BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11978
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O57406|CEL1A_XENLA CUGBP Elav-like family member 1-A OS=Xenopus laevis GN=cugbp1-a
PE=1 SV=1
Length = 489
Score = 76.6 bits (187), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
+M P+ PDPD IKMFVGQ+PRS E +L ++F +YG VY INVLRD+ QSKG F
Sbjct: 4 TMDHPDHPDPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 ITFYTR--KAALEAQNA 78
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + ++ +E D+ MFS +G++ +LR G S+G F
Sbjct: 109 KLFIGMVSKNCNENDIRAMFSPFGQIEECRILRGP-DGMSRGCAF 152
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSSKVFIDKQTNLSK 445
>sp|Q28HE9|CELF1_XENTR CUGBP Elav-like family member 1 OS=Xenopus tropicalis GN=celf1
PE=2 SV=1
Length = 490
Score = 76.3 bits (186), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
+M P+ PDPD IKMFVGQ+PRS E +L ++F +YG VY INVLRD+ QSKG F
Sbjct: 4 TMDHPDHPDPDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 ITFYTR--KAALEAQNA 78
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + +E D+ MFS++G++ +LR G S+G F
Sbjct: 109 KLFVGMVSKKCNENDIRAMFSQFGQIEESRILRGP-DGMSRGCAF 152
Score = 33.1 bits (74), Expect = 0.49, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 398 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 446
>sp|Q5R995|CELF1_PONAB CUGBP Elav-like family member 1 OS=Pongo abelii GN=CELF1 PE=2 SV=1
Length = 513
Score = 75.1 bits (183), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
++ P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY INVLRD+ QSKG F
Sbjct: 31 TLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCF 90
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 91 VTFYTR--KAALEAQNA 105
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 421 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 469
Score = 29.3 bits (64), Expect = 7.3, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVL 60
K+F+G I + E D+ MFS +G++ +L
Sbjct: 136 KLFIGMISKKCTENDIRVMFSSFGQIEECRIL 167
>sp|Q92879|CELF1_HUMAN CUGBP Elav-like family member 1 OS=Homo sapiens GN=CELF1 PE=1
SV=2
Length = 486
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
++ P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY INVLRD+ QSKG F
Sbjct: 4 TLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 VTFYTR--KAALEAQNA 78
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 394 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 442
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G I + E D+ MFS +G++ +LR G S+G F
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAF 152
>sp|Q5R8Y8|CELF2_PONAB CUGBP Elav-like family member 2 OS=Pongo abelii GN=CELF2 PE=2 SV=2
Length = 508
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG F +
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 92
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 93 R--KAALEAQNA 102
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 410 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 176
>sp|O95319|CELF2_HUMAN CUGBP Elav-like family member 2 OS=Homo sapiens GN=CELF2 PE=1 SV=1
Length = 508
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG F +
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 92
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 93 R--KAALEAQNA 102
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 410 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 32.3 bits (72), Expect = 0.93, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 176
>sp|Q792H5|CELF2_RAT CUGBP Elav-like family member 2 OS=Rattus norvegicus GN=Celf2 PE=2
SV=1
Length = 508
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG F +
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 92
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 93 R--KAALEAQNA 102
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 410 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 176
>sp|Q9Z0H4|CELF2_MOUSE CUGBP Elav-like family member 2 OS=Mus musculus GN=Celf2 PE=1 SV=1
Length = 508
