Query psy11989
Match_columns 342
No_of_seqs 324 out of 1403
Neff 4.7
Searched_HMMs 46136
Date Fri Aug 16 15:44:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11989.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11989hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00845 caca sodium/calcium 100.0 3.4E-52 7.3E-57 444.5 16.7 228 27-312 49-278 (928)
2 KOG1307|consensus 100.0 1.5E-43 3.1E-48 353.5 7.5 186 41-314 43-231 (588)
3 KOG1306|consensus 100.0 3.3E-37 7.2E-42 309.6 8.1 206 26-292 4-209 (596)
4 TIGR00927 2A1904 K+-dependent 100.0 8.1E-33 1.8E-37 294.3 14.6 175 34-296 438-615 (1096)
5 PLN03151 cation/calcium exchan 99.9 1.2E-26 2.5E-31 243.4 14.2 155 51-289 137-293 (650)
6 PRK10734 putative calcium/sodi 99.9 8E-26 1.7E-30 220.1 14.5 194 58-285 5-319 (325)
7 TIGR00367 K+-dependent Na+/Ca+ 99.9 7.7E-25 1.7E-29 210.9 12.3 189 56-278 1-307 (307)
8 COG0530 ECM27 Ca2+/Na+ antipor 99.9 1.2E-23 2.5E-28 204.9 14.1 196 54-283 8-318 (320)
9 PRK10734 putative calcium/sodi 99.9 7E-24 1.5E-28 206.5 5.0 129 142-284 17-145 (325)
10 COG0530 ECM27 Ca2+/Na+ antipor 99.9 4.6E-23 1E-27 200.8 4.5 134 140-288 22-156 (320)
11 TIGR00367 K+-dependent Na+/Ca+ 99.9 1.9E-22 4.2E-27 194.3 5.4 130 142-286 16-146 (307)
12 TIGR00846 caca2 calcium/proton 99.8 6.6E-20 1.4E-24 181.2 8.6 128 142-281 235-363 (365)
13 KOG1307|consensus 99.8 9.3E-20 2E-24 183.4 7.0 120 163-288 456-580 (588)
14 KOG2399|consensus 99.8 4.3E-19 9.4E-24 184.9 6.4 149 50-284 100-251 (605)
15 PF01699 Na_Ca_ex: Sodium/calc 99.7 6.2E-19 1.3E-23 147.9 1.5 128 143-281 6-139 (140)
16 TIGR00846 caca2 calcium/proton 99.7 1.9E-17 4.2E-22 163.7 4.5 135 142-288 49-194 (365)
17 TIGR00378 cax calcium/proton e 99.6 1.2E-16 2.6E-21 157.0 6.4 132 142-286 31-175 (349)
18 TIGR00378 cax calcium/proton e 99.6 4.5E-16 9.8E-21 153.0 10.2 127 142-280 219-346 (349)
19 TIGR00845 caca sodium/calcium 99.6 1.3E-15 2.7E-20 164.7 6.3 130 145-283 771-918 (928)
20 TIGR00927 2A1904 K+-dependent 99.6 1.3E-15 2.8E-20 163.8 3.7 134 144-288 949-1088(1096)
21 PLN03151 cation/calcium exchan 98.6 4.5E-08 9.7E-13 104.0 6.5 130 149-287 505-641 (650)
22 PRK10599 calcium/sodium:proton 98.3 8.6E-06 1.9E-10 81.7 13.1 109 164-283 255-365 (366)
23 KOG1306|consensus 98.1 1.7E-06 3.6E-11 89.1 2.8 118 157-283 455-589 (596)
24 KOG2399|consensus 98.0 2.3E-05 4.9E-10 83.0 9.6 122 152-282 471-597 (605)
25 KOG1397|consensus 98.0 4E-05 8.8E-10 77.3 10.0 223 6-282 201-433 (441)
26 COG0387 ChaA Ca2+/H+ antiporte 97.8 0.00021 4.5E-09 71.8 11.0 125 145-284 238-366 (368)
27 PF01699 Na_Ca_ex: Sodium/calc 96.7 0.0023 5E-08 53.5 4.7 51 67-135 2-52 (140)
28 KOG1397|consensus 95.7 0.072 1.6E-06 54.4 9.9 117 167-290 127-261 (441)
29 COG0387 ChaA Ca2+/H+ antiporte 92.2 0.19 4.1E-06 51.0 4.7 70 145-223 51-120 (368)
30 PF08370 PDR_assoc: Plant PDR 46.1 18 0.0004 28.2 2.4 24 199-222 31-55 (65)
31 COG1953 FUI1 Cytosine/uracil/t 37.3 2.6E+02 0.0055 30.0 9.9 165 91-283 26-216 (497)
No 1
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=100.00 E-value=3.4e-52 Score=444.52 Aligned_cols=228 Identities=61% Similarity=1.100 Sum_probs=214.5
Q ss_pred CCCCCCCccccccCCCcccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHhccceeeEEecCCCccceeeeeee
Q psy11989 27 QSQCQDGIILSFWDAEGEMTTLDRVMRGVVYMVLLIYFFLGVSIISDRFMSAIEVITSQEREVSVTNKAGTRHKVTVRVW 106 (342)
Q Consensus 27 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~lly~F~~l~iv~d~F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~ 106 (342)
...|++|+|+|.|.|++. |.++|..|.++|+++++|||++++++||+||||||+|++++|+|++++|+|++...++|+|
T Consensus 49 ~~~c~~g~~~p~w~p~~~-s~~~~~~r~~~~~~~l~y~F~~~~i~ad~f~~sie~i~~~~~~v~~~~~~ge~~~~~~ri~ 127 (928)
T TIGR00845 49 SYYCKEGVILPIWEPQNP-SVGDKIARATVYFVAMVYMFLGVSIIADRFMASIEVITSQEKEITIKKPNGETTVTTVRIW 127 (928)
T ss_pred CccccCCeEeeeecCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccceeeeecCCCcceeeEeeeC
Confidence 347999999999999988 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHhhcCchhHHHHHHHHHhcCccccCCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHH
Q psy11989 107 NETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSV 186 (342)
Q Consensus 107 ~~~VagLtlma~g~s~PEl~~s~I~~~~~~~~~~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSI 186 (342)
|++|||+|+| |+|||+||+++|+
T Consensus 128 ~~tvag~t~~---------------------------------------------------------A~gssaPe~~~s~ 150 (928)
T TIGR00845 128 NETVSNLTLM---------------------------------------------------------ALGSSAPEILLSV 150 (928)
T ss_pred Ccccccceee---------------------------------------------------------eccCCchHHHHHH
Confidence 8888888877 6888888888888
Q ss_pred HHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHHHHHHHHhcCCeehhH
Q psy11989 187 IEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWLYAILAVFSPGIVEVW 266 (342)
Q Consensus 187 iAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v~~~g~It~~ 266 (342)
+++++++..++|+|+|+|+||++||+++|.|+|++..|.|+.+++++..+|..++.|++|+|+|+++++.++++|.|+.|
T Consensus 151 ~~~~~~~~~~g~lg~gtivGsa~Fn~~vi~~~~~~~~p~g~~~~i~~l~Vf~vTa~wSifAYiWl~lil~v~sp~vv~vw 230 (928)
T TIGR00845 151 IEVCGHNFEAGDLGPSTIVGSAAFNMFIIIAICVYVIPDGETRKIKHLRVFFVTAAWSVFAYVWLYLILAVFSPGVVEVW 230 (928)
T ss_pred HHHhccCCccccccccceehhHHHHHHhhheeEEEeccCccceeeeeeeEEEEeeeHHHHHHHHHHhhheeeCCcHHHHH
Confidence 88775555688999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccchhhh--HHHhhhcccceeEeeccCC
Q psy11989 267 EGLLTFLFFPATVLTAYFADKKLASHE--FKKFRLNKNRVIVAAESGD 312 (342)
Q Consensus 267 EgllLLllY~~YV~~~~~~d~~l~~~~--~~~~~~~~~~~~~~~~~~~ 312 (342)
||++++++|+++++++|..||++..|| .||||.+|+|+++++.++|
T Consensus 231 E~~lTl~ffp~~V~~A~~aD~~l~~~k~~~k~yr~~k~~~~i~~~e~~ 278 (928)
T TIGR00845 231 EGLLTFFFFPLCVVFAWVADRRLLFYKYVYKRYRAGKQRGMIIETEGD 278 (928)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhccccccccccCceEeecCCC
Confidence 999999999999999999999999987 8999999999999988886
No 2
>KOG1307|consensus
Probab=100.00 E-value=1.5e-43 Score=353.50 Aligned_cols=186 Identities=30% Similarity=0.508 Sum_probs=158.6
Q ss_pred CCcccccccc-hhhhHHHHHHHHHHHHHHHHHHhh-hhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhh
Q psy11989 41 AEGEMTTLDR-VMRGVVYMVLLIYFFLGVSIISDR-FMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMAL 118 (342)
Q Consensus 41 ~~~~~~~~~~-~~~~~ly~~~lly~F~~l~iv~d~-F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~ 118 (342)
|.|.||.++| +|.+++|+++++|||+++|||||+ |+|||++||++ |.+
T Consensus 43 P~DiFs~e~rr~G~VvlHv~g~iYmFvALAIVCDefFVPSL~vItEk---------------------------L~i--- 92 (588)
T KOG1307|consen 43 PPDIFSLEQRRQGAVVLHVIGLIYMFVALAIVCDEFFVPSLDVITEK---------------------------LGI--- 92 (588)
T ss_pred CCccccHHHhhcCcEEeehhhHHHHHHHHHHHhcccccccHHHHHHH---------------------------hcC---
Confidence 8999999875 899999999999999999999999 89999999998 332
Q ss_pred cCchhHHHHHHHHHhcCccccCCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCC
Q psy11989 119 GSSAPEILLSVIEIWGKGFSAGELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGE 198 (342)
Q Consensus 119 g~s~PEl~~s~I~~~~~~~~~~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~d 198 (342)
|+||||+||||.|+||||+|||++++ |..++|
T Consensus 93 ---------------------------------------------SdDVAGATFMAAGgSAPElFTSvIGV---FIt~~d 124 (588)
T KOG1307|consen 93 ---------------------------------------------SDDVAGATFMAAGGSAPELFTSVIGV---FITQGD 124 (588)
T ss_pred ---------------------------------------------cccccchhhhhccCCchHHhhhheeE---EEecCC
Confidence 99999999999999999999999955 589999
Q ss_pred ccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHH-HHHHHHHhcCCeehhHHHHHHHHHHHH
Q psy11989 199 LGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIW-LYAILAVFSPGIVEVWEGLLTFLFFPA 277 (342)
Q Consensus 199 IgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~-llll~~v~~~g~It~~EgllLLllY~~ 277 (342)
+|+|||+||++|||++|+|+|++++ +++.+++|||++|| +.+|++ ++.++++++|..|.|||+++|+.+|+.
