Query psy11985
Match_columns 334
No_of_seqs 236 out of 1258
Neff 7.4
Searched_HMMs 29240
Date Fri Aug 16 15:40:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11985.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11985hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rb5_A Na/Ca exchange protein; 100.0 7E-45 2.4E-49 341.8 19.7 193 87-334 4-196 (298)
2 3us9_A Sodium/calcium exchange 100.0 3.7E-43 1.3E-47 329.3 24.6 206 91-334 8-215 (295)
3 3ead_A Na/Ca exchange protein; 100.0 2.1E-33 7.1E-38 235.6 16.6 135 90-279 2-136 (137)
4 3gin_A Sodium/calcium exchange 100.0 1.2E-30 4E-35 223.8 16.5 143 87-267 17-160 (160)
5 3e9t_A Na/Ca exchange protein; 100.0 1.1E-28 3.8E-33 200.4 16.8 94 92-185 2-95 (114)
6 3fso_A Integrin beta-4, GP150; 100.0 3.3E-28 1.1E-32 200.2 15.1 111 91-201 4-121 (123)
7 2qvk_A CBD2, sodium/calcium ex 99.9 4.3E-24 1.5E-28 186.7 13.6 100 88-187 1-101 (192)
8 2lt9_A Protein SLC8A3; NCX, NC 99.8 7.3E-26 2.5E-30 192.3 0.0 95 91-185 10-105 (157)
9 3us9_A Sodium/calcium exchange 99.9 1.3E-21 4.3E-26 183.2 17.7 146 44-189 66-238 (295)
10 3rb5_A Na/Ca exchange protein; 99.9 3.3E-22 1.1E-26 187.6 13.1 145 44-188 65-218 (298)
11 3gin_A Sodium/calcium exchange 99.8 3.7E-19 1.3E-23 152.3 9.8 85 250-334 12-97 (160)
12 2qvk_A CBD2, sodium/calcium ex 99.8 6.6E-19 2.3E-23 153.9 10.4 78 257-334 2-80 (192)
13 3fso_A Integrin beta-4, GP150; 99.8 1.9E-18 6.5E-23 141.8 10.4 76 259-334 4-79 (123)
14 3e9t_A Na/Ca exchange protein; 99.7 2.8E-17 9.5E-22 133.1 10.0 73 262-334 4-76 (114)
15 3ead_A Na/Ca exchange protein; 99.7 5E-17 1.7E-21 135.8 10.4 77 258-334 2-78 (137)
16 2lt9_A Protein SLC8A3; NCX, NC 99.5 1.2E-18 4.2E-23 147.8 0.0 77 258-334 9-86 (157)
17 3ubf_A Neural-cadherin; cell a 90.0 6.4 0.00022 36.0 14.1 103 101-220 114-227 (316)
18 3ubf_A Neural-cadherin; cell a 89.7 2.8 9.7E-05 38.4 11.4 135 157-298 89-249 (316)
19 2a4e_A Cadherin-11; dimer, cal 87.9 12 0.00042 32.1 13.7 51 170-220 66-120 (215)
20 3ubh_A Neural-cadherin; cell a 82.0 8.3 0.00028 36.7 10.5 18 191-208 203-220 (419)
21 3qrb_A Cadherin-1; cell adhesi 77.2 33 0.0011 29.1 12.3 50 170-219 68-120 (213)
22 3lnd_A CDH6 protein, cadherin 70.4 27 0.00091 29.6 9.6 50 170-219 65-118 (207)
23 3q2w_A Cadherin-2; cell adhesi 70.1 26 0.00088 34.7 10.7 37 248-284 207-245 (559)
24 4ay0_A Chaperone protein CAF1M 65.4 64 0.0022 27.9 11.0 86 95-183 14-102 (218)
25 2a62_A Cadherin-8; extracellul 64.3 83 0.0028 28.6 12.2 141 157-302 89-257 (322)
26 3ppe_A Vascular endothelial ca 61.7 23 0.00078 30.0 7.3 41 244-284 84-127 (203)
27 3q2v_A Cadherin-1; cell adhesi 61.2 1E+02 0.0035 30.2 13.0 51 170-220 290-345 (550)
28 3q2v_A Cadherin-1; cell adhesi 60.7 1.3E+02 0.0044 29.4 19.0 51 247-299 204-261 (550)
29 1q55_A EP-cadherin, C-cadherin 59.8 1.1E+02 0.0036 32.2 13.4 50 170-219 336-388 (880)
30 3mvs_A Cadherin-23, otocadheri 57.1 87 0.003 26.3 10.6 49 170-219 72-121 (210)
31 1l3w_A EP-cadherin, C-cadherin 56.7 1.5E+02 0.0051 28.9 13.6 111 97-219 114-239 (546)
32 3qrb_A Cadherin-1; cell adhesi 50.7 46 0.0016 28.1 7.5 71 214-284 51-131 (213)
33 2a62_A Cadherin-8; extracellul 48.4 1.5E+02 0.0051 26.8 11.1 51 170-220 173-228 (322)
34 2ee0_A Protocadherin-9; Ca dom 47.7 39 0.0013 25.6 5.9 25 196-220 2-27 (114)
35 2co7_B SAFB chaperone, putativ 45.8 1.4E+02 0.0049 25.6 10.9 89 92-183 11-100 (221)
36 2qvi_A Cadherin-2; beta barrel 38.9 61 0.0021 27.5 6.4 110 98-220 3-121 (215)
37 3q48_A Chaperone CUPB2; IG fol 36.3 2.2E+02 0.0077 25.0 10.2 87 93-182 28-120 (257)
38 1l3w_A EP-cadherin, C-cadherin 36.0 1.8E+02 0.0062 28.3 10.1 69 214-284 57-137 (546)
39 3k5r_A Cadherin 13; mouse, str 34.8 87 0.003 26.4 6.7 92 192-283 19-130 (218)
40 1klf_A FIMC chaperone, chapero 33.7 2.2E+02 0.0074 24.1 11.9 86 95-182 2-89 (205)
41 2a4e_A Cadherin-11; dimer, cal 31.6 80 0.0027 26.8 5.9 38 247-284 90-130 (215)
42 3klq_A Putative pilus anchorin 28.5 2.3E+02 0.0078 22.7 8.6 29 249-277 39-72 (141)
43 4dqa_A Uncharacterized protein 27.6 1.3E+02 0.0046 27.7 7.1 75 107-181 25-114 (355)
44 3q2w_A Cadherin-2; cell adhesi 27.1 4.4E+02 0.015 25.6 14.5 49 170-220 293-351 (559)
45 3ppe_A Vascular endothelial ca 26.3 2.8E+02 0.0095 22.9 17.1 102 100-219 5-116 (203)
46 3ubh_A Neural-cadherin; cell a 23.8 3.5E+02 0.012 25.1 9.5 37 248-284 95-136 (419)
47 1l4i_A SFAE protein; periplasm 23.7 3.3E+02 0.011 22.9 11.4 86 95-182 2-89 (206)
48 1p3q_Q VPS9P, vacuolar protein 22.9 1.1E+02 0.0039 20.4 4.0 29 13-41 7-35 (54)
49 1q55_A EP-cadherin, C-cadherin 21.8 2.3E+02 0.0079 29.6 8.3 72 213-284 205-286 (880)
No 1
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=100.00 E-value=7e-45 Score=341.79 Aligned_cols=193 Identities=50% Similarity=0.794 Sum_probs=173.6
Q ss_pred cCCCCceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEee
Q psy11985 87 LGGLTGARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVID 166 (334)
Q Consensus 87 ~~d~~~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~Iid 166 (334)
.+|++++.|+|+++.|+|.|++|.+.|+|.|+|++.++++|.|.|.+|||.+|.||.+.+|+|+|+||+++|+|.|+|+|
T Consensus 4 ~ddd~~g~i~F~~~~y~V~E~~g~v~vtV~R~g~~~~~vtV~y~T~~GTA~ag~Dy~~~~gtl~F~~Get~kti~V~I~d 83 (298)
T 3rb5_A 4 EEADDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVID 83 (298)
T ss_dssp -------CEEESSSEEEEETTSCCEECCEEECSCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEECCEECBCC
T ss_pred CCCCCceEEEEeCCEEEEecCceEEEEEEEEECCCCccEEEEEEeeCCccCCCCCccccceEEEECCCceEEEEEEEEeC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccCeEEEEEEecccCccccCCcceEEEEecCCCCCccceeceEEEEecccceEEEeeeeecceEEEeccCCeeecC
Q psy11985 167 DDVFEEDEYFFVHLTKVKDAKLVAPSSATVMILDDDHAGSFGFLETSVTIAESVGIVKELWSTRHGVVHLTKVKDAKLVA 246 (334)
Q Consensus 167 D~~~E~dE~F~v~L~~~~~~~~~~~~~~~vtI~ddd~~~~~~f~~~~~~v~E~~G~v~v~~~~~~~~v~l~~~~~~~lg~ 246 (334)
|.++|++|+|+|.|++|.+ ++.||.
T Consensus 84 D~~~E~dEtF~v~Ls~p~~-------------------------------------------------------~a~lg~ 108 (298)
T 3rb5_A 84 DDVFEEDECFYIRLFNPSE-------------------------------------------------------GVKLAV 108 (298)
T ss_dssp CSSCCCCEEEEEEEECCCT-------------------------------------------------------TCCBCS
T ss_pred CCCccCcEEEEEEEeCCCC-------------------------------------------------------CcEECC
Confidence 9999999999999999754 567899
Q ss_pred CceEEEEEeCCCCCceEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccCCCCccccceEEEEcCCCeEE
Q psy11985 247 PSSATVMILDDDHAGSFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKAGTHYVQTEGALIFHNEETSY 326 (334)
Q Consensus 247 ~~~atVtI~ddd~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~g~Dy~~~~g~ltF~~ge~~k 326 (334)
++.++|+|+|||++|+|+|.++.|+|.|+.|.+.++|.|+++..+.++|+|.|.+|||++|.||.+.+|+|+|+|||++|
T Consensus 109 ~~~atvtI~ddD~~g~~~f~~~~~~V~E~~g~~~~~V~Rs~~~~g~vtV~~~T~dGTA~~g~Dy~~~~gtltF~~Get~k 188 (298)
T 3rb5_A 109 PMIATVMILDDDHAGIFAFTDSVFEITESVGRFELKVMRYSGARGTVIVPYWTENDTATESKDYEGARGELVFENNESEK 188 (298)
T ss_dssp CSEEEEEEECCCCCCEEECSCSEEEECTTCCCEEEEEEEESCCCSCEEEEEEEEEC-----CCSCCCEEEEEECTTCCEE
T ss_pred CceEEEEEeccccccccccccccEEeecCCceEEEEEEEEecCCCCEEEEEEecCCccCCCccceecccEEEECCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeeC
Q psy11985 327 FYNRRSVD 334 (334)
Q Consensus 327 ~i~I~Iid 334 (334)
+|.|+|+|
T Consensus 189 ti~V~Iid 196 (298)
T 3rb5_A 189 FIDLFILE 196 (298)
T ss_dssp EEEEC---
T ss_pred EEEEEEeC
Confidence 99999986
No 2
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=100.00 E-value=3.7e-43 Score=329.25 Aligned_cols=206 Identities=44% Similarity=0.695 Sum_probs=183.2
Q ss_pred CceEEEEecceEEEEcCCeEEEEEEEEec-CCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEeeCCC
Q psy11985 91 TGARIFFKPQYYTVLENVGEFEVVVAREG-DVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVIDDDV 169 (334)
Q Consensus 91 ~~~~v~F~~~~~~v~E~~g~v~v~V~R~g-~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~IidD~~ 169 (334)
..+.+.|++..|+|.|++|.+.|+|.|+| .+.++++|.|.|.+|||.+|.||.+.+|+|+|+||+++|+|+|.|+||.+
T Consensus 8 ~~~~~~f~~~~y~V~E~~G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~kti~V~IidD~~ 87 (295)
T 3us9_A 8 HVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGIIDDDI 87 (295)
T ss_dssp --CEEEESCSEEEEEGGGSCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCCCCEEEEECSSCCEEEEEECCCCCSS
T ss_pred ceeeEEecCCeEEEecCceEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccccceEEEECCCceEEEEEEEEeCCCc
Confidence 45789999999999999999999999997 58999999999999999999999999999999999999999999999999
Q ss_pred cccCeEEEEEEecccCccccCCcceEEEEecCCCCCccceeceEEEEecccceEEEeeeeecceEEEeccCCeeecCCce
Q psy11985 170 FEEDEYFFVHLTKVKDAKLVAPSSATVMILDDDHAGSFGFLETSVTIAESVGIVKELWSTRHGVVHLTKVKDAKLVAPSS 249 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~~~~~vtI~ddd~~~~~~f~~~~~~v~E~~G~v~v~~~~~~~~v~l~~~~~~~lg~~~~ 249 (334)
+|++|+|+|.|++|.....+. ...+|..+ . .+.++.||.++.
