHHHHHHHHHHTTCSEEEEECC----S--CHHHHHHHHHHHHHHHCTTSEEEE-EC--TTC-
T ss_pred CCceeeEEecCCCCCCHHHHHHHHHHHHHCCCCEEeeccC----C--CHHHHHHHHHHHHHHcCCCceEEE-EC--CCC-
Confidence 46 8888876 6 778999999999999999999876421 1 3677788899998887 578876 32 223
Q ss_pred ccCHHHHHHHH----hCCCEEEEEeC----CHHHHHHHH-hhcCCCCEEEEeCCc
Q psy11975 588 DISVDTLVKLA----HHENIRGVKDT----DNIKLANMA-NQTKDLNFSVFAGSA 633 (786)
Q Consensus 588 ~LSpelL~rLA----eiPNVVGIKDS----Dl~ri~~ll-~~~~~~df~Vf~G~D 633 (786)
++.+...+++ +. +|..|-+- |+..+.++. + .-++.|..+..
T Consensus 206 -~~~~~A~~~~~~l~~~-~i~~iEqP~~~~d~~~~~~l~~~---~~~iPIa~dE~ 255 (389)
T 3ozy_A 206 -LGRHDALAMLRILDEA-GCYWFEEPLSIDDIEGHRILRAQ---GTPVRIATGEN 255 (389)
T ss_dssp -CCHHHHHHHHHHHHHT-TCSEEESCSCTTCHHHHHHHHTT---CCSSEEEECTT
T ss_pred -cCHHHHHHHHHHHHhc-CCCEEECCCCcccHHHHHHHHhc---CCCCCEEeCCC
Confidence 4455544443 33 46566555 677777765 4 23577776654
No 449
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=30.97 E-value=19 Score=34.35 Aligned_cols=61 Identities=10% Similarity=0.087 Sum_probs=45.1
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCC-----------------------------CC-----------CcEEEEEeCC
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAP-----------------------------TQ-----------GRVWVKWFGM 394 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~-----------------------------~~-----------g~~~V~fFG~ 394 (786)
..|.+|+.|.+.-.+. |++|+|+.... .. .+|.|.|-|=
T Consensus 8 ~~f~~gekvl~~hg~l-lYeAKVl~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~Y~VHY~GW 86 (136)
T 2k3y_A 8 QEFALGGRVLAFHGPL-MYEAKILKIWDPSSKMYTSIPNDKPGGSSQATKEIKPQKLGEDESIPEEIINGKSFFIHYQGW 86 (136)
T ss_dssp GSCCTTSEEEEECSSC-EEEEEEEEEEETTTTEEEECSSCCCTTCSCCCSSBCCCCSCSSCCCCHHHHTSCEEEECCTTS
T ss_pred cccCCCCEEEEEECCe-eEEEEEEEEEeccccccccccccccccccccccccccccccccccCcccccccceEEEEeCCc
Confidence 4699999999998544 99999986321 01 1799999998
Q ss_pred CCCcccccccccccccccc-hHH
Q psy11975 395 SNEPLSEVEPATLKSLSQG-LEA 416 (786)
Q Consensus 395 ~~~a~s~V~~k~LkpFsEg-lEa 416 (786)
+.+=--||..+.|..|++. ++.
T Consensus 87 n~rwDEWV~~dRil~~~eeN~~~ 109 (136)
T 2k3y_A 87 KSSWDEWVGYDRIRAYNEENIAM 109 (136)
T ss_dssp CGGGCEEEETTTEEESCHHHHHH
T ss_pred CCcceeeecHhhhhhCCHhHhHH
Confidence 8532245889999999975 444
No 450
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=30.94 E-value=2.8e+02 Score=28.36 Aligned_cols=89 Identities=11% Similarity=-0.020 Sum_probs=57.2
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEe-CCCCcCCccCHHH
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYN-NTFVTNIDISVDT 593 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYN-iP~~TGv~LSpel 593 (786)
-|-+..+.......+..+++++.+.|..-|.++.+-+. .-.+..+.|++.+++.++.|+... +|. ...+++. .
T Consensus 116 ~~~~f~~~~~~~~~~~~~~~~l~~~g~~~vaii~~~~~----~g~~~~~~~~~~~~~~G~~v~~~~~~~~-~~~d~~~-~ 189 (379)
T 3n0w_A 116 NGYGIGFLYNFTSIVKTVVQAQLAKGYKTWFLMLPDAA----YGDLMNAAIRRELTAGGGQIVGSVRFPF-ETQDFSS-Y 189 (379)
T ss_dssp CSSEEECSCCHHHHHHHHHHHHHHTTCCEEEEEEESSH----HHHHHHHHHHHHHHHHTCEEEEEEEECT-TCCCCHH-H
T ss_pred CCcEEEEeCChHHHHHHHHHHHHHcCCcEEEEEecccc----hhHHHHHHHHHHHHHcCCEEEEEEeCCC-CCCCHHH-H
Confidence 34455566666667788899999999999998844321 135577888888887788776422 231 2345543 5
Q ss_pred HHHHH-hCCCEEEEEeC
Q psy11975 594 LVKLA-HHENIRGVKDT 609 (786)
Q Consensus 594 L~rLA-eiPNVVGIKDS 609 (786)
+.+|. .-|.++.+=..
T Consensus 190 l~~i~~~~~d~v~~~~~ 206 (379)
T 3n0w_A 190 LLQAKASGAQLIVSTSG 206 (379)
T ss_dssp HHHHHHHTCSEEEECCC
T ss_pred HHHHHHCCCCEEEEecc
Confidence 66665 46777766333
No 451
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=30.75 E-value=1.4e+02 Score=31.12 Aligned_cols=116 Identities=15% Similarity=0.081 Sum_probs=73.7
Q ss_pred HHHHHHHHHcCCCEEEEcCCCCC---CCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHH-------h
Q psy11975 530 IDLTQKAAKAGANAALILCPYYF---QKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLA-------H 599 (786)
Q Consensus 530 IELAr~Ae~aGADAVmViPPyY~---kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLA-------e 599 (786)
++-|..|++.|||.|=+..-... .|+ +..++.+.+.+++||++-=-|-..++.++.+.+..+. +
T Consensus 11 ~~~a~~A~~~GAdRIELc~~L~~GGlTPS------~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~ 84 (256)
T 1twd_A 11 MECALTAQQNGADRVELCAAPKEGGLTPS------LGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRE 84 (256)
T ss_dssp HHHHHHHHHTTCSEEEECBCGGGTCBCCC------HHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEcCCcccCCCCCC------HHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHH
Confidence 56678899999999988875432 243 3445666777899999888896667888877665543 2
Q ss_pred --C-CCEEEEEeC----CHHHHHHHHhhcCCCCEEEEeCCcch-----hhh-hhccCCccccccc
Q psy11975 600 --H-ENIRGVKDT----DNIKLANMANQTKDLNFSVFAGSAGY-----LLS-GLLVGCAGGINAL 651 (786)
Q Consensus 600 --i-PNVVGIKDS----Dl~ri~~ll~~~~~~df~Vf~G~Del-----LL~-aL~~GAdG~Isg~ 651 (786)
. .-|.|+=.. |...+.++++...+-.+.+=-..|.. .++ ...+|++-++++.