T Consensus 125 VGiGTIVGSAvFNIL~Vig~C~LFS--rqvl~LtWWPLfRD-----~sfY~lsl~~Li~Ff~D~~I~WwEaL~L~~~Yi~ 197 (588)
T KOG1307|consen 125 VGIGTIVGSAVFNILCVIGVCGLFS--RQVLNLTWWPLFRD-----VSFYTLSLIMLIYFFLDELIMWWEALALLLMYIS 197 (588)
T ss_pred cceeeeeehhhhhHHHHHHHHHhhc--ccccccccchhhhh-----hHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999995 47899999999999 567877 456778889999999999999999999
Q ss_pred HHHHHHhccccchhhhHHHhhhcccceeEeeccCCCC
Q psy11989 278 TVLTAYFADKKLASHEFKKFRLNKNRVIVAAESGDIE 314 (342)
Q Consensus 278 YV~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (342)
|+++|.+ ++++..+-+|... |+++.+.+...+++
T Consensus 198 Yv~~MKf-N~~ie~~vk~~~~--rn~v~v~a~~~~~~ 231 (588)
T KOG1307|consen 198 YVVFMKF-NGQIEQLVKKMLK--RNKVNVLANGAEIK 231 (588)
T ss_pred Hheeeeh-hhHHHHHHHHHhc--cCcceecccccccC
Confidence 9999976 4555554444433 33444444443343
No 3
>KOG1306|consensus
Probab=100.00 E-value=3.3e-37 Score=309.58 Aligned_cols=206 Identities=64% Similarity=1.031 Sum_probs=190.3
Q ss_pred CCCCCCCCccccccCCCcccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhhHHHHhccceeeEEecCCCccceeeeee
Q psy11989 26 TQSQCQDGIILSFWDAEGEMTTLDRVMRGVVYMVLLIYFFLGVSIISDRFMSAIEVITSQEREVSVTNKAGTRHKVTVRV 105 (342)
Q Consensus 26 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ly~~~lly~F~~l~iv~d~F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~ 105 (342)
....|++|+++|-|.|++. +..++ .++|++.+.|+|+++++++|+||.++|+|++++|||++++|+|++++..+|+
T Consensus 4 ~s~~C~~g~l~P~~~tei~-s~gd~---~~vYfv~l~Y~F~GvsiiadrFm~sIE~its~~kev~v~k~~g~e~~~~vri 79 (596)
T KOG1306|consen 4 GSEPCMAGLLFPEWATEIV-SLGDE---AIVYFVALPYAFLGVSIIADRFMASIEVITSASREVIVIKPTGEESTTYVRV 79 (596)
T ss_pred ccccccCcccccccccccC-CCCcc---ceEEeehhHHHHhhHHHHhhhheeeeeccccccceeEEEccCCceeEEEEEE
Confidence 3567999999999999544 66665 8999999999999999999999999999999999999999999999999999
Q ss_pred ehhhhhhHHHHhhcCchhHHHHHHHHHhcCccccCCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHH
Q psy11989 106 WNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLS 185 (342)
Q Consensus 106 ~~~~VagLtlma~g~s~PEl~~s~I~~~~~~~~~~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tS 185 (342)
||+||+++|+| |+|+|+||+.+|
T Consensus 80 WNeTVsnltLm---------------------------------------------------------AlGsSaPEIlLS 102 (596)
T KOG1306|consen 80 WNETVSNLTLM---------------------------------------------------------ALGSSAPEILLS 102 (596)
T ss_pred echhhHHHHHh---------------------------------------------------------hcccCcchhhHH
Confidence 99999999999 566677777777
Q ss_pred HHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHHHHHHHHhcCCeehh
Q psy11989 186 VIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWLYAILAVFSPGIVEV 265 (342)
Q Consensus 186 IiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v~~~g~It~ 265 (342)
++.+.++++..+|+|+|+|+||+.||++.++++|....|.|+.+++.+..++..++.|+.++|+|+++++.++++|.++.
T Consensus 103 iIe~~gn~f~agdLGPgTIVGSAAfnlF~iiAVCv~vip~Ge~rki~~lrVf~VtA~ws~fAYiWLyliLsV~sPnvv~v 182 (596)
T KOG1306|consen 103 IIEFCGNEFQAGDLGPGTIVGSAAFNLFEIIAVCVRVIPAGELRKIFHLRVFFVTADWSIFAYIWLYLILSVFSPNVVYV 182 (596)
T ss_pred HHHHhcccccccCcCCceEechhhhhhhhheEEEEEEcCCcccccccCceEEEEEeeHHHHHHHHHhheeEeccCCeeEE
Confidence 77777667778999999999999999999999999999999999999999998889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccchhh
Q psy11989 266 WEGLLTFLFFPATVLTAYFADKKLASH 292 (342)
Q Consensus 266 ~EgllLLllY~~YV~~~~~~d~~l~~~ 292 (342)
||+++.+.+|++.+...|..|+++..|
T Consensus 183 wEallT~~ffp~~vv~ayaad~r~~f~ 209 (596)
T KOG1306|consen 183 WEALLTLLFFPLVVVSAYAADKRALFY 209 (596)
T ss_pred eehhhhHhhhhhhhhHHHHHhhhhhee
Confidence 999999999999999999999999877
No 4
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=100.00 E-value=8.1e-33 Score=294.29 Aligned_cols=175 Identities=29% Similarity=0.483 Sum_probs=148.2
Q ss_pred ccccccCCCcccccccc-hhhhHHHHHHHHHHHHHHHHHHhh-hhhhHHHHhccceeeEEecCCCccceeeeeeehhhhh
Q psy11989 34 IILSFWDAEGEMTTLDR-VMRGVVYMVLLIYFFLGVSIISDR-FMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVA 111 (342)
Q Consensus 34 ~~~~~~~~~~~~~~~~~-~~~~~ly~~~lly~F~~l~iv~d~-F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~Va 111 (342)
-+..| |+|.|+..+| .+.+++|+++++|+|++++++||+ |+|+++.|++++
T Consensus 438 p~~ef--P~d~fti~~R~~g~VVL~l~~liy~Fv~LaIv~dDyFVPSLe~IAekL------------------------- 490 (1096)
T TIGR00927 438 PKAEY--PPDLFSVEERRQGWVVLHIFGMMYVFVALAIVCDEYFVPALGVITDKL------------------------- 490 (1096)
T ss_pred chhhC--CcccccccccccceeHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHh-------------------------
Confidence 44444 7888997765 899999999999999999999988 999999999973
Q ss_pred hHHHHhhcCchhHHHHHHHHHhcCccccCCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHh
Q psy11989 112 NLTLMALGSSAPEILLSVIEIWGKGFSAGELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWG 191 (342)
Q Consensus 112 gLtlma~g~s~PEl~~s~I~~~~~~~~~~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~ 191 (342)
|+ ||+|+|+||||+|||+||+++|++|++
T Consensus 491 -----------------------------------------------gL---SE~VAGaTLLAfGTSAPELfTSLiAv~- 519 (1096)
T TIGR00927 491 -----------------------------------------------QI---SEDVAGATFMAAGGSAPELFTSLIGVF- 519 (1096)
T ss_pred -----------------------------------------------CC---cHhhhheeeeeeecCcHHHHHHHHHHH-
Confidence 33 999999999999999999999999997
Q ss_pred cCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHH-HHHHHHhcCCeehhHHHHH
Q psy11989 192 KGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWL-YAILAVFSPGIVEVWEGLL 270 (342)
Q Consensus 192 ~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~l-lll~~v~~~g~It~~Egll 270 (342)
.+++|+|+||++|||+||+++|+|+|+++.+ ...+++++++.|| +.||++. .+++.++++++|+||||++
T Consensus 520 --~g~sDIGVGNIVGSnIFNILLVLGl~aLis~--~~l~Ld~~~L~RD-----llFyILAv~lLilf~lDG~Itr~EgII 590 (1096)
T TIGR00927 520 --ISHSNVGIGTIVGSAVFNILFVIGTCALFSR--EILNLTWWPLFRD-----VSFYILDLMMLILFFLDSLIAWWESLL 590 (1096)
T ss_pred --cCCCcceehhhHhHHHHHHHHHHhhheeecc--ccccccccceehh-----HHHHHHHHHHHHHHHhCCeEcHHHHHH
Confidence 7889999999999999999999999999865 3456778899999 4555553 3344556799999999999
Q ss_pred HHHHHHHHHHHHHhccccchhhhHHH
Q psy11989 271 TFLFFPATVLTAYFADKKLASHEFKK 296 (342)
Q Consensus 271 LLllY~~YV~~~~~~d~~l~~~~~~~ 296 (342)
|+++|++|++++++ ++++.++-.|+
T Consensus 591 LLlLYiiYVvvm~~-n~~i~~~~~~~ 615 (1096)
T TIGR00927 591 LLLAYALYVFTMKW-NKQIELWVKEQ 615 (1096)
T ss_pred HHHHHHHHHHHHHH-hHHHHHHHHHh
Confidence 99999999999976 56666554443
No 5
>PLN03151 cation/calcium exchanger; Provisional
Probab=99.94 E-value=1.2e-26 Score=243.40 Aligned_cols=155 Identities=19% Similarity=0.330 Sum_probs=129.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhh-hhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhhcCchhHHHHHH
Q psy11989 51 VMRGVVYMVLLIYFFLGVSIISDR-FMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSV 129 (342)
Q Consensus 51 ~~~~~ly~~~lly~F~~l~iv~d~-F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~g~s~PEl~~s~ 129 (342)
....++.+++++++|+.+++++|+ |+|+++.|++++ .
T Consensus 137 ~l~~~~l~~~l~~lF~~L~~ta~dyF~p~l~~Is~~L---------------------------~--------------- 174 (650)
T PLN03151 137 ILGYAVLGVWLVALFYLLGNTAADYFCCSLEKLSKLL---------------------------R--------------- 174 (650)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHh---------------------------C---------------
Confidence 344566678999999999999999 899999999973 2
Q ss_pred HHHhcCccccCCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhH
Q psy11989 130 IEIWGKGFSAGELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAA 209 (342)
Q Consensus 130 I~~~~~~~~~~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnI 209 (342)
+ ||+|||+|++|+|||+||+++|++|+. ..+++|+|+|+++||++
T Consensus 175 ------------------------------l---se~vAGvTlLAfGNsaPDlf~si~a~~--~~~~~~l~ig~ilGs~l 219 (650)
T PLN03151 175 ------------------------------L---PPTVAGVTLLPLGNGAPDVFASIAAFV--GKDAGEVGLNSVLGGAV 219 (650)
T ss_pred ------------------------------C---CHHHHHHHHHHHhCCcHHHHHHHHHHH--cCCCCceeeehhhhHHH
Confidence 2 999999999999999999999998865 12578999999999999
Q ss_pred HHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHH-HHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHhcccc
Q psy11989 210 YNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWL-YAILAVFSPGIVEVWEGLLTFLFFPATVLTAYFADKK 288 (342)
Q Consensus 210 FNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~l-lll~~v~~~g~It~~EgllLLllY~~YV~~~~~~d~~ 288 (342)
||+++|.|+++++.|. ++++++++++.|| +.+|++. .++..+.++|++++|||++++++|++|++++.. |+.
T Consensus 220 f~~~vV~G~v~l~~~~-~pf~v~~~~f~RD-----~~F~lla~~~l~~~l~~g~v~~~eai~ll~lY~~Yv~vv~~-~~~ 292 (650)
T PLN03151 220 FVTCVVVGIVSLCVAD-KEVQIDKRCFIRD-----LCFFLFTLVSLLVILMVGKVTVGGAIAFVSIYVVYAFLVAA-NEI 292 (650)
T ss_pred HHHHHHHHHHHHhccC-CceeecchhHHHh-----HHHHHHHHHHHHHHHHcCeEhHHHHHHHHHHHHHHHHHHHh-hHH
Confidence 9999999999887542 3678999999999 4445442 344456679999999999999999999998865 443
Q ss_pred c
Q psy11989 289 L 289 (342)
Q Consensus 289 l 289 (342)
+
T Consensus 293 l 293 (650)
T PLN03151 293 L 293 (650)
T ss_pred H
Confidence 3
No 6
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.93 E-value=8e-26 Score=220.08 Aligned_cols=194 Identities=21% Similarity=0.310 Sum_probs=147.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhhcCchhHHHHHHHHHhcCcc
Q psy11989 58 MVLLIYFFLGVSIISDRFMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGF 137 (342)
Q Consensus 58 ~~~lly~F~~l~iv~d~F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~g~s~PEl~~s~I~~~~~~~ 137 (342)
++.++..+..+..-+|.|+++.+.|+++.+ .++.+.|+|++|+|||+||+++|+.+....