T Consensus 88 ~E~~EtF~v~Ls~~~~~~~~~---~d~~~~~~-------------------------------~----~~~~a~Lg~~~~ 129 (295)
T 3us9_A 88 FEEDKNFLVHLSNVKVSSEAS---EDGILEAN-------------------------------H----VSALACLGSPST 129 (295)
T ss_dssp CCCCEEEEEEEECCCCCCCC---------------------------------------------------CCCCCSCCE
T ss_pred ccCceEEEEEEecCccccccc---cccccccc-------------------------------c----CCcccccCCCce
Confidence 999999999999987532110 00000000 0 134788999999
Q ss_pred EEEEEeCCCCCceEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccCC-CCccccceEEEEcCCCeEEEE
Q psy11985 250 ATVMILDDDHAGSFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKAG-THYVQTEGALIFHNEETSYFY 328 (334)
Q Consensus 250 atVtI~ddd~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~g-~Dy~~~~g~ltF~~ge~~k~i 328 (334)
|+|||+|||++|+|+|.++.|+|.|+.|.+.++|.|++++.+.++|+|.|.+|||++| .||.+.+|+|+|++||++|+|
T Consensus 130 atVtI~DdD~agv~sf~~~~~~V~E~~G~~~v~V~Rs~~~~g~VtV~y~T~~GTA~~g~~DY~~~sgtLtF~~Get~kti 209 (295)
T 3us9_A 130 ATVTIFDDDHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTI 209 (295)
T ss_dssp EEEEEECCCCCCEEEESCSEEEEESCSSEEEEEEEEESCCCSCEEEEEEEECCSSCTTTTSEECCEEEEEECTTCCCEEE
T ss_pred eEEEEcccccccccccCCCeEEEecCCCeEEEEEEEEcCCCccEEEEEEecCCCccCCcccccccceEEEecCCceEEEE
Confidence 9999999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred EEEeeC
Q psy11985 329 NRRSVD 334 (334)
Q Consensus 329 ~I~Iid 334 (334)
+|+|+|
T Consensus 210 ~V~Iid 215 (295)
T 3us9_A 210 SVKVID 215 (295)
T ss_dssp EEEECC
T ss_pred EEEEcC
Confidence 999987
No 3
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=100.00 E-value=2.1e-33 Score=235.59 Aligned_cols=135 Identities=55% Similarity=0.894 Sum_probs=105.8
Q ss_pred CCceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEeeCCC
Q psy11985 90 LTGARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVIDDDV 169 (334)
Q Consensus 90 ~~~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~IidD~~ 169 (334)
++++.|+|+++.|.|.|++|.+.|+|.|+|++.++++|.|.|.+|||.+|.||.+.+|+|+|+|||++|+|.|.|+||.+
T Consensus 2 d~~~~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~ 81 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDV 81 (137)
T ss_dssp ---CEEEESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCCSS
T ss_pred CCCEEEEEcCCEEEEECCCeEEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEECCCceEEEEEEEEecCCc
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCeEEEEEEecccCccccCCcceEEEEecCCCCCccceeceEEEEecccceEEEeeeeecceEEEeccCCeeecCCce
Q psy11985 170 FEEDEYFFVHLTKVKDAKLVAPSSATVMILDDDHAGSFGFLETSVTIAESVGIVKELWSTRHGVVHLTKVKDAKLVAPSS 249 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~~~~~vtI~ddd~~~~~~f~~~~~~v~E~~G~v~v~~~~~~~~v~l~~~~~~~lg~~~~ 249 (334)
+|.+|+|+|.|++|.+ ++.||.++.
T Consensus 82 ~E~~E~F~v~L~~p~~-------------------------------------------------------~a~lg~~~~ 106 (137)
T 3ead_A 82 FEEDECFYIRLFNPSE-------------------------------------------------------GVKLAVPMI 106 (137)
T ss_dssp CCCCEEEEEEEECCCT-------------------------------------------------------TCEECSCSE
T ss_pred ccCcEEEEEEEECCCC-------------------------------------------------------CcEECCCcE
Confidence 9999999999999743 567888888
Q ss_pred EEEEEeCCCCCceEEEeeceEEEEeeeeEE
Q psy11985 250 ATVMILDDDHAGSFGFLETSVTIAESVGMY 279 (334)
Q Consensus 250 atVtI~ddd~~g~~~F~~~~~~V~E~~g~v 279 (334)
|+|+|+|||++|+|+|.++.|.|.|+.|.+
T Consensus 107 atvtI~ddD~~g~~~f~~~~~~V~E~~G~~ 136 (137)
T 3ead_A 107 ATVMILDDDHAGIFAFTDSVFEITESVGRF 136 (137)
T ss_dssp EEEEEECCC---------------------
T ss_pred EEEEEECCCCCCEEEECCCcEEEeccccEE
Confidence 899998888888899999899999988865
No 4
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=99.97 E-value=1.2e-30 Score=223.75 Aligned_cols=143 Identities=45% Similarity=0.707 Sum_probs=110.6
Q ss_pred cCCCCceEEEEecceEEEEcCCeEEEEEEEEec-CCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEe
Q psy11985 87 LGGLTGARIFFKPQYYTVLENVGEFEVVVAREG-DVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVI 165 (334)
Q Consensus 87 ~~d~~~~~v~F~~~~~~v~E~~g~v~v~V~R~g-~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~Ii 165 (334)
++|++++.|+|+++.|+|.|++|.+.|+|.|++ .+.++++|.|+|.+|||.+|.||.+.+|+|+|+|||++|+|.|+|+
T Consensus 17 ~ddd~~g~i~F~~~~y~V~E~~G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~k~i~V~Ii 96 (160)
T 3gin_A 17 QGPGPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEIRVGII 96 (160)
T ss_dssp ----CEEEEEESCSEEEEETTSSEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEEEEEBC
T ss_pred ecCCCccEEEEeCCEEEEEcCcEEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEcCCcEEEEEEEEEE
Confidence 478899999999999999999999999999995 4579999999999999999999999999999999999999999999
Q ss_pred eCCCcccCeEEEEEEecccCccccCCcceEEEEecCCCCCccceeceEEEEecccceEEEeeeeecceEEEeccCCeeec
Q psy11985 166 DDDVFEEDEYFFVHLTKVKDAKLVAPSSATVMILDDDHAGSFGFLETSVTIAESVGIVKELWSTRHGVVHLTKVKDAKLV 245 (334)
Q Consensus 166 dD~~~E~dE~F~v~L~~~~~~~~~~~~~~~vtI~ddd~~~~~~f~~~~~~v~E~~G~v~v~~~~~~~~v~l~~~~~~~lg 245 (334)
||.++|.+|+|+|.|++|..+..+... . ++. .+. .+.++.||
T Consensus 97 dD~~~E~~EtF~v~Ls~p~~~~~g~~~-~--~~~-------------------------------~~~----~~~~a~LG 138 (160)
T 3gin_A 97 DDDIFEEDKNFLVHLSNVKVSSEASED-G--ILE-------------------------------ANH----VSALACLG 138 (160)
T ss_dssp CCSCCCCCEEEEEEEEEEEC------------------------------------------------------CEEEEC
T ss_pred CCCCccCceEEEEEECCCccccccccc-c--ccc-------------------------------ccc----cCCCceec
Confidence 999999999999999999753211000 0 000 000 13478999
Q ss_pred CCceEEEEEeCCCCCceEEEee
Q psy11985 246 APSSATVMILDDDHAGSFGFLE 267 (334)
Q Consensus 246 ~~~~atVtI~ddd~~g~~~F~~ 267 (334)
.++.|+|||+|||++|+|+|++
T Consensus 139 ~~s~atVtI~DdD~aGi~~F~~ 160 (160)
T 3gin_A 139 SPSTATVTIFDDDHAGIFTFEE 160 (160)
T ss_dssp SCSEEEEEEECCCC--------
T ss_pred CCcEEEEEEEcCCCCCEEEeCC
Confidence 9999999999999999999974
No 5
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=99.96 E-value=1.1e-28 Score=200.42 Aligned_cols=94 Identities=55% Similarity=0.930 Sum_probs=90.7
Q ss_pred ceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEeeCCCcc
Q psy11985 92 GARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVIDDDVFE 171 (334)
Q Consensus 92 ~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~IidD~~~E 171 (334)
+-.|+|+++.|+|.|++|.+.|+|.|+|++.++++|.|.|.+|||.+|.||.+.+|+|+|+|||++|+|.|+|+||.++|
T Consensus 2 ~i~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~~E 81 (114)
T 3e9t_A 2 FIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVIDDDVFE 81 (114)
T ss_dssp CEEEEESSSEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCCSSCC
T ss_pred eEEEEEeCCEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEEeCCcEEEEEEEEEEcCCCcc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCeEEEEEEecccC
Q psy11985 172 EDEYFFVHLTKVKD 185 (334)
Q Consensus 172 ~dE~F~v~L~~~~~ 185 (334)
++|+|+|.|++|.+
T Consensus 82 ~~E~F~v~L~~p~~ 95 (114)
T 3e9t_A 82 EDECFYIRLFNPSE 95 (114)
T ss_dssp CCEEEEEEEECCCT
T ss_pred CCEEEEEEEECCCC
Confidence 99999999999743
No 6
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=99.96 E-value=3.3e-28 Score=200.16 Aligned_cols=111 Identities=28% Similarity=0.426 Sum_probs=93.6
Q ss_pred CceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEeeCCCc
Q psy11985 91 TGARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVIDDDVF 170 (334)
Q Consensus 91 ~~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~IidD~~~ 170 (334)
..|.|+|+++.|.|.|++|.+.|+|.|.|+..+.++|.|+|.+|||.+|.||.+.+|+|+|+|||++|+|.|+|+||..+
T Consensus 4 a~G~i~F~~~~y~V~E~~g~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F~~Get~k~i~V~I~dD~~~ 83 (123)
T 3fso_A 4 MRDVVSFEQPEFSVSRGDQVARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLFQPGEAWKELQVKLLELQEV 83 (123)
T ss_dssp CCSEEEESCSEEEEEGGGSEEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCCC---
T ss_pred CceEEEEeCCEEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEECCCCeEEEEEEEEECCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999977
Q ss_pred cc------CeEEEEEEecccCc-cccCCcceEEEEecC
Q psy11985 171 EE------DEYFFVHLTKVKDA-KLVAPSSATVMILDD 201 (334)
Q Consensus 171 E~------dE~F~v~L~~~~~~-~~~~~~~~~vtI~dd 201 (334)
|. +|+|+|.|++|.++ .++.++.++|||+||
T Consensus 84 E~~~e~~~~E~F~v~L~~p~~ga~lg~~~~atVtI~Dd 121 (123)
T 3fso_A 84 DSLLRGRQVRRFHVQLSNPKFGAHLGQPHSTTIIIRDP 121 (123)
T ss_dssp ------CCEEEEEEEEEEEETTCEECSCSEEEEEEECC
T ss_pred hhccccCCCeEEEEEEeCCCCCcEECCCCEEEEEEEcC
Confidence 75 99999999999863 233333444444443
No 7
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=99.91 E-value=4.3e-24 Score=186.70 Aligned_cols=100 Identities=31% Similarity=0.526 Sum_probs=94.5
Q ss_pred CCCCceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccC-CCCccccceEEEEcCCCeEEEEEEEEee
Q psy11985 88 GGLTGARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQA-GSDYVGAAGKIVFQPGELEQRIRLQVID 166 (334)
Q Consensus 88 ~d~~~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~-g~Dy~~~~g~l~F~~get~k~i~v~Iid 166 (334)
+|++.|.|+|+++.|+|.|++|.+.|+|.|+|++.++++|.|.|.||||.+ |.||.+.+|+|+|+|||++|+|.|+|+|
T Consensus 1 ~DD~~Gv~sF~~~~y~V~E~~G~v~vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F~~GEt~KtI~I~Iid 80 (192)
T 2qvk_A 1 GPGHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVID 80 (192)
T ss_dssp ---CCCEEEESCSEEEEETTCCEEEEEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEECTTCCEEEEEEEBCC
T ss_pred CCCCceEEEEcCCeEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEECCCCeEEEEEEEEeC
Confidence 367889999999999999999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred CCCcccCeEEEEEEecccCcc
Q psy11985 167 DDVFEEDEYFFVHLTKVKDAK 187 (334)
Q Consensus 167 D~~~E~dE~F~v~L~~~~~~~ 187 (334)
|+++|.+|+|+|.|++|.+..
