Your job contains 1 sequence.
>psy1198
RRSSSRGGGGVGGGGHHNSGSAAAAAATSGGGQGGKAATLYGAPGGGKAATLYAQSGMSA
GETQGGSVAGEEDKNAGAQGSTSTSGAASGTASTSLLSGVASSSSGPSHAPGAALDSESE
DTATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMD
HNFDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRR
HSKAILQAF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1198
(249 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F6X7F9 - symbol:TRIP12 "Uncharacterized protein... 525 6.5e-49 1
UNIPROTKB|E1B7Q7 - symbol:TRIP12 "E3 ubiquitin-protein li... 525 6.6e-49 1
UNIPROTKB|Q14669 - symbol:TRIP12 "E3 ubiquitin-protein li... 525 6.6e-49 1
UNIPROTKB|E2R657 - symbol:TRIP12 "Uncharacterized protein... 525 6.6e-49 1
UNIPROTKB|I3LK74 - symbol:TRIP12 "Uncharacterized protein... 525 6.6e-49 1
UNIPROTKB|J9NRQ4 - symbol:TRIP12 "Uncharacterized protein... 525 6.7e-49 1
MGI|MGI:1309481 - symbol:Trip12 "thyroid hormone receptor... 525 6.8e-49 1
RGD|1306607 - symbol:Trip12 "thyroid hormone receptor int... 525 6.8e-49 1
UNIPROTKB|E1BZV7 - symbol:TRIP12 "Uncharacterized protein... 524 8.7e-49 1
UNIPROTKB|B4F6W9 - symbol:trip12 "E3 ubiquitin-protein li... 524 8.8e-49 1
ZFIN|ZDB-GENE-041111-262 - symbol:trip12 "thyroid hormone... 514 1.1e-47 1
FB|FBgn0260794 - symbol:ctrip "circadian trip" species:72... 500 4.4e-47 2
TAIR|locus:2121224 - symbol:KAK "AT4G38600" species:3702 ... 239 1.6e-18 1
DICTYBASE|DDB_G0287221 - symbol:DDB_G0287221 "armadillo r... 232 9.1e-18 1
TAIR|locus:2151306 - symbol:UPL4 "AT5G02880" species:3702... 188 3.3e-13 1
ASPGD|ASPL0000044576 - symbol:hulC species:162425 "Emeric... 153 2.3e-11 2
UNIPROTKB|Q5BCI4 - symbol:AN1746.2 "Ubiquitin-protein lig... 153 2.3e-11 2
UNIPROTKB|Q7S5Y8 - symbol:NCU09866 "Putative uncharacteri... 171 2.9e-11 1
UNIPROTKB|G4NHH2 - symbol:MGG_03841 "E3 ubiquitin-protein... 165 1.2e-10 1
UNIPROTKB|Q75DK8 - symbol:AGOS_ABR013W "ABR013Wp" species... 115 0.00031 1
SGD|S000001493 - symbol:UFD4 "Ubiquitin-protein ligase (E... 114 0.00044 1
POMBASE|SPAC12B10.01c - symbol:SPAC12B10.01c "ubiquitin-p... 114 0.00049 1
>UNIPROTKB|F6X7F9 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 Ensembl:ENSCAFT00000016899
EMBL:AAEX03014420 Uniprot:F6X7F9
Length = 1980
Score = 525 (189.9 bits), Expect = 6.5e-49, P = 6.5e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 442 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 500
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 501 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 560
Query: 243 KAILQA 248
KAILQA
Sbjct: 561 KAILQA 566
>UNIPROTKB|E1B7Q7 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9913 "Bos taurus" [GO:0009790 "embryo development"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:2000780
"negative regulation of double-strand break repair" evidence=ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0046966 "thyroid hormone receptor binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006281 GO:GO:0006974 GO:GO:0009790
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004170 PROSITE:PS50918
SUPFAM:SSF56204 GeneTree:ENSGT00530000063470 GO:GO:2000780
GO:GO:1901315 KO:K10590 EMBL:DAAA02006173 EMBL:DAAA02006174
EMBL:DAAA02006175 EMBL:BC119851 IPI:IPI00825667
RefSeq:NP_001178132.1 UniGene:Bt.6328 Ensembl:ENSBTAT00000038151
GeneID:514387 KEGG:bta:514387 CTD:9320 OMA:LNMNGCS NextBio:20871310
Uniprot:E1B7Q7
Length = 1992
Score = 525 (189.9 bits), Expect = 6.6e-49, P = 6.6e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 436 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 494
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 495 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 554
Query: 243 KAILQA 248
KAILQA
Sbjct: 555 KAILQA 560
>UNIPROTKB|Q14669 [details] [associations]