T Consensus 5 ~~~~~~gl~~l~~ga~~lv~~~~~ia~~lg------------------is~~viG~tiva~gTSlPEl~vsv~A~~~g-- 64 (325)
T PRK10734 5 TALLIIGLLLLVYGADRLVFAASILCRTFG------------------IPPLIIGMTVVGIGTSLPEIIVSVAASLHG-- 64 (325)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------------CCHHHHHHHHHHHHcchhHHHHHHHHHHcC--
Confidence 344556677777889999999999999964 689999999999999999999998875432
Q ss_pred ccCCCC--------------------------------------------------------------------------
Q psy11989 138 SAGELG-------------------------------------------------------------------------- 143 (342)
Q Consensus 138 ~~~d~G-------------------------------------------------------------------------- 143 (342)
++|++
T Consensus 65 -~~~ia~GnilGSni~ni~lilg~~~l~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~ 143 (325)
T PRK10734 65 -QRDLAVGTALGSNITNILLILGLAALIRPFTVHSDVLRRELPLMLLVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFI 143 (325)
T ss_pred -CCcchhhhhhhHHHHHHHHHHHHHHHhCCcccChHHHHHHHHHHHHHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHH
Confidence 22222
Q ss_pred ----------------------------------------------cceeeeccccccccccccccCcchhhhhhhhhcC
Q psy11989 144 ----------------------------------------------PNASVTNKAGTRHKVTVRVWNETVANLTLMALGS 177 (342)
Q Consensus 144 ----------------------------------------------a~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GT 177 (342)
++++|++++.+|+.+|+ ||.++|+|++|+||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~l~~gs~~lv~~~~~ia~~lgi---s~~~iG~tiva~gt 220 (325)
T PRK10734 144 VKIARLAERQGNDSLTREQLAELPREGGLPVAFLWLGIALIIMPMATRMVIDNATVLANYFAI---SELTIGLTVIAIGT 220 (325)
T ss_pred HHHHHhcccccccccchhhhccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---cHHHHHHHHHHHhc
Confidence 22333334444556666 99999999999999
Q ss_pred ChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHHHHHHHH
Q psy11989 178 SAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWLYAILAV 257 (342)
Q Consensus 178 SaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v 257 (342)
|+||+++|+.+++ +++.|+++||++|||+||+++++|+++++.|. .+...++.+| .+.++ .+..+.+...
T Consensus 221 slPE~~~sv~a~~---~g~~~~avgniiGsnifni~~~lg~~~l~~~~----~v~~~~~~~~--~~~~~-~~~~~~~~~~ 290 (325)
T PRK10734 221 SLPELATAIAGAR---KGENDIAVGNIIGSNIFNIVIVLGLPALISPG----EINPLAFSRD--YWVML-LVSVIFALLC 290 (325)
T ss_pred cHHHHHHHHHHHH---cCCCchHHHHHHhHHHHHHHHHHHHHHhhccc----cccchhHHHH--HHHHH-HHHHHHHHHH
Confidence 9999999999998 99999999999999999999999999998763 2222234455 22222 1222222222
Q ss_pred h-cCCeehhHHHHHHHHHHHHHHHHHHhc
Q psy11989 258 F-SPGIVEVWEGLLTFLFFPATVLTAYFA 285 (342)
Q Consensus 258 ~-~~g~It~~EgllLLllY~~YV~~~~~~ 285 (342)
. .++++.|+||..|+.+|+.|+...++.
T Consensus 291 ~~~~~~i~r~~G~~Ll~~Y~~y~~~l~~~ 319 (325)
T PRK10734 291 WRRKRRIGRGAGALLLGGFIVWLAMLYWL 319 (325)
T ss_pred HHcCCccChHHHHHHHHHHHHHHHHHHhc
Confidence 3 578899999999999999999887753
No 7
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.92 E-value=7.7e-25 Score=210.90 Aligned_cols=189 Identities=22% Similarity=0.345 Sum_probs=142.1
Q ss_pred HHHHHHHHHHHHHHHHHhh-hhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhhcCchhHHHHHHHHHhc
Q psy11989 56 VYMVLLIYFFLGVSIISDR-FMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWG 134 (342)
Q Consensus 56 ly~~~lly~F~~l~iv~d~-F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~g~s~PEl~~s~I~~~~ 134 (342)
+|++..+++.+.+...+.+ |.|+.+.|+++++ ++++++|+|++|+|+|+||+++++.+...
T Consensus 1 ~~~~~~~~~~~~~~~~~a~~lv~~~~~ia~~lg------------------l~~~v~G~tlla~gtslPEl~~si~a~~~ 62 (307)
T TIGR00367 1 LILIGYLILGLILLIYGADLFVKSSVRIARKLG------------------ISPLIIGVTVVAIGTSLPELFTSLIASLI 62 (307)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------------CCHHHHHHHHHHHHcccHHHHHHHHHHhc
Confidence 3566666666555555555 9999999999964 78999999999999999999999987554
Q ss_pred CccccCCCCcc---------------------------------------------------------------------
Q psy11989 135 KGFSAGELGPN--------------------------------------------------------------------- 145 (342)
Q Consensus 135 ~~~~~~d~Ga~--------------------------------------------------------------------- 145 (342)
. ++|.+-.
T Consensus 63 g---~~~la~g~ilGS~l~n~l~i~g~~~l~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl 139 (307)
T TIGR00367 63 G---QPDIGVGNVIGSNIFNILLILGLSAIFSPIIVDTDWLRRDFSFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYL 139 (307)
T ss_pred C---CCCeehhhhhhHHHHHHHHHHHHHHhhcceeechHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHH
Confidence 2 2332211
Q ss_pred ------------------------------------------------eeeeccccccccccccccCcchhhhhhhhhcC
Q psy11989 146 ------------------------------------------------ASVTNKAGTRHKVTVRVWNETVANLTLMALGS 177 (342)
Q Consensus 146 ------------------------------------------------~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GT 177 (342)
.++++++.+++.+|+ ||.++|+|++|+||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~v~~~~~i~~~lgi---~~~~~g~tl~a~~t 216 (307)
T TIGR00367 140 LFLVKVERQMINDTYTEEQLDENNRRKQIFFLIVLLIIGLTGLVVGSRLLVDGAVQIAEIFGI---SEKIIGLTLLAIGT 216 (307)
T ss_pred HHHHHHHHhccccccchhhhhcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHc
Confidence 111222334445666 99999999999999
Q ss_pred ChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHHHHHHHH
Q psy11989 178 SAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWLYAILAV 257 (342)
Q Consensus 178 SaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v 257 (342)
|+||+++++.+++ +++.|+++||++|||+||+++++|++.++.| .++++..+.||. +.+.....+..+.+
T Consensus 217 s~PE~~~~i~a~~---~g~~~~avg~~iGs~i~~~~~~~g~~~~~~~----~~~~~~~~~~~~---~~~~~~~~~~~~~~ 286 (307)
T TIGR00367 217 SLPELVVSVAAAR---KGLGDIAVGNVIGSNIFNILVGLGVPSLFYP----IPVEPLAYSLDA---PVMVIVTLVLMLVF 286 (307)
T ss_pred ccHHHHHHHHHHH---cCCCchHHHHHhhhHHHHHHHHHHHHHHhcc----cccchhHHHHHH---HHHHHHHHHHHHHH
Confidence 9999999999998 8999999999999999999999999999865 344444555772 11111112233444
Q ss_pred hcCCeehhHHHHHHHHHHHHH
Q psy11989 258 FSPGIVEVWEGLLTFLFFPAT 278 (342)
Q Consensus 258 ~~~g~It~~EgllLLllY~~Y 278 (342)
.++++++||||+.++.+|+.|
T Consensus 287 ~~~~~i~~~~g~~l~~~Y~~y 307 (307)
T TIGR00367 287 KTSMKLGRWEGFLLLALYIAY 307 (307)
T ss_pred HhcCeehHHHHHHHHHHHHhC
Confidence 568999999999999999887
No 8
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.90 E-value=1.2e-23 Score=204.95 Aligned_cols=196 Identities=20% Similarity=0.329 Sum_probs=153.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhhcCchhHHHHHHHHHh
Q psy11989 54 GVVYMVLLIYFFLGVSIISDRFMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIW 133 (342)
Q Consensus 54 ~~ly~~~lly~F~~l~iv~d~F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~g~s~PEl~~s~I~~~ 133 (342)
..+.+...+-.+..+..-+|.|+++.+.|+++.+ .++.+.|+|+.|+|||+||+.+|..++.
T Consensus 8 ~~~~~~~~i~~l~llv~~ad~lv~~a~~Is~~~g------------------i~~~~iG~tiva~gTslPE~~vs~~a~l 69 (320)
T COG0530 8 LLLLILLLIAGLILLVKGADLLVDAASAISRRFG------------------ISELIIGLTIVAFGTSLPELAVSLVAAL 69 (320)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------------CCHHHHHHHHHHHHccChHHHHHHHHHH
Confidence 3444455556667777888889999999999843 3567999999999999999999999887
Q ss_pred cCccccCCC-----------------------------------------------------------------------
Q psy11989 134 GKGFSAGEL----------------------------------------------------------------------- 142 (342)
Q Consensus 134 ~~~~~~~d~----------------------------------------------------------------------- 142 (342)
... +|.
T Consensus 70 ~g~---~~iavGnvlGSni~ni~li~gl~ali~~~~~~~~~~~r~~~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~y 146 (320)
T COG0530 70 SGN---PDIAVGNVLGSNIFNILLILGLAALIAPLKVDSDVLRREIPFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLY 146 (320)
T ss_pred cCC---CCeeeehhhhHHHHHHHHHHHHHHHHhhhHhhhhHHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHH
Confidence 642 222
Q ss_pred -------------------------------------------CcceeeeccccccccccccccCcchhhhhhhhhcCCh
Q psy11989 143 -------------------------------------------GPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSA 179 (342)
Q Consensus 143 -------------------------------------------Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSa 179 (342)
|++++|++++++|+.+|+ ||.++|+|++|+|||+
T Consensus 147 l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~l~~g~~llv~~~~~iA~~~gi---~e~~igltivaigTSl 223 (320)
T COG0530 147 LYYLLKLSREAEEPGEQENERPKKGSLRKALLVLVIGLILLVVGSELLVDGAVEIAEIFGI---SELIIGLTIVAIGTSL 223 (320)
T ss_pred HHHHHHhhhhccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CHHHHHHHHHHHHccc
Confidence 344444667788888888 9999999999999999
Q ss_pred hHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHHHHHHH-Hh
Q psy11989 180 PEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWLYAILA-VF 258 (342)
Q Consensus 180 PEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~-v~ 258 (342)
||+++++.+++ ++++|+++||++|||+||+++++|+.+++.|. ...+..+.+|. + +++....++++. ..
