RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1202
(136 letters)
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 81.7 bits (200), Expect = 8e-20
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNCKLMEEK-GMGLITPHETITGD 63
H F+TH G +S E+V GVP++ P F DQ N +++E+ +G+ T
Sbjct: 335 HEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEGGVFTKS 394
Query: 64 ILYITIREVLNNPRY---RDTVGRLSKQVR---SLPYSNLDQAVRWAEHVAANKGV 113
L ++L+ + R+ + L + S+ + + + V+ K V
Sbjct: 395 GLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPKDV 450
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 401
Score = 76.3 bits (186), Expect = 6e-18
Identities = 21/91 (23%), Positives = 34/91 (37%), Gaps = 1/91 (1%)
Query: 1 MPTGHRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNCKLMEEKGMGLITPHETI 60
R I HG + A GVP +++P +DQ + G+G+ T
Sbjct: 296 FQALFRRVAAVIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHDGPTP 355
Query: 61 TGDILYITIREVLNNPRYRDTVGRLSKQVRS 91
T + L + VL P R ++ V +
Sbjct: 356 TFESLSAALTTVL-APETRARAEAVAGMVLT 385
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis
orientalis [TaxId: 31958]}
Length = 401
Score = 75.1 bits (183), Expect = 2e-17
Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 3/108 (2%)
Query: 1 MPTGHRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNCKLMEEKGMGLITPHETI 60
I HGG ++ A G P +++P +DQ + E G+G+
Sbjct: 295 HQVLFGRVAAVIHHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIP 354
Query: 61 TGDILYITIREVLNNPRYRDTVGRLSKQVRSLPYSNLDQAVRWAEHVA 108
T D L + L P ++ +R+ + A + V+
Sbjct: 355 TFDSLSAALATAL-TPETHARATAVAGTIRTDGAA--VAARLLLDAVS 399
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 70.2 bits (170), Expect = 1e-15
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNCKLM-EEKGMGLITPHETITGD 63
H + F+TH G +S+ E++ GVP++ P F+DQ +C+ + E +G + + +
Sbjct: 362 HPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIG-MEIDTNVKRE 420
Query: 64 ILYITIREVLNNPR---YRDTVGRLSKQVR 90
L I EV+ + + L K+
Sbjct: 421 ELAKLINEVIAGDKGKKMKQKAMELKKKAE 450
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 68.6 bits (166), Expect = 4e-15
Identities = 18/94 (19%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNCKLM-EEKGMGLITP------H 57
H+ F++H G +S +E+++ GVP++ P +++Q N + +E G+GL
Sbjct: 346 HKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGS 405
Query: 58 ETITGDILYITIREVLNNPR-YRDTVGRLSKQVR 90
+ + + + ++++++ V + + R
Sbjct: 406 DVVAAEEIEKGLKDLMDKDSIVHKKVQEMKEMSR 439
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 64.4 bits (155), Expect = 1e-13
Identities = 18/93 (19%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNCKLMEEK-GMGL---ITPHETI 60
H + F+TH G +S++E+V G+P++ P +++Q N L+ E L +
Sbjct: 350 HPSTGGFLTHCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLV 409
Query: 61 TGDILYITIREVLNNPR---YRDTVGRLSKQVR 90
+ + ++ ++ R+ + L +
Sbjct: 410 RREEVARVVKGLMEGEEGKGVRNKMKELKEAAC 442
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA
{Amycolatopsis orientalis [TaxId: 31958]}
Length = 391
Score = 64.3 bits (155), Expect = 1e-13
Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 1 MPTGHRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSD----QHQNCKLMEEKGMGLITP 56
+ I H +++ A+ G+P +++ D Q + + E G+G+
Sbjct: 280 LQELFGRVAAAIHHDSAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVD 339
Query: 57 HETITGDILYITIREVLNNPRYRDTVGRLSKQVRSLPYSNLDQAVRWAEHVAANK 111
T D L + L P R ++ +R+ + Q + + V+ K
Sbjct: 340 GPVPTIDSLSAALDTAL-APEIRARATTVADTIRADGTTVAAQLL--FDAVSLEK 391
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis
glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Length = 351
Score = 40.9 bits (94), Expect = 1e-05
Identities = 12/78 (15%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMP---GFSDQHQNCKLMEEKGMGLITPHETIT 61
+ + + G + E G+P + +P Q+ N +E+ G I ++
Sbjct: 246 YAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLS 305
Query: 62 GDILYITIREVLNNPRYR 79
D + T+
Sbjct: 306 VDAVANTLAGWSRETLLT 323
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium
tumefaciens [TaxId: 358]}
Length = 477
Score = 26.9 bits (58), Expect = 0.97
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 7/80 (8%)
Query: 21 MEAVYHGVPVVM--MPGFSD---QHQNCKLMEEKGMGLITPHETITGDILYITIREVLNN 75
+ A+ +G V+ G +D + L + G+ T+ G L IR +
Sbjct: 383 LYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDG--LKQAIRRTVRY 440
Query: 76 PRYRDTVGRLSKQVRSLPYS 95
++ K S
Sbjct: 441 YHDPKLWTQMQKLGMKSDVS 460
>d3d03a1 d.159.1.11 (A:1-271) Glycerophosphodiesterase GpdQ
{Enterobacter aerogenes [TaxId: 548]}
Length = 271
Score = 26.2 bits (56), Expect = 1.4
Identities = 9/39 (23%), Positives = 11/39 (28%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQNC 43
I G HS Y + +PG Q C
Sbjct: 184 RFPSLTRIFCGHNHSLTMTQYRQALISTLPGTVHQVPYC 222
>d2hy1a1 d.159.1.11 (A:10-265) Rv0805 cyclic nucleotide
phosphodiesterase {Mycobacterium tuberculosis [TaxId:
1773]}
Length = 256
Score = 24.4 bits (51), Expect = 5.3
Identities = 8/37 (21%), Positives = 12/37 (32%)
Query: 5 HRNCKLFITHGGIHSSMEAVYHGVPVVMMPGFSDQHQ 41
I G +H S A + G+PV +
Sbjct: 187 RGTDVRAILAGHLHYSTNATFVGIPVSVASATCYTQD 223
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.136 0.412
Gapped
Lambda K H
0.267 0.0399 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 512,738
Number of extensions: 21649
Number of successful extensions: 66
Number of sequences better than 10.0: 1
Number of HSP's gapped: 63
Number of HSP's successfully gapped: 13
Length of query: 136
Length of database: 2,407,596
Length adjustment: 76
Effective length of query: 60
Effective length of database: 1,364,116
Effective search space: 81846960
Effective search space used: 81846960
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)