T Consensus 85 ~GadGvV~G~Lt~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~lG~~rILTSG 149 (256)
T 1twd_A 85 LGFPGLVTGVLDVDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAELGIARVLTSG 149 (256)
T ss_dssp TTCSEEEECCBCTTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHHTCCEEEECT
T ss_pred cCCCEEEEeeECCCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHcCCCEEECCC
Confidence 2 336666554 88999999874433333332333321 122 2346877776553
No 452
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=30.62 E-value=2e+02 Score=31.11 Aligned_cols=103 Identities=10% Similarity=0.070 Sum_probs=68.0
Q ss_pred CCCCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccC
Q psy11975 512 EWQADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDIS 590 (786)
Q Consensus 512 aGRVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LS 590 (786)
+.++++++=+ ++.+.++++++++..++.|++.+= .|+ . . ++.+++|.+++++||+.=. ...+
T Consensus 211 G~d~~l~vDaN~~~~~~~A~~~~~~L~~~~i~~iE-~P~-~---d------~~~~~~l~~~~~iPIa~dE------~~~~ 273 (409)
T 3go2_A 211 GPDVEILLDLNFNAKPEGYLKILRELADFDLFWVE-IDS-Y---S------PQGLAYVRNHSPHPISSCE------TLFG 273 (409)
T ss_dssp CTTSEEEEECTTCSCHHHHHHHHHHTTTSCCSEEE-CCC-S---C------HHHHHHHHHTCSSCEEECT------TCCH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHhhcCCeEEE-eCc-C---C------HHHHHHHHhhCCCCEEeCC------CcCC
Confidence 3456777633 456899999999999999998776 332 1 2 3457888888999998643 2345
Q ss_pred HHHHHHHHh--CCCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 591 VDTLVKLAH--HENIRGVKDT--DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 591 pelL~rLAe--iPNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
++.+.++.+ .-.++-+|-+ -+....++.+....-++.+..+
T Consensus 274 ~~~~~~~i~~~~~d~v~~k~~~GGit~~~~ia~~A~~~gi~~~~h 318 (409)
T 3go2_A 274 IREFKPFFDANAVDVAIVDTIWNGVWQSMKIAAFADAHDINVAPH 318 (409)
T ss_dssp HHHHHHHHHTTCCSEEEECHHHHCHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHhCCCCEEEeCCCCCCHHHHHHHHHHHHHcCCEEeec
Confidence 788888874 4578888887 5554444433111234555544
No 453
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=30.61 E-value=82 Score=32.32 Aligned_cols=52 Identities=2% Similarity=-0.125 Sum_probs=39.5
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCC--CCCCCCCHHHHHHHHHH
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPY--YFQKKMTEDLIYEHFIS 567 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPy--Y~kps~S~eeLv~YFra 567 (786)
.+|||++=|-.+.+++.++.+.. -|++++|+-.-. |..+..+-+++.+|.++
T Consensus 205 ~iPVIasGGi~s~ed~~~l~~~~--~G~~gvivg~al~l~~g~~~~~~~~~~~~~~ 258 (260)
T 2agk_A 205 DLKIVYAGGAKSVDDLKLVDELS--HGKVDLTFGSSLDIFGGNLVKFEDCCRWNEK 258 (260)
T ss_dssp SCEEEEESCCCCTHHHHHHHHHH--TTCEEEECCTTBGGGTCSSBCHHHHHHHHHH
T ss_pred CceEEEeCCCCCHHHHHHHHHhc--CCCCEEEeeCCHHHcCCCCCCHHHHHHHHHh
Confidence 68999987777888887776642 299999999985 65552368888888653
No 454
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=30.35 E-value=28 Score=37.01 Aligned_cols=55 Identities=20% Similarity=0.234 Sum_probs=37.2
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC--CC---CCC--CCCCHHHHHHHHHHHHhcCCCCEEEEe
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILC--PY---YFQ--KKMTEDLIYEHFISVADNSPIPVIIYN 580 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViP--Py---Y~k--ps~S~eeLv~YFraIAeAtdLPIiLYN 580 (786)
||.-|.. .++|+-|+++||.|||++- |. ++. ..+++ .+..++|-+++++|||-=.
T Consensus 14 vimdv~~------~eqa~iae~aGa~av~~l~~~p~d~r~~gGv~Rm~d---p~~I~~I~~aVsIPVm~k~ 75 (291)
T 3o07_A 14 VIMDVVT------PEQAKIAEKSGACAVMALESIPADMRKSGKVCRMSD---PKMIKDIMNSVSIPVMAKV 75 (291)
T ss_dssp EEEEESS------HHHHHHHHHHTCSEEEECSSCHHHHHTTTCCCCCCC---HHHHHHHHTTCSSCEEEEE
T ss_pred eeeecCC------HHHHHHHHHhCchhhhhccCCCchhhhcCCccccCC---HHHHHHHHHhCCCCeEEEE
Confidence 6665543 5788999999999999992 11 111 00111 4667888899999999654
No 455
>3rce_A Oligosaccharide transferase to N-glycosylate PROT; oligosaccharyltransferase, membrane protein, helical bundle, glycosylation, acceptor peptide, plasma membrane; HET: PPN; 3.40A {Campylobacter lari}
Probab=30.34 E-value=11 Score=44.77 Aligned_cols=30 Identities=7% Similarity=0.216 Sum_probs=14.3
Q ss_pred hhhhhhccCCCCCCCcccccccCCCCCCccccC
Q psy11975 169 TTFVKRLFSPPTPGSSKDFVESSSSPPTHRSYG 201 (786)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (786)
++|++-++--+-.. +-|-+--.+ |.-|-|-
T Consensus 680 S~~~Ql~~l~~yD~--~lFe~V~~~-~~akiy~ 709 (724)
T 3rce_A 680 SAYIQMFLLNQYDQ--DLFEQVTND-TRAKIYR 709 (724)
T ss_dssp BHHHHHTTSCCCCT--TTCCEEEEE-TTEEEEE
T ss_pred HHHHHHHhcCCCCh--hhhhhhhcC-CceEEEe
Confidence 45666655443211 133333333 6777775
No 456
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=30.28 E-value=91 Score=33.44 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=21.8
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALIL 547 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmVi 547 (786)
++|||+|... +.+.|+.|.++|||+|.+.
T Consensus 161 ~~~vi~g~v~-----t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 161 QHTIMAGNVV-----TGEMVEELILSGADIIKVG 189 (351)
T ss_dssp TSEEEEEEEC-----SHHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEEeCC-----CHHHHHHHHHhCCCEEEEC
Confidence 5788876432 2466788999999999874
No 457
>3aal_A Probable endonuclease 4; endoiv, DNA repair, base excision repair, TIM barrel, DNA DA endonuclease, hydrolase, metal-binding; 1.60A {Geobacillus kaustophilus} PDB: 1xp3_A
Probab=30.24 E-value=1e+02 Score=31.04 Aligned_cols=82 Identities=10% Similarity=-0.003 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCH---HHHHHHHHHHHhcC-CCCEEEEeCCCCcCCcc-CHHHHHHHHh-C
Q psy11975 527 RATIDLTQKAAKAGANAALILCPYYFQKKMTE---DLIYEHFISVADNS-PIPVIIYNNTFVTNIDI-SVDTLVKLAH-H 600 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViPPyY~kps~S~---eeLv~YFraIAeAt-dLPIiLYNiP~~TGv~L-SpelL~rLAe-i 600 (786)
+...+.++.|+++||..+.+.+.++.... .+ +.+++.++.+++.+ ++.|.+=|.|....... +++.+.+|.+ +
T Consensus 94 ~~~~~~i~~A~~lGa~~vv~h~g~~~~~~-~~~~~~~~~~~l~~l~~~a~gv~l~lEn~~~~~~~~~~t~~~~~~li~~v 172 (303)
T 3aal_A 94 DFLRAEIERTEAIGAKQLVLHPGAHVGAG-VEAGLRQIIRGLNEVLTREQNVQIALETMAGKGSECGRTFEELAYIIDGV 172 (303)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCEECTTSC-HHHHHHHHHHHHHHHCCSSCSCEEEEECCCCCTTEECSSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCCCC-HHHHHHHHHHHHHHHHHhCCCCEEEEecCCCCCCccCCCHHHHHHHHHhc
Confidence 34455677888999999988776543222 12 33566667776554 78888888875322222 8888888873 3
Q ss_pred ---CCEEEEEeC
Q psy11975 601 ---ENIRGVKDT 609 (786)
Q Consensus 601 ---PNVVGIKDS 609 (786)
|+|--.=|+
T Consensus 173 ~~~~~vg~~lD~ 184 (303)
T 3aal_A 173 AYNDKLSVCFDT 184 (303)
T ss_dssp TTGGGEEEEEEH
T ss_pred CCCCCEEEEEEc
Confidence 566555555
No 458
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=30.20 E-value=1.2e+02 Score=30.21 Aligned_cols=61 Identities=10% Similarity=0.163 Sum_probs=42.7
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF 583 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~ 583 (786)
..+++-....+.....+..+.+.+.++|++++.+.... .+...++.+ ...++|+++++...