T Consensus 81 D~~~E~dEtF~V~Lsnp~~~~ 101 (192)
T 2qvk_A 81 DEEYEKNKTFFLEIGEPRLVE 101 (192)
T ss_dssp CSSCCSSEEEEEEECCCEECC
T ss_pred CCcccCcEEEEEEEeCCccCc
Confidence 999999999999999998753
No 8
>2lt9_A Protein SLC8A3; NCX, NCX3, NACA exchanger, CBD, CBD2, calcium binding domain binding protein; NMR {Mus musculus}
Probab=99.84 E-value=7.3e-26 Score=192.29 Aligned_cols=95 Identities=33% Similarity=0.535 Sum_probs=92.1
Q ss_pred CceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccC-CCCccccceEEEEcCCCeEEEEEEEEeeCCC
Q psy11985 91 TGARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQA-GSDYVGAAGKIVFQPGELEQRIRLQVIDDDV 169 (334)
Q Consensus 91 ~~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~-g~Dy~~~~g~l~F~~get~k~i~v~IidD~~ 169 (334)
..|.+.|..+.|.|.|++|.+.|+|.|+|++.++++|.|.|.+|||.+ |.||.+.+|+|+|+|||++|+|.|+|+||.+
T Consensus 10 ~~~~~~~~~~~y~V~E~~G~v~vtV~R~gg~~g~vsV~y~T~dGTA~a~G~DY~~~~GtL~F~~GEt~KtI~I~IidD~~ 89 (157)
T 2lt9_A 10 HAGIFTFECDTIHVSESIGVMEVKVLRTSGARGTVIVPFRTVEGTAKGGGEDFEDAYGELEFKNDETVKTIRVKIVDEEE 89 (157)
Confidence 468899999999999999999999999999999999999999999999 7999999999999999999999999999999
Q ss_pred cccCeEEEEEEecccC
Q psy11985 170 FEEDEYFFVHLTKVKD 185 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~ 185 (334)
+|++|+|+|.|++|..
T Consensus 90 ~E~dEtF~V~LsnP~~ 105 (157)
T 2lt9_A 90 YERQENFFIALGEPKW 105 (157)
Confidence 9999999999999985
No 9
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=99.88 E-value=1.3e-21 Score=183.25 Aligned_cols=146 Identities=23% Similarity=0.371 Sum_probs=117.7
Q ss_pred HHHhcCCcceEEEEEeeeeeccc----ceeeeccCCCC-----------------CC----CCCCCCcc-CCCCceEEEE
Q psy11985 44 EIMKRVPKSRAFYRIQASRNIMG----SFQSARKEKPQ-----------------HR----PTSPLPEL-GGLTGARIFF 97 (334)
Q Consensus 44 ~~~~~~~~sr~~yri~a~r~~~g----~~~i~~~~~~~-----------------~~----~~~~~~~~-~d~~~~~v~F 97 (334)
.+.|.++++...++|.....-.- .+.+.+..+.. .+ +..+...+ +|+..+.|+|
T Consensus 66 tl~F~~Get~kti~V~IidD~~~E~~EtF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~DdD~agv~sf 145 (295)
T 3us9_A 66 TVVFKPGETQKEIRVGIIDDDIFEEDKNFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFDDDHAGIFTF 145 (295)
T ss_dssp EEEECSSCCEEEEEECCCCCSSCCCCEEEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEECCCCCCEEEE
T ss_pred EEEECCCceEEEEEEEEeCCCcccCceEEEEEEecCccccccccccccccccCCcccccCCCceeEEEEccccccccccc
Confidence 45677888888888886553211 13343333321 11 11111223 5666799999
Q ss_pred ecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCC-CCccccceEEEEcCCCeEEEEEEEEeeCCCcccCeEE
Q psy11985 98 KPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAG-SDYVGAAGKIVFQPGELEQRIRLQVIDDDVFEEDEYF 176 (334)
Q Consensus 98 ~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g-~Dy~~~~g~l~F~~get~k~i~v~IidD~~~E~dE~F 176 (334)
.++.|.|.|+.|.+.++|.|+++..+.++|.|.|.+|||.+| .||.+.+|+|+|+||+++|+|.|+|+||.++|++|+|
T Consensus 146 ~~~~~~V~E~~G~~~v~V~Rs~~~~g~VtV~y~T~~GTA~~g~~DY~~~sgtLtF~~Get~kti~V~IidD~~~E~dEtF 225 (295)
T 3us9_A 146 EEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVIDDEEYEKNKTF 225 (295)
T ss_dssp SCSEEEEESCSSEEEEEEEEESCCCSCEEEEEEEECCSSCTTTTSEECCEEEEEECTTCCCEEEEEEECCCSCCCSCEEE
T ss_pred CCCeEEEecCCCeEEEEEEEEcCCCccEEEEEEecCCCccCCcccccccceEEEecCCceEEEEEEEEcCCCCcCCceEE
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EEEEecccCcccc
Q psy11985 177 FVHLTKVKDAKLV 189 (334)
Q Consensus 177 ~v~L~~~~~~~~~ 189 (334)
+|.|++|.++.++
T Consensus 226 ~V~Ls~p~~a~lg 238 (295)
T 3us9_A 226 FLEIGEPRLVEMS 238 (295)
T ss_dssp EEEECCCEECCC-
T ss_pred EEEEeCCcccccc
Confidence 9999999987765
No 10
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=99.87 E-value=3.3e-22 Score=187.61 Aligned_cols=145 Identities=26% Similarity=0.337 Sum_probs=104.3
Q ss_pred HHHhcCCcceEEEEEeeeeeccc----ceeeeccCCCCCC----CCCCCCcc-CCCCceEEEEecceEEEEcCCeEEEEE
Q psy11985 44 EIMKRVPKSRAFYRIQASRNIMG----SFQSARKEKPQHR----PTSPLPEL-GGLTGARIFFKPQYYTVLENVGEFEVV 114 (334)
Q Consensus 44 ~~~~~~~~sr~~yri~a~r~~~g----~~~i~~~~~~~~~----~~~~~~~~-~d~~~~~v~F~~~~~~v~E~~g~v~v~ 114 (334)
.+.|.++++.+.++|.....-.- .+.+.+..+...+ +..+...+ +++..+.|+|.++.|+|.|+.|.+.++
T Consensus 65 tl~F~~Get~kti~V~I~dD~~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~ddD~~g~~~f~~~~~~V~E~~g~~~~~ 144 (298)
T 3rb5_A 65 LLSFPPGVDEQRFRIEVIDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILDDDHAGIFAFTDSVFEITESVGRFELK 144 (298)
T ss_dssp EEEECTTCCEECCEECBCCCSSCCCCEEEEEEEECCCTTCCBCSCSEEEEEEECCCCCCEEECSCSEEEECTTCCCEEEE
T ss_pred EEEECCCceEEEEEEEEeCCCCccCcEEEEEEEeCCCCCcEECCCceEEEEEeccccccccccccccEEeecCCceEEEE
Confidence 45577888888888876543211 1444444443322 11112233 556679999999999999999999999
Q ss_pred EEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEeeCCCcccCeEEEEEEecccCccc
Q psy11985 115 VAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVIDDDVFEEDEYFFVHLTKVKDAKL 188 (334)
Q Consensus 115 V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~IidD~~~E~dE~F~v~L~~~~~~~~ 188 (334)
|.|+|+..+.++|.|.|.+|||.+|.||.+.+|+|+|+||+++|+|.|+|+||.++|++|+|+|.|++|.++..
