Your job contains 1 sequence.
>psy12044
MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN
LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP
DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN
NKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS
VTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESM
SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEEN
VEVVTVFPLEYVLIVSGIISVCSLVLIFLLVLCFLCFRRKKKKLKKKDESDKNVNGSNEN
VVKNLRESPKYTSVNATSATCMDKVNGGYIIADGHNDMMLYATDSGILVATNNMNTYPSY
SISYQIEQNPDLVNDAESVDKDRRAQGGEDTQDTQDKASEAASVQYSDSGSQCQEWGNVC
YNRMQPMQHIVLNNVYNQPADIHLTPEKFMDRDGYPVDFGLPKVPTHFPALVPATAYYRT
LPHRRHTAANPNNRYSREAEFLSRSSQPASYEHYAPADVRYNIEGYPSASPTPYSSAPRV
TFTEPLHILQGQPMQSNPPTETTTKNEQTWTESSADEQPSTSNPEKSNENKSEGFQAKRH
MIDSLLKNRDVKVGSHLHPHRGLMLPPVLTESPDEGYEGEGPETTEM
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12044
(767 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0015400 - symbol:kek2 "kekkon-2" species:7227 "Dro... 1040 1.6e-113 2
FB|FBgn0015399 - symbol:kek1 "kekkon-1" species:7227 "Dro... 764 1.1e-82 3
FB|FBgn0028370 - symbol:kek3 "kekkon-3" species:7227 "Dro... 641 3.3e-64 2
FB|FBgn0039862 - symbol:kek6 "kek6" species:7227 "Drosoph... 440 1.2e-38 1
FB|FBgn0031016 - symbol:kek5 "kekkon5" species:7227 "Dros... 413 1.9e-35 1
FB|FBgn0032484 - symbol:kek4 "kekkon4" species:7227 "Dros... 404 5.1e-35 1
ZFIN|ZDB-GENE-060503-496 - symbol:lrrc24 "leucine rich re... 348 8.0e-29 1
UNIPROTKB|Q50LG9 - symbol:LRRC24 "Leucine-rich repeat-con... 320 5.6e-26 1
MGI|MGI:3605040 - symbol:Lrrc24 "leucine rich repeat cont... 315 2.3e-25 1
UNIPROTKB|F1P2C4 - symbol:LRRC4C "Uncharacterized protein... 301 1.1e-24 1
UNIPROTKB|F1NTY3 - symbol:LRRC4C "Uncharacterized protein... 301 1.1e-23 1
UNIPROTKB|F1PSS7 - symbol:SLIT1 "Uncharacterized protein"... 314 1.5e-23 2
UNIPROTKB|E1C7Z9 - symbol:E1C7Z9 "Uncharacterized protein... 310 3.6e-23 2
UNIPROTKB|F1SHH6 - symbol:LRRC4C "Uncharacterized protein... 297 5.2e-23 1
UNIPROTKB|E2REC5 - symbol:LRRC4C "Uncharacterized protein... 296 6.6e-23 1
UNIPROTKB|F1MXH5 - symbol:LRRC4C "Uncharacterized protein... 296 6.6e-23 1
UNIPROTKB|Q9HCJ2 - symbol:LRRC4C "Leucine-rich repeat-con... 296 6.6e-23 1
MGI|MGI:2442636 - symbol:Lrrc4c "leucine rich repeat cont... 296 6.6e-23 1
RGD|1311013 - symbol:Lrrc4c "leucine rich repeat containi... 296 6.6e-23 1
UNIPROTKB|Q5T0V0 - symbol:SLIT1 "Slit homolog 1 protein" ... 309 9.4e-23 2
UNIPROTKB|O75093 - symbol:SLIT1 "Slit homolog 1 protein" ... 309 1.1e-22 2
RGD|69307 - symbol:Slit1 "slit homolog 1 (Drosophila)" sp... 309 1.4e-22 2
UNIPROTKB|O88279 - symbol:Slit1 "Slit homolog 1 protein" ... 309 1.4e-22 2
MGI|MGI:1315203 - symbol:Slit1 "slit homolog 1 (Drosophil... 305 3.7e-22 2
ZFIN|ZDB-GENE-010306-4 - symbol:slit3 "slit (Drosophila) ... 293 6.6e-22 1
RGD|69311 - symbol:Slit3 "slit homolog 3 (Drosophila)" sp... 289 1.8e-21 1
UNIPROTKB|O88280 - symbol:Slit3 "Slit homolog 3 protein" ... 289 1.8e-21 1
UNIPROTKB|O75094 - symbol:SLIT3 "Slit homolog 3 protein" ... 289 1.8e-21 1
UNIPROTKB|J3KNP3 - symbol:SLIT3 "Slit homolog 3 protein" ... 289 1.8e-21 1
UNIPROTKB|E1B8X9 - symbol:SLITRK5 "Uncharacterized protei... 277 1.6e-20 1
ZFIN|ZDB-GENE-080327-5 - symbol:sc:d0316 "sc:d0316" speci... 276 1.7e-20 2
ZFIN|ZDB-GENE-030722-4 - symbol:slit1b "slit homolog 1b (... 281 2.9e-20 2
RGD|1310957 - symbol:Slitrk5 "SLIT and NTRK-like family, ... 275 3.0e-20 1
UNIPROTKB|E2QXQ1 - symbol:SLITRK5 "Uncharacterized protei... 273 5.0e-20 1
ZFIN|ZDB-GENE-030722-3 - symbol:slit1a "slit homolog 1a (... 284 5.7e-20 2
ZFIN|ZDB-GENE-050522-160 - symbol:lrit2 "leucine-rich rep... 268 5.8e-20 1
MGI|MGI:2679448 - symbol:Slitrk5 "SLIT and NTRK-like fami... 272 6.4e-20 1
UNIPROTKB|O94991 - symbol:SLITRK5 "SLIT and NTRK-like pro... 272 6.4e-20 1
MGI|MGI:1315202 - symbol:Slit3 "slit homolog 3 (Drosophil... 288 6.9e-20 2
RGD|735030 - symbol:Igsf10 "immunoglobulin superfamily, m... 215 9.1e-20 2
UNIPROTKB|F1NRZ3 - symbol:RTN4R "Uncharacterized protein"... 258 9.9e-20 2
UNIPROTKB|F1RP61 - symbol:SLITRK5 "Uncharacterized protei... 270 1.1e-19 1
ZFIN|ZDB-GENE-050522-533 - symbol:lrrc4c "leucine rich re... 275 1.4e-19 2
UNIPROTKB|Q27972 - symbol:CHAD "Chondroadherin" species:9... 253 2.2e-19 1
MGI|MGI:1096866 - symbol:Chad "chondroadherin" species:10... 252 2.5e-19 1
RGD|69310 - symbol:Slit2 "slit homolog 2 (Drosophila)" sp... 265 2.5e-19 1
UNIPROTKB|A6NDA9 - symbol:LRIT2 "Leucine-rich repeat, imm... 261 3.3e-19 1
ZFIN|ZDB-GENE-010306-3 - symbol:slit2 "slit (Drosophila) ... 276 3.3e-19 2
UNIPROTKB|I3LDA4 - symbol:PXDN "Uncharacterized protein" ... 267 4.2e-19 1
RGD|2336 - symbol:Chad "chondroadherin" species:10116 "Ra... 249 6.5e-19 1
UNIPROTKB|O15335 - symbol:CHAD "Chondroadherin" species:9... 248 9.1e-19 1
MGI|MGI:3027390 - symbol:Lrrc4b "leucine rich repeat cont... 258 1.3e-18 1
RGD|1307121 - symbol:Lrrc4b "leucine rich repeat containi... 258 1.3e-18 1
UNIPROTKB|E1BPK8 - symbol:LRRC4B "Uncharacterized protein... 258 1.3e-18 1
UNIPROTKB|Q9NT99 - symbol:LRRC4B "Leucine-rich repeat-con... 258 1.3e-18 1
UNIPROTKB|F1PZW2 - symbol:LRRC4B "Uncharacterized protein... 258 1.3e-18 1
UNIPROTKB|I3LJI7 - symbol:LRRC4B "Uncharacterized protein... 258 1.3e-18 1
MGI|MGI:2442845 - symbol:Lrrc38 "leucine rich repeat cont... 234 1.3e-18 1
ZFIN|ZDB-GENE-091116-44 - symbol:lrrc4bb "leucine rich re... 258 1.4e-18 1
MGI|MGI:2653612 - symbol:Amigo1 "adhesion molecule with I... 254 1.4e-18 1
MGI|MGI:2444885 - symbol:Lrit2 "leucine-rich repeat, immu... 255 1.5e-18 1
RGD|727797 - symbol:Rtn4rl2 "reticulon 4 receptor-like 2"... 251 1.6e-18 1
ZFIN|ZDB-GENE-080327-25 - symbol:lrrc4ba "leucine rich re... 257 1.7e-18 1
RGD|1306550 - symbol:Slitrk6 "SLIT and NTRK-like family, ... 257 2.2e-18 1
UNIPROTKB|Q92626 - symbol:PXDN "Peroxidasin homolog" spec... 260 2.4e-18 1
FB|FBgn0264089 - symbol:sli "slit" species:7227 "Drosophi... 260 2.4e-18 1
UNIPROTKB|Q86UN3 - symbol:RTN4RL2 "Reticulon-4 receptor-l... 249 2.7e-18 1
ZFIN|ZDB-GENE-090312-22 - symbol:mxra5 "matrix-remodellin... 208 3.2e-18 2
MGI|MGI:2669796 - symbol:Rtn4rl2 "reticulon 4 receptor-li... 248 3.4e-18 1
MGI|MGI:1315205 - symbol:Slit2 "slit homolog 2 (Drosophil... 270 3.9e-18 2
UNIPROTKB|Q6NUI6 - symbol:CHADL "Chondroadherin-like prot... 253 5.1e-18 1
MGI|MGI:1923481 - symbol:Igsf10 "immunoglobulin superfami... 206 5.7e-18 2
UNIPROTKB|Q5VT99 - symbol:LRRC38 "Leucine-rich repeat-con... 228 5.9e-18 1
UNIPROTKB|E2RFX7 - symbol:SLITRK6 "Uncharacterized protei... 253 6.0e-18 1
MGI|MGI:2679449 - symbol:Slitrk2 "SLIT and NTRK-like fami... 253 6.1e-18 1
UNIPROTKB|Q9HBW1 - symbol:LRRC4 "Leucine-rich repeat-cont... 251 6.2e-18 1
UNIPROTKB|O94813 - symbol:SLIT2 "Slit homolog 2 protein" ... 268 6.5e-18 2
MGI|MGI:106038 - symbol:Lrrn1 "leucine rich repeat protei... 251 6.9e-18 2
UNIPROTKB|F1NXL1 - symbol:RTN4RL2 "Uncharacterized protei... 227 7.5e-18 1
RGD|1564145 - symbol:Lrrn1 "leucine rich repeat neuronal ... 251 8.8e-18 2
UNIPROTKB|Q96NI6 - symbol:LRFN5 "Leucine-rich repeat and ... 249 1.2e-17 1
UNIPROTKB|F1Q057 - symbol:PXDN "Uncharacterized protein" ... 253 1.3e-17 1
RGD|1561361 - symbol:Slitrk2 "SLIT and NTRK-like family, ... 250 1.3e-17 1
UNIPROTKB|F1NN41 - symbol:PXDN "Uncharacterized protein" ... 253 1.3e-17 1
MGI|MGI:2443198 - symbol:Slitrk6 "SLIT and NTRK-like fami... 249 1.6e-17 1
MGI|MGI:3609246 - symbol:Lingo3 "leucine rich repeat and ... 246 1.7e-17 1
UNIPROTKB|F1P8A1 - symbol:SLIT2 "Uncharacterized protein"... 264 1.8e-17 2
UNIPROTKB|F1MLJ7 - symbol:SLIT2 "Uncharacterized protein"... 264 1.8e-17 2
UNIPROTKB|B3KTY4 - symbol:SLITRK2 "cDNA FLJ38959 fis, clo... 247 2.1e-17 1
UNIPROTKB|F1RP63 - symbol:SLITRK6 "Uncharacterized protei... 248 2.1e-17 1
UNIPROTKB|Q9H156 - symbol:SLITRK2 "SLIT and NTRK-like pro... 247 2.7e-17 1
RGD|1303079 - symbol:Amigo1 "adhesion molecule with Ig li... 242 3.0e-17 1
UNIPROTKB|F1RQ61 - symbol:SLITRK2 "Uncharacterized protei... 246 3.5e-17 1
UNIPROTKB|F1MUR6 - symbol:RTN4RL2 "Uncharacterized protei... 239 3.6e-17 1
UNIPROTKB|F1NHG5 - symbol:SLIT2 "Uncharacterized protein"... 259 3.8e-17 2
UNIPROTKB|Q6UXK5 - symbol:LRRN1 "Leucine-rich repeat neur... 249 3.8e-17 2
UNIPROTKB|A0N0X6 - symbol:LRRN1 "Leucine-rich repeat neur... 244 4.3e-17 1
MGI|MGI:2144814 - symbol:Lrfn5 "leucine rich repeat and f... 244 4.4e-17 1
RGD|1309357 - symbol:Lrfn5 "leucine rich repeat and fibro... 244 4.4e-17 1
RGD|1588563 - symbol:Slitrk4 "SLIT and NTRK-like family, ... 245 4.4e-17 1
WARNING: Descriptions of 644 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0015400 [details] [associations]
symbol:kek2 "kekkon-2" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HSSP:Q9BZR6
GeneTree:ENSGT00700000104028 FlyBase:FBgn0015400 EMBL:BT120011
RefSeq:NP_523551.1 UniGene:Dm.2402 SMR:Q9VKG1 MINT:MINT-1619269
STRING:Q9VKG1 EnsemblMetazoa:FBtr0080252 GeneID:34582
KEGG:dme:Dmel_CG4977 UCSC:CG4977-RA CTD:34582 InParanoid:Q9VKG1
OMA:DSPDEGY GenomeRNAi:34582 NextBio:789152 Uniprot:Q9VKG1
Length = 894
Score = 1040 (371.2 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 198/375 (52%), Positives = 264/375 (70%)
Query: 4 WIFLIATIIKIVSACPTS-CICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
WI L+A ++ I +ACP C+CKWKGGKQTVEC + L + EGMDP TQVL+++GN L+
Sbjct: 7 WIPLLA-LLAITAACPPEVCVCKWKGGKQTVECGGQQLSNLPEGMDPGTQVLNFSGNALQ 65
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
L +E+F +M L+NLQKIYLSR ++ I KAFRGLTNLV+LD S N LQ VPS+TF DY
Sbjct: 66 VLQSERFLRMDLLNLQKIYLSRNQLIRIHEKAFRGLTNLVELDLSENALQNVPSETFQDY 125
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
SLM+L+LSGNPI+++KT AF+ LS+L TLELS C +E IE+ AFVG+D+LEWL+LD N+
Sbjct: 126 SSLMRLSLSGNPIRELKTSAFRHLSFLTTLELSNCQVERIENEAFVGMDNLEWLRLDGNR 185
Query: 183 ITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVT 242
I I G++ILP LHGI LH N W CDC L+ + WL + TP+A +P C P RL
Sbjct: 186 IGFIQGTHILPKSLHGISLHSNRWNCDCRLLDIHFWLVNYNTPLAEEPKCMEPARLKGQV 245
Query: 243 IKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSA 302
IK L ++LAC P+++P + Y E+ EG+N+S+ C V AIPE K+ WLF+G + N+S+
Sbjct: 246 IKSLQREQLACLPEVSPQSSYTEVSEGRNMSITCLVRAIPEPKVLWLFNGQVMSNDSLM- 304
Query: 303 SESHAVYSTEE-----GTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLK 357
H Y +E G E K+SE+ IYN +DNGTF CV +N AG+T SNYT+R+++K
Sbjct: 305 DNLHMYYYIDETIGVSGAEEKRSEIFIYNVGAEDNGTFSCVGQNIAGTTFSNYTLRVIIK 364
Query: 358 EENVEVVTVFPLEYV 372
E V FP +Y+
Sbjct: 365 EPPVVNEVSFPRDYM 379
Score = 100 (40.3 bits), Expect = 1.6e-113, Sum P(2) = 1.6e-113
Identities = 43/181 (23%), Positives = 73/181 (40%)
Query: 478 PSYSISYQIEQNPDLVNDAESVD---KDRRAQGGEDTQDTQDKASE------AASVQYSD 528
P+ +YQ E+NPDLVNDAESV K + G +TQ + A+ +
Sbjct: 536 PASLRNYQ-EKNPDLVNDAESVKHKLKTAVSLDGAGEYETQSDCGQYEGCYQLAAAPHPH 594
Query: 529 SGSQCQEWGNVCYNRMQPMQHIVLNNVYNQPA----DIHLTPEKFMDRDG-YPVDFGLPK 583
G Q G+ R + + +PA D+HL P F+ +DG + D+
Sbjct: 595 QGHQHPHPGHPLMGRFAQAMTTLPRGMQLKPAPHQVDVHLNPVCFLGQDGSFAYDYSSAH 654
Query: 584 VPTHFPALVPATAYYRTLPHRRHTAANPNNRYSREAEFLSRSSQPASYEHYAPADVRYNI 643
+ P + P P+NR ++ +F + ++ + +RY++
Sbjct: 655 MVQQPPQ--QQQQQQQVQPANNFYRTLPHNRLHKQQQFQAAAAAGGNVGVGGNPTLRYSL 712
Query: 644 E 644
E
Sbjct: 713 E 713
Score = 80 (33.2 bits), Expect = 2.1e-111, Sum P(2) = 2.1e-111
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 610 NPNNRYSREAEFLSRSSQPASYEHYAPADVRYNIEG 645
NP RYS EAEF+ R SYE Y +VR+ EG
Sbjct: 705 NPTLRYSLEAEFIQRGPT-VSYEKYQLPNVRFTAEG 739
>FB|FBgn0015399 [details] [associations]
symbol:kek1 "kekkon-1" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0048477
"oogenesis" evidence=IMP] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway"
evidence=IGI;IMP;TAS] [GO:0005154 "epidermal growth factor receptor
binding" evidence=IPI] [GO:0007175 "negative regulation of
epidermal growth factor-activated receptor activity"
evidence=IDA;TAS] [GO:0016021 "integral to membrane" evidence=TAS]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0048019 "receptor
antagonist activity" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0022008 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0048477 GO:GO:0000910 GO:GO:0048019 InterPro:IPR013098
Pfam:PF07679 MEROPS:I43.001 GO:GO:0007175 HSSP:P07359 EMBL:U42767
ProteinModelPortal:P91643 SMR:P91643 STRING:P91643 PRIDE:P91643
FlyBase:FBgn0015399 InParanoid:P91643 OrthoDB:EOG48932C
ArrayExpress:P91643 Bgee:P91643 Uniprot:P91643
Length = 880
Score = 764 (274.0 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 152/346 (43%), Positives = 215/346 (62%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
S C T C CKWKGGKQTVEC+++ LI + E +DPNTQVLD +GN L+TL NE+F + L+
Sbjct: 88 STCQTVCACKWKGGKQTVECIDRHLIQIPEHIDPNTQVLDMSGNKLQTLSNEQFIRANLL 147
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
NLQK+YL C+I I+ + F+GLTNLV+LD SHN+L TVPS PSL +LTL+ N I
Sbjct: 148 NLQKLYLRNCKIGEIERETFKGLTNLVELDLSHNLLVTVPSLALGHIPSLRELTLASNHI 207
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+I++ AF L L+LS C I+ I AF GL L L+L+ NK++ + I
Sbjct: 208 HKIESQAFGNTPSLHKLDLSHCDIQTISAQAFGGLQGLTLLRLNGNKLSELLPKTIETLS 267
Query: 196 -LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSV-PPRLSSVTIKQLSIDELAC 253
LHGI+LH NPW CDC L + WL P + P+CS P R+ + L +DE AC
Sbjct: 268 RLHGIELHDNPWLCDCRLRDTKLWLMKRNIPYPVAPVCSGGPERIIDRSFADLHVDEFAC 327
Query: 254 EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES-MSASES-HAVYST 311
P++ P + Y+E G+N S+ C+ A+P A I W ++G + N S +A + H +
Sbjct: 328 RPEMLPISHYVEAAMGENASITCRARAVPAANINWYWNGRLLANNSAFTAYQRIHMLEQV 387
Query: 312 EEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLK 357
E G E K+S+L++ N+ D+ F CVAEN+AG +N+T+ + ++
Sbjct: 388 EGGFE-KRSKLVLTNAQETDSSEFYCVAENRAGMAEANFTLHVSMR 432
Score = 52 (23.4 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 9/12 (75%), Positives = 10/12 (83%)
Query: 574 GYPVDFGLPKVP 585
GYP D+GLP VP
Sbjct: 728 GYPNDYGLPLVP 739
Score = 45 (20.9 bits), Expect = 1.1e-82, Sum P(3) = 1.1e-82
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 464 DSGILVATNNMNTYPSYSISYQIEQNPDLVNDAESVDKDRRA 505
++G +++T + PS S NPDL+ND + D A
Sbjct: 573 NNGSVLSTASCFISPSGSTGNG-GNNPDLINDTKRFGSDEFA 613
>FB|FBgn0028370 [details] [associations]
symbol:kek3 "kekkon-3" species:7227 "Drosophila melanogaster"
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005887 "integral
to plasma membrane" evidence=ISM] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887
Gene3D:2.60.40.10 InterPro:IPR013783 EMBL:AE014134
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
GeneTree:ENSGT00700000104028 KO:K07523 HSSP:P13596 EMBL:BT044530
RefSeq:NP_001162986.1 RefSeq:NP_523575.1 UniGene:Dm.21548
SMR:Q9V430 IntAct:Q9V430 MINT:MINT-324955
EnsemblMetazoa:FBtr0080752 EnsemblMetazoa:FBtr0300848 GeneID:34912
KEGG:dme:Dmel_CG4192 UCSC:CG4192-RA CTD:34912 FlyBase:FBgn0028370
InParanoid:Q9V430 OMA:KMKETCD OrthoDB:EOG4P2NH5 GenomeRNAi:34912
NextBio:790842 Uniprot:Q9V430
Length = 1021
Score = 641 (230.7 bits), Expect = 3.3e-64, Sum P(2) = 3.3e-64
Identities = 134/368 (36%), Positives = 203/368 (55%)
Query: 1 MMYWIFLIATII-KIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGN 59
++ W+ + + ++ + CP C CKWK GK++V C+N +L + + +D TQ+LD +GN
Sbjct: 61 LLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNANLTHIPQPLDAGTQLLDLSGN 120
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
++ + ++ F L+NLQK+YL+RC + +I+ AFR L NLV+LD S N+L +PS
Sbjct: 121 EIQLIPDDSFATAQLLNLQKVYLARCHLRLIERHAFRKLINLVELDLSQNLLSAIPSLAL 180
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS-LEWLKL 178
L +L LSGNPI ++ AF + LV LELS C + I AF GL+S LEWLKL
Sbjct: 181 YHVSELRELRLSGNPILRVPDDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKL 240
Query: 179 DNNKITTI-SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPR 237
D N+++ + SG+ LHG++L N W C C L LR W+ P I P C PPR
Sbjct: 241 DGNRLSEVRSGTITSLASLHGLELARNTWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPR 300
Query: 238 LSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQN 297
LS +L +D+ AC PQI + EG+N+++ C V +P+ + WL I N
Sbjct: 301 LSGRAWDKLDVDDFACVPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVKWLLKNRLIAN 360
Query: 298 ESMSAS-ESHAVYSTEEGTEIKK----------SELLIYNSNIDDNGTFVCVAENQAGST 346
S +S + T T+ +K S L I +++ D G + C AEN+AG
Sbjct: 361 LSAGGDGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILTADMQDAGIYTCAAENKAGKV 420
Query: 347 SSNYTIRI 354
++ T+ +
Sbjct: 421 EASVTLAV 428
Score = 44 (20.5 bits), Expect = 3.3e-64, Sum P(2) = 3.3e-64
Identities = 21/92 (22%), Positives = 37/92 (40%)
Query: 553 NNVYNQPADIHLTPEKFMDRDGYPVDFGLPKVPTHFPALVPATAY----YRTLPHRRHTA 608
N+ + D+H+ P + +D G D + + A Y ++T P
Sbjct: 614 NSAPLEETDLHI-P-RLIDIGG--TDSASSSISSQVDAAARLAGYAGHTWKTTPIATTKI 669
Query: 609 ANPNNRYSREAEFLSRSSQPASYEHYA--PAD 638
+P+++ A S ++Q Y HY PAD
Sbjct: 670 NSPHSKPVTSAAPSSLNTQATPYAHYGNHPAD 701
>FB|FBgn0039862 [details] [associations]
symbol:kek6 "kek6" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 EMBL:AE014297 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 GO:GO:0046331 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 EMBL:BT100194
RefSeq:NP_651880.1 UniGene:Dm.24119 SMR:Q9V9V6
EnsemblMetazoa:FBtr0085821 GeneID:43729 KEGG:dme:Dmel_CG1804
UCSC:CG1804-RA CTD:43729 FlyBase:FBgn0039862 eggNOG:NOG238103
InParanoid:Q9V9V6 OMA:MGRRITA OrthoDB:EOG4S1RQ2 GenomeRNAi:43729
NextBio:835480 Uniprot:Q9V9V6
Length = 836
Score = 440 (159.9 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 111/357 (31%), Positives = 177/357 (49%)
Query: 4 WIFL--IA-TIIKIVS-ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGN 59
WI L +A T+ S +C ++C CKW GK++ C + L T+ + QVL N
Sbjct: 20 WILLCLVAWTVADDWSLSCASNCTCKWTNGKKSAICSSLQLTTIPNTLSTELQVLVLNDN 79
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
++ L+ E+F +GL+NLQ+IYL + + I ++FR L LV++D S N L+ + DTF
Sbjct: 80 HIPYLNREEFSTLGLLNLQRIYLKKSEVQYIHKESFRNLKILVEIDLSDNKLEMLDKDTF 139
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L+GNP+K++ F L +L TL++ C I I+ + L+ LE+L L
Sbjct: 140 MGNDRLRILYLNGNPLKRLAAYQFPILPHLRTLDMHDCLISYIDPMSLANLNLLEFLNLK 199
Query: 180 NNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRL 238
NN + ++S L + L NPW C+C L R W +++ ++ +C PP
Sbjct: 200 NNLLESLSEYVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRLS-SVSLVCKGPPAQ 258
Query: 239 SSVTIKQLSIDEL-ACEP--QITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPI 295
T + DEL C P +I + I G N + C V P ++ W +G +
Sbjct: 259 KDRTWDSVD-DELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEVAWELNGKIL 317
Query: 296 QNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
N+++ ES ++ S + S L ++N D GT+ C N GS + N +I
Sbjct: 318 DNDNV-LFESESIASDKLW-----SNLTVFNVTSLDAGTYACTGSNSIGSMTQNISI 368
>FB|FBgn0031016 [details] [associations]
symbol:kek5 "kekkon5" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030510 "regulation of BMP signaling pathway" evidence=IDA]
InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014298 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030510 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:Q10466 FlyBase:FBgn0031016
EMBL:BT023770 RefSeq:NP_001245746.1 RefSeq:NP_573382.1
RefSeq:NP_728242.1 RefSeq:NP_728243.1 UniGene:Dm.33776 SMR:Q9VWI6
MINT:MINT-297003 EnsemblMetazoa:FBtr0074707
EnsemblMetazoa:FBtr0074708 EnsemblMetazoa:FBtr0309223
EnsemblMetazoa:FBtr0309224 GeneID:32930 KEGG:dme:Dmel_CG12199
UCSC:CG12199-RA CTD:32930 InParanoid:Q9VWI6 OMA:YDNLGLR
GenomeRNAi:32930 NextBio:781084 Uniprot:Q9VWI6
Length = 931
Score = 413 (150.4 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 97/346 (28%), Positives = 167/346 (48%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+ +C T C C+W GK++ +C NK+L + + M QVLD+ N + L E+F GL
Sbjct: 40 MQSCGT-CHCQWNSGKKSADCKNKALTKIPQDMSNEMQVLDFAHNQIPELRREEFLLAGL 98
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N+ KI+L C I + +AF+GL L++LD S N ++ + TF L + ++ N
Sbjct: 99 PNVHKIFLRNCTIQEVHREAFKGLHILIELDLSGNRIRELHPGTFAGLEKLRNVIINNNE 158
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--L 192
I+ + F LS+L +E + ++ F G +L + L+ N+++ + L
Sbjct: 159 IEVLPNHLFVNLSFLSRIEFRNNRLRQVQLHVFAGTMALSAISLEQNRLSHLHKETFKDL 218
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLESTK--TPMAIDPICSVPPRLSSVTIKQLSIDE 250
+H + L N W C C L R + S + TP D C PP+L ++ +
Sbjct: 219 QKLMH-LSLQGNAWNCSCELQDFRDFAISKRLYTPPT-D--CQEPPQLRGKLWSEVPSEN 274
Query: 251 LACEPQITPST-FYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVY 309
AC P+I S ++E N+SL C++ P +TW+++ P+Q +V
Sbjct: 275 FACRPRILGSVRSFIEANHD-NISLPCRIVGSPRPNVTWVYNKRPLQQYDPRVRVLTSVE 333
Query: 310 ST-EEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
E+ +++ SEL I D G + CVA+N+ G + + + +
Sbjct: 334 QMPEQPSQVLTSELRIVGVRASDKGAYTCVADNRGGRAEAEFQLLV 379
>FB|FBgn0032484 [details] [associations]
symbol:kek4 "kekkon4" species:7227 "Drosophila melanogaster"
[GO:0005887 "integral to plasma membrane" evidence=ISM] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:AE014134 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00700000104028 HSSP:P13596 FlyBase:FBgn0032484
EMBL:AF507920 RefSeq:NP_609615.2 UniGene:Dm.417 SMR:Q9VK22
EnsemblMetazoa:FBtr0080485 GeneID:34718 KEGG:dme:Dmel_CG9431
UCSC:CG9431-RA CTD:34718 InParanoid:Q9VK22 OMA:PRIPEDI
GenomeRNAi:34718 NextBio:789865 Uniprot:Q9VK22
Length = 649
Score = 404 (147.3 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 111/384 (28%), Positives = 188/384 (48%)
Query: 2 MYWIFLIATIIKIVSA-----CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDY 56
++ I+ +A I + SA C +C CKW GK+T +C N SL V E + P QVLD
Sbjct: 21 LFKIYCLALIFRSASADWLLDCG-NCHCKWNSGKKTADCRNLSLSGVPEYLSPEVQVLDL 79
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
+ N++ L F L NLQK+ + + ++ ++F L L++LD S+N+L +
Sbjct: 80 SHNHIFYLEENAFLTTHLQNLQKLLIRNGTLKYLNQRSFTQLQILIELDLSNNLLVDLLP 139
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
+ F + + L+GN ++ ++ G F+ L YL +EL + + I+ AFVG+ L +
Sbjct: 140 NVFDCLSKVRAIFLNGNLLQALRHGVFRNLKYLHKIELKRNRLVSIDAKAFVGVPLLSQI 199
Query: 177 KLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSV 234
LDNN++T + + T L + L NPW C C L R ++ + P C
Sbjct: 200 YLDNNELTKLRVESFQDLTKLTALSLVENPWNCTCDLQMFRDFVIGMN--LYTPPTSCHY 257
Query: 235 PPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGK-NVSLLCKVSAIPEAKITWLFDGV 293
P +L + + AC+P+I T I K NV+L+C+V P I W +
Sbjct: 258 PLQLRGRLWIEDQPEAFACKPKIVYPTLSTSINTSKENVTLICRVHGSPNTVIAWDYTNQ 317
Query: 294 PIQNES--MSASESHAVYST---EEGTEIKK-------SELLIYNSNIDDNGTFVCVAEN 341
++ S + + + +Y E+ ++I+K S L I N+ D G + C+AEN
Sbjct: 318 VYESRSKPVKSLQKQRIYIELLREDESKIRKFGHDVFVSRLTIVNARKSDEGVYTCLAEN 377
Query: 342 QAGSTSSNYTIRIVLKE-ENVEVV 364
G S + ++ +V K+ E + ++
Sbjct: 378 PGGKDSVHISV-VVQKDMERISLI 400
>ZFIN|ZDB-GENE-060503-496 [details] [associations]
symbol:lrrc24 "leucine rich repeat containing 24"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-060503-496
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:441381 EMBL:BX000489
IPI:IPI00876679 RefSeq:XP_694151.2 UniGene:Dr.141919
Ensembl:ENSDART00000114047 GeneID:565790 KEGG:dre:565790
NextBio:20887101 Bgee:F1QV37 Uniprot:F1QV37
Length = 594
Score = 348 (127.6 bits), Expect = 8.0e-29, P = 8.0e-29
Identities = 86/292 (29%), Positives = 148/292 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A + ACP+ C C TVEC + + + +G+ TQ + N + +
Sbjct: 11 VLMLAQLCSTSLACPSGCRCY----SLTVECGSIGIKEIPQGITQGTQTIFLQDNAIGQI 66
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+G L +YL IS ++ AFR L L++L + N + + +D F
Sbjct: 67 RQRDLSDLG--QLHYLYLQNNSISTLEPGAFRSLGLLLELALNGNRIHLITADVFRGLDH 124
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L+GN I +++ F+ L L L L + +EV+ D A VGL SL L L N +
Sbjct: 125 LRILYLAGNQINRLEDYTFRGLQRLQELHLQENVLEVLGDQALVGLSSLALLDLSRNNLR 184
Query: 185 TISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWL--ESTKTPMAIDP--ICSVPPRLS 239
T+S +++ P L + + NPW CDC L LR W+ E + + + +C+ PPRLS
Sbjct: 185 TLSPASLKPLVSLQVLRVTDNPWRCDCALHWLRGWINEEGQRLLSSAERRMLCAEPPRLS 244
Query: 240 SVTIKQLSIDELACEP---QITPSTFYLEIQEGKNVSLLCKVSAIPEAKITW 288
+++ ++ + L C P Q+ PS +L ++ G+++ + C+ S P+ ++TW
Sbjct: 245 HLSLVEVPPNSLVCIPPVVQLEPS--HLTVRLGESLRVSCQASGYPQPQVTW 294
>UNIPROTKB|Q50LG9 [details] [associations]
symbol:LRRC24 "Leucine-rich repeat-containing protein 24"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG255871
EMBL:AB178281 EMBL:AC084125 EMBL:BC111067 IPI:IPI00455850
RefSeq:NP_001019849.2 UniGene:Hs.459391 UniGene:Hs.740859
ProteinModelPortal:Q50LG9 SMR:Q50LG9 DMDM:296434571 PaxDb:Q50LG9
PRIDE:Q50LG9 Ensembl:ENST00000529415 GeneID:441381 KEGG:hsa:441381
UCSC:uc003zdm.3 CTD:441381 GeneCards:GC08M145747 HGNC:HGNC:28947
HPA:HPA037689 neXtProt:NX_Q50LG9 PharmGKB:PA142671520
HOGENOM:HOG000234857 HOVERGEN:HBG079563 InParanoid:Q50LG9
OMA:NITLAHA OrthoDB:EOG4DR9CG GenomeRNAi:441381 NextBio:110128
ArrayExpress:Q50LG9 Bgee:Q50LG9 CleanEx:HS_LRRC24
Genevestigator:Q50LG9 GermOnline:ENSG00000177021 Uniprot:Q50LG9
Length = 513
Score = 320 (117.7 bits), Expect = 5.6e-26, P = 5.6e-26
Identities = 97/351 (27%), Positives = 154/351 (43%)
Query: 7 LIATIIKIVSA-CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH 65
L+ ++ + +A CP +C C TVEC L V G+ P TQ L NN+ L
Sbjct: 11 LLLLLLPLRAAGCPAACRCY----SATVECGALRLRVVPLGIPPGTQTLFLQDNNIARL- 65
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
E L L+++YL + +++ AFR L++L + N L+ + S F L
Sbjct: 66 -EPGALAPLAALRRLYLHNNSLRALEAGAFRAQPRLLELALTSNRLRGLRSGAFVGLAQL 124
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L+GN + ++ F L L L L + IE++ED A GL SL L L N++ T
Sbjct: 125 RVLYLAGNQLARLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGT 184
Query: 186 ISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP----ICSVPPRLSS 240
IS + P L + L NPW CDC L L W++ + +C+ PPRL+
Sbjct: 185 ISREALQPLASLQVLRLTENPWRCDCALHWLGAWIKEGGQRLLTSRDRKIMCAEPPRLAL 244
Query: 241 VTIKQLSIDELAC-EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
++ +S L C P + L G+++ + C+ S P+ +TW VP E
Sbjct: 245 QSLLDVSHSSLICIPPSVHVQPLELTANLGEDLRVACQASGYPQPLVTWR--KVPQPREG 302
Query: 300 MSASESHAV-----YSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
+++ ++ L + N + G + C A N G+
Sbjct: 303 RPRAQAQLEGGLLGLGGHSASDTGSGMLFLSNITLAHAGKYECEASNAGGA 353
>MGI|MGI:3605040 [details] [associations]
symbol:Lrrc24 "leucine rich repeat containing 24"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3605040 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
eggNOG:NOG255871 GeneTree:ENSGT00700000104028 CTD:441381
HOGENOM:HOG000234857 HOVERGEN:HBG079563 OMA:NITLAHA
OrthoDB:EOG4DR9CG EMBL:AK048678 EMBL:AK078176 EMBL:BC116884
EMBL:BC116886 IPI:IPI00221813 RefSeq:NP_932787.1 UniGene:Mm.289666
ProteinModelPortal:Q8BHA1 SMR:Q8BHA1 PRIDE:Q8BHA1
Ensembl:ENSMUST00000049956 GeneID:378937 KEGG:mmu:378937
UCSC:uc007wme.1 InParanoid:Q14AD4 NextBio:401012 Bgee:Q8BHA1
CleanEx:MM_LRRC24 Genevestigator:Q8BHA1
GermOnline:ENSMUSG00000033707 Uniprot:Q8BHA1
Length = 521
Score = 315 (115.9 bits), Expect = 2.3e-25, P = 2.3e-25
Identities = 100/343 (29%), Positives = 154/343 (44%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP +C C TVEC L V G+ P TQ L N++ H E+ L
Sbjct: 29 TGCPAACRCY----SATVECGALRLRVVPPGIPPGTQTLFLQDNSIA--HLEQGSLAPLA 82
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
L+ +YL + ++S AFR L++L + N L+ + F L L L+GN +
Sbjct: 83 ALRHLYLHNNTLRALESGAFRAQPRLLELALTGNRLRGLRGGAFVGLVQLRVLYLAGNQL 142
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-T 194
++ F L L L L + IE++ED A GL SL L L N++ TIS + P +
Sbjct: 143 AKLLDFTFLHLPRLQELHLQENSIELLEDQALAGLSSLALLDLSRNQLGTISKEALQPLS 202
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLES--TKTPMAIDP--ICSVPPRLSSVTIKQLSIDE 250
L + L NPW CDC L L W++ + + D C+ PPRL+ ++ ++S
Sbjct: 203 SLQVLRLTENPWRCDCALHWLGSWIKEGGRRLLSSRDKKITCAEPPRLALQSLLEVSGGS 262
Query: 251 LACEP---QITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-----DGVPIQNESMSA 302
L C P + P F + G+++ + C+ S P+ + W DG P ++ +
Sbjct: 263 LICIPPSVNVEPPEFTANL--GEDLQVACQASGYPQPLVVWRKVPQPRDGKP---QAQAQ 317
Query: 303 SESHAVYSTEEGTEIKKSELL-IYNSNIDDNGTFVCVAENQAG 344
E A GT S +L + N + G + C A N G
Sbjct: 318 LEGGAPGLGGHGTRDTGSGMLFLTNITLAHAGKYECEAANAGG 360
>UNIPROTKB|F1P2C4 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00823432 Ensembl:ENSGALT00000038578
ArrayExpress:F1P2C4 Uniprot:F1P2C4
Length = 423
Score = 301 (111.0 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 94/330 (28%), Positives = 154/330 (46%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 105 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 162
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 163 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LVKLDELDLSGNHLTAIRPGSFQGLM 220
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWT 207
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 221 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHNPWN 280
Query: 208 CDCLLIGLRRWLESTKTPM--AIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W++ K P A C PP L I +L ++ C P I L
Sbjct: 281 CNCDILWLSWWIKD-KAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADL 339
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG + C+ S ++W+ P N S+ +H Y + L
Sbjct: 340 NVTEGMAAEMKCRAST-SLTSVSWI---TP--NGSVM---THGAYRVRIAV-LSDGTLNF 389
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ D G + C+ N G+T+++ T+ +
Sbjct: 390 TKVTVQDTGLYTCMVSNSVGNTTASATLNV 419
Score = 212 (79.7 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP+ C C + K V CV K+L V +G+ NT++L+ N ++ + F+ L +L
Sbjct: 24 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 79
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ + LSR I I+ AF GL NL L+ N L T+P+ F L +L L NPI+
Sbjct: 80 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 139
Query: 138 IKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-TG 195
I + AF + L L+L + + I + AF GL +L +L L + I N+ P
Sbjct: 140 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLVK 197
Query: 196 LHGIDLHHNPWT 207
L +DL N T
Sbjct: 198 LDELDLSGNHLT 209
>UNIPROTKB|F1NTY3 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:WITPNGS PANTHER:PTHR24369:SF8
EMBL:AADN02033191 EMBL:AADN02033192 EMBL:AADN02033193
EMBL:AADN02033194 EMBL:AADN02033195 EMBL:AADN02033196
EMBL:AADN02033197 EMBL:AADN02033198 EMBL:AADN02033199
EMBL:AADN02033200 EMBL:AADN02033201 EMBL:AADN02033202
EMBL:AADN02033203 EMBL:AADN02033204 EMBL:AADN02033205
EMBL:AADN02033206 EMBL:AADN02033207 EMBL:AADN02033208
EMBL:AADN02033209 EMBL:AADN02033210 EMBL:AADN02033211
EMBL:AADN02033212 EMBL:AADN02033213 EMBL:AADN02033214
EMBL:AADN02033215 EMBL:AADN02033216 EMBL:AADN02033217
EMBL:AADN02033218 EMBL:AADN02033219 EMBL:AADN02033220
EMBL:AADN02033221 EMBL:AADN02033222 EMBL:AADN02033223
EMBL:AADN02033224 IPI:IPI00573827 Ensembl:ENSGALT00000012910
ArrayExpress:F1NTY3 Uniprot:F1NTY3
Length = 545
Score = 301 (111.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 94/330 (28%), Positives = 154/330 (46%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 96 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 153
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 154 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LVKLDELDLSGNHLTAIRPGSFQGLM 211
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWT 207
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 212 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLRLERIHLHHNPWN 271
Query: 208 CDCLLIGLRRWLESTKTPM--AIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W++ K P A C PP L I +L ++ C P I L
Sbjct: 272 CNCDILWLSWWIKD-KAPSNTACCARCHTPPSLKGRYIGELDLNYFTCYAPVIVEPPADL 330
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG + C+ S ++W+ P N S+ +H Y + L
Sbjct: 331 NVTEGMAAEMKCRAST-SLTSVSWI---TP--NGSVM---THGAYRVRIAV-LSDGTLNF 380
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ D G + C+ N G+T+++ T+ +
Sbjct: 381 TKVTVQDTGLYTCMVSNSVGNTTASATLNV 410
Score = 212 (79.7 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 64/192 (33%), Positives = 96/192 (50%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP+ C C + K V CV K+L V +G+ NT++L+ N ++ + F+ L +L
Sbjct: 15 CPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQIIKVNSFKH--LRHL 70
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ + LSR I I+ AF GL NL L+ N L T+P+ F L +L L NPI+
Sbjct: 71 EILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 130
Query: 138 IKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-TG 195
I + AF + L L+L + + I + AF GL +L +L L + I N+ P
Sbjct: 131 IPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP--NLTPLVK 188
Query: 196 LHGIDLHHNPWT 207
L +DL N T
Sbjct: 189 LDELDLSGNHLT 200
>UNIPROTKB|F1PSS7 [details] [associations]
symbol:SLIT1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 GeneTree:ENSGT00700000104083
OMA:KCVHGKC EMBL:AAEX03015440 Ensembl:ENSCAFT00000014303
Uniprot:F1PSS7
Length = 1534
Score = 314 (115.6 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 86/256 (33%), Positives = 126/256 (49%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ L A ++ +ACP C C G TV+C L + + + +T+ L+ GNN+
Sbjct: 19 WLLLWAAAWRLGATACPALCTCT--GA--TVDCHGAGLQAIPKNIPRSTERLELNGNNIT 74
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F +GL L+ + L +I V++ AF + L L + N L T+P F +
Sbjct: 75 RIHKNDF--VGLKQLRVLQLMENQIGVVERGAFDDMKELERLRLNRNQLHTLPELLFQNN 132
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N I+ I AF+ + L L+L K I IE+ AF L LE L L+NN
Sbjct: 133 QALSRLDLSENTIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
ITTI S N +P L LH N CDC L L +WL T + + CS P L
Sbjct: 193 ITTIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLSQWLRQRPT-IGLFTQCSGPASLRG 250
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ E +C Q
Sbjct: 251 LNVAEVQKSEFSCSGQ 266
Score = 200 (75.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 52/178 (29%), Positives = 92/178 (51%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ LT+L ++ S+N + + F S+ +L L+ N ++
Sbjct: 544 ELRLNNNEISILEATGIFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
I++G F+ L L TL L I I + +F GL ++ L L +N+I TIS G+ L
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQAL 663
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 664 STLNLLANPFNCNCQLAWLGDWLRRRKIVTG-NPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 166 (63.5 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 62/216 (28%), Positives = 89/216 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L I I AF L +D S+N + + D F SL L L GN I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ G F L L L L+ I + AF L +L L L +NKI +++ T L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCVRPDAFQDLQNLSLLSLYDNKIQSLAKGTF--TSL 428
Query: 197 HGID-LH--HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
I LH NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLRTNPIETS-GARCASPRRLANKRIGQIKSKKFRC 487
Query: 254 ---EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKI 286
E P T ++ N +C EA +
Sbjct: 488 SAKEQYFIPGTEDYQLNSECNSDAVCPHKCRCEASL 523
Score = 142 (55.0 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 47/163 (28%), Positives = 69/163 (42%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C+ EC + L + E + +T L N + L K L
Sbjct: 511 AVCPHKCRCE----ASLAECSSLKLTKIPERIPQSTAELRLNNNEISILEATGIFKK-LT 565
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+KI LS ++S I+ AF G ++ +L + N L+++ S F L L L N I
Sbjct: 566 HLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRI 625
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L I I AF L +L L L
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNQIATISPGAFDTLQALSTLNL 668
Score = 141 (54.7 bits), Expect = 6.1e-05, Sum P(2) = 6.1e-05
Identities = 45/156 (28%), Positives = 65/156 (41%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N VP + L + LS N I + +F +S L TL LS +
Sbjct: 762 NVTELYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
+ I AF GL SL L L N I+T+ G T L + + NP CDC L L W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLREGIFTDVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 219 LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+++ I C PP + + + C+
Sbjct: 881 VKTGYKEPGIAR-CVGPPDMEGKLLLTTPAKKFECQ 915
Score = 140 (54.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 41/137 (29%), Positives = 60/137 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C NK L + +G+ N L GN + Q L
Sbjct: 734 CPQECACL----DTVVRCSNKHLHVLPKGIPKNVTELYLDGNQFTLVPG---QLSTFKYL 786
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS +IS + + +F ++ L L S+N LQ +P F SL L+L GN I
Sbjct: 787 QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIST 846
Query: 138 IKTGAFQPLSYLVTLEL 154
++ G F ++ L L +
Sbjct: 847 LREGIFTDVTSLSHLAI 863
Score = 133 (51.9 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 45/165 (27%), Positives = 70/165 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C G V+C K L + + + N +K++ F
Sbjct: 281 SCPAMCSCS--NG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--K 334
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I LS +I+ I AF+GL +L L N + +P F +L L L+ N I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ AFQ L L L L I+ + F L +++ L L N
Sbjct: 395 CVRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 46 (21.3 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 446 NGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQNPDLVNDAE 497
+ G ++ +G ND M G + + + +YPS +I Y E +ND +
Sbjct: 1199 DNGILLYNGDNDHMAVELYQGHVRVSYDPGSYPSSAI-YSAET----INDGQ 1245
Score = 42 (19.8 bits), Expect = 3.9e-23, Sum P(2) = 3.9e-23
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 524 VQYSDSGSQCQEWGNVCYNRMQPMQH 549
+QY+ G C++ + C + + P QH
Sbjct: 1033 LQYTGRG--CEQLVDFCSSDLNPCQH 1056
>UNIPROTKB|E1C7Z9 [details] [associations]
symbol:E1C7Z9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0022028 "tangential migration from
the subventricular zone to the olfactory bulb" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0048495 "Roundabout binding" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0050919
"negative chemotaxis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0005615 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 InterPro:IPR025875
Pfam:PF12799 Pfam:PF01463 GeneTree:ENSGT00700000104083
GO:GO:0050919 EMBL:AADN02046435 EMBL:AADN02046436 EMBL:AADN02046437
EMBL:AADN02046438 EMBL:AADN02046439 EMBL:AADN02046440
EMBL:AADN02046441 EMBL:AADN02046442 IPI:IPI00823289
Ensembl:ENSGALT00000012327 Uniprot:E1C7Z9
Length = 819
Score = 310 (114.2 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 85/256 (33%), Positives = 125/256 (48%)
Query: 4 WIFLIATIIK-IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ + + +ACP C C G TV+C +L V + + T+ L+ GNN+
Sbjct: 26 WLLAFVALCRGRAAACPPLCACS---GT-TVDCHGTALRAVPKSIPRGTERLELNGNNIT 81
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F GL L+ + L +ISV++ AF + L L + N L T+P F
Sbjct: 82 RIHKNDFS--GLKQLRVLQLMENQISVVERGAFDDMKELERLRLNRNQLHTLPELLFQHN 139
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N I+ I AF+ + L L+L K I IED AF L LE L L+NN
Sbjct: 140 QALSRLDLSENFIQAIPRKAFRGATDLKNLQLDKNQISCIEDGAFRALRGLEVLTLNNNN 199
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
IT+I S N +P L LH N CDC L L +WL T + + C+ P +L
Sbjct: 200 ITSIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLAQWLRQRPT-IGLFTQCAAPAQLRG 257
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ +E +C Q
Sbjct: 258 LNVAEIQKNEFSCSGQ 273
Score = 165 (63.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 71/271 (26%), Positives = 109/271 (40%)
Query: 93 KAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTL 152
K R + L D S+N + + D F SL L L GN I + G F L L L
Sbjct: 340 KKLRRILPLGFRDLSNNQISEIAPDAFQGLRSLNSLVLYGNKITDLPKGVFGGLFALQLL 399
Query: 153 ELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGID-LH--HNPWTCD 209
L+ I + AF L +L L L +NKI +++ T L I LH NP+ CD
Sbjct: 400 LLNANKINCVRADAFQDLQNLSLLSLYDNKIQSLAKGTF--TSLRAIQTLHLAQNPFVCD 457
Query: 210 CLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC---EPQITPSTFYLEI 266
C L L +L + + C+ P RL++ I Q+ + C E P T ++
Sbjct: 458 CNLKWLADFLRANPIETS-GARCASPRRLANKRIGQIKSKKFRCSAKEQYFIPGTEDYQL 516
Query: 267 QEGKNVSLLCKVSAIPEA--------KITWLFDGVPIQNESMSASESHAVYSTEEGTEIK 318
N ++C EA K+T + + +P + + + S E T I
Sbjct: 517 NSECNSDVVCPPKCRCEAGVVECSNLKLTKIPERIPQSTAELRLNNNEI--SILEATGIF 574
Query: 319 KSELLIYNSNIDDNGTFVCVAENQAGSTSSN 349
K + N+ +N + AG+ +N
Sbjct: 575 KKLPHLKKINLSNNKVSEIEGIHHAGAIGTN 605
Score = 135 (52.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 44/179 (24%), Positives = 84/179 (46%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ L +L ++ S+N + + L G+P+
Sbjct: 557 ELRLNNNEISILEATGIFKKLPHLKKINLSNNKVSEIEGIHHAGAIGTNVGPLWGHPLPA 616
Query: 138 IKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTG 195
+ GA + L L + + I I + +F GL ++ L L +N+I+TI+ G+
Sbjct: 617 SRAGAVFCWAQLQPLGMLRNNRISCIHNDSFTGLRNVRLLSLYDNQISTIAPGAFDTLQS 676
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
L ++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 677 LSTLNLLANPFNCNCQLAWLGDWLRKRKIVTG-NPRCQHPDFLRQIPLQDVAFPDFRCE 734
Score = 38 (18.4 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 590 ALVPATAYYRTLPHRRHTAANPNNRYS 616
+++ AT ++ LPH + + NN+ S
Sbjct: 566 SILEATGIFKKLPHLKKINLS-NNKVS 591
>UNIPROTKB|F1SHH6 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:CU607014 RefSeq:XP_003122907.1
ProteinModelPortal:F1SHH6 Ensembl:ENSSSCT00000014510
GeneID:100522726 KEGG:ssc:100522726 Uniprot:F1SHH6
Length = 640
Score = 297 (109.6 bits), Expect = 5.2e-23, P = 5.2e-23
Identities = 99/352 (28%), Positives = 160/352 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 128 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 185
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 186 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LVKLDELDLSGNHLSAIRPGSFQGLM 243
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 244 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Query: 207 TCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W++ + A C+ PP L I +L + C P I L
Sbjct: 304 NCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ S ++W+ P N ++ +H Y + L
Sbjct: 364 NVTEGMAAELKCRAST-SLTSVSWI---TP--NGTVM---THGAYKVRIAV-LSDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLIVS 376
N + D G + C+ N G+T+++ T+ NV T P Y V+
Sbjct: 414 TNVTVQDTGMYTCMVSNSVGNTTASATL-------NVTAATTTPFSYFSTVT 458
Score = 217 (81.4 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V CV K+L V +G+ NT++L+ N ++ +
Sbjct: 35 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQII 91
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ L +L+ + LSR I I+ AF GL NL L+ N L T+P+ F
Sbjct: 92 KVNSFKH--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 209
Query: 184 TTISGSNILP-TGLHGIDLHHN 204
I N+ P L +DL N
Sbjct: 210 REIP--NLTPLVKLDELDLSGN 229
>UNIPROTKB|E2REC5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:AAEX03011364 RefSeq:XP_540535.1
ProteinModelPortal:E2REC5 Ensembl:ENSCAFT00000010899 GeneID:483417
KEGG:cfa:483417 NextBio:20857811 Uniprot:E2REC5
Length = 639
Score = 296 (109.3 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 99/352 (28%), Positives = 160/352 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 128 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 185
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 186 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LIKLDELDLSGNHLSAIRPGSFQGLM 243
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 244 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Query: 207 TCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W++ + A C+ PP L I +L + C P I L
Sbjct: 304 NCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ S ++W+ P N ++ +H Y + L
Sbjct: 364 NVTEGMAAELKCRAST-SLTSVSWI---TP--NGTVM---THGAYKVRIAV-LSDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLIVS 376
N + D G + C+ N G+T+++ T+ NV T P Y V+
Sbjct: 414 TNVTVQDTGMYTCMVSNSVGNTTASATL-------NVTAATTTPFSYFSTVT 458
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V CV K+L V +G+ NT++L+ N ++ +
Sbjct: 35 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQII 91
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ L +L+ + LSR I I+ AF GL NL L+ N L T+P+ F
Sbjct: 92 KVNSFKH--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 209
Query: 184 TTISGSNILPT-GLHGIDLHHN 204
I N+ P L +DL N
Sbjct: 210 REIP--NLTPLIKLDELDLSGN 229
>UNIPROTKB|F1MXH5 [details] [associations]
symbol:LRRC4C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050770 "regulation of axonogenesis" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:DAAA02041416 IPI:IPI00693604
RefSeq:XP_002693573.1 RefSeq:XP_003583216.1 RefSeq:XP_003583217.1
RefSeq:XP_003583218.1 RefSeq:XP_003587053.1 RefSeq:XP_003587054.1
RefSeq:XP_003587055.1 RefSeq:XP_883783.1 PRIDE:F1MXH5
Ensembl:ENSBTAT00000009633 GeneID:528664 KEGG:bta:528664
NextBio:20874880 Uniprot:F1MXH5
Length = 640
Score = 296 (109.3 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 99/352 (28%), Positives = 160/352 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 128 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 185
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 186 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LIKLDELDLSGNHLSAIRPGSFQGLM 243
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 244 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Query: 207 TCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W++ + A C+ PP L I +L + C P I L
Sbjct: 304 NCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ S ++W+ P N ++ +H Y + L
Sbjct: 364 NVTEGMAAELKCRAST-SLTSVSWI---TP--NGTVM---THGAYKVRIAV-LSDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLIVS 376
N + D G + C+ N G+T+++ T+ NV T P Y V+
Sbjct: 414 TNVTVQDTGMYTCMVSNSVGNTTASATL-------NVTAATTTPFSYFSTVT 458
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V CV K+L V +G+ NT++L+ N ++ +
Sbjct: 35 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICVRKNLRDVPDGISTNTRLLNLHENQIQII 91
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ L +L+ + LSR I I+ AF GL NL L+ N L T+P+ F
Sbjct: 92 KVNSFKH--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 209
Query: 184 TTISGSNILPT-GLHGIDLHHN 204
I N+ P L +DL N
Sbjct: 210 REIP--NLTPLIKLDELDLSGN 229
>UNIPROTKB|Q9HCJ2 [details] [associations]
symbol:LRRC4C "Leucine-rich repeat-containing protein 4C"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=NAS] [GO:0050770
"regulation of axonogenesis" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
EMBL:CH471064 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AB046800 EMBL:AY358293 EMBL:AK289646
EMBL:BC041374 IPI:IPI00014223 RefSeq:NP_001245348.1
RefSeq:NP_065980.1 UniGene:Hs.741547 PDB:3ZYJ PDBsum:3ZYJ
ProteinModelPortal:Q9HCJ2 SMR:Q9HCJ2 IntAct:Q9HCJ2 STRING:Q9HCJ2
PhosphoSite:Q9HCJ2 DMDM:57012973 PRIDE:Q9HCJ2
Ensembl:ENST00000278198 Ensembl:ENST00000527150
Ensembl:ENST00000528697 Ensembl:ENST00000530763 GeneID:57689
KEGG:hsa:57689 UCSC:uc001mxa.1 CTD:57689 GeneCards:GC11M040135
HGNC:HGNC:29317 MIM:608817 neXtProt:NX_Q9HCJ2 PharmGKB:PA142671534
InParanoid:Q9HCJ2 KO:K07523 OMA:WITPNGS OrthoDB:EOG4XKV6K
PhylomeDB:Q9HCJ2 GenomeRNAi:57689 NextBio:64523 ArrayExpress:Q9HCJ2
Bgee:Q9HCJ2 CleanEx:HS_LRRC4C Genevestigator:Q9HCJ2
GermOnline:ENSG00000148948 PANTHER:PTHR24369:SF8 Uniprot:Q9HCJ2
Length = 640
Score = 296 (109.3 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 99/352 (28%), Positives = 160/352 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 128 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 185
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 186 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LIKLDELDLSGNHLSAIRPGSFQGLM 243
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 244 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Query: 207 TCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W++ + A C+ PP L I +L + C P I L
Sbjct: 304 NCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ S ++W+ P N ++ +H Y + L
Sbjct: 364 NVTEGMAAELKCRAST-SLTSVSWI---TP--NGTVM---THGAYKVRIAV-LSDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLIVS 376
N + D G + C+ N G+T+++ T+ NV T P Y V+
Sbjct: 414 TNVTVQDTGMYTCMVSNSVGNTTASATL-------NVTAATTTPFSYFSTVT 458
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V CV K+L V +G+ NT++L+ N ++ +
Sbjct: 35 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQII 91
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ L +L+ + LSR I I+ AF GL NL L+ N L T+P+ F
Sbjct: 92 KVNSFKH--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 209
Query: 184 TTISGSNILPT-GLHGIDLHHN 204
I N+ P L +DL N
Sbjct: 210 REIP--NLTPLIKLDELDLSGN 229
>MGI|MGI:2442636 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0016020 "membrane" evidence=ISO;ISS] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0050770 "regulation of
axonogenesis" evidence=ISO;ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2442636 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0016020 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 EMBL:AK032467 EMBL:AK034276
EMBL:AK048322 EMBL:BC094588 IPI:IPI00309419 RefSeq:NP_848840.3
UniGene:Mm.241682 ProteinModelPortal:Q8C031 SMR:Q8C031
DIP:DIP-42049N MINT:MINT-1895606 STRING:Q8C031 PhosphoSite:Q8C031
PRIDE:Q8C031 Ensembl:ENSMUST00000059049 Ensembl:ENSMUST00000135431
Ensembl:ENSMUST00000162807 GeneID:241568 KEGG:mmu:241568
UCSC:uc008lhc.1 InParanoid:Q505E5 ChiTaRS:LRRC4C NextBio:385057
Bgee:Q8C031 CleanEx:MM_LRRC4C Genevestigator:Q8C031
GermOnline:ENSMUSG00000050587 Uniprot:Q8C031
Length = 640
Score = 296 (109.3 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 99/352 (28%), Positives = 160/352 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 128 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 185
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 186 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LIKLDELDLSGNHLSAIRPGSFQGLM 243
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 244 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Query: 207 TCDCLLIGLRRWL-ESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W+ + + A C+ PP L I +L + C P I L
Sbjct: 304 NCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ S ++W+ P N ++ +H Y + L
Sbjct: 364 NVTEGMAAELKCRAST-SLTSVSWI---TP--NGTVM---THGAYKVRIAV-LSDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLIVS 376
N + D G + C+ N G+T+++ T+ NV T P Y V+
Sbjct: 414 TNVTVQDTGMYTCMVSNSVGNTTASATL-------NVTAATTTPFSYFSTVT 458
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V CV K+L V +G+ NT++L+ N ++ +
Sbjct: 35 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQII 91
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ L +L+ + LSR I I+ AF GL NL L+ N L T+P+ F
Sbjct: 92 KVNSFKH--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 209
Query: 184 TTISGSNILPT-GLHGIDLHHN 204
I N+ P L +DL N
Sbjct: 210 REIP--NLTPLIKLDELDLSGN 229
>RGD|1311013 [details] [associations]
symbol:Lrrc4c "leucine rich repeat containing 4C" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0050770 "regulation of axonogenesis" evidence=IEA;ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026878 PROSITE:PS50835 PROSITE:PS51450 RGD:1311013
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:CH473949 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:57689 KO:K07523 OMA:WITPNGS
OrthoDB:EOG4XKV6K PANTHER:PTHR24369:SF8 IPI:IPI00207958
RefSeq:NP_001101223.1 UniGene:Rn.219303 SMR:D3ZXT1
Ensembl:ENSRNOT00000044595 GeneID:311236 KEGG:rno:311236
UCSC:RGD:1311013 NextBio:663237 Uniprot:D3ZXT1
Length = 640
Score = 296 (109.3 bits), Expect = 6.6e-23, P = 6.6e-23
Identities = 99/352 (28%), Positives = 160/352 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F + + +L+++ L R+
Sbjct: 128 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNR--IPSLRRLDLGELKRL 185
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ + L+ +P+ T P L +L LSGN + I+ G+FQ L
Sbjct: 186 SYISEGAFEGLSNLRYLNLAMCNLREIPNLT-P-LIKLDELDLSGNHLSAIRPGSFQGLM 243
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + + I+VIE AF L SL + L +N +T + P L I LHHNPW
Sbjct: 244 HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPW 303
Query: 207 TCDCLLIGLRRWL-ESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L W+ + + A C+ PP L I +L + C P I L
Sbjct: 304 NCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADL 363
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ S ++W+ P N ++ +H Y + L
Sbjct: 364 NVTEGMAAELKCRAST-SLTSVSWI---TP--NGTVM---THGAYKVRIAV-LSDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLIVS 376
N + D G + C+ N G+T+++ T+ NV T P Y V+
Sbjct: 414 TNVTVQDTGMYTCMVSNSVGNTTASATL-------NVTAATTTPFSYFSTVT 458
Score = 216 (81.1 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 64/202 (31%), Positives = 102/202 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V CV K+L V +G+ NT++L+ N ++ +
Sbjct: 35 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICVRKNLREVPDGISTNTRLLNLHENQIQII 91
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ L +L+ + LSR I I+ AF GL NL L+ N L T+P+ F
Sbjct: 92 KVNSFKH--LRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSK 149
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 150 LKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL 209
Query: 184 TTISGSNILPT-GLHGIDLHHN 204
I N+ P L +DL N
Sbjct: 210 REIP--NLTPLIKLDELDLSGN 229
>UNIPROTKB|Q5T0V0 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 Pfam:PF02210
Pfam:PF12661 Pfam:PF01463 EMBL:AL442123 EMBL:AL512424
IPI:IPI00871419 UniGene:Hs.632082 HGNC:HGNC:11085
HOGENOM:HOG000116120 HOVERGEN:HBG057959 ChiTaRS:SLIT1 SMR:Q5T0V0
STRING:Q5T0V0 Ensembl:ENST00000371070 Uniprot:Q5T0V0
Length = 1461
Score = 309 (113.8 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 86/256 (33%), Positives = 123/256 (48%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ L A ++ SACP C C G TV+C L + + + NT+ L+ GNN+
Sbjct: 19 WLLLWAAAWRLGASACPALCTCT---GT-TVDCHGTGLQAIPKNIPRNTERLELNGNNIT 74
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F GL L+ + L +I ++ AF + L L + N L +P F +
Sbjct: 75 RIHKNDFA--GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNN 132
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N I+ I AF+ + L L+L K I IE+ AF L LE L L+NN
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
ITTI S N +P L LH N CDC L L +WL T + + CS P L
Sbjct: 193 ITTIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLSQWLRQRPT-IGLFTQCSGPASLRG 250
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ E +C Q
Sbjct: 251 LNVAEVQKSEFSCSGQ 266
Score = 205 (77.2 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 52/178 (29%), Positives = 93/178 (52%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ LT+L ++ S+N + + F S+ +L L+ N ++
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
I++G F+ L L TL L I I + +F GL ++ L L +N+ITT+S G+ L
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSL 663
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 664 STLNLLANPFNCNCQLAWLGGWLRKRKIVTG-NPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 170 (64.9 bits), Expect = 9.6e-08, Sum P(2) = 9.6e-08
Identities = 63/216 (29%), Positives = 90/216 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L I I AF L +D S+N + + D F SL L L GN I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ G F L L L L+ I I AF L +L L L +NKI +++ T L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF--TSL 428
Query: 197 HGID-LH--HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
I LH NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLRTNPIETS-GARCASPRRLANKRIGQIKSKKFRC 487
Query: 254 ---EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKI 286
E P T ++ N ++C EA +
Sbjct: 488 SAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANV 523
Score = 150 (57.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 49/162 (30%), Positives = 71/162 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLVN 76
CP C C+ VEC + L + E + +T L N + L F+K L +
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK--LTH 566
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI LS ++S I+ AF G ++ +L + N L+++ S F L L L N I
Sbjct: 567 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L I + AF L SL L L
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 139 (54.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 41/137 (29%), Positives = 60/137 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C NK L + +G+ N L GN + Q L
Sbjct: 734 CPQECACL----DTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPG---QLSTFKYL 786
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS +IS + + +F ++ L L S+N LQ +P F SL L+L GN I
Sbjct: 787 QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIST 846
Query: 138 IKTGAFQPLSYLVTLEL 154
++ G F ++ L L +
Sbjct: 847 LQEGIFADVTSLSHLAI 863
Score = 137 (53.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 40/123 (32%), Positives = 56/123 (45%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N VP + L + LS N I + +F +S L TL LS +
Sbjct: 762 NVTELYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
+ I AF GL SL L L N I+T+ G T L + + NP CDC L L W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 219 LES 221
+++
Sbjct: 881 VKT 883
Score = 135 (52.6 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 46/165 (27%), Positives = 70/165 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C G V+C K L + + + N +K++ F
Sbjct: 281 SCPAMCTCS--NG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--K 334
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I LS +I+ I AF+GL +L L N + +P F +L L L+ N I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
I+ AFQ L L L L I+ + F L +++ L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 43 (20.2 bits), Expect = 9.4e-23, Sum P(2) = 9.4e-23
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 493 VNDAESVDKDRRAQGGEDTQDTQDKASEAASVQYSDSGSQCQEWGNVCYNRMQPMQH 549
VN + VD A GG + + +QY G C++ ++C + P QH
Sbjct: 1004 VNTDDCVDH-ACANGGVCVDGVGNYTCQCP-LQYE--GKACEQLVDLCSPDLNPCQH 1056
Score = 42 (19.8 bits), Expect = 1.2e-22, Sum P(2) = 1.2e-22
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 446 NGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQNPDLVNDAE 497
+ G ++ +G ND + G + + + +YPS +I Y E +ND +
Sbjct: 1199 DNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAI-YSAET----INDGQ 1245
Score = 40 (19.1 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 439 ATCMDKVNG-GYIIADGHNDMM 459
A CMD+VN + A+G++ +
Sbjct: 1096 AQCMDEVNSYSCLCAEGYSGQL 1117
>UNIPROTKB|O75093 [details] [associations]
symbol:SLIT1 "Slit homolog 1 protein" species:9606 "Homo
sapiens" [GO:0021510 "spinal cord development" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0040023 "establishment of nucleus localization" evidence=IEA]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IEA]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0005509 "calcium ion binding" evidence=NAS]
[GO:0005615 "extracellular space" evidence=NAS] [GO:0048853
"forebrain morphogenesis" evidence=NAS] [GO:0048846 "axon extension
involved in axon guidance" evidence=IDA] [GO:0050919 "negative
chemotaxis" evidence=IDA] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0007411 "axon guidance" evidence=IDA;TAS] [GO:0005737
"cytoplasm" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
Reactome:REACT_111045 GO:GO:0005615 EMBL:CH471066 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 InterPro:IPR025875 Pfam:PF12799 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
GO:GO:0048853 Pfam:PF01463 EMBL:AL442123 GO:GO:0022028
GO:GO:0050919 GO:GO:0048843 EMBL:AB017167 EMBL:AB011537
EMBL:AL512424 EMBL:BC146851 EMBL:AY029183 IPI:IPI00296434
IPI:IPI00871419 RefSeq:NP_003052.2 UniGene:Hs.632082
ProteinModelPortal:O75093 SMR:O75093 IntAct:O75093
MINT:MINT-2797238 STRING:O75093 PhosphoSite:O75093 PaxDb:O75093
PRIDE:O75093 Ensembl:ENST00000266058 GeneID:6585 KEGG:hsa:6585
UCSC:uc001kmw.2 CTD:6585 GeneCards:GC10M098747 H-InvDB:HIX0079168
H-InvDB:HIX0170440 HGNC:HGNC:11085 HPA:HPA006879 MIM:603742
neXtProt:NX_O75093 PharmGKB:PA35938 HOGENOM:HOG000116120
HOVERGEN:HBG057959 InParanoid:O75093 KO:K06838 OrthoDB:EOG4VDPXM
PhylomeDB:O75093 ChiTaRS:SLIT1 GenomeRNAi:6585 NextBio:25625
ArrayExpress:O75093 Bgee:O75093 CleanEx:HS_SLIT1
Genevestigator:O75093 GermOnline:ENSG00000187122 Uniprot:O75093
Length = 1534
Score = 309 (113.8 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 86/256 (33%), Positives = 123/256 (48%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ L A ++ SACP C C G TV+C L + + + NT+ L+ GNN+
Sbjct: 19 WLLLWAAAWRLGASACPALCTCT---GT-TVDCHGTGLQAIPKNIPRNTERLELNGNNIT 74
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F GL L+ + L +I ++ AF + L L + N L +P F +
Sbjct: 75 RIHKNDFA--GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLHMLPELLFQNN 132
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N I+ I AF+ + L L+L K I IE+ AF L LE L L+NN
Sbjct: 133 QALSRLDLSENAIQAIPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
ITTI S N +P L LH N CDC L L +WL T + + CS P L
Sbjct: 193 ITTIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLSQWLRQRPT-IGLFTQCSGPASLRG 250
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ E +C Q
Sbjct: 251 LNVAEVQKSEFSCSGQ 266
Score = 205 (77.2 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 52/178 (29%), Positives = 93/178 (52%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ LT+L ++ S+N + + F S+ +L L+ N ++
Sbjct: 544 ELRLNNNEISILEATGMFKKLTHLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLES 603
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
I++G F+ L L TL L I I + +F GL ++ L L +N+ITT+S G+ L
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSL 663
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 664 STLNLLANPFNCNCQLAWLGGWLRKRKIVTG-NPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 170 (64.9 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 63/216 (29%), Positives = 90/216 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L I I AF L +D S+N + + D F SL L L GN I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ G F L L L L+ I I AF L +L L L +NKI +++ T L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF--TSL 428
Query: 197 HGID-LH--HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
I LH NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLRTNPIETS-GARCASPRRLANKRIGQIKSKKFRC 487
Query: 254 ---EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKI 286
E P T ++ N ++C EA +
Sbjct: 488 SAKEQYFIPGTEDYQLNSECNSDVVCPHKCRCEANV 523
Score = 150 (57.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 49/162 (30%), Positives = 71/162 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLVN 76
CP C C+ VEC + L + E + +T L N + L F+K L +
Sbjct: 513 CPHKCRCE----ANVVECSSLKLTKIPERIPQSTAELRLNNNEISILEATGMFKK--LTH 566
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI LS ++S I+ AF G ++ +L + N L+++ S F L L L N I
Sbjct: 567 LKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRIS 626
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L I + AF L SL L L
Sbjct: 627 CIHNDSFTGLRNVRLLSLYDNQITTVSPGAFDTLQSLSTLNL 668