symbol:TRIP12 "E3 ubiquitin-protein ligase TRIP12"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=NAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;NAS;IBA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=IDA;IMP;IBA] [GO:0046966 "thyroid hormone receptor
binding" evidence=IDA] [GO:0005575 "cellular_component"
evidence=ND] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:2000780 "negative regulation
of double-strand break repair" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009790 "embryo development" evidence=ISS]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 UniPathway:UPA00143 GO:GO:0005737 Reactome:REACT_6900
GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0006281 GO:GO:0006974 GO:GO:0009790 GO:GO:0004842
GO:GO:0046966 GO:GO:0042787 InterPro:IPR004170 PROSITE:PS50918
EMBL:AC093384 SUPFAM:SSF56204 eggNOG:COG5021 GO:GO:2000780
GO:GO:1901315 KO:K10590 CTD:9320 OMA:LNMNGCS EMBL:EU489742
EMBL:D28476 EMBL:AC009973 EMBL:AC105380 EMBL:BC114556 EMBL:BC113891
EMBL:L40383 IPI:IPI00032342 IPI:IPI00783250 IPI:IPI00871861
RefSeq:NP_004229.1 UniGene:Hs.591633 ProteinModelPortal:Q14669
SMR:Q14669 DIP:DIP-58584N IntAct:Q14669 MINT:MINT-1192877
STRING:Q14669 PhosphoSite:Q14669 DMDM:2499839 PaxDb:Q14669
PRIDE:Q14669 Ensembl:ENST00000283943 Ensembl:ENST00000389044
Ensembl:ENST00000389045 GeneID:9320 KEGG:hsa:9320 UCSC:uc002vpw.1
GeneCards:GC02M230595 HGNC:HGNC:12306 MIM:604506 neXtProt:NX_Q14669
PharmGKB:PA36985 HOGENOM:HOG000007873 HOVERGEN:HBG062085
OrthoDB:EOG4MCWZF ChiTaRS:TRIP12 GenomeRNAi:9320 NextBio:34913
ArrayExpress:Q14669 Bgee:Q14669 CleanEx:HS_TRIP12
Genevestigator:Q14669 GermOnline:ENSG00000153827 Uniprot:Q14669
Length = 1992
Score = 525 (189.9 bits), Expect = 6.6e-49, P = 6.6e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 436 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 494
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 495 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 554
Query: 243 KAILQA 248
KAILQA
Sbjct: 555 KAILQA 560
>UNIPROTKB|E2R657 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 Ensembl:ENSCAFT00000016899
Uniprot:E2R657
Length = 1993
Score = 525 (189.9 bits), Expect = 6.6e-49, P = 6.6e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 436 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 494
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 495 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 554
Query: 243 KAILQA 248
KAILQA
Sbjct: 555 KAILQA 560
>UNIPROTKB|I3LK74 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000780 "negative regulation of double-strand break
repair" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:0046966 "thyroid
hormone receptor binding" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 OMA:LNMNGCS Ensembl:ENSSSCT00000029290
Uniprot:I3LK74
Length = 2002
Score = 525 (189.9 bits), Expect = 6.6e-49, P = 6.6e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 444 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 502
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 503 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 562
Query: 243 KAILQA 248
KAILQA
Sbjct: 563 KAILQA 568
>UNIPROTKB|J9NRQ4 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
EMBL:AAEX03014420 Ensembl:ENSCAFT00000045557 OMA:GNGTGGX
Uniprot:J9NRQ4
Length = 2011
Score = 525 (189.9 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 455 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 513
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 514 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 573
Query: 243 KAILQA 248
KAILQA
Sbjct: 574 KAILQA 579
>MGI|MGI:1309481 [details] [associations]
symbol:Trip12 "thyroid hormone receptor interactor 12"
