BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12005
(188 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56198|CIDEC_MOUSE Cell death activator CIDE-3 OS=Mus musculus GN=Cidec PE=1 SV=2
Length = 239
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRAR--LKLGMSSVVKVVLDLDGTEVDEEEYFSTLE 71
PC+V ++R+ + GI+A SL+DL+N+ + LKL +VL+ DGT V+ EEYF L
Sbjct: 44 PCRVSTADRKVRKGIMAHSLEDLLNKVQDILKLK-DKPFSLVLEEDGTIVETEEYFQALA 102
Query: 72 KNTSLMILSKNDKWTPRSET---TATLTLERNETNN-DVTGFLTKIHGNNGVSILGGLEL 127
K+T M+L K KW P SE A L L + T DV ++ N +G L +
Sbjct: 103 KDTMFMVLLKGQKWKPPSEQRKKRAQLALSQKPTKKIDVARVTFDLYKLNPQDFIGCLNV 162
Query: 128 E 128
+
Sbjct: 163 K 163
>sp|O70303|CIDEB_MOUSE Cell death activator CIDE-B OS=Mus musculus GN=Cideb PE=1 SV=2
Length = 219
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMSSVVKVVLDLDGTEVDEEEYFSTLEKN 73
P +V D R + G+ A SL++L+++ L + V+ +VL+ DGT VD E++F LE +
Sbjct: 37 PFRVCDHKRTVRKGLTAASLQELLDKVLETLLLRGVLTLVLEEDGTAVDSEDFFQLLEDD 96
Query: 74 TSLMILSKNDKWTPRSET-TATLTLERNETNNDVTGFLTKIHGNNGVSILGGLELE 128
T LM+L + W+P+S + L E+ + + D+ ++ N + G L ++
Sbjct: 97 TCLMVLEQGQSWSPKSGMLSYGLGREKPKHSKDIARITFDVYKQNPRDLFGSLNVK 152
>sp|Q9UHD4|CIDEB_HUMAN Cell death activator CIDE-B OS=Homo sapiens GN=CIDEB PE=1 SV=2
Length = 219
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMSSVVKVVLDLDGTEVDEEEYFSTLEKN 73
P +V D R + G+ A + ++L+ +A L ++ V+ +VL+ DGT VD E++F LE +
Sbjct: 37 PFRVCDHKRTIRKGLTAATRQELLAKALETLLLNGVLTLVLEEDGTAVDSEDFFQLLEDD 96
Query: 74 TSLMILSKNDKWTPRSETTATLTL--ERNETNNDVTGFLTKIHGNNGVSILGGLELE 128
T LM+L W+P + L ER + + D+ F ++ N + G L ++
Sbjct: 97 TCLMVLQSGQSWSPTRSGVLSYGLGRERPKHSKDIARFTFDVYKQNPRDLFGSLNVK 153
>sp|Q96AQ7|CIDEC_HUMAN Cell death activator CIDE-3 OS=Homo sapiens GN=CIDEC PE=1 SV=1
Length = 238
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMS-SVVKVVLDLDGTEVDEEEYFSTLEK 72
PC+V ++R + GI+A SL+DL+ + R L ++ +VL+ DGT V+ EEYF L
Sbjct: 44 PCRVSTADRSVRKGIMAYSLEDLLLKVRDTLMLADKPFFLVLEEDGTTVETEEYFQALAG 103
Query: 73 NTSLMILSKNDKWTPRSE 90
+T M+L K KW P SE
Sbjct: 104 DTVFMVLQKGQKWQPPSE 121
>sp|F1MN90|CIDEC_BOVIN Cell death activator CIDE-3 OS=Bos taurus GN=CIDEC PE=2 SV=1
Length = 222
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 3/118 (2%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMS-SVVKVVLDLDGTEVDEEEYFSTLEK 72
PC+V ++R + GI+ SL+DL + R L ++ +VL+ DGT V+ EEYF +L
Sbjct: 29 PCRVTTADRSVRKGIMVHSLEDLHVKVRDTLMLAYKPFFLVLEEDGTTVETEEYFQSLAD 88
Query: 73 NTSLMILSKNDKWTPRSE--TTATLTLERNETNNDVTGFLTKIHGNNGVSILGGLELE 128
+T M+L K KW P SE T L L DV ++ N +G L ++
Sbjct: 89 DTVFMVLHKGQKWQPPSEQSTRYQLALSHKPAKIDVARVTFDLYKVNPQDFIGCLNVK 146
>sp|O60543|CIDEA_HUMAN Cell death activator CIDE-A OS=Homo sapiens GN=CIDEA PE=1 SV=1
Length = 219
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMSS-VVKVVLDLDGTEVDEEEYFSTLEK 72
P +V + +R + G++A SL++L+++ L +++ +V +VL+ DGT VD EE+F TL
Sbjct: 36 PFRVSNHDRSSRRGVMASSLQELISKTLDALVIATGLVTLVLEEDGTVVDTEEFFQTLGD 95
Query: 73 NTSLMILSKNDKWTPRSETTATLTLERNETNNDVTGFLTKIHGNNGVSIL 122
NT MIL K KW P S+ T + + VT L +++ + + L
Sbjct: 96 NTHFMILEKGQKWMPGSQHVPTCSPPKRSGIARVTFDLYRLNPKDFIGCL 145
>sp|Q5XI33|CIDEC_RAT Cell death activator CIDE-3 OS=Rattus norvegicus GN=Cidec PE=2 SV=1
Length = 238
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 7/121 (5%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRAR--LKLGMSSVVKVVLDLDGTEVDEEEYFSTLE 71
PC+V ++R+ + GI+A SL+DL+ + + LKL +VL+ DGT V+ EEYF L