Score = 139 (54.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 41/137 (29%), Positives = 60/137 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C NK L + +G+ N L GN + Q L
Sbjct: 734 CPQECACL----DTVVRCSNKHLRALPKGIPKNVTELYLDGNQFTLVPG---QLSTFKYL 786
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS +IS + + +F ++ L L S+N LQ +P F SL L+L GN I
Sbjct: 787 QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDIST 846
Query: 138 IKTGAFQPLSYLVTLEL 154
++ G F ++ L L +
Sbjct: 847 LQEGIFADVTSLSHLAI 863
Score = 137 (53.3 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 40/123 (32%), Positives = 56/123 (45%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N VP + L + LS N I + +F +S L TL LS +
Sbjct: 762 NVTELYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
+ I AF GL SL L L N I+T+ G T L + + NP CDC L L W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDISTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 219 LES 221
+++
Sbjct: 881 VKT 883
Score = 135 (52.6 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 46/165 (27%), Positives = 70/165 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C G V+C K L + + + N +K++ F
Sbjct: 281 SCPAMCTCS--NG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--K 334
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I LS +I+ I AF+GL +L L N + +P F +L L L+ N I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
I+ AFQ L L L L I+ + F L +++ L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 43 (20.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 493 VNDAESVDKDRRAQGGEDTQDTQDKASEAASVQYSDSGSQCQEWGNVCYNRMQPMQH 549
VN + VD A GG + + +QY G C++ ++C + P QH
Sbjct: 1004 VNTDDCVDH-ACANGGVCVDGVGNYTCQCP-LQYE--GKACEQLVDLCSPDLNPCQH 1056
Score = 42 (19.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 446 NGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQNPDLVNDAE 497
+ G ++ +G ND + G + + + +YPS +I Y E +ND +
Sbjct: 1199 DNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAI-YSAET----INDGQ 1245
Score = 40 (19.1 bits), Expect = 2.2e-22, Sum P(2) = 2.2e-22
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 439 ATCMDKVNG-GYIIADGHNDMM 459
A CMD+VN + A+G++ +
Sbjct: 1096 AQCMDEVNSYSCLCAEGYSGQL 1117
>RGD|69307 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007411 "axon guidance" evidence=ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0008045 "motor neuron axon guidance"
evidence=IEA;ISO] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0021772 "olfactory bulb development" evidence=ISO]
[GO:0022028 "tangential migration from the subventricular zone to
the olfactory bulb" evidence=IEA;ISO] [GO:0022029 "telencephalon
cell migration" evidence=ISO] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0033563 "dorsal/ventral axon
guidance" evidence=IEA;ISO] [GO:0040023 "establishment of nucleus
localization" evidence=IEA;ISO] [GO:0043395 "heparan sulfate
proteoglycan binding" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IEA;ISO] [GO:0048812 "neuron projection morphogenesis"
evidence=ISO] [GO:0048843 "negative regulation of axon extension
involved in axon guidance" evidence=IDA] [GO:0048846 "axon extension
involved in axon guidance" evidence=IEA;ISO] [GO:0050919 "negative
chemotaxis" evidence=IEA;ISO] [GO:0051964 "negative regulation of
synapse assembly" evidence=ISS] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 309 (113.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 84/256 (32%), Positives = 124/256 (48%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ L A ++ +ACP C C G TV+C L + + + NT+ L+ GNN+
Sbjct: 19 WLLLWAAAWRLGATACPALCTCT---GT-TVDCHGTGLQAIPKNIPRNTERLELNGNNIT 74
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F GL L+ + L +I ++ AF + L L + N LQ +P F +
Sbjct: 75 RIHKNDFA--GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNN 132
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N ++ + AF+ + L L+L K I IE+ AF L LE L L+NN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
ITTI S N +P L LH N CDC L L +WL T + + CS P L
Sbjct: 193 ITTIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLSQWLRQRPT-IGLFTQCSGPASLRG 250
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ E +C Q
Sbjct: 251 LNVAEVQKSEFSCSGQ 266
Score = 204 (76.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 52/178 (29%), Positives = 93/178 (52%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ L++L ++ S+N + + TF S+ +L L+ N ++
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLES 603
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
+++G F+ L L TL L I I + +F GL ++ L L +N ITTIS G+ L
Sbjct: 604 VRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQAL 663
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 664 STLNLLANPFNCNCQLAWLGDWLRKRKIVTG-NPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 161 (61.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 60/191 (31%), Positives = 80/191 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L I I AF L +D S+N + + D F SL L L GN I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ G F L L L L+ I I AF L +L L L +NKI +++ T L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF--TSL 428
Query: 197 HGID-LH--HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
I LH NP+ CDC L L +L T C+ P RL++ I Q+ + C
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLR-TNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Query: 254 ---EPQITPST 261
E P T
Sbjct: 488 SAKEQYFIPGT 498
Score = 149 (57.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 50/163 (30%), Positives = 71/163 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLV 75
ACP C C+ VEC L + E + +T L N + L F+K+
Sbjct: 512 ACPHKCRCE----ASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS-- 565
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+KI LS ++S I+ F G T++ +L + N L++V S F L L L N I
Sbjct: 566 HLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRI 625
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L I I AF L +L L L
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 145 (56.1 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 44/156 (28%), Positives = 66/156 (42%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N VP + L + LS N I + +F +S L TL LS +
Sbjct: 762 NVTELYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
+ I AF GL SL L L N ++T+ G T L + + NP CDC L L W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 219 LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+++ I C+ PP + + + C+
Sbjct: 881 VKTGYKEPGIAR-CAGPPEMEGKLLLTTPAKKFECQ 915
Score = 138 (53.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 40/137 (29%), Positives = 60/137 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C NK L + +G+ N L GN + Q L
Sbjct: 734 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPG---QLSTFKYL 786
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS +IS + + +F ++ L L S+N LQ +P F SL L+L GN +
Sbjct: 787 QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVST 846
Query: 138 IKTGAFQPLSYLVTLEL 154
++ G F ++ L L +
Sbjct: 847 LQEGIFADVTSLSHLAI 863
Score = 134 (52.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 46/165 (27%), Positives = 70/165 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C G V+C K L + + + N +K++ F
Sbjct: 281 SCPAMCSCS--NG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--K 334
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I LS +I+ I AF+GL +L L N + +P F +L L L+ N I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
I+ AFQ L L L L I+ + F L +++ L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 42 (19.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 446 NGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQNPDLVNDAE 497
+ G ++ +G ND + G + + + +YPS +I Y E +ND +
Sbjct: 1196 DNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAI-YSAET----INDGQ 1242
Score = 39 (18.8 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 524 VQYSDSGSQCQEWGNVCYNRMQPMQH 549
+QY+ G C++ + C + P QH
Sbjct: 1033 LQYT--GRACEQLVDFCSPDLNPCQH 1056
>UNIPROTKB|O88279 [details] [associations]
symbol:Slit1 "Slit homolog 1 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69307 GO:GO:0005737 GO:GO:0005615
GO:GO:0007420 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186
GO:GO:0043395 InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0040023 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 Pfam:PF12661 GO:GO:0033563 GO:GO:0051964
Pfam:PF01463 GO:GO:0022028 GO:GO:0050919 GO:GO:0048843 CTD:6585
HOGENOM:HOG000116120 HOVERGEN:HBG057959 KO:K06838 OrthoDB:EOG4VDPXM
EMBL:AB011530 EMBL:AF133730 EMBL:AB073213 EMBL:AB073214
EMBL:AB073215 EMBL:AB017170 IPI:IPI00389760 IPI:IPI00409983
IPI:IPI00409984 IPI:IPI00409985 PIR:T42218 RefSeq:NP_075242.1
UniGene:Rn.30002 ProteinModelPortal:O88279 SMR:O88279 STRING:O88279
PRIDE:O88279 GeneID:65047 KEGG:rno:65047 UCSC:RGD:69307
InParanoid:O88279 NextBio:613884 ArrayExpress:O88279
Genevestigator:O88279 GermOnline:ENSRNOG00000026065 Uniprot:O88279
Length = 1531
Score = 309 (113.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 84/256 (32%), Positives = 124/256 (48%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ L A ++ +ACP C C G TV+C L + + + NT+ L+ GNN+
Sbjct: 19 WLLLWAAAWRLGATACPALCTCT---GT-TVDCHGTGLQAIPKNIPRNTERLELNGNNIT 74
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F GL L+ + L +I ++ AF + L L + N LQ +P F +
Sbjct: 75 RIHKNDFA--GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNN 132
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N ++ + AF+ + L L+L K I IE+ AF L LE L L+NN
Sbjct: 133 QALSRLDLSENSLQAVPRKAFRGATDLKNLQLDKNQISCIEEGAFRALRGLEVLTLNNNN 192
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
ITTI S N +P L LH N CDC L L +WL T + + CS P L
Sbjct: 193 ITTIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLSQWLRQRPT-IGLFTQCSGPASLRG 250
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ E +C Q
Sbjct: 251 LNVAEVQKSEFSCSGQ 266
Score = 204 (76.9 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 52/178 (29%), Positives = 93/178 (52%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ L++L ++ S+N + + TF S+ +L L+ N ++
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLES 603
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
+++G F+ L L TL L I I + +F GL ++ L L +N ITTIS G+ L
Sbjct: 604 VRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQAL 663
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 664 STLNLLANPFNCNCQLAWLGDWLRKRKIVTG-NPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 161 (61.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 60/191 (31%), Positives = 80/191 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L I I AF L +D S+N + + D F SL L L GN I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ G F L L L L+ I I AF L +L L L +NKI +++ T L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF--TSL 428
Query: 197 HGID-LH--HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
I LH NP+ CDC L L +L T C+ P RL++ I Q+ + C
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLR-TNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Query: 254 ---EPQITPST 261
E P T
Sbjct: 488 SAKEQYFIPGT 498
Score = 149 (57.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 50/163 (30%), Positives = 71/163 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLV 75
ACP C C+ VEC L + E + +T L N + L F+K+
Sbjct: 512 ACPHKCRCE----ASVVECSGLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS-- 565
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+KI LS ++S I+ F G T++ +L + N L++V S F L L L N I
Sbjct: 566 HLKKINLSNNKVSEIEDGTFEGATSVSELHLTANQLESVRSGMFRGLDGLRTLMLRNNRI 625
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L I I AF L +L L L
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 145 (56.1 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 44/156 (28%), Positives = 66/156 (42%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N VP + L + LS N I + +F +S L TL LS +
Sbjct: 762 NVTELYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
+ I AF GL SL L L N ++T+ G T L + + NP CDC L L W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCHLRWLSSW 880
Query: 219 LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+++ I C+ PP + + + C+
Sbjct: 881 VKTGYKEPGIAR-CAGPPEMEGKLLLTTPAKKFECQ 915
Score = 138 (53.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 40/137 (29%), Positives = 60/137 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C NK L + +G+ N L GN + Q L
Sbjct: 734 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPG---QLSTFKYL 786
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS +IS + + +F ++ L L S+N LQ +P F SL L+L GN +
Sbjct: 787 QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVST 846
Query: 138 IKTGAFQPLSYLVTLEL 154
++ G F ++ L L +
Sbjct: 847 LQEGIFADVTSLSHLAI 863
Score = 134 (52.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 46/165 (27%), Positives = 70/165 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C G V+C K L + + + N +K++ F
Sbjct: 281 SCPAMCSCS--NG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--K 334
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I LS +I+ I AF+GL +L L N + +P F +L L L+ N I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
I+ AFQ L L L L I+ + F L +++ L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 42 (19.8 bits), Expect = 1.4e-22, Sum P(2) = 1.4e-22
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 446 NGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQNPDLVNDAE 497
+ G ++ +G ND + G + + + +YPS +I Y E +ND +
Sbjct: 1196 DNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAI-YSAET----INDGQ 1242
Score = 39 (18.8 bits), Expect = 2.8e-22, Sum P(2) = 2.8e-22
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 524 VQYSDSGSQCQEWGNVCYNRMQPMQH 549
+QY+ G C++ + C + P QH
Sbjct: 1033 LQYT--GRACEQLVDFCSPDLNPCQH 1056
>MGI|MGI:1315203 [details] [associations]
symbol:Slit1 "slit homolog 1 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0021772 "olfactory
bulb development" evidence=IGI] [GO:0022028 "tangential migration
from the subventricular zone to the olfactory bulb" evidence=IMP]
[GO:0022029 "telencephalon cell migration" evidence=IGI]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI] [GO:0040023
"establishment of nucleus localization" evidence=IDA] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO;IPI] [GO:0048812 "neuron
projection morphogenesis" evidence=IGI] [GO:0048843 "negative
regulation of axon extension involved in axon guidance"
evidence=ISO] [GO:0048846 "axon extension involved in axon
guidance" evidence=ISO] [GO:0050919 "negative chemotaxis"
evidence=ISO;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 MGI:MGI:1315203
GO:GO:0005737 GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005102
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0008045 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0040023 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
Pfam:PF12661 GO:GO:0033563 GO:GO:0051964 Pfam:PF01463
GeneTree:ENSGT00700000104083 GO:GO:0022028 GO:GO:0050919
GO:GO:0048843 CTD:6585 HOGENOM:HOG000116120 HOVERGEN:HBG057959
KO:K06838 OrthoDB:EOG4VDPXM EMBL:AF144627 EMBL:AK122376
EMBL:BC057131 EMBL:BC062091 IPI:IPI00330211 RefSeq:NP_056563.2
UniGene:Mm.40322 ProteinModelPortal:Q80TR4 SMR:Q80TR4 STRING:Q80TR4
PhosphoSite:Q80TR4 PRIDE:Q80TR4 Ensembl:ENSMUST00000025993
GeneID:20562 KEGG:mmu:20562 UCSC:uc008hmf.2 InParanoid:Q80TR4
OMA:KCVHGKC NextBio:298853 Bgee:Q80TR4 CleanEx:MM_SLIT1
Genevestigator:Q80TR4 GermOnline:ENSMUSG00000025020 Uniprot:Q80TR4
Length = 1531
Score = 305 (112.4 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 84/256 (32%), Positives = 124/256 (48%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W+ L A ++ +ACP C C G TV+C L + + + NT+ L+ GNN+
Sbjct: 19 WLLLWAAAWRLGATACPALCTCT---GT-TVDCHGTGLQAIPKNIPRNTERLELNGNNIT 74
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+H F GL L+ + L +I ++ AF + L L + N LQ +P F +
Sbjct: 75 RIHKNDFA--GLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQLQVLPELLFQNN 132
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+L +L LS N ++ + AF+ + L L+L K I IE+ AF L LE L L+NN
Sbjct: 133 QALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRALRGLEVLTLNNNN 192
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
ITTI S N +P L LH N CDC L L +WL T + + CS P L
Sbjct: 193 ITTIPVSSFNHMPK-LRTFRLHSNHLFCDCHLAWLSQWLRQRPT-IGLFTQCSGPASLRG 250
Query: 241 VTIKQLSIDELACEPQ 256
+ + ++ E +C Q
Sbjct: 251 LNVAEVQKGEFSCSGQ 266
Score = 203 (76.5 bits), Expect = 4.1e-11, Sum P(2) = 4.1e-11
Identities = 53/178 (29%), Positives = 93/178 (52%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ IS++++ F+ L++L ++ S+N + + TF S+ +L L+ N ++
Sbjct: 544 ELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLES 603
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
I++G F+ L L TL L I I + +F GL ++ L L +N ITTIS G+ L
Sbjct: 604 IRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQAL 663
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K +P C P L + ++ ++ + CE
Sbjct: 664 STLNLLANPFNCNCHLSWLGDWLRKRKIVTG-NPRCQNPDFLRQIPLQDVAFPDFRCE 720
Score = 161 (61.7 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 60/191 (31%), Positives = 80/191 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L I I AF L +D S+N + + D F SL L L GN I
Sbjct: 311 MTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKIT 370
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ G F L L L L+ I I AF L +L L L +NKI +++ T L
Sbjct: 371 DLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSLAKGTF--TSL 428
Query: 197 HGID-LH--HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
I LH NP+ CDC L L +L T C+ P RL++ I Q+ + C
Sbjct: 429 RAIQTLHLAQNPFICDCNLKWLADFLR-TNPIETTGARCASPRRLANKRIGQIKSKKFRC 487
Query: 254 ---EPQITPST 261
E P T
Sbjct: 488 SAKEQYFIPGT 498
Score = 146 (56.5 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 44/156 (28%), Positives = 66/156 (42%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N VP + L + LS N I + +F +S L TL LS +
Sbjct: 762 NVTELYLDGNQFTLVPGQ-LSTFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNAL 820
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
+ I AF GL SL L L N ++T+ G T L + + NP CDC L L W
Sbjct: 821 QCIPPLAFQGLRSLRLLSLHGNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSW 880
Query: 219 LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+++ I C+ PP + + + C+
Sbjct: 881 VKTGYKEPGIAR-CAGPPEMEGKLLLTTPAKKFECQ 915
Score = 144 (55.7 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 48/163 (29%), Positives = 71/163 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLV 75
ACP C C+ VEC + L + E + +T L N + L F+K+
Sbjct: 512 ACPHKCRCE----ASVVECSSLKLSKIPERIPQSTTELRLNNNEISILEATGLFKKLS-- 565
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+KI LS ++S I+ F G ++ +L + N L+++ S F L L L N I
Sbjct: 566 HLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQLESIRSGMFRGLDGLRTLMLRNNRI 625
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L I I AF L +L L L
Sbjct: 626 SCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTLQALSTLNL 668
Score = 138 (53.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 40/137 (29%), Positives = 60/137 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C NK L + +G+ N L GN + Q L
Sbjct: 734 CPQECACL----DTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPG---QLSTFKYL 786
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS +IS + + +F ++ L L S+N LQ +P F SL L+L GN +
Sbjct: 787 QLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLHGNDVST 846
Query: 138 IKTGAFQPLSYLVTLEL 154
++ G F ++ L L +
Sbjct: 847 LQEGIFADVTSLSHLAI 863
Score = 134 (52.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 46/165 (27%), Positives = 70/165 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C G V+C K L + + + N +K++ F
Sbjct: 281 SCPAMCSCS--SG--IVDCRGKGLTAIPANLPETMTEIRLELNGIKSIPPGAFSPYR--K 334
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I LS +I+ I AF+GL +L L N + +P F +L L L+ N I
Sbjct: 335 LRRIDLSNNQIAEIAPDAFQGLRSLNSLVLYGNKITDLPRGVFGGLYTLQLLLLNANKIN 394
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
I+ AFQ L L L L I+ + F L +++ L L N
Sbjct: 395 CIRPDAFQDLQNLSLLSLYDNKIQSLAKGTFTSLRAIQTLHLAQN 439
Score = 42 (19.8 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 524 VQYSDSGSQCQEWGNVCYNRMQPMQH 549
+QY+ G C++ + C M P QH
Sbjct: 1033 LQYT--GRACEQLVDFCSPDMNPCQH 1056
Score = 42 (19.8 bits), Expect = 3.7e-22, Sum P(2) = 3.7e-22
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 446 NGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQNPDLVNDAE 497
+ G ++ +G ND + G + + + +YPS +I Y E +ND +
Sbjct: 1196 DNGILLYNGDNDHIAVELYQGHVRVSYDPGSYPSSAI-YSAET----INDGQ 1242
>ZFIN|ZDB-GENE-010306-4 [details] [associations]
symbol:slit3 "slit (Drosophila) homolog 3"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-010306-4 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0030517 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 Pfam:PF02210
Pfam:PF12661 InterPro:IPR026906 Pfam:PF13306 Pfam:PF01463
GeneTree:ENSGT00700000104083 EMBL:AL928691 EMBL:BX323583
IPI:IPI00502606 Ensembl:ENSDART00000146299 ArrayExpress:F1RCV3
Bgee:F1RCV3 Uniprot:F1RCV3
Length = 1516
Score = 293 (108.2 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 83/256 (32%), Positives = 121/256 (47%)
Query: 3 YW--IFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGN 59
YW + ++ ++ V+ CP C C G V+C ++ TV G+ N + LD N
Sbjct: 7 YWGTVAVLCGLLSCAVNGCPHKCSCS---GSH-VDCQGQAFKTVPRGIPRNAERLDLDRN 62
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
N+ + F GL NL+ ++L +ISVI+ AF GL L + + N LQ +P F
Sbjct: 63 NITRITKVDFS--GLKNLRVLHLENNQISVIERGAFEGLKQLERIRLNRNRLQVLPELLF 120
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L +L LS N I+ + AF+ ++ + L+L I IED AF L LE L L+
Sbjct: 121 QSTTKLSRLDLSENQIQAVPRKAFRGITTVKNLQLDSNHISCIEDGAFRALRDLEILTLN 180
Query: 180 NNKITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPR 237
NN IT I S N +P L + LH N CDC L L WL + +A C P
Sbjct: 181 NNNITLIPLSSFNHMPK-LRTLRLHSNNLHCDCHLSWLSDWLRQRRG-LAPFTQCMAPAH 238
Query: 238 LSSVTIKQLSIDELAC 253
+ + + + E C
Sbjct: 239 MRGLNVPDVQKREFVC 254
Score = 222 (83.2 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 55/171 (32%), Positives = 98/171 (57%)
Query: 87 ISVIDSK-AFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
IS++++ AF+ L NL ++ S+N L+ + F +++L L+GN ++ + F+
Sbjct: 536 ISILEATGAFKKLPNLRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKG 595
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GS-NILPTGLHGIDLHH 203
L L TL L I +++A F GL S+ L L +N+I+TI+ G+ N L + L I+L
Sbjct: 596 LIGLKTLMLRSNQISCVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHS-LSTINLLS 654
Query: 204 NPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
NP+ CDC L L WL+ T+ ++ +P C P L + I+ +++ + +C+
Sbjct: 655 NPYVCDCHLAWLGLWLKKTRV-VSGNPRCQKPAFLKEIPIQDVAMPDFSCD 704
Score = 169 (64.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 55/176 (31%), Positives = 76/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 303 EIRLEQNMIKNIPAGAFSTYKKLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEI 362
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 363 PKGLFDGLVSLQLLLLNANKINCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIK 422
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L + CS P RL++ I Q+ + C
Sbjct: 423 TLHLAQNPFMCDCHLKWLADYLFDNPIETS-GARCSHPRRLANKRISQVKGKKFRC 477
Score = 148 (57.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 48/154 (31%), Positives = 73/154 (47%)
Query: 103 DLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVI 162
+L N+L +VP + P+ L L LS N I + F ++ L TL LS I +
Sbjct: 749 ELYLEGNLLTSVPKE-LPNLKQLTLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCV 807
Query: 163 EDAAFVGLDSLEWLKLDNNKITTI-SGS-NILPTGLHGIDLHHNPWTCDCLLIGLRRWLE 220
AF GL SL L L N ++T+ G+ N L T L + L NP CDC L L +W++
Sbjct: 808 PVHAFDGLRSLRLLTLHGNDLSTVPEGAFNHL-TSLSHLALGANPLYCDCELRWLSQWVK 866
Query: 221 STKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+ I C+ PP ++ + ++ C+
Sbjct: 867 AGFKEPGIAR-CTGPPDMADRLLLTTPLNRFQCK 899
Score = 142 (55.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 45/167 (26%), Positives = 69/167 (41%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
V+ CP +C C V+C K L + + + N +K + F
Sbjct: 269 VTICPAACTCN----NNIVDCRRKGLTEIPANLPEGIVEIRLEQNMIKNIPAGAFSTYK- 323
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
L++I LS+ +IS I AF GL +L L N + +P F SL L L+ N
Sbjct: 324 -KLKRIDLSKNQISEIAEDAFSGLRSLTSLVLYGNKIAEIPKGLFDGLVSLQLLLLNANK 382
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
I ++ F+ L L L L ++ I F L +++ L L N
Sbjct: 383 INCLRVNTFKDLQNLNLLSLYDNKLQTISKGLFAPLRAIKTLHLAQN 429
Score = 140 (54.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 44/137 (32%), Positives = 62/137 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP SC C + V C N+ L ++ + + +T L GN L ++ E L L
Sbjct: 718 CPESCTCS----ETVVRCSNRGLRSLPKTIPKDTTELYLEGNLLTSVPKEL---PNLKQL 770
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ LS IS + F +T L L S+N ++ VP F SL LTL GN +
Sbjct: 771 TLLDLSNNSISHLAPLTFSNMTQLATLILSYNQIRCVPVHAFDGLRSLRLLTLHGNDLST 830
Query: 138 IKTGAFQPLSYLVTLEL 154
+ GAF L+ L L L
Sbjct: 831 VPEGAFNHLTSLSHLAL 847
Score = 136 (52.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 51/165 (30%), Positives = 70/165 (42%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLVN 76
CP C C+ G V+C N L + + +T L N + L F+K L N
Sbjct: 497 CPERCRCE--G--TVVDCSNLKLTKIPPHLPEHTTDLRLNDNEISILEATGAFKK--LPN 550
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI LS ++ I AF G +++L + N LQ+V F L L L N I
Sbjct: 551 LRKINLSNNKLRDIREGAFDGAGGVLELLLTGNKLQSVSGRMFKGLIGLKTLMLRSNQIS 610
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 611 CVDNATFTGLSSVRLLSLYDNRISTIAPGAFNTLHSLSTINLLSN 655
>RGD|69311 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0007411 "axon guidance" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA;ISO] [GO:0009887
"organ morphogenesis" evidence=IEA;ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0021510 "spinal cord development"
evidence=IEP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA;ISO]
[GO:0032870 "cellular response to hormone stimulus"
evidence=IEA;ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA;ISO] [GO:0048495 "Roundabout binding" evidence=IEA;ISO]
[GO:0048846 "axon extension involved in axon guidance"
evidence=IEA;ISO] [GO:0050919 "negative chemotaxis"
evidence=IEA;ISO] [GO:0051414 "response to cortisol stimulus"
evidence=IEA;ISO] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA;ISO] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA;ISO] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0021834 "chemorepulsion involved
in embryonic olfactory bulb interneuron precursor migration"
evidence=ISO] InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 RGD:69311 GO:GO:0008285 GO:GO:0005615
GO:GO:0007420 GO:GO:0016020 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 80/240 (33%), Positives = 115/240 (47%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ACPT C C +V+C L V G+ N + LD NN+ + F GL
Sbjct: 32 AACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFT--GLK 85
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
NL+ ++L ++SVI+ AF+ L L L + N LQ +P F P L +L LS N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI--SGSNILP 193
+ I AF+ ++ + L+L I IED AF L LE L L+NN I+ I + N +P
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ + LH N CDC L L WL +T + +C P L ++ + E C
Sbjct: 206 K-IRTLRLHSNHLYCDCHLAWLSDWLRQRRT-IGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 208 (78.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 54/170 (31%), Positives = 90/170 (52%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
I+V+++ F+ L NL ++ S+N ++ V F + +L L+GN ++ + F+
Sbjct: 544 IAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRG 603
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTIS G+ L I+L N
Sbjct: 604 LSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C + L RWL + ++ +P C P L + I+ ++I + CE
Sbjct: 664 PFNCNCHMAWLGRWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCE 712
Score = 179 (68.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 55/176 (31%), Positives = 77/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 311 EIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 371 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 431 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 485
Score = 159 (61.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 51/163 (31%), Positives = 78/163 (47%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNE--KFQKMGLV 75
CP C C + V C N+ L T+ +GM + L GN+L + E F+++ L+
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLI 780
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L S IS++ + F +++L L S+N L+ +P F SL LTL GN I
Sbjct: 781 DL-----SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIE-DAAFVGLDSLEWLK 177
+ G+F L+ L L L GI + D + L EW+K
Sbjct: 836 SSVPEGSFNDLTSLSHLAL---GINPLHCDCSLRWLS--EWIK 873
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP++C C V+C K L + + + N++K++ F +
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF--IQYKK 332
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + +P F SL L L+ N I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L S++ L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 138 (53.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 50/164 (30%), Positives = 68/164 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L + + T L N++ L K L NL
Sbjct: 505 CPEKCRCE--G--TIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKK-LPNL 559
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS RI + AF G + +L + N L+T+ F L L L N I
Sbjct: 560 RKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISC 619
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 620 VNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 135 (52.6 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 47/142 (33%), Positives = 66/142 (46%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
++ +L N L VP + + L + LS N I + F +S+L TL LS +
Sbjct: 753 DVTELYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTI-SGS-NILPTGLHGIDLHHNPWTCDCLLIGLRR 217
I AF GL SL L L N I+++ GS N L T L + L NP CDC L L
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL-TSLSHLALGINPLHCDCSLRWLSE 870
Query: 218 WLESTKTPMAIDPICSVPPRLS 239
W+++ I CS P ++
Sbjct: 871 WIKAGYKEPGIAR-CSSPESMA 891
>UNIPROTKB|O88280 [details] [associations]
symbol:Slit3 "Slit homolog 3 protein" species:10116 "Rattus
norvegicus" [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
RGD:69311 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420 GO:GO:0016020
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 EMBL:AB011531 IPI:IPI00207574
PIR:T13953 RefSeq:NP_112611.1 UniGene:Rn.12298
ProteinModelPortal:O88280 SMR:O88280 IntAct:O88280 STRING:O88280
PRIDE:O88280 GeneID:83467 KEGG:rno:83467 UCSC:RGD:69311
InParanoid:O88280 NextBio:615863 ArrayExpress:O88280
Genevestigator:O88280 GermOnline:ENSRNOG00000007377 Uniprot:O88280
Length = 1523
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 80/240 (33%), Positives = 115/240 (47%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ACPT C C +V+C L V G+ N + LD NN+ + F GL
Sbjct: 32 AACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFT--GLK 85
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
NL+ ++L ++SVI+ AF+ L L L + N LQ +P F P L +L LS N I
Sbjct: 86 NLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI--SGSNILP 193
+ I AF+ ++ + L+L I IED AF L LE L L+NN I+ I + N +P
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ + LH N CDC L L WL +T + +C P L ++ + E C
Sbjct: 206 K-IRTLRLHSNHLYCDCHLAWLSDWLRQRRT-IGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 208 (78.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 54/170 (31%), Positives = 90/170 (52%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
I+V+++ F+ L NL ++ S+N ++ V F + +L L+GN ++ + F+
Sbjct: 544 IAVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRG 603
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTIS G+ L I+L N
Sbjct: 604 LSGLKTLMLRSNLISCVNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C + L RWL + ++ +P C P L + I+ ++I + CE
Sbjct: 664 PFNCNCHMAWLGRWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCE 712
Score = 179 (68.1 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 55/176 (31%), Positives = 77/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 311 EIRLEQNSIKSIPAGAFIQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 371 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 431 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 485
Score = 159 (61.0 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 51/163 (31%), Positives = 78/163 (47%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNE--KFQKMGLV 75
CP C C + V C N+ L T+ +GM + L GN+L + E F+++ L+
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHTLPKGMPKDVTELYLEGNHLTAVPKELSTFRQLTLI 780
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L S IS++ + F +++L L S+N L+ +P F SL LTL GN I
Sbjct: 781 DL-----SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIE-DAAFVGLDSLEWLK 177
+ G+F L+ L L L GI + D + L EW+K
Sbjct: 836 SSVPEGSFNDLTSLSHLAL---GINPLHCDCSLRWLS--EWIK 873
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 45/165 (27%), Positives = 73/165 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP++C C V+C K L + + + N++K++ F +
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAF--IQYKK 332
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + +P F SL L L+ N I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L S++ L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 138 (53.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 50/164 (30%), Positives = 68/164 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L + + T L N++ L K L NL
Sbjct: 505 CPEKCRCE--G--TIVDCSNQKLSRIPSHLPEYTTDLRLNDNDIAVLEATGIFKK-LPNL 559
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS RI + AF G + +L + N L+T+ F L L L N I
Sbjct: 560 RKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSGLKTLMLRSNLISC 619
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 620 VNNDTFAGLSSVRLLSLYDNRITTISPGAFTTLVSLSTINLLSN 663
Score = 135 (52.6 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 47/142 (33%), Positives = 66/142 (46%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
++ +L N L VP + + L + LS N I + F +S+L TL LS +
Sbjct: 753 DVTELYLEGNHLTAVPKE-LSTFRQLTLIDLSNNSISMLTNHTFSNMSHLSTLILSYNRL 811
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTI-SGS-NILPTGLHGIDLHHNPWTCDCLLIGLRR 217
I AF GL SL L L N I+++ GS N L T L + L NP CDC L L
Sbjct: 812 RCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL-TSLSHLALGINPLHCDCSLRWLSE 870
Query: 218 WLESTKTPMAIDPICSVPPRLS 239
W+++ I CS P ++
Sbjct: 871 WIKAGYKEPGIAR-CSSPESMA 891
>UNIPROTKB|O75094 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=NAS] [GO:0005739
"mitochondrion" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0050919 "negative chemotaxis"
evidence=IDA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEP] [GO:0032870 "cellular response to hormone
stimulus" evidence=IEP] [GO:0051414 "response to cortisol stimulus"
evidence=IEP] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=IDA] [GO:0007411 "axon
guidance" evidence=IDA;TAS] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0035385
"Roundabout signaling pathway" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005739
Reactome:REACT_111045 GO:GO:0008285 GO:GO:0005615 GO:GO:0007420
GO:GO:0030308 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T EMBL:AB017169 EMBL:AB011538 EMBL:AY358884
EMBL:AC008409 EMBL:AC008479 EMBL:AC011365 EMBL:AC011389
EMBL:AC027311 EMBL:AC094081 EMBL:AC112165 EMBL:BC146759
EMBL:AL122074 EMBL:AF075240 IPI:IPI00409709 IPI:IPI00409710
IPI:IPI00983148 PIR:T34555 RefSeq:NP_003053.1 UniGene:Hs.604116
ProteinModelPortal:O75094 SMR:O75094 IntAct:O75094
MINT:MINT-2797284 STRING:O75094 PhosphoSite:O75094 PaxDb:O75094
PRIDE:O75094 Ensembl:ENST00000404867 Ensembl:ENST00000519560
GeneID:6586 KEGG:hsa:6586 UCSC:uc003mab.3 CTD:6586
GeneCards:GC05M168021 H-InvDB:HIX0005394 HGNC:HGNC:11087
HPA:HPA051630 MIM:603745 neXtProt:NX_O75094 PharmGKB:PA35940
InParanoid:O75094 KO:K06850 PhylomeDB:O75094 ChiTaRS:SLIT3
GenomeRNAi:6586 NextBio:25629 Bgee:O75094 CleanEx:HS_SLIT3
Genevestigator:O75094 GermOnline:ENSG00000184347 Uniprot:O75094
Length = 1523
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 82/246 (33%), Positives = 115/246 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACPT C C +V+C L V G+ N + LD NN+ + F GL N
Sbjct: 33 ACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFA--GLKN 86
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ ++L ++SVI+ AF+ L L L + N LQ +P F P L +L LS N I+
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI--SGSNILPT 194
I AF+ ++ + L+L I IED AF L LE L L+NN I+ I + N +P
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+ + LH N CDC L L WL +T + +C P L + + E C
Sbjct: 207 -IRTLRLHSNHLYCDCHLAWLSDWLRQRRT-VGQFTLCMAPVHLRGFNVADVQKKEYVCP 264
Query: 255 -PQITP 259
P P
Sbjct: 265 APHSEP 270
Score = 209 (78.6 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 53/170 (31%), Positives = 91/170 (53%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
+SV+++ F+ L NL ++ S+N ++ V F S+ +L L+GN ++ + F+
Sbjct: 544 VSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRG 603
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTI+ G+ L I+L N
Sbjct: 604 LSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C L L +WL + ++ +P C P L + I+ ++I + C+
Sbjct: 664 PFNCNCHLAWLGKWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCD 712
Score = 182 (69.1 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 55/176 (31%), Positives = 77/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 311 EIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 371 VKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 431 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 485
Score = 152 (58.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/160 (31%), Positives = 71/160 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V C NK L + GM + L GN+L + E L +L
Sbjct: 725 CPEQCTCM----ETVVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPREL---SALRHL 777
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
I LS IS++ + F +++L L S+N L+ +P F SL LTL GN I
Sbjct: 778 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
+ G+F L+ L L L + D + L EW+K
Sbjct: 838 VPEGSFNDLTSLSHLALGTNPLHC--DCSLRWLS--EWVK 873
Score = 143 (55.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP+ C C V+C K L+ + + + N++K + F +
Sbjct: 279 SCPSPCTCS----NNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYK--K 332
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + + F SL L L+ N I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKIN 392
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L S++ L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 136 (52.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 49/164 (29%), Positives = 68/164 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L+ + + L N + L K L NL
Sbjct: 505 CPEKCRCE--G--TIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKK-LPNL 559
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS +I + AF G ++ +L + N L+TV F L L L N I
Sbjct: 560 RKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGC 619
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 620 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 129 (50.5 bits), Expect = 0.00033, P = 0.00033
Identities = 49/143 (34%), Positives = 66/143 (46%)
Query: 96 RGLT-NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLEL 154
RG+ ++ +L N L VP + L + LS N I + F +S+L TL L
Sbjct: 748 RGMPKDVTELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLIL 806
Query: 155 SKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGS-NILPTGLHGIDLHHNPWTCDCLL 212
S + I AF GL SL L L N I+++ GS N L T L + L NP CDC L
Sbjct: 807 SYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL-TSLSHLALGTNPLHCDCSL 865
Query: 213 IGLRRWLESTKTPMAIDPICSVP 235
L W+++ I CS P
Sbjct: 866 RWLSEWVKAGYKEPGIAR-CSSP 887
>UNIPROTKB|J3KNP3 [details] [associations]
symbol:SLIT3 "Slit homolog 3 protein" species:9606 "Homo
sapiens" [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 EMBL:AC008409
EMBL:AC008479 EMBL:AC011365 EMBL:AC011389 EMBL:AC027311
EMBL:AC094081 EMBL:AC112165 HGNC:HGNC:11087 ChiTaRS:SLIT3
OMA:SVDCHGL ProteinModelPortal:J3KNP3 Ensembl:ENST00000332966
Uniprot:J3KNP3
Length = 1530
Score = 289 (106.8 bits), Expect = 1.8e-21, P = 1.8e-21
Identities = 82/246 (33%), Positives = 115/246 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACPT C C +V+C L V G+ N + LD NN+ + F GL N
Sbjct: 33 ACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFA--GLKN 86
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ ++L ++SVI+ AF+ L L L + N LQ +P F P L +L LS N I+
Sbjct: 87 LRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQIQ 146
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI--SGSNILPT 194
I AF+ ++ + L+L I IED AF L LE L L+NN I+ I + N +P
Sbjct: 147 GIPRKAFRGITDVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMPK 206
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+ + LH N CDC L L WL +T + +C P L + + E C
Sbjct: 207 -IRTLRLHSNHLYCDCHLAWLSDWLRQRRT-VGQFTLCMAPVHLRGFNVADVQKKEYVCP 264
Query: 255 -PQITP 259
P P
Sbjct: 265 APHSEP 270
Score = 209 (78.6 bits), Expect = 8.1e-13, P = 8.1e-13
Identities = 53/170 (31%), Positives = 91/170 (53%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
+SV+++ F+ L NL ++ S+N ++ V F S+ +L L+GN ++ + F+
Sbjct: 544 VSVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRG 603
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTI+ G+ L I+L N
Sbjct: 604 LSGLKTLMLRSNLIGCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C L L +WL + ++ +P C P L + I+ ++I + C+
Sbjct: 664 PFNCNCHLAWLGKWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCD 712
Score = 182 (69.1 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 55/176 (31%), Positives = 77/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 311 EIRLEQNSIKAIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 371 VKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQ 430
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 431 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 485
Score = 152 (58.6 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 50/160 (31%), Positives = 71/160 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V C NK L + GM + L GN+L + E L +L
Sbjct: 725 CPEQCTCM----ETVVRCSNKGLRALPRGMPKDVTELYLEGNHLTAVPREL---SALRHL 777
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
I LS IS++ + F +++L L S+N L+ +P F SL LTL GN I
Sbjct: 778 TLIDLSNNSISMLTNYTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISS 837
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
+ G+F L+ L L L + D + L EW+K
Sbjct: 838 VPEGSFNDLTSLSHLALGTNPLHC--DCSLRWLS--EWVK 873
Score = 143 (55.4 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 44/165 (26%), Positives = 71/165 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP+ C C V+C K L+ + + + N++K + F +
Sbjct: 279 SCPSPCTCS----NNIVDCRGKGLMEIPANLPEGIVEIRLEQNSIKAIPAGAFTQYK--K 332
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + + F SL L L+ N I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIVKGLFDGLVSLQLLLLNANKIN 392
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L S++ L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQSIQTLHLAQN 437
Score = 136 (52.9 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 49/164 (29%), Positives = 68/164 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L+ + + L N + L K L NL
Sbjct: 505 CPEKCRCE--G--TIVDCSNQKLVRIPSHLPEYVTDLRLNDNEVSVLEATGIFKK-LPNL 559
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS +I + AF G ++ +L + N L+TV F L L L N I
Sbjct: 560 RKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRVFRGLSGLKTLMLRSNLIGC 619
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 620 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 129 (50.5 bits), Expect = 0.00033, P = 0.00033
Identities = 49/143 (34%), Positives = 66/143 (46%)
Query: 96 RGLT-NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLEL 154
RG+ ++ +L N L VP + L + LS N I + F +S+L TL L
Sbjct: 748 RGMPKDVTELYLEGNHLTAVPRE-LSALRHLTLIDLSNNSISMLTNYTFSNMSHLSTLIL 806
Query: 155 SKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGS-NILPTGLHGIDLHHNPWTCDCLL 212
S + I AF GL SL L L N I+++ GS N L T L + L NP CDC L
Sbjct: 807 SYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFNDL-TSLSHLALGTNPLHCDCSL 865
Query: 213 IGLRRWLESTKTPMAIDPICSVP 235
L W+++ I CS P
Sbjct: 866 RWLSEWVKAGYKEPGIAR-CSSP 887
>UNIPROTKB|E1B8X9 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:HHRGPAL EMBL:DAAA02033829 EMBL:DAAA02033830 IPI:IPI00697816
Ensembl:ENSBTAT00000013364 Uniprot:E1B8X9
Length = 901
Score = 277 (102.6 bits), Expect = 1.6e-20, P = 1.6e-20
Identities = 73/244 (29%), Positives = 118/244 (48%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKM 72
CPT+C C + V C + + ++ E + P N + + T N + + F +
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAE-LQPKPYNPKKMYLTENYIALVRRSDF--L 430
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L ++L RIS+I +AF LTNL L + N ++ + + F SL L L
Sbjct: 431 EATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQY 490
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++I+ G F P+ L L L+ ++ + F GL L L L +N T++ S +L
Sbjct: 491 NLIREIQPGTFDPVPNLQLLFLNNNLLQTLPSGVFSGLTLLR-LNLRSNHFTSLPVSRVL 549
Query: 193 P--TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP-ICSVPPRLSSVTIKQLSID 249
T L IDLH NPW C C ++G++ W+E K + +D IC P + + ++ +
Sbjct: 550 DQLTSLIQIDLHDNPWDCTCDVVGMKLWVEQLKAGVLVDEVICKAPKKFAETDMRSIK-S 608
Query: 250 ELAC 253
EL C
Sbjct: 609 ELLC 612
Score = 222 (83.2 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 70/239 (29%), Positives = 109/239 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C +C C+ K G TV C N+ +I++ E P + L +GN L L+ +F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEF--VNYT 105
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++L I I++ AF GL L L ++N L+ + DTF SL L + N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-- 193
I+ AF L L L L+ + + + F + L L L N++ + +L
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQHM 224
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
+ + L NPW C C LI L+ WL+S + D +C P RL + ++S EL
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
>ZFIN|ZDB-GENE-080327-5 [details] [associations]
symbol:sc:d0316 "sc:d0316" species:7955 "Danio rerio"
[GO:0050770 "regulation of axonogenesis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026878
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-080327-5
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050770
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 PANTHER:PTHR24369:SF8 EMBL:CR388018
IPI:IPI00485297 RefSeq:XP_692888.2 UniGene:Dr.142090
Ensembl:ENSDART00000021605 GeneID:564462 KEGG:dre:564462 CTD:564462
NextBio:20885393 Bgee:F1QCU7 Uniprot:F1QCU7
Length = 631
Score = 276 (102.2 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 91/330 (27%), Positives = 151/330 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ ++ F + L +L+++ L R+
Sbjct: 129 TLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSDAFSR--LPSLRRLDLGELKRL 186
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I S AF+GL+NL L+ L+ VP+ L +L +SGN + I+ +F+ L
Sbjct: 187 SYISSGAFQGLSNLRYLNLGMCNLKEVPN--IQPLIRLDELEMSGNQLTVIQPSSFKGLV 244
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + ++ IE +F L SL L L +N +T + P L + LHHNPW
Sbjct: 245 HLQKLWMMHAQVQTIERNSFDDLHSLRELNLAHNNLTFLPHDLYTPLHHLQRVHLHHNPW 304
Query: 207 TCDCLLIGLRRWL-ESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL E+ T + C+ PP L I +L C P I L
Sbjct: 305 NCNCDILWLSWWLRETVPTNTSCCARCNSPPSLKGRYIGELDQSYFQCYAPVIIEPPVDL 364
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ +++ ++WL P N S+ +H + L
Sbjct: 365 NLTEGMAAELKCRTNSV--TSVSWL---TP--NGSII---THGTLKMRINVQ-NDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D GT+ C N G+TS++ + +
Sbjct: 414 TNVTLQDTGTYTCYVSNMLGNTSASAILNV 443
Score = 208 (78.3 bits), Expect = 6.2e-13, Sum P(2) = 6.2e-13
Identities = 56/175 (32%), Positives = 90/175 (51%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V C + L V +G+ NT+ L+ N ++ +
Sbjct: 36 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICTRRGLKDVPDGVSTNTRYLNLQDNQIQVI 92
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F+ L +L+ + LSR I I+ AF GLT+L L+ N L T+P+ F
Sbjct: 93 KVDSFKH--LRHLEILQLSRNHIRNIEIGAFNGLTSLNTLELFDNRLTTIPNGAFEYLSK 150
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
L +L L NPI+ I + AF L L L+L + + I AF GL +L +L L
Sbjct: 151 LKELWLRNNPIESIPSDAFSRLPSLRRLDLGELKRLSYISSGAFQGLSNLRYLNL 205
Score = 44 (20.5 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 14/42 (33%), Positives = 16/42 (38%)
Query: 592 VPATAYYRTLPHRRHTAANPNNRYSREAEFLSRSSQPASYEH 633
VPA + TLP H N N Y +S S S H
Sbjct: 572 VPAMESHLTLPPLEHDHYNHYNSYKTAYNHVSALSSLHSSVH 613
>ZFIN|ZDB-GENE-030722-4 [details] [associations]
symbol:slit1b "slit homolog 1b (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 ZFIN:ZDB-GENE-030722-4 GO:GO:0007411
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
Pfam:PF02210 Pfam:PF12661 Pfam:PF01463 HOVERGEN:HBG057959
EMBL:DQ153065 IPI:IPI00481688 RefSeq:NP_001030147.1
UniGene:Dr.48282 ProteinModelPortal:Q3Y6S4 SMR:Q3Y6S4 STRING:Q3Y6S4
GeneID:561685 KEGG:dre:561685 CTD:561685 NextBio:20884046
Uniprot:Q3Y6S4
Length = 1532
Score = 281 (104.0 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 84/253 (33%), Positives = 120/253 (47%)
Query: 4 WIFLIATIIKIVS-ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
W L++ + S ACP C C G TV+C + +V + T+ LD NNL
Sbjct: 16 WALLLSLFLSGRSGACPPHCSCT---GS-TVDCHGLAFKSVPRNIPKTTERLDLNANNLT 71
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
+ + F GL +L+ ++L +I ID AF L L L + N LQ +P F
Sbjct: 72 HIGKDDFA--GLKHLRILHLMDNQIVSIDRGAFSDLKELDRLRLNRNRLQQLPELLFLKN 129
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
P+L +L LS N I+ I AF+ + + L+L K I IED AF + LE L L+NN
Sbjct: 130 PALSRLDLSENNIQMIPRRAFRGATDIKNLQLDKNHISCIEDGAFRAMRVLEVLTLNNNN 189
Query: 183 ITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSS 240
I+ I S N +P L LH N CDC L L +WL + + + CS P L
Sbjct: 190 ISAIPISSFNHMPK-LRTFRLHWNSLRCDCQLSWLSQWLRQ-RPALGLYTQCSSPAHLHG 247
Query: 241 VTIKQLSIDELAC 253
+ + +L + C
Sbjct: 248 LNLAELQKKDFTC 260
Score = 194 (73.4 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 66/250 (26%), Positives = 102/250 (40%)
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++ +I L + I + AF L +D S+N + + D F SL L L GN I
Sbjct: 306 SMTEIRLEQNGIKSVPPGAFSSYKRLRRIDLSNNQISEIAPDAFHGLRSLNSLVLYGNKI 365
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT- 194
+ G F LS L L L+ I + F L++L L L +NKI T++ P
Sbjct: 366 TDLPRGVFDGLSALELLLLNANKIHCVRVNVFQDLENLSLLSLYDNKIQTLAKGTFAPLK 425
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+ + L NP+ CDC L L +L S + CS P RL++ I Q+ + C
Sbjct: 426 SIQTLHLAQNPFVCDCGLKWLADFLRSNPIETS-GARCSSPRRLANKRISQIKSKKFRCS 484
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
+Y+ E ++ C + K V N ++ H ST E
Sbjct: 485 A--AKEQYYIPGSEDTRMNKDCNSKPVCPPKCRCEATVVDCSNLRLTKFPEHLPLSTTE- 541
Query: 315 TEIKKSELLI 324
+ ++L I
Sbjct: 542 LRLNNNDLSI 551
Score = 189 (71.6 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 50/193 (25%), Positives = 102/193 (52%)
Query: 68 KFQKMGLVNLQKIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLM 126
KF + ++ ++ L+ +S++++ FR LT+L ++ S+N + + F S++
Sbjct: 530 KFPEHLPLSTTELRLNNNDLSILEATGLFRPLTHLKKINLSNNKITEIEDGAFEGASSVV 589
Query: 127 KLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
+L L+ N + ++ G F+ + L L L I + +++F GL ++ L L +N+++TI
Sbjct: 590 ELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRCVHNSSFSGLQNVRLLSLYDNQLSTI 649
Query: 187 S-GS-NILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIK 244
G+ + LP L ++L NP++CDC L L WL S + +P C P L + ++
Sbjct: 650 MPGAFDSLPN-LSTLNLLANPFSCDCRLSWLGEWLRSRQIVTG-NPRCQNPAFLREIPLQ 707
Query: 245 QLSIDELACEPQI 257
++ + C+ +
Sbjct: 708 DVAKPDFICDKDV 720
Score = 144 (55.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 47/161 (29%), Positives = 71/161 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ V+C N L E + +T L N+L L + L +L
Sbjct: 510 CPPKCRCE----ATVVDCSNLRLTKFPEHLPLSTTELRLNNNDLSILEATGLFRP-LTHL 564
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS +I+ I+ AF G +++V+L + N+L +V F L L L N I+
Sbjct: 565 KKINLSNNKITEIEDGAFEGASSVVELHLTANLLVSVRGGMFRGMDGLRMLMLRNNHIRC 624
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
+ +F L + L L + I AF L +L L L
Sbjct: 625 VHNSSFSGLQNVRLLSLYDNQLSTIMPGAFDSLPNLSTLNL 665
Score = 132 (51.5 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 40/128 (31%), Positives = 57/128 (44%)
Query: 96 RGLT-NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLEL 154
RG+ N+ +L NV ++P + + L L LS N I + +F +S L TL L
Sbjct: 756 RGVPLNVTELYLDGNVFVSIPQE-LSAFRQLQLLDLSNNKISSLTNTSFTNMSQLTTLIL 814
Query: 155 SKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLI 213
S + I F GL SL L L N I+ + L + + NP CDC L
Sbjct: 815 SYNALRCIPPLVFGGLSSLRLLSLHGNNISELHQQIFRDAASLSHLAIGANPLYCDCRLR 874
Query: 214 GLRRWLES 221
L W++S
Sbjct: 875 WLSDWVKS 882
Score = 49 (22.3 bits), Expect = 2.9e-20, Sum P(2) = 2.9e-20
Identities = 20/86 (23%), Positives = 39/86 (45%)
Query: 275 LCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGT 334
LC+ S + + +G P E +S + AV G + E L+ + N D +
Sbjct: 1116 LCEAS-VSACDLLQCVNGAPC--EEISGT---AVCQCLPGFNGLRCEKLL-SVNFIDRDS 1168
Query: 335 FVCVAENQAGSTSSNYTIRIVLKEEN 360
++ + + ST +N T+++ E+N
Sbjct: 1169 YLLLLRDATQSTHNNITLQVSTAEDN 1194
>RGD|1310957 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10116 "Rattus norvegicus" [GO:0007268 "synaptic
transmission" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0007625 "grooming behavior" evidence=ISO]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISO]
[GO:0021756 "striatum development" evidence=ISO] [GO:0030534 "adult
behavior" evidence=ISO] [GO:0043588 "skin development"
evidence=ISO] [GO:0048813 "dendrite morphogenesis" evidence=ISO]
[GO:0072358 "cardiovascular system development" evidence=ISO]
REFSEQ:NM_001107284 Ncbi:NP_001100754
Length = 958
Score = 275 (101.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 72/244 (29%), Positives = 118/244 (48%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKM 72
CPT+C C + V C + + ++ E + P N + + T N + + F +
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAE-LQPKPYNPKKMYLTENYITVVRRTDF--L 430
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L ++L RIS+I +AF L NL L + N ++ + + F SL L L
Sbjct: 431 EATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQY 490
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++I++G F P+ L L L+ ++ + F GL L L L +N T++ S +L
Sbjct: 491 NLIREIQSGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRSNSFTSLPVSGVL 549
Query: 193 P--TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP-ICSVPPRLSSVTIKQLSID 249
T L IDLH NPW C C ++G++ W+E K + +D IC P + + ++ +
Sbjct: 550 DQLTSLIQIDLHDNPWDCTCEVVGMKLWIEQLKVGVLVDEVICKAPKKFAETYMRSIK-S 608
Query: 250 ELAC 253
EL C
Sbjct: 609 ELLC 612
Score = 218 (81.8 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C +C C+ K G TV C N+ +I++ E P + L +GN L L+ +F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++L I I++ AF GL L L ++N L+ + DTF +L L + N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-- 193
I+ AF L L L L+ + + + F + L L L N++ + +L
Sbjct: 166 SVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQHM 224
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
+ + L NPW C C LI L+ WL+S + D +C P RL + ++S EL
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
>UNIPROTKB|E2QXQ1 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AAEX03013291 RefSeq:XP_849372.1
Ensembl:ENSCAFT00000008533 GeneID:485513 KEGG:cfa:485513
NextBio:20859499 Uniprot:E2QXQ1
Length = 958
Score = 273 (101.2 bits), Expect = 5.0e-20, P = 5.0e-20
Identities = 72/244 (29%), Positives = 118/244 (48%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKM 72
CPT+C C + V C + + ++ E + P N + + T N + + F +
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAE-LQPKPYNPKKMYLTENYIAVVRRSDF--L 430
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L ++L RIS+I +AF LTNL L + N ++ + + F SL L L
Sbjct: 431 EATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQY 490
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++I++G F P+ L L L+ ++ + F GL L L L +N T++ S +L
Sbjct: 491 NLIREIQSGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVL 549
Query: 193 PT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP-ICSVPPRLSSVTIKQLSID 249
L IDLH NPW C C ++G++ W+E K + +D IC P + + ++ +
Sbjct: 550 DQLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIK-S 608
Query: 250 ELAC 253
EL C
Sbjct: 609 ELLC 612
Score = 222 (83.2 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 70/239 (29%), Positives = 109/239 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C +C C+ K G TV C N+ +I++ E P + L +GN L L+ +F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++L I I++ AF GL L L ++N L+ + DTF SL L + N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-- 193
I+ AF L L L L+ + + + F + L L L N++ + +L
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQHM 224
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
+ + L NPW C C LI L+ WL+S + D +C P RL + ++S EL
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
>ZFIN|ZDB-GENE-030722-3 [details] [associations]
symbol:slit1a "slit homolog 1a (Drosophila)"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=NAS] [GO:0005576
"extracellular region" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IMP] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-030722-3 GO:GO:0007411 GO:GO:0005576
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 GO:GO:0045773 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 Pfam:PF12661
GO:GO:0051964 Pfam:PF01463 HOVERGEN:HBG057959 KO:K06838
EMBL:DQ177286 IPI:IPI00506990 RefSeq:NP_001030140.1
UniGene:Dr.88478 ProteinModelPortal:Q3S2J2 SMR:Q3S2J2 STRING:Q3S2J2
GeneID:556123 KEGG:dre:556123 CTD:556123 NextBio:20881326
Uniprot:Q3S2J2
Length = 1524
Score = 284 (105.0 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 81/255 (31%), Positives = 121/255 (47%)
Query: 4 WIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
W+ L+ + K S CP C C G TV+C L + + NT+ L+ GNNL
Sbjct: 15 WVLLL--VCKTGSGCPALCTCS---GT-TVDCHGLGLKNIPRNIPRNTERLELNGNNLTR 68
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
++ F GL L+ + L +I ++ AF + L L + N L +P F
Sbjct: 69 INRNDFT--GLKYLRVLQLMENQIVTVERGAFDEMRELERLRLNRNQLHQLPELLFQKNA 126
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
+L +L LS N I+ I AF+ + + L+L K I IED AF + LE L L+NN I
Sbjct: 127 ALSRLDLSENFIQAIPRKAFRGATDIKNLQLDKNHISCIEDGAFRAMRGLEVLTLNNNNI 186
Query: 184 TTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSV 241
++I S N +P L LH N CDC+L L +WL + + + CS P L +
Sbjct: 187 SSIPVSSFNHMPK-LRTFRLHSNNLVCDCVLSWLSQWLRE-RPNIGLFTQCSSPAPLRGL 244
Query: 242 TIKQLSIDELACEPQ 256
+ ++ E +C Q
Sbjct: 245 NVAEVQKHEFSCSGQ 259
Score = 183 (69.5 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
Identities = 50/175 (28%), Positives = 87/175 (49%)
Query: 82 LSRCRISVIDSK-AFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKT 140
L+ I+ I++ AF+ LT+L ++ S+N + + F S+ +L L+ N + +
Sbjct: 540 LNNNEITTIEAMGAFKTLTHLKKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHS 599
Query: 141 GAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGI 199
G F+ L L L L I I + +F GL ++ L L +N +TTI+ G+ L +
Sbjct: 600 GMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTL 659
Query: 200 DLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+L NP+ C+C L L WL + K +P C P L + ++ ++ + CE
Sbjct: 660 NLLANPFNCNCRLAWLSSWLRNRKIVTG-NPRCHRPAFLKEIPLQDVAAPDFRCE 713
Score = 171 (65.3 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 69/275 (25%), Positives = 112/275 (40%)
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++ +I L + I I AF L +D S+N + + D F SL L L GN I
Sbjct: 303 SMTEIRLEQNSIKSIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKI 362
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPT 194
+ G F L L L L+ I + F L +L L L +NKI T++ G+
Sbjct: 363 TDLPRGVFDGLHALQLLLLNANKIHCLRANTFQDLQNLSLLSLYDNKIQTLAKGTFSSLR 422
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+ + L NP+ CDC L L +L S + C+ P RL++ I Q+ + C
Sbjct: 423 AIQTLHLAQNPFICDCNLKWLADYLRSNPIETS-GARCTSPRRLANKRIGQIKSKKFRCS 481
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
+ + + E ++ C + AK + V N + H ST E
Sbjct: 482 AK---EQYAIPGTEDSRLNNDCNNDPVCPAKCRCESNVVDCSNLRLDRIPEHVPASTTE- 537
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSN 349
+ +E+ + I+ G F + + + S+N
Sbjct: 538 PRLNNNEI----TTIEAMGAFKTLTHLKKINLSNN 568
Score = 158 (60.7 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 45/135 (33%), Positives = 64/135 (47%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V C NK L + +G N L GN L T+ E +L
Sbjct: 727 CPADCTCL----ESVVRCSNKHLQALPKGTPRNITELYLDGNQLSTVPKEL---SSFKSL 779
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + LS RIS + + +F ++ L L S+N L+ +P+ F SL L+L GN I +
Sbjct: 780 QLVDLSNNRISSLTNSSFTNMSQLTTLILSYNALRCIPTLAFSGLRSLRLLSLHGNDISE 839
Query: 138 IKTGAF---QPLSYL 149
+ G F Q LS+L
Sbjct: 840 LPDGIFSDAQSLSHL 854
Score = 141 (54.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 45/159 (28%), Positives = 67/159 (42%)
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
N+ +L N L TVP + + SL + LS N I + +F +S L TL LS +
Sbjct: 755 NITELYLDGNQLSTVPKE-LSSFKSLQLVDLSNNRISSLTNSSFTNMSQLTTLILSYNAL 813
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRW 218
I AF GL SL L L N I+ + G L + + NP CDC L L W
Sbjct: 814 RCIPTLAFSGLRSLRLLSLHGNDISELPDGIFSDAQSLSHLAIGANPLHCDCGLRWLSDW 873
Query: 219 LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQI 257
+++ I C+ P + + C+ ++
Sbjct: 874 VKTGYKEPGIAR-CASPHGMEGKLLLTTPAKRFECQGEV 911
Score = 136 (52.9 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 48/161 (29%), Positives = 67/161 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ V+C N L + E + +T N + T+ K L +L
Sbjct: 506 CPAKCRCE----SNVVDCSNLRLDRIPEHVPASTTEPRLNNNEITTIEAMGAFKT-LTHL 560
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS +IS I+ AF G +++ +L + N L S F L L L N I
Sbjct: 561 KKINLSNNKISEIEDGAFEGASSVNELHLTANQLDLAHSGMFRGLEGLRMLMLRNNRISC 620
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
I +F L + L L + I AF L SL L L
Sbjct: 621 IHNNSFTGLHNVRLLSLYDNTLTTIAPGAFDTLQSLSTLNL 661
Score = 43 (20.2 bits), Expect = 5.7e-20, Sum P(2) = 5.7e-20
Identities = 7/11 (63%), Positives = 10/11 (90%)
Query: 302 ASESHAVYSTE 312
+ +SHA+YSTE