species:10090 "Mus musculus" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISO;IBA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005654
"nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=ISO] [GO:0009790 "embryo
development" evidence=IMP] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO;IBA]
[GO:0046966 "thyroid hormone receptor binding" evidence=ISO]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISO] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISO] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1309481 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006281
GO:GO:0006974 GO:GO:0009790 GO:GO:0004842 GO:GO:0042787
InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GeneTree:ENSGT00530000063470 GO:GO:2000780 GO:GO:1901315 KO:K10590
CTD:9320 OMA:LNMNGCS ChiTaRS:TRIP12 EMBL:AC123882 EMBL:CH466629
EMBL:AK034814 EMBL:AK134397 EMBL:AK158807 EMBL:BC034113
RefSeq:NP_598736.4 UniGene:Mm.209265 IntAct:G5E870 PRIDE:G5E870
Ensembl:ENSMUST00000027421 GeneID:14897 KEGG:mmu:14897
NextBio:287187 Bgee:G5E870 Uniprot:G5E870
Length = 2025
Score = 525 (189.9 bits), Expect = 6.8e-49, P = 6.8e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 442 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 500
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 501 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 560
Query: 243 KAILQA 248
KAILQA
Sbjct: 561 KAILQA 566
>RGD|1306607 [details] [associations]
symbol:Trip12 "thyroid hormone receptor interactor 12"
species:10116 "Rattus norvegicus" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISO;ISS;IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0005654 "nucleoplasm" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO;ISS] [GO:0009790 "embryo development"
evidence=ISO;ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process"
evidence=ISO;ISS;IBA] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISO] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=ISO;ISS] [GO:2000780
"negative regulation of double-strand break repair"
evidence=ISO;ISS] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 RGD:1306607 GO:GO:0005737 GO:GO:0005654
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006281
GO:GO:0006974 GO:GO:0009790 GO:GO:0004842 GO:GO:0042787
InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918 SUPFAM:SSF56204
GO:GO:2000780 GO:GO:1901315 KO:K10590 CTD:9320 EMBL:BC088304
EMBL:BC100624 IPI:IPI00362998 RefSeq:NP_001026829.1 UniGene:Rn.8277
PRIDE:F1LP64 Ensembl:ENSRNOT00000022873 GeneID:316575
KEGG:rno:316575 NextBio:671026 ArrayExpress:F1LP64 Uniprot:F1LP64
Length = 2025
Score = 525 (189.9 bits), Expect = 6.8e-49, P = 6.8e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 442 SSKAQQLLQGLQA-SDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 500
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 501 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 560
Query: 243 KAILQA 248
KAILQA
Sbjct: 561 KAILQA 566
>UNIPROTKB|E1BZV7 [details] [associations]
symbol:TRIP12 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0046966 "thyroid hormone receptor
binding" evidence=IEA] [GO:1901315 "negative regulation of histone
H2A K63-linked ubiquitination" evidence=IEA] [GO:2000780 "negative
regulation of double-strand break repair" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016567 GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
OMA:LNMNGCS EMBL:AC147645 IPI:IPI00588987
Ensembl:ENSGALT00000004623 Uniprot:E1BZV7
Length = 2035
Score = 524 (189.5 bits), Expect = 8.7e-49, P = 8.7e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 482 SSKAQQLLQGLQAT-DESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 540
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 541 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 600