T Consensus 33 ~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-------~~~~~~~~~-~~~~iPvV~~~~~~ 93 (313)
T 3m9w_A 33 AKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ-------VLSNVVKEA-KQEGIKVLAYDRMI 93 (313)
T ss_dssp CEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTT-------SCHHHHHHH-HTTTCEEEEESSCC
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh-------hhHHHHHHH-HHCCCeEEEECCcC
Confidence 34555455668888889999999999999999875321 122344444 34689999999753
No 459
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.15 E-value=13 Score=34.02 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=12.3
Q ss_pred CCCCCccccccccccccccccccccc
Q psy11975 226 HSKPLSRTMFGPVSRLCLKVTSRTLS 251 (786)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (786)
+..+-++++| |..|.-.++.++++
T Consensus 26 ~~~~ps~~Lf--VgNLp~~vte~dL~ 49 (119)
T 2ad9_A 26 SAGVPSRVIH--IRKLPIDVTEGEVI 49 (119)
T ss_dssp SCSSCCSEEE--EESCCTTCCHHHHH
T ss_pred ccCCCCCEEE--EeCCCCCCCHHHHH
Confidence 3445556655 44555555555543
No 460
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=30.13 E-value=56 Score=35.05 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=68.8
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.+++.+=+ ++.+.++++++++..++.|++.+ -.|+ .+. -.+.+++|.+++++||+.=. .-.+++
T Consensus 208 d~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~--~~~-----d~~~~~~l~~~~~iPI~~dE------~~~~~~ 272 (388)
T 2nql_A 208 QAKIAADMHWNQTPERALELIAEMQPFDPWFA--EAPV--WTE-----DIAGLEKVSKNTDVPIAVGE------EWRTHW 272 (388)
T ss_dssp TSEEEEECCSCSCHHHHHHHHHHHGGGCCSCE--ECCS--CTT-----CHHHHHHHHTSCCSCEEECT------TCCSHH
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHhhcCCCEE--ECCC--Chh-----hHHHHHHHHhhCCCCEEEeC------CcCCHH
Confidence 45666533 45689999999999999999865 3453 221 25778888888999988644 234688
Q ss_pred HHHHHHh--CCCEEEEEeC--CHHHHHHHHhhcCCCCEEEEeC
Q psy11975 593 TLVKLAH--HENIRGVKDT--DNIKLANMANQTKDLNFSVFAG 631 (786)
Q Consensus 593 lL~rLAe--iPNVVGIKDS--Dl~ri~~ll~~~~~~df~Vf~G 631 (786)
.+.++.+ .-+++.+|-. .+....++.+....-++.++.+
T Consensus 273 ~~~~~i~~~~~d~v~ik~~~GGit~~~~i~~~A~~~g~~~~~h 315 (388)
T 2nql_A 273 DMRARIERCRIAIVQPEMGHKGITNFIRIGALAAEHGIDVIPH 315 (388)
T ss_dssp HHHHHHTTSCCSEECCCHHHHCHHHHHHHHHHHHHHTCEECCC
T ss_pred HHHHHHHcCCCCEEEecCCCCCHHHHHHHHHHHHHcCCeEEee
Confidence 8999884 4688999887 6655444433111234565555
No 461
>1bwv_A Rubisco, protein (ribulose bisphosphate carboxylase); carbon dioxide fixation, complex (rubisco-reaction intermedi high specificity factor; HET: KCX CAP; 2.40A {Galdieria partita} SCOP: c.1.14.1 d.58.9.1 PDB: 1iwa_A 1bxn_A
Probab=30.06 E-value=62 Score=36.79 Aligned_cols=96 Identities=10% Similarity=-0.015 Sum_probs=57.5
Q ss_pred CCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCC-----CcC
Q psy11975 512 EWQADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTF-----VTN 586 (786)
Q Consensus 512 aGRVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~-----~TG 586 (786)
+.+.-..++|++.+.+|.++.|+.|.++|+.++|+-.-. ..+ .-..+.++++ ..++||.++-.-. ...
T Consensus 242 Ge~k~~~~NiTa~~~~eM~~Ra~~a~e~G~~~~mvd~~~--G~~-a~~~l~~~~r----~~~l~lh~HRAghga~~r~~~ 314 (493)
T 1bwv_A 242 GEVKGHYLNVTAATMEEMYARANFAKELGSVIIMIDLVI--GYT-AIQTMAKWAR----DNDMILHLHRAGNSTYSRQKN 314 (493)
T ss_dssp TSCCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEGGG--CHH-HHHHHHHHHH----HTTCEEEEECTTTHHHHSCTT
T ss_pred CCcceeeccCCCCCHHHHHHHHHHHHHhCCCeEEEeccc--ChH-HHHHHHHHHh----hcCcEEEecCCCcccccCCCC
Confidence 334445679999999999999999999999999987321 221 1222333333 3578877664311 012
Q ss_pred CccCHHHHHHHHh--------CCCEEEEEeC-CHHHHH
Q psy11975 587 IDISVDTLVKLAH--------HENIRGVKDT-DNIKLA 615 (786)
Q Consensus 587 v~LSpelL~rLAe--------iPNVVGIKDS-Dl~ri~ 615 (786)
..++..++.+|.+ .++++| |.. +.+...
T Consensus 315 hGis~~Vl~Kl~RLaGaD~ih~gt~~G-Kleg~~~~~~ 351 (493)
T 1bwv_A 315 HGMNFRVICKWMRMAGVDHIHAGTVVG-KLEGDPIITR 351 (493)
T ss_dssp SEECHHHHHHHHHHHTCSEEECCCSSS-SSCCCHHHHH
T ss_pred CCCcHHHHHHHHHHcCCCcccccCccC-ccCCCHHHHH
Confidence 2355555555542 356644 777 554433
No 462
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=29.96 E-value=36 Score=29.02 Aligned_cols=53 Identities=17% Similarity=0.194 Sum_probs=39.7
Q ss_pred CCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCccccccccccccccc
Q psy11975 355 LGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLSQ 412 (786)
Q Consensus 355 ~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFsE 412 (786)
.+|.+||=|.+|-.-==...|.|++.. ..++.|+|..+. -.||..++|+.+..
T Consensus 14 ~~~~~geDVL~rw~DG~fYLGtIVd~~--~~~ClV~FeD~S---~~Wv~~kdi~kl~~ 66 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDGRFYLGTIIDQT--SDQYLIRFDDQS---EQWCEPDKLRKLGG 66 (69)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEEEEC--SSCEEEEETTCC---EEEECTTTEECSSC
T ss_pred cccccCCeEEEEecCCCEEEEEEEecC--CceEEEEecCCc---ceeeeHHHHHhhcC
Confidence 689999999999766666788887644 467888876654 34578888887643
No 463
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=29.95 E-value=58 Score=35.26 Aligned_cols=48 Identities=13% Similarity=0.223 Sum_probs=37.0
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN 581 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi 581 (786)
+..||++.+..=.+-|||.|||=|-..| .+-.++|.+..++|+..||.
T Consensus 238 N~~EAlrE~~~Di~EGAD~vMVKPal~Y---------LDIir~vk~~~~~PvaaYqV 285 (337)
T 1w5q_A 238 NSDEALHEVAADLAEGADMVMVKPGMPY---------LDIVRRVKDEFRAPTFVYQV 285 (337)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESCGGG---------HHHHHHHHHHHCSCEEEEEC
T ss_pred ChHHHHHHHHhhHHhCCCEEEEcCCCch---------HHHHHHHHHhcCCCEEEEEc
Confidence 4578888887777789999999875432 35556777777999999995
No 464
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=29.93 E-value=3.2e+02 Score=28.94 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=0.0
Q ss_pred HHHHHHcCCCEEEEcCCCC-------CCCCCCHHHHHHHHHHHHhcC---CCCEEEEeCCCCcCCccCHHHHHHHH----
Q psy11975 533 TQKAAKAGANAALILCPYY-------FQKKMTEDLIYEHFISVADNS---PIPVIIYNNTFVTNIDISVDTLVKLA---- 598 (786)
Q Consensus 533 Ar~Ae~aGADAVmViPPyY-------~kps~S~eeLv~YFraIAeAt---dLPIiLYNiP~~TGv~LSpelL~rLA---- 598 (786)
++.|.++|+|.|-+..+.- ++-+ .++.++-+.++.+.+ ++.+.+|=.--......+++.+.+++
T Consensus 102 i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s--~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (337)
T 3ble_A 102 VDWIKDSGAKVLNLLTKGSLHHLEKQLGKT--PKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLS 179 (337)
T ss_dssp HHHHHHHTCCEEEEEEECSHHHHHHHTCCC--HHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCHHHHHHHhCCC--HHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHH
Q ss_pred hC-CCEEEEEeC-------CHHHHHHHHhhcC-CCCEEEEeCCc-----chhhhhhccCC---cccccccc----ccccH
Q psy11975 599 HH-ENIRGVKDT-------DNIKLANMANQTK-DLNFSVFAGSA-----GYLLSGLLVGC---AGGINALS----AVLGG 657 (786)
Q Consensus 599 ei-PNVVGIKDS-------Dl~ri~~ll~~~~-~~df~Vf~G~D-----elLL~aL~~GA---dG~Isg~a----N~~Pe 657 (786)
+. ...+.|+|+ ++.++-+.+++.. .-.+.+=+=+| ...+.++.+|+ ++.+.|++ |..-+
T Consensus 180 ~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG~~aGN~~~E 259 (337)
T 3ble_A 180 KEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGERAGNTPLE 259 (337)
T ss_dssp TSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSSTTCBCBHH
T ss_pred HcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEecccccccccchhHH
Q ss_pred HHHHHHHHH----HcCCHHHHHHHHHHhhhhH
Q psy11975 658 PICELYDLA----KAGKWEEAMKLQHRLVKPD 685 (786)
Q Consensus 658 l~vaL~eA~----~aGD~eeAreLQ~rL~pLi 685 (786)
.++.+++.. -.=|+++-.++-+.+..+.