T Consensus 145 V~Rs~~~~g~vtV~~~T~dGTA~~g~Dy~~~~gtltF~~Get~kti~V~IidD~~~E~dEtF~v~Ls~p~~~~~ 218 (298)
T 3rb5_A 145 VMRYSGARGTVIVPYWTENDTATESKDYEGARGELVFENNESEKFIDLFILEESSYEKDVSFKVHIGEPRLAPD 218 (298)
T ss_dssp EEEESCCCSCEEEEEEEEEC-----CCSCCCEEEEEECTTCCEEEEEEC---------CEEEEEEECCCEECTT
T ss_pred EEEEecCCCCEEEEEEecCCccCCCccceecccEEEECCCCEEEEEEEEEeCCCcccCceEEEEEEcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987654
No 11
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=99.78 E-value=3.7e-19 Score=152.31 Aligned_cols=85 Identities=28% Similarity=0.374 Sum_probs=73.6
Q ss_pred EEEEEeCCCCCceEEEeeceEEEEeeeeEEEEEEEEecCC-CccEEEEEEecCCCccCCCCccccceEEEEcCCCeEEEE
Q psy11985 250 ATVMILDDDHAGSFGFLETSVTIAESVGMYELEVLRSCGA-RGTVEVGYKTYDDTAKAGTHYVQTEGALIFHNEETSYFY 328 (334)
Q Consensus 250 atVtI~ddd~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~-~g~v~V~~~t~~gtA~~g~Dy~~~~g~ltF~~ge~~k~i 328 (334)
..|+|+|||..|.|+|+++.|+|.|+.|.+.|+|.|++|. .+.++|+|.|.+|||++|.||.+.+|+|+|+|||++|+|
T Consensus 12 ~~~~i~ddd~~g~i~F~~~~y~V~E~~G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~~gtl~F~~Get~k~i 91 (160)
T 3gin_A 12 LEVLFQGPGPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGETQKEI 91 (160)
T ss_dssp ---------CEEEEEESCSEEEEETTSSEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEE
T ss_pred EEEEEecCCCccEEEEeCCEEEEEcCcEEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccccceEEEEcCCcEEEEE
Confidence 5799999999999999999999999999999999999776 799999999999999999999999999999999999999
Q ss_pred EEEeeC
Q psy11985 329 NRRSVD 334 (334)
Q Consensus 329 ~I~Iid 334 (334)
.|+|+|
T Consensus 92 ~V~Iid 97 (160)
T 3gin_A 92 RVGIID 97 (160)
T ss_dssp EEEBCC
T ss_pred EEEEEC
Confidence 999987
No 12
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=99.78 E-value=6.6e-19 Score=153.90 Aligned_cols=78 Identities=41% Similarity=0.654 Sum_probs=74.7
Q ss_pred CCCCceEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccC-CCCccccceEEEEcCCCeEEEEEEEeeC
Q psy11985 257 DDHAGSFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKA-GTHYVQTEGALIFHNEETSYFYNRRSVD 334 (334)
Q Consensus 257 dd~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~-g~Dy~~~~g~ltF~~ge~~k~i~I~Iid 334 (334)
||++|+|+|+++.|+|.|+.|.+.|+|.|++|+.+.|+|+|.|.+|||++ |.||.+.+|+|+|+|||++|+|.|+|+|
T Consensus 2 DD~~Gv~sF~~~~y~V~E~~G~v~vtV~R~gg~~g~VsV~y~T~dGTA~agG~DY~~~sGtL~F~~GEt~KtI~I~Iid 80 (192)
T 2qvk_A 2 PGHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVID 80 (192)
T ss_dssp --CCCEEEESCSEEEEETTCCEEEEEEEEESCCCSCEEEEEEEEESSSCTTTTSBCCCEEEEEECTTCCEEEEEEEBCC
T ss_pred CCCceEEEEcCCeEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCceeccCcCccccceEEEECCCCeEEEEEEEEeC
Confidence 67889999999999999999999999999999999999999999999999 8999999999999999999999999987
No 13
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=99.76 E-value=1.9e-18 Score=141.80 Aligned_cols=76 Identities=21% Similarity=0.358 Sum_probs=74.0
Q ss_pred CCceEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccCCCCccccceEEEEcCCCeEEEEEEEeeC
Q psy11985 259 HAGSFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKAGTHYVQTEGALIFHNEETSYFYNRRSVD 334 (334)
Q Consensus 259 ~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~g~Dy~~~~g~ltF~~ge~~k~i~I~Iid 334 (334)
.+|+|+|+++.|+|.|+.|.+.|+|.|+++..+.++|.|.|.+|||++|.||.+.+|+|+|+|||++|+|.|+|+|
T Consensus 4 a~G~i~F~~~~y~V~E~~g~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~~g~l~F~~Get~k~i~V~I~d 79 (123)
T 3fso_A 4 MRDVVSFEQPEFSVSRGDQVARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPVEGELLFQPGEAWKELQVKLLE 79 (123)
T ss_dssp CCSEEEESCSEEEEEGGGSEEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCC
T ss_pred CceEEEEeCCEEEEEcCceEEEEEEEEeCCCCceEEEEEEeeCCcEeCCccccccceEEEECCCCeEEEEEEEEEC
Confidence 4599999999999999999999999999999999999999999999999999999999999999999999999987
No 14
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=99.71 E-value=2.8e-17 Score=133.10 Aligned_cols=73 Identities=29% Similarity=0.393 Sum_probs=71.0
Q ss_pred eEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccCCCCccccceEEEEcCCCeEEEEEEEeeC
Q psy11985 262 SFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKAGTHYVQTEGALIFHNEETSYFYNRRSVD 334 (334)
Q Consensus 262 ~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~g~Dy~~~~g~ltF~~ge~~k~i~I~Iid 334 (334)
.|+|+++.|+|.|+.|.+.|+|.|+|++.+.++|.|.|.+|||++|.||.+.+|+|+|+|||++|+|.|+|+|
T Consensus 4 ~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~d 76 (114)
T 3e9t_A 4 RMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVID 76 (114)
T ss_dssp EEEESSSEEEEETTCCEEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCC
T ss_pred EEEEeCCEEEEEcCCeEEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEcceEEEEeCCcEEEEEEEEEEc
Confidence 4799999999999999999999999999999999999999999999999999999999999999999999986
No 15
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=99.70 E-value=5e-17 Score=135.79 Aligned_cols=77 Identities=29% Similarity=0.376 Sum_probs=72.6
Q ss_pred CCCceEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccCCCCccccceEEEEcCCCeEEEEEEEeeC
Q psy11985 258 DHAGSFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKAGTHYVQTEGALIFHNEETSYFYNRRSVD 334 (334)
Q Consensus 258 d~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~g~Dy~~~~g~ltF~~ge~~k~i~I~Iid 334 (334)
|..+.|+|+++.|+|.|+.|.+.|+|.|+|++.+.++|.|.|.+|||++|.||.+.+|+|+|+|||++|+|.|+|+|
T Consensus 2 d~~~~i~F~~~~y~V~E~~g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~~g~l~F~~Get~k~i~V~I~d 78 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENCGEFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGRKGLLSFPPGVDEQRFRIEVID 78 (137)
T ss_dssp ---CEEEESSCEEEEEGGGCEEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCCEEEEEECTTCCEEEEEEEBCC
T ss_pred CCCEEEEEcCCEEEEECCCeEEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEeeEEEEECCCceEEEEEEEEec
Confidence 45689999999999999999999999999999999999999999999999999999999999999999999999986
No 16
>2lt9_A Protein SLC8A3; NCX, NCX3, NACA exchanger, CBD, CBD2, calcium binding domain binding protein; NMR {Mus musculus}
Probab=99.53 E-value=1.2e-18 Score=147.78 Aligned_cols=77 Identities=42% Similarity=0.652 Sum_probs=74.5
Q ss_pred CCCceEEEeeceEEEEeeeeEEEEEEEEecCCCccEEEEEEecCCCccC-CCCccccceEEEEcCCCeEEEEEEEeeC
Q psy11985 258 DHAGSFGFLETSVTIAESVGMYELEVLRSCGARGTVEVGYKTYDDTAKA-GTHYVQTEGALIFHNEETSYFYNRRSVD 334 (334)
Q Consensus 258 d~~g~~~F~~~~~~V~E~~g~v~v~V~R~~g~~g~v~V~~~t~~gtA~~-g~Dy~~~~g~ltF~~ge~~k~i~I~Iid 334 (334)
.++|+|.|.++.|.|.|+.|.+.|+|.|+||+.+.++|+|.|.+|||++ |.||.+.+|+|+|+|||++|+|.|+|+|
T Consensus 9 ~~~~~~~~~~~~y~V~E~~G~v~vtV~R~gg~~g~vsV~y~T~dGTA~a~G~DY~~~~GtL~F~~GEt~KtI~I~Iid 86 (157)
T 2lt9_A 9 HHAGIFTFECDTIHVSESIGVMEVKVLRTSGARGTVIVPFRTVEGTAKGGGEDFEDAYGELEFKNDETVKTIRVKIVD 86 (157)
Confidence 3579999999999999999999999999999999999999999999999 7999999999999999999999999987
No 17
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=90.02 E-value=6.4 Score=35.96 Aligned_cols=103 Identities=13% Similarity=0.150 Sum_probs=53.1
Q ss_pred eEEEEcCC--eEEEEEEEEe-cCCCceEEEEEEeecCCccCCCCcc--ccceEEEEcCCCeEEEEEEEEeeCCCcccCeE
Q psy11985 101 YYTVLENV--GEFEVVVARE-GDVSGTVTVEYATEDGTAQAGSDYV--GAAGKIVFQPGELEQRIRLQVIDDDVFEEDEY 175 (334)
Q Consensus 101 ~~~v~E~~--g~v~v~V~R~-g~~~~~v~V~~~t~~GTA~~g~Dy~--~~~g~l~F~~get~k~i~v~IidD~~~E~dE~ 175 (334)
...|.|+. |+.-..|.-. .+.... +.|....|... .-|. +..|.|+... ---+|....
T Consensus 114 ~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~--~~F~Id~~tG~i~~~~-------------~lD~e~~~~ 176 (316)
T 3ubf_A 114 QAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTG--GRFEVDERSGVVRTRG-------------TDLFQLDME 176 (316)
T ss_dssp EEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESS--SCEEECTTTCEEEECS-------------SCCCCTTCE
T ss_pred EEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCC--CEEEEECCccEEEECC-------------cCCcccCcE
Confidence 44689984 5554444333 332222 77877654321 2232 2345544332 112455555
Q ss_pred EEEEEecccCcc------ccCCcceEEEEecCCCCCccceeceEEEEeccc
Q psy11985 176 FFVHLTKVKDAK------LVAPSSATVMILDDDHAGSFGFLETSVTIAESV 220 (334)
Q Consensus 176 F~v~L~~~~~~~------~~~~~~~~vtI~ddd~~~~~~f~~~~~~v~E~~ 220 (334)
|.+.+..-.++. ......++|+|.|+|.+|.|.-....+.|.|+.
T Consensus 177 y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~dnDn~P~F~~~~y~~~v~En~ 227 (316)
T 3ubf_A 177 YVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQ 227 (316)
T ss_dssp EEEEEEEEESCC-------CBCCCEEEEEEESCCCCEESSSSEEEEEETTC
T ss_pred EEEEEEEEeCCCCCCCccccceEEEEEEEEcCCCCCEEcCCCceEEEeCCC
Confidence 666665443321 223456778888888888766544455665543
No 18
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=89.69 E-value=2.8 Score=38.36 Aligned_cols=135 Identities=15% Similarity=0.138 Sum_probs=64.8
Q ss_pred EEEEEEEEee--CCCcccCeE---EEEEEecccCccccCCcceEEEEecCCCCCccce--e----ceEEEEecccceEEE
Q psy11985 157 EQRIRLQVID--DDVFEEDEY---FFVHLTKVKDAKLVAPSSATVMILDDDHAGSFGF--L----ETSVTIAESVGIVKE 225 (334)
Q Consensus 157 ~k~i~v~Iid--D~~~E~dE~---F~v~L~~~~~~~~~~~~~~~vtI~ddd~~~~~~f--~----~~~~~v~E~~G~v~v 225 (334)
...+.|.|.| |.-+.-... +.+.+.. +... +..-.+|.-.|.|....+.| . ...|.++...|.+.+
T Consensus 89 ~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~E--n~~~-gt~v~~v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~~tG~i~~ 165 (316)
T 3ubf_A 89 NQRVIILVKDVNDEPPYFINRPLPMQAVVQL--NAPP-NTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRT 165 (316)
T ss_dssp EEEEEEEEECTTCCCCEECCSSSSEEEEECT--TCCT-TCEEEECCEECSSTTCCEEEEEEEEESSSCEEECTTTCEEEE
T ss_pred eEEEEEEEEECCCCCCccCCCCCCEEEEEeC--CCCC-CCEEEEEEEECCCCCCceEEEEEeCCCCCEEEEECCccEEEE
Confidence 4667777765 555543321 3344432 1111 11223444555554332332 2 124677777787766
Q ss_pred eee--e---ecceEEEeccCC------eeecCCceEEEEEeCCCCCceEEEeec--eEEEEeee--eEEEEEEEEecCCC
Q psy11985 226 LWS--T---RHGVVHLTKVKD------AKLVAPSSATVMILDDDHAGSFGFLET--SVTIAESV--GMYELEVLRSCGAR 290 (334)
Q Consensus 226 ~~~--~---~~~~v~l~~~~~------~~lg~~~~atVtI~ddd~~g~~~F~~~--~~~V~E~~--g~v~v~V~R~~g~~ 290 (334)
... + ....+++.-..+ ..+-.....+|+|.|+|++|.| .+. ...|.|+. |+.-+.|.-.-.-.
