BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11983
(66 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6PA06|ATLA2_MOUSE Atlastin-2 OS=Mus musculus GN=Atl2 PE=1 SV=1
Length = 583
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWDNRLVKLNQDFKEVTVRGQV 55
MG AL +L TWAY++YSGE +IG ID +A T+W+ L L + E +R V
Sbjct: 508 MGLALTSLCTWAYVKYSGEFREIGTMIDQIAETLWEQVLKPLGDNLMEENIRQSV 562
>sp|Q8NHH9|ATLA2_HUMAN Atlastin-2 OS=Homo sapiens GN=ATL2 PE=1 SV=2
Length = 583
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWDNRLVKLNQDFKEVTVRGQV 55
MG AL+ L TWAY++YSGE +IG ID +A T+W+ L L + E +R V
Sbjct: 508 MGLALIFLCTWAYVKYSGEFREIGTVIDQIAETLWEQVLKPLGDNLMEENIRQSV 562
>sp|Q9VC57|ATLAS_DROME Atlastin OS=Drosophila melanogaster GN=atl PE=1 SV=1
Length = 541
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG ALLTL WAYIRYSGE++D G K+DD A +W+
Sbjct: 456 MGVALLTLALWAYIRYSGELSDFGGKLDDFATLLWE 491
>sp|Q95LN3|ATLA2_MACFA Atlastin-2 OS=Macaca fascicularis GN=ATL2 PE=2 SV=1
Length = 565
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWDNRLVKLNQDFKEVTVRGQV 55
MG AL L TWAY++YSGE +IG ID +A T+W+ L L + E +R V
Sbjct: 490 MGLALTFLCTWAYVKYSGEFREIGTMIDQIAETLWEQVLKPLGDNLMEENIRQSV 544
>sp|Q6GN29|ATLA2_XENLA Atlastin-2 OS=Xenopus laevis GN=atl2 PE=2 SV=1
Length = 569
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWDNRLVKLNQDFKEVTVRGQV 55
MG LL+ TWAY++YSGE ++G ID +A +W+ L L+ + E +R V
Sbjct: 496 MGLTLLSFCTWAYVKYSGEFRELGTLIDQIAEIIWEQLLKPLSDNLMEDNIRQTV 550
>sp|Q8BH66|ATLA1_MOUSE Atlastin-1 OS=Mus musculus GN=Atl1 PE=1 SV=1
Length = 558
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG L+TL TWAYIRYSGE ++G ID VA +WD
Sbjct: 481 MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWD 516
>sp|Q6PST4|ATLA1_RAT Atlastin-1 OS=Rattus norvegicus GN=Atl1 PE=1 SV=1
Length = 558
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG L+TL TWAYIRYSGE ++G ID VA +WD
Sbjct: 481 MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWD 516
>sp|Q58D72|ATLA1_BOVIN Atlastin-1 OS=Bos taurus GN=ATL1 PE=2 SV=2
Length = 558
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG L+TL TWAYIRYSGE ++G ID VA +WD
Sbjct: 481 MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWD 516
>sp|Q60HD2|ATLA1_MACFA Atlastin-1 OS=Macaca fascicularis GN=ATL1 PE=2 SV=1
Length = 558
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG L+TL TWAYIRYSGE ++G ID VA +WD
Sbjct: 481 MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWD 516
>sp|Q5R4P1|ATLA1_PONAB Atlastin-1 OS=Pongo abelii GN=ATL1 PE=2 SV=2
Length = 558
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG L+TL TWAYIRYSGE ++G ID VA +WD
Sbjct: 481 MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWD 516
>sp|Q8WXF7|ATLA1_HUMAN Atlastin-1 OS=Homo sapiens GN=ATL1 PE=1 SV=1
Length = 558
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 26/36 (72%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTVWD 36
MG L+TL TWAYIRYSGE ++G ID VA +WD
Sbjct: 481 MGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWD 516
>sp|Q91YH5|ATLA3_MOUSE Atlastin-3 OS=Mus musculus GN=Atl3 PE=2 SV=1
Length = 541
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTV 34
+G L+ L+TW YIRYSG+ ++G ID A V
Sbjct: 477 VGLLLIALLTWGYIRYSGQYRELGGAIDSGAAYV 510
>sp|Q0ZHH6|ATLA3_RAT Atlastin-3 OS=Rattus norvegicus GN=Atl3 PE=2 SV=2
Length = 541
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKIDDVANTV 34
+G L+ L+TW YIRYSG+ ++G ID A V
Sbjct: 477 VGLLLIALLTWGYIRYSGQYLELGGAIDSGAAYV 510
>sp|Q6DD88|ATLA3_HUMAN Atlastin-3 OS=Homo sapiens GN=ATL3 PE=1 SV=1
Length = 541
Score = 36.2 bits (82), Expect = 0.061, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 1 MGCALLTLITWAYIRYSGEMTDIGIKID 28
+G L+ L+TW YIRYSG+ ++G ID
Sbjct: 477 VGLLLIALLTWGYIRYSGQYRELGGAID 504
>sp|Q55F83|ENOB_DICDI Enolase B OS=Dictyostelium discoideum GN=enoB PE=3 SV=1
Length = 443
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 6 LTLITWAYIRYSGEMTDIGIKIDDVANTVWDNRLVKLNQDFKEV 49
LTL+ A I +SG I I ID A+ W+ + K + DFK +
Sbjct: 222 LTLLVDA-INHSGYQDVIKIGIDSAASEFWNPKTSKYDMDFKNI 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,893,457
Number of Sequences: 539616
Number of extensions: 683724
Number of successful extensions: 1999
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1984
Number of HSP's gapped (non-prelim): 16
length of query: 66
length of database: 191,569,459
effective HSP length: 38
effective length of query: 28
effective length of database: 171,064,051
effective search space: 4789793428
effective search space used: 4789793428
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)