Query: 243 KAILQA 248
KAILQA
Sbjct: 601 KAILQA 606
>UNIPROTKB|B4F6W9 [details] [associations]
symbol:trip12 "E3 ubiquitin-protein ligase TRIP12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005654
"nucleoplasm" evidence=ISS] [GO:0006974 "response to DNA damage
stimulus" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:1901315 "negative regulation of histone H2A K63-linked
ubiquitination" evidence=ISS] [GO:2000780 "negative regulation of
double-strand break repair" evidence=ISS] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 GO:GO:0005654 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006281 GO:GO:0006974 GO:GO:0009790
GO:GO:0004842 GO:GO:0042787 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 SUPFAM:SSF56204 GO:GO:2000780 GO:GO:1901315
KO:K10590 CTD:9320 HOVERGEN:HBG062085 EMBL:AAMC01022090
EMBL:AAMC01022091 EMBL:AAMC01022092 EMBL:AAMC01022093
EMBL:AAMC01022094 EMBL:AAMC01022095 EMBL:AAMC01022096 EMBL:BC168042
EMBL:BC166201 RefSeq:NP_001136384.1 UniGene:Str.66021
ProteinModelPortal:B4F6W9 STRING:B4F6W9 GeneID:100158539
KEGG:xtr:100158539 Xenbase:XB-GENE-6071044 Uniprot:B4F6W9
Length = 2056
Score = 524 (189.5 bits), Expect = 8.8e-49, P = 8.8e-49
Identities = 105/126 (83%), Positives = 117/126 (92%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA DE QQLQAV+EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 478 SSKAQQLLQGLQAT-DESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 536
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+ACRALTYMMEALPRSSAVV+DA+P FLEKLQVIQC+DVAEQ+LTALEMLSRRHS
Sbjct: 537 FDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHS 596
Query: 243 KAILQA 248
KAILQA
Sbjct: 597 KAILQA 602
>ZFIN|ZDB-GENE-041111-262 [details] [associations]
symbol:trip12 "thyroid hormone receptor interactor
12" species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:1901315 "negative regulation of histone H2A
K63-linked ubiquitination" evidence=ISS] [GO:0005654 "nucleoplasm"
evidence=ISS] [GO:2000780 "negative regulation of double-strand
break repair" evidence=ISS] [GO:0009790 "embryo development"
evidence=ISS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237
SMART:SM00119 ZFIN:ZDB-GENE-041111-262 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 InterPro:IPR004170 Pfam:PF02825 PROSITE:PS50918
SUPFAM:SSF56204 GeneTree:ENSGT00530000063470 EMBL:BX255887
EMBL:CU928079 IPI:IPI00866688 Ensembl:ENSDART00000087566
ArrayExpress:F1Q529 Bgee:F1Q529 Uniprot:F1Q529
Length = 2095
Score = 514 (186.0 bits), Expect = 1.1e-47, P = 1.1e-47
Identities = 103/126 (81%), Positives = 115/126 (91%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHN 182
++KAQQLL LQA GDE QQLQA +EMCQ+LVMGNE+TL GFPVK VVPALITLL M+HN
Sbjct: 517 SSKAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHN 576
Query: 183 FDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
FD+MN+A RALTYMMEALPRSSAVV+DA+P FLEKLQVIQ +DVAEQ+LTALEMLSRRHS
Sbjct: 577 FDIMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHS 636
Query: 243 KAILQA 248
KAILQA
Sbjct: 637 KAILQA 642
>FB|FBgn0260794 [details] [associations]
symbol:ctrip "circadian trip" species:7227 "Drosophila
melanogaster" [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0042752 "regulation
of circadian rhythm" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
InterPro:IPR018123 PROSITE:PS50237 SMART:SM00119 SMART:SM00678
EMBL:AE014297 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0022008 GO:GO:0008270 GO:GO:0042752 GO:GO:0016567
GO:GO:0005622 GO:GO:0004842 InterPro:IPR004170 Pfam:PF02825
PROSITE:PS50918 SUPFAM:SSF56204 GeneTree:ENSGT00530000063470
RefSeq:NP_001189170.1 RefSeq:NP_649496.3 STRING:Q9VN58
EnsemblMetazoa:FBtr0301437 EnsemblMetazoa:FBtr0303911 GeneID:40596