T Consensus 166 ~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~dnDn~P~F--~~~~y~~~v~En~~~gt~v~~v~A~D~Dn 243 (316)
T 3ubf_A 166 RGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQF--YMPSYEAEIPENQKKDSDIISIKAKSFAD 243 (316)
T ss_dssp CSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEESCCCCEE--SSSSEEEEEETTCCTTCEEEECCEECTTC
T ss_pred CCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEcCCCCCEE--cCCCceEEEeCCCCCCCEEEEEEEEeCCC
Confidence 431 1 123344332211 1233345678888999998865 455 45678874 55555554433223
Q ss_pred ccEEEEEE
Q psy11985 291 GTVEVGYK 298 (334)
Q Consensus 291 g~v~V~~~ 298 (334)
+. |.|.
T Consensus 244 ~~--i~Y~ 249 (316)
T 3ubf_A 244 RE--IRYT 249 (316)
T ss_dssp CC--EEEE
T ss_pred CE--EEEE
Confidence 33 4444
No 19
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=87.89 E-value=12 Score=32.12 Aligned_cols=51 Identities=22% Similarity=0.180 Sum_probs=29.2
Q ss_pred cccCeEEEEEEecccCcc---ccCCcceEEEEecC-CCCCccceeceEEEEeccc
Q psy11985 170 FEEDEYFFVHLTKVKDAK---LVAPSSATVMILDD-DHAGSFGFLETSVTIAESV 220 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~---~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~~ 220 (334)
+|....|.+.+....++. +......+|+|.|- |.+|.|.-....++|.|+.
T Consensus 66 rE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~ 120 (215)
T 2a4e_A 66 REERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERS 120 (215)
T ss_dssp TTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTC
T ss_pred CccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCC
Confidence 455566766665433321 22334677888885 5577765444455665643
No 20
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=81.99 E-value=8.3 Score=36.74 Aligned_cols=18 Identities=17% Similarity=0.224 Sum_probs=11.7
Q ss_pred CcceEEEEecCCCCCccc
Q psy11985 191 PSSATVMILDDDHAGSFG 208 (334)
Q Consensus 191 ~~~~~vtI~ddd~~~~~~ 208 (334)
....+|+|.|+|.+|.|.
T Consensus 203 t~~v~I~V~dndn~P~F~ 220 (419)
T 3ubh_A 203 TPEERLSIVGGKRAPQFY 220 (419)
T ss_dssp CCCEEEEEEESCCCCEES
T ss_pred ceEEEEEEECCCCCCcee
Confidence 345677777777777654
No 21
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=77.24 E-value=33 Score=29.10 Aligned_cols=50 Identities=16% Similarity=0.157 Sum_probs=29.1
Q ss_pred cccCeEEEEEEecccCcc--ccCCcceEEEEecC-CCCCccceeceEEEEecc
Q psy11985 170 FEEDEYFFVHLTKVKDAK--LVAPSSATVMILDD-DHAGSFGFLETSVTIAES 219 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~--~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~ 219 (334)
+|....|.+.+.....+. .......+|+|.|- |.+|.|.-....++|.|+
T Consensus 68 rE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En 120 (213)
T 3qrb_A 68 REAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEG 120 (213)
T ss_dssp TTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETT
T ss_pred cccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECC
Confidence 465566666665433322 33345677888885 567776544445566554
No 22
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=70.40 E-value=27 Score=29.56 Aligned_cols=50 Identities=20% Similarity=0.163 Sum_probs=28.3
Q ss_pred cccCeEEEEEEecccCcc---ccCCcceEEEEecC-CCCCccceeceEEEEecc
Q psy11985 170 FEEDEYFFVHLTKVKDAK---LVAPSSATVMILDD-DHAGSFGFLETSVTIAES 219 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~---~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~ 219 (334)
+|....|.+.+....++. .......+|+|.|- |.+|.|.-....+.|.|+
T Consensus 65 rE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~ 118 (207)
T 3lnd_A 65 REEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEM 118 (207)
T ss_dssp GGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESS
T ss_pred cccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCC
Confidence 566666777665543321 33456788999995 567776655545566554
No 23
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=70.14 E-value=26 Score=34.66 Aligned_cols=37 Identities=14% Similarity=0.181 Sum_probs=20.7
Q ss_pred ceEEEEEeCC-CCCceEEEeeceEEEEeee-eEEEEEEE
Q psy11985 248 SSATVMILDD-DHAGSFGFLETSVTIAESV-GMYELEVL 284 (334)
Q Consensus 248 ~~atVtI~dd-d~~g~~~F~~~~~~V~E~~-g~v~v~V~ 284 (334)
..++|+|.|- |++|.|.-..-...|.|+. |.....|.
T Consensus 207 ~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~g~~v~~v~ 245 (559)
T 3q2w_A 207 ATAVITVTDVNDNPPEFTAMTFYGEVPENRVDVIVANLT 245 (559)
T ss_dssp EEEEEEEECCSCSCCEESSSEEEEEEESSCSSEEEEEEE
T ss_pred EEEEEEEEeCCCCCCccccccceeEecCCCCCcEEEEEE
Confidence 4566777776 5578653332234578873 44444443
No 24
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=65.36 E-value=64 Score=27.88 Aligned_cols=86 Identities=8% Similarity=0.054 Sum_probs=58.4
Q ss_pred EEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccC--CCCccccceEEEEcCCCeEEEEEEEEeeCCCccc
Q psy11985 95 IFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQA--GSDYVGAAGKIVFQPGELEQRIRLQVIDDDVFEE 172 (334)
Q Consensus 95 v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~--g~Dy~~~~g~l~F~~get~k~i~v~IidD~~~E~ 172 (334)
|......+...++...+.|.|.=.+ ..+.-|.-...+|.... ...|..+.-....+||+. +.++|.-..+.++..
T Consensus 14 v~l~~TRvIy~~~~k~~sl~l~N~~--~~p~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p~~~-q~lRI~~~~~~LP~D 90 (218)
T 4ay0_A 14 VTIGESRIIYPLDAAGVMVSVKNTQ--DYPVLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQ-NSLRIAQAGGVFPRD 90 (218)
T ss_dssp EEESCCEEEEETTCSCEEEEEECCS--SSCEEEEEEEECTTSCCCSSCSEEEESSEEEECTTCE-EEEEEEECSCCCCSS
T ss_pred EEECceEEEECCCCcEEEEEEEcCC--CCCEEEEEEEecCCCCccccCCEEECCCeEEeCCCCc-eEEEEEecCCCCCcC
Confidence 5555666667777777878876444 34555554455554433 234887888889999976 677777777788887
Q ss_pred CeE-EEEEEecc
Q psy11985 173 DEY-FFVHLTKV 183 (334)
Q Consensus 173 dE~-F~v~L~~~ 183 (334)
.|+ |++.+...
T Consensus 91 RESlf~lnv~eI 102 (218)
T 4ay0_A 91 KESLKWLCVKGI 102 (218)
T ss_dssp SCEEEEEEEEEE
T ss_pred cEEEEEEEEEec
Confidence 775 88888763
No 25
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=64.35 E-value=83 Score=28.58 Aligned_cols=141 Identities=18% Similarity=0.207 Sum_probs=65.7
Q ss_pred EEEEEEEEee--CCCcccC-eEEEEEEecccCccccCCcceEEEEecCCC-----CCcccee----ceEEEEecccceEE
Q psy11985 157 EQRIRLQVID--DDVFEED-EYFFVHLTKVKDAKLVAPSSATVMILDDDH-----AGSFGFL----ETSVTIAESVGIVK 224 (334)
Q Consensus 157 ~k~i~v~Iid--D~~~E~d-E~F~v~L~~~~~~~~~~~~~~~vtI~ddd~-----~~~~~f~----~~~~~v~E~~G~v~ 224 (334)
...+.|.|.| |..|+-. ..+.+.+..-.. .+ ..-.+|.-.|.|. .+.+.|. ...|.++...|.+.
T Consensus 89 ~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~--~g-t~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG~i~ 165 (322)
T 2a62_A 89 PSEFIIKVQDINDNAPEFLNGPYHATVPEMSI--LG-TSVTNVTATDADDPVYGNSAKLVYSILEGQPYFSIEPETAIIK 165 (322)
T ss_dssp EEEECEECCCCSCSCBCCSSSEEEEEECSSCC--TT-CBCCCCCCCBCSCSSSTTSSCEEEEEEECTTTEEECTTTCCEE
T ss_pred eEEEEEEEEecCCCCCccCCCceEEEEeCCCC--CC-CEEEEEEEEeCCCCCCCccEEEEEEEccCCCCEEEecCCCEEE
Confidence 3456666654 6666543 356666653221 11 1112333344442 1223332 12477777778776
Q ss_pred Ee---eeee---cceEEEeccC--Ce--eecCCceEEEEEeCC-CCCceEEEeec--eEEEEeee--eEEEEEEEEec-C
Q psy11985 225 EL---WSTR---HGVVHLTKVK--DA--KLVAPSSATVMILDD-DHAGSFGFLET--SVTIAESV--GMYELEVLRSC-G 288 (334)
Q Consensus 225 v~---~~~~---~~~v~l~~~~--~~--~lg~~~~atVtI~dd-d~~g~~~F~~~--~~~V~E~~--g~v~v~V~R~~-g 288 (334)
+. ..++ ...|++.-.. +. .+-.....+|+|.|- |++|.| .+. ...|.|+. |+.-..|.-+- .
T Consensus 166 ~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F--~~~~y~~~v~En~~~gt~v~~v~A~D~D 243 (322)
T 2a62_A 166 TALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKF--AQSLYHFSVPEDVVLGTAIGRVKANDQD 243 (322)
T ss_dssp ECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCC--SCSEEEEEECSCCSSCCEEEEEECCCSS
T ss_pred ecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCee--cCCCceeEeECCCCCCcEEEEEEEEeCC
Confidence 64 2222 2234433221 11 133345667777775 567864 444 44678874 56555554321 1
Q ss_pred CCccEEEEEEecCC
Q psy11985 289 ARGTVEVGYKTYDD 302 (334)
Q Consensus 289 ~~g~v~V~~~t~~g 302 (334)
....-.|.|.-.+|
T Consensus 244 ~g~n~~i~Y~i~~g 257 (322)
T 2a62_A 244 IGENAQSSYDIIDG 257 (322)
T ss_dssp CGGGTCCEEEEC--
T ss_pred CCCCceEEEEEECC
Confidence 11112466765554
No 26
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=61.67 E-value=23 Score=29.99 Aligned_cols=41 Identities=24% Similarity=0.164 Sum_probs=24.7
Q ss_pred ecCCceEEEEEeCC-CCCceEEEeeceEEEEeee--eEEEEEEE
Q psy11985 244 LVAPSSATVMILDD-DHAGSFGFLETSVTIAESV--GMYELEVL 284 (334)
Q Consensus 244 lg~~~~atVtI~dd-d~~g~~~F~~~~~~V~E~~--g~v~v~V~ 284 (334)
+-.....+|+|.|- |++|.|.-..-...|.|+. |+....|.
