RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11983
         (66 letters)



>d1knza_ e.34.1.1 (A:) NSP3 homodimer {Simian 11 rotavirus [TaxId:
           10923]}
          Length = 157

 Score = 23.4 bits (50), Expect = 2.7
 Identities = 8/28 (28%), Positives = 18/28 (64%)

Query: 39  LVKLNQDFKEVTVRGQVEINDQPVTKKL 66
           ++K  +  ++   RG+VE++D  V +K+
Sbjct: 130 IIKCTKLMRDKLERGEVEVDDSFVDEKM 157


>d3e7ma1 d.174.1.1 (A:77-497) Nitric oxide (NO) synthase oxygenase
           domain {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 421

 Score = 22.0 bits (47), Expect = 7.1
 Identities = 7/19 (36%), Positives = 8/19 (42%)

Query: 14  IRYSGEMTDIGIKIDDVAN 32
           IRY+G     G    D A 
Sbjct: 183 IRYAGYQMPDGTIRGDAAT 201


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0669    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 245,433
Number of extensions: 8491
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 2
Length of query: 66
Length of database: 2,407,596
Length adjustment: 35
Effective length of query: 31
Effective length of database: 1,927,046
Effective search space: 59738426
Effective search space used: 59738426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.0 bits)