KEGG:dme:Dmel_CG42574 UCSC:CG17735-RB FlyBase:FBgn0260794
InParanoid:Q9VN58 OMA:SAGANEN OrthoDB:EOG47H44W PhylomeDB:Q9VN58
GenomeRNAi:40596 NextBio:819575 ArrayExpress:Q9VN58 Bgee:Q9VN58
Uniprot:Q9VN58
Length = 3140
Score = 500 (181.1 bits), Expect = 4.4e-47, Sum P(2) = 4.4e-47
Identities = 99/127 (77%), Positives = 113/127 (88%)
Query: 122 TATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDH 181
+++KA QLL LQ+ DE QQLQA +EMCQMLVMGNEDTL GFP+KQVVPALI LL M+H
Sbjct: 1081 SSSKANQLLQGLQS-HDESQQLQAAIEMCQMLVMGNEDTLAGFPIKQVVPALIQLLRMEH 1139
Query: 182 NFDMMNNACRALTYMMEALPRSSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRH 241
NFD+MNNACRAL YM+EALPRSS V++AVP FLEKLQVIQCMDVAEQSL+ALE+LSRRH
Sbjct: 1140 NFDIMNNACRALAYMLEALPRSSGTVVEAVPVFLEKLQVIQCMDVAEQSLSALEILSRRH 1199
Query: 242 SKAILQA 248
+KAILQA
Sbjct: 1200 NKAILQA 1206
Score = 45 (20.9 bits), Expect = 4.4e-47, Sum P(2) = 4.4e-47
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 43 APGGGKAATLYAQSGMSAGETQGGSVAGEEDKN 75
APGGG +T SG G G + A + + +
Sbjct: 1010 APGGGPTST-GTTSGTQHGSGSGAAAAVDSESD 1041
Score = 41 (19.5 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 10/29 (34%), Positives = 12/29 (41%)
Query: 42 GAPGGGKAATLYAQSGMSAGETQGGSVAG 70
G+ GGG A +G SA S G
Sbjct: 954 GSDGGGSAGGATPATGASASSVGNTSAVG 982
Score = 37 (18.1 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 42 GAPGGGKAATLYAQSGMS 59
GA GGG AT + S S
Sbjct: 554 GAGGGGPRATRSSNSNSS 571
Score = 37 (18.1 bits), Expect = 3.1e-46, Sum P(2) = 3.1e-46
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 49 AATLYAQSGMSAGETQGGSVAG 70
AA L A + G GGS G
Sbjct: 942 AAALSAARDVGGGSDGGGSAGG 963
>TAIR|locus:2121224 [details] [associations]
symbol:KAK "AT4G38600" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0010091 "trichome branching" evidence=IMP]
[GO:0042023 "DNA endoreduplication" evidence=IMP] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0050665
"hydrogen peroxide biosynthetic process" evidence=RCA] Pfam:PF00632
InterPro:IPR000225 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50176 PROSITE:PS50237 SMART:SM00119 SMART:SM00185
UniPathway:UPA00143 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005622 GO:GO:0004842 GO:GO:0042787
GO:GO:0010091 EMBL:AL161593 GO:GO:0042023 EMBL:AL035540
SUPFAM:SSF56204 eggNOG:COG5021 HSSP:Q9UEP9 KO:K10590 OMA:LNMNGCS
EMBL:AY265959 EMBL:AK229635 EMBL:BN000268 IPI:IPI00548433
PIR:T05688 PIR:T05689 RefSeq:NP_849567.2 UniGene:At.47500
UniGene:At.708 ProteinModelPortal:Q6WWW4 SMR:Q6WWW4 STRING:Q6WWW4
PaxDb:Q6WWW4 PRIDE:Q6WWW4 ProMEX:Q6WWW4 EnsemblPlants:AT4G38600.1
GeneID:830017 KEGG:ath:AT4G38600 TAIR:At4g38600
HOGENOM:HOG000238707 InParanoid:Q6WWW4 PhylomeDB:Q6WWW4
ProtClustDB:CLSN2680326 ArrayExpress:Q6WWW4 Genevestigator:Q6WWW4
Uniprot:Q6WWW4
Length = 1888
Score = 239 (89.2 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 52/126 (41%), Positives = 84/126 (66%)
Query: 125 KAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHNFD 184
+ +++L L+A G+E +Q++A+ ++C+ML +G ED+L+ F V VP L+ LL+ + N D
Sbjct: 194 RMKKILSGLRAEGEEGKQVEALTQLCEMLSIGTEDSLSTFSVDSFVPVLVGLLNHESNPD 253
Query: 185 MMNNACRALTYMMEALPRSSAVVLD--AVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
+M A RALT++ + LP S A V+ AV + +L I+ MD+AEQSL AL+ +S+ H
Sbjct: 254 IMLLAARALTHLCDVLPSSCAAVVHYGAVSCLVARLLTIEYMDLAEQSLQALKKISQEHP 313
Query: 243 KAILQA 248
A L+A
Sbjct: 314 TACLRA 319
>DICTYBASE|DDB_G0287221 [details] [associations]
symbol:DDB_G0287221 "armadillo repeat-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0006464
"cellular protein modification process" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0016874 "ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000225 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 SMART:SM00185