Sbjct: 1219 SQQSHAIYSTE 1229
>ZFIN|ZDB-GENE-050522-160 [details] [associations]
symbol:lrit2 "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 2" species:7955
"Danio rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-050522-160 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:P07359 EMBL:BC095086 IPI:IPI00493555 RefSeq:NP_001018372.2
UniGene:Dr.82810 ProteinModelPortal:Q504C1 GeneID:553557
KEGG:dre:553557 CTD:340745 HOGENOM:HOG000082676 HOVERGEN:HBG060406
InParanoid:Q504C1 OrthoDB:EOG4X97H6 NextBio:20880298 Uniprot:Q504C1
Length = 561
Score = 268 (99.4 bits), Expect = 5.8e-20, P = 5.8e-20
Identities = 94/347 (27%), Positives = 154/347 (44%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+F I I I S C C C +++ C+ +L + +G+ + + + L L
Sbjct: 11 VFCIL-ISHISSECFPGCSCGTDRHGRSLTCMETALTGIPDGLPEDLTKIRIEKSQLSEL 69
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F + L+ ++L+ I++I+ K+ GL NL +L N L++VP F + P+
Sbjct: 70 PEAVFSHVKA--LKHLWLNFNDIAIINIKSLEGLANLTELRLQGNKLRSVPWTAFEETPN 127
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEW-LKLDNNKI 183
L L L N I + A + L L L+LS + VI F L W L NK
Sbjct: 128 LKILDLKHNRIDALPEHALKFLPGLTYLDLSSNQLSVISKDVF-----LNWPLYHSENKH 182
Query: 184 TTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP---ICSVPPRLSS 240
S SN++ + LH NPW CDC L G +++S P + CS P +
Sbjct: 183 EKPSASNVV------LALHDNPWLCDCRLGGFIEFIKSLTPPFILMNSYLTCSSPELKAG 236
Query: 241 VTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESM 300
++ + + +P ++ + G NV+L C SA PEA I W++ ++
Sbjct: 237 RFFHEVDL-KTCVKPVVSAPVITITAPLGGNVTLTCSASARPEAVIRWIYALKMLRG--F 293
Query: 301 SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
SH +E T S+L+I + + D G + C+A N G++S
Sbjct: 294 RDILSHV----DEDTI--SSQLVIPSLHSADRGLYTCIANNFLGNSS 334
>MGI|MGI:2679448 [details] [associations]
symbol:Slitrk5 "SLIT and NTRK-like family, member 5"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007268 "synaptic transmission" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0007625 "grooming
behavior" evidence=IMP] [GO:0009410 "response to xenobiotic
stimulus" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0021756
"striatum development" evidence=IMP] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0043588 "skin development" evidence=IMP]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0072358
"cardiovascular system development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2679448 GO:GO:0016021
GO:GO:0043588 GO:GO:0007268 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0048813 GO:GO:0007409
GO:GO:0030534 GO:GO:0009410 InterPro:IPR000372 SMART:SM00013
GO:GO:0007625 GO:GO:0021756 GO:GO:0072358 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 eggNOG:NOG147171
CTD:26050 OMA:HHRGPAL OrthoDB:EOG4X97GH EMBL:AB097574 EMBL:BC065107
EMBL:AK011457 IPI:IPI00329844 IPI:IPI00410889 RefSeq:NP_942565.1
UniGene:Mm.235097 UniGene:Mm.417152 ProteinModelPortal:Q810B7
SMR:Q810B7 STRING:Q810B7 PhosphoSite:Q810B7 PRIDE:Q810B7
Ensembl:ENSMUST00000042767 GeneID:75409 KEGG:mmu:75409
UCSC:uc011zpr.1 InParanoid:Q810B7 NextBio:342932 Bgee:Q810B7
CleanEx:MM_SLITRK5 Genevestigator:Q810B7
GermOnline:ENSMUSG00000033214 Uniprot:Q810B7
Length = 957
Score = 272 (100.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 72/244 (29%), Positives = 116/244 (47%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKM 72
CPT+C C + V C + + ++ E + P N + + T N + + F +
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAE-LQPKPYNPKKMYLTENYITVVRRTDF--L 430
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L ++L RIS+I +AF L NL L + N ++ + + F SL L L
Sbjct: 431 EATGLDLLHLGNNRISMIQDRAFGDLGNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQY 490
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++I+ G F P+ L L L+ ++ + F GL L L L N T++ S +L
Sbjct: 491 NLIREIQAGTFDPVPNLQLLFLNNNQLQAMPSGVFSGLTLLR-LNLRGNSFTSLPVSGVL 549
Query: 193 P--TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP-ICSVPPRLSSVTIKQLSID 249
T L IDLH NPW C C ++G++ W+E K + +D IC P + + ++ +
Sbjct: 550 DQLTSLIQIDLHDNPWDCTCDVVGMKLWIEQLKVGVLVDEVICKAPKKFAETYMRSIK-S 608
Query: 250 ELAC 253
EL C
Sbjct: 609 ELLC 612
Score = 218 (81.8 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C +C C+ K G TV C N+ +I++ E P + L +GN L L+ +F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEF--VNYT 105
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++L I I++ AF GL L L ++N L+ + DTF +L L + N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-- 193
I+ AF L L L L+ + + + F + L L L N++ + +L
Sbjct: 166 SVIEPNAFGKLHMLQVLILNDNLLSGLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQHM 224
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
+ + L NPW C C LI L+ WL+S + D +C P RL + ++S EL
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
>UNIPROTKB|O94991 [details] [associations]
symbol:SLITRK5 "SLIT and NTRK-like protein 5" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471085
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 eggNOG:NOG147171 EMBL:AB020725 EMBL:AK024251
EMBL:AL603883 EMBL:BC098106 EMBL:BC103509 IPI:IPI00016679
RefSeq:NP_056382.1 UniGene:Hs.591208 ProteinModelPortal:O94991
SMR:O94991 STRING:O94991 PhosphoSite:O94991 PaxDb:O94991
PRIDE:O94991 Ensembl:ENST00000325089 GeneID:26050 KEGG:hsa:26050
UCSC:uc001vln.3 CTD:26050 GeneCards:GC13P088324 HGNC:HGNC:20295
HPA:HPA013843 MIM:609680 neXtProt:NX_O94991 PharmGKB:PA134885524
InParanoid:O94991 OMA:HHRGPAL OrthoDB:EOG4X97GH PhylomeDB:O94991
GenomeRNAi:26050 NextBio:47908 ArrayExpress:O94991 Bgee:O94991
CleanEx:HS_SLITRK5 Genevestigator:O94991 GermOnline:ENSG00000165300
Uniprot:O94991
Length = 958
Score = 272 (100.8 bits), Expect = 6.4e-20, P = 6.4e-20
Identities = 72/244 (29%), Positives = 118/244 (48%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKM 72
CPT+C C + V C + + ++ E + P N + + T N + + F +
Sbjct: 374 CPTACSCNLQISDLGLNVNCQERKIESIAE-LQPKPYNPKKMYLTENYIAVVRRTDF--L 430
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L ++L RIS+I +AF LTNL L + N ++ + + F SL L L
Sbjct: 431 EATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQY 490
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++I++G F P+ L L L+ ++ + F GL L L L +N T++ S +L
Sbjct: 491 NLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVL 549
Query: 193 PT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP-ICSVPPRLSSVTIKQLSID 249
L IDLH NPW C C ++G++ W+E K + +D IC P + + ++ +
Sbjct: 550 DQLKSLIQIDLHDNPWDCTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIK-S 608
Query: 250 ELAC 253
EL C
Sbjct: 609 ELLC 612
Score = 219 (82.2 bits), Expect = 3.6e-14, P = 3.6e-14
Identities = 69/239 (28%), Positives = 109/239 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C +C C+ K G TV C N+ +I++ E P + L +GN L L+ +F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++L I I++ AF GL L L ++N L+ + DTF +L L + N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYI 165
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-- 193
I+ AF L L L L+ + + + F + L L L N++ + +L
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYVGLLQHM 224
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
+ + L NPW C C LI L+ WL+S + D +C P RL + ++S EL
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
>MGI|MGI:1315202 [details] [associations]
symbol:Slit3 "slit homolog 3 (Drosophila)" species:10090
"Mus musculus" [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0007411
"axon guidance" evidence=ISO;IDA] [GO:0008285 "negative regulation
of cell proliferation" evidence=IGI] [GO:0009887 "organ
morphogenesis" evidence=IGI;IMP] [GO:0010629 "negative regulation
of gene expression" evidence=IGI] [GO:0016020 "membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035385 "Roundabout signaling pathway" evidence=ISO]
[GO:0048495 "Roundabout binding" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO] [GO:0070100 "negative
regulation of chemokine-mediated signaling pathway" evidence=ISO]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
MGI:MGI:1315202 GO:GO:0005739 GO:GO:0007411 GO:GO:0008285
GO:GO:0005615 GO:GO:0007420 GO:GO:0030308 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186 GO:GO:0032870
GO:GO:0010629 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661 Pfam:PF01463
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 HOGENOM:HOG000116120 HOVERGEN:HBG057959
OrthoDB:EOG4D7Z4T CTD:6586 KO:K06850 ChiTaRS:SLIT3 EMBL:AF144629
EMBL:AL669839 EMBL:AL669856 EMBL:AL731688 EMBL:AL732401
EMBL:AL732630 IPI:IPI00664551 RefSeq:NP_035542.2 UniGene:Mm.478604
ProteinModelPortal:Q9WVB4 SMR:Q9WVB4 STRING:Q9WVB4
PhosphoSite:Q9WVB4 PRIDE:Q9WVB4 Ensembl:ENSMUST00000069837
GeneID:20564 KEGG:mmu:20564 InParanoid:B1ATW4 OMA:SVDCHGL
NextBio:298861 Bgee:Q9WVB4 CleanEx:MM_SLIT3 Genevestigator:Q9WVB4
GermOnline:ENSMUSG00000056427 Uniprot:Q9WVB4
Length = 1523
Score = 288 (106.4 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 79/240 (32%), Positives = 115/240 (47%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ACPT C C +V+C L V G+ N + LD NN+ + F GL
Sbjct: 32 AACPTKCTCS----AASVDCHGLGLRAVPRGIPRNAERLDLDRNNITRITKMDFA--GLK 85
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
NL+ ++L ++S+I+ AF+ L L L + N LQ +P F P L +L LS N I
Sbjct: 86 NLRVLHLEDNQVSIIERGAFQDLKQLERLRLNKNKLQVLPELLFQSTPKLTRLDLSENQI 145
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI--SGSNILP 193
+ I AF+ ++ + L+L I IED AF L LE L L+NN I+ I + N +P
Sbjct: 146 QGIPRKAFRGVTGVKNLQLDNNHISCIEDGAFRALRDLEILTLNNNNISRILVTSFNHMP 205
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ + LH N CDC L L WL +T + +C P L ++ + E C
Sbjct: 206 K-IRTLRLHSNHLYCDCHLAWLSDWLRQRRT-IGQFTLCMAPVHLRGFSVADVQKKEYVC 263
Score = 206 (77.6 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
Identities = 53/170 (31%), Positives = 90/170 (52%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
ISV+++ F+ L NL ++ S+N ++ V F + +L L+GN ++ + F+
Sbjct: 544 ISVLEATGIFKKLPNLRKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRG 603
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTI+ G+ L I+L N
Sbjct: 604 LSSLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C + L RWL + ++ +P C P L + I+ ++I + C+
Sbjct: 664 PFNCNCHMAWLGRWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCD 712
Score = 183 (69.5 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 55/176 (31%), Positives = 78/176 (44%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 311 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 370
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS +P +
Sbjct: 371 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQ 430
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 431 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 485
Score = 156 (60.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 46/165 (27%), Positives = 74/165 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP++C C V+C K L + + + N++K++ F +
Sbjct: 279 SCPSACSCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYK--K 332
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + +P F SL L L+ N I
Sbjct: 333 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 392
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I FV L S++ L L N
Sbjct: 393 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFVPLQSIQTLHLAQN 437
Score = 149 (57.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 48/162 (29%), Positives = 75/162 (46%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNE--KFQKMGLV 75
CP C C + V C N+ L + +GM + L GN+L + E F+++ L+
Sbjct: 725 CPEQCTCV----ETVVRCSNRGLHALPKGMPKDVTELYLEGNHLTAVPKELSAFRQLTLI 780
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L S IS++ + F +++L L S+N L+ +P F SL LTL GN I
Sbjct: 781 DL-----SNNSISMLTNHTFSNMSHLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDI 835
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
+ G+F L+ L L L + D + L EW+K
Sbjct: 836 SSVPEGSFNDLTSLSHLALGTNPLHC--DCSLRWLS--EWVK 873
Score = 143 (55.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 51/164 (31%), Positives = 69/164 (42%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L + + T L N++ L K L NL
Sbjct: 505 CPEKCRCE--G--TIVDCSNQKLARIPSHLPEYTTDLRLNDNDISVLEATGIFKK-LPNL 559
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS RI + AF G + +L + N L+T+ F SL L L N I
Sbjct: 560 RKINLSNNRIKEVREGAFDGAAGVQELMLTGNQLETMHGRMFRGLSSLKTLMLRSNLISC 619
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 620 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 663
Score = 38 (18.4 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 439 ATCMDKVNGGYIIA-DGHNDMMLYATDSGILVATNNMNTY 477
A C+D+VNG I G + + +L+ T+ + Y
Sbjct: 1087 AQCVDEVNGYTCICPQGFSGLFCEHPPPMVLLQTSPCDQY 1126
>RGD|735030 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10116 "Rattus norvegicus" [GO:0001503 "ossification"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042246
"tissue regeneration" evidence=IDA] InterPro:IPR007110
PROSITE:PS50835 RGD:735030 GO:GO:0007275 GO:GO:0005576
GO:GO:0030154 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042246 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0001503 HSSP:Q9BZR6 CTD:285313 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 OrthoDB:EOG45MN4F
EMBL:AY273816 IPI:IPI00400618 RefSeq:NP_942063.1 UniGene:Rn.205647
ProteinModelPortal:Q6WRH9 STRING:Q6WRH9 PhosphoSite:Q6WRH9
PRIDE:Q6WRH9 GeneID:310448 KEGG:rno:310448 UCSC:RGD:735030
InParanoid:Q6WRH9 NextBio:662025 ArrayExpress:Q6WRH9
Genevestigator:Q6WRH9 Uniprot:Q6WRH9
Length = 2597
Score = 215 (80.7 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 65/214 (30%), Positives = 99/214 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C V C + L ++ +G+ N + ++ N+L L F GL
Sbjct: 28 ACPRRCACYVP---TEVHCTFRYLTSIPDGIPANVERINLGYNSLTRLTENDFD--GLSK 82
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ + L I + K F GL +L L S+N +Q + DTF SL++L L N I+
Sbjct: 83 LELLMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIRKDTFYGLGSLVRLHLDHNNIE 142
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE--------WLKLDNNKITTISG 188
I AF L+ L + L + + FV L L+ +L L +N +T++
Sbjct: 143 FINPEAFYGLTSLRLVHLEGNRLTKLHPDTFVSLSYLQIFKTSFIKYLFLSDNFLTSLPK 202
Query: 189 SNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLE 220
+ +P L + LH NPWTCDC L L W++
Sbjct: 203 EMVSYMPN-LESLYLHGNPWTCDCHLKWLSEWMQ 235
Score = 118 (46.6 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 264 LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
+ + G V L C+V +P ++W+ + +E+ A S V+ T +GT L+
Sbjct: 1729 ITVHFGSTVELKCRVEGMPRPTVSWILANQTVVSET--AKGSRKVWVTPDGT------LI 1780
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
IYN ++ D G + CVA N +G S I+++
Sbjct: 1781 IYNLSLYDRGFYKCVASNPSGQDSLLVKIQVI 1812
Score = 105 (42.0 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 36/130 (27%), Positives = 58/130 (44%)
Query: 229 DPICSVPPRLSSVTIKQLSIDELACEPQITPS-TFYLEIQEGKNVSLLCKVSAIPEAKIT 287
D ICS L +K + + L P+I S + ++ G+ L C+V+ P+ +
Sbjct: 2090 DYICSAQNTLGKDEMK-VHLTVLTAIPRIRQSYKTTMRLRAGETAVLDCEVTGEPKPNVF 2148
Query: 288 WLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
WL +P N +S S + I K + L D+G +VCVA+N +G +
Sbjct: 2149 WL---LP-SNNVISFSNDRFTFHANRTLSIHKVKPL-------DSGDYVCVAQNPSGDDT 2197
Query: 348 SNYTIRIVLK 357
Y + IV K
Sbjct: 2198 KTYKLDIVSK 2207
Score = 94 (38.1 bits), Expect = 2.9e-17, Sum P(2) = 2.9e-17
Identities = 24/84 (28%), Positives = 40/84 (47%)
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKS 320
F ++ GK+ + CK S P +++W L DG + N + A +S Y T+ T
Sbjct: 2020 FKKQVLHGKDFQVDCKASGSPVPEVSWSLPDGTVLNNVAQ-ADDSG--YRTKRYTLFHNG 2076
Query: 321 ELLIYNSNIDDNGTFVCVAENQAG 344
L N + + G ++C A+N G
Sbjct: 2077 TLYFNNVGMAEEGDYICSAQNTLG 2100
Score = 93 (37.8 bits), Expect = 3.6e-17, Sum P(2) = 3.6e-17
Identities = 38/141 (26%), Positives = 60/141 (42%)
Query: 240 SVTIKQLSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQN 297
SV + QL + E+ P P + Q GK V+L C V P +ITW+ DG N
Sbjct: 2296 SVLVVQLEVLEMLRRPTFRNPFNEKVIAQAGKPVALNCSVDGNPPPEITWILPDGTQFAN 2355
Query: 298 ESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLK 357
++ A G L++Y + + +G + C A N+ G Y +++L
Sbjct: 2356 RPHNSPYLMA------GN----GSLILYKATRNKSGKYRCAARNKVG-----YIEKLILL 2400
Query: 358 EENVE-VVTVFPLEYVLIVSG 377
E + V+ + V VSG
Sbjct: 2401 EIGQKPVILTYEPGMVKSVSG 2421
Score = 76 (31.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 22/93 (23%), Positives = 43/93 (46%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ + L C + +P+A I+W+ G + ++ S + + GT L I
Sbjct: 588 GETLDLPCLSTGVPDASISWILPGNTVFSQP---SRDRQILNN--GT------LRILQVT 636
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIVLKEENV 361
D G + CVA N +G+ S++ + + K + +
Sbjct: 637 PKDQGHYQCVAANPSGADFSSFKVSVQKKGQRM 669
Score = 76 (31.8 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 28/119 (23%), Positives = 51/119 (42%)
Query: 246 LSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNE-SMSAS 303
L+++E P+I T S + E+ G+ + L C + P+ +I W + ++ S
Sbjct: 1906 LTVEEGETIPRIETASQKWTEVNLGEKLLLNCSATGDPKPRIIWRLPSKAVIDQWHRMGS 1965
Query: 304 ESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVE 362
H VY L++ + D G ++CVA N+ G +R+ L +E
Sbjct: 1966 RIH-VYPN--------GSLVVGSVTEKDAGDYLCVARNKMGDDLVLMHVRLRLTPAKIE 2015
Score = 74 (31.1 bits), Expect = 3.4e-15, Sum P(2) = 3.4e-15
Identities = 26/114 (22%), Positives = 51/114 (44%)
Query: 243 IKQLSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
I++L + E+ +P I T ++ G+ +SL C IP+ + W G + +
Sbjct: 2394 IEKLILLEIGQKPVILTYEPGMVKSVSGEPLSLHCVSDGIPKPNVKWTTPGGHVIDRPQ- 2452
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ ++ E GT L+I + D G ++C A+N G + ++ +V
Sbjct: 2453 VDGKYILH--ENGT------LVIKATTAHDQGNYICRAQNSVGQAVISVSVMVV 2498
Score = 72 (30.4 bits), Expect = 5.6e-15, Sum P(2) = 5.6e-15
Identities = 20/87 (22%), Positives = 40/87 (45%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ + L C IP+ K+TW + +++ + + +GT L+I N
Sbjct: 2517 GEAMQLHCVALGIPKPKVTWETPRHSLLSKATARKPHRSEMLHPQGT------LVIQNLQ 2570
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIV 355
D+G + C A+N G+ + I+++
Sbjct: 2571 TSDSGVYKCRAQNLLGTDYATTYIQVL 2597
Score = 65 (27.9 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 23/90 (25%), Positives = 39/90 (43%)
Query: 269 GKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEI--KKSELLIY 325
G ++L C P + WL DG S+ A Y +E+G + K +L +
Sbjct: 490 GGTIALSCPGKGDPSPHLEWLLADG----------SKVRAPYVSEDGRILIDKNGKLELQ 539
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ D G + C++ N A + Y I +V
Sbjct: 540 MADSFDAGLYHCISTNDADADVLTYRITVV 569
Score = 57 (25.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 269 GKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNS 327
G ++ L C P+ + W L+DG ++ ++ S +Y GT L I +
Sbjct: 1831 GGSLKLPCTAKGTPQPSVHWVLYDGTELKPLQLTHSRFF-LYPN--GT------LYIRSI 1881
Query: 328 NIDDNGTFVCVAENQAGS 345
GT+ C+A + +GS
Sbjct: 1882 APSVRGTYECIATSSSGS 1899
Score = 47 (21.6 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 25/108 (23%), Positives = 45/108 (41%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITW--LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
+ +V L C+ P I W + G+ I ++ S H + GT L
Sbjct: 1634 VPANSDVFLPCEAVGDPLPIIHWTRVSSGLEI-SQGTQKSRFHVL---PNGT------LS 1683
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV-----LKEENVEVVTV 366
I +I D G ++C A N G + ++ +V + + +V+ +TV
Sbjct: 1684 IQRVSIQDRGQYLCSAFNPLGVDHFHVSLSVVFYPARILDRHVKEITV 1731
Score = 46 (21.3 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 23/100 (23%), Positives = 38/100 (38%)
Query: 259 PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF---DGVPIQ----NESMSASESHAVYST 311
PS+ + + + NV ++ + S K LF V I+ S ES+ V T
Sbjct: 1081 PSSSHSALPKTNNVGVIAEESTTVVKKPLLLFKDKQNVDIEIITTTTKYSGGESNHVIPT 1140
Query: 312 EEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYT 351
E + + + S +D++G Q G S T
Sbjct: 1141 EASMTSAPTSVSLGKSPVDNSGHLSMPGTIQTGKDSVETT 1180
Score = 45 (20.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 268 EGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKS 320
+G NVS + S IT LF+ + +A E+ + ++E T +K++
Sbjct: 1388 DGGNVSAVAYHSTTSLLAITELFEKYTQTLGNTTALETTLLSKSQESTTVKRA 1440
Score = 42 (19.8 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 13/60 (21%), Positives = 24/60 (40%)
Query: 293 VPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
VP + S ++ EE T + K LL++ + + + +G SN+ I
Sbjct: 1080 VPSSSHSALPKTNNVGVIAEESTTVVKKPLLLFKDKQNVDIEIITTTTKYSGG-ESNHVI 1138
>UNIPROTKB|F1NRZ3 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:AADN02043142
IPI:IPI00581464 Ensembl:ENSGALT00000012536 Uniprot:F1NRZ3
Length = 483
Score = 258 (95.9 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 85/278 (30%), Positives = 134/278 (48%)
Query: 5 IFLIATIIKIV-SACPTSCICKWKGGKQTVECVNKSLITVVE-----GMDPNTQVLDYTG 58
IFL I +V S TSC T+ ++ + I+++E G++ + LD +
Sbjct: 62 IFLHNNKITLVRSTSFTSC------RNMTILWIHSNNISLIEPGAFYGLN-KLEELDLSD 114
Query: 59 N-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N NLK+++ F+ GLV+L ++L RC + + + FRGL +L L N LQ + D
Sbjct: 115 NTNLKSINPVTFR--GLVHLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLDD 172
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
TF D +L L L GN IK + F+ L L L L + + ++ +F L + L
Sbjct: 173 TFIDLANLTYLFLHGNKIKSLSENVFRGLINLDRLLLHQNRVSLVHRRSFHDLGKVMTLY 232
Query: 178 LDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPP 236
L NN +T ++G + P L + L+ N W CDC L W + K + + C +PP
Sbjct: 233 LFNNNLTVLTGETMAPLVSLQYLRLNGNQWICDCQARSLWNWFKQFKGSSS-ELECHLPP 291
Query: 237 RLSSVTIKQLSIDEL-ACEP---QITPSTFYLEIQEGK 270
L+ +K+L +L C QI S F + + GK
Sbjct: 292 HLAGRDLKRLQSSDLEGCIDSFNQIRTSVFSTKTRSGK 329
Score = 177 (67.4 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 57/204 (27%), Positives = 95/204 (46%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L I V +CP +C+C + K T+ C + L + + +Q + N + +
Sbjct: 14 LVLCLNIQSEVESCPGACVC-YSEPKITISCQQQGLTAIPTEIPIQSQRIFLHNNKITLV 72
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYP 123
+ F N+ +++ IS+I+ AF GL L +LD S N L+++ TF
Sbjct: 73 RSTSFTSCR--NMTILWIHSNNISLIEPGAFYGLNKLEELDLSDNTNLKSINPVTFRGLV 130
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + ++ TG F+ L L L L ++ + D F+ L +L +L L NKI
Sbjct: 131 HLHTLHLDRCGLMELSTGLFRGLFSLQYLYLQDNNLQNLLDDTFIDLANLTYLFLHGNKI 190
Query: 184 TTISGSNILPTGLHGID---LHHN 204
++S N+ GL +D LH N
Sbjct: 191 KSLS-ENVF-RGLINLDRLLLHQN 212
Score = 50 (22.7 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 693 SSADEQPSTSNPEKSNENKSE 713
SS +PS++NP K EN S+
Sbjct: 366 SSHSSRPSSNNPLKDKENMSK 386
Score = 37 (18.1 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 409 ESDKNVNGSNENVVKNLRESP 429
E+D + NGSN K + +SP
Sbjct: 391 ETDPSKNGSN----KQINDSP 407
>UNIPROTKB|F1RP61 [details] [associations]
symbol:SLITRK5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:26050 OMA:HHRGPAL EMBL:AEMK01182519 EMBL:CT963117 EMBL:CU041325
RefSeq:XP_003357919.1 Ensembl:ENSSSCT00000010403 GeneID:100155909
KEGG:ssc:100155909 Uniprot:F1RP61
Length = 964
Score = 270 (100.1 bits), Expect = 1.1e-19, P = 1.1e-19
Identities = 72/244 (29%), Positives = 117/244 (47%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKM 72
CPT+C C + V C + + ++ E + P N + + T N + + F +
Sbjct: 374 CPTACTCNLQISDLGLNVNCQERKIESIAE-LQPKPYNPKKMYLTENYIALVRRSDF--L 430
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L ++L RIS+I +AF LTNL L + N ++ + + F SL L L
Sbjct: 431 EATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQY 490
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++I+ G F P+ L L L+ ++ + F GL L L L +N T++ S +L
Sbjct: 491 NLIREIQPGTFDPVPNLQLLFLNNNLLQTMPSGVFSGLTLLR-LNLRSNHFTSLPVSGVL 549
Query: 193 PT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP-ICSVPPRLSSVTIKQLSID 249
L IDLH NPW C C ++G++ W+E K + +D IC P + + ++ +
Sbjct: 550 DQLKSLIQIDLHDNPWDCTCDVVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIK-S 608
Query: 250 ELAC 253
EL C
Sbjct: 609 ELLC 612
Score = 223 (83.6 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 70/239 (29%), Positives = 109/239 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C +C C+ K G TV C N+ +I++ E P + L +GN L L+ +F +
Sbjct: 48 CDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEF--VNYT 105
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
++L I I++ AF GL L L ++N L+ + DTF SL L + N I
Sbjct: 106 GASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLESLEYLQVDYNYI 165
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-- 193
I+ AF L L L L+ + + + F + L L L N++ + +L
Sbjct: 166 SVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVP-LTHLDLRGNRLKLLPYMGLLQHM 224
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
+ + L NPW C C LI L+ WL+S + D +C P RL + ++S EL
Sbjct: 225 DKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQEL 283
>ZFIN|ZDB-GENE-050522-533 [details] [associations]
symbol:lrrc4c "leucine rich repeat containing 4C"
species:7955 "Danio rerio" [GO:0050770 "regulation of axonogenesis"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026878 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-050522-533 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0050770 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
HOVERGEN:HBG052359 CTD:57689 KO:K07523 OMA:WITPNGS
PANTHER:PTHR24369:SF8 EMBL:BC095314 IPI:IPI00495437
RefSeq:NP_001018583.1 UniGene:Dr.79725 ProteinModelPortal:Q503I7
GeneID:553785 KEGG:dre:553785 InParanoid:Q503I7 NextBio:20880504
Uniprot:Q503I7
Length = 647
Score = 275 (101.9 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 92/336 (27%), Positives = 153/336 (45%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLD--YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L T+ G L + NN ++++ + F ++ +L+++ L R+
Sbjct: 129 TLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 186
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S I AF GL+NL L+ L+ +P+ P L +L +SGN + I+ G+F+ L
Sbjct: 187 SYISEGAFEGLSNLRYLNLGMCNLKEIPN-LIP-LVRLDELEMSGNQLSIIRPGSFKGLV 244
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
+L L + I+ IE AF L SL L L +N +T + P L + LHHNPW
Sbjct: 245 HLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLHHNPW 304
Query: 207 TCDCLLIGLRRWL-ESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL E + CS P I +L + C P I L
Sbjct: 305 NCNCDILWLSWWLKEMVPANTSCCARCSSPTSHKGRYIGELDQNYFHCYAPVIVEPPADL 364
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ +++ ++W+ P N S+ +H Y + L
Sbjct: 365 NVTEGMAAELKCRANSL--TSVSWI---TP--NGSIM---THGAYKIRISV-LNDGTLNF 413
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEEN 360
N + D GT+ C+ N AG+T+++ T+ + E +
Sbjct: 414 TNVTMQDTGTYTCMVSNSAGNTTASATLNVSSTENS 449
Score = 201 (75.8 bits), Expect = 2.1e-11, Sum P(2) = 2.1e-11
Identities = 57/190 (30%), Positives = 96/190 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ ++A +++ CP+ C C + K V C + L V +G+ NT+ L+ N ++ +
Sbjct: 36 LLVVAGLVR-AQTCPSVCSCSNQFSK--VICTRRGLRDVPDGISTNTRYLNLQENLIQVI 92
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F+ L +L+ + LS+ I I+ AF GL NL L+ N L T+P+ F
Sbjct: 93 KVDSFKH--LRHLEILQLSKNHIRNIEIGAFNGLANLNTLELFDNRLTTIPNGAFEYLSK 150
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L NPI+ I + AF + L L+L + + I + AF GL +L +L L +
Sbjct: 151 LKELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLGMCNL 210
Query: 184 TTISGSNILP 193
I N++P
Sbjct: 211 KEIP--NLIP 218
Score = 37 (18.1 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 9/43 (20%), Positives = 20/43 (46%)
Query: 473 NMNTYPSYSISYQIEQNPDLVNDAESVDKDRRAQGGEDTQDTQ 515
++N Y +Y +Y + ++ + RA ++ Q+TQ
Sbjct: 604 HLNHYNAYKTAYNHASTINSIHSSAHEPLLIRASSKDNVQETQ 646
>UNIPROTKB|Q27972 [details] [associations]
symbol:CHAD "Chondroadherin" species:9913 "Bos taurus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
EMBL:U08018 IPI:IPI00711211 PIR:A53860 RefSeq:NP_776444.1
UniGene:Bt.91648 ProteinModelPortal:Q27972 IntAct:Q27972
STRING:Q27972 PRIDE:Q27972 GeneID:281069 KEGG:bta:281069 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 InParanoid:Q27972 KO:K06248
OrthoDB:EOG4K9BCM NextBio:20805150 InterPro:IPR026906 Pfam:PF13306
Uniprot:Q27972
Length = 361
Score = 253 (94.1 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 66/196 (33%), Positives = 96/196 (48%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N +L N ++ L + FQ G +L+ +YLS +S + A + NL N
Sbjct: 150 NLFILQLNNNKIRELRSGAFQ--GAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRN 207
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS-YLVTLELSKCGIEVIEDAAFV 168
L + PS + +L LS NP+K I AFQ YL TL L +E D AF+
Sbjct: 208 QLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFL 267
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI 228
G+ +L+ + L+NN++ + SN L + L +NPW C C L GLRRWLE+ KT
Sbjct: 268 GVTTLKHVHLENNRLHQLP-SNFPFDSLETLTLTNNPWKCTCQLRGLRRWLEA-KTSRP- 324
Query: 229 DPICSVPPRLSSVTIK 244
D C+ P + I+
Sbjct: 325 DATCASPAKFRGQHIR 340
Score = 222 (83.2 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 54/180 (30%), Positives = 89/180 (49%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+A+++ ++ACP +C C Q V C +K + + + T++L+ NN L
Sbjct: 14 LLASLLPALAACPQNCHCH--SDLQHVIC-DKVGLQKIPKVSEKTKLLNLQRNNFPVLAT 70
Query: 67 EKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLM 126
F+ M NL ++L C+I + + AFRGL L+ L SHN ++ + + F D L
Sbjct: 71 NSFRAMP--NLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELT 128
Query: 127 KLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
L L N + ++ G PL L L+L+ I + AF G L WL L N ++++
Sbjct: 129 YLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRSGAFQGAKDLRWLYLSENSLSSL 188
Score = 138 (53.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 39/134 (29%), Positives = 66/134 (49%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L +YLS I V+ + AF LT L L HN + +P +L L L+
Sbjct: 99 GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNN 158
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I+++++GAFQ L L LS+ + ++ A +++L LD N++++ + +
Sbjct: 159 NKIRELRSGAFQGAKDLRWLYLSENSLSSLQPGALDDVENLAKFYLDRNQLSSYPSAALS 218
Query: 193 PTGL-HGIDLHHNP 205
+ + L HNP
Sbjct: 219 KLRVVEELKLSHNP 232
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 104 LDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
L+ N + +++F P+L+ L L I+++ GAF+ L L+ L LS I V+
Sbjct: 58 LNLQRNNFPVLATNSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLR 117
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHN 204
AF L L +L LD+NK+T + + P L + L++N
Sbjct: 118 AGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNN 159
>MGI|MGI:1096866 [details] [associations]
symbol:Chad "chondroadherin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1096866 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001502 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM OMA:CHCHGGD EMBL:U96626 EMBL:BC012672
IPI:IPI00116674 RefSeq:NP_031715.1 UniGene:Mm.440523
ProteinModelPortal:O55226 SMR:O55226 STRING:O55226 PRIDE:O55226
Ensembl:ENSMUST00000040418 GeneID:12643 KEGG:mmu:12643
InParanoid:O55226 NextBio:281844 Bgee:O55226 CleanEx:MM_CHAD
Genevestigator:O55226 GermOnline:ENSMUSG00000039084 Uniprot:O55226
Length = 358
Score = 252 (93.8 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 66/197 (33%), Positives = 94/197 (47%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N +L N ++ L FQ G +L+ +YLS +S + + + NL N
Sbjct: 147 NLFILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGSLDDVENLAKFHLDKN 204
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS-YLVTLELSKCGIEVIEDAAFV 168
L + PS + +L LS NP+K I AFQ YL TL L +E DAAF
Sbjct: 205 QLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFS 264
Query: 169 GLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA 227
G+ +L+ + LDNN++ + S P L + L +NPW C C L GLRRWLE+ +
Sbjct: 265 GVTTLKHVHLDNNRLNQLPSS--FPFDNLETLTLTNNPWKCTCQLRGLRRWLEAKASRP- 321
Query: 228 IDPICSVPPRLSSVTIK 244
D CS P + I+
Sbjct: 322 -DATCSSPAKFKGQRIR 337
Score = 223 (83.6 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 56/190 (29%), Positives = 93/190 (48%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+++ + +A ++ ++ACP +C C G Q V C +K + + + T++L+ NN
Sbjct: 5 LLFSLVFLAILLPALAACPQNCHCH--GDLQHVIC-DKVGLQKIPKVSETTKLLNLQRNN 61
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
L F+ M NL ++L C I + + AFRGL L+ L SHN ++ + + F
Sbjct: 62 FPVLAANSFRTMP--NLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFD 119
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
D L L L N + ++ G PL L L+L+ I + AF G L WL L
Sbjct: 120 DLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSE 179
Query: 181 NKITTIS-GS 189
N ++++ GS
Sbjct: 180 NALSSLQPGS 189
Score = 139 (54.0 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 43/158 (27%), Positives = 74/158 (46%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN L N++ + F+ GL L +YLS I V+ + AF LT L L H
Sbjct: 74 PNLVSLHLQHCNIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDH 131
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + +P +L L L+ N I++++ GAFQ L L LS+ + ++ +
Sbjct: 132 NKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSLQPGSLD 191
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTGL-HGIDLHHNP 205
+++L LD N++++ + + + + L HNP
Sbjct: 192 DVENLAKFHLDKNQLSSYPSAALSKLRVVEELKLSHNP 229
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 104 LDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
L+ N + +++F P+L+ L L I+++ GAF+ L L+ L LS I V+
Sbjct: 55 LNLQRNNFPVLAANSFRTMPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHN 204
AF L L +L LD+NK++ + + P L + L++N
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNN 156
>RGD|69310 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10116 "Rattus
norvegicus" [GO:0001656 "metanephros development" evidence=ISO]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701 "in
utero embryonic development" evidence=ISO] [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0002042
"cell migration involved in sprouting angiogenesis" evidence=ISO]
[GO:0002689 "negative regulation of leukocyte chemotaxis"
evidence=ISO] [GO:0004963 "follicle-stimulating hormone receptor
activity" evidence=IEA] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0006935 "chemotaxis"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO] [GO:0007411
"axon guidance" evidence=ISO] [GO:0007420 "brain development"
evidence=IEP] [GO:0008045 "motor neuron axon guidance" evidence=ISO]
[GO:0008201 "heparin binding" evidence=IEA;ISO] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0010593 "negative
regulation of lamellipodium assembly" evidence=ISO] [GO:0010596
"negative regulation of endothelial cell migration" evidence=ISO]
[GO:0010629 "negative regulation of gene expression" evidence=ISO]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016337 "cell-cell adhesion" evidence=ISO] [GO:0021510 "spinal
cord development" evidence=IEP] [GO:0021772 "olfactory bulb
development" evidence=ISO] [GO:0021836 "chemorepulsion involved in
postnatal olfactory bulb interneuron migration" evidence=ISO]
[GO:0021972 "corticospinal neuron axon guidance through spinal cord"
evidence=ISO] [GO:0022029 "telencephalon cell migration"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030336 "negative regulation of cell migration" evidence=ISO]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=ISO] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=ISO] [GO:0031667 "response to nutrient levels"
evidence=IEP] [GO:0032870 "cellular response to hormone stimulus"
evidence=ISO] [GO:0033563 "dorsal/ventral axon guidance"
evidence=ISO] [GO:0035385 "Roundabout signaling pathway"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0043116 "negative regulation of vascular
permeability" evidence=ISO] [GO:0043237 "laminin-1 binding"
evidence=ISO] [GO:0043394 "proteoglycan binding" evidence=ISO]
[GO:0043395 "heparan sulfate proteoglycan binding" evidence=IDA]
[GO:0045499 "chemorepellent activity" evidence=ISO] [GO:0048495
"Roundabout binding" evidence=ISO] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=ISO] [GO:0048812
"neuron projection morphogenesis" evidence=ISO] [GO:0048846 "axon
extension involved in axon guidance" evidence=ISO] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0050919 "negative chemotaxis" evidence=ISO] [GO:0050929
"induction of negative chemotaxis" evidence=ISO] [GO:0051058
"negative regulation of small GTPase mediated signal transduction"
evidence=ISO] [GO:0051414 "response to cortisol stimulus"
evidence=ISO] [GO:0060603 "mammary gland duct morphogenesis"
evidence=ISO] [GO:0060763 "mammary duct terminal end bud growth"
evidence=ISO] [GO:0061364 "apoptotic process involved in luteolysis"
evidence=ISO] [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=ISO] [GO:0071504 "cellular response to
heparin" evidence=ISO] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=ISO] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=ISO] [GO:0090024
"negative regulation of neutrophil chemotaxis" evidence=ISO]
[GO:0090027 "negative regulation of monocyte chemotaxis"
evidence=IDA] [GO:0090260 "negative regulation of retinal ganglion
cell axon guidance" evidence=ISO] [GO:0090288 "negative regulation
of cellular response to growth factor stimulus" evidence=ISO]
[GO:0021834 "chemorepulsion involved in embryonic olfactory bulb
interneuron precursor migration" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR002272 PRINTS:PR01143 PROSITE:PS51450
RGD:69310 GO:GO:0016021 GO:GO:0005886 GO:GO:0005576 GO:GO:0007420
GO:GO:0030154 GO:GO:0050728 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0008201
GO:GO:0006935 GO:GO:0031667 GO:GO:0042699 GO:GO:0043395
GO:GO:0021510 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0004963 Pfam:PF01463 GO:GO:0090027 HOVERGEN:HBG057959
EMBL:AF141386 IPI:IPI00361914 UniGene:Rn.146652
ProteinModelPortal:Q9WVC1 SMR:Q9WVC1 IntAct:Q9WVC1 STRING:Q9WVC1
PRIDE:Q9WVC1 HOGENOM:HOG000170672 InParanoid:Q9WVC1
ArrayExpress:Q9WVC1 Genevestigator:Q9WVC1
GermOnline:ENSRNOG00000003840 Uniprot:Q9WVC1
Length = 766
Score = 265 (98.3 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 84/254 (33%), Positives = 116/254 (45%)
Query: 7 LIATIIKIVS--ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
L+ +I+ V+ ACP C C G TV+C +L V + NT+ LD GNN+ +
Sbjct: 15 LVLSILNKVAPHACPAQCSCS---GS-TVDCHGLALRIVPRNIPRNTERLDLNGNNITRI 70
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F GL +L+ + L +IS I+ AF L L L + N LQ P F
Sbjct: 71 TKTDFA--GLRHLRILQLMENKISTIERGAFHDLKELERLRLNRNNLQLFPELLFLGTAK 128
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L +L LS N I+ I AF+ + L+L I IED AF L LE L L+NN IT
Sbjct: 129 LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 188
Query: 185 TISGS--NILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVT 242
+S + N +P L LH N CDC L L WL + + + C P L
Sbjct: 189 RLSVASFNHMPK-LRTFRLHSNNLYCDCHLAWLSDWLRQ-RPRVGLYTQCMGPSHLRGHN 246
Query: 243 IKQLSIDELACEPQ 256
+ ++ E C +
Sbjct: 247 VAEVQKREFVCSDE 260
Score = 172 (65.6 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 46/178 (25%), Positives = 89/178 (50%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ +V+++ F+ L L ++ S+N + + F + ++ L+ N ++
Sbjct: 533 ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLEN 592
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
++ F+ L L TL L I + + +F GL S+ L L +N+ITT++ G+ L
Sbjct: 593 VQHKMFKGLESLKTLMLRSNRISCVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSL 652
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ ++I + C+
Sbjct: 653 STLNLLANPFNCNCHLAWLGEWLRR-KRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 709
Score = 166 (63.5 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 53/178 (29%), Positives = 81/178 (45%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I VI AF L LD S+N + + D F SL L L GN I
Sbjct: 306 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 365
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTG 195
++ F+ L L L L+ I + AF L +L L L +NK+ T++ G+
Sbjct: 366 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 425
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ + L NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 426 IQTMHLAQNPFICDCHLKWLADYLHTNPIETS-GARCTSPRRLANKRIGQIKSKKFRC 482
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 49/162 (30%), Positives = 69/162 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C+ G TV+C N+ L + + + T L N L K L
Sbjct: 501 ACPEKCRCE--G--TTVDCSNQKLNKIPDHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 555
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI LS +I+ I+ AF G + + ++ + N L+ V F SL L L N I
Sbjct: 556 LRKINLSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 615
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
+ +F L + L L I + AF L SL L L
Sbjct: 616 CVGNDSFTGLGSVRLLSLYDNQITTVAPGAFGTLHSLSTLNL 657
>UNIPROTKB|A6NDA9 [details] [associations]
symbol:LRIT2 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR020901
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:AC022389 CTD:340745 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
EMBL:BX648524 IPI:IPI01015843 RefSeq:NP_001017924.1
UniGene:Hs.450425 ProteinModelPortal:A6NDA9 SMR:A6NDA9 PRIDE:A6NDA9
Ensembl:ENST00000372113 GeneID:340745 KEGG:hsa:340745
UCSC:uc001kcy.3 GeneCards:GC10M085971 HGNC:HGNC:23443 HPA:HPA037788
neXtProt:NX_A6NDA9 PharmGKB:PA162394344 eggNOG:NOG331103
InParanoid:A6NDA9 GenomeRNAi:340745 NextBio:98010
ArrayExpress:A6NDA9 Bgee:A6NDA9 CleanEx:HS_LRIT2
Genevestigator:A6NDA9 Uniprot:A6NDA9
Length = 550
Score = 261 (96.9 bits), Expect = 3.3e-19, P = 3.3e-19
Identities = 96/341 (28%), Positives = 149/341 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
C C C + +T++C + SL + + + + + L + F M L
Sbjct: 24 CLPGCTCSEESFGRTLQCTSVSLGKIPGNLSEEFKQVRIENSPLFEMPQGSFINMS--TL 81
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ ++L+ ISVI A L L +L N L +VP F P L L L N I
Sbjct: 82 EYLWLNFNNISVIHLGALEHLPELRELRLEGNKLCSVPWTAFRATPLLRVLDLKRNKIDA 141
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLH 197
+ A Q L L L+LS + V+ + F L W + G+ IL + +
Sbjct: 142 LPELALQFLVSLTYLDLSSNRLTVVSKSVF-----LNWPAYQKCRQPDC-GAEILSSLV- 194
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP---ICSVPPRLSSVTIKQLSIDELAC- 253
+ LH NPW CDC L GL ++++S P+ + IC P + + + AC
Sbjct: 195 -VALHDNPWVCDCRLRGLVQFVKSITLPVILVNSYLICQGPLSKAGQLFHETELS--ACM 251
Query: 254 EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEE 313
+PQI+ + + I+ G+NV+L C A P I W + P+ SM ST E
Sbjct: 252 KPQISTPSANITIRAGQNVTLRCLAQASPSPSIAWTY---PL---SMWREFDVLTSSTGE 305
Query: 314 GTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
T + SEL I +++ D+G + C+A N G SN I +
Sbjct: 306 DTAL--SELAIPAAHLVDSGNYTCMASNSIGK--SNLVISL 342
>ZFIN|ZDB-GENE-010306-3 [details] [associations]
symbol:slit2 "slit (Drosophila) homolog 2"
species:7955 "Danio rerio" [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0033564
"anterior/posterior axon guidance" evidence=IMP] [GO:0007414
"axonal defasciculation" evidence=IMP] [GO:0001763 "morphogenesis
of a branching structure" evidence=IMP] [GO:0003262 "endocardial
progenitor cell migration to the midline involved in heart field
formation" evidence=IGI] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0030517 "negative regulation of axon extension"
evidence=IGI;IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152
ZFIN:ZDB-GENE-010306-3 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0030517 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 HSSP:P00740 Pfam:PF12661 GO:GO:0001763
GO:GO:0007414 Pfam:PF01463 GO:GO:0033564 HOGENOM:HOG000116120
HOVERGEN:HBG057959 CTD:9353 KO:K06839 OrthoDB:EOG4D7Z4T
GO:GO:0003262 EMBL:AF210321 EMBL:CU638813 IPI:IPI00491594
RefSeq:NP_571810.1 UniGene:Dr.10489 SMR:Q9DE36 IntAct:Q9DE36
GeneID:80353 KEGG:dre:80353 NextBio:20934061 Uniprot:Q9DE36
Length = 1512
Score = 276 (102.2 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 85/255 (33%), Positives = 118/255 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP+ C C G V+C +SL +V + N + LD NNL + F GL N
Sbjct: 20 SCPSQCSCS---GT-AVDCHGQSLRSVPRNIPRNVERLDLNANNLTKITKADFA--GLKN 73
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ + L +IS I+ AF+ L L L + N LQ +P F L +L LS N I+
Sbjct: 74 LRVLQLMENKISSIERGAFQDLQELERLRLNRNNLQVLPELLFLGTTKLFRLDLSENQIQ 133
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS--NILPT 194
I AF+ + + L+L I IED AF L LE L L+NN I+ +S + N +P
Sbjct: 134 GIPRKAFRGSTEIKNLQLDYNQISCIEDGAFRALGDLEVLTLNNNNISRLSVASFNHMPK 193
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
L LH N CDC + L WL + + + C PP L I ++ E C
Sbjct: 194 -LRTFRLHSNNLLCDCNVAWLSDWLRQ-RPRLGLYTQCMAPPSLRGHNIAEVQKKEFMCT 251
Query: 255 -PQITPSTFYLEIQE 268
PQ S L+ E
Sbjct: 252 GPQSHSSCSVLQCPE 266
Score = 176 (67.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 48/178 (26%), Positives = 88/178 (49%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ +V+++ F+ L L ++ S+N + + TF + +L L+ N ++
Sbjct: 520 ELRLNNNEFTVLEATGIFKKLPQLRKINLSNNKITDIEEGTFEGASGVNELILTSNRLEG 579
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
+ + L L TL L I + + +F GL S+ L L +N IT++S G+ L
Sbjct: 580 VHYSMLKGLGGLRTLMLRSNRISCVNNGSFTGLSSVRLLSLYDNLITSMSPGAFDTLHSL 639
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ +++ + ACE
Sbjct: 640 STLNLLANPFNCNCHLAWLGEWLRK-KRIVTGNPRCQSPYFLKEIPIQDVAVQDFACE 696
Score = 175 (66.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 53/178 (29%), Positives = 84/178 (47%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I +I + AF L +D S+N + + SD+F SL L L GN I
Sbjct: 293 ITEIRLEQNSIKIIPAGAFAPYKRLRRIDLSNNQITELASDSFQGLRSLNSLVLYGNKIT 352
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTG 195
++ G F L L L L+ I + +F L +L L L +NK+ TI+ G+
Sbjct: 353 ELPKGLFDGLFSLQLLLLNANKINCLRVDSFQDLQNLNLLSLYDNKLQTIAKGTFSSLRA 412
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ + L NP+ CDC L L +L+ + C+ P RL++ I Q+ + C
Sbjct: 413 IQTLHLAQNPFMCDCHLKWLADYLQDNPIETS-GARCTSPRRLANKRIGQIKSKKFRC 469
Score = 145 (56.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 43/140 (30%), Positives = 65/140 (46%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
++ CP C C V C NK L + +G+ + L GN + +
Sbjct: 707 LARCPAECSCL----DTVVRCSNKGLKVLPKGIPRDVTELYLDGNEFTQV---PLELSNY 759
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L I LS +IS + + +F ++ L+ L S+N L+ +P+ F SL L+L GN
Sbjct: 760 KHLTLIDLSNNQISTLSNHSFSNMSELLTLILSYNRLRCIPAKAFDGLKSLRLLSLHGND 819
Query: 135 IKQIKTGAFQPLSYLVTLEL 154
I I GAF+ LS L L L
Sbjct: 820 IAVIPDGAFKDLSSLSHLAL 839
Score = 44 (20.5 bits), Expect = 3.3e-19, Sum P(2) = 3.3e-19
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 435 NATSATCMDKVNGGYIIADGHNDMMLYATDSGILVATNNMNTYPSYSISYQIEQ-NPDLV 493
N + D+ NG ++ G N+ + G L + + +YP +I Y +E N
Sbjct: 1166 NISLQIATDEDNG-VLLYKGDNEHIAVELYRGRLRVSYDSGSYPPSAI-YSVETINDGSF 1223
Query: 494 NDAESVDKDR 503
+ E V KD+
Sbjct: 1224 HVVELVAKDQ 1233
Score = 38 (18.4 bits), Expect = 1.4e-18, Sum P(2) = 1.4e-18
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 439 ATCMDKVNGGYIIA-DGHNDMMLYATDSGILVATNNMNTY 477
A C+D VNG + +G++ + + +L T+ + Y
Sbjct: 1072 AQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDHY 1111
>UNIPROTKB|I3LDA4 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0020037 "heme binding" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0004601
"peroxidase activity" evidence=IEA] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006979 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10
GeneTree:ENSGT00550000074325 CTD:7837 OMA:EPVITWN EMBL:FP102546
EMBL:FP565715 RefSeq:XP_003125453.3 Ensembl:ENSSSCT00000022979
GeneID:100516076 KEGG:ssc:100516076 Uniprot:I3LDA4
Length = 1479
Score = 267 (99.0 bits), Expect = 4.2e-19, P = 4.2e-19
Identities = 86/274 (31%), Positives = 137/274 (50%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I AF+GL NL L ++N ++++PS +F D +L L L N I+ I AFQ
Sbjct: 73 RIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAFQG 132
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGS-NILPTGLHGIDLHH 203
L+ L L L IE ++ +F L LE L L NN+IT + G+ N L + + + L
Sbjct: 133 LASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLVPGTFNHLES-MKRLRLDS 191
Query: 204 NPWTCDCLLIGLRRWLES-TKTPMA-IDPICSVPPRLSSVTIKQLSIDELACE-PQITPS 260
N CDC ++ L L++ ++ A C P R+ ++ ++ +EL CE P+IT
Sbjct: 192 NALRCDCEILWLADLLKTYARSGNAQAAATCEYPRRIQGRSVATITPEELDCERPRITSE 251
Query: 261 TFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKS 320
++ G V C+ P+ +I WL + NE A++S + ++GT
Sbjct: 252 PQDADVTLGNTVFFTCRAEGNPKPEIIWLRNN----NELSMAADSR-LNLLDDGT----- 301
Query: 321 ELLIYNSNIDDNGTFVCVAENQAGSTSSN-YTIR 353
L+I N+ D G + C+A+N AG + T+R
Sbjct: 302 -LMIQNTREADQGVYQCMAKNVAGEAKTQGVTLR 334
Score = 179 (68.1 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 54/180 (30%), Positives = 85/180 (47%)
Query: 4 WIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
W L K + CP+ C+C + TV C++ L+ V + P T +LD N ++
Sbjct: 22 WGVLAVVAQKPGNGCPSRCLCF----RTTVRCMHL-LLEAVPAVAPQTSILDLRFNRIRE 76
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
+ F+ GL NL + L+ +I I S +F L NL L N +Q++ F
Sbjct: 77 IQPGAFK--GLRNLNTLLLNNNQIKSIPSGSFEDLENLKYLYLYKNEIQSIDRQAFQGLA 134
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
SL +L L N I+ + +FQ L L L L I + F L+S++ L+LD+N +
Sbjct: 135 SLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITYLVPGTFNHLESMKRLRLDSNAL 194
Score = 136 (52.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 50/143 (34%), Positives = 73/143 (51%)
Query: 84 RCRISVIDS-KAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGA 142
RC ++++ A T+++DL F N ++ + F +L L L+ N IK I +G+
Sbjct: 48 RCMHLLLEAVPAVAPQTSILDLRF--NRIREIQPGAFKGLRNLNTLLLNNNQIKSIPSGS 105
Query: 143 FQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGID 200
F+ L L L L K I+ I+ AF GL SLE L L N+I T+ + LP L +
Sbjct: 106 FEDLENLKYLYLYKNEIQSIDRQAFQGLASLEQLYLHFNQIETLDPESFQHLPK-LERLF 164
Query: 201 LHHNPWTCDCLLIGLRRWLESTK 223
LH+N T L+ G LES K
Sbjct: 165 LHNNRITY--LVPGTFNHLESMK 185
Score = 83 (34.3 bits), Expect = 8.1e-13, Sum P(2) = 8.1e-13
Identities = 29/96 (30%), Positives = 41/96 (42%)
Query: 259 PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIK 318
PS E+ G +V L C PE ITW DGV + +ES + + EG
Sbjct: 531 PSDVTAEV--GSSVQLPCSSQGEPEPAITWNKDGVQV-------TESGKFHISPEGF--- 578
Query: 319 KSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
L I++ D G + CVA N G S + + +
Sbjct: 579 ---LTIHDVGTADAGRYECVARNTMGQASVSMLLSV 611
Score = 76 (31.8 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 27/91 (29%), Positives = 37/91 (40%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
PQ T + + EG+ V C+ P+ I W G P+ S H V S+ G
Sbjct: 433 PQFTVTPQDRAVTEGQTVDFHCEAKGYPQPVIAWTKGGSPL-----SVDRRHLVLSS--G 485
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
T L I + + D G + C A N GS
Sbjct: 486 T------LRISSVALHDQGQYECQAVNIIGS 510
Score = 66 (28.3 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 23/83 (27%), Positives = 37/83 (44%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQ-NESMSASESHAVYSTEEGTEIKKSEL 322
E+ G++V+L C + P +ITW DG P+ + +S + S +Y
Sbjct: 352 EVLVGESVTLECSATGHPPPRITWTRGDGTPVPVDPRVSITPSGGLY------------- 398
Query: 323 LIYNSNIDDNGTFVCVAENQAGS 345
I N +D+G + C A N S
Sbjct: 399 -IQNVVQEDSGEYTCFAANTVDS 420
Score = 54 (24.1 bits), Expect = 8.0e-10, Sum P(2) = 8.0e-10
Identities = 29/115 (25%), Positives = 44/115 (38%)
Query: 176 LKLDNNKITTISGS-NILPTGLHGIDLHHNPWTCDCL-LIGLRRWLESTKTPMAIDPI-C 232
L +D + SG+ I LH + C + +IG +R + P+
Sbjct: 473 LSVDRRHLVLSSGTLRISSVALHD----QGQYECQAVNIIGSQRVTAHLTVQARVTPVFA 528
Query: 233 SVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT 287
SVP S VT + S +L C Q P ++G V+ K PE +T
Sbjct: 529 SVP---SDVTAEVGSSVQLPCSSQGEPEPAITWNKDGVQVTESGKFHISPEGFLT 580
>RGD|2336 [details] [associations]
symbol:Chad "chondroadherin" species:10116 "Rattus norvegicus"
[GO:0001502 "cartilage condensation" evidence=IEP] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] InterPro:IPR001611
PROSITE:PS51450 RGD:2336 GO:GO:0005578 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0001502 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 OrthoDB:EOG4K9BCM
OMA:CHCHGGD EMBL:AF004953 IPI:IPI00196534 RefSeq:NP_062037.1
UniGene:Rn.9899 ProteinModelPortal:O70210 STRING:O70210
Ensembl:ENSRNOT00000004435 GeneID:29195 KEGG:rno:29195 UCSC:RGD:2336
GeneTree:ENSGT00700000104056 InParanoid:O70210 NextBio:608331
Genevestigator:O70210 GermOnline:ENSRNOG00000003304 Uniprot:O70210
Length = 358
Score = 249 (92.7 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 65/197 (32%), Positives = 95/197 (48%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N +L N ++ L FQ G +L+ +YLS ++ + + + NL N
Sbjct: 147 NLFILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALTSLHPGSLDDVENLAKFHLDRN 204
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS-YLVTLELSKCGIEVIEDAAFV 168
L + PS + +L LS NP+K I AFQ YL TL L +E DAAF
Sbjct: 205 QLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDAAFA 264
Query: 169 GLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA 227
G+ +L+ + L+NN++ + + P L + L +NPW C C L GLRRWLE+ KT
Sbjct: 265 GVTTLKHVHLENNRLNQLPST--FPFDNLETLTLTNNPWKCTCQLRGLRRWLEA-KTSRP 321
Query: 228 IDPICSVPPRLSSVTIK 244
D CS P + I+
Sbjct: 322 -DATCSSPAKFKGQRIR 337
Score = 219 (82.2 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 56/182 (30%), Positives = 89/182 (48%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+FL A ++ ++ACP +C C G Q V C +K + + + T++L+ NN L
Sbjct: 10 VFL-AILLPALAACPQNCHCH--GDLQHVIC-DKVGLQKIPKVSETTKLLNLQRNNFPVL 65
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+ + NL ++L C I + + AFRGL L+ L SHN ++ + + F D
Sbjct: 66 AANSFRTVP--NLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTE 123
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L N + ++ G PL L L+L+ I + AF G L WL L N +T
Sbjct: 124 LTYLYLDHNKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALT 183
Query: 185 TI 186
++
Sbjct: 184 SL 185
Score = 136 (52.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 43/158 (27%), Positives = 73/158 (46%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN L N++ + F+ GL L +YLS I V+ + AF LT L L H
Sbjct: 74 PNLVSLHLQHCNIREVAAGAFR--GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDH 131
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + +P +L L L+ N I++++ GAFQ L L LS+ + + +
Sbjct: 132 NKVSELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALTSLHPGSLD 191
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTGL-HGIDLHHNP 205
+++L LD N++++ + + + + L HNP
Sbjct: 192 DVENLAKFHLDRNQLSSYPSAALSKLRVVEELKLSHNP 229
Score = 118 (46.6 bits), Expect = 0.00073, P = 0.00073
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 104 LDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
L+ N + +++F P+L+ L L I+++ GAF+ L L+ L LS I V+
Sbjct: 55 LNLQRNNFPVLAANSFRTVPNLVSLHLQHCNIREVAAGAFRGLKQLIYLYLSHNDIRVLR 114
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHN 204
AF L L +L LD+NK++ + + P L + L++N
Sbjct: 115 AGAFDDLTELTYLYLDHNKVSELPRGLLSPLVNLFILQLNNN 156
>UNIPROTKB|O15335 [details] [associations]
symbol:CHAD "Chondroadherin" species:9606 "Homo sapiens"
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=TAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0001558 "regulation of cell growth" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0001558 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 EMBL:CH471109 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001502 GO:GO:0005201 CTD:1101
HOGENOM:HOG000013150 HOVERGEN:HBG005324 KO:K06248 EMBL:U96769
EMBL:U96767 EMBL:U96768 EMBL:AF371328 EMBL:AK292177 EMBL:BC036360
EMBL:BC073974 IPI:IPI00014592 RefSeq:NP_001258.2 UniGene:Hs.97220
ProteinModelPortal:O15335 SMR:O15335 STRING:O15335 PRIDE:O15335
Ensembl:ENST00000258969 Ensembl:ENST00000508540 GeneID:1101
KEGG:hsa:1101 UCSC:uc010dbr.3 GeneCards:GC17M048541 HGNC:HGNC:1909
HPA:HPA018241 MIM:602178 neXtProt:NX_O15335 PharmGKB:PA26445
InParanoid:O15335 OMA:CHCHGGD PhylomeDB:O15335 GenomeRNAi:1101
NextBio:4554 Bgee:O15335 CleanEx:HS_CHAD Genevestigator:O15335
GermOnline:ENSG00000136457 Uniprot:O15335
Length = 359
Score = 248 (92.4 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 64/196 (32%), Positives = 94/196 (47%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N +L N ++ L FQ G +L+ +YLS +S + A + NL N
Sbjct: 148 NLFILQLNNNKIRELRAGAFQ--GAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRN 205
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS-YLVTLELSKCGIEVIEDAAFV 168
L + PS + +L LS NP+K I AFQ YL TL L +E D AF+
Sbjct: 206 QLSSYPSAALSKLRVVEELKLSHNPLKSIPDNAFQSFGRYLETLWLDNTNLEKFSDGAFL 265
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI 228
G+ +L+ + L+NN++ + SN L + L +NPW C C L GLRRWLE+ +
Sbjct: 266 GVTTLKHVHLENNRLNQLP-SNFPFDSLETLALTNNPWKCTCQLRGLRRWLEAKASRP-- 322
Query: 229 DPICSVPPRLSSVTIK 244
D C+ P + I+
Sbjct: 323 DATCASPAKFKGQHIR 338
Score = 214 (80.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 54/180 (30%), Positives = 88/180 (48%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+A ++ ++ACP +C C Q V C +K + + + T++L+ NN L
Sbjct: 12 LLAGLLPALAACPQNCHCH--SDLQHVIC-DKVGLQKIPKVSEKTKLLNLQRNNFPVLAA 68
Query: 67 EKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLM 126
F+ M NL ++L C+I + + AFRGL L+ L SHN ++ + + F D L
Sbjct: 69 NSFRAMP--NLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLRAGAFDDLTELT 126
Query: 127 KLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
L L N + ++ G PL L L+L+ I + AF G L WL L N ++++
Sbjct: 127 YLYLDHNKVTELPRGLLSPLVNLFILQLNNNKIRELRAGAFQGAKDLRWLYLSENALSSL 186
Score = 135 (52.6 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 38/134 (28%), Positives = 65/134 (48%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L +YLS I V+ + AF LT L L HN + +P +L L L+
Sbjct: 97 GLKQLIYLYLSHNDIRVLRAGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNN 156
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I++++ GAFQ L L LS+ + ++ A +++L +D N++++ + +
Sbjct: 157 NKIRELRAGAFQGAKDLRWLYLSENALSSLQPGALDDVENLAKFHVDRNQLSSYPSAALS 216
Query: 193 PTGL-HGIDLHHNP 205
+ + L HNP
Sbjct: 217 KLRVVEELKLSHNP 230
Score = 122 (48.0 bits), Expect = 0.00027, P = 0.00027
Identities = 32/102 (31%), Positives = 53/102 (51%)
Query: 104 LDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
L+ N + +++F P+L+ L L I+++ GAF+ L L+ L LS I V+
Sbjct: 56 LNLQRNNFPVLAANSFRAMPNLVSLHLQHCQIREVAAGAFRGLKQLIYLYLSHNDIRVLR 115
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHN 204
AF L L +L LD+NK+T + + P L + L++N
Sbjct: 116 AGAFDDLTELTYLYLDHNKVTELPRGLLSPLVNLFILQLNNN 157
>MGI|MGI:3027390 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B"
species:10090 "Mus musculus" [GO:0005102 "receptor binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IDA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:3027390
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 HOVERGEN:HBG052359 KO:K16360 OMA:NNTTCCA
OrthoDB:EOG4W9J3K PANTHER:PTHR24369:SF7 EMBL:BC060263 EMBL:AK140418
IPI:IPI00381059 RefSeq:NP_937893.1 UniGene:Mm.44173 PDB:3ZYN
PDB:3ZYO PDBsum:3ZYN PDBsum:3ZYO ProteinModelPortal:P0C192
SMR:P0C192 IntAct:P0C192 STRING:P0C192 PhosphoSite:P0C192
PaxDb:P0C192 PRIDE:P0C192 Ensembl:ENSMUST00000058667 GeneID:272381
KEGG:mmu:272381 UCSC:uc009gpj.1 InParanoid:P0C192
EvolutionaryTrace:P0C192 NextBio:393574 Bgee:P0C192
CleanEx:MM_LRRC4B Genevestigator:P0C192
GermOnline:ENSMUSG00000047085 Uniprot:P0C192
Length = 709
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/330 (26%), Positives = 148/330 (44%)
Query: 32 TVECVNKSLITV-VEGMDPNTQVLD-YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L TV + + +++ + + NN ++++ + F ++ +L+++ L R+
Sbjct: 140 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 197
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
I AF GL NL L+ L+ +P+ T L +L LSGN + I+ G+FQ L+
Sbjct: 198 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLT 255
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
L L L + IE AF L SLE L L +N + ++ P L + L+HNPW
Sbjct: 256 SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 315
Query: 207 TCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL+ T + C P L I +L C P I L
Sbjct: 316 HCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDL 375
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ + WL P N ++ +H Y + L
Sbjct: 376 NVTEGMAAELKCRTGT-SMTSVNWL---TP--NGTLM---THGSYRVRISV-LHDGTLNF 425
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D G + C+ N AG+T+++ T+ +
Sbjct: 426 TNVTVQDTGQYTCMVTNSAGNTTASATLNV 455
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 52/164 (31%), Positives = 86/164 (52%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP +C C + + V C + L V + NT+ L+ N+++ + + F+ L
Sbjct: 57 TSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKH--LR 112
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ + I+ AF GL +L L+ N L TVP+ F L +L L NPI
Sbjct: 113 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 172
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
+ I + AF + L L+L + +E I +AAF GL +L +L L
Sbjct: 173 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216
>RGD|1307121 [details] [associations]
symbol:Lrrc4b "leucine rich repeat containing 4B" species:10116
"Rattus norvegicus" [GO:0005102 "receptor binding"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0042734 "presynaptic membrane"
evidence=IEA] [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA;ISO] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 RGD:1307121
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042734 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030
HOGENOM:HOG000252924 KO:K16360 OMA:NNTTCCA OrthoDB:EOG4W9J3K
PANTHER:PTHR24369:SF7 EMBL:CB608563 IPI:IPI00367477
RefSeq:NP_001258010.1 RefSeq:XP_001077685.1 UniGene:Rn.22207
ProteinModelPortal:P0CC10 STRING:P0CC10 PRIDE:P0CC10
Ensembl:ENSRNOT00000026259 GeneID:308571 KEGG:rno:308571
UCSC:RGD:1307121 NextBio:659144 Uniprot:P0CC10
Length = 709
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/330 (26%), Positives = 148/330 (44%)
Query: 32 TVECVNKSLITV-VEGMDPNTQVLD-YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L TV + + +++ + + NN ++++ + F ++ +L+++ L R+
Sbjct: 140 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 197
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
I AF GL NL L+ L+ +P+ T L +L LSGN + I+ G+FQ L+
Sbjct: 198 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLT 255
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
L L L + IE AF L SLE L L +N + ++ P L + L+HNPW
Sbjct: 256 SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 315
Query: 207 TCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL+ T + C P L I +L C P I L
Sbjct: 316 HCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDL 375
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ + WL P N ++ +H Y + L
Sbjct: 376 NVTEGMAAELKCRTGT-SMTSVNWL---TP--NGTLM---THGSYRVRISV-LHDGTLNF 425
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D G + C+ N AG+T+++ T+ +
Sbjct: 426 TNVTVQDTGQYTCMVTNSAGNTTASATLNV 455