T Consensus 84 ~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~ 127 (203)
T 3ppe_A 84 LEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVT 127 (203)
T ss_dssp CSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECC
T ss_pred ccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEE
Confidence 44445678888885 6688653333345678874 55555554
No 27
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=61.19 E-value=1e+02 Score=30.19 Aligned_cols=51 Identities=22% Similarity=0.352 Sum_probs=30.0
Q ss_pred cccCeEEEEEEecccCcc-----ccCCcceEEEEecCCCCCccceeceEEEEeccc
Q psy11985 170 FEEDEYFFVHLTKVKDAK-----LVAPSSATVMILDDDHAGSFGFLETSVTIAESV 220 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~-----~~~~~~~~vtI~ddd~~~~~~f~~~~~~v~E~~ 220 (334)
+|....|.+.+..-.++. .....+++|+|+|-+++|.|.-....+.|.|+.
T Consensus 290 ~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND~P~f~~~~~~~~v~E~~ 345 (550)
T 3q2v_A 290 FEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNEAPIFMPAERRVEVPEDF 345 (550)
T ss_dssp TTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCCCCEESSSSCEEEEETTC
T ss_pred ccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCCCCeEcCcceEEEEecCC
Confidence 566666666665433321 122446778888865577765555567777764
No 28
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=60.65 E-value=1.3e+02 Score=29.42 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=26.4
Q ss_pred CceEEEEEeCC-CCCceEEEeece--EEEEee-eeEEEEEEE---EecCCCccEEEEEEe
Q psy11985 247 PSSATVMILDD-DHAGSFGFLETS--VTIAES-VGMYELEVL---RSCGARGTVEVGYKT 299 (334)
Q Consensus 247 ~~~atVtI~dd-d~~g~~~F~~~~--~~V~E~-~g~v~v~V~---R~~g~~g~v~V~~~t 299 (334)
....+|+|+|- |++|. |.+.. ..|.|+ .|.....|. ...|..+.+.+.|.-
T Consensus 204 t~~v~I~V~DvNDn~P~--F~~~~y~~~V~En~~g~~v~~v~a~D~D~~~n~~~~~~ysi 261 (550)
T 3q2v_A 204 TAKAVITVKDINDNAPV--FNPSTYQGQVPENEVNARIATLKVTDDDAPNTPAWKAVYTV 261 (550)
T ss_dssp EEEEEEEEECCSCSCCE--ESSSEEEEEEESSCSSCCCEEECEECCSCTTSTTTCEEEEE
T ss_pred EEEEEEEecccCCCCCE--EecceeEEEEecCCCCCEEEEEEEEECCCCCCCcEEEEEEE
Confidence 34566777775 66786 45554 457786 233323332 223344445555553
No 29
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=59.82 E-value=1.1e+02 Score=32.19 Aligned_cols=50 Identities=18% Similarity=0.145 Sum_probs=31.6
Q ss_pred cccCeEEEEEEecccCc--cccCCcceEEEEecC-CCCCccceeceEEEEecc
Q psy11985 170 FEEDEYFFVHLTKVKDA--KLVAPSSATVMILDD-DHAGSFGFLETSVTIAES 219 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~--~~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~ 219 (334)
+|....|.+.+..-.++ .+....+++|+|.|- |.+|.|.-.....+|.|+
T Consensus 336 rE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 388 (880)
T 1q55_A 336 REKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN 388 (880)
T ss_dssp TTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS
T ss_pred HHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC
Confidence 56666677766543332 233456788999996 557876655555677776
No 30
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=57.07 E-value=87 Score=26.30 Aligned_cols=49 Identities=22% Similarity=0.222 Sum_probs=26.9
Q ss_pred cccCeEEEEEEecccCccccCCcceEEEEecC-CCCCccceeceEEEEecc
Q psy11985 170 FEEDEYFFVHLTKVKDAKLVAPSSATVMILDD-DHAGSFGFLETSVTIAES 219 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~ 219 (334)
+|....|.+.+....++.. ...+++|+|.|- |.+|.|.-....+.|.|+
T Consensus 72 ~E~~~~y~l~v~a~D~~~~-~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~ 121 (210)
T 3mvs_A 72 RETKSEFTVEFSVSDHQGV-ITRKVNIQVGDVNDNAPTFHNQPYSVRIPEN 121 (210)
T ss_dssp TTTCCEEEEEEEEECSSCE-EEEEEEEEEECCCCCCCEECSCSEEEEEETT
T ss_pred CcccceEEEEEEEEeCCCC-EEEEEEEEEEeCCCCCCcCCCceEEEEEECC
Confidence 4555556666554333221 234567888885 557766544445566554
No 31
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=56.74 E-value=1.5e+02 Score=28.94 Aligned_cols=111 Identities=17% Similarity=0.145 Sum_probs=57.8
Q ss_pred Eecce--EEEEcCC--eEEEEEEEEe-cCCC---ceEEEEEEeecCCcc--CCCCcc--ccceEEEEcCCCeEEEEEEEE
Q psy11985 97 FKPQY--YTVLENV--GEFEVVVARE-GDVS---GTVTVEYATEDGTAQ--AGSDYV--GAAGKIVFQPGELEQRIRLQV 164 (334)
Q Consensus 97 F~~~~--~~v~E~~--g~v~v~V~R~-g~~~---~~v~V~~~t~~GTA~--~g~Dy~--~~~g~l~F~~get~k~i~v~I 164 (334)
|.... ..|.|+. |+.-..|.-. .+.. ....|.|+..++... ...-|. +..|.|.... ..
T Consensus 114 F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~---------~~ 184 (546)
T 1l3w_A 114 FTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIG---------TG 184 (546)
T ss_dssp ESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECS---------CC
T ss_pred ecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEec---------cC
Confidence 55554 4789985 6654555332 2221 123467776655432 111222 1234443211 01
Q ss_pred eeCCCcccCeEEEEEEecccCc--cccCCcceEEEEecC-CCCCccceeceEEEEecc
Q psy11985 165 IDDDVFEEDEYFFVHLTKVKDA--KLVAPSSATVMILDD-DHAGSFGFLETSVTIAES 219 (334)
Q Consensus 165 idD~~~E~dE~F~v~L~~~~~~--~~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~ 219 (334)
+ -+|....|.+.+..-.++ .+....+++|+|.|- |.+|.|.-......|.|+
T Consensus 185 L---D~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 239 (546)
T 1l3w_A 185 L---DREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN 239 (546)
T ss_dssp C---CTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS
T ss_pred C---CcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC
Confidence 2 245556677766644332 233456788999996 557876655555677776
No 32
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=50.67 E-value=46 Score=28.12 Aligned_cols=71 Identities=15% Similarity=0.169 Sum_probs=37.0
Q ss_pred EEEecccceEEEeee--ee---cceEEEec--cCCeeecCCceEEEEEeCC-CCCceEEEeeceEEEEeee--eEEEEEE
Q psy11985 214 VTIAESVGIVKELWS--TR---HGVVHLTK--VKDAKLVAPSSATVMILDD-DHAGSFGFLETSVTIAESV--GMYELEV 283 (334)
Q Consensus 214 ~~v~E~~G~v~v~~~--~~---~~~v~l~~--~~~~~lg~~~~atVtI~dd-d~~g~~~F~~~~~~V~E~~--g~v~v~V 283 (334)
|.++...|.+.+... ++ ...+++.- ..+..+-.....+|+|.|- |++|.|.-..-...|.|+. |+..+.|
T Consensus 51 F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v 130 (213)
T 3qrb_A 51 FIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKV 130 (213)
T ss_dssp EEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEEC
T ss_pred EEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEE
Confidence 667777777665421 11 22333322 2222333345577788875 6678653322345678874 5555555
Q ss_pred E
Q psy11985 284 L 284 (334)
Q Consensus 284 ~ 284 (334)
.
T Consensus 131 ~ 131 (213)
T 3qrb_A 131 S 131 (213)
T ss_dssp C
T ss_pred E
Confidence 4
No 33
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=48.44 E-value=1.5e+02 Score=26.80 Aligned_cols=51 Identities=22% Similarity=0.244 Sum_probs=29.1
Q ss_pred cccCeEEEEEEecccCcc----ccCCcceEEEEecC-CCCCccceeceEEEEeccc
Q psy11985 170 FEEDEYFFVHLTKVKDAK----LVAPSSATVMILDD-DHAGSFGFLETSVTIAESV 220 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~----~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~~ 220 (334)
+|....|.+.+..-.++. +....+++|+|.|- |.+|.|.-....+.|.|+.
T Consensus 173 ~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~ 228 (322)
T 2a62_A 173 REAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDV 228 (322)
T ss_dssp GGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCC
T ss_pred cccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCC
Confidence 455566666665443332 23355677888885 5577765444455666653
No 34
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.69 E-value=39 Score=25.62 Aligned_cols=25 Identities=20% Similarity=0.080 Sum_probs=14.1
Q ss_pred EEEecC-CCCCccceeceEEEEeccc
Q psy11985 196 VMILDD-DHAGSFGFLETSVTIAESV 220 (334)
Q Consensus 196 vtI~dd-d~~~~~~f~~~~~~v~E~~ 220 (334)
++|+|- |.+|.|.-..-.++|.|+.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~ 27 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENA 27 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCC
Confidence 356664 5577765444445665543
No 35
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=45.82 E-value=1.4e+02 Score=25.56 Aligned_cols=89 Identities=8% Similarity=0.090 Sum_probs=62.9
Q ss_pred ceEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEEeeCCCcc
Q psy11985 92 GARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQVIDDDVFE 171 (334)
Q Consensus 92 ~~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~IidD~~~E 171 (334)
.+-|.+....+...|+...+.|.|.=.+. .+.-|.-...+|......+|..+.-....+||+. +.++|.-..+.++.
T Consensus 11 ~A~v~i~~TRvIy~~~~k~~sl~l~N~~~--~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~-q~lRI~~~~~~lP~ 87 (221)
T 2co7_B 11 LFSVKLGATRVIYHAGTAGATLSVSNPQN--YPILVQSSVKAADKSSPAPFLVMPPLFRLEANQQ-SQLRIVRTGGDMPT 87 (221)
T ss_dssp EEECEESCSEEEEETTSSCEEEEEECCSS--SCEEEEEEEEETTSSSBCSEEEESSEEEECTTCE-EEEEEEECCCCCCS
T ss_pred eEEEEEcceEEEEcCCCCEEEEEEEcCCC--CcEEEEEEEecCCCCccCCEEEeCCEEEECCCCc-eEEEEEECCCCCCC
Confidence 45677788888888888888888864443 3555544445554444567888888899999977 66777666677887
Q ss_pred cCe-EEEEEEecc
Q psy11985 172 EDE-YFFVHLTKV 183 (334)
Q Consensus 172 ~dE-~F~v~L~~~ 183 (334)
..| .|++.+...