T Consensus 260 ~lv~~L~~~~g~~tgidl~~L~~~~~~v~~~~ 291 (337)
T 3ble_A 260 ALVTTIHDKSNSKTNINEIAITEASRLVEVFS 291 (337)
T ss_dssp HHHHHHHHHSSCCCCCCGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCcCHHHHHHHHHHHHHHH
No 465
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=29.90 E-value=2.5e+02 Score=29.20 Aligned_cols=131 Identities=9% Similarity=0.076 Sum_probs=83.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcCCCCC--CCCCCHHHHHHHHHHHHhcC-CCC------EEEEeCCCC--cCCccCH
Q psy11975 523 HTTTRATIDLTQKAAKAGANAALILCPYYF--QKKMTEDLIYEHFISVADNS-PIP------VIIYNNTFV--TNIDISV 591 (786)
Q Consensus 523 a~ST~EAIELAr~Ae~aGADAVmViPPyY~--kps~S~eeLv~YFraIAeAt-dLP------IiLYNiP~~--TGv~LSp 591 (786)
+.+-+...+.+++|.+.|..-|+++--..- ..+.+.+.+.+-.+.+.+.. +.. ++.|.=... ||..-++
T Consensus 104 ~Etd~~v~~Kv~~Al~~GL~pI~CvGEtleere~g~t~~vv~~Ql~~~l~~~~~~~~~~~~vvIAYEPvWAIGTG~~Atp 183 (257)
T 2yc6_A 104 GETDEQSAKKAKRALEKGMTVIFCVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATP 183 (257)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHTTCHHHHHTEEEEECCGGGTTTSCCCCH
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEcCCcHHHHhcCCHHHHHHHHHHHHHhcCCChhhccCCEEEEECCHHHhCCCCCCCH
Confidence 456677788899999999999999864321 01112444555555555443 322 778874433 7878888
Q ss_pred HHHHHHHhCCCEEEEEeCCHHHHHHHHhhc----CCCCEEEEeCCc---chhhhhhcc-CCccccccccccccHHHHHHH
Q psy11975 592 DTLVKLAHHENIRGVKDTDNIKLANMANQT----KDLNFSVFAGSA---GYLLSGLLV-GCAGGINALSAVLGGPICELY 663 (786)
Q Consensus 592 elL~rLAeiPNVVGIKDSDl~ri~~ll~~~----~~~df~Vf~G~D---elLL~aL~~-GAdG~Isg~aN~~Pel~vaL~ 663 (786)
+.+.+.. ..+++.+... ...+++|+.|.. +...+.+.. +.||+..|.+.+-|+ +.+|+
T Consensus 184 e~aqevh-------------~~IR~~l~~~~~~~~a~~vrIlYGGSV~~~N~~~l~~~~diDG~LVGgAsL~a~-F~~Ii 249 (257)
T 2yc6_A 184 EQAEEVH-------------VGLRKWFVEKVAAEGAQHIRIIYGGSANGSNNEKLGQCPNIDGFLVGGASLKPE-FMTMI 249 (257)
T ss_dssp HHHHHHH-------------HHHHHHHHHHHHHHHHTTCEEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSTH-HHHHH
T ss_pred HHHHHHH-------------HHHHHHHHHhcChhhcccceEEEcCccCHHHHHHHHcCCCCCeeeecHHHHHHH-HHHHH
Confidence 8887775 2233332210 123677766653 234444544 899999999999999 99999
Q ss_pred HHHH
Q psy11975 664 DLAK 667 (786)
Q Consensus 664 eA~~ 667 (786)
++..
T Consensus 250 ~~~~ 253 (257)
T 2yc6_A 250 DILT 253 (257)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8754
No 466
>4dve_A Biotin transporter BIOY; ECF-transport, ligand-binding domain, biotin binding, membra transport protein; HET: BTN BNG; 2.09A {Lactococcus lactis subsp}
Probab=29.79 E-value=12 Score=37.71 Aligned_cols=13 Identities=8% Similarity=0.169 Sum_probs=7.8
Q ss_pred cCCccCHHHHHHH
Q psy11975 585 TNIDISVDTLVKL 597 (786)
Q Consensus 585 TGv~LSpelL~rL 597 (786)
+.++++.+++.-+
T Consensus 44 ~pVPiTlQtl~V~ 56 (198)
T 4dve_A 44 IPVPIILQNMGIM 56 (198)
T ss_dssp SSCCBCSTHHHHH
T ss_pred CCcCccHHHHHHH
Confidence 4556777766554
No 467
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=29.69 E-value=21 Score=32.47 Aligned_cols=60 Identities=10% Similarity=0.063 Sum_probs=45.0
Q ss_pred cCCCCCCCceEEEecc----cCCCCCccccCCCCC-------CCcEEEEEeCCCCCcc-cccccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVK----GYPSWPGKLISPAPT-------QGRVWVKWFGMSNEPL-SEVEPATLKSLSQG 413 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvk----G~PwWPg~V~~~~~~-------~g~~~V~fFG~~~~a~-s~V~~k~LkpFsEg 413 (786)
....|.+|+.|+..=. |--++.|+|++.... ...|.|.|-|=+. .| -||..+.|..|++.
T Consensus 16 ~~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~-rwDEWV~edRilk~~ee 87 (101)
T 3m9q_A 16 ETPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRP-SYDRAVRATVLLKDTEE 87 (101)
T ss_dssp CCCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCG-GGCEEECGGGEEECCHH
T ss_pred CCCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCc-CceeecCHHHcccCCHH
Confidence 3447999999999764 566789999985421 1379999999874 23 45899999999875
No 468
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=29.64 E-value=1.6e+02 Score=28.78 Aligned_cols=70 Identities=19% Similarity=0.171 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHcCCCEEEEcC--C-CC-CCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHhCC--
Q psy11975 528 ATIDLTQKAAKAGANAALILC--P-YY-FQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAHHE-- 601 (786)
Q Consensus 528 EAIELAr~Ae~aGADAVmViP--P-yY-~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAeiP-- 601 (786)
+.+++++.++++|++.++++. + .. ..+. .+.++++++.+++||+.= .| --+++.+.++.+..
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~------~~~~~~l~~~~~ipvia~-----GG-I~~~~d~~~~~~~~~~ 217 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLGGPN------LDLLAGVADRTDAPVIAS-----GG-VSSLDDLRAIATLTHR 217 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTSCCC------HHHHHHHHTTCSSCEEEE-----SC-CCSHHHHHHHHTTGGG
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccCCCC------HHHHHHHHHhCCCCEEEE-----CC-CCCHHHHHHHHhhccC
Confidence 567888888888999888765 2 11 1222 456677777777887642 22 23467777777542
Q ss_pred CEEEEEeC
Q psy11975 602 NIRGVKDT 609 (786)
Q Consensus 602 NVVGIKDS 609 (786)
++-|+=-.