Score = 194 (73.4 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 52/164 (31%), Positives = 86/164 (52%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP +C C + + V C + L V + NT+ L+ N+++ + + F+ L
Sbjct: 57 TSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENSIQVIRTDTFKH--LR 112
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ + I+ AF GL +L L+ N L TVP+ F L +L L NPI
Sbjct: 113 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 172
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
+ I + AF + L L+L + +E I +AAF GL +L +L L
Sbjct: 173 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 216
>UNIPROTKB|E1BPK8 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360 OMA:NNTTCCA
PANTHER:PTHR24369:SF7 EMBL:DAAA02047507 IPI:IPI00733296
RefSeq:NP_001179210.1 UniGene:Bt.88262 ProteinModelPortal:E1BPK8
Ensembl:ENSBTAT00000043330 GeneID:539607 KEGG:bta:539607
NextBio:20878103 ArrayExpress:E1BPK8 Uniprot:E1BPK8
Length = 711
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/330 (26%), Positives = 148/330 (44%)
Query: 32 TVECVNKSLITV-VEGMDPNTQVLD-YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L TV + + +++ + + NN ++++ + F ++ +L+++ L R+
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 195
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
I AF GL NL L+ L+ +P+ T L +L LSGN + I+ G+FQ L+
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLT 253
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
L L L + IE AF L SLE L L +N + ++ P L + L+HNPW
Sbjct: 254 SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 313
Query: 207 TCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL+ T + C P L I +L C P I L
Sbjct: 314 HCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDL 373
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ + WL P N ++ +H Y + L
Sbjct: 374 NVTEGMAAELKCRTGT-SMTSVNWL---TP--NGTLM---THGSYRVRISV-LHDGTLNF 423
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D G + C+ N AG+T+++ T+ +
Sbjct: 424 TNVTVQDTGQYTCMVTNSAGNTTASATLNV 453
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP +C C + + V C + L V + NT+ L+ N ++ + + F+ L
Sbjct: 55 TSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ + I+ AF GL +L L+ N L TVP+ F L +L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
+ I + AF + L L+L + +E I +AAF GL +L +L L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
>UNIPROTKB|Q9NT99 [details] [associations]
symbol:LRRC4B "Leucine-rich repeat-containing protein 4B"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042734 "presynaptic
membrane" evidence=IEA] [GO:0051965 "positive regulation of synapse
assembly" evidence=ISS] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042734
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:AC008743 InterPro:IPR026906
Pfam:PF13306 EMBL:BC019687 EMBL:BC056207 EMBL:AL137451
IPI:IPI00300241 PIR:T46266 RefSeq:NP_001073926.1 UniGene:Hs.120873
ProteinModelPortal:Q9NT99 SMR:Q9NT99 STRING:Q9NT99
PhosphoSite:Q9NT99 DMDM:91207142 PaxDb:Q9NT99 PRIDE:Q9NT99
DNASU:94030 Ensembl:ENST00000389201 GeneID:94030 KEGG:hsa:94030
UCSC:uc002pss.3 CTD:94030 GeneCards:GC19M051020 H-InvDB:HIX0015363
HGNC:HGNC:25042 neXtProt:NX_Q9NT99 PharmGKB:PA134890612
HOGENOM:HOG000252924 HOVERGEN:HBG052359 InParanoid:Q9NT99 KO:K16360
OMA:NNTTCCA OrthoDB:EOG4W9J3K ChiTaRS:LRRC4B GenomeRNAi:94030
NextBio:78327 ArrayExpress:Q9NT99 Bgee:Q9NT99 CleanEx:HS_LRRC4B
Genevestigator:Q9NT99 GermOnline:ENSG00000131409
PANTHER:PTHR24369:SF7 Uniprot:Q9NT99
Length = 713
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/330 (26%), Positives = 148/330 (44%)
Query: 32 TVECVNKSLITV-VEGMDPNTQVLD-YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L TV + + +++ + + NN ++++ + F ++ +L+++ L R+
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 195
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
I AF GL NL L+ L+ +P+ T L +L LSGN + I+ G+FQ L+
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLT 253
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
L L L + IE AF L SLE L L +N + ++ P L + L+HNPW
Sbjct: 254 SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 313
Query: 207 TCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL+ T + C P L I +L C P I L
Sbjct: 314 HCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDL 373
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ + WL P N ++ +H Y + L
Sbjct: 374 NVTEGMAAELKCRTGT-SMTSVNWL---TP--NGTLM---THGSYRVRISV-LHDGTLNF 423
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D G + C+ N AG+T+++ T+ +
Sbjct: 424 TNVTVQDTGQYTCMVTNSAGNTTASATLNV 453
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP +C C + + V C + L V + NT+ L+ N ++ + + F+ L
Sbjct: 55 TSCPVACSCSNQASR--VICTRRDLAEVPASIPVNTRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ + I+ AF GL +L L+ N L TVP+ F L +L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
+ I + AF + L L+L + +E I +AAF GL +L +L L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
>UNIPROTKB|F1PZW2 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051965 "positive regulation of synapse
assembly" evidence=IEA] [GO:0005102 "receptor binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
InterPro:IPR026883 PROSITE:PS50835 PROSITE:PS51450
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 CTD:94030 KO:K16360
OMA:NNTTCCA PANTHER:PTHR24369:SF7 EMBL:AAEX03000782
EMBL:AAEX03000783 EMBL:AAEX03000784 EMBL:AAEX03000785
EMBL:AAEX03000786 RefSeq:XP_541477.2 Ensembl:ENSCAFT00000004749
GeneID:484361 KEGG:cfa:484361 Uniprot:F1PZW2
Length = 717
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/330 (26%), Positives = 148/330 (44%)
Query: 32 TVECVNKSLITV-VEGMDPNTQVLD-YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L TV + + +++ + + NN ++++ + F ++ +L+++ L R+
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 195
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
I AF GL NL L+ L+ +P+ T L +L LSGN + I+ G+FQ L+
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLT 253
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
L L L + IE AF L SLE L L +N + ++ P L + L+HNPW
Sbjct: 254 SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 313
Query: 207 TCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL+ T + C P L I +L C P I L
Sbjct: 314 HCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDL 373
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ + WL P N ++ +H Y + L
Sbjct: 374 NVTEGMAAELKCRTGT-SMTSVNWL---TP--NGTLM---THGSYRVRISV-LHDGTLNF 423
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D G + C+ N AG+T+++ T+ +
Sbjct: 424 TNVTVQDTGQYTCMVTNSAGNTTASATLNV 453
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP +C C + + V C + L V + NT+ L+ N ++ + + F+ L
Sbjct: 55 TSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ + I+ AF GL +L L+ N L TVP+ F L +L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
+ I + AF + L L+L + +E I +AAF GL +L +L L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
>UNIPROTKB|I3LJI7 [details] [associations]
symbol:LRRC4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051965 "positive regulation of synapse assembly"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 InterPro:IPR026883
PROSITE:PS50835 PROSITE:PS51450 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 OMA:NNTTCCA PANTHER:PTHR24369:SF7
EMBL:FP102476 EMBL:FP102472 Ensembl:ENSSSCT00000029477
Uniprot:I3LJI7
Length = 721
Score = 258 (95.9 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 89/330 (26%), Positives = 148/330 (44%)
Query: 32 TVECVNKSLITV-VEGMDPNTQVLD-YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRC-RI 87
T+E + L TV + + +++ + + NN ++++ + F ++ +L+++ L R+
Sbjct: 138 TLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVP--SLRRLDLGELKRL 195
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
I AF GL NL L+ L+ +P+ T L +L LSGN + I+ G+FQ L+
Sbjct: 196 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTA--LVRLEELELSGNRLDLIRPGSFQGLT 253
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW 206
L L L + IE AF L SLE L L +N + ++ P L + L+HNPW
Sbjct: 254 SLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPW 313
Query: 207 TCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPSTFYL 264
C+C ++ L WL+ T + C P L I +L C P I L
Sbjct: 314 HCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAPVIVEPPTDL 373
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG L C+ + WL P N ++ +H Y + L
Sbjct: 374 NVTEGMAAELKCRTGT-SMTSVNWL---TP--NGTLM---THGSYRVRISV-LHDGTLNF 423
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N + D G + C+ N AG+T+++ T+ +
Sbjct: 424 TNVTVQDTGQYTCMVTNSAGNTTASATLNV 453
Score = 193 (73.0 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 52/164 (31%), Positives = 85/164 (51%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP +C C + + V C + L V + NT+ L+ N ++ + + F+ L
Sbjct: 55 TSCPAACSCSNQASR--VICTRRELAEVPASIPVNTRYLNLQENGIQVIRTDTFKH--LR 110
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ + I+ AF GL +L L+ N L TVP+ F L +L L NPI
Sbjct: 111 HLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPI 170
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
+ I + AF + L L+L + +E I +AAF GL +L +L L
Sbjct: 171 ESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNL 214
>MGI|MGI:2442845 [details] [associations]
symbol:Lrrc38 "leucine rich repeat containing 38"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005216 "ion channel activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006811 "ion transport" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:2442845 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR000483 SMART:SM00082 GO:GO:0005216 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 CTD:126755 HOGENOM:HOG000113369
HOVERGEN:HBG094920 OMA:LDEIQCS OrthoDB:EOG4GMTXN EMBL:AL611982
EMBL:BC129963 EMBL:AK045936 EMBL:AK160116 IPI:IPI00938501
RefSeq:NP_001156455.1 UniGene:Mm.94020 ProteinModelPortal:A2VDH3
SMR:A2VDH3 PRIDE:A2VDH3 Ensembl:ENSMUST00000052458 GeneID:242735
KEGG:mmu:242735 UCSC:uc008vqb.2 GeneTree:ENSGT00700000104451
InParanoid:A2VDH3 NextBio:385532 Bgee:A2VDH3 CleanEx:MM_LRRC38
Genevestigator:A2VDH3 Uniprot:A2VDH3
Length = 298
Score = 234 (87.4 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 66/222 (29%), Positives = 116/222 (52%)
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
++++K+ ++ RI I F +LV LDF +N L+++ TF L L LS N
Sbjct: 60 LDVRKLLVAGNRIQQIPEDFFIFHGDLVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNN 119
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT--ISGSNIL 192
+ Q+ GAF+ LV L L+ + + +AAF L+SL+ L+L++N + + ++ + L
Sbjct: 120 LTQLGAGAFRSAGRLVKLSLANNHLAGVHEAAFESLESLQVLELNDNNLRSLNVAALDAL 179
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLE--STKTPMAIDPI-CSVPPRLSSVTIKQLSID 249
P L + L NPW CDC L W++ ++K P +D I CS+P V +++LS
Sbjct: 180 PA-LRTVRLDGNPWLCDCDFAHLFSWIQENTSKLPKGLDAIQCSLPMEDRRVALRELSEA 238
Query: 250 ELA-CEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF 290
+ C+ ++ + ++ I G VS+ +S+ A + F
Sbjct: 239 SFSECKFSLSLTDLFIIIFSGVAVSIAAIISSFFLATVVQCF 280
Score = 147 (56.8 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 44/165 (26%), Positives = 75/165 (45%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C TV+C ++ L +V + + + L GN ++ + + F G +
Sbjct: 31 ACPAGCACT---DPHTVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQQIPEDFFIFHG--D 85
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L + + ++ F G L LD S+N L + + F L+KL+L+ N +
Sbjct: 86 LVYLDFRNNSLRSLEEGTFSGSGKLAFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNHLA 145
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ AF+ L L LEL+ + + AA L +L ++LD N
Sbjct: 146 GVHEAAFESLESLQVLELNDNNLRSLNVAALDALPALRTVRLDGN 190
>ZFIN|ZDB-GENE-091116-44 [details] [associations]
symbol:lrrc4bb "leucine rich repeat containing 4Bb"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091116-44 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101682
PANTHER:PTHR24369:SF7 EMBL:CU672238 EMBL:CU681836 IPI:IPI00961430
Ensembl:ENSDART00000007208 Uniprot:E7F2A9
Length = 745
Score = 258 (95.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 87/300 (29%), Positives = 132/300 (44%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N ++TL F ++ +L+++ L R +S I AF GL NL L+ L+ VP+
Sbjct: 169 NPIETLPAYAFHRVP--SLRRLDLGELRKLSFISEAAFEGLLNLRFLNLGMCGLKDVPNL 226
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
T P L +L LSGN + ++ G+FQ L L L L I VIE AF L +LE L
Sbjct: 227 T-P-LVRLEELELSGNQLGVVRPGSFQGLVSLRKLWLMHSRISVIERNAFDDLKNLEELN 284
Query: 178 LDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
L +N + ++ P L + L+HNPW C+C ++ L WL+ T + C P
Sbjct: 285 LSHNSLHSLPHDLFTPLQQLERVHLNHNPWVCNCDVLWLSWWLKETVPDNSTCCARCHAP 344
Query: 236 PRLSSVTIKQLSIDELAC-EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVP 294
P I L + C P I L + EG L C+ + WL P
Sbjct: 345 PGTKGRYIGDLDQRDFTCYAPVIVEPPTDLNVTEGMAAELKCRTGT-SMTSVNWL---TP 400
Query: 295 IQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N ++ +H Y + L N + D G + C+ N AG+T++ + +
Sbjct: 401 --NGTLM---THGAYKVRISV-LHDGTLNFTNVTMQDTGPYTCMVTNSAGNTTATAVLNV 454
Score = 211 (79.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 57/180 (31%), Positives = 93/180 (51%)
Query: 1 MMYWIFLIATIIKIVS-ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGN 59
++ W L+ + S ACP C C + + V C KSL V + + NT+ L+ N
Sbjct: 40 LLLWPHLLGPRLAEASPACPALCSCSNQASR--VICTKKSLNEVPQSISSNTRYLNLQEN 97
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
+++ + ++ F+ + +L+ + LS+ +I I+ AF GL NL+ L+ N L VPS F
Sbjct: 98 SIQVIRSDTFKHLN--HLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVPSQAF 155
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKL 178
L +L L NPI+ + AF + L L+L + + I +AAF GL +L +L L
Sbjct: 156 EYLSKLRELWLRNNPIETLPAYAFHRVPSLRRLDLGELRKLSFISEAAFEGLLNLRFLNL 215
Score = 149 (57.5 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 34/81 (41%), Positives = 49/81 (60%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L+ +GN L + FQ GLV+L+K++L RISVI+ AF L NL +L+ SHN L +
Sbjct: 235 LELSGNQLGVVRPGSFQ--GLVSLRKLWLMHSRISVIERNAFDDLKNLEELNLSHNSLHS 292
Query: 114 VPSDTFPDYPSLMKLTLSGNP 134
+P D F L ++ L+ NP
Sbjct: 293 LPHDLFTPLQQLERVHLNHNP 313
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 34/83 (40%), Positives = 44/83 (53%)
Query: 104 LDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
L+ N +Q + SDTF L L LS N I+QI+ GAF L L+TLEL + ++
Sbjct: 92 LNLQENSIQVIRSDTFKHLNHLEILQLSKNQIRQIEVGAFNGLPNLITLELFDNRLPLVP 151
Query: 164 DAAFVGLDSLEWLKLDNNKITTI 186
AF L L L L NN I T+
Sbjct: 152 SQAFEYLSKLRELWLRNNPIETL 174
>MGI|MGI:2653612 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=ISO] [GO:0007156 "homophilic
cell adhesion" evidence=ISO;ISS] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=ISO;ISS] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0007413 "axonal fasciculation" evidence=ISO;ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISO] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0042552 "myelination" evidence=ISS] [GO:0050772 "positive
regulation of axonogenesis" evidence=ISO;ISS] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2653612 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0042552 GO:GO:0050772 GO:GO:0007157
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57463 eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237008
EMBL:AB167509 EMBL:AK035960 EMBL:AK173118 EMBL:AL671854
EMBL:BC010598 EMBL:BC022907 IPI:IPI00122248 IPI:IPI00608009
RefSeq:NP_001004293.1 RefSeq:NP_666249.2 UniGene:Mm.275752 PDB:2XOT
PDBsum:2XOT ProteinModelPortal:Q80ZD8 SMR:Q80ZD8 STRING:Q80ZD8
PhosphoSite:Q80ZD8 PRIDE:Q80ZD8 Ensembl:ENSMUST00000050909
Ensembl:ENSMUST00000106656 Ensembl:ENSMUST00000106659 GeneID:229715
KEGG:mmu:229715 GeneTree:ENSGT00530000063545 InParanoid:Q80ZD8
NextBio:379639 Bgee:Q80ZD8 CleanEx:MM_AMIGO1 Genevestigator:Q80ZD8
GermOnline:ENSMUSG00000050947 Uniprot:Q80ZD8
Length = 492
Score = 254 (94.5 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 100/368 (27%), Positives = 160/368 (43%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+F +A + V +CP +C+C + C + L V + + T +LD + NNL L
Sbjct: 21 LFEVARAGRSVVSCPANCLC----ASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRL 76
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
E + L NL + LS ++ I S+AF + NL LD S N L T+ F D +
Sbjct: 77 RAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQA 135
Query: 125 LMKLTLSGNPIKQIKTGAFQPLS-----YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L N I + AF+ ++ YL ++S+ +E+I+D L L L L
Sbjct: 136 LEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGN--KLPKLMLLDLS 193
Query: 180 NNKITTISGSNI--LPTGL-HGIDLHHNPWTCDCLLIGL-RRWLE---STKTPMAIDPIC 232
+NK+ + +++ LP + +G+ LH+NP CDC L L W S+ D C
Sbjct: 194 SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYC 253
Query: 233 SVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDG 292
+L ++ S+D C + S + E G +++ C K+ W
Sbjct: 254 MHSKKLHNI----FSLDFFNCS-EYKESAW--EAHLGDTLTIRCDTKQQGMTKV-W---- 301
Query: 293 VPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
V NE + + S+ S G +L ++D G + C A G T N T+
Sbjct: 302 VSPSNEQVLSQGSNGSVSVRNG------DLFFKKVQVEDGGVYTCYA---MGETF-NETL 351
Query: 353 RIVLKEEN 360
+ LK N
Sbjct: 352 SVELKVYN 359
>MGI|MGI:2444885 [details] [associations]
symbol:Lrit2 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 MGI:MGI:2444885 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HSSP:P07359 GeneTree:ENSGT00700000104028 CTD:340745
HOGENOM:HOG000082676 HOVERGEN:HBG060406 OrthoDB:EOG4X97H6
eggNOG:NOG331103 EMBL:BC057628 IPI:IPI00277844 RefSeq:NP_775594.1
UniGene:Mm.134302 ProteinModelPortal:Q6PFC5 SMR:Q6PFC5 PRIDE:Q6PFC5
Ensembl:ENSMUST00000057176 GeneID:239038 KEGG:mmu:239038
UCSC:uc007tbs.1 InParanoid:Q6PFC5 OMA:HIGPGIN NextBio:383967
Bgee:Q6PFC5 Genevestigator:Q6PFC5 Uniprot:Q6PFC5
Length = 549
Score = 255 (94.8 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 87/345 (25%), Positives = 151/345 (43%)
Query: 7 LIATIIKIVSA-CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH 65
L++ +I V C C C + ++++C++ SL + + + + + L L
Sbjct: 12 LVSWVIHAVQPFCLPECTCSEESFGRSLQCMSMSLGKIPDNFPEELKQVRIENSPLFELS 71
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F M +L+ ++L+ ++VI A L L +L N L++VP F P L
Sbjct: 72 QGFFTNMS--SLEYLWLNFNNVTVIHLGALEDLPELRELRLEGNKLRSVPWTAFRATPLL 129
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L N I + A Q L+ L+ L++S + V+ F L W +
Sbjct: 130 RVLDLKHNRIDSVPELALQFLTNLIYLDISSNRLTVVSKGVF-----LNWPAYQKRQQLG 184
Query: 186 ISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP---ICSVPPRLSSVT 242
G+ L + + LH+NPW CDC L GL ++++S P + +C P +
Sbjct: 185 C-GAEFLSNMV--LSLHNNPWLCDCRLRGLAQFVKSVGPPFILVNSYLVCQGPVSKAGQL 241
Query: 243 IKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSA 302
+ + + + +P I+ + + IQ GKNV+L C A P I W + P+ S
Sbjct: 242 LHETELG-VCMKPTISTPSVNVTIQVGKNVTLQCFAQASPSPTIAWKY---PL-----ST 292
Query: 303 SESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
V ++ I S+L+I + + D G + C+A N G +S
Sbjct: 293 WREFDVLASPIAEGIILSQLVIPAAQLVDGGNYTCMAFNSIGRSS 337
>RGD|727797 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=ISO]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISO;ISS] RGD:727797 GO:GO:0009897
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0045121 GO:GO:0007166
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 OrthoDB:EOG4FXR7G CTD:349667 KO:K16661
OMA:WFREARV EMBL:AF532860 IPI:IPI00331880 RefSeq:NP_852045.1
UniGene:Rn.162683 ProteinModelPortal:Q80WD1 PRIDE:Q80WD1
Ensembl:ENSRNOT00000038250 GeneID:311169 KEGG:rno:311169
UCSC:RGD:727797 InParanoid:Q80WD1 NextBio:663102
Genevestigator:Q80WD1 GermOnline:ENSRNOG00000021513 Uniprot:Q80WD1
Length = 420
Score = 251 (93.4 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 75/236 (31%), Positives = 113/236 (47%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLDYT--GNN--LKTLHNEKFQKMGLVNLQKIYLSRCRI 87
T+ + +L T+ G + Q L+ G+N L++L + FQ GL LQ ++L RC++
Sbjct: 86 TLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQL 143
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S + FRGL +L L N L + D F D +L L L GN ++ + F+ L
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 203
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNP 205
L L L ++ + AAF GL L L L NN + ++ G + LP L + L+ NP
Sbjct: 204 SLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPA-LEFLRLNANP 262
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL-SIDELACEPQITPS 260
W CDC L W + + + D C+ PP ++ L D AC P TP+
Sbjct: 263 WACDCRARPLWAWFQRARVSSS-DVTCATPPERQGRDLRTLRDTDFQACPPP-TPT 316
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 52/195 (26%), Positives = 83/195 (42%)
Query: 14 IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMG 73
+ +CP C C TV C + +V + P+TQ L N +++L F
Sbjct: 27 VTPSCPMLCTCY--SSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSLRPGTFGP-- 82
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYPSLMKLTLSG 132
NL ++L +S I FR L L +LD N L+++ DTF L L L
Sbjct: 83 --NLLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYR 140
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
+ + F+ L L L L + + ++D F L +L L L N++ ++ ++
Sbjct: 141 CQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLT-EHVF 199
Query: 193 PTGLHGID---LHHN 204
GL +D LH N
Sbjct: 200 -RGLGSLDRLLLHGN 213
>ZFIN|ZDB-GENE-080327-25 [details] [associations]
symbol:lrrc4ba "leucine rich repeat containing 4Ba"
species:7955 "Danio rerio" [GO:0051965 "positive regulation of
synapse assembly" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR026883 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080327-25 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0051965 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 KO:K16360
PANTHER:PTHR24369:SF7 EMBL:CR936968 IPI:IPI00774078
RefSeq:XP_684717.3 UniGene:Dr.114368 Ensembl:ENSDART00000076649
Ensembl:ENSDART00000150958 GeneID:556747 KEGG:dre:556747 CTD:556747
NextBio:20881642 Uniprot:F1QBH8
Length = 729
Score = 257 (95.5 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 85/307 (27%), Positives = 136/307 (44%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N ++TL F ++ +L+++ L + + I AF GL NL L+ L+ +P+
Sbjct: 151 NPIETLPGYAFHRVP--SLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIPNL 208
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
T P L +L LSGN ++ I+ G+FQ L L L L + VIE AF L +LE L
Sbjct: 209 T-P-LVRLEELELSGNRLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELN 266
Query: 178 LDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAIDPICSVP 235
L +N + ++ P L + L+HNPW C+C ++ L WL+ T + C P
Sbjct: 267 LSHNSLHSLPHDLFTPLQKLERVHLNHNPWVCNCDVLWLSWWLKETVPSNTTCCARCHAP 326
Query: 236 PRLSSVTIKQLSIDELAC-EPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVP 294
P L I +L C P I L + EG L C+ + W+ P
Sbjct: 327 PYLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEGMAAELKCRTGT-SMTSVNWI---TP 382
Query: 295 IQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
N ++ +H Y + L N + D G + C+ N AG+T++ + +
Sbjct: 383 --NGTLM---THGSYRVRISV-LHDGTLNFTNVTLRDTGQYTCMVTNSAGNTTATAVLNV 436
Query: 355 VLKEENV 361
+ +V
Sbjct: 437 TAADVSV 443
Score = 200 (75.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 88/336 (26%), Positives = 145/336 (43%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
S CP C C + + V C + L V + + NT+ L+ N ++ + ++ F+ L
Sbjct: 38 STCPAVCSCSNQASR--VICARQHLEEVPDNISNNTRYLNLQENTIQVIKSDTFKH--LR 93
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + LS+ +I I+ AF GL NL L+ N L VPS F L +L L NPI
Sbjct: 94 HLEILQLSKNQIRQIEVGAFNGLPNLNTLELFDNRLTLVPSQAFEYLSKLRELWLRNNPI 153
Query: 136 KQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
+ + AF + L L+L + ++ I DAAFVGL +L +L L + I N+ P
Sbjct: 154 ETLPGYAFHRVPSLRRLDLGELKKLDYISDAAFVGLINLRYLNLGMCGLKDIP--NLTPL 211
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
L ++L N + + G + LES + + SV R + +K L L+
Sbjct: 212 VRLEELELSGN--RLEIIRPGSFQGLESLRKLWLMHSQMSVIERNAFDDLKNLEELNLSH 269
Query: 254 EP-QITPSTFYLEIQEGKNVSL-----LCKVSAIPEAKITWLFDGVPIQNESMSASESHA 307
P + +Q+ + V L +C + + WL + VP + +
Sbjct: 270 NSLHSLPHDLFTPLQKLERVHLNHNPWVCNCDVLWLS--WWLKETVPSNTTCCARCHAPP 327
Query: 308 VYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQA 343
+ E+ +S Y I + T + V E A
Sbjct: 328 YLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTEGMA 363
>RGD|1306550 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] InterPro:IPR001611 PROSITE:PS51450 RGD:1306550
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099859 EMBL:CH473951 CTD:84189 OMA:YFELKAN
OrthoDB:EOG4X0MRT IPI:IPI00205859 RefSeq:NP_001099527.1
UniGene:Rn.99063 Ensembl:ENSRNOT00000038433 GeneID:290467
KEGG:rno:290467 UCSC:RGD:1306550 NextBio:631101 Uniprot:D3ZP44
Length = 840
Score = 257 (95.5 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 85/277 (30%), Positives = 127/277 (45%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVE-GMDPNTQV-LDYTGNNLKTLHNEKFQKMGL 74
+C T C C+ K G + C K + T+ + + P+ L N L TLH F GL
Sbjct: 30 SCDTLCTCEEKDGIMIINCEEKGINTLSQISVPPSRPFHLSLLNNGLTTLHTNDFS--GL 87
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N I+L I+ I++ AF GL L L +HN L+ + DTF +L L N
Sbjct: 88 TNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
I I+ AF L+ L L L+ IE + F + L L L N++ T+ L
Sbjct: 148 ITVIEQSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI--DPICSVPPRLSSVTIKQLSIDE 250
G + + L N W C+C L+ L+ WLE+ P +I D IC PP + +L +
Sbjct: 207 IGRILDLQLEDNKWACNCELLQLKNWLENMP-PQSIIGDVICYSPPLFKGSILSRLKKES 265
Query: 251 LACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT 287
+ C P TP + E E SLL S+ +++++
Sbjct: 266 I-C-P--TPPVY--EEHEDPAGSLLAITSSTSDSRLS 296
Score = 254 (94.5 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 80/261 (30%), Positives = 118/261 (45%)
Query: 15 VSACPTSCICK-WKGGKQTVECVNKSLITVVEGMDP--NTQVLDYTGNNLKTLHNEKFQK 71
V CP C CK + C +++ +V + P N + L GN + TL K
Sbjct: 325 VPYCPVPCNCKVLSPSGLLIHCQERNIESVSDLQPPPHNPRKLILAGNIIHTLM--KADL 382
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
M L+ ++L RI V++ +F LT L L + N L + F SL L L
Sbjct: 383 MDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLYKGMFLGLSSLEYLYLE 442
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
N +K+I G F P+ L L L+ + V+ F+G+ L + L N+ T + SNI
Sbjct: 443 YNAVKEILPGTFNPMPKLKVLYLNNNLLHVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNI 501
Query: 192 LPTG--LHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSI 248
L L IDL NPW C C L+GL++W+ K + D +C+ P L +K L+
Sbjct: 502 LDDLDLLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTVTDDILCASPGHLDKKELKALN- 560
Query: 249 DELAC-----EPQITPSTFYL 264
EL C P + T Y+
Sbjct: 561 SELLCPGLVNNPSMPTQTSYI 581
>UNIPROTKB|Q92626 [details] [associations]
symbol:PXDN "Peroxidasin homolog" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005152
"interleukin-1 receptor antagonist activity" evidence=NAS]
[GO:0006955 "immune response" evidence=NAS] [GO:0004601 "peroxidase
activity" evidence=IDA] [GO:0005201 "extracellular matrix
structural constituent" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0030198 "extracellular matrix
organization" evidence=IDA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=IDA] [GO:0020037 "heme binding"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] [GO:0005615 "extracellular space" evidence=IDA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0001960
"negative regulation of cytokine-mediated signaling pathway"
evidence=NAS] InterPro:IPR001611 InterPro:IPR001007
InterPro:IPR002007 InterPro:IPR007110 InterPro:IPR010255
InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457
PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292
PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214 GO:GO:0005783
GO:GO:0005615 EMBL:CH471053 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0006955 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Orphanet:289499 GO:GO:0005201 Gene3D:1.10.640.10 GO:GO:0005152
CleanEx:HS_PRG2 HSSP:P05164 eggNOG:NOG262194 HOGENOM:HOG000016084
HOVERGEN:HBG108312 EMBL:AF200348 EMBL:EF090903 EMBL:D86983
EMBL:BC098579 IPI:IPI00016112 IPI:IPI00791587 RefSeq:NP_036425.1
UniGene:Hs.332197 ProteinModelPortal:Q92626 SMR:Q92626
IntAct:Q92626 STRING:Q92626 PeroxiBase:3355 PhosphoSite:Q92626
DMDM:172045828 PaxDb:Q92626 PRIDE:Q92626 DNASU:7837
Ensembl:ENST00000252804 GeneID:7837 KEGG:hsa:7837 UCSC:uc002qxa.3
UCSC:uc002qxb.1 CTD:7837 GeneCards:GC02M001635 HGNC:HGNC:14966
HPA:HPA012375 MIM:605158 neXtProt:NX_Q92626 PharmGKB:PA128394535
InParanoid:Q92626 OMA:EPVITWN OrthoDB:EOG4J1179 ChiTaRS:PXDN
GenomeRNAi:7837 NextBio:30238 ArrayExpress:Q92626 Bgee:Q92626
CleanEx:HS_PXDN Genevestigator:Q92626 Uniprot:Q92626
Length = 1479
Score = 260 (96.6 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 85/276 (30%), Positives = 131/276 (47%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I AFR L NL L ++N ++ +PS F D +L L L N I+ I AF+
Sbjct: 73 RIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKG 132
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGS-NILPTGLHGIDLHH 203
L+ L L L IE ++ +F L LE L L NN+IT + G+ N L + + + L
Sbjct: 133 LASLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLES-MKRLRLDS 191
Query: 204 NPWTCDCLLIGL----RRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE-PQIT 258
N CDC ++ L + + ES A IC P R+ ++ ++ +EL CE P+IT
Sbjct: 192 NTLHCDCEILWLADLLKTYAESGNAQAAA--ICEYPRRIQGRSVATITPEELNCERPRIT 249
Query: 259 PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIK 318
++ G V C+ P+ +I WL + N +S + ++GT
Sbjct: 250 SEPQDADVTSGNTVYFTCRAEGNPKPEIIWLRN-----NNELSMKTDSRLNLLDDGT--- 301
Query: 319 KSELLIYNSNIDDNGTFVCVAENQAGSTSSN-YTIR 353
L+I N+ D G + C+A+N AG + T+R
Sbjct: 302 ---LMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLR 334
Score = 175 (66.7 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 54/180 (30%), Positives = 85/180 (47%)
Query: 4 WIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
W L K + CP+ C+C + TV C++ L+ V + P T +LD N ++
Sbjct: 22 WGTLAVVAQKPGAGCPSRCLCF----RTTVRCMHL-LLEAVPAVAPQTSILDLRFNRIRE 76
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
+ F++ L NL + L+ +I I S AF L NL L N +Q++ F
Sbjct: 77 IQPGAFRR--LRNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKGLA 134
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
SL +L L N I+ + +FQ L L L L I + F L+S++ L+LD+N +
Sbjct: 135 SLEQLYLHFNQIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNTL 194
Score = 137 (53.3 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 51/143 (35%), Positives = 74/143 (51%)
Query: 84 RCRISVIDS-KAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGA 142
RC ++++ A T+++DL F N ++ + F +L L L+ N IK+I +GA
Sbjct: 48 RCMHLLLEAVPAVAPQTSILDLRF--NRIREIQPGAFRRLRNLNTLLLNNNQIKRIPSGA 105
Query: 143 FQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGID 200
F+ L L L L K I+ I+ AF GL SLE L L N+I T+ + LP L +
Sbjct: 106 FEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPDSFQHLPK-LERLF 164
Query: 201 LHHNPWTCDCLLIGLRRWLESTK 223
LH+N T L+ G LES K
Sbjct: 165 LHNNRITH--LVPGTFNHLESMK 185
Score = 132 (51.5 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N +K + + F+ L NL+ +YL + I ID +AF+GL +L L N
Sbjct: 89 NTLLLN--NNQIKRIPSGAFED--LENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFN 144
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSK----CGIEVI 162
++T+ D+F P L +L L N I + G F L + L L C E++
Sbjct: 145 QIETLDPDSFQHLPKLERLFLHNNRITHLVPGTFNHLESMKRLRLDSNTLHCDCEIL 201
Score = 94 (38.1 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 33/114 (28%), Positives = 49/114 (42%)
Query: 245 QLSIDELACEPQITPSTFYLE----IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESM 300
Q + L +P++TP + ++ G NV L C PE ITW DGV +
Sbjct: 511 QKVVAHLTVQPRVTPVFASIPSDTTVEVGANVQLPCSSQGEPEPAITWNKDGVQV----- 565
Query: 301 SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ES + + EG L I + D G + CVA N GS S + + +
Sbjct: 566 --TESGKFHISPEGF------LTINDVGPADAGRYECVARNTIGSASVSMVLSV 611
Score = 53 (23.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 29/111 (26%), Positives = 47/111 (42%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
E+ G++V+L C + P +I+W D P+ + V T G L
Sbjct: 352 EVLVGESVTLECSATGHPPPRISWTRGDRTPLPVDPR-------VNITPSGG------LY 398
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLI 374
I N D+G + C A N S + T I+++ + TV P + V+I
Sbjct: 399 IQNVVQGDSGEYACSATNNIDSVHA--TAFIIVQA--LPQFTVTPQDRVVI 445
Score = 49 (22.3 bits), Expect = 7.0e-09, Sum P(2) = 7.0e-09
Identities = 29/139 (20%), Positives = 53/139 (38%)
Query: 218 WLESTKTPMAIDPICSVPPR--LSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLL 275
W +TP+ +DP ++ P L + Q E AC T + + V L
Sbjct: 375 WTRGDRTPLPVDPRVNITPSGGLYIQNVVQGDSGEYACSA--TNNIDSVHATAFIIVQAL 432
Query: 276 CKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSEL-LIYNSN------ 328
+ + P+ ++ V Q E+ + + T+ G+++ L+ +S
Sbjct: 433 PQFTVTPQDRVVIEGQTVDFQCEA-KGNPPPVIAWTKGGSQLSVDRRHLVLSSGTLRISG 491
Query: 329 --IDDNGTFVCVAENQAGS 345
+ D G + C A N GS
Sbjct: 492 VALHDQGQYECQAVNIIGS 510
>FB|FBgn0264089 [details] [associations]
symbol:sli "slit" species:7227 "Drosophila melanogaster"
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0008347 "glial
cell migration" evidence=IMP] [GO:0050919 "negative chemotaxis"
evidence=IMP] [GO:0007509 "mesoderm migration involved in
gastrulation" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=TAS] [GO:0008078 "mesodermal cell
migration" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP;IPI] [GO:0035385 "Roundabout signaling pathway"
evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0010632 "regulation of epithelial cell migration" evidence=IMP]
[GO:2000274 "regulation of epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0005509 "calcium ion binding"
evidence=IEA] [GO:0007427 "epithelial cell migration, open tracheal
system" evidence=IMP] [GO:0016199 "axon midline choice point
recognition" evidence=IMP] [GO:0001764 "neuron migration"
evidence=IMP] [GO:0007432 "salivary gland boundary specification"
evidence=IMP] [GO:0035050 "embryonic heart tube development"
evidence=IMP] [GO:0022409 "positive regulation of cell-cell
adhesion" evidence=IMP] [GO:0071666 "Slit-Robo signaling complex"
evidence=IDA] [GO:0048495 "Roundabout binding" evidence=IPI]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0003151 "outflow
tract morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0008406 "gonad development" evidence=IMP] [GO:0007502
"digestive tract mesoderm development" evidence=IMP] [GO:0046331
"lateral inhibition" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 EMBL:AE013599
GO:GO:0005886 GO:GO:0001764 GO:GO:0008406 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0016199 GO:GO:0008201 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899
Reactome:REACT_113552 GO:GO:0048813 PROSITE:PS01186 GO:GO:0046331
InterPro:IPR001791 Pfam:PF00054 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0007427 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0003151 GO:GO:0008078 GO:GO:0008347
GO:GO:0007432 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0022409 InterPro:IPR026906 Pfam:PF13306
GO:GO:2000274 GO:GO:0035050 Pfam:PF01463 GO:GO:0007502
GeneTree:ENSGT00700000104083 GO:GO:0035385 KO:K06839 GO:GO:0050929
EMBL:X53959 EMBL:AF126540 EMBL:M23543 PIR:A36665 PIR:B36665
RefSeq:NP_001097333.1 RefSeq:NP_001097334.1 RefSeq:NP_476727.1
RefSeq:NP_476728.1 RefSeq:NP_476729.1 UniGene:Dm.4729 PDB:1W8A
PDBsum:1W8A ProteinModelPortal:P24014 SMR:P24014 STRING:P24014
PaxDb:P24014 EnsemblMetazoa:FBtr0330731 EnsemblMetazoa:FBtr0330733
GeneID:36746 KEGG:dme:Dmel_CG8355 CTD:36746 FlyBase:FBgn0003425
InParanoid:P24014 OMA:RHKMFKG OrthoDB:EOG46DJHK PhylomeDB:P24014
EvolutionaryTrace:P24014 GenomeRNAi:36746 NextBio:800151
Bgee:P24014 GermOnline:CG8355 GO:GO:0071666 Uniprot:P24014
Length = 1504
Score = 260 (96.6 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 71/237 (29%), Positives = 116/237 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C G V+C ++ L +V + + + L+ GNNL ++ FQ+ L L
Sbjct: 73 CPRVCSCT---GLN-VDCSHRGLTSVPRKISADVERLELQGNNLTVIYETDFQR--LTKL 126
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ + L+ +I I+ +F+ L +L L ++N L+ +P + SL++L +S N I
Sbjct: 127 RMLQLTDNQIHTIERNSFQDLVSLERLRLNNNRLKAIPENFVTSSASLLRLDISNNVITT 186
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-L 196
+ F+ L +L+L I +++ AF GL LE L L+NN +T++ + G L
Sbjct: 187 VGRRVFKGAQSLRSLQLDNNQITCLDEHAFKGLVELEILTLNNNNLTSLPHNIFGGLGRL 246
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L R+L S T +A C P +L + L E C
Sbjct: 247 RALRLSDNPFACDCHLSWLSRFLRSA-TRLAPYTRCQSPSQLKGQNVADLHDQEFKC 302
Score = 168 (64.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 48/156 (30%), Positives = 75/156 (48%)
Query: 103 DLDFSHNVLQTVPSD-TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEV 161
+L + N L + SD F P L+KL L N + I+ AF+ S++ L+L + I+
Sbjct: 574 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 633
Query: 162 IEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLE 220
I + F+GL L+ L L +N+I+ + GS L ++L NP+ C+C L WL
Sbjct: 634 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLR 693
Query: 221 STKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQ 256
K+ C P ++ V IK L E C +
Sbjct: 694 K-KSLNGGAARCGAPSKVRDVQIKDLPHSEFKCSSE 728
Score = 163 (62.4 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 51/169 (30%), Positives = 74/169 (43%)
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPL 146
I+ + K+F L +D S+N + + D L L L GN IK + +G F+ L
Sbjct: 358 ITELPPKSFSSFRRLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGL 417
Query: 147 SYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL-DNNKITTISGSNILPTGLHGIDLHHNP 205
L L L+ I I AF L SL L L DNN + +G+ + + L NP
Sbjct: 418 GSLQLLLLNANEISCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKNP 477
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDELAC 253
+ CDC L L +L K P+ C P R+ I+ L ++ C
Sbjct: 478 FICDCNLRWLADYLH--KNPIETSGARCESPKRMHRRRIESLREEKFKC 524
Score = 151 (58.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 46/163 (28%), Positives = 74/163 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP SC C G V C L + G+ T L N ++ +H E+ + L +L
Sbjct: 739 CPPSCTCT---GT-VVRCSRNQLKEIPRGIPAETSELYLESNEIEQIHYERIRH--LRSL 792
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ LS +I+++ + F LT L L S+N LQ + +L L+L GN I
Sbjct: 793 TRLDLSNNQITILSNYTFANLTKLSTLIISYNKLQCLQRHALSGLNNLRVLSLHGNRISM 852
Query: 138 IKTGAFQPLSYLVTLELSK------CGIEVIEDAAFVGLDSLE 174
+ G+F+ L L + L CG++ D ++ LD +E
Sbjct: 853 LPEGSFEDLKSLTHIALGSNPLYCDCGLKWFSD--WIKLDYVE 893
Score = 144 (55.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 58/208 (27%), Positives = 86/208 (41%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
++CP C C G V+C KSL +V + +T L N + L + F
Sbjct: 317 NSCPHPCRCA--DG--IVDCREKSLTSVPVTLPDDTTELRLEQNFITELPPKSFSSFR-- 370
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
L++I LS IS I A GL L L N ++ +PS F SL L L+ N I
Sbjct: 371 RLRRIDLSNNNISRIAHDALSGLKQLTTLVLYGNKIKDLPSGVFKGLGSLQLLLLNANEI 430
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
I+ AF+ L L L L I+ + + F + S++ + L N L
Sbjct: 431 SCIRKDAFRDLHSLSLLSLYDNNIQSLANGTFDAMKSIKTVHLAKNPFICDCNLRWLADY 490
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTK 223
LH + + C+ RR +ES +
Sbjct: 491 LHKNPIETSGARCESPKRMHRRRIESLR 518
Score = 126 (49.4 bits), Expect = 0.00069, P = 0.00069
Identities = 38/141 (26%), Positives = 67/141 (47%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMG-L 74
S CP C C+ G TV+C + L + + +T L N L + ++ G L
Sbjct: 541 SDCPAMCHCE--G--TTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGL--FGRL 594
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L K+ L R +++ I+ AF G +++ +L N ++ + + F L L L N
Sbjct: 595 PHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQ 654
Query: 135 IKQIKTGAFQPLSYLVTLELS 155
I + G+F+ L+ L +L L+
Sbjct: 655 ISCVMPGSFEHLNSLTSLNLA 675
>UNIPROTKB|Q86UN3 [details] [associations]
symbol:RTN4RL2 "Reticulon-4 receptor-like 2" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
GO:GO:0009986 GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
GO:GO:0045121 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GO:GO:0031103 EMBL:AP002893 HOGENOM:HOG000116109 HOVERGEN:HBG063707
OrthoDB:EOG4FXR7G EMBL:AF532858 EMBL:AY250221 EMBL:BC113673
EMBL:BC117276 EMBL:BK001302 IPI:IPI00328746 RefSeq:NP_848665.1
UniGene:Hs.502618 ProteinModelPortal:Q86UN3 SMR:Q86UN3
IntAct:Q86UN3 STRING:Q86UN3 PhosphoSite:Q86UN3 DMDM:74759401
PaxDb:Q86UN3 PRIDE:Q86UN3 Ensembl:ENST00000335099 GeneID:349667
KEGG:hsa:349667 UCSC:uc010rjt.2 CTD:349667 GeneCards:GC11P057228
HGNC:HGNC:23053 HPA:CAB024870 MIM:610462 neXtProt:NX_Q86UN3
PharmGKB:PA134964131 InParanoid:Q86UN3 KO:K16661 OMA:WFREARV
PhylomeDB:Q86UN3 GenomeRNAi:349667 NextBio:99528
ArrayExpress:Q86UN3 Bgee:Q86UN3 CleanEx:HS_RTN4RL2
Genevestigator:Q86UN3 GermOnline:ENSG00000186907 Uniprot:Q86UN3
Length = 420
Score = 249 (92.7 bits), Expect = 2.7e-18, P = 2.7e-18
Identities = 73/231 (31%), Positives = 111/231 (48%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLDYT--GNN--LKTLHNEKFQKMGLVNLQKIYLSRCRI 87
T+ + +L T+ G + Q L+ G+N L++L + FQ GL LQ ++L RC++
Sbjct: 86 TLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQL 143
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S + FRGL +L L N L + D F D +L L L GN ++ + F+ L
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 203
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNP 205
L L L ++ + AAF GL L L L NN + ++ G + LP+ L + L+ NP
Sbjct: 204 SLDRLLLHGNRLQGVHRAAFRGLSRLTILYLFNNSLASLPGEALADLPS-LEFLRLNANP 262
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL-SIDELACEP 255
W CDC L W + + + D C+ PP ++ L D AC P
Sbjct: 263 WACDCRARPLWAWFQRARVSSS-DVTCATPPERQGRDLRALREADFQACPP 312
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 53/192 (27%), Positives = 82/192 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP C C TV C + +V + P+TQ L N ++TL F N
Sbjct: 30 SCPMLCTCY--SSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRTLRPGTFGS----N 83
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYPSLMKLTLSGNPI 135
L ++L +S I FR L L +LD N L+++ DTF L L L +
Sbjct: 84 LLTLWLFSNNLSTIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLERLQSLHLYRCQL 143
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ F+ L L L L + + ++D F L +L L L N++ ++ ++ G
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLT-EHVF-RG 201
Query: 196 LHGID---LHHN 204
L +D LH N
Sbjct: 202 LGSLDRLLLHGN 213
>ZFIN|ZDB-GENE-090312-22 [details] [associations]
symbol:mxra5 "matrix-remodelling associated 5"
species:7955 "Danio rerio" [GO:0048010 "vascular endothelial growth
factor receptor signaling pathway" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005021 "vascular
endothelial growth factor-activated receptor activity"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 ZFIN:ZDB-GENE-090312-22 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104014 EMBL:BX322647 IPI:IPI00898560
Ensembl:ENSDART00000113486 Uniprot:F1QPU8
Length = 2480
Score = 208 (78.3 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 66/232 (28%), Positives = 108/232 (46%)
Query: 4 WIFLIATIIKI-VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
WI L+ + + V CP C C V C +SL+TV G+ + ++ G N
Sbjct: 12 WIMLMLIAVPVAVQCCPRPCACHQP---VEVHCTFRSLLTVPAGVPKQVERMNL-GFN-- 65
Query: 63 TLHNEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
T+H + GL ++ + + + I FR L +L L S+N L+ + T
Sbjct: 66 TIHKITYSSFAGLRKMELLLMHGNNVHQIPDGTFRDLISLQMLKLSYNKLKLLSRQTLMG 125
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF-----VG---LDSL 173
SL +L L N ++ I AFQ L+ L L L ++ + A F +G + +L
Sbjct: 126 LWSLTRLHLDHNRLEFIHPDAFQGLTNLRLLHLEGNQLQQLHPATFSTFSVLGHFPVSTL 185
Query: 174 EWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTK 223
+ L L +N +TT+S + +P L + LH NPWTCDC + W ++++
Sbjct: 186 KHLYLSDNILTTLSQKMLASMPY-LESLSLHGNPWTCDCRMRWFNEWNKNSQ 236
Score = 110 (43.8 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 27/92 (29%), Positives = 41/92 (44%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
++ G N+ + C S +P KI W L DG I S+ SE + T LL
Sbjct: 1906 KVMYGDNLKVDCVASGLPNPKIQWALPDGTMIN--SVIKSERNVGSRTRRYVVFDNGTLL 1963
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ + + G + C AENQ G N +++V
Sbjct: 1964 LNEVGMHEEGNYTCYAENQVGKDEMNVHVKVV 1995
Score = 104 (41.7 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 30/114 (26%), Positives = 57/114 (50%)
Query: 243 IKQLSIDELACEPQI-TPS--TFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNE 298
I QL + ++ +P++ +P TF L + G+ ++L C P ++TW+ +G P+Q
Sbjct: 2183 IVQLHVTDILDKPKLKSPKMETFLLTV--GRTINLNCSFEISPTLQLTWILQNGSPLQ-- 2238
Query: 299 SMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
S ++ + +GT L+I N + ++GT+ C+ N AG T+
Sbjct: 2239 --SGAQFNKFLHRADGT------LVISNPALSESGTYRCLGRNAAGMVERTVTL 2284
Score = 91 (37.1 bits), Expect = 3.0e-16, Sum P(2) = 3.0e-16
Identities = 25/76 (32%), Positives = 37/76 (48%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ SL C + P+A I W+ I N+ ++ S + G+ L+I NS
Sbjct: 584 GEPFSLPCAATGSPDADIHWILPNGSIVNKWLNISR---ISVASNGS------LVIQNSQ 634
Query: 329 IDDNGTFVCVAENQAG 344
+ DNG + CVA NQ G
Sbjct: 635 LSDNGYYKCVAGNQHG 650
Score = 88 (36.0 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 33/149 (22%), Positives = 66/149 (44%)
Query: 231 ICSVPPRLSS--VTIKQLSIDE--LACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKI 286
+CSV + + + + + E +P+ +T YL G+ + C+ P+ +I
Sbjct: 1572 LCSVQNQFGEDRIVVNLIVLAEHPRVLQPRYREATAYL----GQTIEFECQSKGHPQPRI 1627
Query: 287 TWLFDGVPIQNESMSA--SESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAG 344
TW+ + + S+ + H + GT KS N D G + C+A N AG
Sbjct: 1628 TWVLPNKEVVHSSVPTHGTPEHMISVLPNGTLHMKS------INQMDRGIYKCIASNAAG 1681
Query: 345 STSSNYTIRI-----VLKEENVEVVTVFP 368
+ + + + + ++++ ++E VT FP
Sbjct: 1682 ADAISVRLTVATLAPIIQQLSLENVT-FP 1709
Score = 76 (31.8 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 23/93 (24%), Positives = 41/93 (44%)
Query: 264 LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
+ + G++VSL C P + W F P S+S+ + +++ GT L+
Sbjct: 2009 IRVLYGESVSLQCSAKGEPTPLVLW-FS--PTNRAITSSSDKYFIHNN--GT------LI 2057
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVL 356
I D G ++C+A N AG + I++
Sbjct: 2058 IKKVQRFDGGNYICLARNSAGQDRKVTRVEILV 2090
Score = 74 (31.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 24/102 (23%), Positives = 45/102 (44%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL- 323
++ G + L C S PE +I W + S ++H YS + ++ + L
Sbjct: 1809 DVVYGGRLHLDCITSGNPEPRIIW-------RTPSKKLVDAH--YSYDSRIKVSANGTLS 1859
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVT 365
I + ++G ++CVA N+ G + + I+ K +E T
Sbjct: 1860 IISVTEKEDGEYLCVARNKIGDDFVPFKVSIMAKPAKIEQKT 1901
Score = 68 (29.0 bits), Expect = 7.4e-14, Sum P(2) = 7.4e-14
Identities = 24/92 (26%), Positives = 42/92 (45%)
Query: 264 LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
+ I G++++L C +S +TW I N A +AV GT L
Sbjct: 2300 VSIINGQSLNLHC-MSNTDSVHLTWTLPSGMILNRPQRAGR-YAVLPN--GT------LS 2349
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
I +++ D G++ C A N+ GS+ + + I+
Sbjct: 2350 IQQASVHDRGSYTCRASNEYGSSLLSVPVIII 2381
Score = 67 (28.6 bits), Expect = 9.4e-14, Sum P(2) = 9.4e-14
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 251 LACEPQIT----PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESH 306
+A P+IT P+T+ + G V L C IP+A++ W P + + + +
Sbjct: 2381 IAYPPRITSGPAPATY---AKRGVAVQLNCLAIGIPKAEVAW---ETPDRTRLIVSPQPR 2434
Query: 307 AV---YSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAG-STSSNY 350
+ Y +G+ L+I N D G + C A N G T Y
Sbjct: 2435 LIGNKYLHPQGS------LIIQNPTTKDAGLYRCTARNVVGVDTKGTY 2476
Score = 57 (25.1 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 17/71 (23%), Positives = 30/71 (42%)
Query: 276 CKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTF 335
C + P ++ W+ +P +N + A Y T + L I + + D+G
Sbjct: 2119 CDATGTPAPRVMWV---LP-ENVVLPAP-----YYGSRMTVYRNGTLDIRSVRMTDSGQL 2169
Query: 336 VCVAENQAGST 346
C+A N+ G T
Sbjct: 2170 ACIARNEGGET 2180
Score = 56 (24.8 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 23/113 (20%), Positives = 42/113 (37%)
Query: 268 EGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYN 326
EG V C P I W+ DG+ + + V+ GT L +++
Sbjct: 1710 EGSTVYFNCSARGAPPPSINWITPDGMQLHPSQFINGRNLFVFPN--GT------LHLHS 1761
Query: 327 SNIDDNGTFVCVAENQAGSTSSNY--TIRIVLKEENVEVVTVFPLEYVLIVSG 377
++ D G + C N G+ T+R +K ++ P + ++ G
Sbjct: 1762 LSLTDAGRYECSVTNVIGNARRAIILTVRKSMKYSRAKITFSSPQKTDVVYGG 1814
Score = 47 (21.6 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/50 (24%), Positives = 24/50 (48%)
Query: 316 EIKKSELLIYNSNID-DNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVV 364
E+ + LI + I D G ++C +NQ G + +++ E+ V+
Sbjct: 1551 EVSSNGTLIIHKVIPLDQGQYLCSVQNQFGE--DRIVVNLIVLAEHPRVL 1598
Score = 39 (18.8 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 209 DCLLIGLRRWLESTKTPMAIDPICSVPPRL 238
+CL IG+ + + +TP I S PRL
Sbjct: 2406 NCLAIGIPKAEVAWETPDRTRLIVSPQPRL 2435
>MGI|MGI:2669796 [details] [associations]
symbol:Rtn4rl2 "reticulon 4 receptor-like 2" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0031103
"axon regeneration" evidence=TAS] [GO:0031225 "anchored to
membrane" evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO]
[GO:0046658 "anchored to plasma membrane" evidence=ISO]
MGI:MGI:2669796 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:349667 KO:K16661 EMBL:AY250220 EMBL:BC132523
EMBL:BC138154 EMBL:AK142743 EMBL:BK001303 IPI:IPI00356283
RefSeq:NP_954693.1 UniGene:Mm.389289 UniGene:Mm.86447
ProteinModelPortal:Q7M6Z0 SMR:Q7M6Z0 PhosphoSite:Q7M6Z0
PRIDE:Q7M6Z0 Ensembl:ENSMUST00000054514 GeneID:269295
KEGG:mmu:269295 InParanoid:A2RTJ0 NextBio:392775 Bgee:Q7M6Z0
CleanEx:MM_RTN4RL2 Genevestigator:Q7M6Z0
GermOnline:ENSMUSG00000050896 Uniprot:Q7M6Z0
Length = 420
Score = 248 (92.4 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 75/236 (31%), Positives = 113/236 (47%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLDYT--GNN--LKTLHNEKFQKMGLVNLQKIYLSRCRI 87
T+ + +L T+ G + Q L+ G+N L++L + FQ GL LQ ++L RC++
Sbjct: 86 TLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQL 143
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S + FRGL +L L N L + D F D +L L L GN ++ + F+ L
Sbjct: 144 SSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 203
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNP 205
L L L ++ + AAF GL L L L NN + ++ G + LP L + L+ NP
Sbjct: 204 SLDRLLLHGNRLQGVHRAAFHGLSRLTILYLFNNSLASLPGEALADLPA-LEFLRLNANP 262
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL-SIDELACEPQITPS 260
W CDC L W + + + D C+ PP ++ L D AC P TP+
Sbjct: 263 WACDCRARPLWAWFQRARVSSS-DVTCATPPERQGRDLRALRDSDFQACPPP-TPT 316
Score = 135 (52.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 55/204 (26%), Positives = 89/204 (43%)
Query: 7 LIATIIKIVSACPTSC--ICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
L+ T++ + S P SC +C TV C + +V + P+TQ L N +++L
Sbjct: 17 LLLTLLALPSVTP-SCPMLCTCYSSPPTVSCQANNFSSVPLSLPPSTQRLFLQNNLIRSL 75
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYP 123
F NL ++L +S I FR L L +LD N L+++ DTF
Sbjct: 76 RPGTFGP----NLLTLWLFSNNLSTIHPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLE 131
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + + F+ L L L L + + ++D F L +L L L N++
Sbjct: 132 RLQSLHLYRCQLSSLPGNIFRGLVSLQYLYLQENSLLHLQDDLFADLANLSHLFLHGNRL 191
Query: 184 TTISGSNILPTGLHGID---LHHN 204
++ ++ GL +D LH N
Sbjct: 192 RLLT-EHVF-RGLGSLDRLLLHGN 213
>MGI|MGI:1315205 [details] [associations]
symbol:Slit2 "slit homolog 2 (Drosophila)" species:10090
"Mus musculus" [GO:0001656 "metanephros development" evidence=IMP]
[GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001933
"negative regulation of protein phosphorylation" evidence=ISO]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=ISO] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=ISO] [GO:0005095 "GTPase inhibitor activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=TAS]
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006935
"chemotaxis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IMP;IDA]
[GO:0007411 "axon guidance" evidence=ISO;IGI;IMP;IDA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0008201 "heparin
binding" evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=IGI] [GO:0009986 "cell surface"
evidence=ISO] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0010629 "negative
regulation of gene expression" evidence=IGI] [GO:0014912 "negative
regulation of smooth muscle cell migration" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IGI;IMP] [GO:0021772
"olfactory bulb development" evidence=IGI] [GO:0021836
"chemorepulsion involved in postnatal olfactory bulb interneuron
migration" evidence=ISO] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=ISO] [GO:0022029
"telencephalon cell migration" evidence=IGI] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030336 "negative regulation of cell
migration" evidence=ISO] [GO:0030837 "negative regulation of actin
filament polymerization" evidence=ISO] [GO:0031290 "retinal
ganglion cell axon guidance" evidence=ISO;IGI;IMP] [GO:0033563
"dorsal/ventral axon guidance" evidence=IGI;IMP] [GO:0035385
"Roundabout signaling pathway" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043086
"negative regulation of catalytic activity" evidence=ISO]
[GO:0043116 "negative regulation of vascular permeability"
evidence=ISO] [GO:0043237 "laminin-1 binding" evidence=ISO]
[GO:0043394 "proteoglycan binding" evidence=ISO] [GO:0043395
"heparan sulfate proteoglycan binding" evidence=ISO] [GO:0045499
"chemorepellent activity" evidence=IMP] [GO:0048495 "Roundabout
binding" evidence=ISO] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=ISO] [GO:0048812 "neuron projection
morphogenesis" evidence=IGI;IMP] [GO:0048846 "axon extension
involved in axon guidance" evidence=ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=ISO] [GO:0050919
"negative chemotaxis" evidence=ISO;IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=ISO] [GO:0051058 "negative regulation
of small GTPase mediated signal transduction" evidence=ISO]
[GO:0060603 "mammary gland duct morphogenesis" evidence=IGI;IMP]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IMP]
[GO:0070100 "negative regulation of chemokine-mediated signaling
pathway" evidence=ISO] [GO:0071504 "cellular response to heparin"
evidence=ISO] [GO:0071672 "negative regulation of smooth muscle
cell chemotaxis" evidence=ISO] [GO:0071676 "negative regulation of
mononuclear cell migration" evidence=ISO] [GO:0090024 "negative
regulation of neutrophil chemotaxis" evidence=ISO] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISO]
[GO:0090260 "negative regulation of retinal ganglion cell axon
guidance" evidence=ISO] [GO:0090288 "negative regulation of
cellular response to growth factor stimulus" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000742
InterPro:IPR001881 InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187
PROSITE:PS50026 PROSITE:PS51450 SMART:SM00179 SMART:SM00181
InterPro:IPR000152 MGI:MGI:1315205 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 GO:GO:0009986 GO:GO:0030308 GO:GO:0001701
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GO:GO:0001656 GO:GO:0010596 GO:GO:0001657 GO:GO:0001933
GO:GO:0048754 GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207
PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041 GO:GO:0048846
GO:GO:0021772 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0022029 GO:GO:0033563 GO:GO:0045499 GO:GO:0002042
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0090260 GO:GO:0021836
GO:GO:0061364 HOVERGEN:HBG057959 CTD:9353 KO:K06839 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 EMBL:AF144628
EMBL:AC101004 EMBL:AC113542 EMBL:AC157351 EMBL:AF074960
EMBL:BC059267 IPI:IPI00128415 PIR:T42626 RefSeq:NP_848919.3
UniGene:Mm.289739 ProteinModelPortal:Q9R1B9 SMR:Q9R1B9
STRING:Q9R1B9 PhosphoSite:Q9R1B9 PRIDE:Q9R1B9
Ensembl:ENSMUST00000170109 GeneID:20563 KEGG:mmu:20563
UCSC:uc008xjo.2 InParanoid:Q9R1B9 OrthoDB:EOG4D7Z4T ChiTaRS:SLIT2
NextBio:298857 Bgee:Q9R1B9 CleanEx:MM_SLIT2 Genevestigator:Q9R1B9
Uniprot:Q9R1B9
Length = 1521
Score = 270 (100.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 85/251 (33%), Positives = 117/251 (46%)
Query: 7 LIATIIKIVS--ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
L+ +I+ V+ ACP C C G TV+C +L +V + NT+ LD GNN+ +
Sbjct: 15 LVLSILNKVAPQACPAQCSCS---GS-TVDCHGLALRSVPRNIPRNTERLDLNGNNITRI 70
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
K GL +L+ + L RIS I+ AF+ L L L + N LQ P F
Sbjct: 71 --TKIDFAGLRHLRVLQLMENRISTIERGAFQDLKELERLRLNRNNLQLFPELLFLGTAK 128
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L +L LS N I+ I AF+ + L+L I IED AF L LE L L+NN IT
Sbjct: 129 LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNIT 188
Query: 185 TISGS--NILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVT 242
+S + N +P L LH N CDC L L WL + + + C P L
Sbjct: 189 RLSVASFNHMPK-LRTFRLHSNNLYCDCHLAWLSDWLRQ-RPRVGLYTQCMGPSHLRGHN 246
Query: 243 IKQLSIDELAC 253
+ ++ E C
Sbjct: 247 VAEVQKREFVC 257
Score = 181 (68.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 47/178 (26%), Positives = 91/178 (51%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ +V+++ F+ L L ++FS+N + + F + ++ L+ N ++
Sbjct: 529 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 588
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
++ F+ L L TL L I + + +F+GL S+ L L +N+ITT++ G+ L
Sbjct: 589 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLGSVRLLSLYDNQITTVAPGAFDSLHSL 648
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ ++I + C+
Sbjct: 649 STLNLLANPFNCNCHLAWLGEWLRR-KRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 705
Score = 166 (63.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 53/178 (29%), Positives = 81/178 (45%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I VI AF L LD S+N + + D F SL L L GN I
Sbjct: 302 ITEIRLEQNSIRVIPPGAFSPYKKLRRLDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTG 195
++ F+ L L L L+ I + AF L +L L L +NK+ T++ G+
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTVAKGTFSALRA 421
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ + L NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 422 IQTMHLAQNPFICDCHLKWLADYLHTNPIETS-GARCTSPRRLANKRIGQIKSKKFRC 478
Score = 162 (62.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 46/140 (32%), Positives = 66/140 (47%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+S CP+ C C V C NK L + +G+ + L GN + E
Sbjct: 716 LSRCPSECTCL----DTVVRCSNKGLKVLPKGIPKDVTELYLDGNQFTLVPKEL---SNY 768
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L I LS RIS + +++F +T L+ L S+N L+ +P TF SL L+L GN
Sbjct: 769 KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 828
Query: 135 IKQIKTGAFQPLSYLVTLEL 154
I + GAF LS L L +
Sbjct: 829 ISVVPEGAFNDLSALSHLAI 848
Score = 40 (19.1 bits), Expect = 3.9e-18, Sum P(2) = 3.9e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 529 SGSQCQEWGNVCYNRMQPMQH 549
+G C+E + C + P QH
Sbjct: 1021 TGELCEEKLDFCAQDLNPCQH 1041
>UNIPROTKB|Q6NUI6 [details] [associations]
symbol:CHADL "Chondroadherin-like protein" species:9606
"Homo sapiens" [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471095 GO:GO:0005578
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 EMBL:AL035681 EMBL:BC012882
EMBL:BC019839 EMBL:BC040188 EMBL:BC048421 EMBL:BC068590
IPI:IPI00402280 IPI:IPI00855816 RefSeq:NP_612490.1
UniGene:Hs.344488 HSSP:Q9BZR6 ProteinModelPortal:Q6NUI6 SMR:Q6NUI6
DMDM:158563972 PaxDb:Q6NUI6 PRIDE:Q6NUI6 Ensembl:ENST00000216241
GeneID:150356 KEGG:hsa:150356 UCSC:uc003azq.4 UCSC:uc010gyj.3
CTD:150356 GeneCards:GC22M041625 HGNC:HGNC:25165 HPA:HPA005696
HPA:HPA024654 neXtProt:NX_Q6NUI6 PharmGKB:PA162382224
eggNOG:NOG318740 HOGENOM:HOG000111626 HOVERGEN:HBG095510
InParanoid:Q6NUI6 OMA:ICDNSRR GenomeRNAi:150356 NextBio:86414
ArrayExpress:Q6NUI6 Bgee:Q6NUI6 CleanEx:HS_CHADL
Genevestigator:Q6NUI6 Uniprot:Q6NUI6
Length = 762
Score = 253 (94.1 bits), Expect = 5.1e-18, P = 5.1e-18
Identities = 61/189 (32%), Positives = 99/189 (52%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP +CIC ++ V C ++L V + + TQ LD GN LK + FQ G+ +L
Sbjct: 33 CPQACICD--NSRRHVACRYQNLTEVPDAIPELTQRLDLQGNLLKVIPAAAFQ--GVPHL 88
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ L C + ++ AFRGL L+ L+ + N L+ +P + SL +L L GN +++
Sbjct: 89 THLDLRHCEVELVAEGAFRGLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEE 148
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTG 195
++ G F L L TL L+ + + AF GL + WL+L +N ++ ++ + LP
Sbjct: 149 LRPGTFGALGALATLNLAHNALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPA- 207
Query: 196 LHGIDLHHN 204
L + LHHN
Sbjct: 208 LRRLSLHHN 216
Score = 230 (86.0 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 60/170 (35%), Positives = 87/170 (51%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ +YLS RI+ + A L L N L+ VP+ P+L++L LSGNP++
Sbjct: 547 LRWVYLSGNRITEVSLGALGPARELEKLHLDRNQLREVPTGALEGLPALLELQLSGNPLR 606
Query: 137 QIKTGAFQPLSY-LVTLELSKCGIEVIEDAAFVGLD-SLEWLKLDNNKITTISGSNILPT 194
++ GAFQP+ L L L+ G+E I AF GL L+ L L N++ + L +
Sbjct: 607 ALRDGAFQPVGRSLQHLFLNSSGLEQICPGAFSGLGPGLQSLHLQKNQLRALPALPSL-S 665
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIK 244
L IDL NP+ CDC L+ L RWL T + + C+ PP +K
Sbjct: 666 QLELIDLSSNPFHCDCQLLPLHRWL--TGLNLRVGATCATPPNARGQRVK 713
Score = 164 (62.8 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 47/175 (26%), Positives = 78/175 (44%)
Query: 13 KIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKM 72
+ V+ CP +C+C + + C L V G +TQ+LD N+ ++ F
Sbjct: 391 RAVAPCPRACVCVPESRHSS--CEGCGLQAVPRGFPSDTQLLDLRRNHFPSVPRAAFP-- 446
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL +L ++L C I+ +++ A GL L+ L S N L + + P L L L
Sbjct: 447 GLGHLVSLHLQHCGIAELEAGALAGLGRLIYLYLSDNQLAGLSAAALEGAPRLGYLYLER 506
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
N Q+ A + L L +L L ++ + +L W+ L N+IT +S
Sbjct: 507 NRFLQVPGAALRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVS 561
Score = 141 (54.7 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 56/200 (28%), Positives = 78/200 (39%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L+ N L L FQ GL+ ++ + LS +SV+ +A GL L L HN LQ
Sbjct: 163 LNLAHNALVYLPAMAFQ--GLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQA 220
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+P L +L L NP+ L L L L ++ + AF L
Sbjct: 221 LPGPVLSQARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRL 280
Query: 174 EWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICS 233
L L N++ T+ P L + L NP C C L WL + + D C
Sbjct: 281 HTLDLRGNQLDTLPPLQG-PGQLRRLRLQGNPLWCGCQARPLLEWLARAR--VRSDGACQ 337
Query: 234 VPPRLSSVTIKQLSIDELAC 253
P RL + L +L C
Sbjct: 338 GPRRLRGEALDALRPWDLRC 357
Score = 140 (54.3 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 53/186 (28%), Positives = 84/186 (45%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L + L+ + + +A GL +L L+ N L+ + TF +L L L+