T Consensus 224 PElv~si~a~r---kg~~~iavGnviGSni~n~~~~lGi~~~~~~~----~~~~~~~~~~~--~-vmi~~~l~l~l~~~~ 293 (320)
T COG0530 224 PELVVSIVAAR---KGEDDIAVGNVIGSNIFNILIVLGISALIGPI----TVEPSALLVDA--P-VLILVTLLLLLFLAR 293 (320)
T ss_pred HHHHHHHHHHH---cCCCCeEEeeecchHHHHHHHHHhHHHhcccc----ccCchhHHHHH--H-HHHHHHHHHHHHHHh
Confidence 99999999998 99999999999999999999999999999772 22223344552 2 222222222222 36
Q ss_pred cCCeehhHHHHHHHHHHHHHHHHHH
Q psy11989 259 SPGIVEVWEGLLTFLFFPATVLTAY 283 (342)
Q Consensus 259 ~~g~It~~EgllLLllY~~YV~~~~ 283 (342)
.+++++|+||..++..|+.|+.+.+
T Consensus 294 ~~~~i~r~~g~~ll~~Y~~~~~~~~ 318 (320)
T COG0530 294 RRRRIGRKEGLLLLGLYIVYVALLI 318 (320)
T ss_pred ccCcchhHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999999998765
No 9
>PRK10734 putative calcium/sodium:proton antiporter; Provisional
Probab=99.89 E-value=7e-24 Score=206.51 Aligned_cols=129 Identities=19% Similarity=0.261 Sum_probs=106.3
Q ss_pred CCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhe
Q psy11989 142 LGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVA 221 (342)
Q Consensus 142 ~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~L 221 (342)
+|+|++|++++.+|+++|+ ||.++|+|++|+|||+||+++|+.|++ ++++|+++||++|||+||+++++|++++
T Consensus 17 ~ga~~lv~~~~~ia~~lgi---s~~viG~tiva~gTSlPEl~vsv~A~~---~g~~~ia~GnilGSni~ni~lilg~~~l 90 (325)
T PRK10734 17 YGADRLVFAASILCRTFGI---PPLIIGMTVVGIGTSLPEIIVSVAASL---HGQRDLAVGTALGSNITNILLILGLAAL 90 (325)
T ss_pred HHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHcchhHHHHHHHHHH---cCCCcchhhhhhhHHHHHHHHHHHHHHH
Confidence 6899999999999999999 999999999999999999999999998 8999999999999999999999999999
Q ss_pred eccCCceeeecceeEEEehhhHHHHHHHHHHHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHh
Q psy11989 222 VIPNGEVRKIKHLRVFFVTATWSVFAYIWLYAILAVFSPGIVEVWEGLLTFLFFPATVLTAYF 284 (342)
Q Consensus 222 i~p~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v~~~g~It~~EgllLLllY~~YV~~~~~ 284 (342)
+.| .+++.. .+|+. .+.+. ...+++..+.++++++|++|++++++|+.|+.+.++
T Consensus 91 ~~~----~~~~~~-~~~~~--~~~ll-~~~~~~~~~~~~~~l~~~~g~~ll~~~~~yl~~~~~ 145 (325)
T PRK10734 91 IRP----FTVHSD-VLRRE--LPLML-LVSVLAGSVLYDGQLSRSDGIFLLLLAVLWLLFIVK 145 (325)
T ss_pred hCC----cccChH-HHHHH--HHHHH-HHHHHHHHHHHCCcCcHHHHHHHHHHHHHHHHHHHH
Confidence 866 233332 23332 11211 112223334578999999999999999999998864
No 10
>COG0530 ECM27 Ca2+/Na+ antiporter [Inorganic ion transport and metabolism]
Probab=99.87 E-value=4.6e-23 Score=200.76 Aligned_cols=134 Identities=18% Similarity=0.320 Sum_probs=113.2
Q ss_pred CCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhh
Q psy11989 140 GELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALC 219 (342)
Q Consensus 140 ~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~ 219 (342)
-=+|||+++++++.+++++|+ ||.++|+|++|+|||+||+++|+.|++ .+++|+++||++|||++|+++++|++
T Consensus 22 lv~~ad~lv~~a~~Is~~~gi---~~~~iG~tiva~gTslPE~~vs~~a~l---~g~~~iavGnvlGSni~ni~li~gl~ 95 (320)
T COG0530 22 LVKGADLLVDAASAISRRFGI---SELIIGLTIVAFGTSLPELAVSLVAAL---SGNPDIAVGNVLGSNIFNILLILGLA 95 (320)
T ss_pred HHHHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHccChHHHHHHHHHH---cCCCCeeeehhhhHHHHHHHHHHHHH
Confidence 348999999999999999999 999999999999999999999999999 88999999999999999999999999
Q ss_pred heeccCCceeeecceeEEEehhhHHHHHHHH-HHHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHhcccc
Q psy11989 220 VAVIPNGEVRKIKHLRVFFVTATWSVFAYIW-LYAILAVFSPGIVEVWEGLLTFLFFPATVLTAYFADKK 288 (342)
Q Consensus 220 ~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~-llll~~v~~~g~It~~EgllLLllY~~YV~~~~~~d~~ 288 (342)
+++.|. +.+...+.||. .++.. .+.+..+..++++++++|+.++..|++|+.+.++..|+
T Consensus 96 ali~~~----~~~~~~~~r~~-----~f~ll~~~~~~~~~~~~~~~~~~gi~ll~l~~~yl~~~~~~~~~ 156 (320)
T COG0530 96 ALIAPL----KVDSDVLRREI-----PFLLLATLILLLVLLDGHLSRLDGIVLLLLYVLYLYYLLKLSRE 156 (320)
T ss_pred HHHhhh----HhhhhHHHHhh-----HHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999763 33333445662 22222 33445677899999999999999999999998754443
No 11
>TIGR00367 K+-dependent Na+/Ca+ exchanger related-protein. This alignment models a family of bacterial and archaeal proteins that is homologous, except for lacking a central region of ~ 250 amino acids and an N-terminal region of 100 residues, to a functionally proven potassium-dependent sodium-calcium exchanger of the rat.
Probab=99.86 E-value=1.9e-22 Score=194.32 Aligned_cols=130 Identities=18% Similarity=0.328 Sum_probs=110.3
Q ss_pred CCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhe
Q psy11989 142 LGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVA 221 (342)
Q Consensus 142 ~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~L 221 (342)
.++|+++++++.+|+++|+ ||.++|+|++|+|||+||+++++.+++ ++++|+++||++|||+||+++++|+|.+
T Consensus 16 ~~a~~lv~~~~~ia~~lgl---~~~v~G~tlla~gtslPEl~~si~a~~---~g~~~la~g~ilGS~l~n~l~i~g~~~l 89 (307)
T TIGR00367 16 YGADLFVKSSVRIARKLGI---SPLIIGVTVVAIGTSLPELFTSLIASL---IGQPDIGVGNVIGSNIFNILLILGLSAI 89 (307)
T ss_pred HHHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHcccHHHHHHHHHHh---cCCCCeehhhhhhHHHHHHHHHHHHHHh
Confidence 6889999999999999999 999999999999999999999999998 8999999999999999999999999999
Q ss_pred eccCCceeeecceeEEEehhhHHHHHHHH-HHHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHhcc
Q psy11989 222 VIPNGEVRKIKHLRVFFVTATWSVFAYIW-LYAILAVFSPGIVEVWEGLLTFLFFPATVLTAYFAD 286 (342)
Q Consensus 222 i~p~~~~~~I~~~~v~rD~~~~~l~~yi~-llll~~v~~~g~It~~EgllLLllY~~YV~~~~~~d 286 (342)
+.| .+++++.+.||. .+++. ...+..+.++++++++||++++..|++|+.+.+..+
T Consensus 90 ~~~----~~~~~~~~~~d~-----~~~l~~~~~~~~~~~~g~i~~~~gi~ll~~Yv~yl~~~~~~~ 146 (307)
T TIGR00367 90 FSP----IIVDTDWLRRDF-----SFYLLVSILLLFFGLDGPISRLDGVVLLFLYVVYLLFLVKVE 146 (307)
T ss_pred hcc----eeechHHHHHHH-----HHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 864 455555566772 22222 223344557899999999999999999998886543
No 12
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.80 E-value=6.6e-20 Score=181.15 Aligned_cols=128 Identities=15% Similarity=0.139 Sum_probs=102.9
Q ss_pred CCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhe
Q psy11989 142 LGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVA 221 (342)
Q Consensus 142 ~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~L 221 (342)
.+++++|+++..+|+++|+ ||.++|+|++|+|||+||+++|+.+++ +++.|+++||++|||+||+++++|++++
T Consensus 235 ~~a~~lv~~~~~ia~~~gi---s~~~iGl~lvai~tslpE~~~si~aa~---~g~~~lavg~~iGSni~n~l~vl~~~~l 308 (365)
T TIGR00846 235 LLAEYLVDTIESAVESWGL---SVAFIGVILAPIVGNAAEHAGAVIAAF---KNKLDIALGVALGSALQIALFVVPVVVL 308 (365)
T ss_pred HHHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHhcccHHHHHHHHHHH---cCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999 999999999999999999999999998 8999999999999999999999999998
Q ss_pred eccC-CceeeecceeEEEehhhHHHHHHHHHHHHHHHhcCCeehhHHHHHHHHHHHHHHHH
Q psy11989 222 VIPN-GEVRKIKHLRVFFVTATWSVFAYIWLYAILAVFSPGIVEVWEGLLTFLFFPATVLT 281 (342)
Q Consensus 222 i~p~-~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v~~~g~It~~EgllLLllY~~YV~~ 281 (342)
+.|. +++.. ..+|...+.+++ ...+++.....+++++|+||++++.+|++|+..
T Consensus 309 i~~~~~~~~~-----l~~~~~~~~~l~-~s~~~~~~~~~~~~~~~~eG~~ll~~Y~~~~~~ 363 (365)
T TIGR00846 309 VAWMLGIPMD-----LNFGAPETVALA-LSVFLTTITLQDGRSNYLEGAVLLALYIIIAML 363 (365)
T ss_pred HHHhcCCcee-----ccCcHHHHHHHH-HHHHHHHHHHcCCcCcHHHHHHHHHHHHHHHHH
Confidence 8753 22221 223311111211 112233445579999999999999999999864
No 13
>KOG1307|consensus
Probab=99.79 E-value=9.3e-20 Score=183.38 Aligned_cols=120 Identities=15% Similarity=0.241 Sum_probs=88.5
Q ss_pred cCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheecc----CCceeeecceeEEE
Q psy11989 163 WNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIP----NGEVRKIKHLRVFF 238 (342)
Q Consensus 163 lSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p----~~~~~~I~~~~v~r 238 (342)
||+.++|+|++|.|||.||+.+|++-++ +|-+|+|+++-+|||+|.+++-+++..+... .+.+..++...++.