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L ++F YG VY INVLRD+ QSKG F +
Sbjct: 33 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 92
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 93 R--KAALEAQNA 102
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 410 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 464
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 133 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 176
>sp|A4IIM2|CELF2_XENTR CUGBP Elav-like family member 2 OS=Xenopus tropicalis GN=celf2
PE=2 SV=1
Length = 513
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L +F YG VY INVLRD+ QSKG F +
Sbjct: 28 DQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 87
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 88 R--KAALEAQNA 97
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 415 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 469
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 128 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 171
>sp|Q4QQT3|CELF1_RAT CUGBP Elav-like family member 1 OS=Rattus norvegicus GN=Celf1
PE=2 SV=1
Length = 487
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
++ P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY IN+LRD+ QSKG F
Sbjct: 4 TLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 VTFYTR--KAALEAQNA 78
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 395 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 443
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G I + E D+ MFS +G++ +LR G S+G F
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAF 152
>sp|P28659|CELF1_MOUSE CUGBP Elav-like family member 1 OS=Mus musculus GN=Celf1 PE=1
SV=2
Length = 486
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
++ P+QPD D IKMFVGQ+PR+ E DL ++F +YG VY IN+LRD+ QSKG F
Sbjct: 4 TLDHPDQPDLDAIKMFVGQVPRTWSEKDLRELFEQYGAVYEINILRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 VTFYTR--KAALEAQNA 78
Score = 33.5 bits (75), Expect = 0.39, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 394 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 442
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G I + E D+ MFS +G++ +LR G S+G F
Sbjct: 109 KLFIGMISKKCTENDIRVMFSSFGQIEECRILRGP-DGLSRGCAF 152
>sp|Q7ZXE2|CELF2_XENLA CUGBP Elav-like family member 2 OS=Xenopus laevis GN=celf2 PE=1
SV=1
Length = 536
Score = 73.9 bits (180), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/72 (54%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L +F YG VY INVLRD+ QSKG F +
Sbjct: 51 DQPDPDAIKMFVGQIPRSWSEKELKDLFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 110
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 111 R--KAALEAQNA 120
Score = 32.7 bits (73), Expect = 0.70, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 438 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 492
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 151 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 194
>sp|Q6P0B1|CELF2_DANRE CUGBP Elav-like family member 2 OS=Danio rerio GN=celf2 PE=2 SV=1
Length = 514
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IKMFVGQIPRS E +L ++F YG VY IN+LRD+ QSKG F +
Sbjct: 37 DQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTFYT 96
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 97 R--KAALEAQNA 106
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS YG++ +LR G S+G F
Sbjct: 137 KLFIGMVSKKCNENDIRVMFSPYGQIEECRILRGP-DGLSRGCAF 180
Score = 32.7 bits (73), Expect = 0.75, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 416 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSK 470
>sp|Q5F3T7|CELF1_CHICK CUGBP Elav-like family member 1 OS=Gallus gallus GN=CELF1 PE=1
SV=2
Length = 489
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
++ P+QPD D IKMFVGQ+PRS E DL ++F +YG VY INVLRD+ QSKG F
Sbjct: 4 TLDHPDQPDLDAIKMFVGQVPRSWCEKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 VTFYTR--KAALEAQNA 78
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSK 445