T Consensus 218 Gad~v~vG 225 (244)
T 2y88_A 218 GVEGAIVG 225 (244)
T ss_dssp TEEEEEEC
T ss_pred CCCEEEEc
Confidence 55555443
No 469
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=29.59 E-value=1.1e+02 Score=33.56 Aligned_cols=28 Identities=18% Similarity=0.242 Sum_probs=21.0
Q ss_pred CCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEE
Q psy11975 514 QADLLKPQKHTTTRATIDLTQKAAKAGANAALI 546 (786)
Q Consensus 514 RVPVIaGVGa~ST~EAIELAr~Ae~aGADAVmV 546 (786)
.+|||+|... +.+.|+.++++|||+|.+
T Consensus 184 ~i~Vi~g~V~-----t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 184 NIDVIVGNVV-----TEEATKELIENGADGIKV 211 (400)
T ss_dssp CCEEEEEEEC-----SHHHHHHHHHTTCSEEEE
T ss_pred CCeEEEeecC-----CHHHHHHHHHcCCCEEEE
Confidence 5789974222 256678888999999998
No 470
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=29.58 E-value=55 Score=35.19 Aligned_cols=91 Identities=10% Similarity=-0.103 Sum_probs=63.7
Q ss_pred CCeEEEeC-CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHH
Q psy11975 514 QADLLKPQ-KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVD 592 (786)
Q Consensus 514 RVPVIaGV-Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpe 592 (786)
.+++.+-+ ++.+.++++++++..++.|++.+ --|.. +. -++.+++|.+++++||+.=. .-.+++
T Consensus 210 ~~~l~vDan~~~~~~~a~~~~~~l~~~~i~~i--EqP~~--~~-----d~~~~~~l~~~~~iPIa~dE------~~~~~~ 274 (392)
T 1tzz_A 210 DAQLAVDANGRFNLETGIAYAKMLRDYPLFWY--EEVGD--PL-----DYALQAALAEFYPGPMATGE------NLFSHQ 274 (392)
T ss_dssp TCEEEEECTTCCCHHHHHHHHHHHTTSCCSEE--ECCSC--TT-----CHHHHHHHTTTCCSCEEECT------TCCSHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHcCCCee--cCCCC--hh-----hHHHHHHHHhhCCCCEEECC------CCCCHH
Confidence 45666633 45689999999999999998853 44531 21 25778888888899988744 235678
Q ss_pred HHHHHHh------CCCEEEEEeC---CHHHHHHHHh
Q psy11975 593 TLVKLAH------HENIRGVKDT---DNIKLANMAN 619 (786)
Q Consensus 593 lL~rLAe------iPNVVGIKDS---Dl~ri~~ll~ 619 (786)
.+.++.+ .-+++-+|-. .+....++.+
T Consensus 275 ~~~~~i~~~~~~~~~d~v~ik~~~~GGit~~~~i~~ 310 (392)
T 1tzz_A 275 DARNLLRYGGMRPDRDWLQFDCALSYGLCEYQRTLE 310 (392)
T ss_dssp HHHHHHHHSCCCTTTCEECCCTTTTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCccCCcEEEECccccCCHHHHHHHHH
Confidence 8888874 4689999988 5655555443
No 471
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.58 E-value=28 Score=29.56 Aligned_cols=56 Identities=14% Similarity=-0.037 Sum_probs=42.0
Q ss_pred cCCCCCCCceEEEecccCCCCCccccCCCCCCCcEEEEEeCCCCCcccccccccccccc
Q psy11975 353 KLLGLAEGDLVWGSVKGYPSWPGKLISPAPTQGRVWVKWFGMSNEPLSEVEPATLKSLS 411 (786)
Q Consensus 353 ~~~~f~vGDLVWaKvkG~PwWPg~V~~~~~~~g~~~V~fFG~~~~a~s~V~~k~LkpFs 411 (786)
...+|.+|+=|.+.-+===..||.|........+..|+|+.+. -.|+..++|+++.
T Consensus 6 ~~~~f~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~s---~~wv~~kdi~~~~ 61 (68)
T 2e5p_A 6 SGPRLWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDS---QFLVLWKDISPAA 61 (68)
T ss_dssp CCCCCCTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTTE---EEEEETTTEECCC
T ss_pred CCcccccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccCC---eeeeeeecccccc
Confidence 3468999999998766555678999887766678889987664 3456778888753
No 472
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=29.56 E-value=1.5e+02 Score=28.57 Aligned_cols=61 Identities=11% Similarity=0.128 Sum_probs=0.0
Q ss_pred CCeEEEeC--CCCCHHHHHHHHHHHHHcC-CCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 514 QADLLKPQ--KHTTTRATIDLTQKAAKAG-ANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 514 RVPVIaGV--Ga~ST~EAIELAr~Ae~aG-ADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
+..+++.. ...+.+...+..+.+.+.| +|++++.+....... ..++.+.++ ++|+++++.+
T Consensus 30 g~~~~~~~~~~~~~~~~~~~~i~~l~~~~~vdgii~~~~~~~~~~-------~~~~~~~~~-~ipvV~~~~~ 93 (276)
T 3ksm_A 30 GVTLLHRSTKDDGDIAGQIQILSYHLSQAPPDALILAPNSAEDLT-------PSVAQYRAR-NIPVLVVDSD 93 (276)
T ss_dssp TCEEEECCCSSTTCHHHHHHHHHHHHHHSCCSEEEECCSSTTTTH-------HHHHHHHHT-TCCEEEESSC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCCCHHHHH-------HHHHHHHHC-CCcEEEEecC
No 473
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=29.49 E-value=2.4e+02 Score=27.47 Aligned_cols=76 Identities=7% Similarity=-0.099 Sum_probs=52.6
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeC-CCCcCCccCHHHHHHHHh--C
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNN-TFVTNIDISVDTLVKLAH--H 600 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNi-P~~TGv~LSpelL~rLAe--i 600 (786)
.+.+...+.++.|+++|+..|.+.|. . +.++...++|+..++.+.+.|. |..+ .--+++.+.+|.+ .
T Consensus 86 ~~~~~~~~~i~~A~~lGa~~v~~~p~--------~-~~l~~l~~~a~~~gv~l~lEn~~~~~~-~~~~~~~~~~ll~~~~ 155 (257)
T 3lmz_A 86 KSEEEIDRAFDYAKRVGVKLIVGVPN--------Y-ELLPYVDKKVKEYDFHYAIHLHGPDIK-TYPDATDVWVHTKDLD 155 (257)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEEEEC--------G-GGHHHHHHHHHHHTCEEEEECCCTTCS-SSCSHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEecCC--------H-HHHHHHHHHHHHcCCEEEEecCCCccc-ccCCHHHHHHHHHhCC
Confidence 56788888999999999999997532 1 2344555666667899999998 4322 2236788888874 4
Q ss_pred CCEEEEEeC
Q psy11975 601 ENIRGVKDT 609 (786)
Q Consensus 601 PNVVGIKDS 609 (786)
|+|.-.=|.
T Consensus 156 p~vg~~~D~ 164 (257)
T 3lmz_A 156 PRIGMCLDV 164 (257)
T ss_dssp TTEEEEEEH
T ss_pred CCccEEEch
Confidence 776555554
No 474
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=29.39 E-value=89 Score=33.91 Aligned_cols=50 Identities=8% Similarity=0.248 Sum_probs=39.3
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEEeCC
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIYNNT 582 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLYNiP 582 (786)
.+.+||++.+..=.+-|||.|||=|-..| .+-.++|.+.. ++|+..||.-
T Consensus 240 aN~~EAlre~~~Di~EGAD~vMVKPal~Y---------LDIi~~vk~~~p~~P~aaYqVS 290 (342)
T 1h7n_A 240 AGRGLARRALERDMSEGADGIIVKPSTFY---------LDIMRDASEICKDLPICAYHVS 290 (342)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEESSGGG---------HHHHHHHHHHTTTSCEEEEECH
T ss_pred CCHHHHHHHHHhhHHhCCCeEEEecCccH---------HHHHHHHHHhccCCCeEEEEcC
Confidence 35788888888777789999999875432 35566888888 8999999953
No 475
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=29.35 E-value=1.6e+02 Score=31.23 Aligned_cols=55 Identities=9% Similarity=-0.045 Sum_probs=39.5
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEE
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVIIY 579 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiLY 579 (786)
...+.+..+++++.+.++||+.|.+.--.-. .+++++.+.++.|.+.+ ++||-++
T Consensus 144 ~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~---~~P~~v~~lv~~l~~~~~~~~pi~~H 200 (345)
T 1nvm_A 144 HMIPAEKLAEQGKLMESYGATCIYMADSGGA---MSMNDIRDRMRAFKAVLKPETQVGMH 200 (345)
T ss_dssp TSSCHHHHHHHHHHHHHHTCSEEEEECTTCC---CCHHHHHHHHHHHHHHSCTTSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCc---cCHHHHHHHHHHHHHhcCCCceEEEE
Confidence 4456777888888888888887777654322 24788888888888887 6777763
No 476
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=29.34 E-value=12 Score=41.32 Aligned_cols=20 Identities=35% Similarity=0.737 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCccccccc
Q psy11975 204 HHHSHHHRSHSHHHHQSQSK 223 (786)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~ 223 (786)
|||+|||++|......+..+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~ 21 (500)
T 3tcm_A 2 HHHHHHHHHHGTDDDDKMAA 21 (500)
T ss_dssp -------------------C
T ss_pred CccccccccCCCCCCCCccc
No 477
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=29.31 E-value=2.1e+02 Score=28.32 Aligned_cols=83 Identities=18% Similarity=0.174 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHcCCCEEEE-cCCCC---CCCCCCH----HHHHHHHHHHHhc---CCCCEEEEeCCCCcC-CccCHHHH
Q psy11975 527 RATIDLTQKAAKAGANAALI-LCPYY---FQKKMTE----DLIYEHFISVADN---SPIPVIIYNNTFVTN-IDISVDTL 594 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmV-iPPyY---~kps~S~----eeLv~YFraIAeA---tdLPIiLYNiP~~TG-v~LSpelL 594 (786)
+...+.++.|+++|+..|.+ +.+.+ +....+. +.+++.++.+++. .++.|.+-|.+...+ ..-+++.+
T Consensus 88 ~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~ 167 (294)
T 3vni_A 88 AFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEG 167 (294)
T ss_dssp HHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHH
T ss_pred HHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHH
Confidence 34456788888999999974 32222 2211122 3456666666654 479999998864322 22367788
Q ss_pred HHHHh---CCCEEEEEeC
Q psy11975 595 VKLAH---HENIRGVKDT 609 (786)
Q Consensus 595 ~rLAe---iPNVVGIKDS 609 (786)
.+|.+ .|||.-.=|.