T Consensus 456 Ip~eIMGLTiLAAGTSIPDlitSvIVAR---KGlGDMAVSsSiGSNiFDI~VGLplPWLL~~lI~~~~~~i~vsS~GL~c 532 (588)
T KOG1307|consen 456 IPDEIMGLTILAAGTSIPDLITSVIVAR---KGLGDMAVSSSIGSNIFDILVGLPLPWLLYTLIYGFKSKISVSSNGLVC 532 (588)
T ss_pred CCHHHhhhhhhhcCCchHHhhHhhhhcc---cccccceeecccccchhheeecCCcHHHHHHHHhhcCCceeecCCceeh
Confidence 9999999999999999999999999887 9999999999999999999999999876531 11114444444433
Q ss_pred ehhhHHHHHHHH-HHHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHhcccc
Q psy11989 239 VTATWSVFAYIW-LYAILAVFSPGIVEVWEGLLTFLFFPATVLTAYFADKK 288 (342)
Q Consensus 239 D~~~~~l~~yi~-llll~~v~~~g~It~~EgllLLllY~~YV~~~~~~d~~ 288 (342)
.. -+++..+ .+.+.+....-+..+.-|.+++++|.+|+.+.+....+
T Consensus 533 si---~lLf~ml~v~v~~ia~~rWrMnK~lG~~m~llY~~Fl~~svmlE~~ 580 (588)
T KOG1307|consen 533 SI---GLLFAMLIVLVLGIALSRWRMNKILGFLMILLYFVFLIISVMLETD 580 (588)
T ss_pred HH---HHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHhhhheecc
Confidence 21 1222122 22333444566788889999999999999887654433
No 14
>KOG2399|consensus
Probab=99.76 E-value=4.3e-19 Score=184.90 Aligned_cols=149 Identities=23% Similarity=0.436 Sum_probs=126.7
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhh-hhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhhcCchhHHHHH
Q psy11989 50 RVMRGVVYMVLLIYFFLGVSIISDR-FMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLS 128 (342)
Q Consensus 50 ~~~~~~ly~~~lly~F~~l~iv~d~-F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~g~s~PEl~~s 128 (342)
+....++.+.++++.|..++++||+ |+|+++.+++.+ .+
T Consensus 100 ~i~~i~~~~~~~~~lf~~l~~~a~~yFspsL~~is~~L---------------------------~l------------- 139 (605)
T KOG2399|consen 100 RIILIILLVLWLLFLFYLLGITADDYFSPSLSSISSLL---------------------------RL------------- 139 (605)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHh---------------------------cC-------------
Confidence 4566777788888999999999999 999999999984 33
Q ss_pred HHHHhcCccccCCCCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhh
Q psy11989 129 VIEIWGKGFSAGELGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSA 208 (342)
Q Consensus 129 ~I~~~~~~~~~~d~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSn 208 (342)
||.|||+|++|+||++||+++|+.|..+..+ +|+|.|+++|++
T Consensus 140 -----------------------------------~esvAGVTlLa~GNgapDvf~siasv~~~~~--~~~~~~~~lg~a 182 (605)
T KOG2399|consen 140 -----------------------------------SESVAGVTLLAFGNGAPDVFASIASVRGTPK--GDLALNDLLGGA 182 (605)
T ss_pred -----------------------------------CCceeeEEEeeecCCCchHHhhhheeecCCC--cccHHHHHhccc
Confidence 9999999999999999999999999875433 399999999999
Q ss_pred HHHHHHHHHhhheeccCCceeeecceeEEEehhhHHHHHHHHH--HHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHh
Q psy11989 209 AYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWSVFAYIWL--YAILAVFSPGIVEVWEGLLTFLFFPATVLTAYF 284 (342)
Q Consensus 209 IFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~l~~yi~l--lll~~v~~~g~It~~EgllLLllY~~YV~~~~~ 284 (342)
+|...++.|+..+..| ++++..++.|| +.||+.. ++.+.....+++++|.++.++..|..|+.....
T Consensus 183 lFVt~~V~G~i~~t~p----Fki~~~~~iRD-----i~Fll~al~~l~~~~~~~~~v~~~~~l~fl~~y~~Yv~~vi~ 251 (605)
T KOG2399|consen 183 LFVTTVVVGLIILTKP----FKINANSFIRD-----ILFLLLALLFLAFILLRGNKVEIWMALTFLGIYVVYVVTVIV 251 (605)
T ss_pred eeEEeeEeeeeeeecc----eeeccchhHHH-----HHHHHHHHHHHHHHHhcCCceeHHhHHHHhHHHHHHHHHHHH
Confidence 9999999999887765 88999999999 5555553 233445556699999999999999999998764
No 15
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=99.73 E-value=6.2e-19 Score=147.89 Aligned_cols=128 Identities=20% Similarity=0.306 Sum_probs=95.9
Q ss_pred CcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhee
Q psy11989 143 GPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAV 222 (342)
Q Consensus 143 Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li 222 (342)
++++++++.+.+++++|+ |+.++|+|++|++||+||+++++.++. +++.++++|+++||+++|++++.|++.+.
T Consensus 6 ~a~~l~~~~~~i~~~~~i---~~~~~g~~lla~~~slpe~~~~~~~~~---~g~~~la~~~~~Gs~~~~~~l~~gl~~l~ 79 (140)
T PF01699_consen 6 AAEFLVESVEIIAERLGI---SESFLGLTLLALATSLPELIVAISAAR---KGNPDLAIGNIIGSNIFNITLIVGLILLF 79 (140)
T ss_dssp HHHHHHHHHHHHHCCCTB----HCCHHHCCHHCCCCHHHHHHHHHHHC---TT-CHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCC---CHHHHHHHHHHHHcCHHHHHHHHHHhh---ccccchhhhcccchHHHHHHHHHHHHHHh
Confidence 467788899999999999 999999999999999999999999987 88999999999999999999999999988
Q ss_pred ccCCc-eeeecceeEEEehhhHHHHHHHHH-HHHHHHhc----CCeehhHHHHHHHHHHHHHHHH
Q psy11989 223 IPNGE-VRKIKHLRVFFVTATWSVFAYIWL-YAILAVFS----PGIVEVWEGLLTFLFFPATVLT 281 (342)
Q Consensus 223 ~p~~~-~~~I~~~~v~rD~~~~~l~~yi~l-lll~~v~~----~g~It~~EgllLLllY~~YV~~ 281 (342)
.+... ..+.++.+..+| ..++... .++..+.. ++++++++|++++.+|++|+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~y~~y~~~ 139 (140)
T PF01699_consen 80 GPIKLGSQTIDWSSFTRD-----FSFLLLAILLLILFFLAFIRDGRISRFEGLVLLILYILYLVF 139 (140)
T ss_dssp S-B---------HHHHHH-----HHHHHHHHHHHHHCCT---HCT-BSHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchHHHH-----HHHHHHHHHHHHHHHHHHHcCCeEhHHHHHHHHHHHHHHHhc
Confidence 65321 112334444444 1222221 22333333 8999999999999999999875
No 16
>TIGR00846 caca2 calcium/proton exchanger. This model is generated from the calcium ion/proton exchangers of the CacA family.
Probab=99.68 E-value=1.9e-17 Score=163.65 Aligned_cols=135 Identities=13% Similarity=0.123 Sum_probs=99.4
Q ss_pred CCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhe
Q psy11989 142 LGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVA 221 (342)
Q Consensus 142 ~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~L 221 (342)
.|+|+++++++++|+++|+ | +|.+++|+|||+||+++|+.|+. ++++|++.||++|||++|+++|+|+|.+
T Consensus 49 ~~a~~lv~~a~~lA~~~G~---~---vG~ll~a~~ts~pEL~vsi~A~~---~g~~~la~gnivGS~i~NilLIlGl~~l 119 (365)
T TIGR00846 49 PLAERVSFATEQLAHRLGP---T---LGGLLNATFGNAVELIISLMALG---EGKVEVVRASLLGSILSNLLLVLGLSLF 119 (365)
T ss_pred HHHHHHHHHHHHHHHHhCC---c---hhhHHHHHHhHHHHHHHHHHHcc---CCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999998 6 67778899999999999999987 8999999999999999999999999999
Q ss_pred eccCCceeeecceeEEEehhhH-HHHHHHHHH--HHHH---HhcCC-----eehhHHHHHHHHHHHHHHHHHHhcccc
Q psy11989 222 VIPNGEVRKIKHLRVFFVTATW-SVFAYIWLY--AILA---VFSPG-----IVEVWEGLLTFLFFPATVLTAYFADKK 288 (342)
Q Consensus 222 i~p~~~~~~I~~~~v~rD~~~~-~l~~yi~ll--ll~~---v~~~g-----~It~~EgllLLllY~~YV~~~~~~d~~ 288 (342)
+.|.... ++..+.|+.... +.+..+..+ .+.. ...++ .+++++|++++++|++|+.+.++.+|+
T Consensus 120 ~~~~~~~---~~~~~~~~~~~~~~~ll~~~~~~l~lp~~~~~~~~~~~~~~~ls~~~giill~ly~~yl~~~~~~~~~ 194 (365)
T TIGR00846 120 LGGIKNI---REQRFNRGAAQVNSALLLLAILSLVLPLALPAGKPGQDSILGLSRGIAIVMLILYGAFLVFQLVTHRQ 194 (365)
T ss_pred HhccCcc---ceeeccHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 8764210 112233442100 011111111 1111 12344 599999999999999999888765543
No 17
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.65 E-value=1.2e-16 Score=156.98 Aligned_cols=132 Identities=15% Similarity=0.149 Sum_probs=98.0
Q ss_pred CCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhe
Q psy11989 142 LGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVA 221 (342)
Q Consensus 142 ~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~L 221 (342)
..+++++++++++|+++| +.+.|+|.+++|| +||+++|+.|+. +++.|++.||++|||++|+++|+|+|.+
T Consensus 31 pla~~l~~~~~~lA~~~g-----~~vggl~~~~~gt-~pEL~vsi~A~~---~g~~~i~~gnivGS~i~NllLilGls~l 101 (349)
T TIGR00378 31 PLAAIMGNATEELADKAG-----PTIGGLLNATFGN-AVELIVSIIALK---EGLVRIVQASLTGSLLGNLLLVLGLCFF 101 (349)
T ss_pred HHHHHHHHHHHHHHHHcC-----chHHHHHHHhhcc-HHHHHHHHHHHH---cCChhhhHHHHHHHHHHhHHHHHHHHHH
Confidence 457889999999999998 6899999999999 999999999998 8999999999999999999999999999
Q ss_pred eccCCceeeecceeEEEehh--hHHHHHHHHHHHHHH-H---hc----CC---eehhHHHHHHHHHHHHHHHHHHhcc
Q psy11989 222 VIPNGEVRKIKHLRVFFVTA--TWSVFAYIWLYAILA-V---FS----PG---IVEVWEGLLTFLFFPATVLTAYFAD 286 (342)
Q Consensus 222 i~p~~~~~~I~~~~v~rD~~--~~~l~~yi~llll~~-v---~~----~g---~It~~EgllLLllY~~YV~~~~~~d 286 (342)
+.|.. .++..+-++.+ ..+++......+++. . .. ++ .+++++|++++++|++|+.+.++.+
T Consensus 102 iggl~----~~~q~~~~~~a~~~~~ll~la~~~l~lp~~~~~~~~~~~~~~~~~ls~~~aiill~lY~~~L~~~l~~h 175 (349)
T TIGR00378 102 FGGLN----YKQQTFNQTAARTNSSLLAIACVALLIPAARATLSHGKEDGKILNLSRGTSIVIIIVYVLFLYFQLGTH 175 (349)
T ss_pred Hhccc----cceeecCHHHHHHHHHHHHHHHHHHHhhhHHHhcCCCccchHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 87632 22222223311 012221111111111 0 01 33 5899999999999999998876533
No 18
>TIGR00378 cax calcium/proton exchanger (cax).