dictyBase:DDB_G0287221 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0004842 GO:GO:0042787
EMBL:AAFI02000099 SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590
OMA:LNMNGCS RefSeq:XP_637315.1 ProteinModelPortal:Q54KP2
EnsemblProtists:DDB0235186 GeneID:8626012 KEGG:ddi:DDB_G0287221
InParanoid:Q54KP2 Uniprot:Q54KP2
Length = 1898
Score = 232 (86.7 bits), Expect = 9.1e-18, P = 9.1e-18
Identities = 53/126 (42%), Positives = 81/126 (64%)
Query: 125 KAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHNFD 184
+A+ LL L++ DE +Q+++++E+C +L + E+T+ GFP PAL+ LL+MDHN D
Sbjct: 108 RAKLLLQGLKS-EDETKQMESLLELCDLLSIATEETIAGFPSDSFAPALVNLLNMDHNPD 166
Query: 185 MMNNACRALTYMMEALPRSSAVVLD--AVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
+M A RAL M+EALP S A V++ AV KL I+ +D+AEQ L LE +S+
Sbjct: 167 IMLLAGRALCNMIEALPSSVASVINHGAVTILCSKLLSIEYIDLAEQCLQTLEKISQEQP 226
Query: 243 KAILQA 248
+L+A
Sbjct: 227 TVVLRA 232
>TAIR|locus:2151306 [details] [associations]
symbol:UPL4 "AT5G02880" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0016881 "acid-amino acid
ligase activity" evidence=IEA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0000151 "ubiquitin ligase complex" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50176
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0005622 GO:GO:0004842 EMBL:AL162973
GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021 HSSP:Q9UEP9 KO:K10590
HOGENOM:HOG000238707 IPI:IPI00545962 PIR:T48309 RefSeq:NP_195908.1
UniGene:At.46354 ProteinModelPortal:Q9LYZ7 SMR:Q9LYZ7 PaxDb:Q9LYZ7
PRIDE:Q9LYZ7 EnsemblPlants:AT5G02880.1 GeneID:831758
KEGG:ath:AT5G02880 TAIR:At5g02880 InParanoid:Q9LYZ7 OMA:YGSCDSD
PhylomeDB:Q9LYZ7 ProtClustDB:CLSN2687525 Genevestigator:Q9LYZ7
Uniprot:Q9LYZ7
Length = 1502
Score = 188 (71.2 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 43/126 (34%), Positives = 69/126 (54%)
Query: 125 KAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTGFPVKQVVPALITLLSMDHNFD 184
K + LL++L D QL + E+C++L E++L+ + P L+ L ++N D
Sbjct: 110 KLKSLLLNLTGETDPSGQLSRLTELCEVLSFSTEESLSSVMANMLSPVLVKLAKHENNAD 169
Query: 185 MMNNACRALTYMMEALPRSSAVVL--DAVPTFLEKLQVIQCMDVAEQSLTALEMLSRRHS 242
+M A RA+TY+ + P S ++ D +P ++L I+ +DVAEQ L ALE +SR
Sbjct: 170 IMLLAIRAITYLCDVYPPSVEFLVRHDTIPALCQRLLTIEYLDVAEQCLQALEKISRDEP 229
Query: 243 KAILQA 248
A L A
Sbjct: 230 VACLNA 235
>ASPGD|ASPL0000044576 [details] [associations]
symbol:hulC species:162425 "Emericella nidulans"
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACD01000027 EMBL:BN001307 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590 OMA:LNMNGCS
OrthoDB:EOG49GPQP RefSeq:XP_659350.1 ProteinModelPortal:Q5BCI4
EnsemblFungi:CADANIAT00008393 GeneID:2875694 KEGG:ani:AN1746.2
HOGENOM:HOG000216026 Uniprot:Q5BCI4
Length = 1820
Score = 153 (58.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 44/123 (35%), Positives = 71/123 (57%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTG-FPVKQVVPALITLLSM-- 179
+++ + +L +L+ D QL A+ E+ +L++ NED L+G F V L++L+
Sbjct: 225 SSRLRDILQNLRMKDDPSVQLIALQELSDLLLVSNEDNLSGQFSPDPYVKELVSLMQPND 284
Query: 180 --DHNFDMMNNACRALTYMMEALPRSSAVVL--DAVPTFLEKLQVIQCMDVAEQSLTALE 235
+ N ++M ACR L +MEAL S A V+ AVP +KL IQ +D+AEQ+L+ L
Sbjct: 285 FGEENPEIMLLACRCLANLMEALRGSVANVVYGGAVPILCQKLLDIQFIDLAEQALSTLA 344
Query: 236 MLS 238
+S
Sbjct: 345 KIS 347
Score = 47 (21.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 39 TLYGAPGG-GKAATLYAQSGMSAG 61
+L+GA G G +TL A SGM +G
Sbjct: 200 SLFGARGSLGLQSTLRALSGMMSG 223
>UNIPROTKB|Q5BCI4 [details] [associations]
symbol:AN1746.2 "Ubiquitin-protein ligase Ufd4, putative
(AFU_orthologue; AFUA_6G08880)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50237 SMART:SM00119 GO:GO:0005634 GO:GO:0005737