T Consensus 168 ~~l~~~v~~~~vg~~~D~ 185 (294)
T 3vni_A 168 VDFVKQVDHNNVKVMLDT 185 (294)
T ss_dssp HHHHHHHCCTTEEEEEEH
T ss_pred HHHHHHcCCCCEEEEEEh
Confidence 88873 5786666665
No 478
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=29.29 E-value=1.1e+02 Score=31.68 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEE
Q psy11975 524 TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS-PIPVIIY 579 (786)
Q Consensus 524 ~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt-dLPIiLY 579 (786)
.+.+..+++++.+.++|||.+.+.--.- . ++++++.+.++.+.+.. ++||-++
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G-~--~~P~~~~~lv~~l~~~~~~~~i~~H 206 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIG-V--GTPGIMKDMLSAVMQEVPLAALAVH 206 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTS-C--CCHHHHHHHHHHHHHHSCGGGEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC-C--cCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 4677788888888888888776664332 1 24777777777777776 3666654
No 479
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=29.25 E-value=90 Score=32.47 Aligned_cols=59 Identities=8% Similarity=0.008 Sum_probs=46.6
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEEe
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVIIYN 580 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiLYN 580 (786)
+..+.+...+++++..+.|+|++++.--.--.+.++.+|-.+..+.+.+++ .+||+.--
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv 79 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV 79 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 356788889999999999999999886543333356999999999999887 38988653
No 480
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=29.25 E-value=79 Score=33.66 Aligned_cols=88 Identities=11% Similarity=0.122 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHcCCCEEEEcC----CCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHHHh-CC
Q psy11975 527 RATIDLTQKAAKAGANAALILC----PYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKLAH-HE 601 (786)
Q Consensus 527 ~EAIELAr~Ae~aGADAVmViP----PyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rLAe-iP 601 (786)
++++++|+...+.|||-|-|-. |-... .+.++..+..+.|.+++++||.|+|. ......++.+.+-++ ..
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~--vs~eee~~vV~~v~~~~~vplsI~DT---~~~~~~~~V~eaal~aga 148 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQN--RSGAELAEVCKAVADAIDVPLMIIGC---GVEEKDAEIFPVIGEALS 148 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTC--CCHHHHHHHHHHHHHHCSSCEEEECC---SCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCC--CCHHHHHHHHHHHHHhCCceEEEECC---CCCCCCHHHHHHHHHhCC
Confidence 5788999999999999998876 43322 35888888999999999999999873 011244677766654 22
Q ss_pred C---EEEEEeC-CHHHHHHHHh
Q psy11975 602 N---IRGVKDT-DNIKLANMAN 619 (786)
Q Consensus 602 N---VVGIKDS-Dl~ri~~ll~ 619 (786)
. ++.==.. +...+..+..
T Consensus 149 ~~k~iINdvs~~~~~~~~~~aa 170 (310)
T 2h9a_B 149 GRNCLLSSATKDNYKPIVATCM 170 (310)
T ss_dssp TSCCEEEEECTTTHHHHHHHHH
T ss_pred CCCCEEEECCCCccHHHHHHHH
Confidence 2 3322222 5555555554
No 481
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=29.24 E-value=1.2e+02 Score=29.74 Aligned_cols=59 Identities=15% Similarity=0.119 Sum_probs=39.7
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
.+++.....+.....+..+.+.+.++|++++.+... +.....++.+. ..++|+++++.+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~vdgiii~~~~~-------~~~~~~~~~~~-~~~iPvV~~~~~ 93 (309)
T 2fvy_A 35 QLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDP-------AAAGTVIEKAR-GQNVPVVFFNKE 93 (309)
T ss_dssp EEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSG-------GGHHHHHHHHH-TTTCCEEEESSC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCCc-------chhHHHHHHHH-HCCCcEEEecCC
Confidence 455544555777778888888889999999976431 11223344443 468999999975
No 482
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=29.18 E-value=3.9e+02 Score=27.16 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=70.6
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHH
Q psy11975 516 DLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLV 595 (786)
Q Consensus 516 PVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~ 595 (786)
+||+=+-..+.++++++++.+.+.|++.+-+. +..+. -.+.++++.++.+-.++-. |.-++.+.+.
T Consensus 35 ~vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt---~~t~~-----a~e~I~~l~~~~~~~~iGa------GTVlt~~~a~ 100 (232)
T 4e38_A 35 KVIPVIAIDNAEDIIPLGKVLAENGLPAAEIT---FRSDA-----AVEAIRLLRQAQPEMLIGA------GTILNGEQAL 100 (232)
T ss_dssp CEEEEECCSSGGGHHHHHHHHHHTTCCEEEEE---TTSTT-----HHHHHHHHHHHCTTCEEEE------ECCCSHHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHCCCCEEEEe---CCCCC-----HHHHHHHHHHhCCCCEEeE------CCcCCHHHHH
Confidence 34444446677999999999999999999985 32333 3466666777664334432 4467888887
Q ss_pred HHHhC-CCEEEEEeCCHHHHHHHHhhcCCCCEEEEeCCcc--hhhhhhccCCccc
Q psy11975 596 KLAHH-ENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAG--YLLSGLLVGCAGG 647 (786)
Q Consensus 596 rLAei-PNVVGIKDSDl~ri~~ll~~~~~~df~Vf~G~De--lLL~aL~~GAdG~ 647 (786)
...+. -.++-.=..|.+-+..+.+ . ++.++.|-.. -+..++.+|++-+
T Consensus 101 ~Ai~AGA~fIvsP~~~~~vi~~~~~-~---gi~~ipGv~TptEi~~A~~~Gad~v 151 (232)
T 4e38_A 101 AAKEAGATFVVSPGFNPNTVRACQE-I---GIDIVPGVNNPSTVEAALEMGLTTL 151 (232)
T ss_dssp HHHHHTCSEEECSSCCHHHHHHHHH-H---TCEEECEECSHHHHHHHHHTTCCEE
T ss_pred HHHHcCCCEEEeCCCCHHHHHHHHH-c---CCCEEcCCCCHHHHHHHHHcCCCEE
Confidence 77642 2233211115555544443 1 5666666543 3677888999855
No 483
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=29.15 E-value=1e+02 Score=32.18 Aligned_cols=58 Identities=10% Similarity=0.006 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEE
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVIIY 579 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiLY 579 (786)
+..+.+...+++++..+.|+|++++.--.--.+.++.+|-.+..+.+.+++ .+||+.-
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 91 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAG 91 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEec
Confidence 356788889999999999999999886544344467999888888888776 4888754
No 484
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=28.97 E-value=1.6e+02 Score=28.72 Aligned_cols=125 Identities=11% Similarity=0.046 Sum_probs=61.0
Q ss_pred CeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHH
Q psy11975 515 ADLLKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTL 594 (786)
Q Consensus 515 VPVIaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL 594 (786)
.|+.+++.-+... +.++.|.++|||+|.+..-.. ++ +.+.++.+.+.+ .++.+++=-.|.. +.+.+
T Consensus 69 ~~~~v~l~vnd~~---~~v~~~~~~Gad~v~vh~~~~--~~---~~~~~~~~~~~~-~g~~ig~~~~p~t-----~~e~~ 134 (230)
T 1rpx_A 69 LPLDVHLMIVEPD---QRVPDFIKAGADIVSVHCEQS--ST---IHLHRTINQIKS-LGAKAGVVLNPGT-----PLTAI 134 (230)