Score = 32.7 bits (73), Expect = 0.71, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G I + +E D+ MFS +G++ +LR G S+G F
Sbjct: 109 KLFIGMISKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 152
>sp|Q6PF35|CEL1B_XENLA CUGBP Elav-like family member 1-B OS=Xenopus laevis GN=cugbp1-b
PE=2 SV=1
Length = 489
Score = 73.6 bits (179), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
+M P+ PD D IKMFVGQ+PRS E +L ++F +YG VY INVLRD+ QSKG F
Sbjct: 4 TMDHPDHPDSDSIKMFVGQVPRSWSEKELRELFEQYGAVYEINVLRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + +AA+E Q A
Sbjct: 64 ITFYTR--KAALEAQNA 78
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ +FS++G++ +LR G S+G F
Sbjct: 109 KLFIGMVSKKCNENDIRTLFSQFGQIEESRILRGP-DGMSRGCAF 152
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G + + V DK T SK
Sbjct: 397 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNIVSAKVFIDKQTNLSK 445
>sp|Q7T2T1|CELF2_CHICK CUGBP Elav-like family member 2 OS=Gallus gallus GN=CELF2 PE=1
SV=2
Length = 484
Score = 72.4 bits (176), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIFEAAFL 78
+QPDPD IK FVGQIPRS E +L ++F YG VY INVLRD+ QSKG F +
Sbjct: 9 DQPDPDAIKTFVGQIPRSWSEKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYT 68
Query: 79 KIARAAIEPQKA 90
+ +AA+E Q A
Sbjct: 69 R--KAALEAQNA 78
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 15 RSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+S + ++ P+ +F+ +P+ + D+ +MF +G V + V DK T SK
Sbjct: 386 QSAAGSQKEGPEGANLFIYHLPQEFGDQDILQMFMPFGNVISAKVFIDKQTNLSK 440
Score = 32.3 bits (72), Expect = 0.87, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+F+G + + +E D+ MFS +G++ +LR G S+G F
Sbjct: 109 KLFIGMVSKKCNENDIRVMFSPFGQIEECRILRGP-DGLSRGCAF 152
>sp|Q9IBD0|CELF1_DANRE CUGBP Elav-like family member 1 OS=Danio rerio GN=celf1 PE=1 SV=1
Length = 501
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 16 SMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG--QSKGKIF 73
S+ P+QPD D IKMFVGQIPR+ E L ++F YG VY INVLRD+ QSKG F
Sbjct: 4 SLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPPQSKGCCF 63
Query: 74 EAAFLKIARAAIEPQKA 90
+ + ++A+E Q A
Sbjct: 64 VTYYTR--KSALEAQNA 78
Score = 34.3 bits (77), Expect = 0.25, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG I + +E D+ MFS YG++ +LR G S+G F
Sbjct: 109 KLFVGMISKKCNENDIRLMFSPYGQIEECRILRGP-DGLSRGCAF 152
Score = 32.7 bits (73), Expect = 0.62, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 21 EQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
++ P+ +F+ +P+ + DL +MF +G V + V DK T SK
Sbjct: 409 QKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVISAKVFIDKQTNLSK 457
>sp|Q91579|CEL3A_XENLA CUGBP Elav-like family member 3-A OS=Xenopus laevis GN=tnrc4-a
PE=2 SV=2
Length = 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+PD IK+F+GQIPR++DE DL +F ++G++Y + V++DK TG KG F
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAF 52
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
P+ +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 374 PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSK 418
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + + D+ +MF +G + VLR G SKG F
Sbjct: 96 KLFVGMLGKQQTDEDVRRMFEPFGNIDECTVLRGP-DGTSKGCAF 139
>sp|Q7ZWM3|CEL3B_XENLA CUGBP Elav-like family member 3-B OS=Xenopus laevis GN=tnrc4-b
PE=2 SV=1
Length = 462
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+PD IK+F+GQIPR++DE DL +F ++G++Y + V++DK TG KG F
Sbjct: 3 EPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAF 52
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
P+ +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 374 PEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSK 418
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIFEAAFLKI-----ARA 83
K+FVG + + + D+ +MF +G + VLR G SKG AF+K A+A
Sbjct: 96 KLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGP-DGTSKG----CAFVKFQTHTEAQA 150
Query: 84 AIE 86
AI
Sbjct: 151 AIN 153
>sp|Q0V9L3|CELF4_XENTR CUGBP Elav-like family member 4 OS=Xenopus tropicalis GN=celf4
PE=2 SV=1
Length = 424
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG F