T Consensus 88 DrEslf~lnv~eI 100 (221)
T 2co7_B 88 DRETLQWVCIKAV 100 (221)
T ss_dssp SSCEEEEEEEEEE
T ss_pred CceEEEEEEeecC
Confidence 766 788888763
No 36
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=38.95 E-value=61 Score=27.54 Aligned_cols=110 Identities=15% Similarity=0.134 Sum_probs=53.8
Q ss_pred ecceEEEEcCCe-EEEEEEEE-ecCCCceEEEEEEeecCCccC--CCCccc--cceEEEEcCCCeEEEEEEEEeeCCCcc
Q psy11985 98 KPQYYTVLENVG-EFEVVVAR-EGDVSGTVTVEYATEDGTAQA--GSDYVG--AAGKIVFQPGELEQRIRLQVIDDDVFE 171 (334)
Q Consensus 98 ~~~~~~v~E~~g-~v~v~V~R-~g~~~~~v~V~~~t~~GTA~~--g~Dy~~--~~g~l~F~~get~k~i~v~IidD~~~E 171 (334)
....++|.||.. .+-..|.. ..+......|.|+..++.+.. ..-|.- ..|.|+.. .---+|
T Consensus 3 ~~~~~~V~En~~g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~-------------~~LDrE 69 (215)
T 2qvi_A 3 VIPPINLPENSRGPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVT-------------KPLDRE 69 (215)
T ss_dssp CCCCEEEESSCCCCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEEC-------------SCCCTT
T ss_pred ccCcEEEcCCCCCCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEEC-------------cccCcc
Confidence 345678999863 22112221 122222345788877655421 112221 23433221 112245
Q ss_pred cCeEEEEEEecccCcc--ccCCcceEEEEecC-CCCCccceeceEEEEeccc
Q psy11985 172 EDEYFFVHLTKVKDAK--LVAPSSATVMILDD-DHAGSFGFLETSVTIAESV 220 (334)
Q Consensus 172 ~dE~F~v~L~~~~~~~--~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~~ 220 (334)
....|.+.+....++. +......+|.|+|- |.+|.|.-....++|.|+.
T Consensus 70 ~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~ 121 (215)
T 2qvi_A 70 LIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGS 121 (215)
T ss_dssp TCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSC
T ss_pred cCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCC
Confidence 5566777766543332 22234567888885 5677766544455665653
No 37
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=36.30 E-value=2.2e+02 Score=25.01 Aligned_cols=87 Identities=11% Similarity=0.172 Sum_probs=55.2
Q ss_pred eEEEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCcc-----CCCCccccceEEEEcCCCeEEEEEEEEeeC
Q psy11985 93 ARIFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQ-----AGSDYVGAAGKIVFQPGELEQRIRLQVIDD 167 (334)
Q Consensus 93 ~~v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~-----~g~Dy~~~~g~l~F~~get~k~i~v~IidD 167 (334)
+-|.+....+...++...+.|.|.=.+.. +.-|.-...+|... ...+|..+.-....+||+. +.++|.-..+
T Consensus 28 A~v~i~~TRvIy~~~~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~-q~lRI~~~~~ 104 (257)
T 3q48_A 28 AGLIAQGTRVVFPASEREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGG-AVLRIAYLKA 104 (257)
T ss_dssp ---CCSCSEEEEETTCSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEE-EEEEEEECCC
T ss_pred eeEEEcceEEEEeCCCcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCc-eEEEEEECCC
Confidence 34566666777777777888888654543 44444344454321 1346888888888999866 6777766666
Q ss_pred CCcccCe-EEEEEEec
Q psy11985 168 DVFEEDE-YFFVHLTK 182 (334)
Q Consensus 168 ~~~E~dE-~F~v~L~~ 182 (334)
.++...| .|++.+..
T Consensus 105 ~LP~DrESlf~lnv~e 120 (257)
T 3q48_A 105 PLPTDRESLFWLNILE 120 (257)
T ss_dssp CCCSSSCEEEEEEEEE
T ss_pred CCCCCceeEEEEEeee
Confidence 6776654 68888875
No 38
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=35.96 E-value=1.8e+02 Score=28.32 Aligned_cols=69 Identities=17% Similarity=0.215 Sum_probs=37.4
Q ss_pred EEEecccceEEEeee--ee---cceEEEec--cCCeeecCCceEEEEEeCC-CCCceEEEeec--eEEEEeee--eEEEE
Q psy11985 214 VTIAESVGIVKELWS--TR---HGVVHLTK--VKDAKLVAPSSATVMILDD-DHAGSFGFLET--SVTIAESV--GMYEL 281 (334)
Q Consensus 214 ~~v~E~~G~v~v~~~--~~---~~~v~l~~--~~~~~lg~~~~atVtI~dd-d~~g~~~F~~~--~~~V~E~~--g~v~v 281 (334)
|.++...|.+.+... ++ ...+++.- ..+..+-.....+|+|.|- |++|. |.+. ...|.|+. |+...
T Consensus 57 F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~--F~~~~y~~~V~En~~~gt~v~ 134 (546)
T 1l3w_A 57 FRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPK--FTQDVFRGSVREGVQPGTQVM 134 (546)
T ss_dssp EEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCE--ESSSCEEEEEETTCCSSEEEE
T ss_pred EEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCE--ecCceeEEEEECCCCCCCEEE
Confidence 666666776655421 11 22333332 2222333445677888876 56786 4554 45688875 55555
Q ss_pred EEE
Q psy11985 282 EVL 284 (334)
Q Consensus 282 ~V~ 284 (334)
.|.
T Consensus 135 ~v~ 137 (546)
T 1l3w_A 135 AVS 137 (546)
T ss_dssp ECC
T ss_pred EEE
Confidence 554
No 39
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=34.83 E-value=87 Score=26.42 Aligned_cols=92 Identities=20% Similarity=0.195 Sum_probs=0.0
Q ss_pred cceEEEEecCCCCCccceec----------eEEEEecccceEEEe-------eeeecceEEEeccCCeeecCCceEEEEE
Q psy11985 192 SSATVMILDDDHAGSFGFLE----------TSVTIAESVGIVKEL-------WSTRHGVVHLTKVKDAKLVAPSSATVMI 254 (334)
Q Consensus 192 ~~~~vtI~ddd~~~~~~f~~----------~~~~v~E~~G~v~v~-------~~~~~~~v~l~~~~~~~lg~~~~atVtI 254 (334)
....+++.+.|....+.|.- ..|.++...|.+.+. ...-...|......+..+-.....+|+|
T Consensus 19 ~~~v~~v~a~D~d~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V 98 (218)
T 3k5r_A 19 PRDVGKVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIV 98 (218)
T ss_dssp CEEEEECBCTTCCTTCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEE
Q ss_pred eCC-CCCceEEEeeceEEEEeee--eEEEEEE
Q psy11985 255 LDD-DHAGSFGFLETSVTIAESV--GMYELEV 283 (334)
Q Consensus 255 ~dd-d~~g~~~F~~~~~~V~E~~--g~v~v~V 283 (334)
.|- |++|.|.-..-...|.|+. |+....|
T Consensus 99 ~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v 130 (218)
T 3k5r_A 99 IDQNDNRPIFREGPYIGHVMEGSPTGTTVMRM 130 (218)
T ss_dssp ECTTCCCCCCCSCSEEEEEETTCCTTCEEEEC
T ss_pred EeCCCCCCcccCCceEEEEECCCCCCCEEEEE
No 40
>1klf_A FIMC chaperone, chaperone protein FIMC; adhesin-chaperone complex, mannose-bound, chaperone/adhesin complex complex; HET: MAN; 2.79A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1 PDB: 1kiu_A* 3rfz_C 1qun_A 1bf8_A 1ze3_C 3bwu_C 3jwn_C
Probab=33.68 E-value=2.2e+02 Score=24.09 Aligned_cols=86 Identities=7% Similarity=0.167 Sum_probs=57.0
Q ss_pred EEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEEE-eeCCCcccC
Q psy11985 95 IFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQV-IDDDVFEED 173 (334)
Q Consensus 95 v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~I-idD~~~E~d 173 (334)
|......+...|+...+.|.|.=.+.. .+.-|.-...+|......+|..+.-....+||+. +.++|.- ..+.++...
T Consensus 2 v~l~~TRvIy~~~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~pfivtPPl~rl~p~~~-q~lRI~~~~~~~lP~Dr 79 (205)
T 1klf_A 2 VALGATRVIYPAGQKQVQLAVTNNDEN-STYLIQSWVENADGVKDGRFIVTPPLFAMKGKKE-NTLRILDATNNQLPQDR 79 (205)
T ss_dssp EEESCSEEEEETTCSEEEEEEEECCSS-CCEEEEEEEEETTSCCCSSEEEESSEEEECSSEE-EEEEEEECSCSCSCSSS
T ss_pred eEecceEEEEeCCCcEEEEEEEcCCCC-CcEEEEEEEecCCCCccCCEEEcCCeEEECCCCc-eEEEEEecCCCCCCCCc
Confidence 344556667777778888888655532 1333333334444444567888888889998866 6667665 566788776
Q ss_pred e-EEEEEEec
Q psy11985 174 E-YFFVHLTK 182 (334)
Q Consensus 174 E-~F~v~L~~ 182 (334)
| -|++.+..
T Consensus 80 Eslf~lnv~e 89 (205)
T 1klf_A 80 ESLFWMNVKA 89 (205)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEEeEe
Confidence 6 78888876
No 41
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=31.60 E-value=80 Score=26.83 Aligned_cols=38 Identities=24% Similarity=0.233 Sum_probs=22.2
Q ss_pred CceEEEEEeCC-CCCceEEEeeceEEEEeee--eEEEEEEE
Q psy11985 247 PSSATVMILDD-DHAGSFGFLETSVTIAESV--GMYELEVL 284 (334)
Q Consensus 247 ~~~atVtI~dd-d~~g~~~F~~~~~~V~E~~--g~v~v~V~ 284 (334)
....+|+|.|- |++|.|.-..-...|.|+. |+..+.|.