Probab=99.65 E-value=4.5e-16 Score=152.95 Aligned_cols=127 Identities=13% Similarity=0.088 Sum_probs=98.5
Q ss_pred CCcceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhhe
Q psy11989 142 LGPNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVA 221 (342)
Q Consensus 142 ~Ga~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~L 221 (342)
.+++++|+++..+++.+|+ ||.++|+|++|+|||+||+++++.+++ +++.|+++||++|||++|+++++++..+
T Consensus 219 ~~a~~lv~~~~~~~~~~gi---~~~~igl~iva~~tslpE~~~ai~aa~---~~~~~~ai~~~~GS~i~~~l~v~p~lvl 292 (349)
T TIGR00378 219 FCSEFLVGTIDNVVESTGL---SKLFIGVIVIPIVGNAAEHATAVLVAM---KDKMDLALGVAIGSSLQIALFVAPVLVI 292 (349)
T ss_pred HHHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHhcccHHHHHHHHHHH---cCCcccHHHHHHhHHHHHHHHHHHHHHH
Confidence 5789999999999999999 999999999999999999999999998 8999999999999999999999888444
Q ss_pred ecc-CCceeeecceeEEEehhhHHHHHHHHHHHHHHHhcCCeehhHHHHHHHHHHHHHHH
Q psy11989 222 VIP-NGEVRKIKHLRVFFVTATWSVFAYIWLYAILAVFSPGIVEVWEGLLTFLFFPATVL 280 (342)
Q Consensus 222 i~p-~~~~~~I~~~~v~rD~~~~~l~~yi~llll~~v~~~g~It~~EgllLLllY~~YV~ 280 (342)
+.- .+++..+. .+......++ ...++......||+.+|.||..++.+|+++-.
T Consensus 293 ~~~~~~~~~~L~-----f~~~~~~~l~-~~v~~~~~~~~dg~~n~leG~~ll~~Y~i~~~ 346 (349)
T TIGR00378 293 VGWMIDVPMTLN-----FSTFELVALF-IAVLLSNYISLDGESNWLEGVMLLAMYIIIAM 346 (349)
T ss_pred HHHHhCCCceec-----CcHHHHHHHH-HHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHH
Confidence 321 11222211 1211111221 22334445578999999999999999999865
No 19
>TIGR00845 caca sodium/calcium exchanger 1. This model is specific for the eukaryotic sodium ion/calcium ion exchangers of the Caca family
Probab=99.58 E-value=1.3e-15 Score=164.72 Aligned_cols=130 Identities=18% Similarity=0.270 Sum_probs=93.0
Q ss_pred ceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCC-CCCccchhhhhhhHHHHHHHHHhhheec
Q psy11989 145 NASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFS-AGELGPGTIVGSAAYNLFVIIALCVAVI 223 (342)
Q Consensus 145 ~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g-~~dIgvGnIVGSnIFNillIlGv~~Li~ 223 (342)
..++++++.+|..+|+ |+.++|+|++|+|||+||+++|++|++ ++ ..|+++||++|||+||+++++|+++++.
T Consensus 771 ~~i~~~a~~ig~~~gi---~~~viGlt~vA~GTSlPEl~~S~~aA~---~~~~~d~aigNv~GSNifNi~l~lGv~~~i~ 844 (928)
T TIGR00845 771 AFIGDLASHFGCTIGL---KDSVTAVVFVALGTSVPDTFASKVAAT---QDQYADASIGNVTGSNAVNVFLGIGVAWSIA 844 (928)
T ss_pred HHHHHHHHHHHHHcCC---CHHhhhheeeeEecCcHHHHHHHHHHH---cCCCCceeEEeecchHHHHHHHHHHHHHHHh
Confidence 4567889999999999 999999999999999999999999998 54 5999999999999999999999999886
Q ss_pred cC-----CceeeecceeEEEehhhHHHHHHHHHHHH-HHHhcC-----C------eehhHHHHHHHHHHHHHHHHHH
Q psy11989 224 PN-----GEVRKIKHLRVFFVTATWSVFAYIWLYAI-LAVFSP-----G------IVEVWEGLLTFLFFPATVLTAY 283 (342)
Q Consensus 224 p~-----~~~~~I~~~~v~rD~~~~~l~~yi~llll-~~v~~~-----g------~It~~EgllLLllY~~YV~~~~ 283 (342)
+. +.+..+....+.+|. ++++...++++ +++... | .-.+..+.+++.++.+|++...
T Consensus 845 ~~~~~~~~~~~~V~~~~l~~~v---~l~~~~a~l~~~vl~~rr~~~~g~elggp~~~~~~~~~~~~~lw~~y~~~s~ 918 (928)
T TIGR00845 845 AIYHAANGTQFKVSPGTLAFSV---TLFTIFAFICIGVLLYRRRPEIGGELGGPRTAKLLTSALFVLLWLLYILFSS 918 (928)
T ss_pred hhhhcccCceEEECccchhHHH---HHHHHHHHHHHHHHHHhhcccccceeCCCCCcchhhhHHHHHHHHHHHHHHH
Confidence 42 334455543333442 12221111121 222221 1 1234457778888888887654
No 20
>TIGR00927 2A1904 K+-dependent Na+/Ca+ exchanger.
Probab=99.56 E-value=1.3e-15 Score=163.80 Aligned_cols=134 Identities=15% Similarity=0.197 Sum_probs=99.0
Q ss_pred cceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheec
Q psy11989 144 PNASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVI 223 (342)
Q Consensus 144 a~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~ 223 (342)
+-.+|+.+..++..+|| |++++|+||+|+|||+||+++|+++++ +|.+|+|++|++|||+||+++.+|+..++.
T Consensus 949 SyilV~~at~IG~vlGI---se~VmGlTfLA~GTSIPDlisSvivAr---kG~gdMAVan~iGSNIFnIllgLGlPWlI~ 1022 (1096)
T TIGR00927 949 SYLMVWWAHQVGETIGI---SEEIMGLTILAAGTSIPDLITSVIVAR---KGLGDMAVSSSVGSNIFDITVGLPVPWLLF 1022 (1096)
T ss_pred HHHHHHHHHHhhhhcCC---ChhhhhhhhhhhhcccHHHHHHHHHHH---ccCCcceeeeccccchheeeeeccHHHHHH
Confidence 44567788999999999 999999999999999999999999998 899999999999999999999999976543
Q ss_pred cC---CceeeecceeEEEehhhHHHHHHHHHH--HH-HHHhcCCeehhHHHHHHHHHHHHHHHHHHhcccc
Q psy11989 224 PN---GEVRKIKHLRVFFVTATWSVFAYIWLY--AI-LAVFSPGIVEVWEGLLTFLFFPATVLTAYFADKK 288 (342)
Q Consensus 224 p~---~~~~~I~~~~v~rD~~~~~l~~yi~ll--ll-~~v~~~g~It~~EgllLLllY~~YV~~~~~~d~~ 288 (342)
.. ..+..++... +..++++.+..+ ++ .+.+..-+++|+-|++++++|++|+++.+....+
T Consensus 1023 ~li~g~~pV~V~S~G-----L~~sI~LLF~~LlflissI~l~kwrL~R~lGivlLvlYvvFLV~aiLiE~~ 1088 (1096)
T TIGR00927 1023 SLINGLQPVPVSSNG-----LFCAIVLLFLMLLFVISSIASCKWRMNKILGFTMFLLYFVFLIISVMLEDR 1088 (1096)
T ss_pred HHhccCcceeecCcc-----HHHHHHHHHHHHHHHHHHHHhcceEEechHHHHHHHHHHHHHHHHHHHhcc
Confidence 21 1222333222 111111111111 11 1122456899999999999999999988765443
No 21
>PLN03151 cation/calcium exchanger; Provisional
Probab=98.62 E-value=4.5e-08 Score=104.05 Aligned_cols=130 Identities=8% Similarity=0.003 Sum_probs=89.6
Q ss_pred eccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCC--CccchhhhhhhHHHHHHHHHhhheeccC-
Q psy11989 149 TNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAG--ELGPGTIVGSAAYNLFVIIALCVAVIPN- 225 (342)
Q Consensus 149 ~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~--dIgvGnIVGSnIFNillIlGv~~Li~p~- 225 (342)
.-.+.+...+|+ ||.+.|+|++|.|||.||+++++.-+. +|.+ .+|+++.+|+++||+++-+|+..++...
T Consensus 505 ~~l~~iG~i~~i---s~~~lglTvlA~gnsi~Dlian~~lA~---~G~~~m~mA~~a~~ggp~F~il~glG~~~~~~~~~ 578 (650)
T PLN03151 505 ALLVAFGVIFGI---NPSILGLTVLAWGNSMGDLMSNVALAM---NGGDGVQIAMSGCYAGPMFNTLVGLGMSMLLGAWS 578 (650)
T ss_pred HHHHHHHHHhCC---CHHHHHHHHHHHHccHHHHHHHHHHHH---cCCchhHHHHHHhhhhhHHHHHHhccHHHHHHHhh
Confidence 334566678888 999999999999999999999999887 6655 4688899999999999999998776432
Q ss_pred CceeeecceeEEEehhh-HHHHHHHH-H--HHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHhccc
Q psy11989 226 GEVRKIKHLRVFFVTAT-WSVFAYIW-L--YAILAVFSPGIVEVWEGLLTFLFFPATVLTAYFADK 287 (342)
Q Consensus 226 ~~~~~I~~~~v~rD~~~-~~l~~yi~-l--lll~~v~~~g~It~~EgllLLllY~~YV~~~~~~d~ 287 (342)
+.+.. .....+... ..+.+.+. + .++.+...+-+.+|.-|+.++.+|.+|+.+......
T Consensus 579 ~~~~~---~~~~~~~~~~~~~~~L~~~L~~~li~~~~~~f~~~R~~G~~li~~Y~~Fl~~~~~~~~ 641 (650)
T PLN03151 579 KSPES---YMLPEDSSLFYTMGFLVSGLIWALVVLPRNDMRPNKTLGVGLIALYLIFLTFRVSTAM 641 (650)
T ss_pred cCCCc---eeecCCChHHHHHHHHHHHHHHHHHHHHHhCeeechhHHHHHHHHHHHHHHHHHHHHh
Confidence 11111 011122111 11111111 1 122223346789999999999999999998865443
No 22
>PRK10599 calcium/sodium:proton antiporter; Provisional
Probab=98.31 E-value=8.6e-06 Score=81.66 Aligned_cols=109 Identities=15% Similarity=0.152 Sum_probs=77.2
Q ss_pred CcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheec-cCCceeeecceeEEEehhh
Q psy11989 164 NETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVI-PNGEVRKIKHLRVFFVTAT 242 (342)
Q Consensus 164 Se~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~-p~~~~~~I~~~~v~rD~~~ 242 (342)
|+..+|+.+ |+=.-+||-.+++.+++ +++=|.+++-.+||.+--+++++-...++. -.|++..+. .+ .