Sbjct: 44 PCRVSTADRKVRKGIMAHSLEDLLGKVQDILKLK-DKPFSLVLEEDGTIVETEEYFQALP 102
Query: 72 KNTSLMILSKNDKWTPRSET---TATLTLERNETNN-DVTGFLTKIHGNNGVSILGGLEL 127
++T M+L K KW SE A L+L + T DV ++ N +G L +
Sbjct: 103 RDTVFMVLQKGQKWKSPSEQRKKKAQLSLSQKPTKKIDVARVTFDLYKLNPQDFIGCLNV 162
Query: 128 E 128
+
Sbjct: 163 K 163
>sp|O70302|CIDEA_MOUSE Cell death activator CIDE-A OS=Mus musculus GN=Cidea PE=1 SV=2
Length = 217
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMSS-VVKVVLDLDGTEVDEEEYFSTLEK 72
P +V + +R + G++A SL++L+++ L +++ +V +VL+ DGT VD EE+F TL
Sbjct: 36 PFRVSNHDRSSRRGVMASSLQELISKTLDVLVITTGLVTLVLEEDGTVVDTEEFFQTLRD 95
Query: 73 NTSLMILSKNDKWTPRSE 90
NT MIL K KWTP S+
Sbjct: 96 NTHFMILEKGQKWTPGSK 113
>sp|Q3T191|CIDEB_BOVIN Cell death activator CIDE-B OS=Bos taurus GN=CIDEB PE=2 SV=1
Length = 219
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMSSVVKVVLDLDGTEVDEEEYFSTLEKN 73
P +V D+ R + G+ A + ++L+++A L +S + +VL+ DGT V+ EE+F LE +
Sbjct: 37 PFRVCDNKRTTRKGLTAATRQELLDKALEALVLSGALTLVLEEDGTTVESEEFFQLLEDD 96
Query: 74 TSLMILSKNDKWTPRSETTATLTL--ERNETNNDVTGFLTKIHGNNGVSILGGLELE 128
T LM+L W+PR + L E+ + + D+ ++ + + G L ++
Sbjct: 97 TCLMVLELGQSWSPRRSGVLSYGLGQEKPKHSKDIARITFDVYKQSPRDLFGSLNIK 153
>sp|O00273|DFFA_HUMAN DNA fragmentation factor subunit alpha OS=Homo sapiens GN=DFFA
PE=1 SV=1
Length = 331
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMS---SVVKVVLDLDGTEVDEEEYFSTL 70
PC + + ++ G+ A L+DL ++A L + + V +VL DGT VD+++YF L
Sbjct: 20 PCLLRRNYSREQHGVAASCLEDLRSKACDILAIDKSLTPVTLVLAEDGTIVDDDDYFLCL 79
Query: 71 EKNTSLMILSKNDKWT 86
NT + L+ N+KW
Sbjct: 80 PSNTKFVALASNEKWA 95
>sp|O54786|DFFA_MOUSE DNA fragmentation factor subunit alpha OS=Mus musculus GN=Dffa
PE=1 SV=2
Length = 331
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 14 PCKVVDSNREKKIGIVALSLKDLMNRARLKLGMS---SVVKVVLDLDGTEVDEEEYFSTL 70
PC + ++ + G+ A SL++L ++A L + + + +VL DGT VD+++YF L
Sbjct: 20 PCLLRRNHSRDQHGVAASSLEELRSKACELLAIDKSLTPITLVLAEDGTIVDDDDYFLCL 79
Query: 71 EKNTSLMILSKNDKW 85
NT + L+ N+KW
Sbjct: 80 PSNTKFVALACNEKW 94
>sp|P02855|VCLA_PEA Provicilin (Fragment) OS=Pisum sativum PE=3 SV=1
Length = 275
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 99 RNETNNDVTGFLTKIHGNNGVSILGGLELELLSDMD--------PESLTDIIPDKLFLDQ 150
R +N ++ GF NN + L G E ++S + P S ++ D+L +Q
Sbjct: 188 RASSNLNLLGFGINAE-NNQRNFLAGEEDNVISQIQKQVKDLTFPGSAQEV--DRLLENQ 244
Query: 151 FKEVSSRYFSNKNHHSKETKSEKILHHRYVILFA 184
YF+N +ET+S++I H Y IL A
Sbjct: 245 ----KQSYFANAQPQQRETRSQEIKEHLYSILGA 274
>sp|Q9UPS8|ANR26_HUMAN Ankyrin repeat domain-containing protein 26 OS=Homo sapiens
GN=ANKRD26 PE=1 SV=3
Length = 1709
Score = 30.8 bits (68), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 101 ETNNDVTGFLTKIHGNNG---VSILG-GLELELLSDMDPESLTDIIPDK 145
+TNND ++ ++H NN +S LG G E ++ S D ES+++ P K
Sbjct: 384 QTNNDNLTYVDEVHKNNRSDMMSALGLGQEEDIESPWDSESISENFPQK 432
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.134 0.370
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,560,534
Number of Sequences: 539616
Number of extensions: 2713980
Number of successful extensions: 6229
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6207
Number of HSP's gapped (non-prelim): 29
length of query: 188
length of database: 191,569,459
effective HSP length: 111
effective length of query: 77
effective length of database: 131,672,083
effective search space: 10138750391
effective search space used: 10138750391
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)