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AACD01000027 EMBL:BN001307 GO:GO:0004842 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 KO:K10590 OMA:LNMNGCS
OrthoDB:EOG49GPQP RefSeq:XP_659350.1 ProteinModelPortal:Q5BCI4
EnsemblFungi:CADANIAT00008393 GeneID:2875694 KEGG:ani:AN1746.2
HOGENOM:HOG000216026 Uniprot:Q5BCI4
Length = 1820
Score = 153 (58.9 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 44/123 (35%), Positives = 71/123 (57%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTG-FPVKQVVPALITLLSM-- 179
+++ + +L +L+ D QL A+ E+ +L++ NED L+G F V L++L+
Sbjct: 225 SSRLRDILQNLRMKDDPSVQLIALQELSDLLLVSNEDNLSGQFSPDPYVKELVSLMQPND 284
Query: 180 --DHNFDMMNNACRALTYMMEALPRSSAVVL--DAVPTFLEKLQVIQCMDVAEQSLTALE 235
+ N ++M ACR L +MEAL S A V+ AVP +KL IQ +D+AEQ+L+ L
Sbjct: 285 FGEENPEIMLLACRCLANLMEALRGSVANVVYGGAVPILCQKLLDIQFIDLAEQALSTLA 344
Query: 236 MLS 238
+S
Sbjct: 345 KIS 347
Score = 47 (21.6 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 39 TLYGAPGG-GKAATLYAQSGMSAG 61
+L+GA G G +TL A SGM +G
Sbjct: 200 SLFGARGSLGLQSTLRALSGMMSG 223
>UNIPROTKB|Q7S5Y8 [details] [associations]
symbol:NCU09866 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0004842 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 KO:K10590 OrthoDB:EOG49GPQP HOGENOM:HOG000216026
EMBL:AABX02000100 RefSeq:XP_960183.1 UniGene:Ncr.15912
ProteinModelPortal:Q7S5Y8 EnsemblFungi:EFNCRT00000009767
GeneID:3876330 KEGG:ncr:NCU09866 OMA:NIVETLY Uniprot:Q7S5Y8
Length = 1933
Score = 171 (65.3 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 47/133 (35%), Positives = 77/133 (57%)
Query: 123 ATKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTG-FPVKQVVPALITLL---- 177
+ + ++++ L+ D QL A+ E+ +L+M NED L+G QVVP L+ L+
Sbjct: 270 SAQVRKIMADLKRKDDPSMQLMALHELSTLLLMTNEDQLSGHLQPDQVVPELVALMRPNE 329
Query: 178 -SMDHNFDMMNNACRALTYMMEALPRS-SAVVLD-AVPTFLEKLQVIQCMDVAEQSLTAL 234
+ + N ++ ACR L +MEALP S SA+V AV EKL I +D+AEQ+L+ L
Sbjct: 330 ITGEENPEIQLVACRCLANLMEALPGSTSALVYGGAVHILCEKLLQISFIDLAEQALSTL 389
Query: 235 EMLSRRHSKAILQ 247
E +S + ++++
Sbjct: 390 EKISVEYPTSVMR 402
>UNIPROTKB|G4NHH2 [details] [associations]
symbol:MGG_03841 "E3 ubiquitin-protein ligase UPL3"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016567 GO:GO:0005622
GO:GO:0004842 GO:GO:0043581 EMBL:CM001236 SUPFAM:SSF56204 KO:K10590
RefSeq:XP_003720049.1 ProteinModelPortal:G4NHH2
EnsemblFungi:MGG_03841T0 GeneID:2677343 KEGG:mgr:MGG_03841
Uniprot:G4NHH2
Length = 1923
Score = 165 (63.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 45/132 (34%), Positives = 76/132 (57%)
Query: 124 TKAQQLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTG-FPVKQVVPALITLLSM--- 179
++ + L+ +L D QL A+ ++ ++L++ NED L+G F +V L+ L+
Sbjct: 249 SRLRSLMANLSNKEDPSVQLIALQDLSEILLVSNEDNLSGHFSPDALVKELVALMQPHEI 308
Query: 180 --DHNFDMMNNACRALTYMMEALPRSSAVVL--DAVPTFLEKLQVIQCMDVAEQSLTALE 235
+ N ++M ACR L +MEALP S A V+ AVP +KL I +D+AEQ+L+ LE
Sbjct: 309 TGEENPEIMLLACRCLANLMEALPPSVANVVYGGAVPVLCQKLLEISFIDLAEQALSTLE 368
Query: 236 MLSRRHSKAILQ 247
+S + +I++
Sbjct: 369 KISYEYPASIVR 380
>UNIPROTKB|Q75DK8 [details] [associations]
symbol:AGOS_ABR013W "ABR013Wp" species:284811 "Ashbya
gossypii ATCC 10895" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119 GO:GO:0005634
GO:GO:0005737 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0004842 GO:GO:0042787 EMBL:AE016815 GenomeReviews:AE016815_GR
SUPFAM:SSF56204 KO:K10590 HOGENOM:HOG000142004 OrthoDB:EOG49GPQP
RefSeq:NP_982959.2 STRING:Q75DK8 EnsemblFungi:AAS50783
GeneID:4619051 KEGG:ago:AGOS_ABR013W Uniprot:Q75DK8
Length = 1424
Score = 115 (45.5 bits), Expect = 0.00031, P = 0.00031
Identities = 43/129 (33%), Positives = 63/129 (48%)
Query: 128 QLLVSLQAIGDEDQQLQA--VVEMCQMLVMGNEDTLTGF-PVKQVVPALITLLS---MDH 181
Q LV+ ED + A + E+ + L+M N P +++ A+I +L +