Sbjct: 43 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAF 92
>sp|Q7TSY6|CELF4_MOUSE CUGBP Elav-like family member 4 OS=Mus musculus GN=Celf4 PE=1
SV=2
Length = 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG F
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAF 99
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 22 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
QP K+FVG + + E D+ ++F +G + +LR G SKG F
Sbjct: 146 QPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKGCAF 196
>sp|Q5NVC8|CELF4_PONAB CUGBP Elav-like family member 4 OS=Pongo abelii GN=CELF4 PE=2
SV=2
Length = 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG F
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAF 99
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 22 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
QP K+FVG + + E D+ ++F +G + +LR G SKG F
Sbjct: 146 QPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKGCAF 196
>sp|Q9BZC1|CELF4_HUMAN CUGBP Elav-like family member 4 OS=Homo sapiens GN=CELF4 PE=1
SV=1
Length = 486
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG F
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAF 99
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 22 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
QP K+FVG + + E D+ ++F +G + +LR G SKG F
Sbjct: 146 QPPSQDRKLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKGCAF 196
>sp|Q4R535|CELF4_MACFA CUGBP Elav-like family member 4 OS=Macaca fascicularis GN=CELF4
PE=2 SV=1
Length = 474
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG KG F
Sbjct: 50 DHDAIKLFIGQIPRNLDEKDLKPLFEEFGKIYELTVLKDRFTGMHKGCAF 99
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + E D+ ++F +G + +LR G SKG F
Sbjct: 142 KLFVGMLNKQQSEDDVRRLFEAFGNIEECTILRGP-DGNSKGCAF 185
>sp|Q6DGV1|CELF4_DANRE CUGBP Elav-like family member 4 OS=Danio rerio GN=celf4 PE=2 SV=1
Length = 520
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 10 TYEYVRSMSLPEQPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
T+ ++P + D D IK+F+GQIPR++DE DL +F E+G++Y + VL+D+ TG K
Sbjct: 30 THSPASCATIPMK-DHDAIKLFIGQIPRNLDEKDLRPLFEEFGKIYELTVLKDRFTGMHK 88
Query: 70 GKIF 73
G F
Sbjct: 89 GCAF 92
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 25/45 (55%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
P+ +F+ +P+ + +L +MF +G V + V D+ T QSK
Sbjct: 432 PEGCNLFIYHLPQEFGDGELMQMFLPFGNVISSKVFVDRATNQSK 476
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + E D+ ++F +G + +LR G SKG F
Sbjct: 136 KLFVGMLNKQQCEDDVRRLFESFGSIEECTILRGP-DGNSKGCAF 179
>sp|Q7TN33|CELF6_MOUSE CUGBP Elav-like family member 6 OS=Mus musculus GN=Celf6 PE=2
SV=1
Length = 460
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+FVGQIPR +DE DL +F E+GR+Y + VL+D++TG KG F
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAF 91
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 18 SLPEQ--PDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
+LP+Q P+ +F+ +P+ +A+L + F +G V + V D+ T QSK
Sbjct: 363 ALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATNQSK 416
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 10/63 (15%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIFEAAFLKI-----ARA 83
K+FVG + + E D+ ++F +G + VLR G SKG AF+K A+A
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKG----CAFVKFGSQGEAQA 189
Query: 84 AIE 86
AI+
Sbjct: 190 AIQ 192
>sp|Q96J87|CELF6_HUMAN CUGBP Elav-like family member 6 OS=Homo sapiens GN=CELF6 PE=1
SV=1
Length = 481
Score = 63.5 bits (153), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D D IK+FVGQIPR +DE DL +F E+GR+Y + VL+D++TG KG F
Sbjct: 42 DHDAIKLFVGQIPRGLDEQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAF 91
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 9/63 (14%)
Query: 16 SMSLPEQPD---------PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTG 66
S + P+QP P+ +F+ +P+ +A+L + F +G V + V D+ T
Sbjct: 375 STAFPQQPSALPQQQREGPEGCNLFIYHLPQEFGDAELIQTFLPFGAVVSAKVFVDRATN 434
Query: 67 QSK 69
QSK
Sbjct: 435 QSK 437
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + E D+ ++F +G + VLR G SKG F