T ss_dssp SCEEEEEESSSHH---HHHHHHHHTTCSEEEEECSTT--TC---SCHHHHHHHHHH-TTSEEEEEECTTC-----CGGGG
T ss_pred CcEEEEEEecCHH---HHHHHHHHcCCCEEEEEecCc--cc---hhHHHHHHHHHH-cCCcEEEEeCCCC-----CHHHH
Confidence 4666666665544 566667789999997664200 11 123344444433 3555554444541 12233
Q ss_pred HHHHh-C---------CCEEEEEeC--CHHHHHHHHhhc--CCCC--EEEEeCCc-chhhhhhccCCccccccccc
Q psy11975 595 VKLAH-H---------ENIRGVKDT--DNIKLANMANQT--KDLN--FSVFAGSA-GYLLSGLLVGCAGGINALSA 653 (786)
Q Consensus 595 ~rLAe-i---------PNVVGIKDS--Dl~ri~~ll~~~--~~~d--f~Vf~G~D-elLL~aL~~GAdG~Isg~aN 653 (786)
..+.. . |.+-|.+.. .+..+.++.+.. .+.+ +.+-.|-. +.....+.+|++|++.|.+-
T Consensus 135 ~~~~~~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI~~~n~~~~~~aGad~vvvgSaI 210 (230)
T 1rpx_A 135 EYVLDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAV 210 (230)
T ss_dssp TTTTTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHH
T ss_pred HHHHhhCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHcCCCEEEEChhh
Confidence 33322 1 222232222 233444433311 1113 33444444 33556677899999999763
No 485
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=28.90 E-value=12 Score=40.22 Aligned_cols=14 Identities=57% Similarity=1.111 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCC
Q psy11975 200 YGRSHHHSHHHRSH 213 (786)
Q Consensus 200 ~~~~~~~~~~~~~~ 213 (786)
|=..|||+|||++|
T Consensus 301 ~~~~~~~~~~~~~~ 314 (314)
T 3tr9_A 301 YFQGHHHHHHHHHH 314 (314)
T ss_dssp --------------
T ss_pred hcccccccccccCC
No 486
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=28.88 E-value=12 Score=33.21 Aligned_cols=10 Identities=70% Similarity=1.175 Sum_probs=0.4
Q ss_pred cCCCCCCCCC
Q psy11975 200 YGRSHHHSHH 209 (786)
Q Consensus 200 ~~~~~~~~~~ 209 (786)
-+|+|||.||
T Consensus 130 ~~~~~~~~~~ 139 (139)
T 1pko_A 130 RSRSHHHHHH 139 (139)
T ss_dssp C---------
T ss_pred ccccccccCC
Confidence 4677776543
No 487
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=28.82 E-value=12 Score=35.85 Aligned_cols=8 Identities=0% Similarity=-0.002 Sum_probs=3.7
Q ss_pred eEEEEEee
Q psy11975 272 RLCLKVTS 279 (786)
Q Consensus 272 ~~~~~~~~ 279 (786)
+|--||++
T Consensus 47 riVGkV~~ 54 (142)
T 2pi2_E 47 CFVGRLEK 54 (142)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEeE
Confidence 34445554
No 488
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=28.64 E-value=94 Score=32.35 Aligned_cols=58 Identities=12% Similarity=0.057 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcC--CCCEEEE
Q psy11975 522 KHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNS--PIPVIIY 579 (786)
Q Consensus 522 Ga~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAt--dLPIiLY 579 (786)
+..+.+...+++++..+.|+|++++.--.--.+.++.+|-.+..+.+.+++ .+||++-
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG 82 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAG 82 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEe
Confidence 356788899999999999999999986544334467999889998888876 4899883
No 489
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=28.61 E-value=57 Score=35.16 Aligned_cols=49 Identities=14% Similarity=0.252 Sum_probs=37.1
Q ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 525 TTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 525 ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
+..||++.+..=.+-|||.|||=|-..| .+-.++|.+..++|+..||.-
T Consensus 231 N~~EAlrE~~~Di~EGAD~vMVKPal~Y---------LDIir~vk~~~~~P~aaYqVS 279 (328)
T 1w1z_A 231 NTEEAMKEVELDIVEGADIVMVKPGLAY---------LDIVWRTKERFDVPVAIYHVS 279 (328)
T ss_dssp CSHHHHHHHHHHHHHTCSEEEEESCGGG---------HHHHHHHHHHHCSCEEEEECH
T ss_pred CHHHHHHHHHhhHHhCCCEEEEcCCCch---------HHHHHHHHHhcCCCEEEEEcc
Confidence 4578888777777779999999875432 355567777779999999953
No 490
>3cpt_A Mitogen-activated protein kinase kinase 1- interacting protein 1; scaffold, complex, alpha/beta, endosome, membrane, lysosome; 1.90A {Homo sapiens} SCOP: d.110.7.1 PDB: 1sko_A 2zl1_A 1vet_A 1veu_A
Probab=28.57 E-value=12 Score=36.02 Aligned_cols=9 Identities=22% Similarity=0.320 Sum_probs=4.8
Q ss_pred EEEEEeCCC
Q psy11975 387 VWVKWFGMS 395 (786)
Q Consensus 387 ~~V~fFG~~ 395 (786)
+.|-|.++.
T Consensus 107 lvit~Ias~ 115 (143)
T 3cpt_A 107 LVVSFIASS 115 (143)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEecC
Confidence 445555554
No 491
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=28.48 E-value=13 Score=38.97 Aligned_cols=20 Identities=45% Similarity=0.810 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCccccccc
Q psy11975 204 HHHSHHHRSHSHHHHQSQSK 223 (786)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~ 223 (786)
|||.|||+.||..|-..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~ 22 (301)
T 2j6v_A 3 HHHHHHHHHHSSGHIEGRHM 22 (301)
T ss_dssp ----------------CCCS
T ss_pred cccccccccccCCCCCCCCe
No 492
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=28.47 E-value=35 Score=32.73 Aligned_cols=57 Identities=18% Similarity=0.170 Sum_probs=0.0
Q ss_pred EEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC--CCCCCCCCCHHHHHHHHHHHHhcCCCCEEE
Q psy11975 517 LLKPQKHTTTRATIDLTQKAAKAGANAALILC--PYYFQKKMTEDLIYEHFISVADNSPIPVII 578 (786)
Q Consensus 517 VIaGVGa~ST~EAIELAr~Ae~aGADAVmViP--PyY~kps~S~eeLv~YFraIAeAtdLPIiL 578 (786)
+++++...+..+ ++.+.+.|+|.+++.+ |-..++. ....-.++++++.+..++||++
T Consensus 109 ~~~~v~~~t~~e----~~~~~~~g~d~i~~~~~~~~~~~~~-~~~~~~~~l~~l~~~~~~pvia 167 (215)
T 1xi3_A 109 LIIGASVYSLEE----ALEAEKKGADYLGAGSVFPTKTKED-ARVIGLEGLRKIVESVKIPVVA 167 (215)
T ss_dssp SEEEEEESSHHH----HHHHHHHTCSEEEEECSSCC----C-CCCCHHHHHHHHHHHCSSCEEE
T ss_pred CEEEEecCCHHH----HHHHHhcCCCEEEEcCCccCCCCCC-CCCcCHHHHHHHHHhCCCCEEE
No 493
>1nwa_A Peptide methionine sulfoxide reductase MSRA; oxidoreductase, product complex, structural genomics, PSI, protein structure initiative; 1.50A {Mycobacterium tuberculosis} SCOP: d.58.28.1
Probab=28.45 E-value=12 Score=37.89 Aligned_cols=14 Identities=64% Similarity=1.160 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCc
Q psy11975 204 HHHSHHHRSHSHHH 217 (786)
Q Consensus 204 ~~~~~~~~~~~~~~ 217 (786)
|||.|||..||..|
T Consensus 3 ~~~~~~~~~~~~~~ 16 (203)
T 1nwa_A 3 HHHHHHHHHHSSGH 16 (203)
T ss_dssp --------------
T ss_pred cccccccccccccc
No 494
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=28.41 E-value=1e+02 Score=30.63 Aligned_cols=76 Identities=11% Similarity=-0.034 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCCC---------------CCCCHHHHHHHHHHHHhcC---CCCEEEEeCCCCcCC
Q psy11975 526 TRATIDLTQKAAKAGANAALILCPYYFQ---------------KKMTEDLIYEHFISVADNS---PIPVIIYNNTFVTNI 587 (786)
Q Consensus 526 T~EAIELAr~Ae~aGADAVmViPPyY~k---------------ps~S~eeLv~YFraIAeAt---dLPIiLYNiP~~TGv 587 (786)
.+...+.++.|+++||..|.+.+..++. .....+.+++.++.+++.+ ++.|.+-|.+. ..