T Consensus 255 p~afiGvII-aiv~~apE~~tAV~aA~---kNkmq~slnialGSsLq~illtvP~lvlig~~~g~pm~L~-----f~--~ 323 (366)
T PRK10599 255 PVAFTGFLV-ALLILSPEGLGALKAVL---NNQVQRAMNLFFGSVLATISLTVPVVTLIAFLTGNELQFG-----LG--A 323 (366)
T ss_pred CHHHHHHHH-HHHHcchhHHHHHHHHH---cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEec-----CC--H
Confidence 888888776 44445999999999998 888999999999999998888777654442 123333332 22 1
Q ss_pred HHHHHHHHH-HHHHHHhcCCeehhHHHHHHHHHHHHHHHHHH
Q psy11989 243 WSVFAYIWL-YAILAVFSPGIVEVWEGLLTFLFFPATVLTAY 283 (342)
Q Consensus 243 ~~l~~yi~l-lll~~v~~~g~It~~EgllLLllY~~YV~~~~ 283 (342)
.-....... ++....+.|||-+|.||..++.+|..|+...+
T Consensus 324 ~e~vlL~ltv~v~~~t~~dGrsN~LeG~~hL~lf~~y~~l~~ 365 (366)
T PRK10599 324 PEMVVMVASLVLCHISFSTGRTNVLNGAAHLALFAAYLMTIF 365 (366)
T ss_pred HHHHHHHHHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh
Confidence 112222222 22344458999999999999999999998764
No 23
>KOG1306|consensus
Probab=98.09 E-value=1.7e-06 Score=89.14 Aligned_cols=118 Identities=23% Similarity=0.310 Sum_probs=80.6
Q ss_pred cccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheec-----cCCceeee
Q psy11989 157 KVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVI-----PNGEVRKI 231 (342)
Q Consensus 157 ~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~-----p~~~~~~I 231 (342)
..|+ .+.|..+|++|+|||.||.|.|-+|+. .....|-++||+-|||.-|+++-+|++..+. ..|+++++
T Consensus 455 ~vgl---kdsVtA~~~vA~GTS~PDtfASkiAA~--~d~~AD~~igNvTgSNaVNvflGiG~aW~iaavy~a~~g~~f~v 529 (596)
T KOG1306|consen 455 TVGL---KDSVTAVTFVALGTSVPDTFASKIAAE--QDQTADASIGNVTGSNAVNVFLGIGLAWSIAAVYWAAQGEPFYV 529 (596)
T ss_pred eecC---ccceeeeeeehhcCCCcHHHHHHHHHh--hcccccccccceecccceeEEEeccHHHHHHHHHHHhcCceEEe
Confidence 4466 999999999999999999999999986 2456788999999999999999999876543 34567777
Q ss_pred cceeEEEehhhHHHHHHHHHHHHH--HHhcC----Ce------ehhHHHHHHHHHHHHHHHHHH
Q psy11989 232 KHLRVFFVTATWSVFAYIWLYAIL--AVFSP----GI------VEVWEGLLTFLFFPATVLTAY 283 (342)
Q Consensus 232 ~~~~v~rD~~~~~l~~yi~llll~--~v~~~----g~------It~~EgllLLllY~~YV~~~~ 283 (342)
+.-.+-+.. .+|.+..+..+ +++.. |+ -.+..+.+++.+.++|+++..
T Consensus 530 ~~g~l~Fsv----tlF~i~s~~~i~vl~~RR~~iggELGGP~~~k~~ta~~fv~lW~~yv~~s~ 589 (596)
T KOG1306|consen 530 EAGTLAFSV----TLFTIFSVVCIVVLVYRRPHIGGELGGPRGWKLLTAALFVSLWLLYVLLSS 589 (596)
T ss_pred ccceeeeeh----HHHHHHHHHhheeeEEeccccCcccCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 654443331 12222222221 12211 11 223466777788888887653
No 24
>KOG2399|consensus
Probab=98.01 E-value=2.3e-05 Score=83.03 Aligned_cols=122 Identities=16% Similarity=0.170 Sum_probs=87.4
Q ss_pred ccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccC-Cceee
Q psy11989 152 AGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPN-GEVRK 230 (342)
Q Consensus 152 ~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~-~~~~~ 230 (342)
+.+...+|+ ||.+.|+|++|.|+|.=||++.+.-+. +|.+.||.+..+|+-+||+++-+|+...+... +.+..
T Consensus 471 ~~lG~I~~l---s~siLGLTv~AWgNSiGDLIAniavak---~G~p~MAmaac~GGplfn~lvg~G~~~~i~~~~~~~~~ 544 (605)
T KOG2399|consen 471 TMLGVIFGL---SPSILGLTVLAWGNSIGDLIANIAVAK---QGYPRMAMAACIGGPLFNLLVGLGLPLVISSLQGKPGN 544 (605)
T ss_pred HHHHHHhCC---CHHHHHHHHHHHhccHHHHHHHHHHHH---cCcHHHHHHHHhhhHHHHHHHHhhHHHHHHHHhcCCCc
Confidence 345567888 999999999999999999999999887 88899999999999999999999986554311 11111
Q ss_pred --ecceeEEEehhhHHHHHHHHHH--HHHHHhcCCeehhHHHHHHHHHHHHHHHHH
Q psy11989 231 --IKHLRVFFVTATWSVFAYIWLY--AILAVFSPGIVEVWEGLLTFLFFPATVLTA 282 (342)
Q Consensus 231 --I~~~~v~rD~~~~~l~~yi~ll--ll~~v~~~g~It~~EgllLLllY~~YV~~~ 282 (342)
+...+..+.+. .+..+.++ ++.....+-++.|.-|+.++.+|+.|.++.
T Consensus 545 ~~~~~~~~l~~~~---~fL~i~l~~slv~~~~~~f~~~r~~gi~L~~lyi~f~~~~ 597 (605)
T KOG2399|consen 545 IVIPEDNSLRITL---IFLLIGLLTSLVLIPTNRFRLRRVLGIGLLSLYIAFTLIF 597 (605)
T ss_pred eecccCCceehhH---HHHHHHHHHHHHHHhcccceeccchhhHHHHHHHHHHHHH
Confidence 11123334421 22212121 234444577899999999999999995443
No 25
>KOG1397|consensus
Probab=97.97 E-value=4e-05 Score=77.30 Aligned_cols=223 Identities=16% Similarity=0.261 Sum_probs=142.6
Q ss_pred HHHHHHHHHhcchhhhhcCCCCCCCCC-CccccccCCCcccccccchhhhHHHHHHHHHHHHHHHHHHhh---h-hhhHH
Q psy11989 6 LIVALLLVFAPGFNIALENSTQSQCQD-GIILSFWDAEGEMTTLDRVMRGVVYMVLLIYFFLGVSIISDR---F-MSAIE 80 (342)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~c~~-~~~~~~~~~~~~~~~~~~~~~~~ly~~~lly~F~~l~iv~d~---F-~~sl~ 80 (342)
|+.+.+..+.|-+-+...+....+|.+ +.++|+ .|.-.+++.+...+|++.-+-- +.. | -|
T Consensus 201 Ll~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~l----------Sr~~SivmliaYi~~L~FqL~t-~~h~~~~~~~--- 266 (441)
T KOG1397|consen 201 LLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPL----------SRGCSIVMLIAYIAYLWFQLKT-ARHIWQFPTP--- 266 (441)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccCCccceeee----------hhccHHHHHHHHHHHHHHhhhc-ccccCCCCCC---
Confidence 345556666777767766667778877 556655 3444455555555555555544 221 2 33
Q ss_pred HHhccceeeEEecC--CCccceeeeeeehhhh--hhHHHHhhcCchhHHHHHHHHHhcCccccCCCCcceeeeccccccc
Q psy11989 81 VITSQEREVSVTNK--AGTRHKVTVRVWNETV--ANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPNASVTNKAGTRH 156 (342)
Q Consensus 81 ~I~~~~~~~~~~~~--~g~~~~~~~~~~~~~V--agLtlma~g~s~PEl~~s~I~~~~~~~~~~d~Ga~~lV~~a~~iA~ 156 (342)
+++. +-.|+ +++.+.+..-.|+..+ .+.| ++.|.+ ||++|+.-.....
T Consensus 267 ---~ee~--~~~d~~~s~~~e~p~is~~ss~~~L~~~T----------~~vsll-------------aeyLV~~Id~~~d 318 (441)
T KOG1397|consen 267 ---DEEE--TEQDDEVSNEDEAPNISRWSSIIWLLIMT----------LLVSLL-------------AEYLVDTIDDVSD 318 (441)
T ss_pred ---Chhc--ccccccccccCCCCcchHHHHHHHHHHHH----------HHHHHH-------------HHHHHHHHHHHHH
Confidence 2211 11121 1333444455554432 2333 334444 5788888899999
Q ss_pred cccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheecc-CCceeeeccee
Q psy11989 157 KVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIP-NGEVRKIKHLR 235 (342)
Q Consensus 157 ~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p-~~~~~~I~~~~ 235 (342)
.+|+ |+..+|+|++++=--+-|-+.+++-++ +++=|+++|-.+||++-.-+++...|.++.= .|++..++-.
T Consensus 319 s~~l---s~~FiglillpiVgNaaEh~~AI~fA~---k~kldLslgVaigsalQI~Lf~vP~~v~v~W~~g~~M~LnF~- 391 (441)
T KOG1397|consen 319 SWGL---SVKFIGLILLPIVGNAAEHAGAISFAM---KDKLDLSLGVAIGSALQIALFVVPFSVIVGWIMGISMDLNFP- 391 (441)
T ss_pred hcCC---ChhhheeeeecccCchHHhhcceeeee---cCcccchhhhhhhhhHhHHHhhhhHHHHhhhhcCCceEEecc-
Confidence 9999 999999999999888889999999777 8999999999999999988888887765531 1222222110
Q ss_pred EEEehhhHHHHHHHHHHHHHHHhcCCeehhHHHHHHHHHHHHHHHHH
Q psy11989 236 VFFVTATWSVFAYIWLYAILAVFSPGIVEVWEGLLTFLFFPATVLTA 282 (342)
Q Consensus 236 v~rD~~~~~l~~yi~llll~~v~~~g~It~~EgllLLllY~~YV~~~ 282 (342)
..|+ ...++.+++.-.+..||+=++.+|..++++|++-..-.
T Consensus 392 -~~et----~~l~isVfl~~y~lqdG~Sny~kG~mLll~Y~Iia~~F 433 (441)
T KOG1397|consen 392 -LLET----ACLFISVFLVAYLLQDGKSNYFKGLMLLLCYLIIAAGF 433 (441)
T ss_pred -HHHH----HHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHh
Confidence 0121 11223344556667899999999999999998866543
No 26
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=97.76 E-value=0.00021 Score=71.76 Aligned_cols=125 Identities=16% Similarity=0.194 Sum_probs=90.7
Q ss_pred ceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhh---he
Q psy11989 145 NASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALC---VA 221 (342)
Q Consensus 145 ~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~---~L 221 (342)
|.++..-+...+.+|. |+...|+++.++=--+||-.+++.+++ +++=|.+++-..||++--.++.+-+. ++
T Consensus 238 e~lv~~le~~l~~~g~---~~~F~G~iIa~lVgn~~E~~tAi~aA~---~~~mqls~nia~Gsalq~~lltiP~lvlis~ 311 (368)
T COG0387 238 EILVGSLEAVLESLGA---PPAFVGLIIAALVGNAPEHLTALRAAL---NNRMQLSMNIAMGSALQTALLTIPVLVLISL 311 (368)
T ss_pred HHHHHHHHHHHHhcCC---CHHHHHHHHHHHhccCHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444455677788998 999999999999988999999999998 77888888888999888777665542 33
Q ss_pred eccCCceeeecceeEEEehhhHHHHHHH-HHHHHHHHhcCCeehhHHHHHHHHHHHHHHHHHHh
Q psy11989 222 VIPNGEVRKIKHLRVFFVTATWSVFAYI-WLYAILAVFSPGIVEVWEGLLTFLFFPATVLTAYF 284 (342)
Q Consensus 222 i~p~~~~~~I~~~~v~rD~~~~~l~~yi-~llll~~v~~~g~It~~EgllLLllY~~YV~~~~~ 284 (342)
+. +++..+.-. .|-+.... .+++.-..+.||+-+|.||..++..|+.|+...++
T Consensus 312 ~~--gqpm~l~~~-------~~elV~l~~~v~~~~~~~sdG~sn~leG~~lL~lya~~~~~ff~ 366 (368)
T COG0387 312 FT--GQPLTLGFG-------PPELVLLVVTVFLANILFSDGRTNWLEGVVLLALYAIYAMLFFF 366 (368)
T ss_pred Hh--CCCccccCC-------HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHhc
Confidence 32 233332211 12222222 23445566789999999999999999999987653
No 27
>PF01699 Na_Ca_ex: Sodium/calcium exchanger protein; InterPro: IPR004837 The sodium/calcium exchangers are a family of integral membrane proteins. This domain covers the integral membrane regions of these proteins. Sodium/calcium exchangers regulate intracellular Ca2+ concentrations in many cells; cardiac myocytes, epithelial cells, neurons retinal rod photoreceptors and smooth muscle cells []. Ca2+ is moved into or out of the cytosol depending on Na+ concentration []. In humans and rats there are 3 isoforms; NCX1 NCX2 and NCX3 []. ; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 3V5U_A 3V5S_A.