Sbjct: 135 KLFVGMLGKQQGEEDVRRLFQPFGHIEECTVLRSP-DGTSKGCAF 178
>sp|A0JM51|CELF5_XENTR CUGBP Elav-like family member 5 OS=Xenopus tropicalis GN=celf5
PE=2 SV=1
Length = 486
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 8/65 (12%)
Query: 17 MSLPEQP--------DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQS 68
MS PE P D D IK+FVGQIPR+++E DL +F ++G++Y + VL+D+ TG
Sbjct: 28 MSGPEPPAQQSDSMKDLDAIKLFVGQIPRNLEEKDLKPLFEQFGKIYELTVLKDRYTGMH 87
Query: 69 KGKIF 73
KG F
Sbjct: 88 KGCAF 92
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
P+ +F+ +P+ + +LT+MF +G + + V D+ T QSK
Sbjct: 398 PEGCNLFIYHLPQEFGDNELTQMFLPFGNIISSKVFMDRATNQSK 442
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIFEAAFLKI-----ARA 83
K+FVG + + E ++T MF +G + +VLR G SKG AF+K A+A
Sbjct: 136 KLFVGMLSKQQSEEEVTSMFQAFGSIEECSVLRGP-DGSSKG----CAFVKFSSHAEAQA 190
Query: 84 AIE 86
AI+
Sbjct: 191 AIQ 193
>sp|Q8CIN6|CELF3_MOUSE CUGBP Elav-like family member 3 OS=Mus musculus GN=Celf3 PE=2
SV=1
Length = 465
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+PD IK+FVGQIPR ++E DL +F ++GR++ + V++DK TG KG F
Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAF 52
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
PD +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 377 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSK 421
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + + D+ KMF +G + VLR G SKG F
Sbjct: 95 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAF 138
>sp|Q5SZQ8|CELF3_HUMAN CUGBP Elav-like family member 3 OS=Homo sapiens GN=CELF3 PE=1
SV=1
Length = 465
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+PD IK+FVGQIPR ++E DL +F ++GR++ + V++DK TG KG F
Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAF 52
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
PD +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 377 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSK 421
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + + D+ KMF +G + VLR G SKG F
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAF 139
>sp|Q08E07|CELF3_BOVIN CUGBP Elav-like family member 3 OS=Bos taurus GN=CELF3 PE=2 SV=1
Length = 461
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+PD IK+FVGQIPR ++E DL +F ++GR++ + V++DK TG KG F
Sbjct: 3 EPDAIKLFVGQIPRHLEEKDLKPIFEQFGRIFELTVIKDKYTGLHKGCAF 52
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
PD +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 373 PDGCNIFIYHLPQEFTDSEILQMFVPFGHVISAKVFVDRATNQSK 417
Score = 32.7 bits (73), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + + D+ KMF +G + VLR G SKG F
Sbjct: 96 KLFVGMLGKQQTDEDVRKMFEPFGTIDECTVLRGP-DGTSKGCAF 139
>sp|Q8N6W0|CELF5_HUMAN CUGBP Elav-like family member 5 OS=Homo sapiens GN=CELF5 PE=1
SV=1
Length = 485
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/64 (48%), Positives = 39/64 (60%), Gaps = 8/64 (12%)
Query: 18 SLPEQP--------DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
S PE P D D IK+FVGQIPR +DE DL +F ++GR+Y + VL+D TG K
Sbjct: 27 SGPEPPGGQPDGMKDLDAIKLFVGQIPRHLDEKDLKPLFEQFGRIYELTVLKDPYTGMHK 86
Query: 70 GKIF 73
G F
Sbjct: 87 GCAF 90
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
P+ +F+ +P+ + +LT+MF +G + + V D+ T QSK
Sbjct: 397 PEGCNLFIYHLPQEFGDTELTQMFLPFGNIISSKVFMDRATNQSK 441
Score = 30.0 bits (66), Expect = 4.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + E D+ ++F +G + VLR G SKG F
Sbjct: 135 KLFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGP-DGSSKGCAF 178
>sp|Q9IBD1|CELF3_DANRE CUGBP Elav-like family member 3 OS=Danio rerio GN=celf3 PE=2 SV=2
Length = 452
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 26 DFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
D IK+F+GQIPR+++E DL +F ++G++Y + V++DK TG KG F
Sbjct: 5 DAIKLFIGQIPRNLEEKDLKPIFEQFGKIYELTVIKDKYTGMHKGCAF 52
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
K+FVG + + + +AD+ KMF +G + VLR G SKG F
Sbjct: 95 KLFVGMLGKQLSDADVRKMFEPFGSIEECTVLRGP-DGASKGCAF 138
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSK 69