Sbjct: 108 GLGRLLLLNLASNHLRELPQEALDGLGSLRRLELEGNALEELRPGTFGALGALATLNLAH 167
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + + AFQ L + L LS + V+ A GL +L L L +N++ + G +
Sbjct: 168 NALVYLPAMAFQGLLRVRWLRLSHNALSVLAPEALAGLPALRRLSLHHNELQALPGPVLS 227
Query: 193 PT-GLHGIDLHHNPWTC----DCLLI-GLRRWLESTKTPMAIDPICSVP-PRLSSVTIKQ 245
GL ++L HNP T D L + GLR L A+ P PRL ++ ++
Sbjct: 228 QARGLARLELGHNPLTYAGEEDGLALPGLRELLLDGGALQALGPRAFAHCPRLHTLDLRG 287
Query: 246 LSIDEL 251
+D L
Sbjct: 288 NQLDTL 293
Score = 38 (18.4 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 49 PNTQVLDYTGNNLKTL 64
P LD GN L TL
Sbjct: 278 PRLHTLDLRGNQLDTL 293
>MGI|MGI:1923481 [details] [associations]
symbol:Igsf10 "immunoglobulin superfamily, member 10"
species:10090 "Mus musculus" [GO:0001503 "ossification"
evidence=ISA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005021 "vascular endothelial growth factor-activated receptor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0042246 "tissue regeneration"
evidence=ISO] [GO:0048010 "vascular endothelial growth factor
receptor signaling pathway" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 InterPro:IPR009134 PRINTS:PR01832
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1923481 GO:GO:0005524
GO:GO:0005576 GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 MEROPS:I43.001 GO:GO:0048010 GO:GO:0005021
GO:GO:0038084 GeneTree:ENSGT00700000104014 CTD:285313
eggNOG:NOG239806 HOVERGEN:HBG107995 OMA:PYVSEDG OrthoDB:EOG45MN4F
EMBL:AC122038 EMBL:AK143421 EMBL:AC135238 EMBL:AK132367
EMBL:AK081990 IPI:IPI00405810 RefSeq:NP_001156356.1
UniGene:Mm.228086 UniGene:Mm.444186 HSSP:P07359
ProteinModelPortal:Q3V1M1 SMR:Q3V1M1 PhosphoSite:Q3V1M1
PRIDE:Q3V1M1 Ensembl:ENSMUST00000039419 GeneID:242050
KEGG:mmu:242050 UCSC:uc008piu.2 InParanoid:Q3V1M1 NextBio:385215
Bgee:Q3V1M1 CleanEx:MM_IGSF10 Genevestigator:Q3V1M1 Uniprot:Q3V1M1
Length = 2594
Score = 206 (77.6 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 85/297 (28%), Positives = 125/297 (42%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C + L ++ +G+ N + ++ N+L L F GL L
Sbjct: 29 CPRRCACYVP---TEVHCTFRYLTSIPDGIPANVERVNLGYNSLTRLTENDFS--GLSRL 83
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ + L I + K F GL +L L S+N +Q + DT SL +L L N I+
Sbjct: 84 ELLMLHSNGIHRVSDKTFSGLQSLQVLKMSYNKVQIIEKDTLYGLRSLTRLHLDHNNIEF 143
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE--------WLKLDNNKITTISGS 189
I AF L+ L + L + + FV L L+ +L L +N +T++
Sbjct: 144 INPEAFYGLTLLRLVHLEGNRLTKLHPDTFVSLSYLQIFKTSFIKYLYLSDNFLTSLPKE 203
Query: 190 NI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLS 247
+ +P L + LH NPWTCDC L L W++ P I C R+ S + +Q
Sbjct: 204 MVSSMPN-LESLYLHGNPWTCDCHLKWLSEWMQGN--PDIIK--CK-KERIPS-SPQQCP 256
Query: 248 IDELACEPQITPSTFYLEIQEGKNVSLLCKVSAI-PEAKITWLFDGVPIQNESMSAS 303
L P+I+ + G S LC I P K L G+ N S S S
Sbjct: 257 ---LCMNPRISKGRSIAMVPSG---SFLCTKPTIDPSLKSKSL--GIQEDNGSASVS 305
Score = 110 (43.8 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G V L C+V +P I+W+ + +E+ S V+ T +GT L+I+N +
Sbjct: 1731 GSTVKLKCRVEGMPRPTISWILANQTVVSETPEGSRK--VWVTPDGT------LIIHNLS 1782
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ D G + CVA N +G S I+++
Sbjct: 1783 LYDRGFYKCVANNPSGQDSLLVKIQVI 1809
Score = 82 (33.9 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 27/95 (28%), Positives = 47/95 (49%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ + L C + IP+A I+W+ +P +N S S S + GT L I +
Sbjct: 588 GEILDLPCLSTGIPDASISWI---LP-RNTVFSQS-SRDMQILNNGT------LRILQAT 636
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIVLK-EENVE 362
D G + CVA N +G+ S++ + + +K + +E
Sbjct: 637 PKDQGHYRCVAANPSGADFSSFQVSVQMKGQRTIE 671
Score = 73 (30.8 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 20/87 (22%), Positives = 39/87 (44%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ + L C +P+ +ITW G + + + + +GT L+I N
Sbjct: 2514 GEAMQLHCVALGVPKPQITWETPGYSLLSTATERRPHRSEMLPLQGT------LVIQNLR 2567
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIV 355
D+G + C A+N G+ + I+++
Sbjct: 2568 ASDSGVYKCRAQNVLGADYATTYIQVL 2594
Score = 68 (29.0 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 269 GKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNS 327
G+++ L C P+ + W L+DG ++ ++ S +Y GT L I N
Sbjct: 1828 GESLKLPCTAKGTPQPSVHWVLYDGTELKPLQLTHSRFF-LYPN--GT------LYIRNI 1878
Query: 328 NIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
GT+ C+A + +GS +R+ +E
Sbjct: 1879 VSSVRGTYECIATSSSGSERRVVILRVEEQE 1909
Score = 67 (28.6 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 24/90 (26%), Positives = 40/90 (44%)
Query: 269 GKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEI--KKSELLIY 325
G ++L C P + W L DG S+ A Y +E+G + KK +L +
Sbjct: 490 GGTIALDCPGKGDPSPHLEWVLADG----------SKVRAPYVSEDGRILIDKKGKLELQ 539
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ D G + C++ N A + Y I +V
Sbjct: 540 MADTFDAGLYHCISTNDADADILTYRITVV 569
Score = 42 (19.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 18/80 (22%), Positives = 34/80 (42%)
Query: 275 LCKVSAIPEAKITWLFDGVPIQNES---MSASESHAVYSTEEGTEIKKSELLIYNSNIDD 331
+C+ + E ++T + + S + + + + S E T +KK LL+ N D
Sbjct: 1056 MCRTCSSTE-RLTMATAALSVTGSSHTTLPKANNVGIISEESTTVVKKPSLLLKNKQDVD 1114
Query: 332 NGTFVCVAENQAGSTSSNYT 351
T + N S S++ T
Sbjct: 1115 IET-ITTTINYFRSESTHMT 1133
>UNIPROTKB|Q5VT99 [details] [associations]
symbol:LRRC38 "Leucine-rich repeat-containing protein 38"
species:9606 "Homo sapiens" [GO:0006811 "ion transport"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005216
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471167
HSSP:Q9BZR6 EMBL:AL603749 EMBL:AL354712 EMBL:BC016048
IPI:IPI00059708 RefSeq:NP_001010847.1 UniGene:Hs.657356
ProteinModelPortal:Q5VT99 SMR:Q5VT99 DMDM:74756785 PRIDE:Q5VT99
Ensembl:ENST00000376085 GeneID:126755 KEGG:hsa:126755
UCSC:uc001avb.3 CTD:126755 GeneCards:GC01M013801 HGNC:HGNC:27005
HPA:HPA038778 neXtProt:NX_Q5VT99 eggNOG:KOG0619
HOGENOM:HOG000113369 HOVERGEN:HBG094920 OMA:LDEIQCS
OrthoDB:EOG4GMTXN ChiTaRS:LRRC38 GenomeRNAi:126755 NextBio:81900
Bgee:Q5VT99 CleanEx:HS_LRRC38 Genevestigator:Q5VT99 Uniprot:Q5VT99
Length = 294
Score = 228 (85.3 bits), Expect = 5.9e-18, P = 5.9e-18
Identities = 63/212 (29%), Positives = 113/212 (53%)
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
++++K+ ++ RI I F +LV LDF +N L+++ TF L+ L LS N
Sbjct: 56 LDVRKLLVAGNRIQRIPEDFFIFYGDLVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNN 115
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--L 192
+ Q+ GAF+ LV L L+ + + + AF L+SL+ L+L++N + ++S + + L
Sbjct: 116 LTQLGAGAFRSAGRLVKLSLANNNLVGVHEDAFETLESLQVLELNDNNLRSLSVAALAAL 175
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLE--STKTPMAIDPI-CSVPPRLSSVTIKQLSID 249
P L + L NPW CDC L W++ ++K P +D I CS+P +++++LS
Sbjct: 176 PA-LRSLRLDGNPWLCDCDFAHLFSWIQENASKLPKGLDEIQCSLPMESRRISLRELSEA 234
Query: 250 ELA-CEPQITPSTFYLEIQEGKNVSLLCKVSA 280
+ C ++ + + I G VS+ +S+
Sbjct: 235 SFSECRFSLSLTDLCIIIFSGVAVSIAAIISS 266
Score = 157 (60.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 46/165 (27%), Positives = 76/165 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C TV+C ++ L +V + + + L GN ++ + + F G +
Sbjct: 27 ACPAGCACT---DPHTVDCRDRGLPSVPDPFPLDVRKLLVAGNRIQRIPEDFFIFYG--D 81
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L + + ++ F G LV LD S+N L + + F L+KL+L+ N +
Sbjct: 82 LVYLDFRNNSLRSLEEGTFSGSAKLVFLDLSYNNLTQLGAGAFRSAGRLVKLSLANNNLV 141
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ AF+ L L LEL+ + + AA L +L L+LD N
Sbjct: 142 GVHEDAFETLESLQVLELNDNNLRSLSVAALAALPALRSLRLDGN 186
>UNIPROTKB|E2RFX7 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 OMA:YFELKAN EMBL:AAEX03013284
RefSeq:XP_003639854.1 Ensembl:ENSCAFT00000008522 GeneID:100856466
KEGG:cfa:100856466 NextBio:20859498 Uniprot:E2RFX7
Length = 840
Score = 253 (94.1 bits), Expect = 6.0e-18, P = 6.0e-18
Identities = 76/242 (31%), Positives = 115/242 (47%)
Query: 18 CPTSCICK-WKGGKQTVECVNKSLITVVEGMDP--NTQVLDYTGNNLKTLHNEKFQKMGL 74
CP C CK V C +++ ++ + P N + L GN + TL K +
Sbjct: 329 CPIPCNCKVLSPSGLLVHCQERNIESLSDLKPPPQNPRKLVLAGNIIHTLM--KSDLVEY 386
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
L+ ++L RI V++ +F LT L L + N L + F +L L L N
Sbjct: 387 FTLEMLHLGNNRIEVLEEGSFINLTRLQKLYLNGNHLTKLSRGMFLGLHNLEYLYLEYNA 446
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
+K+I G F P+ L L L+ ++V+ F G+ SL + L N+ T + SNIL
Sbjct: 447 VKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGV-SLTRINLKTNQFTHLPVSNILDD 505
Query: 195 G--LHGIDLHHNPWTCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
L IDL NPW C C L+GL++WL+ +K + D +C+ P L +K L+ EL
Sbjct: 506 LDLLTQIDLEDNPWDCSCDLVGLQQWLQKLSKNTVTDDILCTSPEHLDKKELKALT-SEL 564
Query: 252 AC 253
C
Sbjct: 565 LC 566
Score = 239 (89.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 81/277 (29%), Positives = 127/277 (45%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVE-GMDPNTQV-LDYTGNNLKTLHNEKFQKMGL 74
+C + C C+ K G + C K + + + + P+ L N L LH F GL
Sbjct: 30 SCDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFHLSLLNNGLTMLHTNDFS--GL 87
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N ++L I+ I++ AF GL L L +HN L+ + DTF +L L N
Sbjct: 88 TNAISLHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
I I+ AF L+ L L L+ IE + F + L L L N++ T+ L
Sbjct: 148 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
G + + L N WTC+C L+ L+ WLE+ I D +C+ PP + +L + +
Sbjct: 207 IGRILDLQLEDNKWTCNCDLLELKIWLENMPPQSVIGDIVCNSPPFFKGSILSRLKKESI 266
Query: 252 ACEPQITPSTFYLEIQEGKNVSL-LCKVSAIPEAKIT 287
C P TP + E E + SL L S+I +++++
Sbjct: 267 -C-P--TPPVY--EEHEDPSGSLHLAATSSISDSRMS 297
>MGI|MGI:2679449 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2679449 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:84631 eggNOG:NOG147171
EMBL:AB097571 EMBL:AK044761 IPI:IPI00329847 RefSeq:NP_001154903.1
RefSeq:NP_942563.2 UniGene:Mm.336081 UniGene:Mm.403134
ProteinModelPortal:Q810C0 SMR:Q810C0 STRING:Q810C0
PhosphoSite:Q810C0 PaxDb:Q810C0 PRIDE:Q810C0
Ensembl:ENSMUST00000036043 Ensembl:ENSMUST00000166241 GeneID:245450
KEGG:mmu:245450 InParanoid:Q810C0 OrthoDB:EOG4GTKC9 NextBio:386711
Bgee:Q810C0 CleanEx:MM_SLITRK2 Genevestigator:Q810C0
GermOnline:ENSMUSG00000036790 Uniprot:Q810C0
Length = 846
Score = 253 (94.1 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 83/291 (28%), Positives = 132/291 (45%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGN 59
I + T + CP+SC+C + V C + T + + P + + L TGN
Sbjct: 328 IMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKF-TNISDLQPKPTSPKKLYLTGN 386
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+T++ + ++L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 387 YLQTVYKNDLLEYSSLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMF 444
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
SL L L N IK+IK F L L L L+ + + D F G +L L L
Sbjct: 445 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLR 503
Query: 180 NNKITTISGSNIL---PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
NN + + +L P + IDL NPW C C ++GL+ W E +P+ I+ + C P
Sbjct: 504 NNHFSHLPVKGVLDQLPAFIQ-IDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESP 562
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNV--SLLCKVSAIPE 283
+ + +K L + + E P ++ T L + + SL S+ PE
Sbjct: 563 AKHAGEILKFLGREAICPENPNLSDGTI-LSMNHNTDTPRSLSVSPSSYPE 612
Score = 221 (82.9 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 70/238 (29%), Positives = 105/238 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C C+C+ K + C NK TV P ++ L GN L L+ +F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
N ++L + I AF GL L L ++N L+ + DTF SL L N I
Sbjct: 87 NAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYI 146
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT- 194
I+ GAF L+ L L L+ + + F + L L L N++ + + +L
Sbjct: 147 STIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 195 -GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
G+ I L NPW C C L+ L+ WL+ T T + +C P RL + QL+ +L
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Score = 37 (18.1 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 585 PTHFPALVPATAYYRTLPHRRHTAANPNNRYSREAE 620
PT PAL P A + P + P S++ +
Sbjct: 288 PTTNPALNPTRAPKASRPPKMRNRPTPRVTVSKDRQ 323
>UNIPROTKB|Q9HBW1 [details] [associations]
symbol:LRRC4 "Leucine-rich repeat-containing protein 4"
species:9606 "Homo sapiens" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH236947
MEROPS:I43.001 InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000252924
HOVERGEN:HBG052359 EMBL:AF196976 EMBL:AJ297858 EMBL:AY358307
EMBL:AK172751 EMBL:AK314047 EMBL:BC111561 EMBL:BC111745
IPI:IPI00005516 RefSeq:NP_071426.1 UniGene:Hs.655003 PDB:2DL9
PDB:3ZYI PDBsum:2DL9 PDBsum:3ZYI ProteinModelPortal:Q9HBW1
SMR:Q9HBW1 STRING:Q9HBW1 PhosphoSite:Q9HBW1 DMDM:51701696
PaxDb:Q9HBW1 PRIDE:Q9HBW1 Ensembl:ENST00000249363 GeneID:64101
KEGG:hsa:64101 UCSC:uc003vmk.3 CTD:64101 GeneCards:GC07M127667
HGNC:HGNC:15586 MIM:610486 neXtProt:NX_Q9HBW1 PharmGKB:PA30463
InParanoid:Q9HBW1 KO:K16351 OMA:CGCEAVW OrthoDB:EOG4NGGM6
PhylomeDB:Q9HBW1 EvolutionaryTrace:Q9HBW1 GenomeRNAi:64101
NextBio:65940 ArrayExpress:Q9HBW1 Bgee:Q9HBW1 CleanEx:HS_LRRC4
Genevestigator:Q9HBW1 GermOnline:ENSG00000128594 InterPro:IPR026882
PANTHER:PTHR24369:SF9 Uniprot:Q9HBW1
Length = 653
Score = 251 (93.4 bits), Expect = 6.2e-18, P = 6.2e-18
Identities = 83/313 (26%), Positives = 142/313 (45%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N ++++ + F ++ +L ++ L + + I AF GL NL L+ ++ +P+
Sbjct: 157 NPIESIPSYAFNRVP--SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 214
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
T P L +L +SGN +I+ G+F LS L L + + +IE AF GL SL L
Sbjct: 215 T-P-LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272
Query: 178 LDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWL-ESTKTPMAIDPICSVP 235
L +N ++++ P L + LHHNPW CDC ++ L WL E T C P
Sbjct: 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 332
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVP 294
+ + ++ C P I + L I EG+ L C+ P + + WL
Sbjct: 333 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISEGRMAELKCRTP--PMSSVKWLLPNGT 390
Query: 295 IQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ + AS + +GT + S +L+ D G + C+ N AG+++++ + +
Sbjct: 391 VLSH---ASRHPRISVLNDGT-LNFSHVLL-----SDTGVYTCMVTNVAGNSNASAYLNV 441
Query: 355 VLKEENVEVVTVF 367
E N + F
Sbjct: 442 STAELNTSNYSFF 454
Score = 218 (81.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/205 (31%), Positives = 101/205 (49%)
Query: 4 WIFLIATIIKIVSACPTSC--ICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNL 61
WI L A I SA P +C +C V C + L V +G+ NT+ L+ NN+
Sbjct: 29 WI-LCAAIAAAASAGPQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNI 87
Query: 62 KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
+ + + F+ L +L+ + L R I I+ AF GL +L L+ N L +PS F
Sbjct: 88 QMIQADTFRH--LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 145
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDN 180
L +L L NPI+ I + AF + L+ L+L + +E I + AF GL +L++L L
Sbjct: 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 205
Query: 181 NKITTISGSNILP-TGLHGIDLHHN 204
I + N+ P GL +++ N
Sbjct: 206 CNIKDMP--NLTPLVGLEELEMSGN 228
Score = 130 (50.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L+ +GN+ + F GL +L+K+++ ++S+I+ AF GL +LV+L+ +HN L +
Sbjct: 223 LEMSGNHFPEIRPGSFH--GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280
Query: 114 VPSDTFPDYPSLMKLTLSGNP 134
+P D F L++L L NP
Sbjct: 281 LPHDLFTPLRYLVELHLHHNP 301
>UNIPROTKB|O94813 [details] [associations]
symbol:SLIT2 "Slit homolog 2 protein" species:9606 "Homo
sapiens" [GO:0001656 "metanephros development" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0060763
"mammary duct terminal end bud growth" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IMP] [GO:0050929 "induction of
negative chemotaxis" evidence=IDA] [GO:0050772 "positive regulation
of axonogenesis" evidence=TAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IDA] [GO:0009986
"cell surface" evidence=IDA] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0043237 "laminin-1 binding" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0050919 "negative chemotaxis" evidence=IDA;IMP] [GO:0030336
"negative regulation of cell migration" evidence=IMP;IDA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IDA;IMP] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IDA] [GO:0005095 "GTPase inhibitor activity"
evidence=IDA] [GO:0051058 "negative regulation of small GTPase
mediated signal transduction" evidence=IDA] [GO:0016020 "membrane"
evidence=NAS] [GO:0010596 "negative regulation of endothelial cell
migration" evidence=IDA] [GO:0043116 "negative regulation of
vascular permeability" evidence=IDA] [GO:0005509 "calcium ion
binding" evidence=NAS] [GO:0090024 "negative regulation of
neutrophil chemotaxis" evidence=IDA] [GO:0030837 "negative
regulation of actin filament polymerization" evidence=IDA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0002689 "negative regulation of leukocyte
chemotaxis" evidence=IDA] [GO:0043394 "proteoglycan binding"
evidence=IPI] [GO:0048846 "axon extension involved in axon
guidance" evidence=IDA] [GO:0071504 "cellular response to heparin"
evidence=IDA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IMP] [GO:0090260 "negative regulation of retinal
ganglion cell axon guidance" evidence=IDA] [GO:0061364 "apoptotic
process involved in luteolysis" evidence=IEP] [GO:0032870 "cellular
response to hormone stimulus" evidence=IEP] [GO:0051414 "response
to cortisol stimulus" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0021836 "chemorepulsion involved in postnatal
olfactory bulb interneuron migration" evidence=IDA] [GO:0008201
"heparin binding" evidence=IDA] [GO:0007411 "axon guidance"
evidence=IDA;TAS] [GO:0021834 "chemorepulsion involved in embryonic
olfactory bulb interneuron precursor migration" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005886
"plasma membrane" evidence=TAS] [GO:0035385 "Roundabout signaling
pathway" evidence=IC;IMP] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IMP] [GO:0030308
"negative regulation of cell growth" evidence=IMP] [GO:0090027
"negative regulation of monocyte chemotaxis" evidence=ISS]
[GO:0014912 "negative regulation of smooth muscle cell migration"
evidence=IDA] [GO:0002042 "cell migration involved in sprouting
angiogenesis" evidence=IMP] [GO:0071672 "negative regulation of
smooth muscle cell chemotaxis" evidence=IDA] [GO:0071676 "negative
regulation of mononuclear cell migration" evidence=IDA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IDA] [GO:0021972 "corticospinal neuron axon
guidance through spinal cord" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005886 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0008285
GO:GO:0005615 GO:GO:0042803 GO:GO:0009986 GO:GO:0030308
GO:GO:0001701 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201
Pathway_Interaction_DB:glypican_1pathway GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0050772 GO:GO:0005095 Reactome:REACT_96538 GO:GO:0016337
PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837 GO:GO:0010629
InterPro:IPR003645 InterPro:IPR001791 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:CH471069 GO:GO:0001656
GO:GO:0010596 GO:GO:0001657 GO:GO:0001933 GO:GO:0048754
GO:GO:0071676 GO:GO:0031290 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0060763 GO:GO:0070100 GO:GO:0090288 GO:GO:0043237
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0090027 GO:GO:0010593 GO:GO:0051414 GO:GO:0090260 PDB:2V9T
PDBsum:2V9T GO:GO:0021836 GO:GO:0035385 GO:GO:0061364
HOGENOM:HOG000116120 HOVERGEN:HBG057959 EMBL:AB017168 EMBL:AF055585
EMBL:AF133270 EMBL:BC117190 EMBL:BC143978 IPI:IPI00006288
IPI:IPI00220114 IPI:IPI00335003 RefSeq:NP_004778.1 UniGene:Hs.29802
PDB:2V70 PDB:2V9S PDB:2WFH PDBsum:2V70 PDBsum:2V9S PDBsum:2WFH
ProteinModelPortal:O94813 SMR:O94813 DIP:DIP-38198N IntAct:O94813
MINT:MINT-6768470 STRING:O94813 PhosphoSite:O94813 PaxDb:O94813
PRIDE:O94813 Ensembl:ENST00000503823 Ensembl:ENST00000503837
Ensembl:ENST00000504154 GeneID:9353 KEGG:hsa:9353 UCSC:uc003gpr.1
UCSC:uc003gps.1 CTD:9353 GeneCards:GC04P020254 HGNC:HGNC:11086
HPA:CAB007590 HPA:HPA019511 HPA:HPA023088 MIM:603746
neXtProt:NX_O94813 PharmGKB:PA35939 InParanoid:O94813 KO:K06839
PhylomeDB:O94813 EvolutionaryTrace:O94813 GenomeRNAi:9353
NextBio:35025 ArrayExpress:O94813 Bgee:O94813 CleanEx:HS_SLIT2
Genevestigator:O94813 GermOnline:ENSG00000145147 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 Uniprot:O94813
Length = 1529
Score = 268 (99.4 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 83/250 (33%), Positives = 116/250 (46%)
Query: 7 LIATIIKIV-SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH 65
++A + K+ ACP C C G TV+C +L +V + NT+ LD GNN+ +
Sbjct: 16 VLAILNKVAPQACPAQCSCS---GS-TVDCHGLALRSVPRNIPRNTERLDLNGNNITRIT 71
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F GL +L+ + L +IS I+ AF+ L L L + N LQ P F L
Sbjct: 72 KTDFA--GLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTAKL 129
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
+L LS N I+ I AF+ + L+L I IED AF L LE L L+NN IT
Sbjct: 130 YRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITR 189
Query: 186 ISGS--NILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTI 243
+S + N +P L LH N CDC L L WL + + + C P L +
Sbjct: 190 LSVASFNHMPK-LRTFRLHSNNLYCDCHLAWLSDWLRQ-RPRVGLYTQCMGPSHLRGHNV 247
Query: 244 KQLSIDELAC 253
++ E C
Sbjct: 248 AEVQKREFVC 257
Score = 185 (70.2 bits), Expect = 5.5e-09, Sum P(2) = 5.5e-09
Identities = 47/178 (26%), Positives = 91/178 (51%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ +V+++ F+ L L ++FS+N + + F + ++ L+ N ++
Sbjct: 537 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 596
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
++ F+ L L TL L I + + +F+GL S+ L L +N+ITT++ G+ L
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSL 656
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ ++I + C+
Sbjct: 657 STLNLLANPFNCNCYLAWLGEWLRK-KRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 713
Score = 172 (65.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 56/189 (29%), Positives = 83/189 (43%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I VI AF L +D S+N + + D F SL L L GN I
Sbjct: 302 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-G 195
++ F+ L L L L+ I + AF L +L L L +NK+ TI+ P
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 421
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-- 253
+ + L NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 422 IQTMHLAQNPFICDCHLKWLADYLHTNPIETS-GARCTSPRRLANKRIGQIKSKKFRCSA 480
Query: 254 -EPQITPST 261
E P T
Sbjct: 481 KEQYFIPGT 489
Score = 165 (63.1 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 47/140 (33%), Positives = 66/140 (47%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+S CPT C C V C NK L + +G+ + L GN + E
Sbjct: 724 LSRCPTECTCL----DTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFTLVPKEL---SNY 776
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L I LS RIS + +++F +T L+ L S+N L+ +P TF SL L+L GN
Sbjct: 777 KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 836
Query: 135 IKQIKTGAFQPLSYLVTLEL 154
I + GAF LS L L +
Sbjct: 837 ISVVPEGAFNDLSALSHLAI 856
Score = 138 (53.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 50/162 (30%), Positives = 69/162 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C+ G TV+C N+ L + E + T L N L K L
Sbjct: 505 ACPEKCRCE---GT-TVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 559
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI S +I+ I+ AF G + + ++ + N L+ V F SL L L N I
Sbjct: 560 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT 619
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
+ +F LS + L L I + AF L SL L L
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNL 661
Score = 40 (19.1 bits), Expect = 6.5e-18, Sum P(2) = 6.5e-18
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 529 SGSQCQEWGNVCYNRMQPMQH 549
+G C+E + C + P QH
Sbjct: 1029 TGELCEEKLDFCAQDLNPCQH 1049
>MGI|MGI:106038 [details] [associations]
symbol:Lrrn1 "leucine rich repeat protein 1, neuronal"
species:10090 "Mus musculus" [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
MGI:MGI:106038 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:D45913 EMBL:AK173186 EMBL:AK139355
EMBL:AK139965 EMBL:AK160841 EMBL:BC031122 EMBL:BC058701
IPI:IPI00126070 RefSeq:NP_032542.1 UniGene:Mm.428543
UniGene:Mm.488119 ProteinModelPortal:Q61809 SMR:Q61809
STRING:Q61809 PaxDb:Q61809 PRIDE:Q61809 Ensembl:ENSMUST00000049285
GeneID:16979 KEGG:mmu:16979 UCSC:uc009ddd.1 InParanoid:Q61809
ChiTaRS:LRRN1 NextBio:291056 Bgee:Q61809 CleanEx:MM_LRRN1
Genevestigator:Q61809 GermOnline:ENSMUSG00000034648 Uniprot:Q61809
Length = 716
Score = 251 (93.4 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 80/295 (27%), Positives = 139/295 (47%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL +L+ + ++ + A + + NL LD + N + + F + L +L ++
Sbjct: 236 VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 132 G-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGS 189
+ + A L L LE + + I AF + +LE L L+NN + +
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQK 355
Query: 190 NI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPI---CSVPPRLSSVTI 243
+ LP L I +H NP CDC++ W+ S KT + ++P+ C++PP +
Sbjct: 356 TVESLPN-LREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYRGQQV 410
Query: 244 KQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
K++ I + + C P I+ TF +L + G + L C+ A PE +I W+ PI N+
Sbjct: 411 KEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTLFLDCRAMAEPEPEIYWV---TPIGNKI 467
Query: 300 MSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ S + EGT L I N I+D+G + CVA+N G+ + TI++
Sbjct: 468 TVETLSDKYKLSSEGT------LEIANIQIEDSGRYTCVAQNVQGADTRVATIKV 516
Score = 180 (68.4 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 48/133 (36%), Positives = 72/133 (54%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L NLQ++Y++ +IS I + AF GL NL+ L + N L+ + S F P+L L + N
Sbjct: 142 LSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
P+ I F+PLS L +L L+ + + A VGLDSLE L +NK+ + +
Sbjct: 202 PVIGILDMNFRPLSNLRSLVLAGMYLTDVPGNALVGLDSLESLSFYDNKLIKVPQLALQK 261
Query: 194 T-GLHGIDLHHNP 205
L +DL+ NP
Sbjct: 262 VPNLKFLDLNKNP 274
Score = 153 (58.9 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 51/190 (26%), Positives = 83/190 (43%)
Query: 14 IVSACPTSCICK---WKGGKQT------VECVNKSLITVVEGMDPNTQVLDYTGNNL-KT 63
+ S CP C+C+ W + T V+C + L + + +TQVL NN+ KT
Sbjct: 28 LTSECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKT 87
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
+ ++ Q+ L NL ++ S+ + I LT L L N + + D
Sbjct: 88 V--DELQQ--LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLS 143
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
+L +L ++ N I I AF L L+ L L+ ++VI+ F +LE L + N +
Sbjct: 144 NLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPV 203
Query: 184 TTISGSNILP 193
I N P
Sbjct: 204 IGILDMNFRP 213
Score = 125 (49.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKI---YLSRCRISVIDSKAFRGLTNLVDLDF 106
N LD++ NN + +++GL NL ++ +L +IS + + L+NL +L
Sbjct: 96 NLTELDFSQNNFTNI-----KEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYI 150
Query: 107 SHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAA 166
+HN + T+ ++ F +L++L L+ N +K I + F L L + + + I D
Sbjct: 151 NHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN 210
Query: 167 FVGLDSLEWLKLDNNKITTISGSNILPTGLHGID 200
F L +L L L +T + G+ ++ GL ++
Sbjct: 211 FRPLSNLRSLVLAGMYLTDVPGNALV--GLDSLE 242
Score = 48 (22.0 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 487 EQNPDLVNDAESVDKDRRAQGGEDTQDTQDKASEA 521
E P L+N E+ D D+ G DT+ TQ S +
Sbjct: 679 ELYPPLINLWEA-DSDKDKDGSADTKPTQVDTSRS 712
>UNIPROTKB|F1NXL1 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:WFREARV
EMBL:AADN02050753 IPI:IPI00574718 ProteinModelPortal:F1NXL1
Ensembl:ENSGALT00000038761 Uniprot:F1NXL1
Length = 306
Score = 227 (85.0 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 65/201 (32%), Positives = 94/201 (46%)
Query: 49 PNTQVLDYTGN-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFS 107
P + LD N +L+ L + F GL LQ ++L RC+++ + S FRGL +L L
Sbjct: 101 PALEELDLGDNPHLRVLAPDTFH--GLRRLQALHLYRCQLASLPSAIFRGLHSLQYLYLQ 158
Query: 108 HNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
N L + D F D +L L L GN ++ + G F+ L L L L + + AF
Sbjct: 159 ENGLLYLQDDLFADLANLSHLFLHGNRLRALSEGVFRGLPSLDRLLLHANRLATVHRRAF 218
Query: 168 VGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTP 225
GL L L L NN + + G + LP L + L+ NPW CDC L W T+
Sbjct: 219 RGLARLTILYLFNNSLAALPGDPLAALPA-LQFLRLNANPWACDCRARPLWAWFRRTRVS 277
Query: 226 MAIDPICSVPPRLSSVTIKQL 246
+ P C+ PP ++ L
Sbjct: 278 SSPVP-CASPPHRRGTDLRHL 297
Score = 132 (51.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 53/192 (27%), Positives = 79/192 (41%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C TV C + +V G+ P + L N ++ L F +
Sbjct: 25 ACPALCTCYVS--PPTVSCQANNFSSVPTGLPPGARRLFLQNNVIRALRAGTFGPSTVT- 81
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYPSLMKLTLSGNPI 135
++L IS I FR L L +LD N L+ + DTF L L L +
Sbjct: 82 ---LWLYSNNISSIQPGTFRHLPALEELDLGDNPHLRVLAPDTFHGLRRLQALHLYRCQL 138
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ + F+ L L L L + G+ ++D F L +L L L N++ +S + G
Sbjct: 139 ASLPSAIFRGLHSLQYLYLQENGLLYLQDDLFADLANLSHLFLHGNRLRALS-EGVF-RG 196
Query: 196 LHGID---LHHN 204
L +D LH N
Sbjct: 197 LPSLDRLLLHAN 208
>RGD|1564145 [details] [associations]
symbol:Lrrn1 "leucine rich repeat neuronal 1" species:10116
"Rattus norvegicus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 RGD:1564145 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 CTD:57633 GeneTree:ENSGT00690000102097
HOGENOM:HOG000252914 HOVERGEN:HBG052361 OMA:GINNMGE
OrthoDB:EOG4XKV6G EMBL:BC107902 IPI:IPI00191618
RefSeq:NP_001032440.1 UniGene:Rn.96330 ProteinModelPortal:Q32Q07
STRING:Q32Q07 PhosphoSite:Q32Q07 Ensembl:ENSRNOT00000008879
GeneID:500280 KEGG:rno:500280 UCSC:RGD:1564145 InParanoid:Q32Q07
NextBio:705687 Genevestigator:Q32Q07 GermOnline:ENSRNOG00000006802
Uniprot:Q32Q07
Length = 716
Score = 251 (93.4 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 80/295 (27%), Positives = 139/295 (47%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL +L+ + ++ + A + + NL LD + N + + F + L +L ++
Sbjct: 236 VGLDSLESLSFYDNKLIKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 132 G-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGS 189
+ + A L L LE + + I AF + +LE L L+NN + +
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQK 355
Query: 190 NI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPI---CSVPPRLSSVTI 243
+ LP L I +H NP CDC++ W+ S KT + ++P+ C++PP +
Sbjct: 356 TVESLPN-LREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYRGQQV 410
Query: 244 KQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
K++ I + + C P I+ TF +L + G + L C+ A PE +I W+ PI N+
Sbjct: 411 KEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTLFLDCRAMAEPEPEIYWV---TPIGNKI 467
Query: 300 MSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ S + EGT L I N I+D+G + CVA+N G+ + TI++
Sbjct: 468 TVETLSDKYKLSSEGT------LEIANIQIEDSGRYTCVAQNVQGADTRVATIKV 516
Score = 179 (68.1 bits), Expect = 6.5e-10, Sum P(2) = 6.5e-10
Identities = 49/133 (36%), Positives = 72/133 (54%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L NLQ++Y++ +IS I + AF GL NL+ L + N L+ + S F P+L L + N
Sbjct: 142 LSNLQELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
P+ I F+PLS L +L L+ + I A VGLDSLE L +NK+ + +
Sbjct: 202 PVIGILDMNFRPLSNLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLIKVPQLALQK 261
Query: 194 T-GLHGIDLHHNP 205
L +DL+ NP
Sbjct: 262 VPNLKFLDLNKNP 274
Score = 152 (58.6 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 51/188 (27%), Positives = 82/188 (43%)
Query: 16 SACPTSCICK---WKGGKQT------VECVNKSLITVVEGMDPNTQVLDYTGNNL-KTLH 65
S CP C+C+ W + T V+C + L + + +TQVL NN+ KT+
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPGNLSSDTQVLLLQSNNIAKTV- 88
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
++ Q+ L NL ++ S+ + I LT L L N + + D +L
Sbjct: 89 -DELQQ--LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNL 145
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
+L ++ N I I AF L L+ L L+ ++VI+ F +LE L + N +
Sbjct: 146 QELYINHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG 205
Query: 186 ISGSNILP 193
I N P
Sbjct: 206 ILDMNFRP 213
Score = 122 (48.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 40/154 (25%), Positives = 76/154 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKI---YLSRCRISVIDSKAFRGLTNLVDLDF 106
N LD++ NN + +++GL NL ++ +L +IS + + L+NL +L
Sbjct: 96 NLTELDFSQNNFTNI-----KEVGLANLTQLTTLHLEENQISEMTDYCLQDLSNLQELYI 150
Query: 107 SHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAA 166
+HN + ++ ++ F +L++L L+ N +K I + F L L + + + I D
Sbjct: 151 NHNQISSISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN 210
Query: 167 FVGLDSLEWLKLDNNKITTISGSNILPTGLHGID 200
F L +L L L +T I G+ ++ GL ++
Sbjct: 211 FRPLSNLRSLVLAGMYLTDIPGNALV--GLDSLE 242
Score = 47 (21.6 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 487 EQNPDLVNDAESVDKDRRAQGGEDTQDTQDKASEA 521
E P L+N E D D+ G DT+ TQ S +
Sbjct: 679 ELYPPLINLWEG-DSDKDKDGSADTKPTQVDTSRS 712
>UNIPROTKB|Q96NI6 [details] [associations]
symbol:LRFN5 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:AK055365 EMBL:AK096627 EMBL:AL138498
EMBL:BC043165 IPI:IPI00396961 RefSeq:NP_689660.2 UniGene:Hs.136893
ProteinModelPortal:Q96NI6 SMR:Q96NI6 STRING:Q96NI6
PhosphoSite:Q96NI6 DMDM:116242620 PaxDb:Q96NI6 PRIDE:Q96NI6
DNASU:145581 Ensembl:ENST00000298119 GeneID:145581 KEGG:hsa:145581
UCSC:uc001wvm.3 CTD:145581 GeneCards:GC14P042076 HGNC:HGNC:20360
HPA:HPA001177 MIM:612811 neXtProt:NX_Q96NI6 PharmGKB:PA134888453
eggNOG:NOG249839 InParanoid:Q96NI6 KO:K16358 OMA:NAQCCKA
OrthoDB:EOG4X6C81 PhylomeDB:Q96NI6 GenomeRNAi:145581 NextBio:85141
ArrayExpress:Q96NI6 Bgee:Q96NI6 CleanEx:HS_LRFN5
Genevestigator:Q96NI6 GermOnline:ENSG00000165379 InterPro:IPR026879
PANTHER:PTHR24373:SF3 Uniprot:Q96NI6
Length = 719
Score = 249 (92.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 96/345 (27%), Positives = 157/345 (45%)
Query: 30 KQTVEC-VNKSLITVVEGMD-PN-TQVLDYT--GNNLKTLHNEKFQKMGLVNLQKIYLSR 84
++TVE + + +T ++ D N T ++D T N + + F L NL+ ++L+
Sbjct: 51 RRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFAD--LRNLRALHLNS 108
Query: 85 CRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQ 144
R++ I + F GL+NL L ++N L + S F D +L +L LS N ++ I A +
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVE 168
Query: 145 PLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT------------TISGSNIL 192
+ L TL L I+ I F L + L + +NK+ ++ S I+
Sbjct: 169 KMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGII 228
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
+ NP C+C L+ LRR S + + C+ PP L+ + +E
Sbjct: 229 SPSTFALSFGGNPLHCNCELLWLRRL--SREDDLET---CASPPLLTGRYFWSIPEEEFL 283
Query: 253 CEPQ-ITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYS 310
CEP IT T + + EG+ +L CK PE I W+ +G I N + S VY
Sbjct: 284 CEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSL-----VY- 337
Query: 311 TEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ GT ++LI + + D G F C+A N AG + + I+
Sbjct: 338 -DNGT----LDILI--TTVKDTGAFTCIASNPAGEATQIVDLHII 375
Score = 193 (73.0 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 57/186 (30%), Positives = 84/186 (45%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+++++FLI +K CP C+C+ C K L+ V +D T L N
Sbjct: 4 ILFYLFLIGIAVK-AQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNF 62
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
+ + + F M +L + LSR IS I AF L NL L + N L + +D F
Sbjct: 63 VTNIKRKDFANM--TSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFS 120
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
+L L L+ N + I + AF + L L+LS +E I A + SL L LD+
Sbjct: 121 GLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDH 180
Query: 181 NKITTI 186
N I I
Sbjct: 181 NMIDNI 186
>UNIPROTKB|F1Q057 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EPVITWN
EMBL:AAEX03010629 EMBL:AAEX03010630 EMBL:AAEX03010631
EMBL:AAEX03010632 EMBL:AAEX03010633 EMBL:AAEX03010634
PeroxiBase:10035 Ensembl:ENSCAFT00000005177 Uniprot:F1Q057
Length = 1408
Score = 253 (94.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 81/273 (29%), Positives = 129/273 (47%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I AFR L NL L ++N ++++P +F D +L L L N I+ I AF+
Sbjct: 6 RIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDRQAFKG 65
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNILPTGLHGIDLHHN 204
L+ L L L IE ++ +F L LE L L NN+IT + G+ + + L N
Sbjct: 66 LASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMKRLRLDSN 125
Query: 205 PWTCDCLLIGLRRWLES-TKTPMA-IDPICSVPPRLSSVTIKQLSIDELACE-PQITPST 261
CDC ++ L L++ K+ A C P R+ ++ ++ +EL CE P+IT
Sbjct: 126 ALHCDCEILWLADLLKTYAKSGNAQAAATCEYPRRIQGRSVATITPEELDCERPRITSEP 185
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSE 321
++ G V C+ P+ +I WL + N +S + ++GT
Sbjct: 186 QDADVTSGNTVFFTCRAEGNPKPEIIWLRN-----NNELSMKTDSRLNLLDDGT------ 234
Query: 322 LLIYNSNIDDNGTFVCVAENQAGSTSSN-YTIR 353
L+I N+ D G + C+A+N AG + T+R
Sbjct: 235 LMIQNTQETDQGIYQCMAKNVAGQVKTQEVTLR 267
Score = 132 (51.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N +K++ F+ L NL+ +YL + I ID +AF+GL +L L N
Sbjct: 22 NTLLLN--NNQIKSIPGGSFED--LENLKYLYLYKNEIQAIDRQAFKGLASLEQLYLHFN 77
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSK----CGIEVI 162
++T+ ++F P L +L L N I + G F L + L L C E++
Sbjct: 78 QIETLDPESFQHLPKLERLFLHNNRITHLVPGTFDHLESMKRLRLDSNALHCDCEIL 134
Score = 121 (47.7 bits), Expect = 2.4e-08, Sum P(2) = 2.4e-08
Identities = 44/121 (36%), Positives = 59/121 (48%)
Query: 105 DFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIED 164
D N ++ + F +L L L+ N IK I G+F+ L L L L K I+ I+
Sbjct: 1 DLRFNRIREIQPGAFRKLRNLNTLLLNNNQIKSIPGGSFEDLENLKYLYLYKNEIQAIDR 60
Query: 165 AAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLEST 222
AF GL SLE L L N+I T+ + LP L + LH+N T L+ G LES
Sbjct: 61 QAFKGLASLEQLYLHFNQIETLDPESFQHLPK-LERLFLHNNRITH--LVPGTFDHLESM 117
Query: 223 K 223
K
Sbjct: 118 K 118
Score = 99 (39.9 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 33/115 (28%), Positives = 50/115 (43%)
Query: 245 QLSIDELACEPQITPSTFY-----LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
Q ++ L +P++TP F + + G NV L C PE ITW DGV +
Sbjct: 444 QRAVAHLTVQPRVTP-VFASIPSDMTVDVGSNVQLPCSSQGEPEPAITWNKDGVQV---- 498
Query: 300 MSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ES + + EG L I++ D G + CVA N G S + + +
Sbjct: 499 ---TESGKFHISPEGF------LTIHDVGTADAGRYECVARNTIGQASVSMVLSV 544
Score = 69 (29.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 26/91 (28%), Positives = 35/91 (38%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
PQ T + + EG+ V C+ P+ I W G +S H V S+ G
Sbjct: 366 PQFTVTPEDRAVIEGQTVDFQCEAKGYPQPVIAWTKGG-----SQLSVDRRHLVLSS--G 418
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
T L I + D G + C A N GS
Sbjct: 419 T------LRISGVALHDQGQYECQAVNIIGS 443
Score = 67 (28.6 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 25/82 (30%), Positives = 34/82 (41%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
E+ G++V+L C + P +ITW D P+ E V T G L
Sbjct: 285 EVLVGESVTLECSATGHPPPRITWTKGDRTPLP-------EDPRVSITPSGG------LF 331
Query: 324 IYNSNIDDNGTFVCVAENQAGS 345
I N DD+G + C A N S
Sbjct: 332 IQNVLQDDSGEYTCFASNSVES 353
>RGD|1561361 [details] [associations]
symbol:Slitrk2 "SLIT and NTRK-like family, member 2"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1561361 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:LQADYNY OrthoDB:EOG4GTKC9
IPI:IPI00361290 Ensembl:ENSRNOT00000015401 Uniprot:D3ZK41
Length = 846
Score = 250 (93.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 83/291 (28%), Positives = 132/291 (45%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGN 59
I + T + CP+SC+C + V C + T + + P + + L TGN
Sbjct: 328 IMVYQTKSPVALTCPSSCVCTSQSSDNGLNVNCQERKF-TNISDLQPKPTSPKKLYLTGN 386
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+T++ K + +L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 387 YLQTVY--KNDLLEYTSLDLLHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMF 444
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
SL L L N IK+IK F L L L L+ + + D F G +L L L
Sbjct: 445 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLR 503
Query: 180 NNKITTISGSNIL---PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
NN + + +L P + IDL NPW C C ++GL+ W E +P+ I+ + C P
Sbjct: 504 NNHFSHLPVKGVLDQLPAFIQ-IDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESP 562
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNV--SLLCKVSAIPE 283
+ + +K L + + + P ++ T L + + SL S+ PE
Sbjct: 563 AKHAGEILKFLGREAICPDNPNLSDGTV-LSMNHNTDTPRSLSVSPSSYPE 612
Score = 227 (85.0 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 75/257 (29%), Positives = 114/257 (44%)
Query: 5 IFLIATIIKIVSA------CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDY 56
+F +A I++I S C C+C+ K + C NK TV P ++ L
Sbjct: 10 VFTVAGILQIESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFL 69
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
GN L L+ +F + N ++L + I AF GL L L ++N L+ +
Sbjct: 70 NGNLLTRLYPNEF--VNYSNAVTLHLGNNGLQEIRPGAFSGLKTLKRLHLNNNKLEVLRE 127
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
DTF SL L N I I+ GAF L+ L L L+ + + F + L L
Sbjct: 128 DTFLGLESLEYLQADYNYISTIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHL 186
Query: 177 KLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSV 234
L N++ + + +L G+ I L NPW C C L+ L+ WL+ T T + +C
Sbjct: 187 DLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCET 245
Query: 235 PPRLSSVTIKQLSIDEL 251
P RL + QL+ +L
Sbjct: 246 PFRLHGKDVTQLTRQDL 262
Score = 37 (18.1 bits), Expect = 7.2e-14, Sum P(2) = 7.2e-14
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 585 PTHFPALVPATAYYRTLPHRRHTAANPNNRYSREAE 620
PT PAL P A + P + P S++ +
Sbjct: 288 PTMNPALNPTRAPKASRPPKMRNRPTPRVTVSKDRQ 323
>UNIPROTKB|F1NN41 [details] [associations]
symbol:PXDN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042744 "hydrogen peroxide catabolic process" evidence=IEA]
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030198 GO:GO:0020037 GO:GO:0031012 GO:GO:0004601
InterPro:IPR013098 Pfam:PF07679 GO:GO:0042744 SUPFAM:SSF48113
GO:GO:0005201 Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325
OMA:EPVITWN EMBL:AADN02002863 EMBL:AADN02002864 IPI:IPI00586612
Ensembl:ENSGALT00000026413 Uniprot:F1NN41
Length = 1416
Score = 253 (94.1 bits), Expect = 1.3e-17, P = 1.3e-17
Identities = 81/275 (29%), Positives = 127/275 (46%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I FR L NL L ++N ++ +PS F D +L L L N I+ I AF+
Sbjct: 9 RIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDRQAFKG 68
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNILPTGLHGIDLHHN 204
L+ L L L IE ++ +F L LE L L NN+I I G+ + + L N
Sbjct: 69 LASLEQLYLHFNQIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESMKRLRLDSN 128
Query: 205 PWTCDCLLIGL----RRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE-PQITP 259
CDC ++ L + ++ES A C P R+ ++ ++ +EL CE P+IT
Sbjct: 129 ALHCDCEILWLAELLKTYVESGNAQAAAT--CEYPRRIQGRSVATITPEELNCERPRITS 186
Query: 260 STFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKK 319
+++ G V C+ P+ +I WL + N + E + ++GT
Sbjct: 187 EPQDVDVTSGNTVYFTCRAEGNPKPEIIWLRN-----NNELIMKEDSRLNLLDDGT---- 237
Query: 320 SELLIYNSNIDDNGTFVCVAENQAGSTSSN-YTIR 353
L+I N+ D G + C+A+N AG + T+R
Sbjct: 238 --LMIQNTQETDQGIYQCMAKNVAGEVKTQEVTLR 270
Score = 127 (49.8 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 36/117 (30%), Positives = 58/117 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N +K + + F+ L NL+ +YL + I ID +AF+GL +L L N
Sbjct: 25 NTLLLN--NNQIKRIPSGAFED--LENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFN 80
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSK----CGIEVI 162
++T+ ++F P L +L L N I + G F L + L L C E++
Sbjct: 81 QIETLDPESFTHLPKLERLFLHNNRIAHLIPGTFSHLESMKRLRLDSNALHCDCEIL 137
Score = 123 (48.4 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 44/121 (36%), Positives = 60/121 (49%)
Query: 105 DFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIED 164
D N ++ + F +L L L+ N IK+I +GAF+ L L L L K I+ I+
Sbjct: 4 DLRFNRIKEIQPGEFRRLKNLNTLLLNNNQIKRIPSGAFEDLENLKYLYLYKNEIQSIDR 63
Query: 165 AAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLEST 222
AF GL SLE L L N+I T+ + LP L + LH+N L+ G LES
Sbjct: 64 QAFKGLASLEQLYLHFNQIETLDPESFTHLPK-LERLFLHNN--RIAHLIPGTFSHLESM 120
Query: 223 K 223
K
Sbjct: 121 K 121
Score = 91 (37.1 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 31/109 (28%), Positives = 48/109 (44%)
Query: 251 LACEPQITPSTFY-----LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASES 305
L +P++TP F + ++ G NV + C PE ITW DGV + +ES
Sbjct: 453 LTVQPRVTP-VFASVPSDMTVEVGTNVQIPCSAQGEPEPVITWNKDGVQV-------TES 504
Query: 306 HAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ + EG L I + D G + CVA N G +S + + +
Sbjct: 505 GKFHVSPEGY------LTIRDVGTADEGRYECVARNTIGYSSVSMVLSV 547
Score = 69 (29.3 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 28/111 (25%), Positives = 50/111 (45%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
E+ G++V+L C + P+ +ITW D P+ ++ + T G L
Sbjct: 288 EVLVGESVTLECSATGHPQPQITWTKGDRTPLPSDPR-------ITITPSGG------LY 334
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLI 374
I N +D+G + C A N G+ + T I+++ + TV P + +I
Sbjct: 335 IQNVKQEDSGEYTCFATNSIGNIHA--TAYIIVQA--LPQFTVTPQDKTVI 381
Score = 67 (28.6 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 25/91 (27%), Positives = 38/91 (41%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
PQ T + + EG+ V C+ P+ I W G +S H V S+ G
Sbjct: 369 PQFTVTPQDKTVIEGQTVDFPCEAQGYPQPVIAWTKGG-----GQLSVDRRHLVLSS--G 421
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
T ++ S + ++ D G + C A N GS
Sbjct: 422 T-LRISRVALH-----DQGQYECQAVNIIGS 446
Score = 48 (22.0 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 218 WLESTKTPMAIDPICSVPPR--LSSVTIKQLSIDELAC 253
W + +TP+ DP ++ P L +KQ E C
Sbjct: 311 WTKGDRTPLPSDPRITITPSGGLYIQNVKQEDSGEYTC 348
>MGI|MGI:2443198 [details] [associations]
symbol:Slitrk6 "SLIT and NTRK-like family, member 6"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2443198 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409
GeneTree:ENSGT00680000099859 HOGENOM:HOG000290667
HOVERGEN:HBG056407 CTD:84189 eggNOG:NOG113965 OMA:YFELKAN
OrthoDB:EOG4X0MRT EMBL:AB097575 EMBL:AK029275 IPI:IPI00223927
RefSeq:NP_780708.1 UniGene:Mm.49728 ProteinModelPortal:Q8C110
SMR:Q8C110 STRING:Q8C110 PhosphoSite:Q8C110 PRIDE:Q8C110
Ensembl:ENSMUST00000078386 GeneID:239250 KEGG:mmu:239250
InParanoid:Q8C110 NextBio:384048 Bgee:Q8C110 CleanEx:MM_SLITRK6
Genevestigator:Q8C110 GermOnline:ENSMUSG00000045871 Uniprot:Q8C110
Length = 840
Score = 249 (92.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 76/245 (31%), Positives = 113/245 (46%)
Query: 15 VSACPTSCICK-WKGGKQTVECVNKSLITVVEGMDP--NTQVLDYTGNNLKTLHNEKFQK 71
V CP C CK + C +++ ++ + P N + L GN + TL K
Sbjct: 325 VPYCPIPCNCKVLSPSGLLIHCQERNIESLSDLQPPPHNPRKLILAGNIIHTLM--KSDL 382
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
L+ ++L RI V++ +F LT L L + N L + F SL L L
Sbjct: 383 TDYFTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLNKGMFLGLHSLEYLYLE 442
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
N +K+I G F P+ L L L+ ++V+ F+G+ L + L N+ T + SNI
Sbjct: 443 YNAVKEILPGTFNPMPKLKVLYLNNNLLQVLPAHIFLGIP-LTRVNLKTNQFTHLPVSNI 501
Query: 192 LPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAIDPICSVPPRLSSVTIKQLSI 248
L L IDL NPW C C L+GL++W+ K M D +C+ P L +K L+
Sbjct: 502 LDDLDFLIQIDLEDNPWDCSCDLVGLQQWIHKLGKGTMTDDILCTSPGHLDKKELKALNS 561
Query: 249 DELAC 253
D L C
Sbjct: 562 D-LLC 565
Score = 245 (91.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 84/277 (30%), Positives = 125/277 (45%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVE-GMDPNTQV-LDYTGNNLKTLHNEKFQKMGL 74
+C T C C+ K G + C K + + + + P+ L N L LH F GL
Sbjct: 30 SCDTLCNCEEKDGIMIINCEEKGINKLSQISVPPSRPFHLSLLNNGLTMLHTNDFS--GL 87
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N I+L I+ I++ AF GL L L +HN L+ + DTF +L L N
Sbjct: 88 TNALSIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
I I+ AF L+ L L L+ IE + F + L L L N++ T+ L
Sbjct: 148 ITIIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI--DPICSVPPRLSSVTIKQLSIDE 250
G + + L N W C+C L+ L+ WLE+ P +I D IC PP + +L E
Sbjct: 207 IGRILDLQLEDNKWACNCELLQLKNWLENMP-PQSIIGDVICYSPPPFKGSVLSRLK-KE 264
Query: 251 LACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT 287
C P TP + E E + SLL S+ +++++
Sbjct: 265 SFC-P--TPPVY--EEHEDPSGSLLAITSSTSDSRLS 296
>MGI|MGI:3609246 [details] [associations]
symbol:Lingo3 "leucine rich repeat and Ig domain containing
3" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:3609246 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HSSP:Q05793 HOVERGEN:HBG057546 CTD:645191
OMA:EIDNWPL OrthoDB:EOG4THVSV EMBL:AC166937 EMBL:BC072620
IPI:IPI00131641 RefSeq:NP_001013780.2 UniGene:Mm.40213
ProteinModelPortal:Q6GQU6 SMR:Q6GQU6 PhosphoSite:Q6GQU6
PRIDE:Q6GQU6 Ensembl:ENSMUST00000053986 GeneID:237403
KEGG:mmu:237403 UCSC:uc007gey.2 InParanoid:Q6GQU6 NextBio:383344
Bgee:Q6GQU6 Genevestigator:Q6GQU6 Uniprot:Q6GQU6
Length = 589
Score = 246 (91.7 bits), Expect = 1.7e-17, P = 1.7e-17
Identities = 82/305 (26%), Positives = 137/305 (44%)
Query: 61 LKTLHNEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
+ L ++ FQK+ GL +L+ + + + + RGL NL L +H + VP+
Sbjct: 209 IAALEDQNFQKLPGLSHLE--IDNWPLLEEVAPGSLRGL-NLTSLSITHTNITAVPAAAL 265
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L LS NPI + G+F+ L L L L+ + VIE AFVGL + L L
Sbjct: 266 RQQAHLTCLNLSHNPISMVPRGSFRDLVRLRELHLAGALLAVIEPQAFVGLRQIRLLNLS 325
Query: 180 NNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAID---PICSVP 235
+N ++T+ + L + + NP CDC L+ W+ + + D P C+ P
Sbjct: 326 DNLLSTLEENTFHSVNTLETLRVDGNPLACDCRLL----WIVQRRKTLNFDGRLPACATP 381
Query: 236 PRLSSVTIKQL--SI--DELAC-EPQITPSTF-YLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ + L S+ + C +P+I ++ EG +V LC+ P + W+
Sbjct: 382 AEVRGDALHNLPDSVLFEYFVCRKPKIRERRLQHVTATEGDDVRFLCRAEGEPAPTVAWV 441
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSN 349
P Q+ S++A+ GT L I ++ D+GT+ CVA N G+ +
Sbjct: 442 ---TP-QHHSVTAASRGRARVLPGGT------LTIADTRPQDSGTYTCVASNAGGNDTYF 491
Query: 350 YTIRI 354
T+ +
Sbjct: 492 ATLTV 496
Score = 169 (64.5 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 54/198 (27%), Positives = 89/198 (44%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+ + + CP C C +TV C + L + EG+ T++L+ + N ++ L+
Sbjct: 13 LLLPTAPLAAGCPARCECS--ASTRTVACGRRRLTAIPEGIPAETRMLELSRNRIRCLNP 70
Query: 67 EKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLM 126
L L+++ L+ I+ ++ AF L L L N L+ +P F SL
Sbjct: 71 GDLAS--LPTLEELDLNHNVIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTHLDSLT 128
Query: 127 KLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
L LS N + + +FQ L L LE+ + I AF GL L L L+ +T++
Sbjct: 129 LLDLSENKLVILLDFSFQDLRSLQRLEVGDNDLVFISRRAFAGLLGLAELTLERCNLTSL 188
Query: 187 SGSNILPT-GLHGIDLHH 203
S ++ GL + L H
Sbjct: 189 SPESLGHLRGLGALRLRH 206
>UNIPROTKB|F1P8A1 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 PROSITE:PS01186 InterPro:IPR003645
InterPro:IPR001791 Pfam:PF00054 SMART:SM00274 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF12661 Pfam:PF01463
GeneTree:ENSGT00700000104083 CTD:9353 KO:K06839 OMA:RHKMFKG
EMBL:AAEX03002614 EMBL:AAEX03002615 EMBL:AAEX03002616
RefSeq:XP_854843.1 ProteinModelPortal:F1P8A1
Ensembl:ENSCAFT00000026343 GeneID:595148 KEGG:cfa:595148
Uniprot:F1P8A1
Length = 1530
Score = 264 (98.0 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 81/239 (33%), Positives = 110/239 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C G TV+C +L +V + NT+ LD GNN+ + F GL +
Sbjct: 27 ACPAQCSCS---GS-TVDCHGLALRSVPRSIPRNTERLDLNGNNITRITKTDFA--GLRH 80
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ + L +IS I+ AF+ L L L + N LQ P F L +L LS N I+
Sbjct: 81 LRVLQLMENKISTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSKLYRLDLSENQIQ 140
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS--NILPT 194
I AF+ + L+L I IED AF L LE L L+NN IT +S + N +P
Sbjct: 141 AIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPK 200
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
L LH N CDC L L WL + + + C P L + ++ E C
Sbjct: 201 -LRTFRLHSNNLYCDCHLAWLSDWLRQ-RPRVGLYTQCMGPSHLRGHNVAEVQKREFVC 257
Score = 182 (69.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 47/178 (26%), Positives = 90/178 (50%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ +V+++ F+ L L ++FS+N + + F + ++ L+ N ++
Sbjct: 537 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLEN 596
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
++ F+ L L TL L I + + +F+GL S+ L L +N+I TI+ G+ L
Sbjct: 597 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSL 656
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ ++I + C+
Sbjct: 657 STLNLLANPFNCNCYLAWLGEWLRK-KRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 713
Score = 172 (65.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 56/189 (29%), Positives = 83/189 (43%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I VI AF L +D S+N + + D F SL L L GN I
Sbjct: 302 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 361
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-G 195
++ F+ L L L L+ I + AF L +L L L +NK+ TI+ P
Sbjct: 362 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 421
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-- 253
+ + L NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 422 IQTMHLAQNPFICDCHLKWLADYLHTNPIETS-GARCTSPRRLANKRIGQIKSKKFRCSA 480
Query: 254 -EPQITPST 261
E P T
Sbjct: 481 KEQYFIPGT 489
Score = 170 (64.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 47/140 (33%), Positives = 68/140 (48%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+S CPT C C V C NK L + +G+ + L GN+ + E +
Sbjct: 724 LSRCPTECTCL----DTVVRCSNKGLKVLPKGIPRDVTELYLDGNHFTLVPKELYNYK-- 777
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L I LS RIS + +++F +T L+ L S+N L+ +P TF SL L+L GN
Sbjct: 778 -HLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 836
Query: 135 IKQIKTGAFQPLSYLVTLEL 154
I + GAF LS L L +
Sbjct: 837 ISVVPEGAFSDLSALSHLAI 856
Score = 138 (53.6 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 50/162 (30%), Positives = 68/162 (41%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C+ G TV+C N+ L + + + T L N L K L
Sbjct: 505 ACPEKCRCE---GT-TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 559
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI S +I+ I+ AF G + ++ + N L+ V F SL L L N I
Sbjct: 560 LRKINFSNNKITDIEEGAFEGAAGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 619
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
+ +F LS + L L I I AF L SL L L
Sbjct: 620 CVGNDSFIGLSSVRLLSLYDNQIATIAPGAFDTLHSLSTLNL 661
Score = 136 (52.9 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 44/164 (26%), Positives = 69/164 (42%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP +C C V+C K L + + + N++K + F L
Sbjct: 273 CPAACTCS----NNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KL 326
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++I LS +IS + AF+GL +L L N + +P F SL L L+ N I
Sbjct: 327 RRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC 386
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ AFQ L L L L ++ I F L +++ + L N
Sbjct: 387 LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 430
Score = 40 (19.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 529 SGSQCQEWGNVCYNRMQPMQH 549
+G C+E + C + P QH
Sbjct: 1029 TGELCEEKLDFCAQDLNPCQH 1049
>UNIPROTKB|F1MLJ7 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090288 "negative regulation of cellular response to
growth factor stimulus" evidence=IEA] [GO:0090260 "negative
regulation of retinal ganglion cell axon guidance" evidence=IEA]
[GO:0090024 "negative regulation of neutrophil chemotaxis"
evidence=IEA] [GO:0071676 "negative regulation of mononuclear cell
migration" evidence=IEA] [GO:0071672 "negative regulation of smooth
muscle cell chemotaxis" evidence=IEA] [GO:0071504 "cellular
response to heparin" evidence=IEA] [GO:0070100 "negative regulation
of chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0060763 "mammary duct terminal end bud growth" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0050929 "induction of negative
chemotaxis" evidence=IEA] [GO:0048846 "axon extension involved in
axon guidance" evidence=IEA] [GO:0048754 "branching morphogenesis
of an epithelial tube" evidence=IEA] [GO:0048495 "Roundabout
binding" evidence=IEA] [GO:0045499 "chemorepellent activity"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0043237 "laminin-1 binding" evidence=IEA] [GO:0043116 "negative
regulation of vascular permeability" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0033563 "dorsal/ventral axon guidance" evidence=IEA]
[GO:0032870 "cellular response to hormone stimulus" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0021972 "corticospinal neuron axon guidance
through spinal cord" evidence=IEA] [GO:0021836 "chemorepulsion
involved in postnatal olfactory bulb interneuron migration"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0010629 "negative regulation of gene expression" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010593 "negative regulation of lamellipodium
assembly" evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005095 "GTPase inhibitor activity" evidence=IEA]
[GO:0002042 "cell migration involved in sprouting angiogenesis"
evidence=IEA] [GO:0001933 "negative regulation of protein
phosphorylation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001656 "metanephros development" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0009986
GO:GO:0030308 GO:GO:0001701 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0008201 GO:GO:0005509
GO:GO:0043116 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0008045 GO:GO:0071504
GO:GO:0005095 GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870
GO:GO:0030837 GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791
Pfam:PF00054 SMART:SM00274 SMART:SM00282 PROSITE:PS00010
PROSITE:PS50025 GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0001656 GO:GO:0010596 GO:GO:0001657
GO:GO:0001933 GO:GO:0048754 GO:GO:0071676 GO:GO:0031290
InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225 SMART:SM00041
GO:GO:0048846 GO:GO:0060763 GO:GO:0070100 GO:GO:0090288
GO:GO:0033563 GO:GO:0045499 GO:GO:0002042 Pfam:PF01463
GO:GO:0010593 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0090260 GO:GO:0021836 GO:GO:0061364 GO:GO:0021972
GO:GO:0050929 GO:GO:0090024 GO:GO:0051058 OMA:RHKMFKG
EMBL:DAAA02017049 IPI:IPI00692425 Ensembl:ENSBTAT00000061059
NextBio:20876291 Uniprot:F1MLJ7
Length = 1532
Score = 264 (98.0 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 83/251 (33%), Positives = 116/251 (46%)
Query: 7 LIATIIKIVS--ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
L+ I+ V+ ACP C C G TV+C +L +V + NT+ LD GNN+ +
Sbjct: 15 LVLAILNEVAPQACPAQCSCS---GS-TVDCHGLALRSVPRNIPRNTERLDLNGNNITRI 70
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F GL +L+ + L +I+ I+ AF+ L L L + N LQ P F
Sbjct: 71 TKTDFA--GLRHLRVLQLMENKITTIERGAFQDLKELERLRLNRNHLQLFPELLFLGTSK 128
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L +L LS N I+ I AF+ + L+L I IED AF L LE L L+NN IT
Sbjct: 129 LYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNHISCIEDGAFRALRDLEVLTLNNNNIT 188
Query: 185 TISGS--NILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVT 242
+S + N +P L LH N CDC L L WL + + + C P L
Sbjct: 189 RLSVASFNHMPK-LRTFRLHSNNLYCDCHLAWLSDWLRQ-RPRVGLYTQCMGPSHLRGHN 246
Query: 243 IKQLSIDELAC 253
+ ++ E C
Sbjct: 247 VAEVQKREFVC 257
Score = 187 (70.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 48/178 (26%), Positives = 91/178 (51%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ +V+++ F+ L L ++FS+N + + F + ++ L+ N ++
Sbjct: 539 ELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLEN 598
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
++ F+ L L TL L I + + +F+GL S+ L L +N+ITTI+ G+ L
Sbjct: 599 VQHKMFKGLESLKTLMLRSNRISCVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSL 658
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ ++I + C+
Sbjct: 659 STLNLLANPFNCNCYLAWLGEWLRK-KRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 715
Score = 172 (65.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 56/189 (29%), Positives = 83/189 (43%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I VI AF L +D S+N + + D F SL L L GN I
Sbjct: 304 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT 363
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-G 195
++ F+ L L L L+ I + AF L +L L L +NK+ TI+ P
Sbjct: 364 ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 423
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-- 253
+ + L NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 424 IQTMHLAQNPFICDCHLKWLADYLHTNPIETS-GARCTSPRRLANKRIGQIKSKKFRCSA 482
Query: 254 -EPQITPST 261
E P T
Sbjct: 483 KEQYFIPGT 491
Score = 158 (60.7 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 45/140 (32%), Positives = 66/140 (47%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+S CP C C V C NK+L + +G+ + L GN + E
Sbjct: 726 LSRCPAECTCL----DTVVRCSNKALKVLPKGIPRDVTELYLDGNQFTLVPKEL---SNY 778
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L I LS RIS + +++F +T L+ L S+N L+ +P TF SL L+L GN
Sbjct: 779 KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGND 838
Query: 135 IKQIKTGAFQPLSYLVTLEL 154
I + GAF L+ L L +
Sbjct: 839 ISVVPEGAFNDLAALSHLAI 858
Score = 139 (54.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 50/162 (30%), Positives = 69/162 (42%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C+ G TV+C N+ L + + + T L N L K L
Sbjct: 507 ACPEKCRCE---GT-TVDCSNQKLTKIPDHIPQYTAELRLNNNEFTVLEATGIFKK-LPQ 561
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI S +I+ I+ AF G + + ++ + N L+ V F SL L L N I
Sbjct: 562 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIS 621
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
+ +F LS + L L I I AF L SL L L
Sbjct: 622 CVGNDSFIGLSSVRLLSLYDNQITTIAPGAFDTLHSLSTLNL 663
Score = 136 (52.9 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 44/164 (26%), Positives = 69/164 (42%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP +C C V+C K L + + + N++K + F L
Sbjct: 275 CPAACTCS----NNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KL 328