Probab=96.72 E-value=0.0023 Score=53.51 Aligned_cols=51 Identities=22% Similarity=0.376 Sum_probs=43.0
Q ss_pred HHHHHHhhhhhhHHHHhccceeeEEecCCCccceeeeeeehhhhhhHHHHhhcCchhHHHHHHHHHhcC
Q psy11989 67 GVSIISDRFMSAIEVITSQEREVSVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGK 135 (342)
Q Consensus 67 ~l~iv~d~F~~sl~~I~~~~~~~~~~~~~g~~~~~~~~~~~~~VagLtlma~g~s~PEl~~s~I~~~~~ 135 (342)
.+...++.+.+++|.++++. .+++.+.|++++++++|+||+++++.....+
T Consensus 2 ~i~~~a~~l~~~~~~i~~~~------------------~i~~~~~g~~lla~~~slpe~~~~~~~~~~g 52 (140)
T PF01699_consen 2 LIIVAAEFLVESVEIIAERL------------------GISESFLGLTLLALATSLPELIVAISAARKG 52 (140)
T ss_dssp HHHHHHHHHHHHHHHHHCCC------------------TB-HCCHHHCCHHCCCCHHHHHHHHHHHCTT
T ss_pred EehHHHHHHHHHHHHHHHHh------------------CCCHHHHHHHHHHHHcCHHHHHHHHHHhhcc
Confidence 45677788999999999973 3789999999999999999999999965553
No 28
>KOG1397|consensus
Probab=95.69 E-value=0.072 Score=54.42 Aligned_cols=117 Identities=13% Similarity=0.070 Sum_probs=73.9
Q ss_pred hhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCceeeecceeEEEehhhHH--
Q psy11989 167 VANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEVRKIKHLRVFFVTATWS-- 244 (342)
Q Consensus 167 VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~~~I~~~~v~rD~~~~~-- 244 (342)
-.|..+-|.=..+=|++.+++|.. +++..+-=|..+||-.-|+++++|+|..... -.+|-++ +-+..+...
T Consensus 127 tvGgllNAtfGnaiElii~ilALk---~g~~riVq~SlLGSILsnlLLvlG~s~~~Gg--i~rk~Q~--Fn~~~A~v~s~ 199 (441)
T KOG1397|consen 127 TVGGLLNATFGNAIELIIYILALK---NGKVRIVQGSLLGSILSNLLLVLGLSLFCGG--IRRKDQR--FNIKSAGVNSA 199 (441)
T ss_pred cHHHHHhhhhccHHHHHHHHHHhh---cCceEEEehhhHHHHHHHHHHHhhHHHhhcc--cccceee--cccchhhHHHH
Confidence 346667777777889999999875 7777888899999999999999999876632 2222111 111111111
Q ss_pred HHHHHHH-HHHHH---HhcC------------CeehhHHHHHHHHHHHHHHHHHHhccccch
Q psy11989 245 VFAYIWL-YAILA---VFSP------------GIVEVWEGLLTFLFFPATVLTAYFADKKLA 290 (342)
Q Consensus 245 l~~yi~l-lll~~---v~~~------------g~It~~EgllLLllY~~YV~~~~~~d~~l~ 290 (342)
++.+..+ .++-. ..++ -.++|.-++++++.|++|+++-.+..|+.+
T Consensus 200 lLl~a~l~~l~P~~l~~~~~~~~~~~~~~~~~l~lSr~~SivmliaYi~~L~FqL~t~~h~~ 261 (441)
T KOG1397|consen 200 LLLLAVLGILLPTVLHYTYGGEVHDCSSGGAILPLSRGCSIVMLIAYIAYLWFQLKTARHIW 261 (441)
T ss_pred HHHHHHHHHHHHHHHHHhcCccccccCCccceeeehhccHHHHHHHHHHHHHHhhhcccccC
Confidence 1111111 11111 1111 136899999999999999988876644333
No 29
>COG0387 ChaA Ca2+/H+ antiporter [Inorganic ion transport and metabolism]
Probab=92.25 E-value=0.19 Score=50.97 Aligned_cols=70 Identities=20% Similarity=0.160 Sum_probs=56.9
Q ss_pred ceeeeccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheec
Q psy11989 145 NASVTNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVI 223 (342)
Q Consensus 145 ~~lV~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~ 223 (342)
.++++.++++|.+.|= =.|.-+.|+--.+=|++..+++-. .|+..+.=+++.||-+-|++++.|+|.+..
T Consensus 51 ~~v~~aaE~lA~~vG~------~~G~Lina~f~~~iEvil~~~al~---~G~~~lvr~Si~gsIm~~~llv~GlslllG 120 (368)
T COG0387 51 FSVVRAAEVLAARVGE------PYGSLINALFGNAIEVILIVAALK---SGSPTLVRDSLYGSIMINLLLVVGLSLLLG 120 (368)
T ss_pred HHHHHHHHHHHHHhCC------chhHHHHHHHHHHHHHHHHHHHHh---CCCchhhHHHHHHHHHHHHHHHHHHHHHHc
Confidence 4566788999999873 246667777777789998777665 667888999999999999999999999884
No 30
>PF08370 PDR_assoc: Plant PDR ABC transporter associated; InterPro: IPR013581 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems. ABC transporters minimally consist of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain []. The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyse ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarise the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site [, , ]. The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis [, , , , , ]. The ATP-Binding Cassette (ABC) superfamily forms one of the largest of all protein families with a diversity of physiological functions []. Several studies have shown that there is a correlation between the functional characterisation and the phylogenetic classification of the ABC cassette [, ]. More than 50 subfamilies have been described based on a phylogenetic and functional classification [, , ]; (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). This domain is found on the C terminus of ABC-2 type transporter domains (IPR013525 from INTERPRO). It seems to be associated with the plant pleiotropic drug resistance (PDR) protein family of ABC transporters. Like in yeast, plant PDR ABC transporters may also play a role in the transport of antifungal agents [] (see also IPR010929 from INTERPRO). The PDR family is characterised by a configuration in which the ABC domain is nearer the N terminus of the protein than the transmembrane domain [].
Probab=46.06 E-value=18 Score=28.20 Aligned_cols=24 Identities=25% Similarity=0.537 Sum_probs=21.9
Q ss_pred ccchhhhhhh-HHHHHHHHHhhhee
Q psy11989 199 LGPGTIVGSA-AYNLFVIIALCVAV 222 (342)
Q Consensus 199 IgvGnIVGSn-IFNillIlGv~~Li 222 (342)
||+|.++|.. +||++.+++++.+-
T Consensus 31 IgvgaL~G~~vlFNil~~laL~yL~ 55 (65)
T PF08370_consen 31 IGVGALLGFIVLFNILFTLALTYLN 55 (65)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHhcC
Confidence 8999999986 78999999999875
No 31
>COG1953 FUI1 Cytosine/uracil/thiamine/allantoin permeases [Nucleotide transport and metabolism / Coenzyme metabolism]
Probab=37.34 E-value=2.6e+02 Score=30.01 Aligned_cols=165 Identities=21% Similarity=0.326 Sum_probs=98.0
Q ss_pred EecCCCccceeeeeeehh----------------hhhhHHHHhhcCchhHHHHHHHHHhcCcc------ccCCCCcceee
Q psy11989 91 VTNKAGTRHKVTVRVWNE----------------TVANLTLMALGSSAPEILLSVIEIWGKGF------SAGELGPNASV 148 (342)
Q Consensus 91 ~~~~~g~~~~~~~~~~~~----------------~VagLtlma~g~s~PEl~~s~I~~~~~~~------~~~d~Ga~~lV 148 (342)
..|+|=.|.+...|.|.+ -..+.+++.+|-|-+|...+++ .|..+ ..|-.|.++=|
T Consensus 26 lyN~DL~P~~~~~rtWg~~~~~~~W~~~~~nv~~~~~aa~~~~lGLS~~qallai~--vG~~iv~i~m~Lng~~G~~~gI 103 (497)
T COG1953 26 LYNEDLAPTPAEQRTWGWWNYFALWLGMVHNVPTYMLAAGLFELGLSPWQALLAIL--VGNLIVAIFMVLNGHAGSKYGI 103 (497)
T ss_pred ccCCCCCCCccccCcchHHHHHHHHHHhhccHHHHHHHHHHHHhcCCHHHHHHHHH--HHHHHHHHHHHhccCcccccCC
Confidence 457777777777777766 2345667789999999988876 22221 34566777777
Q ss_pred eccccccccccccccCcchhhhhhhhhcCChhHHHHHHHHHHhcCCCCCCccchhhhhhhHHHHHHHHHhhheeccCCce
Q psy11989 149 TNKAGTRHKVTVRVWNETVANLTLMALGSSAPEILLSVIEIWGKGFSAGELGPGTIVGSAAYNLFVIIALCVAVIPNGEV 228 (342)
Q Consensus 149 ~~a~~iA~~lgV~vlSe~VaGaT~vA~GTSaPEL~tSIiAa~~~~~g~~dIgvGnIVGSnIFNillIlGv~~Li~p~~~~ 228 (342)
.=++.....||+ .|+-.|=+.=.++|.. =-|+=+-+||...|+++-.=-.....|.+..
T Consensus 104 pFpv~~RaSFGi--------------~Ga~~p~l~R~i~A~~-------WyGvqty~Gg~av~llL~~i~~~~~~~~~~~ 162 (497)
T COG1953 104 PFPVLSRASFGI--------------YGANFPALIRAIVAIV-------WYGVQTYAGGLAVNLLLGSIFPSLLIPNTLS 162 (497)
T ss_pred CchHHHHHHHhh--------------hhhhHHHHHHHHHHHH-------HHHHHHHHhHHHHHHHHHHhccccccCCccc
Confidence 777777788888 8999999988888764 2356677899888887644333333332211
Q ss_pred eeecceeEEEehhhHHHHHHHHHHHHHHHh-cCCeehh---HHHHHHHHHHHHHHHHHH
Q psy11989 229 RKIKHLRVFFVTATWSVFAYIWLYAILAVF-SPGIVEV---WEGLLTFLFFPATVLTAY 283 (342)
Q Consensus 229 ~~I~~~~v~rD~~~~~l~~yi~llll~~v~-~~g~It~---~EgllLLllY~~YV~~~~ 283 (342)
..+ ..+ +..+..++..|.+-+.++. -..+|.+ |.|.+........+.++.
T Consensus 163 ~~l-g~t----t~~~i~F~ifW~l~~l~~~~g~~~Ir~~~~~a~p~~~~~~~gl~Iw~~ 216 (497)
T COG1953 163 PLL-GLT----TLELICFFIFWVLQLLVLFKGMESIRKFETWAGPLVYIAMLGLAIWAL 216 (497)
T ss_pred ccc-CCc----HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 111 111 1134455545544333332 2334544 445555555555555544
Done!