T Consensus 90 ~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~ 130 (215)
T 2a4e_A 90 PSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVT 130 (215)
T ss_dssp EEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECC
T ss_pred cEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEE
Confidence 34567778876 6678643222244677874 55555554
No 42
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=28.49 E-value=2.3e+02 Score=22.73 Aligned_cols=29 Identities=10% Similarity=0.185 Sum_probs=15.3
Q ss_pred eEEEEEeCCCCC--ceEEEeec---eEEEEeeee
Q psy11985 249 SATVMILDDDHA--GSFGFLET---SVTIAESVG 277 (334)
Q Consensus 249 ~atVtI~ddd~~--g~~~F~~~---~~~V~E~~g 277 (334)
..++++..+... +-+.|..+ .|+|.|-.|
T Consensus 39 ~~tvt~~a~G~v~F~~i~f~~~G~Y~YtI~E~~G 72 (141)
T 3klq_A 39 IEEITIAGSGKASFSPLTFTTVGQYTYRVYQKPS 72 (141)
T ss_dssp EEEEEEESSEEEECCCEEECSCEEEEEEEEECCC
T ss_pred cEEEEEcCCCcEEeCceEeCCCEEEEEEEEEeCC
Confidence 456776543221 23344444 678888554
No 43
>4dqa_A Uncharacterized protein; two domains structure, DUF 1735, laminin_G_3 concanavalin A- lectin/glucanases superfamily domain; HET: MSE; 1.50A {Bacteroides ovatus}
Probab=27.59 E-value=1.3e+02 Score=27.68 Aligned_cols=75 Identities=16% Similarity=0.331 Sum_probs=50.3
Q ss_pred CCeEEEEEEEEecCCCceEEEEEEeecCCcc------CCCCccc--------cceEEEEcCCCe-EEEEEEEEeeCCCcc
Q psy11985 107 NVGEFEVVVAREGDVSGTVTVEYATEDGTAQ------AGSDYVG--------AAGKIVFQPGEL-EQRIRLQVIDDDVFE 171 (334)
Q Consensus 107 ~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~------~g~Dy~~--------~~g~l~F~~get-~k~i~v~IidD~~~E 171 (334)
+.+...|+|..+......+.|.+...|-+.. .|.+|.. .+.++++++|+. +..+.|.+-+.+..+
T Consensus 25 ~~~~~~~~v~ls~~~~~dv~v~~~vd~~~ll~~YN~~~~t~y~~LP~~~y~l~~~~v~I~aG~~~s~~v~i~~~~~~~l~ 104 (355)
T 4dqa_A 25 DVMTFDLVSRLSSATSSQVDVSYSVAEPSVVDEYNAKYGTNYEMLDVSQVKLSSTTSSISSGKLYADNIEVELSGLEALK 104 (355)
T ss_dssp CCEEEEECCEESSCCSSCEEEEEEECCHHHHHHHHHHHTCCCEECCGGGEEESCSEEEECTTCSBCCCEEEEECCCTTSC
T ss_pred CceEEEEEEEecCCCCCCEEEEEEECCHHHHHHHHHHcCCeeEECCHHHEEEcCCEEEEcCCCEeeeeEEEEEeecccCC
Confidence 3467788888788888899999986512211 1334543 346899999995 447888887665556
Q ss_pred cCeEEEEEEe
Q psy11985 172 EDEYFFVHLT 181 (334)
Q Consensus 172 ~dE~F~v~L~ 181 (334)
.++.+.|=|.
T Consensus 105 ~~~~YvLPl~ 114 (355)
T 4dqa_A 105 AGNSYVLPMR 114 (355)
T ss_dssp SSEEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 6677765554
No 44
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=27.08 E-value=4.4e+02 Score=25.55 Aligned_cols=49 Identities=14% Similarity=0.287 Sum_probs=28.7
Q ss_pred cccCeEEEEEEecccCcc--------ccCCcceEEEEecCCCCCccceeceEE--EEeccc
Q psy11985 170 FEEDEYFFVHLTKVKDAK--------LVAPSSATVMILDDDHAGSFGFLETSV--TIAESV 220 (334)
Q Consensus 170 ~E~dE~F~v~L~~~~~~~--------~~~~~~~~vtI~ddd~~~~~~f~~~~~--~v~E~~ 220 (334)
+|....|.+.+..-.++. .....+++|+|.|-+++|. |....| .|.|+.
T Consensus 293 ~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND~P~--f~~~~~~~~v~En~ 351 (559)
T 3q2w_A 293 FETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNENPY--FAPNPKIIRQEEGL 351 (559)
T ss_dssp TTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCCCCE--ESSSEEEEEEESCC
T ss_pred CccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCCCCc--ccccceEEEEeCCC
Confidence 566677777776543321 1223467788888766764 444444 566654
No 45
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=26.30 E-value=2.8e+02 Score=22.95 Aligned_cols=102 Identities=16% Similarity=0.109 Sum_probs=52.5
Q ss_pred ceEEEEcCC--e--EEEEEEEEecCCCceEEEEEEeecCCccCCCCcc--ccceEEEEcCCCeEEEEEEEEeeCCCcccC
Q psy11985 100 QYYTVLENV--G--EFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYV--GAAGKIVFQPGELEQRIRLQVIDDDVFEED 173 (334)
Q Consensus 100 ~~~~v~E~~--g--~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~--~~~g~l~F~~get~k~i~v~IidD~~~E~d 173 (334)
..+.|.||. | ..-..|....+.. .. .|+..++.+. .-|. +..|.|... .---+|..
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~~D~D~g-~~--~Y~i~~~~~~--~~F~Id~~tG~i~~~-------------~~LDrE~~ 66 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLTSSVGNK-NA--MYIIEGESAN--TIFKVQGYDGDIYAF-------------ERLDREKK 66 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECCBCCCCT-TE--EEEEEETTBT--TTEEEETTTTEEEES-------------SCCCTTTC
T ss_pred ccEEEEccCCCCCCEEEEEEEecCCCC-Cc--EEEEecCCCC--CeEEEECCcCEEEEC-------------cccccccc
Confidence 457888984 2 3323333223222 22 7877655442 1222 223444322 12225666
Q ss_pred eEEEEEEecccCcc---ccCCcceEEEEecC-CCCCccceeceEEEEecc
Q psy11985 174 EYFFVHLTKVKDAK---LVAPSSATVMILDD-DHAGSFGFLETSVTIAES 219 (334)
Q Consensus 174 E~F~v~L~~~~~~~---~~~~~~~~vtI~dd-d~~~~~~f~~~~~~v~E~ 219 (334)
..|.+.+....++. .......+|+|.|- |.+|.|.-....++|.|+
T Consensus 67 ~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~ 116 (203)
T 3ppe_A 67 AEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEM 116 (203)
T ss_dssp CEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETT
T ss_pred ceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEecc
Confidence 66666665543332 33455678889995 667776544445566554
No 46
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=23.81 E-value=3.5e+02 Score=25.10 Aligned_cols=37 Identities=8% Similarity=0.043 Sum_probs=22.0
Q ss_pred ceEEEEEeCC-CCCceEEEee--ceEEEEeee--eEEEEEEE
Q psy11985 248 SSATVMILDD-DHAGSFGFLE--TSVTIAESV--GMYELEVL 284 (334)
Q Consensus 248 ~~atVtI~dd-d~~g~~~F~~--~~~~V~E~~--g~v~v~V~ 284 (334)
...+|+|.|- |++|.|.-.. -...|.|+. |+....|.
T Consensus 95 ~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~ 136 (419)
T 3ubh_A 95 QRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQ 136 (419)
T ss_dssp EEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECC
T ss_pred EEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEE
Confidence 4567777775 6688764433 135688874 55444443
No 47
>1l4i_A SFAE protein; periplasmic chaperone, immunoglobulin fold; 2.20A {Escherichia coli} SCOP: b.1.11.1 b.7.2.1
Probab=23.71 E-value=3.3e+02 Score=22.92 Aligned_cols=86 Identities=13% Similarity=0.218 Sum_probs=55.6
Q ss_pred EEEecceEEEEcCCeEEEEEEEEecCCCceEEEEEEeecCCccCCCCccccceEEEEcCCCeEEEEEEE-EeeCCCcccC
Q psy11985 95 IFFKPQYYTVLENVGEFEVVVAREGDVSGTVTVEYATEDGTAQAGSDYVGAAGKIVFQPGELEQRIRLQ-VIDDDVFEED 173 (334)
Q Consensus 95 v~F~~~~~~v~E~~g~v~v~V~R~g~~~~~v~V~~~t~~GTA~~g~Dy~~~~g~l~F~~get~k~i~v~-IidD~~~E~d 173 (334)
|.+....+...|+...+.|.|.=.+. ..+.-|.-...++......+|..+.-....+||+. +.++|. -..+.++...
T Consensus 2 v~l~~TRvIy~~~~k~~sl~l~N~~~-~~p~LvQsWv~~~~~~~~~pfivtPPl~rl~p~~~-q~lRI~~~~~~~lP~Dr 79 (206)
T 1l4i_A 2 VALGATRVIYPEGQKQVQLAVTNNDD-KSSYLIQSWIENAEGKKDARFVITPPLFSMQGKKE-NTLRIIDATNGQMPEDR 79 (206)
T ss_dssp EEESCSEEEEETTCSEEEEEEEECCT-TCEEEEEEEEEETTSCBCSSEEEESSEEEEESSEE-EEEEEEECCTTCSCSSS
T ss_pred eEeCceEEEEeCCCcEEEEEEEeCCC-CccEEEEEEEecCCCCccCCEEEcCCeEEECCCCc-eEEEEEecCCCCCCCCc
Confidence 34556666777877888888865443 23444444444543334457887888888998866 556665 4445778776
Q ss_pred e-EEEEEEec
Q psy11985 174 E-YFFVHLTK 182 (334)
Q Consensus 174 E-~F~v~L~~ 182 (334)
| -|++.+..
T Consensus 80 Eslf~lnv~e 89 (206)
T 1l4i_A 80 ESLFWVNVKA 89 (206)
T ss_dssp CEEEEEEEEE
T ss_pred eEEEEEEeec
Confidence 6 78888875
No 48
>1p3q_Q VPS9P, vacuolar protein sorting-associated protein VPS9; trafficking, post translational modification, mono- ubiquitination; 1.70A {Saccharomyces cerevisiae} SCOP: a.5.2.4 PDB: 1mn3_A
Probab=22.91 E-value=1.1e+02 Score=20.41 Aligned_cols=29 Identities=24% Similarity=0.362 Sum_probs=22.4
Q ss_pred HhhHHHHHHHHHhhhcCCCCCHHHHHHHH
Q psy11985 13 NETMNYATTLRELRQMHPNLKMEELEKMA 41 (334)
Q Consensus 13 ~~r~~~~~~~~~~~~~~p~~~~~~~~~~a 41 (334)
-+|++.-..++.|+.++|++|.+-+....
T Consensus 7 i~~~e~~~~~~~L~~MFP~lD~evI~~Vl 35 (54)
T 1p3q_Q 7 IEENERKDTLNTLQNMFPDMDPSLIEDVC 35 (54)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcccCCHHHHHHHH
Confidence 45667777788888889999988776553
No 49
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=21.77 E-value=2.3e+02 Score=29.56 Aligned_cols=72 Identities=17% Similarity=0.146 Sum_probs=40.0
Q ss_pred EEEEecccceEEEeee--ee---cceEEEec--cCCeeecCCceEEEEEeCC-CCCceEEEeeceEEEEeee--eEEEEE
Q psy11985 213 SVTIAESVGIVKELWS--TR---HGVVHLTK--VKDAKLVAPSSATVMILDD-DHAGSFGFLETSVTIAESV--GMYELE 282 (334)
Q Consensus 213 ~~~v~E~~G~v~v~~~--~~---~~~v~l~~--~~~~~lg~~~~atVtI~dd-d~~g~~~F~~~~~~V~E~~--g~v~v~ 282 (334)
.|.++...|.+.+... ++ ...+++.- ..+..+-.+...+|+|.|- |++|.|.-..-..+|.|+. |+..+.
T Consensus 205 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~ 284 (880)
T 1q55_A 205 VFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMA 284 (880)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEE
T ss_pred EEEEECCcCEEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEE
Confidence 4788877887766422 21 23344432 2223333445677888876 6678653222245678874 665555
Q ss_pred EE
Q psy11985 283 VL 284 (334)
Q Consensus 283 V~ 284 (334)
|.
T Consensus 285 v~ 286 (880)
T 1q55_A 285 VS 286 (880)
T ss_dssp CC
T ss_pred EE
Confidence 54
Done!