T Consensus 89 ~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~--~~ 166 (301)
T 3cny_A 89 SEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMG--TG 166 (301)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTT--SS
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCC--cc
Q ss_pred ccCHHHHHHHH---hCCCE
Q psy11975 588 DISVDTLVKLA---HHENI 603 (786)
Q Consensus 588 ~LSpelL~rLA---eiPNV 603 (786)
.-+++.+.+|+ ..|||
T Consensus 167 ~~~~~~~~~l~~~~~~~~v 185 (301)
T 3cny_A 167 IQTKEETDRLMANTDPKLV 185 (301)
T ss_dssp SCSHHHHHHHHHTSCTTTC
T ss_pred cCCHHHHHHHHHhCCccce
No 495
>3u61_A DNA polymerase accessory protein 62; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_A* 3u60_A*
Probab=28.32 E-value=13 Score=37.63 Aligned_cols=14 Identities=57% Similarity=1.210 Sum_probs=0.0
Q ss_pred cCCCCCCCCCCCCC
Q psy11975 200 YGRSHHHSHHHRSH 213 (786)
Q Consensus 200 ~~~~~~~~~~~~~~ 213 (786)
+|-.|||.|||+.|
T Consensus 186 ~~~~~~~~~~~~~~ 199 (199)
T 3u61_A 186 WGLEHHHHHHHHHH 199 (199)
T ss_dssp C-------------
T ss_pred HhhhhhccccccCC
No 496
>3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} SCOP: c.71.1.0 PDB: 3tq9_A* 3tqa_A* 3tqb_A*
Probab=28.32 E-value=18 Score=35.61 Aligned_cols=16 Identities=50% Similarity=0.935 Sum_probs=0.0
Q ss_pred cccCCCCCCCCCCCCC
Q psy11975 198 RSYGRSHHHSHHHRSH 213 (786)
Q Consensus 198 ~~~~~~~~~~~~~~~~ 213 (786)
.+|=..|||.|||+.|
T Consensus 163 ~~~~~~~~~~~~~~~~ 178 (178)
T 3tq8_A 163 NLYFQGHHHHHHHHHH 178 (178)
T ss_dssp CTTTCCCSCCC-----
T ss_pred ccccccccccccccCC
No 497
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=28.22 E-value=15 Score=41.23 Aligned_cols=39 Identities=31% Similarity=0.468 Sum_probs=0.0
Q ss_pred CCCCCCCCcccccccccCCCCCccccccccccccccccccccc
Q psy11975 209 HHRSHSHHHHQSQSKHHHSKPLSRTMFGPVSRLCLKVTSRTLS 251 (786)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (786)
||++|+||||.|. |-+-+++-|---+.++..+-..++|+
T Consensus 3 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 41 (580)
T 3etc_A 3 HHHHHHHHHHSSG----HIDDDDKHMTSLLSQFVSKTDFESYE 41 (580)
T ss_dssp ---------------------------CCGGGGBSCSCCSSHH
T ss_pred ccccccccccccC----CcCchHHHHHHHHHHHhhcccccCHH
No 498
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=28.16 E-value=36 Score=34.40 Aligned_cols=125 Identities=12% Similarity=0.055 Sum_probs=0.0
Q ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCCccCHHHHHHH
Q psy11975 518 LKPQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNIDISVDTLVKL 597 (786)
Q Consensus 518 IaGVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv~LSpelL~rL 597 (786)
++.+....+.+..+.++.+.+.|+.+.+.+.|..-. +.++.+.+..+.=+++=-+|+..|..+.++.+.++
T Consensus 90 ~itvH~Ea~~~~~~~i~~i~~~G~k~gval~p~t~~---------e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~~l~ki 160 (228)
T 3ovp_A 90 QYTFHLEATENPGALIKDIRENGMKVGLAIKPGTSV---------EYLAPWANQIDMALVMTVEPGFGGQKFMEDMMPKV 160 (228)
T ss_dssp EEEEEGGGCSCHHHHHHHHHHTTCEEEEEECTTSCG---------GGTGGGGGGCSEEEEESSCTTTCSCCCCGGGHHHH
T ss_pred EEEEccCCchhHHHHHHHHHHcCCCEEEEEcCCCCH---------HHHHHHhccCCeEEEeeecCCCCCcccCHHHHHHH
Q ss_pred HhCCCEEEEEeCCHHHHHHHHhhcCCCCEEEEeCCcch-hhhhhccCCccccccccccccHHHHHHHHHHHc
Q psy11975 598 AHHENIRGVKDTDNIKLANMANQTKDLNFSVFAGSAGY-LLSGLLVGCAGGINALSAVLGGPICELYDLAKA 668 (786)
Q Consensus 598 AeiPNVVGIKDSDl~ri~~ll~~~~~~df~Vf~G~Del-LL~aL~~GAdG~Isg~aN~~Pel~vaL~eA~~a 668 (786)
.++.+...+-.+.|=.|-... .-.+..+|+++++.|.+-+-.+-..+.++.+++
T Consensus 161 -----------------~~lr~~~~~~~I~VdGGI~~~t~~~~~~aGAd~~VvGsaIf~a~dp~~~~~~l~~ 215 (228)
T 3ovp_A 161 -----------------HWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRN 215 (228)
T ss_dssp -----------------HHHHHHCTTCEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTCSCHHHHHHHHHH
T ss_pred -----------------HHHHHhcCCCCEEEeCCcCHHHHHHHHHcCCCEEEEeHHHhCCCCHHHHHHHHHH
No 499
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=28.10 E-value=1.1e+02 Score=32.55 Aligned_cols=109 Identities=9% Similarity=0.046 Sum_probs=0.0
Q ss_pred cccCCCCeEEE-eCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCCCCcCC
Q psy11975 509 SEREWQADLLK-PQKHTTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNTFVTNI 587 (786)
Q Consensus 509 eevaGRVPVIa-GVGa~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP~~TGv 587 (786)
++++.++++++ .=++-+.++++++++..++.|++.+ -.|- ..+-++.+++|.+.+++||+. ...
T Consensus 179 ~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~i~~i-------EqP~--~~~~~~~~~~l~~~~~iPIa~------dE~ 243 (368)
T 3q45_A 179 EAAGDSITLRIDANQGWSVETAIETLTLLEPYNIQHC-------EEPV--SRNLYTALPKIRQACRIPIMA------DES 243 (368)
T ss_dssp HHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGCCSCE-------ECCB--CGGGGGGHHHHHHTCSSCEEE------STT
T ss_pred HHhCCCCeEEEECCCCCChHHHHHHHHHHhhcCCCEE-------ECCC--ChhHHHHHHHHHhhCCCCEEE------cCC
Q ss_pred ccCHHHHHHHH--hCCCEEEEEeC---CHHHHHHHHhhcCCCCEEEEeCC
Q psy11975 588 DISVDTLVKLA--HHENIRGVKDT---DNIKLANMANQTKDLNFSVFAGS 632 (786)
Q Consensus 588 ~LSpelL~rLA--eiPNVVGIKDS---Dl~ri~~ll~~~~~~df~Vf~G~ 632 (786)
..++..+.++. .--.++-+|-+ .+....++.+....-++.+..|.
T Consensus 244 ~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~gi~~~~~~ 293 (368)
T 3q45_A 244 CCNSFDAERLIQIQACDSFNLKLSKSAGITNALNIIRLAEQAHMPVQVGG 293 (368)
T ss_dssp CCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred cCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHHHHHHHHcCCcEEecC
No 500
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=28.01 E-value=1.8e+02 Score=28.75 Aligned_cols=61 Identities=13% Similarity=0.096 Sum_probs=0.0
Q ss_pred CCeEEEeCCC--CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEEeCC
Q psy11975 514 QADLLKPQKH--TTTRATIDLTQKAAKAGANAALILCPYYFQKKMTEDLIYEHFISVADNSPIPVIIYNNT 582 (786)
Q Consensus 514 RVPVIaGVGa--~ST~EAIELAr~Ae~aGADAVmViPPyY~kps~S~eeLv~YFraIAeAtdLPIiLYNiP 582 (786)
+..+++.... .+.+...+..+.+.+.++||+++.+....... ..++.+.++ ++|++++|.+
T Consensus 33 g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~~~-------~~~~~~~~~-giPvV~~~~~ 95 (297)
T 3rot_A 33 KVDLQILAPPGANDVPKQVQFIESALATYPSGIATTIPSDTAFS-------KSLQRANKL-NIPVIAVDTR 95 (297)
T ss_dssp TCEEEEECCSSSCCHHHHHHHHHHHHHTCCSEEEECCCCSSTTH-------HHHHHHHHH-TCCEEEESCC
T ss_pred CcEEEEECCCCcCCHHHHHHHHHHHHHcCCCEEEEeCCCHHHHH-------HHHHHHHHC-CCCEEEEcCC
Done!