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++I LS +IS + AF+GL +L L N + +P F SL L L+ N I
Sbjct: 329 RRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINC 388
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ AFQ L L L L ++ I F L +++ + L N
Sbjct: 389 LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQN 432
Score = 40 (19.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 529 SGSQCQEWGNVCYNRMQPMQH 549
+G C+E + C + P QH
Sbjct: 1031 TGELCEEKLDFCAQDLNPCQH 1051
>UNIPROTKB|B3KTY4 [details] [associations]
symbol:SLITRK2 "cDNA FLJ38959 fis, clone NT2RI2000167,
highly similar to SLIT and NTRK-like protein 2" species:9606 "Homo
sapiens" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL109653 IPI:IPI00410358
RefSeq:NP_001137478.1 RefSeq:NP_001137480.1 RefSeq:NP_001137481.1
RefSeq:NP_001137482.1 RefSeq:NP_115928.1 UniGene:Hs.320368
GeneID:84631 KEGG:hsa:84631 CTD:84631 HGNC:HGNC:13449
PharmGKB:PA134968225 ChiTaRS:SLITRK2 GenomeRNAi:84631 NextBio:74551
OrthoDB:EOG4GTKC9 EMBL:AK096278 EMBL:CH471175 SMR:B3KTY4
STRING:B3KTY4 Ensembl:ENST00000335565 Uniprot:B3KTY4
Length = 724
Score = 247 (92.0 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 82/291 (28%), Positives = 132/291 (45%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGN 59
I + T + CP+SC+C + V C + T + + P + + L TGN
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKF-TNISDLQPKPTSPKKLYLTGN 385
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+T++ + ++L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 386 YLQTVYKNDLLEYSSLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMF 443
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
SL L L N IK+IK F L L L L+ + + D F G +L L L
Sbjct: 444 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLR 502
Query: 180 NNKITTISGSNIL---PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
NN + + +L P + IDL NPW C C ++GL+ W E +P+ I+ + C P
Sbjct: 503 NNHFSHLPVKGVLDQLPAFIQ-IDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESP 561
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNV--SLLCKVSAIPE 283
+ + +K L + + + P ++ T L + + SL S+ PE
Sbjct: 562 AKHAGEILKFLGREAICPDSPNLSDGTV-LSMNHNTDTPRSLSVSPSSYPE 611
Score = 222 (83.2 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 70/238 (29%), Positives = 106/238 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C C+C+ K + C NK TV P ++ L GN L L+ +F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
N ++L + I + AF GL L L ++N L+ + DTF SL L N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYI 146
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT- 194
I+ GAF L+ L L L+ + + F + L L L N++ + + +L
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 195 -GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
G+ I L NPW C C L+ L+ WL+ T T + +C P RL + QL+ +L
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Score = 37 (18.1 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 585 PTHFPALVPATAYYRTLPHRRHTAANPNNRYSREAE 620
PT PAL P A + P + P S++ +
Sbjct: 287 PTMNPALNPTRAPKASRPPKMRNRPTPRVTVSKDRQ 322
>UNIPROTKB|F1RP63 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:CU466998 RefSeq:XP_003482968.1
Ensembl:ENSSSCT00000010401 GeneID:100153917 KEGG:ssc:100153917
Uniprot:F1RP63
Length = 842
Score = 248 (92.4 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 76/258 (29%), Positives = 117/258 (45%)
Query: 18 CPTSCICK-WKGGKQTVECVNKSLITVVEGMDP--NTQVLDYTGNNLKTLHNEKFQKMGL 74
CP C CK + C +++ ++ + P N + L GN + TL K+
Sbjct: 331 CPIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLILAGNIIHTLM--KYDLAEY 388
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
L+ ++L RI V++ +F LT L L + N L + F +L L L N
Sbjct: 389 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNG 448
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
+K+I G F P+ L L L+ ++V+ F G+ L + L N+ T + SNIL
Sbjct: 449 VKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDD 507
Query: 195 G--LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDEL 251
L IDL NPW C C L+GL++W++ + D I C+ P L +K L+ EL
Sbjct: 508 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNIVTDEILCTSPEHLDKKELKALN-SEL 566
Query: 252 AC-----EPQITPSTFYL 264
C P + T Y+
Sbjct: 567 LCPGLVNNPSLPTQTSYV 584
Score = 231 (86.4 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 81/275 (29%), Positives = 123/275 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGL 74
+C + C C+ K G + C K + + + P ++ L N L LH F GL
Sbjct: 32 SCDSLCNCEEKDGTMLINCEEKDIKKLSQISVPASRPFHLSLLNNGLTMLHANDFS--GL 89
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N I+L I+ I++ AF GL L L +HN L+ + DTF +L L N
Sbjct: 90 TNAISIHLGFNNIADIETGAFNGLGLLKKLHINHNSLEILKEDTFHGLENLEFLQADNNF 149
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
I I+ AF L+ L L L+ IE + F + L L L N++ T+ L
Sbjct: 150 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNVFRFVP-LTHLDLRGNQLQTLPYVGFLEH 208
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
G + + L N W C+C L+ L+ WLE+ I D +C+ PP + +L + +
Sbjct: 209 IGRILDLQLEDNKWACNCDLLQLKLWLENMPPQTVIGDVVCNSPPFFKGSILSRLKKESI 268
Query: 252 ACEPQITPSTFYLEIQEGKNVSL-LCKVSAIPEAK 285
C P TP + E E + SL L S+I + +
Sbjct: 269 -C-P--TPPVY--EEHEDPSGSLHLAVTSSISDGR 297
>UNIPROTKB|Q9H156 [details] [associations]
symbol:SLITRK2 "SLIT and NTRK-like protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:Y19205 EMBL:AY358828 EMBL:AK091015
EMBL:AK289732 EMBL:AL109653 EMBL:BC113011 EMBL:BC113012
EMBL:AB058757 IPI:IPI00176104 IPI:IPI00410358 RefSeq:NP_001137475.1
RefSeq:NP_001137476.1 RefSeq:NP_001137477.1 RefSeq:NP_001137478.1
RefSeq:NP_001137480.1 RefSeq:NP_001137481.1 RefSeq:NP_001137482.1
RefSeq:NP_115928.1 UniGene:Hs.320368 ProteinModelPortal:Q9H156
SMR:Q9H156 STRING:Q9H156 PhosphoSite:Q9H156 DMDM:46397026
PaxDb:Q9H156 PRIDE:Q9H156 Ensembl:ENST00000370490
Ensembl:ENST00000413937 Ensembl:ENST00000428560
Ensembl:ENST00000434188 Ensembl:ENST00000447897 GeneID:84631
KEGG:hsa:84631 UCSC:uc004fcd.3 CTD:84631 GeneCards:GC0XP144900
H-InvDB:HIX0017096 H-InvDB:HIX0176721 HGNC:HGNC:13449 HPA:HPA051847
MIM:300561 neXtProt:NX_Q9H156 PharmGKB:PA134968225 eggNOG:NOG147171
InParanoid:Q9H156 OMA:LQADYNY PhylomeDB:Q9H156 ChiTaRS:SLITRK2
GenomeRNAi:84631 NextBio:74551 ArrayExpress:Q9H156 Bgee:Q9H156
CleanEx:HS_SLITRK2 Genevestigator:Q9H156 GermOnline:ENSG00000185985
Uniprot:Q9H156
Length = 845
Score = 247 (92.0 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 82/291 (28%), Positives = 132/291 (45%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGN 59
I + T + CP+SC+C + V C + T + + P + + L TGN
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKF-TNISDLQPKPTSPKKLYLTGN 385
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+T++ + ++L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 386 YLQTVYKNDLLEYSSLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPSMF 443
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
SL L L N IK+IK F L L L L+ + + D F G +L L L
Sbjct: 444 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLR 502
Query: 180 NNKITTISGSNIL---PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
NN + + +L P + IDL NPW C C ++GL+ W E +P+ I+ + C P
Sbjct: 503 NNHFSHLPVKGVLDQLPAFIQ-IDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESP 561
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNV--SLLCKVSAIPE 283
+ + +K L + + + P ++ T L + + SL S+ PE
Sbjct: 562 AKHAGEILKFLGREAICPDSPNLSDGTV-LSMNHNTDTPRSLSVSPSSYPE 611
Score = 222 (83.2 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 70/238 (29%), Positives = 106/238 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C C+C+ K + C NK TV P ++ L GN L L+ +F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
N ++L + I + AF GL L L ++N L+ + DTF SL L N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEILREDTFLGLESLEYLQADYNYI 146
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT- 194
I+ GAF L+ L L L+ + + F + L L L N++ + + +L
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKVMPFAGVLEHI 205
Query: 195 -GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
G+ I L NPW C C L+ L+ WL+ T T + +C P RL + QL+ +L
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCETPFRLHGKDVTQLTRQDL 262
Score = 37 (18.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 585 PTHFPALVPATAYYRTLPHRRHTAANPNNRYSREAE 620
PT PAL P A + P + P S++ +
Sbjct: 287 PTMNPALNPTRAPKASRPPKMRNRPTPRVTVSKDRQ 322
>RGD|1303079 [details] [associations]
symbol:Amigo1 "adhesion molecule with Ig like domain 1"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005887 "integral to plasma membrane"
evidence=NAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0007156
"homophilic cell adhesion" evidence=IPI] [GO:0007157 "heterophilic
cell-cell adhesion" evidence=IPI] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0007413 "axonal fasciculation" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IDA] [GO:0030424 "axon"
evidence=IEA] [GO:0042552 "myelination" evidence=IEP] [GO:0050772
"positive regulation of axonogenesis" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1303079 GO:GO:0005887 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0030424 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0042552 GO:GO:0050772 GO:GO:0007157 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57463
eggNOG:NOG146733 HOGENOM:HOG000231327 HOVERGEN:HBG080231
OrthoDB:EOG4TB4BP GO:GO:0007413 GO:GO:0007156 EMBL:AY237729
IPI:IPI00201253 RefSeq:NP_996764.1 UniGene:Rn.116338
ProteinModelPortal:Q80ZD7 STRING:Q80ZD7 GeneID:295365
KEGG:rno:295365 UCSC:RGD:1303079 InParanoid:Q80ZD7 NextBio:639469
ArrayExpress:Q80ZD7 Genevestigator:Q80ZD7 Uniprot:Q80ZD7
Length = 493
Score = 242 (90.2 bits), Expect = 3.0e-17, P = 3.0e-17
Identities = 100/368 (27%), Positives = 162/368 (44%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+F +A + V +CP +C+C + C + L V + + T +LD + NNL L
Sbjct: 21 LFEVARAGRPVVSCPANCLC----ASNILSCSKQQLPNVPQSLPGYTALLDLSHNNLSRL 76
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
E + L NL + LS ++ I S+AF + NL LD S N L T+ F +
Sbjct: 77 KAE-WTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSGLQA 135
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELS-----KCGIEVIEDAAFVGLDSLEWLKLD 179
L L L N I + AF+ ++ L L LS + +E+I+DA L L L L
Sbjct: 136 LEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNMISRFPLELIKDAN--RLPKLTLLDLS 193
Query: 180 NNKITTISGSNI--LPTGL-HGIDLHHNPWTCDCLLIGL-RRWLE---STKTPMAIDPIC 232
+NK+ + +++ LP + +G+ LH+NP CDC L L W S+ D C
Sbjct: 194 SNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSHWQYRQLSSVMDFQEDLYC 253
Query: 233 SVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDG 292
+L +V S+D C + S + E G +++ C K+ W+
Sbjct: 254 VHSKKLHNV----FSLDFFNCS-EYKESAW--EAHLGDTLTITCDTKQQGMTKV-WV--- 302
Query: 293 VPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
P + ++ + V +E+G + E+ ++D G + C A G T N T+
Sbjct: 303 TPSNEQVLNQGANGTVTVSEDGN-LHFKEV-----QVEDGGVYTCYA---MGETF-NETL 352
Query: 353 RIVLKEEN 360
+ LK N
Sbjct: 353 SVELKVYN 360
>UNIPROTKB|F1RQ61 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:FP236785 RefSeq:XP_003135487.1
Ensembl:ENSSSCT00000013911 Ensembl:ENSSSCT00000034054
Ensembl:ENSSSCT00000034972 Ensembl:ENSSSCT00000035609
GeneID:100511615 KEGG:ssc:100511615 Uniprot:F1RQ61
Length = 849
Score = 246 (91.7 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 82/291 (28%), Positives = 132/291 (45%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGN 59
I + T + CP+SC+C + V C + T + + P + + L TGN
Sbjct: 331 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKF-TNISDLQPKPTSPKKLYLTGN 389
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+T++ + ++L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 390 YLQTVYKNDLLEYSSLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLYPAMF 447
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
SL L L N IK+IK F L L L L+ + + D F G +L L L
Sbjct: 448 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLR 506
Query: 180 NNKITTISGSNIL---PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
NN + + +L P + IDL NPW C C ++GL+ W E +P+ I+ + C P
Sbjct: 507 NNHFSHLPVKGVLDQLPAFIQ-IDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESP 565
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNV--SLLCKVSAIPE 283
+ + +K L + + + P ++ T L + + SL S+ PE
Sbjct: 566 AKHAGEILKFLGREAICPDSPNLSDGTI-LSMNHNTDTPRSLSVSPSSYPE 615
Score = 224 (83.9 bits), Expect = 8.6e-15, P = 8.6e-15
Identities = 74/257 (28%), Positives = 114/257 (44%)
Query: 5 IFLIATIIKIVSA------CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDY 56
+F +A I++ S C C+C+ K + C NK TV P ++ L
Sbjct: 10 VFTVAGILQTESRKTAKDICKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFL 69
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
GN L L+ +F + N ++L + I + AF GL L L ++N L+ +
Sbjct: 70 NGNLLTRLYPNEF--VNYSNAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLRE 127
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
DTF SL L N I I+ GAF L+ L L L+ + + F + L L
Sbjct: 128 DTFLGLESLEYLQADYNYISAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHL 186
Query: 177 KLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSV 234
L N++ + + +L G+ I L NPW C C L+ L+ WL+ T T + +C
Sbjct: 187 DLRGNRLKVMPFAGVLEHIGGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCET 245
Query: 235 PPRLSSVTIKQLSIDEL 251
P RL + QL+ +L
Sbjct: 246 PFRLHGKDVTQLTRQDL 262
>UNIPROTKB|F1MUR6 [details] [associations]
symbol:RTN4RL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0004872
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 OMA:WFREARV EMBL:DAAA02041755
EMBL:DAAA02041756 IPI:IPI00691427 Ensembl:ENSBTAT00000016755
Uniprot:F1MUR6
Length = 417
Score = 239 (89.2 bits), Expect = 3.6e-17, P = 3.6e-17
Identities = 72/231 (31%), Positives = 110/231 (47%)
Query: 32 TVECVNKSLITVVEGMDPNTQVLDYT--GNN--LKTLHNEKFQKMGLVNLQKIYLSRCRI 87
T+ + +L + G + Q L+ G+N L++L + FQ GL LQ ++L RC++
Sbjct: 83 TLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQ--GLERLQSLHLYRCQL 140
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
S + FRGL +L L N L + D F D +L L L GN ++ + F+ L
Sbjct: 141 SSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRLRLLTEHVFRGLG 200
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNP 205
L L L ++ + AAF GL L L L NN + ++ G + LP+ L + L+ NP
Sbjct: 201 SLDRLLLHGNRLQGVHRAAFRGLGRLTILYLFNNSLASLPGEALADLPS-LEFLRLNANP 259
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL-SIDELACEP 255
W CDC L W + + + D C+ PP ++ L D AC P
Sbjct: 260 WACDCRARPLWAWFQRARVSSS-DVTCASPPERRGRDLRALREADFQACPP 309
Score = 120 (47.3 bits), Expect = 0.00057, P = 0.00057
Identities = 52/204 (25%), Positives = 81/204 (39%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+ + CP C C TV C + V + P TQ L N + L
Sbjct: 15 LLLLLAAAPAAARCPMLCTCY--PAPPTVSCQANNFSAVPRALPPGTQRLFLQNNLIGAL 72
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYP 123
F +L ++L +S I FR L L +LD N L+++ DTF
Sbjct: 73 RPGSFGP----SLLTLWLFSNNLSAIYPGTFRHLQALEELDLGDNRHLRSLEPDTFQGLE 128
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + + F+ L L L L + + ++D F L +L L L N++
Sbjct: 129 RLQSLHLYRCQLSSLPGTIFRGLVSLQYLYLQENSLVHLQDDLFADLANLSHLFLHGNRL 188
Query: 184 TTISGSNILPTGLHGID---LHHN 204
++ ++ GL +D LH N
Sbjct: 189 RLLT-EHVF-RGLGSLDRLLLHGN 210
>UNIPROTKB|F1NHG5 [details] [associations]
symbol:SLIT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005509 "calcium ion binding" evidence=IEA] [GO:0001656
"metanephros development" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001933 "negative regulation of
protein phosphorylation" evidence=IEA] [GO:0002042 "cell migration
involved in sprouting angiogenesis" evidence=IEA] [GO:0005095
"GTPase inhibitor activity" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0008201 "heparin binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0010593
"negative regulation of lamellipodium assembly" evidence=IEA]
[GO:0010596 "negative regulation of endothelial cell migration"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0021836 "chemorepulsion involved in postnatal olfactory bulb
interneuron migration" evidence=IEA] [GO:0021972 "corticospinal
neuron axon guidance through spinal cord" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0030837
"negative regulation of actin filament polymerization"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043116 "negative regulation of vascular
permeability" evidence=IEA] [GO:0043237 "laminin-1 binding"
evidence=IEA] [GO:0043394 "proteoglycan binding" evidence=IEA]
[GO:0045499 "chemorepellent activity" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0048846
"axon extension involved in axon guidance" evidence=IEA]
[GO:0050929 "induction of negative chemotaxis" evidence=IEA]
[GO:0051058 "negative regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0051414 "response to cortisol
stimulus" evidence=IEA] [GO:0060763 "mammary duct terminal end bud
growth" evidence=IEA] [GO:0061364 "apoptotic process involved in
luteolysis" evidence=IEA] [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0071504
"cellular response to heparin" evidence=IEA] [GO:0071672 "negative
regulation of smooth muscle cell chemotaxis" evidence=IEA]
[GO:0071676 "negative regulation of mononuclear cell migration"
evidence=IEA] [GO:0090024 "negative regulation of neutrophil
chemotaxis" evidence=IEA] [GO:0090260 "negative regulation of
retinal ganglion cell axon guidance" evidence=IEA] [GO:0090288
"negative regulation of cellular response to growth factor
stimulus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0005737
GO:GO:0008285 GO:GO:0005615 GO:GO:0009986 GO:GO:0030308
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0008201 GO:GO:0005509 InterPro:IPR013032 PROSITE:PS00022
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0043065 GO:GO:0071504 GO:GO:0005095
GO:GO:0016337 PROSITE:PS01186 GO:GO:0032870 GO:GO:0030837
GO:GO:0010629 InterPro:IPR003645 InterPro:IPR001791 Pfam:PF00054
SMART:SM00274 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
GO:GO:0071672 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 GO:GO:0010596 GO:GO:0001933
GO:GO:0071676 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 GO:GO:0070100 GO:GO:0090288 GO:GO:0045499
Pfam:PF01463 GO:GO:0010593 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050929 GO:GO:0090024
GO:GO:0051058 OMA:RHKMFKG EMBL:AADN02015249 EMBL:AADN02015250
EMBL:AADN02015251 EMBL:AADN02015252 EMBL:AADN02015253
EMBL:AADN02015254 EMBL:AADN02015255 EMBL:AADN02015256
EMBL:AADN02015257 EMBL:AADN02015258 EMBL:AADN02015259
EMBL:AADN02015260 EMBL:AADN02015261 EMBL:AADN02015262
EMBL:AADN02015263 EMBL:AADN02015264 EMBL:AADN02015265
EMBL:AADN02015266 EMBL:AADN02015267 EMBL:AADN02015268
EMBL:AADN02015269 EMBL:AADN02015270 EMBL:AADN02015271
IPI:IPI00883181 Ensembl:ENSGALT00000023294 ArrayExpress:F1NHG5
Uniprot:F1NHG5
Length = 1525
Score = 259 (96.2 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 80/238 (33%), Positives = 109/238 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C G TV+C +L V + NT+ LD GNN+ + F GL +L
Sbjct: 24 CPAQCSCS---GS-TVDCHGLALRGVPRNIPRNTERLDLNGNNITRITKTDFA--GLRHL 77
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ + L +IS I+ AF+ L L L + N LQ + F P L +L LS N I+
Sbjct: 78 RVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSELLFLGTPKLYRLDLSENQIQA 137
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS--NILPTG 195
I AF+ + L+L I IED AF L LE L L+NN IT +S + N +P
Sbjct: 138 IPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLTLNNNNITRLSVASFNHMPK- 196
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
L LH N CDC L L WL + + + C P L + ++ E C
Sbjct: 197 LRTFRLHSNNLYCDCHLAWLSDWLRQ-RPRVGLYTQCMGPAHLRGHNVAEVQKREFVC 253
Score = 181 (68.8 bits), Expect = 9.1e-09, Sum P(2) = 9.1e-09
Identities = 48/178 (26%), Positives = 89/178 (50%)
Query: 79 KIYLSRCRISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ L+ SV+++ F+ L L ++ S+N + + F + +L L+ N ++
Sbjct: 533 ELRLNNNEFSVLEATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLET 592
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGL 196
++ F+ L L TL L + + + +F GL S+ L L +N+ITT++ GS L
Sbjct: 593 VRDKMFKGLESLKTLMLRSNRVSCVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSL 652
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
++L NP+ C+C L L WL K + +P C P L + I+ ++I + C+
Sbjct: 653 STLNLLANPFNCNCHLAWLGDWLRK-KRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCD 709
Score = 178 (67.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 57/189 (30%), Positives = 83/189 (43%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
+ +I L + I VI AF L +D S+N + D F SL L L GN I
Sbjct: 298 ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT 357
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-G 195
++ G F+ L L L L+ I + AF L +L L L +NK+ TI+ P
Sbjct: 358 ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA 417
Query: 196 LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-- 253
+ + L NP+ CDC L L +L + + C+ P RL++ I Q+ + C
Sbjct: 418 IQTLHLAQNPFICDCHLKWLADYLHTNPIETS-GARCTSPRRLANKRIGQIKSKKFRCSA 476
Query: 254 -EPQITPST 261
E P T
Sbjct: 477 KEQYFIPGT 485
Score = 163 (62.4 bits), Expect = 7.4e-07, Sum P(2) = 7.4e-07
Identities = 46/140 (32%), Positives = 66/140 (47%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+S CP C C V C NK L + +G+ + L GN + E
Sbjct: 720 LSRCPAECTCL----DTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKEL---SNY 772
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L I LS RIS + +++F +T L+ L S+N L+ +P+ TF SL L+L GN
Sbjct: 773 KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGND 832
Query: 135 IKQIKTGAFQPLSYLVTLEL 154
I + GAF LS L L +
Sbjct: 833 ISVVPEGAFNDLSALSHLAI 852
Score = 144 (55.7 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 50/162 (30%), Positives = 71/162 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C+ G TV+C N+ L + + + T L N L K L
Sbjct: 501 ACPEKCRCE--G--TTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLEATGIFKK-LPQ 555
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI LS +I+ I+ AF G + + +L + N L+TV F SL L L N +
Sbjct: 556 LRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLETVRDKMFKGLESLKTLMLRSNRVS 615
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
+ +F LS + L L I + +F L SL L L
Sbjct: 616 CVGNDSFTGLSSVRLLSLYDNQITTVAPGSFDTLHSLSTLNL 657
Score = 134 (52.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 45/164 (27%), Positives = 68/164 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP +C C V+C K L + + + N++K + F L
Sbjct: 269 CPAACTCS----NNIVDCRGKGLTEIPTNLPETITEIRLEQNSIKVIPPGAFSPYK--KL 322
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++I LS +IS AF+GL +L L N + +P F SL L L+ N I
Sbjct: 323 RRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKITELPKGLFEGLFSLQLLLLNANKINC 382
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ AFQ L L L L ++ I F L +++ L L N
Sbjct: 383 LRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTLHLAQN 426
Score = 42 (19.8 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 529 SGSQCQEWGNVCYNRMQPMQH 549
+G C+E + C + P QH
Sbjct: 1025 TGELCEEKLDFCAQNLNPCQH 1045
>UNIPROTKB|Q6UXK5 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 CleanEx:HS_LRRN1 CTD:57633 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE OrthoDB:EOG4XKV6G EMBL:AB074161
EMBL:AB040930 EMBL:AY358312 EMBL:BC034947 EMBL:AK023273
IPI:IPI00021485 RefSeq:NP_065924.3 UniGene:Hs.163244
ProteinModelPortal:Q6UXK5 SMR:Q6UXK5 STRING:Q6UXK5
PhosphoSite:Q6UXK5 DMDM:60390188 PaxDb:Q6UXK5 PRIDE:Q6UXK5
DNASU:57633 Ensembl:ENST00000319331 GeneID:57633 KEGG:hsa:57633
UCSC:uc003bpt.4 GeneCards:GC03P003816 HGNC:HGNC:20980 HPA:HPA011071
neXtProt:NX_Q6UXK5 PharmGKB:PA134935557 InParanoid:Q6UXK5
GenomeRNAi:57633 NextBio:64341 Bgee:Q6UXK5 Genevestigator:Q6UXK5
GermOnline:ENSG00000175928 Uniprot:Q6UXK5
Length = 716
Score = 249 (92.7 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 81/295 (27%), Positives = 138/295 (46%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL +L+ + ++ + A + + NL LD + N + + F + L +L ++
Sbjct: 236 VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 132 G-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGS 189
+ + A L L LE + + I AF + +LE L L+NN + I
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAIYQK 355
Query: 190 NI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPI---CSVPPRLSSVTI 243
+ LP L I +H NP CDC++ W+ S KT + ++P+ C++PP +
Sbjct: 356 TVESLPN-LREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYKGHQV 410
Query: 244 KQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
K++ I + + C P I+ +F L + G V L C+ A PE +I W+ PI N+
Sbjct: 411 KEVLIQDSSEQCLPMISHDSFPNRLNVDIGTTVFLDCRAMAEPEPEIYWV---TPIGNKI 467
Query: 300 MSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ S + EGT L I N I+D+G + CVA+N G+ + TI++
Sbjct: 468 TVETLSDKYKLSSEGT------LEISNIQIEDSGRYTCVAQNVQGADTRVATIKV 516
Score = 178 (67.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 48/133 (36%), Positives = 72/133 (54%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L NLQ++Y++ +IS I + AF GL NL+ L + N L+ + S F P+L L + N
Sbjct: 142 LSNLQELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGEN 201
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
P+ I F+PL+ L +L L+ + I A VGLDSLE L +NK+ + +
Sbjct: 202 PVIGILDMNFKPLANLRSLVLAGMYLTDIPGNALVGLDSLESLSFYDNKLVKVPQLALQK 261
Query: 194 T-GLHGIDLHHNP 205
L +DL+ NP
Sbjct: 262 VPNLKFLDLNKNP 274
Score = 149 (57.5 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 51/188 (27%), Positives = 82/188 (43%)
Query: 16 SACPTSCICK---WKGGKQT------VECVNKSLITVVEGMDPNTQVLDYTGNNL-KTLH 65
S CP C+C+ W + T V+C + L + + +TQVL NN+ KT+
Sbjct: 30 SECPQLCVCEIRPWFTPQSTYREATTVDCNDLRLTRIPSNLSSDTQVLLLQSNNIAKTV- 88
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
++ Q+ L NL ++ S+ + I LT L L N + + D +L
Sbjct: 89 -DELQQ--LFNLTELDFSQNNFTNIKEVGLANLTQLTTLHLEENQITEMTDYCLQDLSNL 145
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
+L ++ N I I AF L L+ L L+ ++VI+ F +LE L + N +
Sbjct: 146 QELYINHNQISTISAHAFAGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIG 205
Query: 186 ISGSNILP 193
I N P
Sbjct: 206 ILDMNFKP 213
Score = 43 (20.2 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 487 EQNPDLVNDAESVDKDRRAQGGEDTQDTQDKASEA 521
E P L+N E D ++ G DT+ TQ S +
Sbjct: 679 ELYPPLINLWEG-DSEKDKDGSADTKPTQVDTSRS 712
>UNIPROTKB|A0N0X6 [details] [associations]
symbol:LRRN1 "Leucine-rich repeat neuronal protein 1"
species:9913 "Bos taurus" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
EMBL:EF093509 IPI:IPI00699748 RefSeq:NP_001074207.1
UniGene:Bt.17579 ProteinModelPortal:A0N0X6 PRIDE:A0N0X6
Ensembl:ENSBTAT00000001560 GeneID:539619 KEGG:bta:539619 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 InParanoid:A0N0X6 OMA:GINNMGE OrthoDB:EOG4XKV6G
BioCyc:CATTLE:539619-MONOMER NextBio:20878110 Uniprot:A0N0X6
Length = 716
Score = 244 (91.0 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 79/296 (26%), Positives = 139/296 (46%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL +L+ + ++ + A + + NL LD + N + + F + L +L ++
Sbjct: 236 VGLDSLESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGIN 295
Query: 132 G-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDNNKITTISGS 189
+ + A L L LE + + I AF + +LE L L+NN + +
Sbjct: 296 NMGELVSVDRYALDNLPELTKLEATNNPKLSYIHRLAFRSVPALESLMLNNNALNAVYQK 355
Query: 190 NI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPI---CSVPPRLSSVTI 243
+ LP L I +H NP CDC++ W+ S KT + ++P+ C++PP +
Sbjct: 356 TVESLPN-LREISIHSNPLRCDCVI----HWINSNKTNIRFMEPLSMFCAMPPEYRGQQV 410
Query: 244 KQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
K++ I + + C P I+ TF +L + G V L C+ A PE +I W+ P+ N+
Sbjct: 411 KEVLIQDSSEQCLPMISHDTFPNHLNMDIGTTVFLDCRAMAEPEPEIYWV---TPLGNKI 467
Query: 300 MSASESHAVYSTEEGT-EIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ S + EGT EI K + I+D+G + CVA+N G+ + I++
Sbjct: 468 TVETLSEKYKLSSEGTLEISKIQ-------IEDSGRYTCVAQNVEGADTRVVMIKV 516
Score = 183 (69.5 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 56/154 (36%), Positives = 81/154 (52%)
Query: 61 LKTLHNEKFQ--KMG------LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
L TLH E+ Q +M L NLQ++Y++ +IS I + AF GL NL+ L + N L+
Sbjct: 121 LTTLHLEENQITEMNDYCLQDLSNLQELYINHNQISTISANAFSGLKNLLRLHLNSNKLK 180
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ S F P+L L + NP+ I F+PLS L +L L+ + I A VGLDS
Sbjct: 181 VIDSRWFDSTPNLEILMIGENPVIGILDMNFKPLSNLRSLVLAGMYLTDIPGNALVGLDS 240
Query: 173 LEWLKLDNNKITTISGSNILPT-GLHGIDLHHNP 205
LE L +NK+ + + L +DL+ NP
Sbjct: 241 LESLSFYDNKLVKVPQLALQKVPNLKFLDLNKNP 274
Score = 126 (49.4 bits), Expect = 0.00028, P = 0.00028
Identities = 40/154 (25%), Positives = 77/154 (50%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKI---YLSRCRISVIDSKAFRGLTNLVDLDF 106
N LD++ NN + +++GL NL ++ +L +I+ ++ + L+NL +L
Sbjct: 96 NLTELDFSQNNFTNI-----KEVGLANLTQLTTLHLEENQITEMNDYCLQDLSNLQELYI 150
Query: 107 SHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAA 166
+HN + T+ ++ F +L++L L+ N +K I + F L L + + + I D
Sbjct: 151 NHNQISTISANAFSGLKNLLRLHLNSNKLKVIDSRWFDSTPNLEILMIGENPVIGILDMN 210
Query: 167 FVGLDSLEWLKLDNNKITTISGSNILPTGLHGID 200
F L +L L L +T I G+ ++ GL ++
Sbjct: 211 FKPLSNLRSLVLAGMYLTDIPGNALV--GLDSLE 242
>MGI|MGI:2144814 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
MGI:MGI:2144814 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
InterPro:IPR026906 Pfam:PF13306 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:145581
eggNOG:NOG249839 KO:K16358 OMA:NAQCCKA OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 EMBL:AK034245
EMBL:AK048443 EMBL:AK220546 EMBL:BC052038 IPI:IPI00226604
IPI:IPI00227586 RefSeq:NP_848829.2 UniGene:Mm.28802
ProteinModelPortal:Q8BXA0 SMR:Q8BXA0 STRING:Q8BXA0
PhosphoSite:Q8BXA0 PaxDb:Q8BXA0 PRIDE:Q8BXA0
Ensembl:ENSMUST00000055815 Ensembl:ENSMUST00000119481 GeneID:238205
KEGG:mmu:238205 UCSC:uc007nqm.1 UCSC:uc007nqn.1 NextBio:383687
Bgee:Q8BXA0 Genevestigator:Q8BXA0 Uniprot:Q8BXA0
Length = 719
Score = 244 (91.0 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 95/345 (27%), Positives = 156/345 (45%)
Query: 30 KQTVEC-VNKSLITVVEGMD-PN-TQVLDYT--GNNLKTLHNEKFQKMGLVNLQKIYLSR 84
++TVE + + +T ++ D N T ++D T N + + F L NL+ ++L+
Sbjct: 51 RRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFAD--LRNLRALHLNS 108
Query: 85 CRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQ 144
R++ I + F GL+NL L ++N L + S F D +L +L LS N ++ I A +
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVE 168
Query: 145 PLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT------------TISGSNIL 192
+ L TL L I+ I F L + L + +NK+ ++ S I+
Sbjct: 169 KMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGII 228
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
+ NP C+C L+ LRR S + + C+ P L+ + +E
Sbjct: 229 SPSTFALSFGGNPLHCNCELLWLRRL--SREDDLET---CASPALLTGRYFWSIPEEEFL 283
Query: 253 CEPQ-ITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYS 310
CEP IT T + + EG+ +L CK PE I W+ +G I N + S VY
Sbjct: 284 CEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSL-----VY- 337
Query: 311 TEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ GT ++LI + + D G F C+A N AG + + I+
Sbjct: 338 -DNGT----LDILI--TTVKDTGAFTCIASNPAGEATQTVDLHII 375
Score = 189 (71.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 56/185 (30%), Positives = 83/185 (44%)
Query: 2 MYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNL 61
++++FLI ++ CP C+C+ C K L+ V +D T L N +
Sbjct: 5 LFYLFLIGIAVR-AQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFV 63
Query: 62 KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
+ + F M +L + LSR IS I AF L NL L + N L + +D F
Sbjct: 64 TNIKRKDFANM--TSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSG 121
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+L L L+ N + I + AF + L L+LS +E I A + SL L LD+N
Sbjct: 122 LSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHN 181
Query: 182 KITTI 186
I I
Sbjct: 182 MIDNI 186
>RGD|1309357 [details] [associations]
symbol:Lrfn5 "leucine rich repeat and fibronectin type III
domain containing 5" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 RGD:1309357 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 EMBL:CH473947 CTD:145581 KO:K16358 OrthoDB:EOG4X6C81
InterPro:IPR026879 PANTHER:PTHR24373:SF3 IPI:IPI00367330
RefSeq:NP_001101494.1 UniGene:Rn.224998 ProteinModelPortal:D4A1J9
Ensembl:ENSRNOT00000007520 GeneID:314164 KEGG:rno:314164
NextBio:667230 ArrayExpress:D4A1J9 Uniprot:D4A1J9
Length = 719
Score = 244 (91.0 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 95/345 (27%), Positives = 156/345 (45%)
Query: 30 KQTVEC-VNKSLITVVEGMD-PN-TQVLDYT--GNNLKTLHNEKFQKMGLVNLQKIYLSR 84
++TVE + + +T ++ D N T ++D T N + + F L NL+ ++L+
Sbjct: 51 RRTVELRLADNFVTNIKRKDFANMTSLVDLTLSRNTISFITPHAFAD--LRNLRALHLNS 108
Query: 85 CRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQ 144
R++ I + F GL+NL L ++N L + S F D +L +L LS N ++ I A +
Sbjct: 109 NRLTKITNDMFSGLSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVE 168
Query: 145 PLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT------------TISGSNIL 192
+ L TL L I+ I F L + L + +NK+ ++ S I+
Sbjct: 169 KMVSLHTLSLDHNMIDNIPKGTFSHLHKMTRLDVTSNKLQKLPPDPLFQRAQVLATSGII 228
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
+ NP C+C L+ LRR S + + C+ P L+ + +E
Sbjct: 229 SPSTFALSFGGNPLHCNCELLWLRRL--SREDDLET---CASPALLTGRYFWSIPEEEFL 283
Query: 253 CEPQ-ITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYS 310
CEP IT T + + EG+ +L CK PE I W+ +G I N + S VY
Sbjct: 284 CEPPLITRHTHEMRVLEGQRATLRCKARGDPEPAIHWISPEGKLISNATRSL-----VY- 337
Query: 311 TEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ GT ++LI + + D G F C+A N AG + + I+
Sbjct: 338 -DNGT----LDILI--TTVKDTGAFTCIASNPAGEATQTMDLHII 375
Score = 189 (71.6 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 56/185 (30%), Positives = 83/185 (44%)
Query: 2 MYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNL 61
++++FLI ++ CP C+C+ C K L+ V +D T L N +
Sbjct: 5 LFYLFLIGIAVR-AQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRRTVELRLADNFV 63
Query: 62 KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
+ + F M +L + LSR IS I AF L NL L + N L + +D F
Sbjct: 64 TNIKRKDFANM--TSLVDLTLSRNTISFITPHAFADLRNLRALHLNSNRLTKITNDMFSG 121
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+L L L+ N + I + AF + L L+LS +E I A + SL L LD+N
Sbjct: 122 LSNLHHLILNNNQLTLISSTAFDDVFALEELDLSYNNLETIPWDAVEKMVSLHTLSLDHN 181
Query: 182 KITTI 186
I I
Sbjct: 182 MIDNI 186
>RGD|1588563 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=ISO] REFSEQ:NM_001106947 Ncbi:NP_001100417
Length = 836
Score = 245 (91.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 74/256 (28%), Positives = 121/256 (47%)
Query: 10 TIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTL 64
T + ++ CP C CK +V C K++ ++ E + P N + L GNN+K +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGLSVNCQEKNIQSMSE-LTPKPLNAKKLHVNGNNIKDV 392
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F + ++L ++L +I+ I + F LTNL L + N ++ + + F +
Sbjct: 393 DISDFTEFEGLDL--LHLGSNQITAIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHN 450
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L N IK+I G F L L L L+ ++ + F G L L L NNK
Sbjct: 451 LQYLYLEYNLIKEILAGTFDSLPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFM 509
Query: 185 TISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSV 241
+ S +L L IDL NPW C C L+ L+ WLE + + + C P + +++
Sbjct: 510 YLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKELKCETPVQFANI 569
Query: 242 TIKQLSIDELACEPQI 257
+K L +E+ C P++
Sbjct: 570 ELKSLK-NEILC-PKL 583
Score = 202 (76.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 81/280 (28%), Positives = 122/280 (43%)
Query: 1 MMYWIFLIAT-IIKIVSA--------CPTSCICKWKGGKQTVECVNKSLITVVEGMDP-- 49
M W+FLI + +I +A C C C V C S+ + P
Sbjct: 1 MFLWLFLIVSALISSTNADSDISVEICNV-CSCVSVENVLYVNCEKVSVYRPNQLKPPWS 59
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N L++ N L L+ F + + ++L ++ I+ AF GL+ L L ++N
Sbjct: 60 NFYHLNFQNNFLNILYPNTF--VNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNN 117
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+ + +DTF +L L N IK I+ GAF L L L L+ I + D F
Sbjct: 118 ELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-R 176
Query: 170 LDSLEWLKLDNNKITTISGSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA 227
SL L + N+I + +L G + + L NPW C C L+ L+ WLE+ +
Sbjct: 177 FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIY 236
Query: 228 I-DPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEI 266
I + IC P L +K+ + EL C P T S F + I
Sbjct: 237 IGEAICETPSDLYGRLLKETNKQEL-C-PMGTGSDFDVRI 274
>MGI|MGI:2442509 [details] [associations]
symbol:Slitrk4 "SLIT and NTRK-like family, member 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2442509
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000290667 HOVERGEN:HBG056407
GeneTree:ENSGT00680000099775 CTD:139065 OrthoDB:EOG4VHK5S
EMBL:AB097573 EMBL:AK032263 EMBL:AK039763 EMBL:AK053065
IPI:IPI00396668 RefSeq:NP_848855.2 UniGene:Mm.101707
ProteinModelPortal:Q810B8 SMR:Q810B8 PhosphoSite:Q810B8
PaxDb:Q810B8 PRIDE:Q810B8 Ensembl:ENSMUST00000069926
Ensembl:ENSMUST00000114679 GeneID:245446 KEGG:mmu:245446
InParanoid:Q810B8 ChiTaRS:SLITRK4 NextBio:386707 Bgee:Q810B8
CleanEx:MM_SLITRK4 Genevestigator:Q810B8
GermOnline:ENSMUSG00000046699 Uniprot:Q810B8
Length = 837
Score = 245 (91.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 76/263 (28%), Positives = 124/263 (47%)
Query: 10 TIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTL 64
T + ++ CP C CK +V C K++ ++ E + P N + L GNN+K +
Sbjct: 334 TRVPPLTPCPVPCFCKTHPSDLGLSVNCQEKNIQSMSE-LTPKPLNAKKLHVNGNNIKDV 392
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F + ++L ++L +I++I + F LTNL L + N ++ + + F +
Sbjct: 393 DISDFTEFEGLDL--LHLGSNQITLIKGEVFHNLTNLRRLYLNGNQIERLYPEIFSGLHN 450
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L N IK+I G F + L L L+ ++ + F G L L L NNK
Sbjct: 451 LQYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFM 509
Query: 185 TISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSV 241
+ S +L L IDL NPW C C L+ L+ WLE + + + C P + +++
Sbjct: 510 YLPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKELKCETPVQFANI 569
Query: 242 TIKQLSIDELACEPQIT-PS-TF 262
+K L +E+ C + PS TF
Sbjct: 570 ELKSLK-NEILCPKLLNKPSATF 591
Score = 202 (76.2 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 81/280 (28%), Positives = 122/280 (43%)
Query: 1 MMYWIFLIAT-IIKIVSA--------CPTSCICKWKGGKQTVECVNKSLITVVEGMDP-- 49
M W+FLI + +I +A C C C V C S+ + P
Sbjct: 1 MFLWLFLIVSALISSTNADSDISVEICNV-CSCVSVENVLYVNCEKVSVYRPNQLKPPWS 59
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N L++ N L L+ F + + ++L ++ I+ AF GL+ L L ++N
Sbjct: 60 NFYHLNFQNNFLNILYPNTF--VNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNN 117
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+ + +DTF +L L N IK I+ GAF L L L L+ I + D F
Sbjct: 118 ELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-R 176
Query: 170 LDSLEWLKLDNNKITTISGSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA 227
SL L + N+I + +L G + + L NPW C C L+ L+ WLE+ +
Sbjct: 177 FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIY 236
Query: 228 I-DPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEI 266
I + IC P L +K+ + EL C P T S F + I
Sbjct: 237 IGEAICETPSDLYGRLLKETNKQEL-C-PMGTGSDFDVRI 274
>UNIPROTKB|Q9H5Y7 [details] [associations]
symbol:SLITRK6 "SLIT and NTRK-like protein 6" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 EMBL:CH471093
HOGENOM:HOG000290667 HOVERGEN:HBG056407 EMBL:AK021931 EMBL:AK026427
EMBL:AK292793 EMBL:AL137517 EMBL:BX648640 EMBL:AL162373
EMBL:BC101070 EMBL:BC101071 EMBL:BC101072 EMBL:BC101073
IPI:IPI00176398 PIR:T46279 RefSeq:NP_115605.2 UniGene:Hs.525105
ProteinModelPortal:Q9H5Y7 SMR:Q9H5Y7 STRING:Q9H5Y7
PhosphoSite:Q9H5Y7 DMDM:59803110 PaxDb:Q9H5Y7 PRIDE:Q9H5Y7
DNASU:84189 Ensembl:ENST00000400286 GeneID:84189 KEGG:hsa:84189
UCSC:uc001vll.1 CTD:84189 GeneCards:GC13M086366 HGNC:HGNC:23503
HPA:HPA014491 MIM:609681 neXtProt:NX_Q9H5Y7 PharmGKB:PA134928433
eggNOG:NOG113965 InParanoid:Q9H5Y7 OMA:YFELKAN OrthoDB:EOG4X0MRT
PhylomeDB:Q9H5Y7 GenomeRNAi:84189 NextBio:73578 Bgee:Q9H5Y7
CleanEx:HS_SLITRK6 Genevestigator:Q9H5Y7 GermOnline:ENSG00000184564
Uniprot:Q9H5Y7
Length = 841
Score = 245 (91.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 76/260 (29%), Positives = 120/260 (46%)
Query: 18 CPTSCICK-WKGGKQTVECVNKSLITVVEGMDP--NTQVLDYTGNNLKTLHNEKFQKMGL 74
CP C CK + C +++ ++ + P N + L GN + +L K +
Sbjct: 329 CPIPCNCKVLSPSGLLIHCQERNIESLSDLRPPPQNPRKLILAGNIIHSLM--KSDLVEY 386
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
L+ ++L RI V++ +F LT L L + N L + F +L L L N
Sbjct: 387 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSKGMFLGLHNLEYLYLEYNA 446
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
IK+I G F P+ L L L+ ++V+ F G+ L + L N+ T + SNIL
Sbjct: 447 IKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTKVNLKTNQFTHLPVSNILDD 505
Query: 195 G--LHGIDLHHNPWTCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
L IDL NPW C C L+GL++W++ +K + D +C+ P L +K L+ E+
Sbjct: 506 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDDILCTSPGHLDKKELKALN-SEI 564
Query: 252 AC-----EPQITPSTFYLEI 266
C P + T YL +
Sbjct: 565 LCPGLVNNPSMPTQTSYLMV 584
Score = 239 (89.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 84/278 (30%), Positives = 127/278 (45%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVE-GMDPNTQV-LDYTGNNLKTLHNEKFQKMGL 74
+C + C C+ K G + C K + V E + P+ L N L LH F GL
Sbjct: 30 SCDSLCNCEEKDGTMLINCEAKGIKMVSEISVPPSRPFQLSLLNNGLTMLHTNDFS--GL 87
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N I+L I+ I+ AF GL L L +HN L+ + DTF +L L N
Sbjct: 88 TNAISIHLGFNNIADIEIGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 147
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
I I+ AF L+ L L L+ IE + F + L L L N++ T+ L
Sbjct: 148 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 206
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI--DPICSVPPRLSSVTIKQLSIDE 250
G + + L N W C+C L+ L+ WLE+ P +I D +C+ PP + +L +
Sbjct: 207 IGRILDLQLEDNKWACNCDLLQLKTWLENMP-PQSIIGDVVCNSPPFFKGSILSRLKKES 265
Query: 251 LACEPQITPSTFYLEIQEGKNVSL-LCKVSAIPEAKIT 287
+ C P TP + E E + SL L S+I +++++
Sbjct: 266 I-C-P--TPPVY--EEHEDPSGSLHLAATSSINDSRMS 297
>UNIPROTKB|E1C125 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:AADN02013465 IPI:IPI00592627 RefSeq:XP_420266.3
Ensembl:ENSGALT00000011717 GeneID:422287 KEGG:gga:422287
Uniprot:E1C125
Length = 837
Score = 244 (91.0 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 72/255 (28%), Positives = 120/255 (47%)
Query: 10 TIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLH 65
T + ++ CP C+CK +V C +++ ++ E + P N + L GN +K +
Sbjct: 334 TRVPPLTPCPVPCVCKTHPSDLGLSVNCQERNIESMAELLPKPLNAKKLHVNGNYIKDVD 393
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F + ++L ++L RIS I + FR LTNL L + N ++ + + F +L
Sbjct: 394 TADFTEFEGLDL--LHLGSNRISAIRGEVFRNLTNLRRLYLNGNQIERLSPEMFAGLHNL 451
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L N IK+I G F + L L L+ + + F G L L L NN
Sbjct: 452 QYLYLEYNVIKEILAGTFDLMPNLQLLYLNNNLLRSLPAYIFAGAP-LARLNLRNNHFMY 510
Query: 186 ISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVT 242
+ S +L L IDL NPW C C L+ L+ WLE + + + C P + +++
Sbjct: 511 LPVSGVLDQLKSLTQIDLEGNPWDCTCDLVALKLWLEKLSEGIVVKELKCETPVQFANIE 570
Query: 243 IKQLSIDELACEPQI 257
++ L +E+ C P++
Sbjct: 571 LRSLK-NEILC-PKL 583
Score = 186 (70.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 65/216 (30%), Positives = 99/216 (45%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L++ N L L+ F + + + L ++ I+ AF GL+ L L ++N L+
Sbjct: 64 LNFQNNLLIILYPNTF--LNFTHAVSLQLGNNKLQNIEGGAFLGLSALKQLHLNNNELKI 121
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ +DTF +L L N IK I+ GAF L L L L+ I + D F SL
Sbjct: 122 LRADTFLGIENLEYLQADYNLIKSIERGAFNKLHKLKVLILNDNLISFLPDNIF-RFASL 180
Query: 174 EWLKLDNNKITTISGSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DP 230
L + N+I + +L G + + L NPW C C L+ L+ WLE+ + I +
Sbjct: 181 THLDIRGNRIQKLPYIGVLEHIGRIVELQLEDNPWNCTCDLLPLKAWLENMPYNIYIGEA 240
Query: 231 ICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEI 266
IC P L +K+ + EL C T S F + I
Sbjct: 241 ICETPSDLYGRLLKETNKQEL-CSMG-TGSDFDVRI 274
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 31/114 (27%), Positives = 63/114 (55%)
Query: 75 VNLQKIYLSRC-RISVIDSKAFRG-LTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
V+++ + C +++V + +N L+F +N+L + +TF ++ + L L
Sbjct: 33 VSVENVLYVNCEKVAVYRPNQLKPPWSNFYHLNFQNNLLIILYPNTFLNFTHAVSLQLGN 92
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
N ++ I+ GAF LS L L L+ ++++ F+G+++LE+L+ D N I +I
Sbjct: 93 NKLQNIEGGAFLGLSALKQLHLNNNELKILRADTFLGIENLEYLQADYNLIKSI 146
>UNIPROTKB|F1MSM8 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 GeneTree:ENSGT00680000099859 CTD:84189
OMA:YFELKAN EMBL:DAAA02033778 IPI:IPI00713179 RefSeq:XP_001249506.1
RefSeq:XP_002691956.1 UniGene:Bt.87936 Ensembl:ENSBTAT00000005757
GeneID:781119 KEGG:bta:781119 NextBio:20924630 Uniprot:F1MSM8
Length = 842
Score = 243 (90.6 bits), Expect = 7.3e-17, P = 7.3e-17
Identities = 75/258 (29%), Positives = 119/258 (46%)
Query: 18 CPTSCICK-WKGGKQTVECVNKSLITVVEGMDP--NTQVLDYTGNNLKTLHNEKFQKMGL 74
CP C CK + C +++ ++ + P N + L GN + TL K +
Sbjct: 331 CPIPCNCKVLSPSGLLIHCQERNIESLSDLKPPPQNPRKLILAGNIIHTLL--KSDLVEY 388
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
L+ ++L RI V++ +F LT L L + N L + F +L L L N
Sbjct: 389 FTLEMLHLGNNRIEVLEEGSFMNLTRLQKLYLNGNHLTKLSGGMFLGLHNLEYLYLEYNG 448
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
+K+I G F P+ L L L+ ++V+ F G+ L + L N+ T + SNIL
Sbjct: 449 VKEILPGTFNPMPKLKVLYLNNNLLQVLPPHIFSGVP-LTRINLKTNQFTHLPVSNILDD 507
Query: 195 G--LHGIDLHHNPWTCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
L IDL NPW C C L+GL++W++ +K + + +C+ P L +K L+ EL
Sbjct: 508 LDLLTQIDLEDNPWDCSCDLVGLQQWIQKLSKNTVTDEILCTSPEHLHKKELKALN-SEL 566
Query: 252 AC-----EPQITPSTFYL 264
C P + T Y+
Sbjct: 567 LCPGLVNNPSLPTQTSYI 584
Score = 235 (87.8 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 81/277 (29%), Positives = 125/277 (45%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVE-GMDPNTQV-LDYTGNNLKTLHNEKFQKMGL 74
+C + C C+ K G + C K + + + + P+ L N L LH F GL
Sbjct: 32 SCDSLCNCEEKDGTMLINCEEKGIKKLSQISVPPSRPFHLSLLNNGLTVLHTNDFS--GL 89
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N I+L I+ I++ AF GL L L +HN L+ + DTF +L L N
Sbjct: 90 TNAISIHLGFNNIADIETGAFNGLGLLKQLHINHNSLEILKEDTFHGLENLEFLQADNNF 149
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP- 193
I I+ AF L+ L L L+ IE + F + L L L N++ T+ L
Sbjct: 150 ITVIEPSAFSKLNRLKVLILNDNAIESLPPNIFRFVP-LTHLDLRGNQLQTLPYVGFLEH 208
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDEL 251
G + + L N W C+C L+ L+ WLE+ I D +C+ PP + +L + +
Sbjct: 209 IGRILDLQLEDNKWACNCDLLQLKLWLENMPPQSVIGDVVCNSPPFFKGSILSRLKKESI 268
Query: 252 ACEPQITPSTFYLEIQEGKNVSL-LCKVSAIPEAKIT 287
C P TP + E E + SL L S+I ++ ++
Sbjct: 269 -C-P--TPPVY--EEHEDPSGSLHLAVTSSISDSHMS 299
>RGD|1560026 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4" species:10116
"Rattus norvegicus" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1560026 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054 GO:GO:0045211
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 InterPro:IPR026906
Pfam:PF13306 GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:DQ119102 IPI:IPI00197050 RefSeq:NP_001032413.1
UniGene:Rn.198672 ProteinModelPortal:Q45R42 SMR:Q45R42 PRIDE:Q45R42
Ensembl:ENSRNOT00000010673 GeneID:641521 KEGG:rno:641521
UCSC:RGD:1560026 InParanoid:Q45R42 NextBio:714703
Genevestigator:Q45R42 Uniprot:Q45R42
Length = 652
Score = 241 (89.9 bits), Expect = 7.7e-17, P = 7.7e-17
Identities = 82/313 (26%), Positives = 141/313 (45%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N ++++ + F ++ +L ++ L + + I AF GL NL L+ ++ +P+
Sbjct: 156 NPIESIPSYAFNRVP--SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 213
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
T P L +L +SGN +I+ G+F LS L L + + +IE AF GL SL L
Sbjct: 214 T-P-LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 271
Query: 178 LDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWL-ESTKTPMAIDPICSVP 235
L +N ++++ P L + LHHNPW CDC ++ L WL E T C P
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVP 294
+ + ++ C P I + L I E + L C+ P + + WL
Sbjct: 332 MHMRGRYLVEVDQASFQCSAPFIMDAPRDLNISEDRMAELKCRTP--PMSSVKWLLPNGT 389
Query: 295 IQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ + AS + +GT + S +L+ D G + C+ N AG+++++ + +
Sbjct: 390 VLSH---ASRHPRISVLNDGT-LNFSRVLLI-----DTGVYTCMVTNVAGNSNASAYLNV 440
Query: 355 VLKEENVEVVTVF 367
E N + F
Sbjct: 441 SSAELNTPNFSFF 453
Score = 218 (81.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/205 (31%), Positives = 101/205 (49%)
Query: 4 WIFLIATIIKIVSACPTSC--ICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNL 61
WI L A I SA P +C +C V C + L V +G+ NT+ L+ NN+
Sbjct: 28 WI-LCAAIAAAASAGPQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNI 86
Query: 62 KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
+ + + F+ L +L+ + L R I I+ AF GL +L L+ N L +PS F
Sbjct: 87 QMIQADTFRH--LHHLEVLQLGRNAIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 144
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDN 180
L +L L NPI+ I + AF + L+ L+L + +E I + AF GL +L++L L
Sbjct: 145 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 204
Query: 181 NKITTISGSNILP-TGLHGIDLHHN 204
I + N+ P GL +++ N
Sbjct: 205 CNIKDMP--NLTPLVGLEELEMSGN 227
Score = 130 (50.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L+ +GN+ + F GL +L+K+++ ++S+I+ AF GL +LV+L+ +HN L +
Sbjct: 222 LEMSGNHFPEIRPGSFH--GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 279
Query: 114 VPSDTFPDYPSLMKLTLSGNP 134
+P D F L++L L NP
Sbjct: 280 LPHDLFTPLRYLVELHLHHNP 300
>UNIPROTKB|F1SRC2 [details] [associations]
symbol:CHADL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:ICDNSRR GeneTree:ENSGT00700000104286
EMBL:CU407312 Ensembl:ENSSSCT00000000073 Uniprot:F1SRC2
Length = 757
Score = 242 (90.2 bits), Expect = 7.9e-17, P = 7.9e-17
Identities = 60/189 (31%), Positives = 96/189 (50%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP +CIC ++ V C +++L V + TQ LD GN L+ + FQ L L
Sbjct: 30 CPQTCICD--NSRRHVACRHQNLTEVPNAIPELTQRLDLRGNVLRVIPPAAFQD--LPYL 85
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ L C++ ++ AFRGL L+ L+ + N L +P + SL +L L GN +++
Sbjct: 86 THLDLRHCQVELVAEGAFRGLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEE 145
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTG 195
++ G F L L TL L+ + + AF GL WL+L +N ++ ++ + LP
Sbjct: 146 LRPGTFGALGALATLNLAHNALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPA- 204
Query: 196 LHGIDLHHN 204
L + LHHN
Sbjct: 205 LRRLSLHHN 213
Score = 220 (82.5 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 60/179 (33%), Positives = 89/179 (49%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ +YLS R++ + A L L N L VP++ P+L++L LSGNP++
Sbjct: 540 LRWLYLSGNRLTQVSPGALGPAQELEKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLR 599
Query: 137 QIKTGAFQPLSY-LVTLELSKCGIEVIEDAAFVGLD-SLEWLKLDNNKITTISGSNILPT 194
++ GAF+P+ L L L+ G+E I AF GL L+ L L N++ + L
Sbjct: 600 ALQEGAFRPVGRSLQHLFLNSSGLEQISPGAFSGLGPQLQSLYLQKNQLQALPPLPGLRQ 659
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
L IDL NP+ CDC L+ L RWL T + + C+ PP +K + AC
Sbjct: 660 -LELIDLSGNPFHCDCQLLPLHRWL--TGLNLRVGATCATPPSARGQRVKAAAAVFDAC 715
Score = 173 (66.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 65/248 (26%), Positives = 103/248 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP +C+C + C + L V G +TQ+LD N+ + FQ GL L
Sbjct: 389 CPRACVCVPESRHSG--CEARGLRAVPRGFPNDTQLLDLRRNHFPLVPRAAFQ--GLGRL 444
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++L C I+ +++ A GL +L+ L S N L + + P L L L N Q
Sbjct: 445 VSLHLQHCGITELEAGALAGLGSLIYLYLSDNGLSGLSATALEGAPRLGYLYLERNRFLQ 504
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-L 196
+ A L L +L L ++ + G +L WL L N++T +S + P L
Sbjct: 505 VPGAALGALPSLFSLHLQDNAVDRLAPGDLAGGRALRWLYLSGNRLTQVSPGALGPAQEL 564
Query: 197 HGIDLHHN--PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
+ L N P L GL LE + + + R +++ L ++ E
Sbjct: 565 EKLHLDRNQLPEVPTEALEGLPALLELQLSGNPLRALQEGAFRPVGRSLQHLFLNSSGLE 624
Query: 255 PQITPSTF 262
QI+P F
Sbjct: 625 -QISPGAF 631
Score = 161 (61.7 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 66/224 (29%), Positives = 103/224 (45%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L + L+ R+S + +A GL +L L+ N+L+ + TF +L L L+
Sbjct: 105 GLGRLLLLNLASNRLSALPQEALDGLGSLRRLELEGNLLEELRPGTFGALGALATLNLAH 164
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + + AFQ L L+LS + V+ A GL +L L L +N++ ++ G +
Sbjct: 165 NALVYLPPMAFQGLVRARWLQLSHNALSVLAPEALAGLPALRRLSLHHNELQSLPGLALS 224
Query: 193 PT-GLHGIDLHHNPWTC----DCLLI-GLRRWLESTKTPMAIDPICSVP-PRLSSVTIKQ 245
GL ++L HNP+T D L + GLR A+DP PRL ++ ++
Sbjct: 225 QARGLARLELGHNPFTYAGEEDGLALPGLRELRLEHGALQALDPRAFAHCPRLHTLDLRG 284
Query: 246 LSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+D L PQ L++Q G L C A P + WL
Sbjct: 285 NQLDALL-PPQGPGQLRRLQLQ-GN--PLWCGCRARP--LLEWL 322
>MGI|MGI:2443718 [details] [associations]
symbol:Lrig2 "leucine-rich repeats and immunoglobulin-like
domains 2" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443718 GO:GO:0016021 GO:GO:0005886
GO:GO:0005737 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679
GeneTree:ENSGT00690000101816 HOGENOM:HOG000113380
HOVERGEN:HBG052353 CTD:9860 OMA:FPTNHER OrthoDB:EOG41NTKF
EMBL:AK173030 EMBL:BC094228 IPI:IPI00605095 IPI:IPI00649164
RefSeq:NP_001020238.1 UniGene:Mm.34855 ProteinModelPortal:Q52KR2
SMR:Q52KR2 PhosphoSite:Q52KR2 PRIDE:Q52KR2
Ensembl:ENSMUST00000046316 GeneID:269473 KEGG:mmu:269473
UCSC:uc008que.1 UCSC:uc012cvk.1 InParanoid:Q52KR2 NextBio:392862
Bgee:Q52KR2 Genevestigator:Q52KR2 GermOnline:ENSMUSG00000032913
Uniprot:Q52KR2
Length = 1054
Score = 244 (91.0 bits), Expect = 8.1e-17, P = 8.1e-17
Identities = 75/282 (26%), Positives = 131/282 (46%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L ++ LS +++ +D AF GL+ L L+ N + + F +L L L N I
Sbjct: 312 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDIS 371
Query: 137 ---QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ + AF L L L L I+ + AF+GL+SLE+L L+NN I +I +
Sbjct: 372 WAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAFSQ 431
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
T L G+ L+ + CDC L L +WL +++ C+ P L+ +I + + + C
Sbjct: 432 THLKGLVLNTSSLLCDCHLKWLLQWLVDNNFHHSVNVSCAHPEWLAGQSILNVDLKDFVC 491
Query: 254 E----PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT--WLFDGVPIQNESMSASESHA 307
+ PQI G NV+L C + ++ ++ W D + + + E+
Sbjct: 492 DDFLKPQIRTHPESTIALRGVNVTLTCTAVSSSDSPMSTIWRKDSEILYDVDI---ENFV 548
Query: 308 VYSTEEGTEIKKSELL-IYNSNIDDNGTFVCVAENQAGSTSS 348
Y ++G ++ + +L +++ N D G + C+ N GS S
Sbjct: 549 RYRQQDGEALEYTSVLRLFSVNFTDEGKYQCIVTNHFGSNYS 590
Score = 176 (67.0 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 51/157 (32%), Positives = 82/157 (52%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ Q L+ N +K + FQ GL +L+ + + R IS + AF GL N+ +L+ H
Sbjct: 214 PHLQFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEH 271
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L V L +L +S N I++I A++ L L+LS + ++++AFV
Sbjct: 272 NNLTGVNKGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFV 331
Query: 169 GLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
GL LE L L +N++T I+ G + L +DL +N
Sbjct: 332 GLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 368
Score = 144 (55.7 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 55/187 (29%), Positives = 91/187 (48%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN +L N + ++ E F+ L+ + LS IS I + +F ++ L L+ S+
Sbjct: 119 PNITLLSLVHNLIPEINAEAFELYSA--LESLDLSSNIISEIKTSSFPRMS-LKYLNLSN 175
Query: 109 NVLQTVPSDTFPDYP-SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
N + T+ + F + SL+ + L+ N I I F+ L +L LEL + I+++E F
Sbjct: 176 NRISTLEAGCFDNLSDSLLVVKLNRNRISMIPPKVFK-LPHLQFLELKRNRIKIVEGLTF 234
Query: 168 VGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTC--DCLLIGLRRWLESTKT 224
GLDSL LK+ N I+ + G+ + ++L HN T L GLR + +
Sbjct: 235 QGLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEHNNLTGVNKGWLYGLRMLQQLYMS 294
Query: 225 PMAIDPI 231
AI+ I
Sbjct: 295 QNAIEKI 301
Score = 128 (50.1 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 51/193 (26%), Positives = 88/193 (45%)
Query: 5 IFLIATIIKIVSA-----CPTSCICKWKGGKQTVECVNKSLIT----VVEGMDPNT-QVL 54
+ ++A ++++ A CP C C+ ++C + L + G P+ L
Sbjct: 24 LLILAQALRLLPAARAGLCPAPCACRLP----LLDCSRRKLPAPSWRALSGPLPSDISSL 79
Query: 55 DYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
D + N L +N + LQ++ ++ ++ I N+ L HN++ +
Sbjct: 80 DLSHNRLSNWNNTLESQ----TLQEVKMNYNELTEIPYFG-EPTPNITLLSLVHNLIPEI 134
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGL-DSL 173
++ F Y +L L LS N I +IKT +F +S L L LS I +E F L DSL
Sbjct: 135 NAEAFELYSALESLDLSSNIISEIKTSSFPRMS-LKYLNLSNNRISTLEAGCFDNLSDSL 193
Query: 174 EWLKLDNNKITTI 186
+KL+ N+I+ I
Sbjct: 194 LVVKLNRNRISMI 206
Score = 126 (49.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 41/117 (35%), Positives = 57/117 (48%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L L F +GL L+++ L R++ I FR L+NL LD +N +
Sbjct: 315 LDLSYNQLTRLDESAF--VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNDISW 372
Query: 114 V---PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
S+ F SL KL L GN IK + AF L L L+L+ I I++ AF
Sbjct: 373 AIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNNNAIMSIQENAF 429
Score = 121 (47.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 41/153 (26%), Positives = 70/153 (45%)
Query: 36 VNKSLITVVEGMD----PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+ ++ I +VEG+ + + L N + L + F GL N++++ L ++ ++
Sbjct: 221 LKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAF--FGLNNMEELELEHNNLTGVN 278
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
GL L L S N ++ + D + L +L LS N + ++ AF LS L
Sbjct: 279 KGWLYGLRMLQQLYMSQNAIEKISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLER 338
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L + I D F L +L+ L L NN I+
Sbjct: 339 LNLGDNRVTHIADGVFRFLSNLQTLDLRNNDIS 371
Score = 89 (36.4 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
N Q LD N++ + + GL +L K+ L RI + KAF GL +L LD ++
Sbjct: 359 NLQTLDLRNNDISWAIEDASEAFSGLKSLTKLILQGNRIKSVTQKAFIGLESLEYLDLNN 418
Query: 109 NVLQTVPSDTF 119
N + ++ + F
Sbjct: 419 NAIMSIQENAF 429
Score = 86 (35.3 bits), Expect = 3.6e-13, Sum P(2) = 3.6e-13
Identities = 27/111 (24%), Positives = 48/111 (43%)
Query: 245 QLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASE 304
+L+++E+ P + L I+ G L C P +I+W DG A+
Sbjct: 594 KLTVNEM---PSFLKTPMDLTIRTGAMARLECAAEGHPTPQISWQKDG----GTDFPAAR 646
Query: 305 SHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ E I N I+D G + C+A+N AG S+N ++ ++
Sbjct: 647 ERRMHVMPED-----DVFFIANVKIEDMGIYSCMAQNIAGGLSANASLTVL 692
Score = 59 (25.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 16/90 (17%), Positives = 36/90 (40%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ G+ L C P ++ W D P+ +E H + + L+I
Sbjct: 706 VTRGETAVLQCIAGGSPAPRLNWTKDDGPLL-----VTERHFFAAANQ-------LLIIV 753
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ ++D G + C+ N G+ + + ++
Sbjct: 754 DAGLEDAGKYTCLMSNTLGTERGHIYLNVI 783
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 241 (89.9 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 85/317 (26%), Positives = 143/317 (45%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N + L G L + F +GL NL+ + ++ + A + L NL LD + N
Sbjct: 217 NLRSLVLAGMELTDIPGNAF--VGLDNLESLSFYDNKLVRVPQTALQKLPNLKFLDLNKN 274
Query: 110 VLQTVPSDTFPDYPSLMKLTLSG-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAF 167
+ + F + L +L ++ + I A L L LE + + AF
Sbjct: 275 PIHKIQEGDFKNMLRLKELGINNMGELVSIDRFALDNLPELTKLEATNNPKFSYVSRLAF 334
Query: 168 VGLDSLEWLKLDNNKITTI--SGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTP 225
L +LE L L+NN + ++ + ++ LP L I +H NP CDC++ +W+ S KT
Sbjct: 335 RDLPALESLMLNNNALNSLYQATADSLPN-LREISIHSNPLRCDCVI----QWMSSNKTT 389
Query: 226 MA-IDPI---CSVPPRLSSVTIKQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCK 277
+ ++P+ C++P + ++ + E + C P I+ TF +L + G V L C+
Sbjct: 390 IRFMEPLSMFCTMPIEVRGQRVRDVFSREPSGQCLPMISHDTFPNHLNLDIGMTVDLDCR 449
Query: 278 VSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVC 337
A PE +I W+ P N+ M + S GT L I +DD+G + C
Sbjct: 450 AMAEPEPEIYWV---TPSGNKVMMDTVSDKYQLNSAGT------LRISYIQVDDSGHYTC 500
Query: 338 VAENQAGSTSSNYTIRI 354
VA+N G+ + IR+
Sbjct: 501 VAQNTEGADTRVTAIRV 517
Score = 188 (71.2 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 56/157 (35%), Positives = 83/157 (52%)
Query: 59 NNLKTLHNEK--------FQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV 110
+ L TLH E+ F L NLQ++Y++ +IS I AF GL NL+ L + N
Sbjct: 120 SQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNR 179
Query: 111 LQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGL 170
L+ + S F P+L L + NP+ I F+PL+ L +L L+ + I AFVGL
Sbjct: 180 LKAIDSRWFESTPNLEILMIGENPVVGILDLNFKPLTNLRSLVLAGMELTDIPGNAFVGL 239
Query: 171 DSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNP 205
D+LE L +NK+ + + + LP L +DL+ NP
Sbjct: 240 DNLESLSFYDNKLVRVPQTALQKLPN-LKFLDLNKNP 275
Score = 146 (56.5 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 55/211 (26%), Positives = 91/211 (43%)
Query: 4 WIFLIATI-IKIVSA--CPTSCICK---WKGGKQT------VECVNKSLITVVEGMDPNT 51
+I L+A + + V + CP C+C+ W + T V+C + L + + +T
Sbjct: 16 FILLLAVLGLSSVHSTECPQLCVCEIRPWFTPQSTYREATTVDCNDLHLTRIPGNLSADT 75
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
QVL N + E Q L+NL ++ LS+ S I ++ L L N +
Sbjct: 76 QVLLLQSNYIARTSEELEQ---LLNLTELDLSQNNFSNIRDIGLTNMSQLTTLHLEENQI 132
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+P + D +L +L ++ N I I AF L L+ L L+ ++ I+ F
Sbjct: 133 VEMPDFSLQDLTNLQELYINHNQISSIAPNAFAGLRNLLRLHLNSNRLKAIDSRWFESTP 192
Query: 172 SLEWLKLDNNKITTISGSNILP-TGLHGIDL 201
+LE L + N + I N P T L + L
Sbjct: 193 NLEILMIGENPVVGILDLNFKPLTNLRSLVL 223
Score = 137 (53.3 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 52/162 (32%), Positives = 80/162 (49%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN ++L N + + + F+ L NL+ + L+ ++ I AF GL NL L F
Sbjct: 192 PNLEILMIGENPVVGILDLNFKP--LTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYD 249
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L VP P+L L L+ NPI +I+ G F+ + L L ++ G E++ F
Sbjct: 250 NKLVRVPQTALQKLPNLKFLDLNKNPIHKIQEGDFKNMLRLKELGINNMG-ELVSIDRFA 308
Query: 169 GLDSL-EWLKLD--NN-KITTIS--GSNILPTGLHGIDLHHN 204
LD+L E KL+ NN K + +S LP L + L++N
Sbjct: 309 -LDNLPELTKLEATNNPKFSYVSRLAFRDLPA-LESLMLNNN 348
>MGI|MGI:2182081 [details] [associations]
symbol:Lrrc4 "leucine rich repeat containing 4"
species:10090 "Mus musculus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2182081