P+ +F+ +P+ ++++ +MF +G V + V D+ T QSK
Sbjct: 364 PEGCNIFIYHLPQEFTDSEMLQMFLPFGNVISAKVFVDRATNQSK 408
>sp|Q8R0F5|RBMX2_MOUSE RNA-binding motif protein, X-linked 2 OS=Mus musculus GN=Rbmx2
PE=1 SV=1
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+FVG +P + E D+ +FS+YG + NIN++RDK TG+SKG F
Sbjct: 38 IFVGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>sp|Q10B98|C3H25_ORYSJ Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa
subsp. japonica GN=Os03g0826400 PE=2 SV=1
Length = 312
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 26 DFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIFEA 75
D +FVG IP + E DL +F++YG V ++N++RDK TG+SKG F A
Sbjct: 34 DSAYVFVGGIPYDLTEGDLLAVFAQYGEVVDVNLVRDKGTGKSKGFAFLA 83
>sp|B0BN49|RBMX2_RAT RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus
GN=Rbmx2 PE=2 SV=1
Length = 328
Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+F+G +P + E D+ +FS+YG + NIN++RDK TG+SKG F
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>sp|Q9SD61|C3H42_ARATH Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis
thaliana GN=At3g47120 PE=2 SV=1
Length = 352
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIFEA 75
++VG IP + E DL +FS+YG + ++N++RDK TG+SKG F A
Sbjct: 38 VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLA 83
>sp|Q9Y388|RBMX2_HUMAN RNA-binding motif protein, X-linked 2 OS=Homo sapiens GN=RBMX2
PE=1 SV=2
Length = 322
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 32/44 (72%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+F+G +P + E D+ +FS+YG + NIN++RDK TG+SKG F
Sbjct: 38 IFLGGLPYELTEGDIICVFSQYGEIVNINLVRDKKTGKSKGFCF 81
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana sylvestris
PE=1 SV=1
Length = 315
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 20 PEQPDPDF---IKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 70
PE+P F +++VG IP +D+A L ++FSE+G+V + V+ D+ TG+S+G
Sbjct: 219 PERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRSRG 272
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 70
K+FVG +P +D L ++F + G V V+ ++ T QS+G
Sbjct: 137 KLFVGNLPYDVDSEGLARLFEQAGVVEIAEVIYNRDTDQSRG 178
>sp|Q15717|ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapiens GN=ELAVL1 PE=1 SV=2
Length = 326
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 22 QPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+P + IK +++ +PR+M + D+ MFS +GR+ N VL D+ TG S+G F
Sbjct: 97 RPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAF 151
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+ V +P++M + +L +FS G V + ++RDKV G S G F
Sbjct: 22 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Score = 32.7 bits (73), Expect = 0.60, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 70
+F+ + + DE L +MF +G V N+ V+RD T + KG
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
>sp|P70372|ELAV1_MOUSE ELAV-like protein 1 OS=Mus musculus GN=Elavl1 PE=1 SV=2
Length = 326
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 22 QPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+P + IK +++ +PR+M + D+ MFS +GR+ N VL D+ TG S+G F
Sbjct: 97 RPSSEVIKDANLYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAF 151
Score = 35.4 bits (80), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+ V +P++M + +L +FS G V + ++RDKV G S G F
Sbjct: 21 NLIVNYLPQNMTQEELRSLFSSIGEVESAKLIRDKVAGHSLGYGF 65
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 70
+F+ + + DE L +MF +G V N+ V+RD T + KG
Sbjct: 246 IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKG 286
>sp|O97018|SXL_CHRRU Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 3 REKRRECTYEYVRSMSLPEQPDPDFIK---MFVGQIPRSMDEADLTKMFSEYGRVYNINV 59
R KR + +Y +P + IK ++V +PR++ + +L K+F +YG + N+
Sbjct: 152 RNKRLKVSYA---------RPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNI 202
Query: 60 LRDKVTGQSKGKIF 73
LRDK+TG+ +G F
Sbjct: 203 LRDKLTGKPRGVAF 216
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis thaliana
GN=At2g37220 PE=1 SV=1
Length = 289
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 28 IKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+K+FVG +P ++D A L ++F G V + V+ DK+TG+S+G F