Sbjct: 144 QTLVANVVAAAEDPYVAAESLREINEQLLMLNPLAAERVVPQGELLLAIIDVLRDERLQG 203
Query: 182 NFDMMNNACRALTYMMEALPR--SSAVVLDAVPTFLEKLQVIQCMDVAEQSLTALEMLSR 239
+ ACR L M E P SSAV D +PT +KL I +D+AEQ L LE +SR
Sbjct: 204 ELQLQLIACRCLYNMFEMNPEMVSSAVEKDVIPTLRKKLAEISYIDLAEQVLETLEYISR 263
Query: 240 RHSKAILQA 248
K IL++
Sbjct: 264 LLGKEILES 272
>SGD|S000001493 [details] [associations]
symbol:UFD4 "Ubiquitin-protein ligase (E3)" species:4932
"Saccharomyces cerevisiae" [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0006513 "protein monoubiquitination"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA;TAS]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA;IPI] [GO:0016874 "ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005622 "intracellular" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR016024 PROSITE:PS50237 SMART:SM00119
SGD:S000001493 GO:GO:0005739 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BK006944 GO:GO:0004842 GO:GO:0000209
GO:GO:0042787 EMBL:S53418 GO:GO:0006513 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00530000063470 KO:K04709
RefSeq:NP_012917.3 GeneID:853861 KEGG:sce:YKL008C
RefSeq:NP_012915.3 GeneID:853859 KEGG:sce:YKL010C KO:K10590
EMBL:Z28010 PIR:S30015 ProteinModelPortal:P33202 SMR:P33202
DIP:DIP-4873N IntAct:P33202 MINT:MINT-542956 STRING:P33202
PaxDb:P33202 PeptideAtlas:P33202 EnsemblFungi:YKL010C CYGD:YKL010c
HOGENOM:HOG000142004 OMA:NRILDFR OrthoDB:EOG49GPQP NextBio:975106
Genevestigator:P33202 GermOnline:YKL010C Uniprot:P33202
Length = 1483
Score = 114 (45.2 bits), Expect = 0.00044, P = 0.00044
Identities = 32/139 (23%), Positives = 73/139 (52%)
Query: 119 SEDTATKAQQLLVSLQAIGD--EDQQL--QAVVEMCQMLVMGNEDTLTGF-PVKQVVPAL 173
S +++ + +++ ++ G+ ED + +++ E+ + ++M N+ + P++ ++ +
Sbjct: 162 SAESSARNERISKLIENTGNASEDPYIAMESLKELSENILMMNQMVVDRIIPMETLIGNI 221
Query: 174 ITLLS---MDHNFDMMNNACRALTYMMEALPRSSAVVLD--AVPTFLEKLQVIQCMDVAE 228
+LS + ++ ACR + + E P S ++ +D +P KL I +D+AE
Sbjct: 222 AAILSDKILREELELQMQACRCMYNLFEVCPESISIAVDEHVIPILQGKLVEISYIDLAE 281
Query: 229 QSLTALEMLSRRHSKAILQ 247
Q L +E +SR H + IL+
Sbjct: 282 QVLETVEYISRVHGRDILK 300
>POMBASE|SPAC12B10.01c [details] [associations]
symbol:SPAC12B10.01c "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0043234 "protein complex"
evidence=NAS] Pfam:PF00632 InterPro:IPR000569 InterPro:IPR016024
PROSITE:PS50237 SMART:SM00119 PomBase:SPAC12B10.01c GO:GO:0005829
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0004842 SUPFAM:SSF56204
eggNOG:COG5021 KO:K10590 OrthoDB:EOG49GPQP PIR:T37568 PIR:T38617
RefSeq:NP_594633.2 ProteinModelPortal:Q10435
EnsemblFungi:SPAC12B10.01c.1 GeneID:2541575 KEGG:spo:SPAC12B10.01c
OMA:HGSTNER NextBio:20802669 Uniprot:Q10435
Length = 1647
Score = 114 (45.2 bits), Expect = 0.00049, P = 0.00049
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 128 QLLVSLQAIGDEDQQLQAVVEMCQMLVMGNEDTLTG-FPVKQVVPALITLLSMDHNFD-- 184
+LL ++ D Q+ ++ E+ + M ED L G F + A +LS N+D
Sbjct: 372 RLLEGIKDFSDPTVQMLSLQELSEAFAMSTEDMLVGLFSTDSYIAAFSEILS-GRNYDFG 430
Query: 185 -----MMNNACRALTYMMEALPRSSAVVLDA--VPTFLEKLQVIQCMDVAEQSLTALEML 237
+M + ++ MMEALP A + + V E++ +Q +D+AEQ+L LE L
Sbjct: 431 EVSIQLMLSCTTCVSNMMEALPLCMAKIAYSPIVRILCERMFDMQYIDIAEQALGVLERL 490
Query: 238 SRRHSKAILQ 247
S+ IL+
Sbjct: 491 SKDFGICILE 500
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.128 0.348 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 249 173 0.00097 108 3 10 22 0.41 32
31 0.48 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 22
No. of states in DFA: 591 (63 KB)
Total size of DFA: 174 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.95u 0.09s 21.04t Elapsed: 00:00:08
Total cpu time: 20.95u 0.09s 21.04t Elapsed: 00:00:08
Start: Thu Aug 15 11:16:33 2013 End: Thu Aug 15 11:16:41 2013