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR026906 Pfam:PF13306
GeneTree:ENSGT00690000101682 HOGENOM:HOG000252924
HOVERGEN:HBG052359 CTD:64101 KO:K16351 OMA:CGCEAVW
OrthoDB:EOG4NGGM6 InterPro:IPR026882 PANTHER:PTHR24369:SF9
EMBL:AF300458 EMBL:DQ177325 EMBL:BC117834 IPI:IPI00169875
RefSeq:NP_619623.2 UniGene:Mm.443660 ProteinModelPortal:Q99PH1
SMR:Q99PH1 DIP:DIP-46449N STRING:Q99PH1 PhosphoSite:Q99PH1
PRIDE:Q99PH1 Ensembl:ENSMUST00000062304 GeneID:192198
KEGG:mmu:192198 UCSC:uc009bcu.1 InParanoid:Q149E5 NextBio:371238
Bgee:Q99PH1 CleanEx:MM_LRRC4 Genevestigator:Q99PH1
GermOnline:ENSMUSG00000049939 Uniprot:Q99PH1
Length = 652
Score = 240 (89.5 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 82/313 (26%), Positives = 141/313 (45%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N ++++ + F ++ +L ++ L + + I AF GL NL L+ ++ +P+
Sbjct: 156 NPIESIPSYAFNRVP--SLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNL 213
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
T P L +L +SGN +I+ G+F LS L L + + +IE AF GL SL L
Sbjct: 214 T-P-LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 271
Query: 178 LDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWL-ESTKTPMAIDPICSVP 235
L +N ++++ P L + LHHNPW CDC ++ L WL E T C P
Sbjct: 272 LAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCDILWLAWWLREYIPTNSTCCGRCHAP 331
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVP 294
+ + ++ C P I + L I E + L C+ P + + WL
Sbjct: 332 MHMRGRYLVEVDQAAFQCSAPFIMDAPRDLNISEDRMAELKCRTP--PMSSVKWLLPNGT 389
Query: 295 IQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ + AS + +GT + S +L+ D G + C+ N AG+++++ + +
Sbjct: 390 VLSH---ASRHPRISVLNDGT-LNFSRVLLI-----DTGVYTCMVTNVAGNSNASAYLNV 440
Query: 355 VLKEENVEVVTVF 367
E N + F
Sbjct: 441 SSAELNTPNFSFF 453
Score = 218 (81.8 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 65/205 (31%), Positives = 101/205 (49%)
Query: 4 WIFLIATIIKIVSACPTSC--ICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNL 61
WI L A I SA P +C +C V C + L V +G+ NT+ L+ NN+
Sbjct: 28 WI-LCAAIAAAASAGPQNCPSVCSCSNQFSKVVCTRRGLSEVPQGIPSNTRYLNLMENNI 86
Query: 62 KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
+ + + F+ L +L+ + L R I I+ AF GL +L L+ N L +PS F
Sbjct: 87 QMIQADTFRH--LHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEY 144
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLKLDN 180
L +L L NPI+ I + AF + L+ L+L + +E I + AF GL +L++L L
Sbjct: 145 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 204
Query: 181 NKITTISGSNILP-TGLHGIDLHHN 204
I + N+ P GL +++ N
Sbjct: 205 CNIKDMP--NLTPLVGLEELEMSGN 227
Score = 130 (50.8 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 28/81 (34%), Positives = 49/81 (60%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L+ +GN+ + F GL +L+K+++ ++S+I+ AF GL +LV+L+ +HN L +
Sbjct: 222 LEMSGNHFPEIRPGSFH--GLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 279
Query: 114 VPSDTFPDYPSLMKLTLSGNP 134
+P D F L++L L NP
Sbjct: 280 LPHDLFTPLRYLVELHLHHNP 300
>MGI|MGI:1916925 [details] [associations]
symbol:Pxdn "peroxidasin homolog (Drosophila)" species:10090
"Mus musculus" [GO:0004601 "peroxidase activity" evidence=ISO]
[GO:0005201 "extracellular matrix structural constituent"
evidence=ISO] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0020037 "heme binding" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO;IDA]
[GO:0031012 "extracellular matrix" evidence=ISO;IDA] [GO:0042744
"hydrogen peroxide catabolic process" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
MGI:MGI:1916925 GO:GO:0005783 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0046872 GO:GO:0005578 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0030198 GO:GO:0020037 GO:GO:0031012
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
HSSP:P21809 GO:GO:0005201 Gene3D:1.10.640.10 eggNOG:NOG262194
GeneTree:ENSGT00550000074325 HOGENOM:HOG000016084
HOVERGEN:HBG108312 CTD:7837 OMA:EPVITWN OrthoDB:EOG4J1179
EMBL:AK142872 EMBL:AC159626 EMBL:AC165078 EMBL:BC112913
IPI:IPI00461384 RefSeq:NP_852060.2 UniGene:Mm.251774
ProteinModelPortal:Q3UQ28 SMR:Q3UQ28 PhosphoSite:Q3UQ28
PaxDb:Q3UQ28 PRIDE:Q3UQ28 Ensembl:ENSMUST00000122328 GeneID:69675
KEGG:mmu:69675 UCSC:uc007ngl.2 InParanoid:Q3UQ28 NextBio:330062
Bgee:Q3UQ28 CleanEx:MM_PXDN Genevestigator:Q3UQ28 Uniprot:Q3UQ28
Length = 1475
Score = 245 (91.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 79/273 (28%), Positives = 128/273 (46%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I AFR L +L L ++N ++ +P+ F D +L L L N I+ I AF+
Sbjct: 70 RIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKG 129
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNILPTGLHGIDLHHN 204
L+ L L L IE ++ +F L LE L L NN+IT + G+ + + L N
Sbjct: 130 LASLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSN 189
Query: 205 PWTCDCLLIGLRRWLES-TKTPMA-IDPICSVPPRLSSVTIKQLSIDELACE-PQITPST 261
CDC ++ L L++ ++ A C P R+ ++ ++ +EL CE P+IT
Sbjct: 190 ALHCDCEILWLADLLKTYAQSGNAQAAATCEYPRRIQGRSVATITPEELNCERPRITSEP 249
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSE 321
++ G V C+ P+ +I WL + N +S + ++GT
Sbjct: 250 QDADVTSGNTVYFTCRAEGNPKPEIIWLRN-----NNELSMKTDSRLNLLDDGT------ 298
Query: 322 LLIYNSNIDDNGTFVCVAENQAGSTSSN-YTIR 353
L+I N+ D G + C+A+N AG + T+R
Sbjct: 299 LMIQNTQEADEGVYQCMAKNVAGEAKTQEVTLR 331
Score = 168 (64.2 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 51/180 (28%), Positives = 85/180 (47%)
Query: 4 WIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
W + K + CP+ C+C + TV C++ L+ V + P T +LD N ++
Sbjct: 19 WWAMAVVASKQGAGCPSRCLCF----RTTVRCMHL-LLEAVPAVAPQTSILDLRFNRIRE 73
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
+ F++ L +L + L+ +I I + AF L NL L N +Q++ F
Sbjct: 74 IQPGAFRR--LRSLNTLLLNNNQIKKIPNGAFEDLENLKYLYLYKNEIQSIDRQAFKGLA 131
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
SL +L L N I+ + +FQ L L L L I + F L+S++ L+LD+N +
Sbjct: 132 SLEQLYLHFNQIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSNAL 191
Score = 138 (53.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 52/143 (36%), Positives = 73/143 (51%)
Query: 84 RCRISVIDS-KAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGA 142
RC ++++ A T+++DL F N ++ + F SL L L+ N IK+I GA
Sbjct: 45 RCMHLLLEAVPAVAPQTSILDLRF--NRIREIQPGAFRRLRSLNTLLLNNNQIKKIPNGA 102
Query: 143 FQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGID 200
F+ L L L L K I+ I+ AF GL SLE L L N+I T+ + LP L +
Sbjct: 103 FEDLENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFNQIETLDPESFQHLPK-LERLF 161
Query: 201 LHHNPWTCDCLLIGLRRWLESTK 223
LH+N T L+ G LES K
Sbjct: 162 LHNNRITH--LVPGTFSQLESMK 182
Score = 134 (52.2 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 37/117 (31%), Positives = 58/117 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N +K + N F+ L NL+ +YL + I ID +AF+GL +L L N
Sbjct: 86 NTLLLN--NNQIKKIPNGAFED--LENLKYLYLYKNEIQSIDRQAFKGLASLEQLYLHFN 141
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSK----CGIEVI 162
++T+ ++F P L +L L N I + G F L + L L C E++
Sbjct: 142 QIETLDPESFQHLPKLERLFLHNNRITHLVPGTFSQLESMKRLRLDSNALHCDCEIL 198
Score = 91 (37.1 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 33/115 (28%), Positives = 49/115 (42%)
Query: 245 QLSIDELACEPQITPSTFY-----LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
Q + L +P++TP F + ++ G NV L C PE ITW DGV +
Sbjct: 508 QKVVAHLTVQPRVTP-VFASIPSDMTVEVGTNVQLPCSSQGEPEPAITWNKDGVQV---- 562
Query: 300 MSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ES + + EG L I + D G + CVA N G S + + +
Sbjct: 563 ---TESGKFHISPEGF------LTINDVGTADAGRYECVARNTIGYASVSMVLSV 608
Score = 65 (27.9 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 26/91 (28%), Positives = 34/91 (37%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
PQ T + + EG+ V C P+ I W G +S H V S+ G
Sbjct: 430 PQFTVTPQSRVVIEGQTVDFQCAAKGHPQPVIAWTKGG-----SQLSVDRRHLVLSS--G 482
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
T L I + D G + C A N GS
Sbjct: 483 T------LRISGVALHDQGQYECQAVNIIGS 507
Score = 56 (24.8 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 30/111 (27%), Positives = 46/111 (41%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
E+ G++V+L C + P +ITW D P+ + V T G L
Sbjct: 349 EVLVGESVTLECSATGHPLPQITWTRGDRTPLPIDPR-------VNITPSGG------LY 395
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLI 374
I N D+G + C A N S + T I+++ + TV P V+I
Sbjct: 396 IQNVAQSDSGEYTCFASNSVDSIHA--TAFIIVQA--LPQFTVTPQSRVVI 442
>WB|WBGene00004854 [details] [associations]
symbol:slt-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISS] [GO:0005102 "receptor binding"
evidence=ISS;IPI] [GO:0033563 "dorsal/ventral axon guidance"
evidence=IGI;IMP] [GO:0001764 "neuron migration" evidence=IMP]
[GO:0048843 "negative regulation of axon extension involved in axon
guidance" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0001764
GO:GO:0005576 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005102 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 PROSITE:PS01186
InterPro:IPR001791 SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR006207
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 HSSP:P00740
GO:GO:0033563 GeneTree:ENSGT00700000104083 EMBL:Z69792
GO:GO:0048843 EMBL:AL022270 PIR:D89711 PIR:T22025
RefSeq:NP_510437.2 ProteinModelPortal:G5EFX6 SMR:G5EFX6
EnsemblMetazoa:F40E10.4 GeneID:181562 KEGG:cel:CELE_F40E10.4
CTD:181562 WormBase:F40E10.4 OMA:KSISHIA NextBio:914450
Uniprot:G5EFX6
Length = 1410
Score = 259 (96.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 74/249 (29%), Positives = 113/249 (45%)
Query: 6 FLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH 65
F+ +I + CP C+C +TV CV + L V + + +T LD N + +
Sbjct: 5 FIFILLIPESATCPAECVCV----DRTVSCVGQQLTEVPQNIPNDTIRLDLQDNEITKIG 60
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F L+NL+ + L +I I +++F L L L S N ++ +P + F + L
Sbjct: 61 PNDFSS--LMNLKALQLMDNQIVTIHNQSFSSLVFLQKLRLSRNRIRHLPDNVFQNNLKL 118
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L LS N I + Q +L L L K I +E+ SLE L L+ N++TT
Sbjct: 119 THLDLSENDITVVSDAQLQGPEFLEVLNLDKNHIFCLENNVISSWVSLEVLTLNGNRLTT 178
Query: 186 ISG-SNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIK 244
SN +DL +NPW CDC L +R+WLE K +C+ P L +I+
Sbjct: 179 FEEPSN---ARFRQLDLFNNPWNCDCRLRWMRKWLE--KAEGQNKTVCATPLNLQGSSIE 233
Query: 245 QLSIDELAC 253
L + C
Sbjct: 234 ILQDKFMTC 242
Score = 177 (67.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 54/166 (32%), Positives = 77/166 (46%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C G TV+C + L V + P+T + N + ++ + F+ L NL
Sbjct: 260 CPLPCTCT---GT-TVDCRDSGLTYVPTNLPPSTTEIRLEQNQISSIPSHSFKN--LKNL 313
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++ LS+ I+ I KAF GL NL L N + + SDTF SL L L+ N +
Sbjct: 314 TRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDLKSDTFEGLGSLQLLLLNANQLTC 373
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
I+ G F + L L L I+ I + F L SL L L N +
Sbjct: 374 IRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLSTLHLAKNPL 419
Score = 162 (62.1 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 54/180 (30%), Positives = 77/180 (42%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + +IS I S +F+ L NL LD S N++ + F +L L L GN I +
Sbjct: 291 EIRLEQNQISSIPSHSFKNLKNLTRLDLSKNIITEIQPKAFLGLHNLHTLVLYGNNITDL 350
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-TGLH 197
K+ F+ L L L L+ + I F + L L L +N I +IS T L
Sbjct: 351 KSDTFEGLGSLQLLLLNANQLTCIRRGTFDHVPKLSMLSLYDNDIKSISEVTFQNLTSLS 410
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI---CSVPPRLSSVTIKQLSIDELACE 254
+ L NP CDC L +WL I+ C P RL L ++ C+
Sbjct: 411 TLHLAKNPLICDCNL----QWLAQINLQKNIETSGARCEQPKRLRKKKFATLPPNKFKCK 466
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 51/171 (29%), Positives = 83/171 (48%)
Query: 14 IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPN--TQVLDYTGNNLKTLH-NEKFQ 70
I S CPT C C G TV+C + L T+ + P TQ+L +GNN+ T+ N
Sbjct: 481 IDSICPTQCDCY--G--TTVDCNKRGLNTIPTSI-PRFATQLL-LSGNNISTVDLNSNIH 534
Query: 71 KMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTL 130
L NL+ + LS I+ I+ K+F L+ L +L + N L S + +L L L
Sbjct: 535 V--LENLEVLDLSNNHITFINDKSFEKLSKLRELRLNDNKLHHFSSMVLDEQSNLEILDL 592
Query: 131 SGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
SGN I+ + F + + E+ G +++ D + L + WL+ +++
Sbjct: 593 SGNNIQCFSSIFFNKATRI--REIKVIGNDLLCDCRILPL--MSWLRSNSS 639
Score = 128 (50.1 bits), Expect = 0.00039, P = 0.00039
Identities = 50/201 (24%), Positives = 84/201 (41%)
Query: 84 RCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAF 143
RC + S R + +L N + +P+ SL KL LS N + ++ F
Sbjct: 689 RCSNKNLTSFPSRIPFDTTELYLDANYINEIPAHDLNRLYSLTKLDLSHNRLISLENNTF 748
Query: 144 QPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLH 202
L+ L TL +S + ++ AF GL++L L L N I+ + S T + I +
Sbjct: 749 SNLTRLSTLIISYNKLRCLQPLAFNGLNALRILSLHGNDISFLPQSAFSNLTSITHIAVG 808
Query: 203 HNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQITPSTF 262
N CDC + +W++S I C P +S+ + + C+ ++ P+
Sbjct: 809 SNSLYCDCNMAWFSKWIKSKFIEAGIAR-CEYPNTVSNQLLLTAQPYQFTCDSKV-PTKL 866
Query: 263 YLEIQEGKNVSLLCKVSAIPE 283
+ N CK +AI E
Sbjct: 867 ATKCDLCLNSP--CKNNAICE 885
Score = 37 (18.1 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 578 DFGLPKVPTHFPALVPATAYYR 599
D GL VPT+ P P+T R
Sbjct: 275 DSGLTYVPTNLP---PSTTEIR 293
>UNIPROTKB|O75325 [details] [associations]
symbol:LRRN2 "Leucine-rich repeat neuronal protein 2"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0007165
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:CH471067
GO:GO:0004872 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000252914
HOVERGEN:HBG052361 EMBL:AF030435 EMBL:AY358290 EMBL:AK312408
EMBL:AL512306 EMBL:BC034047 EMBL:BC068541 IPI:IPI00025256
RefSeq:NP_006329.2 RefSeq:NP_963924.1 UniGene:Hs.26312
ProteinModelPortal:O75325 SMR:O75325 IntAct:O75325 STRING:O75325
PhosphoSite:O75325 PRIDE:O75325 DNASU:10446 Ensembl:ENST00000367175
Ensembl:ENST00000367176 Ensembl:ENST00000367177 GeneID:10446
KEGG:hsa:10446 UCSC:uc001hbe.1 CTD:10446 GeneCards:GC01M204586
H-InvDB:HIX0001502 HGNC:HGNC:16914 HPA:HPA029124 MIM:605492
neXtProt:NX_O75325 PharmGKB:PA162394661 InParanoid:O75325
OMA:LHQQTVE OrthoDB:EOG4JWVCZ PhylomeDB:O75325 GenomeRNAi:10446
NextBio:39593 ArrayExpress:O75325 Bgee:O75325 CleanEx:HS_LRRN2
Genevestigator:O75325 GermOnline:ENSG00000170382 Uniprot:O75325
Length = 713
Score = 240 (89.5 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 84/319 (26%), Positives = 150/319 (47%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N + L G NL+ + + + GL +L+ + +++ + +A + L LD + N
Sbjct: 214 NLRSLVLAGMNLREISDYALE--GLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKN 271
Query: 110 VLQTVPSDTFPDYPSLMKLTLSG-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAF 167
LQ V F + L +L L+ + I A L L L+++ + I AF
Sbjct: 272 PLQRVGPGDFANMLHLKELGLNNMEELVSIDKFALVNLPELTKLDITNNPRLSFIHPRAF 331
Query: 168 VGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTP 225
L +E L L+NN ++ + + LP L + LH NP CDC++ RW +T T
Sbjct: 332 HHLPQMETLMLNNNALSALHQQTVESLPN-LQEVGLHGNPIRCDCVI----RWANATGTR 386
Query: 226 MA-IDP---ICSVPPRLSSVTIKQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCK 277
+ I+P +C+ PP L + ++++ E+ C P I+P +F L++ G+++ L C+
Sbjct: 387 VRFIEPQSTLCAEPPDLQRLPVREVPFREMTDHCLPLISPRSFPPSLQVASGESMVLHCR 446
Query: 278 VSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVC 337
A PE +I W+ ++ A + VY EGT L + ++ G + C
Sbjct: 447 ALAEPEPEIYWVTPA-GLRLTPAHAGRRYRVYP--EGT------LELRRVTAEEAGLYTC 497
Query: 338 VAENQAGSTSSNYTIRIVL 356
VA+N G+ + T+ +V+
Sbjct: 498 VAQNLVGADTK--TVSVVV 514
Score = 189 (71.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 53/159 (33%), Positives = 83/159 (52%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P L N L L + F GL +LQ++YL+ ++ I +AF GL+NL+ L +
Sbjct: 117 PQLLSLHLEENQLTRLEDHSFA--GLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNS 174
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N+L+ + S F P+L L + GN + I F+PL+ L +L L+ + I D A
Sbjct: 175 NLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRPLANLRSLVLAGMNLREISDYALE 234
Query: 169 GLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNP 205
GL SLE L +N++ + + +P GL +DL+ NP
Sbjct: 235 GLQSLESLSFYDNQLARVPRRALEQVP-GLKFLDLNKNP 272
Score = 148 (57.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/206 (26%), Positives = 86/206 (41%)
Query: 1 MMYWIFLIATIIKIVS---ACPTSCICK---WKGGKQ------TVECVNKSLITVVEGMD 48
++ W+ + +V CP C C+ W + TV+C + L V +
Sbjct: 9 LLAWVAGATAAVPVVPWHVPCPPQCACQIRPWYTPRSSYREATTVDCNDLFLTAVPPALP 68
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMG-LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFS 107
TQ L N++ + + +G L NL ++ LS+ S F L L+ L
Sbjct: 69 AGTQTLLLQSNSIVRVDQSE---LGYLANLTELDLSQNSFSDARDCDFHALPQLLSLHLE 125
Query: 108 HNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
N L + +F SL +L L+ N + +I AF LS L+ L L+ + I+ F
Sbjct: 126 ENQLTRLEDHSFAGLASLQELYLNHNQLYRIAPRAFSGLSNLLRLHLNSNLLRAIDSRWF 185
Query: 168 VGLDSLEWLKLDNNKITTISGSNILP 193
L +LE L + NK+ I N P
Sbjct: 186 EMLPNLEILMIGGNKVDAILDMNFRP 211
Score = 141 (54.7 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 44/151 (29%), Positives = 70/151 (46%)
Query: 36 VNKSLITVVEG----MDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N +L+ ++ M PN ++L GN + + + F+ L NL+ + L+ + I
Sbjct: 172 LNSNLLRAIDSRWFEMLPNLEILMIGGNKVDAILDMNFRP--LANLRSLVLAGMNLREIS 229
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
A GL +L L F N L VP P L L L+ NP++++ G F + +L
Sbjct: 230 DYALEGLQSLESLSFYDNQLARVPRRALEQVPGLKFLDLNKNPLQRVGPGDFANMLHLKE 289
Query: 152 LELSKCGIEV-IEDAAFVGLDSLEWLKLDNN 181
L L+ V I+ A V L L L + NN
Sbjct: 290 LGLNNMEELVSIDKFALVNLPELTKLDITNN 320
>UNIPROTKB|P0C6S8 [details] [associations]
symbol:LINGO3 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
eggNOG:NOG278536 HOGENOM:HOG000246971 HOVERGEN:HBG057546
EMBL:AC004152 IPI:IPI00376131 RefSeq:NP_001094861.1
UniGene:Hs.371587 ProteinModelPortal:P0C6S8 SMR:P0C6S8
PhosphoSite:P0C6S8 DMDM:182662399 PRIDE:P0C6S8
Ensembl:ENST00000404279 GeneID:645191 KEGG:hsa:645191
UCSC:uc010dsx.1 CTD:645191 GeneCards:GC19M002289 H-InvDB:HIX0202769
HGNC:HGNC:21206 MIM:609792 neXtProt:NX_P0C6S8 PharmGKB:PA162394097
InParanoid:P0C6S8 OMA:EIDNWPL OrthoDB:EOG4THVSV GenomeRNAi:645191
NextBio:117179 Bgee:P0C6S8 CleanEx:HS_LINGO3 Genevestigator:P0C6S8
Uniprot:P0C6S8
Length = 592
Score = 238 (88.8 bits), Expect = 1.3e-16, P = 1.3e-16
Identities = 79/306 (25%), Positives = 141/306 (46%)
Query: 61 LKTLHNEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
+ +L ++ F+++ GL++L+ + + + + + RGL NL L +H + VP+
Sbjct: 210 IASLEDQNFRRLPGLLHLE--IDNWPLLEEVAAGSLRGL-NLTSLSVTHTNITAVPAAAL 266
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L LS NPI + G+F+ L L L L+ + V+E AF+GL + L L
Sbjct: 267 RHQAHLTCLNLSHNPISTVPRGSFRDLVRLRELHLAGALLAVVEPQAFLGLRQIRLLNLS 326
Query: 180 NNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAID---PICSVP 235
NN ++T+ S L + + NP CDC L+ W+ + + D P C+ P
Sbjct: 327 NNLLSTLEESTFHSVNTLETLRVDGNPLACDCRLL----WIVQRRKTLNFDGRLPACATP 382
Query: 236 PRLSSVTIKQL--SI--DELAC-EPQITPSTFY-LEIQEGKNVSLLCKVSAIPEAKITWL 289
+ ++ L S+ + C +P+I + G++V LC+ P + W+
Sbjct: 383 AEVRGDALRNLPDSVLFEYFVCRKPKIRERRLQRVTATAGEDVRFLCRAEGEPAPTVAWV 442
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS-- 347
P Q+ ++A+ + GT L I ++ D+GT+ CVA N G+ +
Sbjct: 443 ---TP-QHRPVTATSAGRARVLPGGT------LEIQDARPQDSGTYTCVASNAGGNDTYF 492
Query: 348 SNYTIR 353
+ T+R
Sbjct: 493 ATLTVR 498
Score = 164 (62.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 49/174 (28%), Positives = 81/174 (46%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + + V C + L V +G+ T++L+ + N ++ L+ L L
Sbjct: 25 CPARCECTVQ--TRAVACTRRRLTAVPDGIPAETRLLELSRNRIRCLNPGDLA--ALPAL 80
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+++ LS I+ ++ AF L L L N L+ +P F +L L LS N +
Sbjct: 81 EELDLSENAIAHVEPGAFANLPRLRVLRLRGNQLKLIPPGVFTRLDNLTLLDLSENKLVI 140
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
+ FQ L L LE+ + + AF GL +LE L L+ +T +SG ++
Sbjct: 141 LLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLALEELTLERCNLTALSGESL 194
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 54/208 (25%), Positives = 88/208 (42%)
Query: 30 KQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISV 89
+ + C+N + + P + LD + N + H E L L+ + L ++ +
Sbjct: 63 RNRIRCLNPGDLAAL----PALEELDLSENAIA--HVEPGAFANLPRLRVLRLRGNQLKL 116
Query: 90 IDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYL 149
I F L NL LD S N L + TF D SL +L + N + + AF L L
Sbjct: 117 IPPGVFTRLDNLTLLDLSENKLVILLDYTFQDLHSLRRLEVGDNDLVFVSRRAFAGLLAL 176
Query: 150 VTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWT 207
L L +C + + + L SL L+L + I ++ N LP LH +++ + P
Sbjct: 177 EELTLERCNLTALSGESLGHLRSLGALRLRHLAIASLEDQNFRRLPGLLH-LEIDNWP-L 234
Query: 208 CDCLLIGLRRWLESTKTPMAIDPICSVP 235
+ + G R L T + I +VP
Sbjct: 235 LEEVAAGSLRGLNLTSLSVTHTNITAVP 262
>ZFIN|ZDB-GENE-050320-95 [details] [associations]
symbol:islr2 "immunoglobulin superfamily containing
leucine-rich repeat 2" species:7955 "Danio rerio" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-050320-95 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CTD:57611 HOGENOM:HOG000113108 HOVERGEN:HBG100863 EMBL:BC090831
IPI:IPI00510044 RefSeq:NP_001013541.1 UniGene:Dr.120799
ProteinModelPortal:Q5BL20 IntAct:Q5BL20 STRING:Q5BL20 GeneID:541396
KEGG:dre:541396 InParanoid:Q5BL20 NextBio:20879208
ArrayExpress:Q5BL20 Uniprot:Q5BL20
Length = 712
Score = 238 (88.8 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 77/296 (26%), Positives = 127/296 (42%)
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
N + LS +I V+ SK F +T + L +HN + TV DT L L +S N I
Sbjct: 54 NASTLSLSANKIKVLKSKTFVNVTQVTSLWLAHNEIITVERDTLAPLIQLKNLDISNNKI 113
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPT 194
L L L+++ + I AF L L ++++NNK TTI G+
Sbjct: 114 VHFPWEDLANLGALQLLKMNNNEMVSIPKNAFSNLKDLRSIRINNNKFTTIVQGTFDSLA 173
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWL--ESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
+ + + HNP+ C C L LR W+ S P + C P L + S+ +L
Sbjct: 174 AMSHLQIFHNPFICSCNLEWLRDWILKSSISIPEQNNIACDAPSHLKGSQVT--SMPKLN 231
Query: 253 CE-PQIT----PSTFYLEIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESH 306
C+ P ++ P+ E+ EG V L C+ P+ ++TW +F G + + A
Sbjct: 232 CKAPSVSITYQPNIEKTELYEGYMVMLYCETKGTPKPEVTWEIFAGNQLITFPLPAIVEK 291
Query: 307 A---VYSTEEGTEI---KKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVL 356
+ + T + L++ + + G + C A N G S+ +R+V+
Sbjct: 292 SDIPINGPPTNTRFLVFQNGTLIVPRMSKKEEGNYTCSAVNDIGKAESS--VRLVV 345
Score = 165 (63.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/181 (24%), Positives = 80/181 (44%)
Query: 4 WIFLIA---TIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ LIA +I CP C C K Q V+C K L+ V G+ N L + N
Sbjct: 5 YLMLIALGTALIGNAHCCPKQCACSDKYNHQFVDCAYKDLVEVPVGLPSNASTLSLSANK 64
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
+K L ++ F + + + ++L+ I ++ L L +LD S+N + P +
Sbjct: 65 IKVLKSKTF--VNVTQVTSLWLAHNEIITVERDTLAPLIQLKNLDISNNKIVHFPWEDLA 122
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
+ +L L ++ N + I AF L L ++ ++ I F L ++ L++ +
Sbjct: 123 NLGALQLLKMNNNEMVSIPKNAFSNLKDLRSIRINNNKFTTIVQGTFDSLAAMSHLQIFH 182
Query: 181 N 181
N
Sbjct: 183 N 183
>UNIPROTKB|F1NZH1 [details] [associations]
symbol:SLITRK6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099859 OMA:YFELKAN
EMBL:AADN02029493 EMBL:AADN02029494 EMBL:AADN02029495
IPI:IPI00573056 Ensembl:ENSGALT00000027325 Uniprot:F1NZH1
Length = 826
Score = 239 (89.2 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 75/252 (29%), Positives = 115/252 (45%)
Query: 10 TIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVE-GMDPNTQV-LDYTGNNLKTLHNE 67
+ I++ +C + C C+ K + C + + V E + P+ L+ N L LH
Sbjct: 22 SFIRVRGSCQSLCSCEDKDDTVIINCEERGIKMVSEINVPPSRPFHLNLLNNGLTMLHVN 81
Query: 68 KFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMK 127
F GLVN ++L I+ I+ AF GL L L +HN L+ + DTF +L
Sbjct: 82 DFA--GLVNAISLHLGFNNIADIEPGAFNGLNLLKQLHINHNSLEILKEDTFDGLENLEF 139
Query: 128 LTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
L N I I+ AF LS L L L+ IE + F + L L L N++ T+
Sbjct: 140 LQADNNFITVIEASAFSKLSRLKVLILNDNAIEYLPPNIFRFVP-LTHLDLRGNQLQTLP 198
Query: 188 GSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI--DPICSVPPRLSSVTI 243
L G + + L N W C+C L+ L+ WLE+ P +I D +C+ PP + +
Sbjct: 199 YVGFLEHIGRILDLQLEDNKWACNCDLLQLKTWLENMP-PQSIIGDVVCNSPPVIKGSIL 257
Query: 244 KQLSIDELACEP 255
+L + L P
Sbjct: 258 NRLRKESLCPIP 269
Score = 221 (82.9 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 71/251 (28%), Positives = 117/251 (46%)
Query: 18 CPTSCICK--WKGGKQTVECVNKSLITVVE-GMDP-NTQVLDYTGNNLKTLHNEKFQKMG 73
CP C C G + C +++ ++ + G P N + L GN ++TL K M
Sbjct: 327 CPIPCHCTSHMLSGV-LMHCQERNIESLSDLGPPPTNPKKLILAGNIIQTLL--KSDLMD 383
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
+L+ ++L RI +++ AF LT L L + N L + + F L L L N
Sbjct: 384 YASLEMLHLGNNRIEILEEGAFMNLTRLQKLYLNGNHLTKLSQNLFLGLQHLEYLYLEYN 443
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
IK++ G F + L L L+ ++ + F G+ L L L N+ + + SN+L
Sbjct: 444 AIKEVLPGTFNTMPKLKVLYLNNNLLQTLPPHIFSGVP-LARLNLKTNQFSHLPVSNVLD 502
Query: 194 T--GLHGIDLHHNPWTCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQLSIDE 250
L I+L +NPW C C +GL++W++ +K+ M C P L +K L+ E
Sbjct: 503 ELDMLVQIELENNPWDCTCDSVGLQKWIQKLSKSTMMGGIFCKSPGHLKKKELKSLN-SE 561
Query: 251 LACEPQITPST 261
+ C P ++ T
Sbjct: 562 VLC-PDLSCKT 571
>UNIPROTKB|F1RHM5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:CT737345
Ensembl:ENSSSCT00000011101 Uniprot:F1RHM5
Length = 473
Score = 234 (87.4 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 69/210 (32%), Positives = 99/210 (47%)
Query: 54 LDYTGN-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD + N L+ + F+ GL L ++L RC + + FRGL L L N LQ
Sbjct: 110 LDLSDNAQLRAVDPATFR--GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQ 167
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+P D F D +L L L GN I + AF+ L L L L + + + AF L
Sbjct: 168 ALPDDAFRDLGNLTHLFLHGNRIPSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 227
Query: 173 LEWLKLDNNKITTISGSNILPT-GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L N ++ +S + P L + L+ NPW CDC L WL+ + + P
Sbjct: 228 LMTLYLFANNLSALSAEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQQFRGSSSELP- 286
Query: 232 CSVPPRLSSVTIKQLSIDEL-ACEPQITPS 260
CS+PPRL+ +K+L+ +L C PS
Sbjct: 287 CSLPPRLAGRDLKRLATTDLEGCFVAAGPS 316
Score = 176 (67.0 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 58/208 (27%), Positives = 95/208 (45%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ W+ + ++ + CP +C+C + K T C + L V + +Q + GN
Sbjct: 11 LLAWVLWLQAW-RVAAPCPGACVC-YNEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNR 68
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTF 119
+ + F+ NL ++L ++ ID+ AF GL L LD S N L+ V TF
Sbjct: 69 ITYVPAASFRACR--NLTILWLHSNALARIDATAFAGLVLLEQLDLSDNAQLRAVDPATF 126
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L ++++ G F+ L+ L L L G++ + D AF L +L L L
Sbjct: 127 RGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNGLQALPDDAFRDLGNLTHLFLH 186
Query: 180 NNKITTISGSNILPTGLHGID---LHHN 204
N+I ++ GLH +D LH N
Sbjct: 187 GNRIPSVPERAF--RGLHSLDRLLLHQN 212
>UNIPROTKB|F1NEZ4 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:LQADYNY
EMBL:AADN02073144 IPI:IPI00582200 Ensembl:ENSGALT00000014971
Uniprot:F1NEZ4
Length = 831
Score = 238 (88.8 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 87/297 (29%), Positives = 133/297 (44%)
Query: 5 IFLIATIIKIVSACPTSCICKWKG--GKQTVECVNKSLITVVE-GMDPNT-QVLDYTGNN 60
I + T + CP CIC + V C K + + E P T + L T N
Sbjct: 305 IMVYQTKSPVPITCPDGCICTSQSLDNGLNVNCQEKKISNISELHPKPTTPKKLYLTSNY 364
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
L+ ++ + ++L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 365 LQVIYRTDLAEYSSLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEILYPSMFD 422
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
SL L L N IK+I F LS L L L+ + + D F G SL L L N
Sbjct: 423 GLQSLQYLYLEYNVIKEILPHTFDTLSNLHLLFLNNNLLRSLPDNVFGGT-SLTRLNLRN 481
Query: 181 NKITTISGSNILP--TGLHGIDLHHNPWTCDCLLIGLRRWLES--------TKTPMAIDP 230
N + + +L + L IDL NPW C C ++GLR W+E + P+ I+
Sbjct: 482 NHFSHLPVRGVLDRLSALIQIDLQENPWDCTCDIMGLRNWIEQVTDQNSQQSNPPVVINE 541
Query: 231 -ICSVPPRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVS--AIPE 283
IC P + S +K LS + + E P ++ S+ L + + ++ L +S + PE
Sbjct: 542 VICESPTKHSGEHLKFLSKEAICPENPSLSESSL-LPMNQNTDMPHLLGISPSSYPE 597
Score = 214 (80.4 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 70/239 (29%), Positives = 107/239 (44%)
Query: 18 CPTS-CICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGL 74
C S C C+ K + C NK T+ + P +++ L GN L L +F +
Sbjct: 3 CSKSRCPCEEKENVLNINCENKGFTTISLLLPPPSKIYQLFLNGNALTRLFPNEF--VNY 60
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
N ++L + I + AF GL L L ++N L+ + DTF SL L N
Sbjct: 61 SNAVTLHLGNNDMQEIHTGAFSGLRTLKRLHLNNNKLEVLKEDTFLGLESLEYLQADYNY 120
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
I I+ GAF L+ L L L+ + + F + L L L N++ + + +L
Sbjct: 121 ISAIEAGAFNKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKMMPFAGVLEH 179
Query: 195 --GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
G+ I L NPW C C L+ L+ WL+ T T + +C P RL + QL+ +L
Sbjct: 180 IGGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCETPFRLHGKDVTQLTRQDL 237
>UNIPROTKB|F1N5L8 [details] [associations]
symbol:SLITRK4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:139065 OMA:TVFVAFC
EMBL:DAAA02067886 IPI:IPI00731735 RefSeq:XP_002699658.1
RefSeq:XP_609417.2 Ensembl:ENSBTAT00000015639 GeneID:530936
KEGG:bta:530936 NextBio:20875355 Uniprot:F1N5L8
Length = 837
Score = 238 (88.8 bits), Expect = 2.5e-16, P = 2.5e-16
Identities = 73/255 (28%), Positives = 121/255 (47%)
Query: 10 TIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLH 65
T + ++ CP C CK +V C K++ ++ E + P N + L GN++K +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPSNAKKLHVNGNSIKDVD 393
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F + ++L ++L +I+ I FR LTNL L + N ++ + + F +L
Sbjct: 394 ISDFTEFEGLDL--LHLGSNQITAIKGDVFRNLTNLRRLYLNGNQIERLYPEMFSGLHNL 451
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L N IK+I G F + L L L+ ++ + F G L L L NNK
Sbjct: 452 QYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMY 510
Query: 186 ISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVT 242
+ S +L L IDL NPW C C L+ L+ WLE + + + C P + +++
Sbjct: 511 LPVSGVLDQLQALTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVMKELKCETPVQFANIE 570
Query: 243 IKQLSIDELACEPQI 257
+K L +E+ C P++
Sbjct: 571 LKSLK-NEILC-PKL 583
Score = 201 (75.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 84/281 (29%), Positives = 122/281 (43%)
Query: 1 MMYWIFLI-ATIIKIVSA--------CPTSCICKWKGGKQTVECVNKSLITVVEGMDP-- 49
M W+FLI + +I +A C C C V C S+ + P
Sbjct: 1 MFLWLFLILSALISSTNADSDISVEICNV-CSCVSVENVLYVNCEKVSVYRPNQLKPPWS 59
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMG-LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
N L++ N L L+ F V+LQ L ++ I+ AF GL+ L L ++
Sbjct: 60 NFYHLNFQNNFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGLSALKQLHLNN 116
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L+ + +DTF +L L N IK I+ GAF L L L L+ I + D F
Sbjct: 117 NELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF- 175
Query: 169 GLDSLEWLKLDNNKITTISGSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPM 226
SL L + N+I + +L G + + L NPW C C L+ L+ WLE+ +
Sbjct: 176 RFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNI 235
Query: 227 AI-DPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEI 266
I + IC P L +K+ + EL C P T S F + I
Sbjct: 236 YIGEAICETPSDLYGRLLKETNKQEL-C-PMGTGSDFDVRI 274
>UNIPROTKB|G3N2N1 [details] [associations]
symbol:SLITRK2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
CTD:84631 OMA:LQADYNY EMBL:DAAA02067944 RefSeq:XP_002699667.1
RefSeq:XP_591589.3 UniGene:Bt.78166 Ensembl:ENSBTAT00000057033
GeneID:540117 KEGG:bta:540117 NextBio:20878426 Uniprot:G3N2N1
Length = 844
Score = 238 (88.8 bits), Expect = 2.6e-16, P = 2.6e-16
Identities = 81/291 (27%), Positives = 131/291 (45%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMDP---NTQVLDYTGN 59
I + T + CP+SC+C + V C + T + + P + + L TGN
Sbjct: 327 IMVYQTKSPVPLTCPSSCVCTSQSSDNGLNVNCQERKF-TNISDLQPKPTSPKKLYLTGN 385
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+ ++ + ++L ++L RI+VI AF LT+L L + N L+ + F
Sbjct: 386 YLQMVYKNDLLEYSSLDL--LHLGNNRIAVIQEGAFTNLTSLRRLYLNGNYLEVLFPAMF 443
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
SL L L N IK+IK F L L L L+ + + D F G +L L L
Sbjct: 444 DGLQSLQYLYLEYNVIKEIKPLTFDALINLQLLFLNNNLLRSLPDNIFGGT-ALTRLNLR 502
Query: 180 NNKITTISGSNIL---PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVP 235
NN + + +L P + IDL NPW C C ++GL+ W E +P+ I+ + C P
Sbjct: 503 NNHFSHLPVKGVLDQLPAFIQ-IDLQENPWDCTCDIMGLKDWTEHANSPVIINEVTCESP 561
Query: 236 PRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNV--SLLCKVSAIPE 283
+ + +K L + + + P ++ T L + + SL S+ PE
Sbjct: 562 AKHAGEILKFLGREAICPDGPNLSDGTV-LSMNHNTDTPRSLSVSPSSYPE 611
Score = 223 (83.6 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 72/245 (29%), Positives = 109/245 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLV 75
C C+C+ K + C NK TV P ++ L GN L L+ +F +
Sbjct: 29 CKIRCLCEEKENVLNINCENKGFTTVSLLQPPQYRIYQLFLNGNLLTRLYPNEF--VNYS 86
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
N ++L + I + AF GL L L ++N L+ + DTF SL L N I
Sbjct: 87 NAVTLHLGNNGLQEIRTGAFSGLKTLKRLHLNNNKLEVLREDTFLGLESLEYLQADYNYI 146
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT- 194
I+ GAF L+ L L L+ + + F + L L L N++ + + +L
Sbjct: 147 SAIEAGAFSKLNKLKVLILNDNLLLSLPSNVFRFV-LLTHLDLRGNRLKLMPFAGVLEHI 205
Query: 195 -GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
G+ I L NPW C C L+ L+ WL+ T T + +C P RL + QL+ +L C
Sbjct: 206 GGIMEIQLEENPWNCTCDLLPLKAWLD-TITVFVGEIVCETPFRLHGKDVTQLTRQDL-C 263
Query: 254 EPQIT 258
+ T
Sbjct: 264 PRKST 268
Score = 44 (20.5 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 572 RDGYPVDFGLPKV-PTHFPALVPATAYYRTLPHRRHTAANPNNRYSREAE 620
R G+ D +P++ PT PAL P A + P + P S++ +
Sbjct: 274 RGGH-TDTHIPRLSPTLNPALNPTRAPKASRPPKMRNRPTPRVTVSKDRQ 322
>UNIPROTKB|O94898 [details] [associations]
symbol:LRIG2 "Leucine-rich repeats and immunoglobulin-like
domains protein 2" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 GO:GO:0005737
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 HOGENOM:HOG000113380
HOVERGEN:HBG052353 EMBL:AB018349 EMBL:AL161998 IPI:IPI00478892
PIR:T47152 RefSeq:NP_055628.1 UniGene:Hs.448972 UniGene:Hs.729143
ProteinModelPortal:O94898 SMR:O94898 IntAct:O94898 STRING:O94898
PhosphoSite:O94898 PaxDb:O94898 PRIDE:O94898
Ensembl:ENST00000361127 GeneID:9860 KEGG:hsa:9860 UCSC:uc001edf.1
CTD:9860 GeneCards:GC01P113615 HGNC:HGNC:20889 HPA:HPA015538
MIM:608869 neXtProt:NX_O94898 PharmGKB:PA134905053
InParanoid:O94898 OMA:FPTNHER OrthoDB:EOG41NTKF GenomeRNAi:9860
NextBio:37168 Bgee:O94898 CleanEx:HS_LRIG2 Genevestigator:O94898
GermOnline:ENSG00000198799 Uniprot:O94898
Length = 1065
Score = 238 (88.8 bits), Expect = 3.7e-16, P = 3.7e-16
Identities = 76/282 (26%), Positives = 130/282 (46%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L ++ LS +++ +D AF GL+ L L+ N + + F +L L L N I
Sbjct: 313 LSELDLSYNQLTRLDESAFVGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEIS 372
Query: 137 ---QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ + AF L+ L L L I+ I AF+GL+SLE L L+NN I +I +
Sbjct: 373 WAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAFSQ 432
Query: 194 TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
T L + L+ + CDC L L +WL +++ C+ P L+ +I + + + C
Sbjct: 433 THLKELILNTSSLLCDCHLKWLLQWLVDNNFQHSVNVSCAHPEWLAGQSILNVDLKDFVC 492
Query: 254 E----PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT--WLFDGVPIQNESMSASESHA 307
+ PQI + G NV+L C + ++ ++ W D + + +E+
Sbjct: 493 DDFLKPQIRTHPETIIALRGMNVTLTCTAVSSSDSPMSTVWRKDSEILYDVD---TENFV 549
Query: 308 VYSTEEGTEIKKSELL-IYNSNIDDNGTFVCVAENQAGSTSS 348
Y + G ++ + +L ++N N D G + C+ N GS S
Sbjct: 550 RYWQQAGEALEYTSILHLFNVNFTDEGKYQCIVTNHFGSNYS 591
Score = 176 (67.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 51/157 (32%), Positives = 82/157 (52%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ Q L+ N +K + FQ GL +L+ + + R IS + AF GL N+ +L+ H
Sbjct: 215 PHLQFLELKRNRIKIVEGLTFQ--GLDSLRSLKMQRNGISKLKDGAFFGLNNMEELELEH 272
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L V L +L +S N I++I A++ L L+LS + ++++AFV
Sbjct: 273 NNLTRVNKGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFV 332
Query: 169 GLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
GL LE L L +N++T I+ G + L +DL +N
Sbjct: 333 GLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNN 369
Score = 139 (54.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 51/193 (26%), Positives = 84/193 (43%)
Query: 5 IFLIATIIKIVSA-----CPTSCICKWKGGKQTVECVNKSLIT----VVEGM-DPNTQVL 54
+F+ T + ++ A CP C C+ ++C + L + G+ P+T +L
Sbjct: 25 LFIAQTALLLLPAAGAGLCPAPCSCRIP----LLDCSRRKLPAPSWRALSGLLPPDTAIL 80
Query: 55 DYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
D++ N L N + L ++ Y I +N+ L HN++ +
Sbjct: 81 DFSHNRLSNW-NISLESQTLQEVKMNYNELTEIPYFGEPT----SNITLLSLVHNIIPEI 135
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS-L 173
+ YP+L L LS N I +IKT +F P L L LS I +E F L S L
Sbjct: 136 NAQALQFYPALESLDLSSNIISEIKTSSF-PRMQLKYLNLSNNRITTLEAGCFDNLSSSL 194
Query: 174 EWLKLDNNKITTI 186
+KL+ N+++ I
Sbjct: 195 LVVKLNRNRMSMI 207
Score = 129 (50.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 42/117 (35%), Positives = 57/117 (48%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L L F +GL L+++ L R++ I FR L+NL LD +N +
Sbjct: 316 LDLSYNQLTRLDESAF--VGLSLLERLNLGDNRVTHIADGVFRFLSNLQTLDLRNNEISW 373
Query: 114 V---PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
S+ F SL KL L GN IK I AF L L L+L+ I I++ AF
Sbjct: 374 AIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNNNAIMSIQENAF 430
Score = 123 (48.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 41/133 (30%), Positives = 69/133 (51%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPI 135
L+ + LS IS I + +F + L L+ S+N + T+ + F + S L+ + L+ N +
Sbjct: 146 LESLDLSSNIISEIKTSSFPRM-QLKYLNLSNNRITTLEAGCFDNLSSSLLVVKLNRNRM 204
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPT 194
I F+ L +L LEL + I+++E F GLDSL LK+ N I+ + G+
Sbjct: 205 SMIPPKIFK-LPHLQFLELKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAFFGLN 263
Query: 195 GLHGIDLHHNPWT 207
+ ++L HN T
Sbjct: 264 NMEELELEHNNLT 276
Score = 122 (48.0 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 36 VNKSLITVVEGMD----PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+ ++ I +VEG+ + + L N + L + F GL N++++ L ++ ++
Sbjct: 222 LKRNRIKIVEGLTFQGLDSLRSLKMQRNGISKLKDGAF--FGLNNMEELELEHNNLTRVN 279
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
GL L L S N ++ + D + L +L LS N + ++ AF LS L
Sbjct: 280 KGWLYGLRMLQQLYVSQNAIERISPDAWEFCQRLSELDLSYNQLTRLDESAFVGLSLLER 339
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L + I D F L +L+ L L NN+I+
Sbjct: 340 LNLGDNRVTHIADGVFRFLSNLQTLDLRNNEIS 372
Score = 89 (36.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 22/71 (30%), Positives = 35/71 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
N Q LD N + + + GL +L K+ L +I I KAF GL +L LD ++
Sbjct: 360 NLQTLDLRNNEISWAIEDASEAFAGLTSLTKLILQGNQIKSITKKAFIGLESLEHLDLNN 419
Query: 109 NVLQTVPSDTF 119
N + ++ + F
Sbjct: 420 NAIMSIQENAF 430
Score = 88 (36.0 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 27/111 (24%), Positives = 48/111 (43%)
Query: 245 QLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASE 304
+L+++E+ P + L I+ G L C P +I+W DG A+
Sbjct: 595 KLTVNEM---PSFLKTPMDLTIRTGAMARLECAAEGHPAPQISWQKDG----GTDFPAAR 647
Query: 305 SHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ E I N I+D G + C+A+N AG S+N ++ ++
Sbjct: 648 ERRMHVMPED-----DVFFIANVKIEDMGIYSCMAQNTAGGLSANASLTVL 693
Score = 61 (26.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 16/90 (17%), Positives = 36/90 (40%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ G+ L C P ++ W D P+ +E H + + L+I
Sbjct: 707 VTRGETAVLQCIAGGSPAPRLNWTKDDGPLL-----VTERHFFAAANQ-------LLIIV 754
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ ++D G + C+ N G+ + + ++
Sbjct: 755 DAGLEDAGKYTCIMSNTLGTERGHIYLNVI 784
>ZFIN|ZDB-GENE-041210-129 [details] [associations]
symbol:lrrc4.1 "leucine rich repeat containing 4.1"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041210-129 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
InterPro:IPR026882 PANTHER:PTHR24369:SF9 EMBL:BX855622
UniGene:Dr.114688 UniGene:Dr.159965 Ensembl:ENSDART00000140028
OMA:ILTHASW Uniprot:I7HJH4
Length = 858
Score = 225 (84.3 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 86/327 (26%), Positives = 147/327 (44%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSH-NVLQTVPS 116
N ++++ + F ++ +L ++ L R + I AF GL NL L+ N+ +P+
Sbjct: 155 NPIESIPSYAFNRVP--SLMRLDLGELRKLEYISDGAFEGLVNLKYLNLGMCNIRGEMPN 212
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
F L +L +S N +IK G+F+ LS L L + I +IE AF L SL L
Sbjct: 213 --FTPLVGLEELEISENLFPEIKPGSFRGLSSLKKLWIMNSQIGLIERNAFDDLASLVEL 270
Query: 177 KLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWL-ESTKTPMAIDPICSV 234
L +N ++++ P L + LHHNPW C C + L RWL E T C
Sbjct: 271 NLAHNNLSSLPHDLYTPLKYLVELHLHHNPWNCGCDSLWLARWLREYIPTNSTCCGRCHS 330
Query: 235 PPRLSSVTIKQLSIDE---LACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF 290
P + + +L + + C P I + L I + L C+ +A+ + + WL
Sbjct: 331 PAHMRGRQLVELDRGDTGAMQCSAPFIADAPRDLNISAERVAELKCRTAAM--SAVRWLL 388
Query: 291 DGVPIQNESMSASESHAVYST-EEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSN 349
I ++ + SH + +GT + S +L D G + C+ N AG+++++
Sbjct: 389 PNGTI----LTHASSHPRLTVLNDGT-LNFSNVLA-----GDTGMYTCMVSNAAGNSNAS 438
Query: 350 YTIRIVLKEENVEVVTVFPLEYVLIVS 376
+ + E N ++ F V ++S
Sbjct: 439 AYLNVSAAELNTSNLSYFTTVTVEVLS 465
Score = 214 (80.4 bits), Expect = 6.3e-15, Sum P(2) = 6.3e-15
Identities = 68/210 (32%), Positives = 105/210 (50%)
Query: 5 IFL-IATIIKIVSA-----CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTG 58
+FL + +++V+A CPT C C + K V C + L V G+ T+ L+
Sbjct: 25 LFLMVQACVEVVAAAGPQGCPTDCSCNNQLSK--VVCTRRGLTRVPPGIPSTTRHLNLME 82
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N ++++ + F+ L +L+ + L R I I+ AF GLTNL L+ N L VPS
Sbjct: 83 NAIESVQVDSFRN--LHHLEVLQLGRNAIRQIEVGAFSGLTNLNTLELFDNRLTVVPSGA 140
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEWLK 177
F L +L L NPI+ I + AF + L+ L+L + +E I D AF GL +L++L
Sbjct: 141 FEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELRKLEYISDGAFEGLVNLKYLN 200
Query: 178 LDNNKITTISGS--NILP-TGLHGIDLHHN 204
L + I G N P GL +++ N
Sbjct: 201 LG---MCNIRGEMPNFTPLVGLEELEISEN 227
Score = 61 (26.5 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 565 TPEKFMDRDGYPVDFGLPKVPTHFPALVPATAY--YRTLPHRRHTAANPNNRYSR-EAEF 621
TP+ D + ++G+PK T + P Y ++T + YS +AE+
Sbjct: 714 TPKP--DFSPFKTEYGVPKSKTDYSMPKPKPDYSPFKTDSFFKPDYIAFKAEYSPLKAEY 771
Query: 622 LSRSSQPASYEH-YAPADVRYN 642
+SR P Y+ Y+P +V Y+
Sbjct: 772 VSRDFSPHKYKKDYSPHNVDYS 793
>UNIPROTKB|Q8IW52 [details] [associations]
symbol:SLITRK4 "SLIT and NTRK-like protein 4" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AL080239 EMBL:CH471170 EMBL:BC040986
EMBL:AL713693 EMBL:AK057619 IPI:IPI00217146 RefSeq:NP_001171678.1
RefSeq:NP_001171679.1 RefSeq:NP_775101.1 UniGene:Hs.272284
ProteinModelPortal:Q8IW52 SMR:Q8IW52 PhosphoSite:Q8IW52
DMDM:46396931 PaxDb:Q8IW52 PRIDE:Q8IW52 DNASU:139065
Ensembl:ENST00000338017 Ensembl:ENST00000356928
Ensembl:ENST00000381779 GeneID:139065 KEGG:hsa:139065
UCSC:uc004fbx.3 CTD:139065 GeneCards:GC0XM142715 HGNC:HGNC:23502
HPA:HPA001039 MIM:300562 neXtProt:NX_Q8IW52 PharmGKB:PA134926932
InParanoid:Q8IW52 OMA:TVFVAFC OrthoDB:EOG4VHK5S PhylomeDB:Q8IW52
GenomeRNAi:139065 NextBio:83882 Bgee:Q8IW52 CleanEx:HS_SLITRK4
Genevestigator:Q8IW52 GermOnline:ENSG00000179542 Uniprot:Q8IW52
Length = 837
Score = 236 (88.1 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 72/255 (28%), Positives = 120/255 (47%)
Query: 10 TIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLH 65
T + ++ CP C CK +V C K++ ++ E + P N + L GN++K +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPLNAKKLHVNGNSIKDVD 393
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F ++L ++L +I+VI F LTNL L + N ++ + + F +L
Sbjct: 394 VSDFTDFEGLDL--LHLGSNQITVIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNL 451
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L N IK+I G F + L L L+ ++ + F G L L L NNK
Sbjct: 452 QYLYLEYNLIKEISAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMY 510
Query: 186 ISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVT 242
+ S +L L IDL NPW C C L+ L+ W+E + + + C P + +++
Sbjct: 511 LPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWVEKLSDGIVVKELKCETPVQFANIE 570
Query: 243 IKQLSIDELACEPQI 257
+K L +E+ C P++
Sbjct: 571 LKSLK-NEILC-PKL 583
Score = 203 (76.5 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 81/280 (28%), Positives = 122/280 (43%)
Query: 1 MMYWIFLI-ATIIKIVSA--------CPTSCICKWKGGKQTVECVNKSLITVVEGMDP-- 49
M W+FLI + +I +A C C C V C S+ + P
Sbjct: 1 MFLWLFLILSALISSTNADSDISVEICNV-CSCVSVENVLYVNCEKVSVYRPNQLKPPWS 59
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N L++ N L L+ F + + ++L ++ I+ AF GL+ L L ++N
Sbjct: 60 NFYHLNFQNNFLNILYPNTF--LNFSHAVSLHLGNNKLQNIEGGAFLGLSALKQLHLNNN 117
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+ + +DTF +L L N IK I+ GAF L L L L+ I + D F
Sbjct: 118 ELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF-R 176
Query: 170 LDSLEWLKLDNNKITTISGSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA 227
SL L + N+I + +L G + + L NPW C C L+ L+ WLE+ +
Sbjct: 177 FASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNIY 236
Query: 228 I-DPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEI 266
I + IC P L +K+ + EL C P T S F + I
Sbjct: 237 IGEAICETPSDLYGRLLKETNKQEL-C-PMGTGSDFDVRI 274
>UNIPROTKB|E1C0J7 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 EMBL:AADN02019209
IPI:IPI00576786 ProteinModelPortal:E1C0J7
Ensembl:ENSGALT00000009463 Uniprot:E1C0J7
Length = 1411
Score = 239 (89.2 bits), Expect = 4.2e-16, P = 4.2e-16
Identities = 79/270 (29%), Positives = 118/270 (43%)
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPL 146
I I AFR L NL L ++N ++ + +F D +L L L N I+ I+ AF L
Sbjct: 62 IREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGL 121
Query: 147 SYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNP 205
L L L +E +E F L LE L L NNKI+ I G+ L + L N
Sbjct: 122 RSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNA 181
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPI--CSVPPRLSSVTIKQLSIDELACE-PQITPSTF 262
CDC L+ L L+ +I C P L +I L+ E CE P+IT
Sbjct: 182 LLCDCDLLWLAELLQKYAELGSIQTAATCEAPRELHGRSIVTLTAQEFNCERPRITSEPH 241
Query: 263 YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSEL 322
+++ G V C+ P+ I WL + N + + + + ++GT L
Sbjct: 242 DVDVLLGNTVYFTCRAEGNPKPAIIWLHN-----NNEIDMKDDNRLNLLQDGT------L 290
Query: 323 LIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
+I N+ D G + C+A+N AG + +
Sbjct: 291 MIQNTKESDKGVYQCMAKNIAGEVKTQEVV 320
Score = 168 (64.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 52/179 (29%), Positives = 87/179 (48%)
Query: 6 FLIATIIKIVS-ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
FL ++ S +CP C+C + TV C++ L T+ + + P T +LD N+++ +
Sbjct: 11 FLCFLLLPASSRSCPPRCLCF----RTTVRCMHLMLETIPD-IPPQTSILDLRFNHIREI 65
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F++ L NL + L+ +I I ++F L NL L N +Q++ F S
Sbjct: 66 QPGAFRR--LKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRS 123
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L N ++ ++ F L L L L I I F L+SL+ L+LD+N +
Sbjct: 124 LEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 139 (54.0 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 47/149 (31%), Positives = 66/149 (44%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N +K + F+ L NL+ +YL + I I AF GL +L L N
Sbjct: 77 NTLLLN--NNQIKHIVRRSFED--LENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFN 132
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+T+ +TF D P L +L L N I +I G F L L L L + + D +
Sbjct: 133 SLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL--LCDCDLLW 190
Query: 170 LDSLEWLKLDNNKITTISGSNILPTGLHG 198
L L + I T + P LHG
Sbjct: 191 LAELLQKYAELGSIQTAATCEA-PRELHG 218
Score = 118 (46.6 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 38/108 (35%), Positives = 55/108 (50%)
Query: 99 TNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG 158
T+++DL F+H ++ + F +L L L+ N IK I +F+ L L L L K
Sbjct: 52 TSILDLRFNH--IREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNE 109
Query: 159 IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHN 204
I+ I+ AF GL SLE L L N + T+ LP L + LH+N
Sbjct: 110 IQSIQQHAFHGLRSLEQLYLHFNSLETLEPETFSDLPK-LERLFLHNN 156
Score = 108 (43.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 31/121 (25%), Positives = 60/121 (49%)
Query: 238 LSSVTIKQLSIDELACEPQITPSTFY----LEIQEGKNVSLLCKVSAIPEAKITWLFDGV 293
+S++ ++ L + +LA P++ P + + + G++V++ C P ITW+ +G+
Sbjct: 494 ISAIGVRTLPV-QLAVTPRVIPVFLHPPQDVVAETGQDVAITCAAQGDPRPTITWVKEGI 552
Query: 294 PIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIR 353
I +ES + +++GT L I + + D G + C+A N G TSS +
Sbjct: 553 QI-------TESGKFHVSQDGT------LSIQDLGVADQGRYECIARNPFGFTSSAMQLT 599
Query: 354 I 354
I
Sbjct: 600 I 600
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 108 HNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
H +L+T+P P S++ L N I++I+ GAF+ L L TL L+ I+ I +F
Sbjct: 39 HLMLETIPD--IPPQTSILDLRF--NHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSF 94
Query: 168 VGLDSLEWLKLDNNKITTI 186
L++L++L L N+I +I
Sbjct: 95 EDLENLKYLYLYKNEIQSI 113
Score = 81 (33.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
E+ G++V+L C VS P +I+W L G P+ + A T G L
Sbjct: 340 EVLVGESVTLECGVSGHPHPRISWTLGTGSPLPQDPRFAI-------TSSGG------LF 386
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
I N D G + C A N GS + T RI++++
Sbjct: 387 IQNVTFSDQGQYNCNASNTEGSIQA--TARIIVQD 419
Score = 46 (21.3 bits), Expect = 7.1e-08, Sum P(2) = 7.1e-08
Identities = 20/80 (25%), Positives = 32/80 (40%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG++V C P I W G P+ + + H++ ST GT L +
Sbjct: 432 VTEGQSVDFPCTAEGHPPPVIAWTRAAGGPLPS-----NRRHSILST--GT------LRV 478
Query: 325 YNSNIDDNGTFVCVAENQAG 344
+ D G + C A + G
Sbjct: 479 MRVALHDQGQYECHAISAIG 498
Score = 39 (18.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 285 KITWLFDG-VPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAEN 341
++ L DG + IQN S + + E+K E+++ TFV +N
Sbjct: 281 RLNLLQDGTLMIQNTKESDKGVYQCMAKNIAGEVKTQEVVLRYFGTPSKPTFVIQPQN 338
>UNIPROTKB|E1C0J1 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004601 "peroxidase activity" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] InterPro:IPR001611 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF03098 PRINTS:PR00457 PROSITE:PS50292 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 SUPFAM:SSF48113 Gene3D:1.10.640.10 InterPro:IPR022409
SMART:SM00089 GeneTree:ENSGT00550000074325 OMA:GGRYECQ
EMBL:AADN02019209 IPI:IPI00599639 ProteinModelPortal:E1C0J1
Ensembl:ENSGALT00000009466 Uniprot:E1C0J1
Length = 1424
Score = 239 (89.2 bits), Expect = 4.3e-16, P = 4.3e-16
Identities = 79/270 (29%), Positives = 118/270 (43%)
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPL 146
I I AFR L NL L ++N ++ + +F D +L L L N I+ I+ AF L
Sbjct: 62 IREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGL 121
Query: 147 SYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNP 205
L L L +E +E F L LE L L NNKI+ I G+ L + L N
Sbjct: 122 RSLEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNA 181
Query: 206 WTCDCLLIGLRRWLESTKTPMAIDPI--CSVPPRLSSVTIKQLSIDELACE-PQITPSTF 262
CDC L+ L L+ +I C P L +I L+ E CE P+IT
Sbjct: 182 LLCDCDLLWLAELLQKYAELGSIQTAATCEAPRELHGRSIVTLTAQEFNCERPRITSEPH 241
Query: 263 YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSEL 322
+++ G V C+ P+ I WL + N + + + + ++GT L
Sbjct: 242 DVDVLLGNTVYFTCRAEGNPKPAIIWLHN-----NNEIDMKDDNRLNLLQDGT------L 290
Query: 323 LIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
+I N+ D G + C+A+N AG + +
Sbjct: 291 MIQNTKESDKGVYQCMAKNIAGEVKTQEVV 320
Score = 168 (64.2 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 52/179 (29%), Positives = 87/179 (48%)
Query: 6 FLIATIIKIVS-ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
FL ++ S +CP C+C + TV C++ L T+ + + P T +LD N+++ +
Sbjct: 11 FLCFLLLPASSRSCPPRCLCF----RTTVRCMHLMLETIPD-IPPQTSILDLRFNHIREI 65
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F++ L NL + L+ +I I ++F L NL L N +Q++ F S
Sbjct: 66 QPGAFRR--LKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNEIQSIQQHAFHGLRS 123
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L +L L N ++ ++ F L L L L I I F L+SL+ L+LD+N +
Sbjct: 124 LEQLYLHFNSLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL 182
Score = 139 (54.0 bits), Expect = 3.6e-11, Sum P(2) = 3.6e-11
Identities = 47/149 (31%), Positives = 66/149 (44%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N +K + F+ L NL+ +YL + I I AF GL +L L N
Sbjct: 77 NTLLLN--NNQIKHIVRRSFED--LENLKYLYLYKNEIQSIQQHAFHGLRSLEQLYLHFN 132
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+T+ +TF D P L +L L N I +I G F L L L L + + D +
Sbjct: 133 SLETLEPETFSDLPKLERLFLHNNKISRIHPGTFSQLESLKRLRLDSNAL--LCDCDLLW 190
Query: 170 LDSLEWLKLDNNKITTISGSNILPTGLHG 198
L L + I T + P LHG
Sbjct: 191 LAELLQKYAELGSIQTAATCEA-PRELHG 218
Score = 118 (46.6 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 38/108 (35%), Positives = 55/108 (50%)
Query: 99 TNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG 158
T+++DL F+H ++ + F +L L L+ N IK I +F+ L L L L K
Sbjct: 52 TSILDLRFNH--IREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSFEDLENLKYLYLYKNE 109
Query: 159 IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHN 204
I+ I+ AF GL SLE L L N + T+ LP L + LH+N
Sbjct: 110 IQSIQQHAFHGLRSLEQLYLHFNSLETLEPETFSDLPK-LERLFLHNN 156
Score = 108 (43.1 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 31/121 (25%), Positives = 60/121 (49%)
Query: 238 LSSVTIKQLSIDELACEPQITPSTFY----LEIQEGKNVSLLCKVSAIPEAKITWLFDGV 293
+S++ ++ L + +LA P++ P + + + G++V++ C P ITW+ +G+
Sbjct: 494 ISAIGVRTLPV-QLAVTPRVIPVFLHPPQDVVAETGQDVAITCAAQGDPRPTITWVKEGI 552
Query: 294 PIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIR 353
I +ES + +++GT L I + + D G + C+A N G TSS +
Sbjct: 553 QI-------TESGKFHVSQDGT------LSIQDLGVADQGRYECIARNPFGFTSSAMQLT 599
Query: 354 I 354
I
Sbjct: 600 I 600
Score = 96 (38.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 108 HNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAF 167
H +L+T+P P S++ L N I++I+ GAF+ L L TL L+ I+ I +F
Sbjct: 39 HLMLETIPD--IPPQTSILDLRF--NHIREIQPGAFRRLKNLNTLLLNNNQIKHIVRRSF 94
Query: 168 VGLDSLEWLKLDNNKITTI 186
L++L++L L N+I +I
Sbjct: 95 EDLENLKYLYLYKNEIQSI 113
Score = 81 (33.6 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL 323
E+ G++V+L C VS P +I+W L G P+ + A T G L
Sbjct: 340 EVLVGESVTLECGVSGHPHPRISWTLGTGSPLPQDPRFAI-------TSSGG------LF 386
Query: 324 IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
I N D G + C A N GS + T RI++++
Sbjct: 387 IQNVTFSDQGQYNCNASNTEGSIQA--TARIIVQD 419
Score = 46 (21.3 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 20/80 (25%), Positives = 32/80 (40%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
+ EG++V C P I W G P+ + + H++ ST GT L +
Sbjct: 432 VTEGQSVDFPCTAEGHPPPVIAWTRAAGGPLPS-----NRRHSILST--GT------LRV 478
Query: 325 YNSNIDDNGTFVCVAENQAG 344
+ D G + C A + G
Sbjct: 479 MRVALHDQGQYECHAISAIG 498
Score = 39 (18.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/58 (24%), Positives = 24/58 (41%)
Query: 285 KITWLFDG-VPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAEN 341
++ L DG + IQN S + + E+K E+++ TFV +N
Sbjct: 281 RLNLLQDGTLMIQNTKESDKGVYQCMAKNIAGEVKTQEVVLRYFGTPSKPTFVIQPQN 338
>UNIPROTKB|Q6WRI0 [details] [associations]
symbol:IGSF10 "Immunoglobulin superfamily member 10"
species:9606 "Homo sapiens" [GO:0001503 "ossification"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] InterPro:IPR007110
PROSITE:PS50835 GO:GO:0007275 GO:GO:0005576 GO:GO:0030154
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042246
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0001503 HSSP:Q9BZR6 EMBL:AY273815 EMBL:AK093069 EMBL:AK098838
EMBL:BC031063 IPI:IPI00183913 IPI:IPI00478293 IPI:IPI00795608
RefSeq:NP_001171616.1 RefSeq:NP_001171617.1 RefSeq:NP_849144.2
UniGene:Hs.741587 ProteinModelPortal:Q6WRI0 SMR:Q6WRI0
STRING:Q6WRI0 PhosphoSite:Q6WRI0 DMDM:74749492 PaxDb:Q6WRI0
PRIDE:Q6WRI0 Ensembl:ENST00000282466 GeneID:285313 KEGG:hsa:285313
UCSC:uc011bob.2 UCSC:uc011boc.2 UCSC:uc011bod.2 CTD:285313
GeneCards:GC03M151143 HGNC:HGNC:26384 HPA:HPA012921
neXtProt:NX_Q6WRI0 PharmGKB:PA134900760 eggNOG:NOG239806
HOGENOM:HOG000113014 HOVERGEN:HBG107995 InParanoid:Q6WRI0
OMA:PYVSEDG OrthoDB:EOG45MN4F PhylomeDB:Q6WRI0 GenomeRNAi:285313
NextBio:95425 ArrayExpress:Q6WRI0 Bgee:Q6WRI0 CleanEx:HS_IGSF10
Genevestigator:Q6WRI0 Uniprot:Q6WRI0
Length = 2623
Score = 200 (75.5 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 62/214 (28%), Positives = 96/214 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C V C + L ++ + + PN + ++ N+L L F GL
Sbjct: 28 ACPRRCACYMP---TEVHCTFRYLTSIPDSIPPNVERINLGYNSLVRLMETDFS--GLTK 82
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+ + L I I K F L L L S+N ++ + DTF SL +L + N I+
Sbjct: 83 LELLMLHSNGIHTIPDKTFSDLQALQVLKMSYNKVRKLQKDTFYGLRSLTRLHMDHNNIE 142
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE--------WLKLDNNKITTISG 188
I F L++L + L + + FV L L+ +L L +N +T++
Sbjct: 143 FINPEVFYGLNFLRLVHLEGNQLTKLHPDTFVSLSYLQIFKISFIKFLYLSDNFLTSLPQ 202
Query: 189 SNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLE 220
+ +P L + LH NPWTCDC L L W++
Sbjct: 203 EMVSYMPD-LDSLYLHGNPWTCDCHLKWLSDWIQ 235
Score = 110 (43.8 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 231 ICSVPPRLSSVTIKQLSIDELACEPQITPS-TFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+CS L +++ ++ P+I T + + G V L C+ P +TW+
Sbjct: 1722 LCSAS-NLFGTDHLHVTLSVVSYPPRILERRTKEITVHSGSTVELKCRAEGRPSPTVTWI 1780
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSN 349
+ +ES S V T +GT L+++N +I D G + CVA N G S
Sbjct: 1781 LANQTVVSESSQGSRQAVV--TVDGT------LVLHNLSIYDRGFYKCVASNPGGQDSLL 1832
Query: 350 YTIRIV 355
I+++
Sbjct: 1833 VKIQVI 1838
Score = 99 (39.9 bits), Expect = 6.0e-15, Sum P(3) = 6.0e-15
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 229 DPICSVPPRLSSVTIKQLSIDELACEPQITPST-FYLEIQEGKNVSLLCKVSAIPEAKIT 287
D C L +K + + + P+I S I+ G L C+V+ P+ KI
Sbjct: 2116 DYTCYAQNTLGKDEMK-VHLTVITAAPRIRQSNKTNKRIKAGDTAVLDCEVTGDPKPKIF 2174
Query: 288 WLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
WL +P N+ +S S + I K +LL D+G +VCVA N +G +
Sbjct: 2175 WL---LP-SNDMISFSIDRYTFHANGSLTINKVKLL-------DSGEYVCVARNPSGDDT 2223
Query: 348 SNYTIRIVLK 357
Y + +V K
Sbjct: 2224 KMYKLDVVSK 2233
Score = 95 (38.5 bits), Expect = 1.5e-14, Sum P(3) = 1.5e-14
Identities = 25/95 (26%), Positives = 41/95 (43%)
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKS 320
F ++ GK+ + CK S P +I+W L DG I N +M A +S + T T
Sbjct: 2046 FRKQVLHGKDFQVDCKASGSPVPEISWSLPDGTMINN-AMQADDSG--HRTRRYTLFNNG 2102
Query: 321 ELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
L + + G + C A+N G + ++
Sbjct: 2103 TLYFNKVGVAEEGDYTCYAQNTLGKDEMKVHLTVI 2137
Score = 80 (33.2 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 26/106 (24%), Positives = 44/106 (41%)
Query: 240 SVTIKQLSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNE 298
SV + QL + E+ P P + Q GK+ +L C V P +I W+ +P
Sbjct: 2322 SVLVVQLEVLEMLRRPTFRNPFNEKIVAQLGKSTALNCSVDGNPPPEIIWI---LPNGTR 2378
Query: 299 SMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAG 344
+ +S+ G+ +I + +D G + C A N+ G
Sbjct: 2379 FSNGPQSYQYLIASNGS------FIISKTTREDAGKYRCAARNKVG 2418
Score = 78 (32.5 bits), Expect = 8.2e-13, Sum P(3) = 8.2e-13
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 251 LACEPQIT--PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAV 308
+A P+IT P + + G L C +P+ +ITW +P + +S +
Sbjct: 2524 VAYPPRITNRPPRSIVT-RTGAAFQLHCVALGVPKPEITW---EMP-DHSLLSTASKERT 2578
Query: 309 YSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ +E+ ++ + L+I N D+G + C A+N GS + I+++
Sbjct: 2579 HGSEQ-LHLQGT-LVIQNPQTSDSGIYKCTAKNPLGSDYAATYIQVI 2623
Score = 77 (32.2 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 30/115 (26%), Positives = 53/115 (46%)
Query: 243 IKQLSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESM 300
I++L I E+ +P I T + ++ G+++SL C IP+ I W G + +
Sbjct: 2420 IEKLVILEIGQKPVILTYAPGTVKGISGESLSLHCVSDGIPKPNIKWTMPSGYVVDRPQI 2479
Query: 301 SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ + ++ + GT + K E Y D G ++C A+N G T + IV
Sbjct: 2480 NGK--YILH--DNGTLVIK-EATAY-----DRGNYICKAQNSVGHTLITVPVMIV 2524
Score = 75 (31.5 bits), Expect = 1.7e-12, Sum P(3) = 1.7e-12
Identities = 33/133 (24%), Positives = 56/133 (42%)
Query: 231 ICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQE-GKNVSLLCKVSAIPEAKITW- 288
+ S P S+ +K I +A P I + + G+++ L C P+ + W
Sbjct: 1821 VASNPGGQDSLLVK---IQVIAAPPVILEQRRQVIVGTWGESLKLPCTAKGTPQPSVYWV 1877
Query: 289 LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSS 348
L DG ++ + S+ ++ GT L I N D GT+ C+A + ST S
Sbjct: 1878 LSDGTEVKPLQFTNSK---LFLFSNGT------LYIRNLASSDRGTYECIATS---STGS 1925
Query: 349 NYTIRIVLKEENV 361
+ ++ EE V
Sbjct: 1926 ERRVVMLTMEERV 1938
Score = 71 (30.1 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 24/89 (26%), Positives = 39/89 (43%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ + L C + IP+A I+W+ +P N +S V + GT L I
Sbjct: 588 GETLDLPCHSTGIPDASISWV---IPGNNVLYQSSRDKKVLNN--GT------LRILQVT 636
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIVLK 357
D G + CVA N +G + + + +K
Sbjct: 637 PKDQGYYRCVAANPSGVDFLIFQVSVKMK 665
Score = 71 (30.1 bits), Expect = 4.2e-12, Sum P(3) = 4.2e-12
Identities = 25/121 (20%), Positives = 47/121 (38%)
Query: 243 IKQLSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
+ L+++E P+I S E+ G + L C + P+ +I W + ++
Sbjct: 1929 VVMLTMEERVTSPRIEAASQKRTEVNFGDKLLLNCSATGEPKPQIMWRLPSKAVVDQQHR 1988
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENV 361
VY L I + D+G ++CVA N+ G + + LK +
Sbjct: 1989 VGSWIHVYPN--------GSLFIGSVTEKDSGVYLCVARNKMGDDLILMHVSLRLKPAKI 2040
Query: 362 E 362
+
Sbjct: 2041 D 2041
Score = 67 (28.6 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 19/71 (26%), Positives = 31/71 (43%)
Query: 276 CKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTF 335
C+ P ++ W+ +P N ++A Y T K L I N + D+ F
Sbjct: 2261 CRAEGTPSPEVMWI---MP-DNIFLTAP-----YYGSRITVHKNGTLEIRNVRLSDSADF 2311
Query: 336 VCVAENQAGST 346
+CVA N+ G +
Sbjct: 2312 ICVARNEGGES 2322
Score = 61 (26.5 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 23/90 (25%), Positives = 37/90 (41%)