Sbjct: 91 LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGF 136
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+++VG + +D+ L +FSE G+V V+ D+ +G+SKG F
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGF 249
>sp|O17310|SXL_MUSDO Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
++V +PR++ + +L K+F +YG + N+LRDK+TG+ +G F
Sbjct: 189 NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAF 233
>sp|Q91584|ELAV3_XENLA ELAV-like protein 3 OS=Xenopus laevis GN=elavl3 PE=2 SV=1
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
++V +P++M++ ++ ++FS+YGR+ +L D+VTG S+G F
Sbjct: 122 LYVSSLPKTMNQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGF 165
Score = 36.2 bits (82), Expect = 0.069, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 28/52 (53%)
Query: 22 QPDPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+ D + V +P++M + + +F G + + ++RDK+TGQS G F
Sbjct: 28 EADDSKTNLIVNYLPQNMTQEEFKSLFGSIGEIESCKLVRDKITGQSLGYGF 79
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 70
+FV + DE+ L ++F +G V N+ V+RD T + KG
Sbjct: 267 IFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKG 307
>sp|Q00916|RU17_YEAST U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SNP1 PE=1
SV=1
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 24 DPDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
DP + +F+G++P +DE +L K F ++G + I +++DK+T +SKG F
Sbjct: 104 DP-YRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAF 152
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris
PE=2 SV=1
Length = 273
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 25 PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
PD +K+FVG +P S D A L ++F G V + V+ DK+TG+S+G F
Sbjct: 85 PD-LKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGF 132
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+++VG + +D+ L +FSE G+V + V+ D+ +G+S+G F
Sbjct: 189 RVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGF 233
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana sylvestris
PE=2 SV=1
Length = 291
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 19 LPEQPD-PDFIKMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+ EQP + +K+FVG +P S+D A L +F G V + V+ DK+TG+S+G F
Sbjct: 77 VAEQPRFSEDLKLFVGNLPFSVDSAALAGLFERAGNVEMVEVIYDKLTGRSRGFGF 132
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 29 KMFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
+++VG + +D+ L ++FSE G V + V+ D+ +G+S+G F
Sbjct: 208 RVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGF 252
>sp|O94290|IST3_SCHPO U2 snRNP component ist3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=cwf29 PE=1 SV=1
Length = 217
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 4/50 (8%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIFEAAFLK 79
+++G + ++E D+ +FSE+G +IN++RDK TG+SKG AFLK
Sbjct: 33 IYIGNLDFDLNEDDILCVFSEFGEPVDINLVRDKETGKSKG----FAFLK 78
>sp|Q91903|ELAV2_XENLA ELAV-like protein 2 OS=Xenopus laevis GN=elavl2 PE=1 SV=2
Length = 389
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKGKIF 73
++V +P++M + +L ++FS+YGR+ +L D+VTG S+G F
Sbjct: 155 LYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGF 198
Score = 33.1 bits (74), Expect = 0.51, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVTGQSKG 70
+FV + DE+ L +MF +G V N+ V+RD T + KG
Sbjct: 308 IFVYNLAPDADESILWQMFGPFGAVTNVKVIRDFNTNKCKG 348
Score = 32.3 bits (72), Expect = 0.97, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 30 MFVGQIPRSMDEADLTKMFSEYGRVYNINVLRDKVT-GQSKGKIF 73
+ V +P++M + +L +F G + + ++RDK+T GQS G F
Sbjct: 68 LIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITEGQSLGYGF 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,296,332
Number of Sequences: 539616
Number of extensions: 1106847
Number of successful extensions: 3874
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 539
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3050
Number of HSP's gapped (non-prelim): 859
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)