Query: 269 GKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEI--KKSELLIY 325
G V L C P + WL DG S+ A Y +E+G + K +L +
Sbjct: 490 GGTVGLNCPGQGDPTPHVDWLLADG----------SKVRAPYVSEDGRILIDKSGKLELQ 539
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
++ D G + C++ N + Y I +V
Sbjct: 540 MADSFDTGVYHCISSNYDDADILTYRITVV 569
Score = 55 (24.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 30/125 (24%), Positives = 45/125 (36%)
Query: 236 PRLSSVTIKQLSIDELAC----EPQITPS-TFYLEIQEGKNVSLLCKVSAIPEAKITWLF 290
P + T K L D L+ +P+I I + L C+ P I W
Sbjct: 1625 PVQEATTSKLLPFDSLSRYIFEKPRIVGGKAASFTIPANSDAFLPCEAVGNPLPTIHWT- 1683
Query: 291 DGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNY 350
VP + ++ V GT L I I D G ++C A N G+ +
Sbjct: 1684 -RVPSGLDLSKRKQNSRVQVLPNGT------LSIQRVEIQDRGQYLCSASNLFGTDHLHV 1736
Query: 351 TIRIV 355
T+ +V
Sbjct: 1737 TLSVV 1741
Score = 47 (21.6 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 693 SSADEQPSTSNPEKSNEN-----KSEGFQAKRHMIDSLLKNRDVKV 733
SSA + P NP S + FQ + IDS LK++ + +
Sbjct: 250 SSAQQCPLCMNPRTSKGKPLAMVSAAAFQCAKPTIDSSLKSKSLTI 295
Score = 38 (18.4 bits), Expect = 4.5e-16, Sum P(3) = 4.5e-16
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 220 ESTKTPMAIDPICSVPPRLSS 240
+ST T AI ++PP LSS
Sbjct: 1448 QSTTTRKAIIRHSTIPPFLSS 1468
>UNIPROTKB|F1RQ64 [details] [associations]
symbol:LOC100525800 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 GeneTree:ENSGT00680000099775
OMA:TVFVAFC EMBL:CU928352 RefSeq:XP_003135482.1
Ensembl:ENSSSCT00000023710 Ensembl:ENSSSCT00000034435
GeneID:100525800 KEGG:ssc:100525800 Uniprot:F1RQ64
Length = 838
Score = 235 (87.8 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 72/255 (28%), Positives = 120/255 (47%)
Query: 10 TIIKIVSACPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLH 65
T + ++ CP C CK +V C K++ ++ E + P N + L GN++K +
Sbjct: 334 TRVPPLTPCPAPCFCKTHPSDLGLSVNCQEKNIQSMSELIPKPFNAKKLHVNGNSIKDVD 393
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
F + ++L ++L +I+ I F LTNL L + N ++ + + F +L
Sbjct: 394 ISDFAEFEGLDL--LHLGSNQIAAIKGDVFHNLTNLRRLYLNGNQIERLYPEIFSGLHNL 451
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L N IK+I G F + L L L+ ++ + F G L L L NNK
Sbjct: 452 QYLYLEYNLIKEILAGTFDSMPNLQLLYLNNNLLKSLPVYIFSGAP-LARLNLRNNKFMY 510
Query: 186 ISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVT 242
+ S +L L IDL NPW C C L+ L+ WLE + + + C P + +++
Sbjct: 511 LPVSGVLDQLQSLTQIDLEGNPWDCTCDLVALKLWLEKLNDGIVVKELRCETPVQFANIE 570
Query: 243 IKQLSIDELACEPQI 257
+K L +E+ C P++
Sbjct: 571 LKSLK-NEILC-PKL 583
Score = 201 (75.8 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 84/281 (29%), Positives = 122/281 (43%)
Query: 1 MMYWIFLI-ATIIKIVSA--------CPTSCICKWKGGKQTVECVNKSLITVVEGMDP-- 49
M W+FLI + +I +A C C C V C S+ + P
Sbjct: 1 MFLWLFLILSALISSTNADSDISVEICNV-CSCVSVENVLYVNCEKVSVYRPNQLKPPWS 59
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMG-LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
N L++ N L L+ F V+LQ L ++ I+ AF GL+ L L ++
Sbjct: 60 NFYHLNFQNNFLNILYPNTFLNFSHAVSLQ---LGNNKLQNIEGGAFLGLSALKQLHLNN 116
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L+ + +DTF +L L N IK I+ GAF L L L L+ I + D F
Sbjct: 117 NELKILRADTFLGIENLEYLQADYNLIKYIERGAFNKLHKLKVLILNDNLISFLPDNIF- 175
Query: 169 GLDSLEWLKLDNNKITTISGSNILP-TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPM 226
SL L + N+I + +L G + + L NPW C C L+ L+ WLE+ +
Sbjct: 176 RFASLTHLDIRGNRIQKLPYIGVLEHIGRVVELQLEDNPWNCSCDLLPLKAWLENMPYNI 235
Query: 227 AI-DPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEI 266
I + IC P L +K+ + EL C P T S F + I
Sbjct: 236 YIGEAICETPSDLYGRLLKETNKQEL-C-PMGTGSDFDVRI 274
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 226 (84.6 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 58/187 (31%), Positives = 93/187 (49%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N +L N L+ L F+ G +L+ +Y+S +S I + + NL L N
Sbjct: 152 NLFILQLNNNKLRELQPGTFK--GAKDLRWLYMSGNELSSIQPGSLDEVENLAILTLDQN 209
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS-YLVTLELSKCGIEVIEDAAFV 168
L T P + +L LS NP+ I AF+ Y+ L L+ +E +AAF
Sbjct: 210 NLSTYPLLAMSKLRVVEELNLSKNPLSLIPDHAFRSFGRYMEKLHLNDMSLEKFSNAAFE 269
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI 228
G+ +L+ L L+NNK+ ++ S T + I L +NPW+C C L LR+W+++T+
Sbjct: 270 GVTALKSLHLENNKLRSLPNSLEFST-IQNITLFNNPWSCTCPLTNLRKWMDTTRNRP-- 326
Query: 229 DPICSVP 235
D +C+ P
Sbjct: 327 DAVCASP 333
Score = 219 (82.2 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 68/231 (29%), Positives = 105/231 (45%)
Query: 6 FLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH 65
F T + CP+ C C G Q V C N L + + T++L+ NNL L
Sbjct: 15 FCAHTAFAAPTQCPSQCHCH--GDLQHVICDNVGLKKIPR-ISEATRLLNLQRNNLGNLP 71
Query: 66 NEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F +M GL++L +L C+I + +AF+GL L+ L S N + T+ F D
Sbjct: 72 TGGFSEMKGLISL---HLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKPGAFEDLTE 128
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L GN I + G F P+ L L+L+ + ++ F G L WL + N+++
Sbjct: 129 LTYLYLDGNQITSLPKGIFSPMINLFILQLNNNKLRELQPGTFKGAKDLRWLYMSGNELS 188
Query: 185 TIS-GSNILPTGLHGIDLHHNPW-TCDCLLIGLRRWLES---TKTPMAIDP 230
+I GS L + L N T L + R +E +K P+++ P
Sbjct: 189 SIQPGSLDEVENLAILTLDQNNLSTYPLLAMSKLRVVEELNLSKNPLSLIP 239
>ZFIN|ZDB-GENE-080723-57 [details] [associations]
symbol:lingo2 "leucine rich repeat and Ig domain
containing 2" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-080723-57 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101682 HOVERGEN:HBG057546 CTD:158038
EMBL:CR788317 IPI:IPI00911397 RefSeq:NP_001139054.1
UniGene:Dr.111487 Ensembl:ENSDART00000102279 GeneID:564052
KEGG:dre:564052 OMA:STAMGCL NextBio:20885199 Uniprot:B8JIN1
Length = 607
Score = 232 (86.7 bits), Expect = 6.4e-16, P = 6.4e-16
Identities = 79/294 (26%), Positives = 130/294 (44%)
Query: 73 GLVNLQKIYLSRCRI-SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
GL L+ + + R + + A +GL NL L +H L +VP T Y L L LS
Sbjct: 222 GLPRLKHLEVDRWPLLEGFPTSALQGL-NLSTLSITHTNLTSVPVVTNLLY--LTHLNLS 278
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
+ I+ + G + + L L + + + +E AF G SL L L N++ T+ S +
Sbjct: 279 YSRIRVLPAGWLRGMDRLEVLRVRQANLLSVEPQAFQGASSLRILDLCYNRLATLERS-V 337
Query: 192 LPT--GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA---IDPICSVPPRLSSVTIKQL 246
P L + + NP CDC L RWL P+ + P CS P L+ ++ L
Sbjct: 338 FPVTEALQTLLIGQNPLVCDCRL----RWLLERTPPLLYGDVQPECSAPAPLAGKPLRDL 393
Query: 247 SIDELA----C-EPQITPSTFY-LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESM 300
+++ C +P++ Y + +EG+ L C P ++WL P++
Sbjct: 394 VEAQISRYVICTKPRVISMASYPAQAEEGQRAWLYCSADGAPPPSVSWL---TPLRRHIT 450
Query: 301 SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
+ S V T E + +E D+G +VCVA N AG+ + + T+ +
Sbjct: 451 TKSTGRVVVHTNGSLEFRMAEP-------QDSGMYVCVASNPAGNATLSVTLAV 497
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 53/183 (28%), Positives = 82/183 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
ACP C C ++V C + L V EG+ T+ LD + N L+ + + F + L
Sbjct: 26 ACPARCECSVP--TRSVSCHRRRLAQVPEGIPIETRSLDLSKNRLRIVTPQNFSSLLL-- 81
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+++ LS +S ++ +FR L L N L +P L L +S N +
Sbjct: 82 LEELDLSNNLLSSVEPNSFRAQPRLRSLRLRSNQLTLLPRGALAGLSELTLLDVSQNRLV 141
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGL 196
+ F+ L LELS + I AF GL SL L L ++T+ ++ L L
Sbjct: 142 ILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRSLTLQRCNLSTVP-THAL-AHL 199
Query: 197 HGI 199
HG+
Sbjct: 200 HGL 202
>UNIPROTKB|Q9BZR6 [details] [associations]
symbol:RTN4R "Reticulon-4 receptor" species:9606 "Homo
sapiens" [GO:0031225 "anchored to membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0004872 "receptor activity"
evidence=NAS] [GO:0016020 "membrane" evidence=NAS] [GO:0007409
"axonogenesis" evidence=NAS] [GO:0005886 "plasma membrane"
evidence=TAS] [GO:0048011 "neurotrophin TRK receptor signaling
pathway" evidence=TAS] [GO:0050770 "regulation of axonogenesis"
evidence=TAS] [GO:0050771 "negative regulation of axonogenesis"
evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
Reactome:REACT_111102 GO:GO:0048011
Pathway_Interaction_DB:p75ntrpathway GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 GO:GO:0007409 EMBL:CH471176
InterPro:IPR000372 SMART:SM00013 GO:GO:0050771 HOGENOM:HOG000116109
HOVERGEN:HBG063707 EMBL:AF283463 EMBL:AL834449 EMBL:AY358297
EMBL:CR456360 EMBL:AC058790 EMBL:AC007663 EMBL:BC011787
IPI:IPI00289204 RefSeq:NP_075380.1 UniGene:Hs.30868 PDB:1OZN
PDB:1P8T PDBsum:1OZN PDBsum:1P8T ProteinModelPortal:Q9BZR6
SMR:Q9BZR6 IntAct:Q9BZR6 STRING:Q9BZR6 DMDM:25453267 PRIDE:Q9BZR6
DNASU:65078 Ensembl:ENST00000043402 GeneID:65078 KEGG:hsa:65078
UCSC:uc002zru.3 CTD:65078 GeneCards:GC22M020234 HGNC:HGNC:18601
HPA:CAB012443 MIM:605566 neXtProt:NX_Q9BZR6 PharmGKB:PA38600
InParanoid:Q9BZR6 KO:K16659 PhylomeDB:Q9BZR6
EvolutionaryTrace:Q9BZR6 GenomeRNAi:65078 NextBio:67268 Bgee:Q9BZR6
CleanEx:HS_RTN4R Genevestigator:Q9BZR6 GermOnline:ENSG00000040608
Uniprot:Q9BZR6
Length = 473
Score = 229 (85.7 bits), Expect = 7.4e-16, P = 7.4e-16
Identities = 65/200 (32%), Positives = 96/200 (48%)
Query: 54 LDYTGN-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD + N L+++ F GL L ++L RC + + FRGL L L N LQ
Sbjct: 110 LDLSDNAQLRSVDPATFH--GLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ 167
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+P DTF D +L L L GN I + AF+ L L L L + + + AF L
Sbjct: 168 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGR 227
Query: 173 LEWLKLDNNKITTISGSNILPT-GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L N ++ + + P L + L+ NPW CDC L WL+ + + P
Sbjct: 228 LMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP- 286
Query: 232 CSVPPRLSSVTIKQLSIDEL 251
CS+P RL+ +K+L+ ++L
Sbjct: 287 CSLPQRLAGRDLKRLAANDL 306
Score = 174 (66.3 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 57/208 (27%), Positives = 96/208 (46%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ W+ + ++ + CP +C+C + K T C + L V G+ +Q + GN
Sbjct: 11 LLAWVLWLQAW-QVAAPCPGACVC-YNEPKVTTSCPQQGLQAVPVGIPAASQRIFLHGNR 68
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTF 119
+ + F+ NL ++L ++ ID+ AF GL L LD S N L++V TF
Sbjct: 69 ISHVPAASFRACR--NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATF 126
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L ++++ G F+ L+ L L L ++ + D F L +L L L
Sbjct: 127 HGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH 186
Query: 180 NNKITTISGSNILPTGLHGID---LHHN 204
N+I+++ GLH +D LH N
Sbjct: 187 GNRISSVPERAF--RGLHSLDRLLLHQN 212
>UNIPROTKB|P22792 [details] [associations]
symbol:CPN2 "Carboxypeptidase N subunit 2" species:9606
"Homo sapiens" [GO:0050821 "protein stabilization" evidence=NAS]
[GO:0005576 "extracellular region" evidence=NAS] [GO:0030234
"enzyme regulator activity" evidence=NAS] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0030234 GO:GO:0005576
GO:GO:0050821 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 CTD:1370 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 EMBL:AC125362
EMBL:J05158 EMBL:AC174158 EMBL:BC031569 EMBL:BC042334 EMBL:BC137398
EMBL:BC137403 IPI:IPI00479116 PIR:A34901 RefSeq:NP_001073982.2
UniGene:Hs.528368 ProteinModelPortal:P22792 SMR:P22792
STRING:P22792 DMDM:52788240 PaxDb:P22792 PRIDE:P22792
Ensembl:ENST00000323830 Ensembl:ENST00000429275 GeneID:1370
KEGG:hsa:1370 UCSC:uc003fts.3 GeneCards:GC03M194060
H-InvDB:HIX0030813 HGNC:HGNC:2313 HPA:HPA004732 MIM:603104
neXtProt:NX_P22792 PharmGKB:PA26830 HOGENOM:HOG000294123
HOVERGEN:HBG050814 InParanoid:P22792 KO:K13023 OMA:WQCDCHL
OrthoDB:EOG4WM4TF BindingDB:P22792 ChEMBL:CHEMBL3685
GenomeRNAi:1370 NextBio:5553 Bgee:P22792 CleanEx:HS_CPN2
Genevestigator:P22792 GermOnline:ENSG00000178772 Uniprot:P22792
Length = 545
Score = 229 (85.7 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 63/188 (33%), Positives = 85/188 (45%)
Query: 69 FQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKL 128
F +G NL + L + V+ + F LV L +HN L+TV TF +L L
Sbjct: 261 FASLG--NLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSL 318
Query: 129 TLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISG 188
LS N I + G F+ L LV L L + + A F L LE L L N++TT+
Sbjct: 319 MLSYNAITHLPAGIFRDLEELVKLYLGSNNLTALHPALFQNLSKLELLSLSKNQLTTLP- 377
Query: 189 SNILPTG--LHGIDLHHNPWTCDCLLIGLRRWLES-TKTPMAIDPICSVPPRLSSVTIKQ 245
I T L + LH NPW CDC L L WL+ T + I C+ P L +
Sbjct: 378 EGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTDRLLNIQTYCAGPAYLKGQVVPA 437
Query: 246 LSIDELAC 253
L+ +L C
Sbjct: 438 LNEKQLVC 445
Score = 156 (60.0 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 49/166 (29%), Positives = 79/166 (47%)
Query: 33 VECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDS 92
VE +L T G +PN + + L + F GL L+ + ++ + +
Sbjct: 57 VETSFTTLETRAFGSNPNLTKVVFLNTQLCQFRPDAFG--GLPRLEDLEVTGSSFLNLST 114
Query: 93 KAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTL 152
F LT+L L + N+L+ +P F +L L L GN ++ + FQPL++L TL
Sbjct: 115 NIFSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLKTL 174
Query: 153 ELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHG 198
L++ + + + F L SL+ LKL NN +SG LP G+ G
Sbjct: 175 NLAQNLLAQLPEELFHPLTSLQTLKLSNN---ALSG---LPQGVFG 214
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 46/159 (28%), Positives = 78/159 (49%)
Query: 31 QTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRI 87
QT++ N +L + +G+ + Q L NN+ L + F + L L++++L R I
Sbjct: 196 QTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQ--LFCLERLWLQRNAI 253
Query: 88 SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLS 147
+ + F L NL L N+L+ +P+ F P L+ L+L+ N ++ + G F LS
Sbjct: 254 THLPLSIFASLGNLTFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHNQLETVAEGTFAHLS 313
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
L +L LS I + F L+ L L L +N +T +
Sbjct: 314 NLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLTAL 352
Score = 137 (53.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 41/138 (29%), Positives = 63/138 (45%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P + L+ TG++ L F L +L K+ L+ + + F+ L L L
Sbjct: 97 PRLEDLEVTGSSFLNLSTNIFSN--LTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQG 154
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N LQ +P F L L L+ N + Q+ F PL+ L TL+LS + + F
Sbjct: 155 NQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSGLPQGVFG 214
Query: 169 GLDSLEWLKLDNNKITTI 186
L SL+ L LD+N I+ +
Sbjct: 215 KLGSLQELFLDSNNISEL 232
Score = 135 (52.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 44/152 (28%), Positives = 68/152 (44%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L GN L+ L FQ L +L+ + L++ ++ + + F LT+L L S+N L
Sbjct: 150 LHLQGNQLQALPRRLFQP--LTHLKTLNLAQNLLAQLPEELFHPLTSLQTLKLSNNALSG 207
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+P F SL +L L N I ++ F L L L L + I + + F L +L
Sbjct: 208 LPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWLQRNAITHLPLSIFASLGNL 267
Query: 174 EWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
+L L N + + T L G+ L HN
Sbjct: 268 TFLSLQWNMLRVLPAGLFAHTPCLVGLSLTHN 299
Score = 127 (49.8 bits), Expect = 0.00015, P = 0.00015
Identities = 39/126 (30%), Positives = 57/126 (45%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N L+ L FQ L L+ ++L ++ + + F+ LT+L L+ + N+L +P +
Sbjct: 131 NMLEALPEGLFQH--LAALESLHLQGNQLQALPRRLFQPLTHLKTLNLAQNLLAQLPEEL 188
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F SL L LS N + + G F L L L L I + F L LE L L
Sbjct: 189 FHPLTSLQTLKLSNNALSGLPQGVFGKLGSLQELFLDSNNISELPPQVFSQLFCLERLWL 248
Query: 179 DNNKIT 184
N IT
Sbjct: 249 QRNAIT 254
>MGI|MGI:1349645 [details] [associations]
symbol:Islr "immunoglobulin superfamily containing
leucine-rich repeat" species:10090 "Mus musculus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:1349645
GO:GO:0005576 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HSSP:P07359
eggNOG:NOG240332 OrthoDB:EOG4QC14W GeneTree:ENSGT00700000104028
CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG
EMBL:AB024538 EMBL:AB024539 EMBL:BC006602 IPI:IPI00123635
RefSeq:NP_001182360.1 RefSeq:NP_036173.1 UniGene:Mm.367887
ProteinModelPortal:Q6GU68 SMR:Q6GU68 STRING:Q6GU68 PRIDE:Q6GU68
Ensembl:ENSMUST00000041477 Ensembl:ENSMUST00000168864 GeneID:26968
KEGG:mmu:26968 UCSC:uc009pwk.2 InParanoid:Q6GU68 NextBio:304907
Bgee:Q6GU68 Genevestigator:Q6GU68 Uniprot:Q6GU68
Length = 428
Score = 226 (84.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 93/371 (25%), Positives = 156/371 (42%)
Query: 9 ATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEK 68
A ++ +V ACP C C K G Q +C + L V G N L + N L L
Sbjct: 10 AVLLNLVRACPEPCDCGEKYGFQIADCAYRDLEGVPPGFPANVTTLSLSANRLPGLPEGA 69
Query: 69 FQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKL 128
F+++ L LQ ++L+ I + A L++L LD SHN+L + +L L
Sbjct: 70 FREVPL--LQSLWLAHNEIRSVAIGALAPLSHLKSLDLSHNLLSEFAWSDLHNLSALQLL 127
Query: 129 TLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISG 188
+ N + AF P DA F L +L L+L++N++ ++
Sbjct: 128 KMDSNEL------AFIP-----------------RDA-FSSLSALRSLQLNHNRLHALAE 163
Query: 189 SNILP-TGLHGIDLHHNPWTCDCLLIGLRRW-LESTKTPMAIDPI-CSVPPRLSSVTIKQ 245
P T L + ++ NP+ C C ++ + W L S + D I C+ P L + + +
Sbjct: 164 GTFAPLTALSHLQINDNPFDCTCGIVWFKTWALASAVSIPEQDNIACTTPHVLKGIPLGR 223
Query: 246 LSIDELACE-PQIT----PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFD--GVPIQNE 298
L L C P + PS E++ G ++L C V P ++ W G ++
Sbjct: 224 LP--PLPCSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPVPQLHWHIHTPGGTVEIA 281
Query: 299 SMSA-SESHAV---YSTEEGTEIK---KSELLIYNSNIDDNGTFVCVAENQAGSTSSNYT 351
S + ++ A+ +T + LLI + + GT+ C+A N+ GS S+
Sbjct: 282 SPNVGTDGRALPGALATSGQPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVN 341
Query: 352 IRIVLKEENVE 362
+ + E E
Sbjct: 342 VALATPGEGGE 352
>UNIPROTKB|F1NJ43 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005622 "intracellular" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 OMA:NISFITP GeneTree:ENSGT00690000101803
EMBL:AADN02011030 IPI:IPI00576878 ProteinModelPortal:F1NJ43
Ensembl:ENSGALT00000030326 Uniprot:F1NJ43
Length = 466
Score = 227 (85.0 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 60/207 (28%), Positives = 101/207 (48%)
Query: 44 VEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVD 103
+ GM+ T V N ++ + Q GL L+ + L RI+V+ +AF+G +
Sbjct: 171 IRGMENLTHVY-LERNRIEAVAYNSLQ--GLTKLKYLNLQDNRINVVHERAFQGCRKMEY 227
Query: 104 LDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
L + N++ +P ++F L L L GN ++ + F+ L L L L + I IE
Sbjct: 228 LYLNDNLISELPENSFDGLRCLKMLNLGGNFLRNVSNTWFRDLVELEVLYLDRNRINYIE 287
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHG-IDLHHNPWTCDCLLIGLRRWLEST 222
+ AF L SL L L++N +TT+ S P G + L NPW CDC + L+ W+E+
Sbjct: 288 EGAFENLTSLVSLHLNSNNLTTLPFSVFQPVYFLGRLYLFRNPWECDCRIEWLKEWMENY 347
Query: 223 KTPMAIDPICSVPPRLSSVTIKQLSID 249
+ + D C+ P ++ + + + D
Sbjct: 348 R--LVRDIPCASPSSVAGIDLMDVLYD 372
Score = 130 (50.8 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 49/206 (23%), Positives = 93/206 (45%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ W+ + + V +CP +C+C + +V C L + ++ N+
Sbjct: 8 VILWVPHVHAVWACVRSCPANCVCTQERSC-SVLCDRAGLGQIPSEFPCEASSINLDKNS 66
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTF 119
+K L F L +L+ + L+ IS I AF+GL +L +L +HN ++ + + TF
Sbjct: 67 IKFLSERAFGT--LPSLKSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLHTRTF 124
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L+KL L+ + I F L L L + I A G+++L + L+
Sbjct: 125 TALRRLVKLDLADCNLFNIPDRIFIELPSLQELFCFQNNFRRIP-GAIRGMENLTHVYLE 183
Query: 180 NNKITTISGSNILP-TGLHGIDLHHN 204
N+I ++ +++ T L ++L N
Sbjct: 184 RNRIEAVAYNSLQGLTKLKYLNLQDN 209
>MGI|MGI:2385612 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10090 "Mus musculus" [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 MGI:MGI:2385612 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357
OMA:PHGGNGS OrthoDB:EOG4GTKCM EMBL:DQ078786 EMBL:AK081560
EMBL:AK163603 EMBL:BC023036 EMBL:BC023156 IPI:IPI00330802
RefSeq:NP_700437.2 UniGene:Mm.329675 ProteinModelPortal:Q80XU8
SMR:Q80XU8 STRING:Q80XU8 PhosphoSite:Q80XU8 PaxDb:Q80XU8
PRIDE:Q80XU8 Ensembl:ENSMUST00000053597 Ensembl:ENSMUST00000113822
GeneID:225875 KEGG:mmu:225875 UCSC:uc008gah.2 InParanoid:Q460G5
NextBio:377837 Bgee:Q80XU8 Genevestigator:Q80XU8
GermOnline:ENSMUSG00000045045 Uniprot:Q80XU8
Length = 636
Score = 229 (85.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 93/381 (24%), Positives = 157/381 (41%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+ + +ACP C+C+ + C ++ L+ V +D T L N ++ L
Sbjct: 6 LLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQALGP 65
Query: 67 EKFQKM-GLVNL---------------------QKIYLSRCRISVIDSKAFRGLTNLVDL 104
F+ M GLV+L + ++L R+ + S + RG NL L
Sbjct: 66 PDFRNMTGLVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHL 125
Query: 105 DFSHNVLQTVPSDTFPDY-PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
S N L + F D+ SL L +S N ++Q+ + L TL L I+ +
Sbjct: 126 ILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNLIDALP 185
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHG--------IDLHHNPWTCDCLLIGL 215
F L L L L +N++ T++ + G + NP C+C L+
Sbjct: 186 PGVFAQLSQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGNPLHCNCELL-- 243
Query: 216 RRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQ-ITPSTFYLEIQEGKNVSL 274
WL P ++ C+ PP L+ + E +CEP I T L + EG+ +L
Sbjct: 244 --WLRRLARPDDLET-CASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLEGQRATL 300
Query: 275 LCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGT 334
C+ P + W+ G P ++ + + S A ++ GT L I + D G
Sbjct: 301 RCRALGDPVPTMHWV--G-P--DDRLVGNSSRA-WAFPNGT------LEIGVTGAGDAGA 348
Query: 335 FVCVAENQAGSTSSNYTIRIV 355
+ C+A N AG ++ +R++
Sbjct: 349 YTCIATNPAGEATARVELRVL 369
>RGD|1585286 [details] [associations]
symbol:Lrfn4 "leucine rich repeat and fibronectin type III
domain containing 4" species:10116 "Rattus norvegicus" [GO:0016021
"integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 SMART:SM00060
RGD:1585286 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473953
GeneTree:ENSGT00660000095307 CTD:78999 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM IPI:IPI00195375 RefSeq:NP_001102978.1
UniGene:Rn.198548 ProteinModelPortal:D4ABX8
Ensembl:ENSRNOT00000026169 GeneID:688721 KEGG:rno:688721
UCSC:RGD:1585286 NextBio:737115 Uniprot:D4ABX8
Length = 636
Score = 229 (85.7 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 93/381 (24%), Positives = 157/381 (41%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+ + +ACP C+C+ + C ++ L+ V +D T L N ++ L
Sbjct: 6 LLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQALGP 65
Query: 67 EKFQKM-GLVNL---------------------QKIYLSRCRISVIDSKAFRGLTNLVDL 104
F+ M GLV+L + ++L R+ + S + RG NL L
Sbjct: 66 PDFRNMTGLVDLTLSRNAITRIGARSFGDLESLRSLHLDGNRLVELGSSSLRGPVNLQHL 125
Query: 105 DFSHNVLQTVPSDTFPDY-PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
S N L + F D+ SL L +S N ++Q+ + L TL L I+ +
Sbjct: 126 ILSGNQLGRIAPGAFDDFLDSLEDLDVSYNNLRQVPWAGIGSMPALHTLNLDHNLIDALP 185
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHG--------IDLHHNPWTCDCLLIGL 215
F L L L L +N++ T++ + G + NP C+C L+
Sbjct: 186 PGVFAQLSQLSRLDLTSNRLATLAPDPLFSRGRDAEASPSPLVLSFSGNPLHCNCELL-- 243
Query: 216 RRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQ-ITPSTFYLEIQEGKNVSL 274
WL P ++ C+ PP L+ + E +CEP I T L + EG+ +L
Sbjct: 244 --WLRRLARPDDLET-CASPPTLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLEGQRATL 300
Query: 275 LCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGT 334
C+ P + W+ G P ++ + + S A ++ GT L I + D G
Sbjct: 301 RCRALGDPVPTMHWV--G-P--DDRLVGNSSRA-WAFPNGT------LEIGVTGAGDAGA 348
Query: 335 FVCVAENQAGSTSSNYTIRIV 355
+ C+A N AG ++ +R++
Sbjct: 349 YTCIATNPAGEATARVELRVL 369
>UNIPROTKB|A4IFA6 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9913 "Bos taurus" [GO:0005576
"extracellular region" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W
GeneTree:ENSGT00700000104028 EMBL:BC134481 IPI:IPI00685291
RefSeq:NP_001074198.1 UniGene:Bt.1899 ProteinModelPortal:A4IFA6
PRIDE:A4IFA6 Ensembl:ENSBTAT00000007913 GeneID:515018
KEGG:bta:515018 CTD:3671 HOGENOM:HOG000113109 HOVERGEN:HBG100853
InParanoid:A4IFA6 OMA:HGKAVEG NextBio:20871625 Uniprot:A4IFA6
Length = 428
Score = 225 (84.3 bits), Expect = 1.5e-15, P = 1.5e-15
Identities = 93/376 (24%), Positives = 155/376 (41%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ + ++ + ACP C C K G +C + L V G N L + N L +L
Sbjct: 6 LLCLVVLVGLAQACPEPCECGEKYGFHIADCAYRDLQAVPSGFPANVTTLSLSANQLPSL 65
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD-TFPDYP 123
F+++ LQ ++L+ I + + A L+ L LD SHN++ SD + D
Sbjct: 66 PGGAFREVP--RLQSLWLAHNEIRSVAAGALASLSQLKSLDLSHNLI----SDFAWSDLH 119
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
SL L L L++ + I AF L +L L+L++N++
Sbjct: 120 SLSALQL---------------------LKMDSNELTFIPRDAFRSLRALRSLQLNHNRL 158
Query: 184 TTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKT--PMAIDPICSVPPRLSS 240
T++ P T L + ++ NP+ C C ++ + W +T P + C+ P L
Sbjct: 159 HTLAEGTFAPLTALSHLQINDNPFDCTCGIVWFKTWALTTAVSIPEQDNITCTSPHVLKG 218
Query: 241 VTIKQLSIDELACE-P--QIT--PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFD---G 292
+ +L L C P Q+T PS E++ G ++L C V P ++ W G
Sbjct: 219 TRLNRLL--PLPCSAPSVQLTYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQTPGG 276
Query: 293 -VPIQNESMSASESH-----AVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGST 346
V I + ++ A A S LLI + + GT+ C+A N+ GS
Sbjct: 277 TVEITSPNVGADGRALPGVLAASSRPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSA 336
Query: 347 SSNYTIRIVLKEENVE 362
S+ + + E E
Sbjct: 337 ESSVNVALATPGEGGE 352
>UNIPROTKB|G3MXX5 [details] [associations]
symbol:RTN4R "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0009986 "cell surface" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 GO:GO:0005886
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 OMA:PLWAWLQ EMBL:DAAA02045821
Ensembl:ENSBTAT00000065527 Uniprot:G3MXX5
Length = 473
Score = 226 (84.6 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 67/210 (31%), Positives = 98/210 (46%)
Query: 54 LDYTGN-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD + N L+ + F+ GL L ++L RC + + FRGL L L N LQ
Sbjct: 110 LDLSDNAQLRAVDPATFR--GLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGLQ 167
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+P D F D +L L L GN I + AF+ L L L L + + + AF L
Sbjct: 168 ALPDDAFSDLGNLTHLFLHGNHIPSVPERAFRGLHSLDRLLLHQNRVARVHPHAFRDLGR 227
Query: 173 LEWLKLDNNKITTISGSNILPT-GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L N ++ +S + P L + L+ NPW CDC L WL+ + + P
Sbjct: 228 LMTLYLFANNLSALSAEALAPLRSLQYLRLNDNPWVCDCRARPLWAWLQQFRGSSSELP- 286
Query: 232 CSVPPRLSSVTIKQLSIDEL-ACEPQITPS 260
CS+P RL+ +K+L+ +L C P+
Sbjct: 287 CSLPARLAGRDLKRLAATDLEGCAVATLPA 316
Score = 175 (66.7 bits), Expect = 6.8e-10, P = 6.8e-10
Identities = 58/208 (27%), Positives = 94/208 (45%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ W+ + ++ + CP +C+C + K T C + L V + +Q + GN
Sbjct: 11 LLAWVLWLQAW-RVAAPCPGACVC-YSEPKVTTSCPQQGLQAVPADIPAASQRVFLHGNR 68
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTF 119
+ + F+ NL ++L ++ ID+ AF GL L LD S N L+ V TF
Sbjct: 69 IAYVPAASFRACR--NLTILWLHSNALAHIDAAAFSGLALLEQLDLSDNAQLRAVDPATF 126
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L ++++ G F+ L+ L L L G++ + D AF L +L L L
Sbjct: 127 RGLGRLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNGLQALPDDAFSDLGNLTHLFLH 186
Query: 180 NNKITTISGSNILPTGLHGID---LHHN 204
N I ++ GLH +D LH N
Sbjct: 187 GNHIPSVPERAF--RGLHSLDRLLLHQN 212
>UNIPROTKB|Q86WK6 [details] [associations]
symbol:AMIGO1 "Amphoterin-induced protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0007413 "axonal fasciculation" evidence=ISS] [GO:0042552
"myelination" evidence=ISS] [GO:0050772 "positive regulation of
axonogenesis" evidence=ISS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237007
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030424 InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0042552
GO:GO:0050772 GO:GO:0007157 InterPro:IPR000372 SMART:SM00013
EMBL:AK295678 EMBL:AL355145 EMBL:BC040879 EMBL:AB032989
IPI:IPI00410140 RefSeq:NP_065754.2 UniGene:Hs.726479
ProteinModelPortal:Q86WK6 SMR:Q86WK6 STRING:Q86WK6
PhosphoSite:Q86WK6 DMDM:68052342 PaxDb:Q86WK6 PRIDE:Q86WK6
DNASU:57463 Ensembl:ENST00000369862 Ensembl:ENST00000369864
GeneID:57463 KEGG:hsa:57463 UCSC:uc001dxx.4 CTD:57463
GeneCards:GC01M110046 HGNC:HGNC:20824 HPA:HPA046152
neXtProt:NX_Q86WK6 PharmGKB:PA142672625 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 InParanoid:Q86WK6
OMA:SVELKVY OrthoDB:EOG4TB4BP PhylomeDB:Q86WK6 ChiTaRS:AMIGO1
GenomeRNAi:57463 NextBio:63666 Bgee:Q86WK6 CleanEx:HS_AMIGO1
Genevestigator:Q86WK6 GermOnline:ENSG00000181754 GO:GO:0007413
GO:GO:0007156 InterPro:IPR013106 Pfam:PF07686 Uniprot:Q86WK6
Length = 493
Score = 225 (84.3 bits), Expect = 2.3e-15, P = 2.3e-15
Identities = 90/362 (24%), Positives = 153/362 (42%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+F +A + V +CP +C+C + C + L V + T +LD + NNL L
Sbjct: 21 LFEVARAGRAVVSCPAACLC----ASNILSCSKQQLPNVPHSLPSYTALLDLSHNNLSRL 76
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
E + L L + LS ++ I S+AF + NL LD S N L+T+ F D
Sbjct: 77 RAE-WTPTRLTQLHSLLLSHNHLNFISSEAFSPVPNLRYLDLSSNQLRTLDEFLFSDLQV 135
Query: 125 LMKLTLSGNPIKQIKTGAFQPLS-----YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L N I + AF ++ YL ++S+ +E++++ A L L L L
Sbjct: 136 LEVLLLYNNHIMAVDRCAFDDMAQLQKLYLSQNQISRFPLELVKEGA--KLPKLTLLDLS 193
Query: 180 NNKITTISGSNI--LPTGL-HGIDLHHNPWTCDCLLIGL-RRWLE---STKTPMAIDPIC 232
+NK+ + ++ LP + +G+ LH+NP CDC L L W S+ D C
Sbjct: 194 SNKLKNLPLPDLQKLPAWIKNGLYLHNNPLNCDCELYQLFSHWQYRQLSSVMDFQEDLYC 253
Query: 233 SVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDG 292
+L +V ++ L C + + E G + + C K+ W+
Sbjct: 254 MNSKKLHNV----FNLSFLNCG-EYKERAW--EAHLGDTLIIKCDTKQQGMTKV-WV--- 302
Query: 293 VPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI 352
P NE + ++ S K LL ++D G + C A + + + + +
Sbjct: 303 TP-SNERVLDEVTNGTVSVS-----KDGSLLFQQVQVEDGGVYTCYAMGETFNETLSVEL 356
Query: 353 RI 354
++
Sbjct: 357 KV 358
>UNIPROTKB|Q9NR99 [details] [associations]
symbol:MXRA5 "Matrix-remodeling-associated protein 5"
species:9606 "Homo sapiens" [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR007110 PROSITE:PS50835 GO:GO:0005576
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HSSP:Q9BZR6 eggNOG:NOG239806 EMBL:AF245505 EMBL:AC004616
EMBL:BC011846 EMBL:BC064986 EMBL:BC080586 EMBL:AL049946
IPI:IPI00012347 PIR:T08678 RefSeq:NP_056234.2 UniGene:Hs.369422
ProteinModelPortal:Q9NR99 STRING:Q9NR99 PhosphoSite:Q9NR99
DMDM:117949607 PaxDb:Q9NR99 PRIDE:Q9NR99 Ensembl:ENST00000217939
Ensembl:ENST00000381114 GeneID:25878 KEGG:hsa:25878 UCSC:uc004crg.4
CTD:25878 GeneCards:GC0XM003220 H-InvDB:HIX0016637 HGNC:HGNC:7539
HPA:HPA000508 neXtProt:NX_Q9NR99 PharmGKB:PA31340
HOGENOM:HOG000168306 InParanoid:Q9NR99 OMA:GALMTPN
OrthoDB:EOG4B5P48 PhylomeDB:Q9NR99 GenomeRNAi:25878 NextBio:47288
Bgee:Q9NR99 CleanEx:HS_MXRA5 Genevestigator:Q9NR99
GermOnline:ENSG00000101825 Uniprot:Q9NR99
Length = 2828
Score = 183 (69.5 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 57/216 (26%), Positives = 94/216 (43%)
Query: 13 KIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKM 72
++ ACP C C V C +SL +V G+ + + ++ N+++ L F
Sbjct: 22 RVALACPHPCACYVPS---EVHCTFRSLASVPAGIAKHVERINLGFNSIQALSETSFA-- 76
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L+ + + I I A R L++L FS+N L+ + T +LM+L +
Sbjct: 77 GLTKLELLMIHGNEIPSIPDGALRDLSSLQVFKFSYNKLRVITGQTLQGLSNLMRLHIDH 136
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN--------NKIT 184
N I+ I AF L+ L L L + + + F L++ +L N +
Sbjct: 137 NKIEFIHPQAFNGLTSLRLLHLEGNLLHQLHPSTFSTFTFLDYFRLSTIRHLYLAENMVR 196
Query: 185 TISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRW 218
T+ S + +P L + L NPWTCDC + W
Sbjct: 197 TLPASMLRNMPL-LENLYLQGNPWTCDCEMRWFLEW 231
Score = 109 (43.4 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G++V+L C AIPEA ++W+ I N+ A+ SH VY GT L I
Sbjct: 592 GESVTLPCNALAIPEAHLSWILPNRRIINDL--ANTSH-VYMLPNGT------LSIPKVQ 642
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIVLKEE 359
+ D+G + CVA NQ G+ ++T+ I + ++
Sbjct: 643 VSDSGYYRCVAVNQQGA--DHFTVGITVTKK 671
Score = 99 (39.9 bits), Expect = 2.8e-14, Sum P(2) = 2.8e-14
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 245 QLSIDELACEPQIT--PSTF----YLEIQE--GKNVSLLCKVSAIPEAKITWLFDGVPIQ 296
Q+ DE+ ++ P+T YL +Q G V++ C+ P K+TWL P
Sbjct: 2329 QVGKDEMRVRVKVVTAPATIRNKTYLAVQVPYGDVVTVACEAKGEPMPKVTWLS---PTN 2385
Query: 297 NESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
++SE + +Y ++GT LLI + D+G + C+ N AG I +
Sbjct: 2386 KVIPTSSEKYQIY--QDGT------LLIQKAQRSDSGNYTCLVRNSAGEDRKTVWIHV 2435
Score = 87 (35.7 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 27/121 (22%), Positives = 54/121 (44%)
Query: 254 EPQITPSTFY-LEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTE 312
+PQI S + + + G +++ C P +I+W+F + +++S E
Sbjct: 1949 QPQILASHYQDVTVYLGDTIAMECLAKGTPAPQISWIFPDRRVW-QTVSPVEGRITLHEN 2007
Query: 313 EGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI-----VLKEENVEVVTVF 367
IK++ + D G + CVA N AG+ S + + V+ +E +E +++
Sbjct: 2008 RTLSIKEA-------SFSDRGVYKCVASNAAGADSLAIRLHVAALPPVIHQEKLENISLP 2060
Query: 368 P 368
P
Sbjct: 2061 P 2061
Score = 85 (35.0 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 31/118 (26%), Positives = 52/118 (44%)
Query: 243 IKQLSIDELACEPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
I QL++ E +P P + + G +SL C + P + W+ +P + S
Sbjct: 2530 ILQLTVLEPMEKPIFHDPISEKITAMAGHTISLNCSAAGTPTPSLVWV---LPNGTDLQS 2586
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEE 359
+ Y +G + S L S++D G + CVA N AG T ++++ LK E
Sbjct: 2587 GQQLQRFYHKADGM-LHISGL----SSVDA-GAYRCVARNAAGHTERLVSLKVGLKPE 2638
Score = 85 (35.0 bits), Expect = 7.9e-13, Sum P(2) = 7.9e-13
Identities = 30/120 (25%), Positives = 53/120 (44%)
Query: 245 QLSIDELACEPQIT-PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSAS 303
QL++ A +IT S +++ G + L C S P +I W +P S
Sbjct: 2136 QLNVQRAAANARITGTSPRRTDVRYGGTLKLDCSASGDPWPRILWR---LP------SKR 2186
Query: 304 ESHAVYSTEEGTEIKKSELLIYNSNID-DNGTFVCVAENQAGSTSSNYTIRIVLKEENVE 362
A++S + ++ + L+ S D D G ++CVA N+ G + +V+K +E
Sbjct: 2187 MIDALFSFDSRIKVFANGTLVVKSVTDKDAGDYLCVARNKVGDDYVVLKVDVVMKPAKIE 2246
Score = 82 (33.9 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 29/114 (25%), Positives = 50/114 (43%)
Query: 242 TIKQLSIDELACEPQITPS-TFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESM 300
++ + + +A P+IT T + + G V L C IP+A ITW +P ++ +
Sbjct: 2720 SVTSIPVIVIAYPPRITSEPTPVIYTRPGNTVKLNCMAMGIPKADITW---ELPDKSH-L 2775
Query: 301 SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRI 354
A +Y + L I ++ D G + C+A+N GS S I +
Sbjct: 2776 KAGVQARLYGNR--FLHPQGSLTIQHATQRDAGFYKCMAKNILGSDSKTTYIHV 2827
Score = 81 (33.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 269 GKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNS 327
G ++ + C + +P +I+W L DG + N M + +S T+ L
Sbjct: 2258 GGDLKVDCVATGLPNPEISWSLPDG-SLVNSFMQSDDSGG--RTKRYVVFNNGTLYFNEV 2314
Query: 328 NIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ + G + C AENQ G +++V
Sbjct: 2315 GMREEGDYTCFAENQVGKDEMRVRVKVV 2342
Score = 67 (28.6 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
Identities = 23/106 (21%), Positives = 38/106 (35%)
Query: 264 LEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTEIKKSEL 322
+ + G ++ + C A P + W+ DG I+ ++ GT L
Sbjct: 2057 ISLPPGLSIHIHCTAKAAPLPSVRWVLGDGTQIRPSQFLHGN---LFVFPNGT------L 2107
Query: 323 LIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFP 368
I N D+G + CVA N GS + + N + P
Sbjct: 2108 YIRNLAPKDSGRYECVAANLVGSARRTVQLNVQRAAANARITGTSP 2153
Score = 61 (26.5 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 25/88 (28%), Positives = 35/88 (39%)
Query: 259 PSTFYLEIQEGKNVSLL-CKVSAIPEAKITWLF-DGVPIQNESMSASESHAVYSTEEGTE 316
P T EI G + L+ CK IP ++ W F +GV + A Y T
Sbjct: 2448 PITTVREIAAGGSRKLIDCKAEGIPTPRVLWAFPEGVVLP----------APYYGNRITV 2497
Query: 317 IKKSELLIYNSNIDDNGTFVCVAENQAG 344
L I + D+ VC+A N+ G
Sbjct: 2498 HGNGSLDIRSLRKSDSVQLVCMARNEGG 2525
Score = 55 (24.4 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 30/137 (21%), Positives = 53/137 (38%)
Query: 478 PSYSISYQIEQNPDLVNDAESVDKDRRAQGGEDTQDTQDKASEAASVQYSDSGSQCQEWG 537
P ++I + D+ S++ R ++ Q++ + S Q Q +W
Sbjct: 259 PKKLYKHEIHKLKDMTCLKPSIESPLRQNRSRSIEEEQEQEEDGGS-QLILEKFQLPQW- 316
Query: 538 NVCYNRMQPMQHIVLNNVYN--QPAD---IHLTPEKFMDRD---GYPVDFGLPKVPTHFP 589
++ N ++V N V + +P D IHL D D +DF P ++
Sbjct: 317 SISLNMTDEHGNMV-NLVCDIKKPMDVYKIHLNQTDPPDIDINATVALDFECPMTRENYE 375
Query: 590 ALVPATAYYRTLPHRRH 606
L AYY +P + H
Sbjct: 376 KLWKLIAYYSEVPVKLH 392
Score = 53 (23.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 18/92 (19%), Positives = 36/92 (39%)
Query: 254 EPQI-TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTE 312
+PQI T S + + + C+ + P+ +TW + ++ + +
Sbjct: 1852 KPQILTKSPQTVSVTAETDTVFPCEATGKPKPFVTW----TKVSTGALMTPNTRI----Q 1903
Query: 313 EGTEIKKSELLIYNSNIDDNGTFVCVAENQAG 344
+K L+I + D G ++C A N G
Sbjct: 1904 RFEVLKNGTLVIRKVQVQDRGQYMCTASNLHG 1935
Score = 53 (23.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 18/93 (19%), Positives = 41/93 (44%)
Query: 264 LEIQEGKNVSLLCKVSAIPEAKITW-LFDGVPIQNESMSASESHAVYSTEEGTEIKKSEL 322
+ I G+ + L C + + +W L +G+ ++ S + GT L
Sbjct: 2647 VSIINGETLKLPCTPPGAGQGRFSWTLPNGMHLEGPQTLGRVS----LLDNGT------L 2696
Query: 323 LIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+ +++ D GT+VC E + G + ++ + ++
Sbjct: 2697 TVREASVFDRGTYVCRMETEYGPSVTSIPVIVI 2729
Score = 46 (21.3 bits), Expect = 8.5e-09, Sum P(2) = 8.5e-09
Identities = 18/75 (24%), Positives = 26/75 (34%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ EG L C V A I W+ I M +S + IK E
Sbjct: 491 VLEGGPCQLSCNVKASESPSIFWVLPDGSILKAPMDDPDSKFSILSSGWLRIKSMEP--- 547
Query: 326 NSNIDDNGTFVCVAE 340
D+G + C+A+
Sbjct: 548 ----SDSGLYQCIAQ 558
Score = 43 (20.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 290 FDGVPIQNESMSASESH---AVYSTEEGTEIKKSELLIYNSNIDDNGTFVC---VA---- 339
F G P N S +A + T G + LL ++D F+ V+
Sbjct: 1374 FPGTPTWNPSRTAQPGRLQTGIPVTTSGENLTDPPLLKELEDVDFTSEFLSSLTVSTPFH 1433
Query: 340 ENQAGSTSSNYTIRIVLKEENVEVVTV 366
+ +AGS+++ +I++ + E T+
Sbjct: 1434 QEEAGSSTTLSSIKVEVASSQAETTTL 1460
>UNIPROTKB|F1PKU2 [details] [associations]
symbol:PXDNL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0020037 "heme binding" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0004601 "peroxidase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS01208
PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450
SMART:SM00214 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0006979
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 SUPFAM:SSF48113
Gene3D:1.10.640.10 GeneTree:ENSGT00550000074325 OMA:EFRYNDL
EMBL:AAEX03015771 EMBL:AAEX03015772 EMBL:AAEX03015773
Ensembl:ENSCAFT00000010829 Uniprot:F1PKU2
Length = 1429
Score = 246 (91.7 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 78/273 (28%), Positives = 124/273 (45%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I AF+ L L L ++N ++ + + F +L+ L L N I+ + F+
Sbjct: 22 RIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRALDKQTFKG 81
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHN 204
L L L + IE+++ F L LE L L NNK++ I +GS L + L N
Sbjct: 82 LISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSN 141
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPI--CSVPPRLSSVTIKQLSIDELACE-PQITPST 261
CDC L+ L ++ I C P RL +I L+++E CE P+IT
Sbjct: 142 ALVCDCDLMWLGELMQGYARNGQIQAAATCEYPRRLQGRSIASLTVEEFNCESPRITYEP 201
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSE 321
+E+ G V C+ P+ +I W+ + N S+ + H + ++GT
Sbjct: 202 QDVEVTSGNTVYFTCRAEGNPKPEIIWIHN-----NHSLDLEDDHRLNLFDDGT------ 250
Query: 322 LLIYNSNIDDNGTFVCVAENQAGSTSS-NYTIR 353
L+I N+ D G + C+A N AG + N +R
Sbjct: 251 LMIRNTRESDQGEYQCMARNSAGEVKTQNAMLR 283
Score = 127 (49.8 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 35/120 (29%), Positives = 58/120 (48%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N ++ + F+ GL NL +YL + I +D + F+GL +L L N
Sbjct: 38 NTLLLN--NNQIRQISRNAFE--GLENLLYLYLYKNEIRALDKQTFKGLISLEQLYIHFN 93
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
++ + +TF D L +L L N + +I G+F L L L L + D ++G
Sbjct: 94 QIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLKRLRLDSNALVCDCDLMWLG 153
Score = 124 (48.7 bits), Expect = 3.6e-08, Sum P(4) = 3.6e-08
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 55 DYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
D N ++ + F+K+ +N + L+ +I I AF GL NL+ L N ++ +
Sbjct: 17 DLRFNRIREIPESAFKKLKTLNT--LLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRAL 74
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE 174
TF SL +L + N I+ ++ F L L L L + I +F LDSL+
Sbjct: 75 DKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNNKLSKIPAGSFSHLDSLK 134
Query: 175 WLKLDNNKI 183
L+LD+N +
Sbjct: 135 RLRLDSNAL 143
Score = 110 (43.8 bits), Expect = 9.9e-07, Sum P(4) = 9.9e-07
Identities = 33/104 (31%), Positives = 48/104 (46%)
Query: 102 VDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEV 161
V D N ++ +P F +L L L+ N I+QI AF+ L L+ L L K I
Sbjct: 14 VHRDLRFNRIREIPESAFKKLKTLNTLLLNNNQIRQISRNAFEGLENLLYLYLYKNEIRA 73
Query: 162 IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLHGIDLHHN 204
++ F GL SLE L + N+I + L + LH+N
Sbjct: 74 LDKQTFKGLISLEQLYIHFNQIEMLQPETFGDLLKLERLFLHNN 117
Score = 102 (41.0 bits), Expect = 1.7e-08, Sum P(4) = 1.7e-08
Identities = 33/122 (27%), Positives = 58/122 (47%)
Query: 238 LSSVTIKQLSIDELACEPQITPSTFYL----EIQEGKNVSLLCKVSAIPEAKITWLFDGV 293
+S + +++ S+ +L +P+ P L ++ GKN+++ C P+ ITW GV
Sbjct: 452 VSPLGVRKASV-QLTVKPKALPVLTQLPQDTSVEVGKNINISCHAEGEPQPIITWNKAGV 510
Query: 294 PIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIR 353
I +ES + + EG L IY++ D G + CVA+N G +N +
Sbjct: 511 QI-------TESGKFHVSGEGM------LTIYDAGQADQGRYECVAQNSFGLVVANMFLT 557
Query: 354 IV 355
+V
Sbjct: 558 VV 559
Score = 74 (31.1 bits), Expect = 9.2e-06, Sum P(4) = 9.2e-06
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 265 EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLI 324
E+ G + +L C + P ++TW G E++ S H +T G +K
Sbjct: 301 EVLIGTSTTLECMATGHPHPRVTWT-RG---NGEALDGSR-HL--ATSGGLYLK------ 347
Query: 325 YNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLI 374
N + D+G F+C A N G+ + T I+++ TV P + V++
Sbjct: 348 -NVTLQDHGQFICHANNNQGTVQA--TANIIVQAP--PQFTVIPKDQVVL 392
Score = 55 (24.4 bits), Expect = 0.00060, Sum P(4) = 0.00060
Identities = 28/114 (24%), Positives = 44/114 (38%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
PQ T + E V LC+ P I W G + E + H V S+ G
Sbjct: 380 PQFTVIPKDQVVLEEHTVEFLCEAEGNPPPIIAWTKAGGKLPQEGL-----HTVLSS--G 432
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFP 368
T L I D G + C A + G ++ +++ +K + + V+T P
Sbjct: 433 T------LRIDQVARHDQGQYECQAVSPLGVRKAS--VQLTVKPKALPVLTQLP 478
Score = 44 (20.5 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 19/82 (23%), Positives = 35/82 (42%)
Query: 538 NVCYNRMQPMQHIVLNNVYNQPADIHLTPEKFMDRDGYPVDFGLPK-VPTHFPALVPATA 596
++C+++ Q NN+ + LT + + + Y F LP+ V P+ P
Sbjct: 681 DMCFHQKYRAQDGTCNNLQHPTWGASLTAFERVLKPAYENGFNLPRGVGRRSPSGPPPLP 740
Query: 597 YYRTLPHRRHTAA--NPNNRYS 616
R + AA P++RY+
Sbjct: 741 PPRLVSTELAAAAAVTPDDRYT 762
Score = 38 (18.4 bits), Expect = 3.4e-15, Sum P(3) = 3.4e-15
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 694 SADEQPSTSNPEKSNENKSEGFQA 717
SA P + PE+ + ++S F A
Sbjct: 899 SAGPPPECTRPEQGSRSRSRCFLA 922
>MGI|MGI:106036 [details] [associations]
symbol:Lrrn3 "leucine rich repeat protein 3, neuronal"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=ISO] [GO:0032403 "protein
complex binding" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:106036
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131 MEROPS:I43.001
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 CTD:54674 OMA:RWINMNK OrthoDB:EOG4MGS6W
EMBL:D49802 EMBL:AK036316 EMBL:BC069041 IPI:IPI00314773
RefSeq:NP_001258637.1 RefSeq:NP_001258638.1 RefSeq:NP_034863.1
UniGene:Mm.39913 ProteinModelPortal:Q8CBC6 SMR:Q8CBC6 STRING:Q8CBC6
PRIDE:Q8CBC6 Ensembl:ENSMUST00000043884 GeneID:16981 KEGG:mmu:16981
UCSC:uc007nln.1 InParanoid:Q8CBC6 NextBio:291064 Bgee:Q8CBC6
CleanEx:MM_LRRN3 Genevestigator:Q8CBC6
GermOnline:ENSMUSG00000036295 Uniprot:Q8CBC6
Length = 707
Score = 226 (84.6 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 81/309 (26%), Positives = 135/309 (43%)
Query: 58 GNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
G NL + ++ GL NL+ I R+S + A + NL LD + N + +
Sbjct: 221 GINLTEIPDDALA--GLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNPINRIRRG 278
Query: 118 TFPDYPSLMKLTLSGNP-IKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEW 175
F + L +L ++ P + I + A L L +E + + I AF L LE
Sbjct: 279 DFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLES 338
Query: 176 LKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDP-- 230
L L+ N ++ + I LP L I +H NP CDC++ RW+ KT + ++P
Sbjct: 339 LMLNTNALSALYHGTIESLPN-LKEISIHSNPIRCDCVI----RWINMNKTNIRFMEPDS 393
Query: 231 -ICSVPPRLSSVTIKQLSIDELA--CEPQITPSTFY--LEIQEGKNVSLLCKVSAIPEAK 285
C PP ++Q+ ++ C P I P +F L+++ VSL C+ +A P+ +
Sbjct: 394 LFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSDLDVEADSYVSLHCRATAEPQPE 453
Query: 286 ITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
I W+ P + + + Y EGT L I + G + C+A N G+
Sbjct: 454 IYWI---TPSGKKLLPNTMREKFYVHSEGT------LEIRGITPKEGGLYTCIATNLVGA 504
Query: 346 TSSNYTIRI 354
+ I++
Sbjct: 505 DLKSIMIKV 513
Score = 187 (70.9 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 58/171 (33%), Positives = 88/171 (51%)
Query: 37 NKSLITVVEGMDPNTQVLD-YTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAF 95
N S +T + + +Q+L Y N T EK GL NLQ++Y++ +S I AF
Sbjct: 103 NLSSVTNIN-VQKMSQLLSVYLEENKLTELPEKCL-YGLSNLQELYVNHNLLSTISPGAF 160
Query: 96 RGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELS 155
GL NL+ L + N LQ + S F P+L L L NPI +IK FQPL L +L ++
Sbjct: 161 IGLHNLLRLHLNSNRLQMINSQWFDALPNLEILMLGDNPIIRIKDMNFQPLVKLRSLVIA 220
Query: 156 KCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLHGIDLHHNP 205
+ I D A GL++LE + +N+++ + + L +DL+ NP
Sbjct: 221 GINLTEIPDDALAGLENLESISFYDNRLSKVPQVALQKAVNLKFLDLNKNP 271
Score = 145 (56.1 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 53/197 (26%), Positives = 88/197 (44%)
Query: 7 LIATIIKIVSACPTSCICK---WKGGKQ------TVECVNKSLITVVEGMDPNTQVLDYT 57
L+ I K V CP C C+ W + TV+C + L+ + +TQ+L
Sbjct: 19 LVQAIDKKVD-CPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQ 77
Query: 58 GNNLKTL-HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
NN+ + H+ F VNL + LS+ +S + + + ++ L+ + N L +P
Sbjct: 78 TNNIARIEHSTDFP----VNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPE 133
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
+L +L ++ N + I GAF L L+ L L+ +++I F L +LE L
Sbjct: 134 KCLYGLSNLQELYVNHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSQWFDALPNLEIL 193
Query: 177 KLDNNKITTISGSNILP 193
L +N I I N P
Sbjct: 194 MLGDNPIIRIKDMNFQP 210
>UNIPROTKB|Q9H3W5 [details] [associations]
symbol:LRRN3 "Leucine-rich repeat neuronal protein 3"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0030131
HOGENOM:HOG000252914 HOVERGEN:HBG052361 EMBL:AF134481 EMBL:AB060967
EMBL:AY358280 EMBL:CR457397 EMBL:AL442092 EMBL:BC035133
IPI:IPI00465126 RefSeq:NP_001093128.1 RefSeq:NP_001093130.1
RefSeq:NP_060804.3 UniGene:Hs.3781 ProteinModelPortal:Q9H3W5
SMR:Q9H3W5 STRING:Q9H3W5 DMDM:74761421 PRIDE:Q9H3W5 DNASU:54674
Ensembl:ENST00000308478 Ensembl:ENST00000422987
Ensembl:ENST00000451085 GeneID:54674 KEGG:hsa:54674 UCSC:uc003vfs.4
CTD:54674 GeneCards:GC07P110731 HGNC:HGNC:17200 neXtProt:NX_Q9H3W5
PharmGKB:PA30468 InParanoid:Q9H3W5 OMA:RWINMNK OrthoDB:EOG4MGS6W
PhylomeDB:Q9H3W5 GenomeRNAi:54674 NextBio:57220 ArrayExpress:Q9H3W5
Bgee:Q9H3W5 CleanEx:HS_LRRN3 Genevestigator:Q9H3W5 Uniprot:Q9H3W5
Length = 708
Score = 226 (84.6 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 82/317 (25%), Positives = 139/317 (43%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N + L G NL + + +GL NL+ I R+ + A + + NL LD + N
Sbjct: 213 NLRSLVIAGINLTEIPDNAL--VGLENLESISFYDNRLIKVPHVALQKVVNLKFLDLNKN 270
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNP-IKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAF 167
+ + F + L +L ++ P + I + A L L +E + + I AF
Sbjct: 271 PINRIRRGDFSNMLHLKELGINNMPELISIDSLAVDNLPDLRKIEATNNPRLSYIHPNAF 330
Query: 168 VGLDSLEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTP 225
L LE L L++N ++ + I LP L I +H NP CDC++ RW+ KT
Sbjct: 331 FRLPKLESLMLNSNALSALYHGTIESLPN-LKEISIHSNPIRCDCVI----RWMNMNKTN 385
Query: 226 MA-IDP---ICSVPPRLSSVTIKQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCK 277
+ ++P C PP ++Q+ ++ C P I P +F L ++ G VS C+
Sbjct: 386 IRFMEPDSLFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSNLNVEAGSYVSFHCR 445
Query: 278 VSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVC 337
+A P+ +I W+ P + + + + Y EGT L I + G + C
Sbjct: 446 ATAEPQPEIYWI---TPSGQKLLPNTLTDKFYVHSEGT------LDINGVTPKEGGLYTC 496
Query: 338 VAENQAGSTSSNYTIRI 354
+A N G+ + I++
Sbjct: 497 IATNLVGADLKSVMIKV 513
Score = 172 (65.6 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 46/133 (34%), Positives = 72/133 (54%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L NLQ++Y++ +S I AF GL NL+ L + N LQ + S F P+L L + N
Sbjct: 139 LSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLEILMIGEN 198
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
PI +IK F+PL L +L ++ + I D A VGL++LE + +N++ + +
Sbjct: 199 PIIRIKDMNFKPLINLRSLVIAGINLTEIPDNALVGLENLESISFYDNRLIKVPHVALQK 258
Query: 194 T-GLHGIDLHHNP 205
L +DL+ NP
Sbjct: 259 VVNLKFLDLNKNP 271
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 65/233 (27%), Positives = 103/233 (44%)
Query: 8 IATIIKIVSA---CPTSCICK---WKGGKQ------TVECVNKSLITVVEGMDPNTQVLD 55
I T+++ V CP C C+ W + TV+C + L+T + NTQ+L
Sbjct: 16 ITTLVQAVDKKVDCPRLCTCEIRPWFTPRSIYMEASTVDCNDLGLLTFPARLPANTQILL 75
Query: 56 YTGNNL-KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
NN+ K ++ F VNL + LS+ +S + + + + L+ + N L +
Sbjct: 76 LQTNNIAKIEYSTDFP----VNLTGLDLSQNNLSSVTNINVKKMPQLLSVYLEENKLTEL 131
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE 174
P + +L +L ++ N + I GAF L L+ L L+ +++I F L +LE
Sbjct: 132 PEKCLSELSNLQELYINHNLLSTISPGAFIGLHNLLRLHLNSNRLQMINSKWFDALPNLE 191
Query: 175 WLKLDNNKITTISGSNILPT-GLH-----GIDLHHNPWTCDCLLIGLRRWLES 221
L + N I I N P L GI+L P D L+GL LES
Sbjct: 192 ILMIGENPIIRIKDMNFKPLINLRSLVIAGINLTEIP---DNALVGLEN-LES 240
>UNIPROTKB|Q6PJG9 [details] [associations]
symbol:LRFN4 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 4" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
SMART:SM00060 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000237343
HOVERGEN:HBG052352 EMBL:BC000207 EMBL:BC015581 EMBL:BC027475
EMBL:BC094813 EMBL:AB209005 IPI:IPI00172530 RefSeq:NP_076941.2
UniGene:Hs.209979 UniGene:Hs.714189 ProteinModelPortal:Q6PJG9
SMR:Q6PJG9 STRING:Q6PJG9 PhosphoSite:Q6PJG9 DMDM:62286924
PaxDb:Q6PJG9 PRIDE:Q6PJG9 Ensembl:ENST00000309602 GeneID:78999
KEGG:hsa:78999 UCSC:uc001ojq.1 CTD:78999 GeneCards:GC11P066625
HGNC:HGNC:28456 MIM:612810 neXtProt:NX_Q6PJG9 PharmGKB:PA134922153
eggNOG:NOG246097 InParanoid:Q6PJG9 KO:K16357 OMA:PHGGNGS
OrthoDB:EOG4GTKCM PhylomeDB:Q6PJG9 GenomeRNAi:78999 NextBio:67607
ArrayExpress:Q6PJG9 Bgee:Q6PJG9 CleanEx:HS_LRFN4
Genevestigator:Q6PJG9 GermOnline:ENSG00000173621 Uniprot:Q6PJG9
Length = 635
Score = 224 (83.9 bits), Expect = 5.2e-15, P = 5.2e-15
Identities = 94/381 (24%), Positives = 157/381 (41%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+ + +ACP C+C+ + C ++ L+ V +D T L N ++ L
Sbjct: 6 LLLLLASGAAACPLPCVCQNLSESLSTLCAHRGLLFVPPNVDRRTVELRLADNFIQALGP 65
Query: 67 EKFQKM-GLVNL---------------------QKIYLSRCRISVIDSKAFRGLTNLVDL 104
F+ M GLV+L + ++L R+ + + + RG NL L
Sbjct: 66 PDFRNMTGLVDLTLSRNAITRIGARAFGDLESLRSLHLDGNRLVELGTGSLRGPVNLQHL 125
Query: 105 DFSHNVLQTVPSDTFPDY-PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIE 163
S N L + F D+ SL L LS N ++Q+ + L TL L I+ +
Sbjct: 126 ILSGNQLGRIAPGAFDDFLESLEDLDLSYNNLRQVPWAGIGAMPALHTLNLDHNLIDALP 185
Query: 164 DAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHG--------IDLHHNPWTCDCLLIGL 215
AF L L L L +N++ T++ + G + NP C+C L+
Sbjct: 186 PGAFAQLGQLSRLDLTSNRLATLAPDPLFSRGRDAEASPAPLVLSFSGNPLHCNCELL-- 243
Query: 216 RRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQ-ITPSTFYLEIQEGKNVSL 274
WL P ++ C+ PP L+ + E +CEP I T L + EG+ +L
Sbjct: 244 --WLRRLARPDDLET-CASPPGLAGRYFWAVPEGEFSCEPPLIARHTQRLWVLEGQRATL 300
Query: 275 LCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGT 334
C+ P + W+ G P ++ + + S A + GT L I + D G
Sbjct: 301 RCRALGDPAPTMHWV--G-P--DDRLVGNSSRA-RAFPNGT------LEIGVTGAGDAGG 348
Query: 335 FVCVAENQAGSTSSNYTIRIV 355
+ C+A N AG ++ +R++
Sbjct: 349 YTCIATNPAGEATARVELRVL 369
>ZFIN|ZDB-GENE-061026-3 [details] [associations]
symbol:nyx "nyctalopin" species:7955 "Danio rerio"
[GO:0007634 "optokinetic behavior" evidence=IMP] [GO:0007601
"visual perception" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061026-3 GO:GO:0007601 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 GO:GO:0007634 CTD:60506
HOGENOM:HOG000230477 HOVERGEN:HBG031762 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W GeneTree:ENSGT00690000101803 EMBL:BX545856
EMBL:BC163107 EMBL:BC163110 EMBL:DQ201193 IPI:IPI00508128
RefSeq:NP_001071085.1 UniGene:Dr.82636 Ensembl:ENSDART00000088569
GeneID:568821 KEGG:dre:568821 InParanoid:Q00P20 NextBio:20889357
Uniprot:Q00P20
Length = 469
Score = 221 (82.9 bits), Expect = 5.6e-15, P = 5.6e-15
Identities = 65/214 (30%), Positives = 103/214 (48%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL +L+ + L RI+VI +AF+ L L + + N+L +P F +L L L
Sbjct: 199 LGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLNDNLLVDLPQQAFKGLSNLKMLNLG 258
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
GN + + F L L L L + + IED +F L SL L L++N +T++ S
Sbjct: 259 GNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFENLTSLITLHLNSNNLTSLPFSVF 318
Query: 192 LPTGLHG-IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDE 250
P G + L NPW C C L LR W+ES K + D C+ P ++ + + ++
Sbjct: 319 QPIYFIGRLYLFRNPWECTCDLEWLREWMESYK--LVRDIPCASPSSVAGLDLSEVVFAH 376
Query: 251 L--AC--EPQITPSTFYLEIQ--EGKNVSLLCKV 278
L C P++ +T + E K SL+ K+
Sbjct: 377 LNSTCLDPPELNMTTSLPDYPTVENKFNSLISKL 410
Score = 128 (50.1 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 48/190 (25%), Positives = 89/190 (46%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP +C C + +V C + +++ + + ++ N+LK L F L +
Sbjct: 27 SCPPTCTCTQEKSC-SVLCDHVNMMDLPKEFPCEASSINLDKNSLKFLSERAFGT--LPS 83
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYPSLMKLTLSGNPI 135
L+ + L IS I AF+GL NLV+L +HN ++ + + TF L++L LS +
Sbjct: 84 LKTLSLKYNNISFITPGAFKGLPNLVELKMAHNEYIRYLHTRTFTALKRLVRLDLSDCNL 143
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-T 194
+ F L L + + A G+++L + L+ NKI ++ +++L T
Sbjct: 144 FNMPDRIFLEQITLKELLCFQNNFRRVP-GALRGMENLTHVYLERNKIEAVAYNSLLGLT 202
Query: 195 GLHGIDLHHN 204
L ++L N
Sbjct: 203 SLKYLNLQEN 212
Score = 125 (49.1 bits), Expect = 0.00020, P = 0.00020
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
G+ NL +YL R +I + + GLT+L L+ N + + + F D L L+
Sbjct: 176 GMENLTHVYLERNKIEAVAYNSLLGLTSLKYLNLQENRINVIHDEAFKDLIRLENFYLND 235
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNI 191
N + + AF+ LS L L L + + F L LE L LD N+++ I GS
Sbjct: 236 NLLVDLPQQAFKGLSNLKMLNLGGNLLTNVSKTWFSDLVELEVLYLDRNRLSYIEDGSFE 295
Query: 192 LPTGLHGIDLHHN 204
T L I LH N
Sbjct: 296 NLTSL--ITLHLN 306
Score = 119 (46.9 bits), Expect = 0.00089, P = 0.00089
Identities = 39/142 (27%), Positives = 68/142 (47%)
Query: 46 GMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDL 104
G P+ + L NN+ + F+ GL NL ++ ++ I + ++ F L LV L
Sbjct: 79 GTLPSLKTLSLKYNNISFITPGAFK--GLPNLVELKMAHNEYIRYLHTRTFTALKRLVRL 136
Query: 105 DFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIED 164
D S L +P F + +L +L N +++ GA + + L + L + IE +
Sbjct: 137 DLSDCNLFNMPDRIFLEQITLKELLCFQNNFRRVP-GALRGMENLTHVYLERNKIEAVAY 195
Query: 165 AAFVGLDSLEWLKLDNNKITTI 186
+ +GL SL++L L N+I I
Sbjct: 196 NSLLGLTSLKYLNLQENRINVI 217
>MGI|MGI:2442298 [details] [associations]
symbol:Lingo2 "leucine rich repeat and Ig domain containing
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2442298 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR025875 Pfam:PF12799
HSSP:Q15772 eggNOG:NOG278536 GeneTree:ENSGT00690000101682
HOGENOM:HOG000246971 HOVERGEN:HBG057546 CTD:158038 OMA:DQDSGMY
OrthoDB:EOG4NS3B7 EMBL:AK035778 EMBL:AK045639 EMBL:AK141568
EMBL:BC090619 EMBL:BC145692 IPI:IPI00341267 RefSeq:NP_001159471.1
RefSeq:NP_001159472.1 RefSeq:NP_001159473.1 RefSeq:NP_780725.2
UniGene:Mm.132507 ProteinModelPortal:Q3URE9 SMR:Q3URE9
PhosphoSite:Q3URE9 PaxDb:Q3URE9 PRIDE:Q3URE9
Ensembl:ENSMUST00000065173 Ensembl:ENSMUST00000098151
Ensembl:ENSMUST00000108122 Ensembl:ENSMUST00000108124
Ensembl:ENSMUST00000164772 GeneID:242384 KEGG:mmu:242384
InParanoid:Q3URE9 NextBio:385317 Bgee:Q3URE9 CleanEx:MM_LINGO2
Genevestigator:Q3URE9 Uniprot:Q3URE9
Length = 606
Score = 223 (83.6 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 81/310 (26%), Positives = 136/310 (43%)
Query: 60 NLKTLHNEKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + F+++ L NL+ Y + ++ + + GL NL L ++ L TVP
Sbjct: 212 NINNMPVYAFKRLFHLKNLEIDYWPL--LDLMPANSLYGL-NLTSLSITNTNLSTVPFLA 268
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F L L LS NPI I+ G F L L L + + IE +F GL L L +
Sbjct: 269 FKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQLRTIEPHSFQGLRFLRVLNV 328
Query: 179 DNNKITTISGSNIL--PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI---DPICS 233
N + T+ N+ P L + +++NP CDC L+ WL + + P+C+
Sbjct: 329 SQNLLETLE-ENVFSSPRALEVLSINNNPLACDCRLL----WLLQRQPNLQFGGQQPMCA 383
Query: 234 VPPRLSSVTIKQLSIDELA----CE-PQITPSTF-YLEIQEGKNVSLLCKVSAIPEAKIT 287
P + + K L+ C+ P+I +L + EG+ V L C P+ I+
Sbjct: 384 GPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHLLVDEGQTVQLECNADGDPQPVIS 443
Query: 288 WLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
W+ P + + S A + EI+ ++ D+G +VC+A N AG+ +
Sbjct: 444 WV---TPRRRFITTKSNGRATVLGDGTLEIRFAQ-------DQDSGMYVCIASNAAGNDT 493
Query: 348 SNYTIRIVLK 357
+T + +K
Sbjct: 494 --FTASLTVK 501
Score = 203 (76.5 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 60/185 (32%), Positives = 95/185 (51%)
Query: 6 FL-IATIIKIVSA---CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNL 61
FL +A ++ ++ + CP C C + ++V C + L+ + EG+ T++LD + N L
Sbjct: 12 FLGLAVVLLLMGSTIGCPARCECSAQN--KSVSCHRRRLLAIPEGIPIETKILDLSKNRL 69
Query: 62 KTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPD 121
K+++ E+F L L++I LS I+ ++ AF L NL L N L+ VP F
Sbjct: 70 KSINPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTG 127
Query: 122 YPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+L KL +S N I + FQ L L +LE+ + I AF GL SLE L L+
Sbjct: 128 LSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKC 187
Query: 182 KITTI 186
+T +
Sbjct: 188 NLTAV 192
Score = 128 (50.1 bits), Expect = 0.00014, P = 0.00014
Identities = 33/106 (31%), Positives = 56/106 (52%)
Query: 82 LSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTG 141
LS+ R+ I+ + F L ++D S N++ V F + +L L L GN +K + G
Sbjct: 64 LSKNRLKSINPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLG 123
Query: 142 AFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
F LS L L++S+ I ++ D F L +L+ L++ +N + IS
Sbjct: 124 VFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYIS 169
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 39/138 (28%), Positives = 59/138 (42%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P + +D + N + + F L NL+ + L R+ ++ F GL+NL LD S
Sbjct: 81 PLLEEIDLSDNIIANVEPGAFNN--LFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISE 138
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L L L L KC + + A
Sbjct: 139 NKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALS 198
Query: 169 GLDSLEWLKLDNNKITTI 186
L SL L L + I +
Sbjct: 199 HLRSLIALHLKHLNINNM 216
>RGD|71066 [details] [associations]
symbol:Lrrn3 "leucine rich repeat neuronal 3" species:10116
"Rattus norvegicus" [GO:0001934 "positive regulation of protein
phosphorylation" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IDA] [GO:0032403
"protein complex binding" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:71066
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0032403 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0001934 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0030131
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914 HOVERGEN:HBG052361
CTD:54674 OrthoDB:EOG4MGS6W EMBL:AF291437 EMBL:BC081791
IPI:IPI00192491 PIR:JC7763 RefSeq:NP_110483.1 UniGene:Rn.39124
ProteinModelPortal:Q9ESY6 STRING:Q9ESY6 PRIDE:Q9ESY6
Ensembl:ENSRNOT00000008655 GeneID:81514 KEGG:rno:81514
UCSC:RGD:71066 eggNOG:NOG294135 InParanoid:Q9ESY6 NextBio:615003
Genevestigator:Q9ESY6 GermOnline:ENSRNOG00000006368 Uniprot:Q9ESY6
Length = 707
Score = 224 (83.9 bits), Expect = 6.4e-15, P = 6.4e-15
Identities = 80/309 (25%), Positives = 136/309 (44%)
Query: 58 GNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
G NL + ++ +GL NL+ I R++ + A + NL LD + N + +
Sbjct: 221 GINLTEVPDDAL--VGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNPINRIRRG 278
Query: 118 TFPDYPSLMKLTLSGNP-IKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLDSLEW 175
F + L +L ++ P + I + A L L +E + + I AF L LE
Sbjct: 279 DFSNMLHLKELGINNMPELVSIDSLAVDNLPDLRKIEATNNPRLSYIHPNAFFRLPKLES 338
Query: 176 LKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDP-- 230
L L++N ++ + I LP L I +H NP CDC++ RW+ KT + ++P
Sbjct: 339 LMLNSNALSALYHGTIESLPN-LKEISIHSNPIRCDCVI----RWINMNKTNIRFMEPDS 393
Query: 231 -ICSVPPRLSSVTIKQLSIDELA--CEPQITPSTF--YLEIQEGKNVSLLCKVSAIPEAK 285
C PP ++Q+ ++ C P I P +F L+++ VSL C+ +A P+ +
Sbjct: 394 LFCVDPPEFQGQNVRQVHFRDMMEICLPLIAPESFPSILDVEADSYVSLHCRATAEPQPE 453
Query: 286 ITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
I W+ P + + Y EGT L I + G + C+A N G+
Sbjct: 454 IYWI---TPSGKRLLPNTLREKFYVHSEGT------LDIRGITPKEGGLYTCIATNLVGA 504
Query: 346 TSSNYTIRI 354
+ I++
Sbjct: 505 DLKSIMIKV 513
Score = 189 (71.6 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 58/171 (33%), Positives = 88/171 (51%)
Query: 37 NKSLITVVEGMDPNTQVLD-YTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAF 95
N S +T + + +Q+L Y N T EK GL NLQ++Y++ +S I AF
Sbjct: 103 NLSSVTNIN-VQKMSQLLSVYLEENKLTELPEKCL-YGLSNLQELYVNHNLLSAISPGAF 160
Query: 96 RGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELS 155
GL NL+ L + N LQ + S F P+L L L NPI +IK FQPL L +L ++
Sbjct: 161 VGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIKDMNFQPLLKLRSLVIA 220
Query: 156 KCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLHGIDLHHNP 205
+ + D A VGL++LE + +N++ + + L +DL+ NP
Sbjct: 221 GINLTEVPDDALVGLENLESISFYDNRLNKVPQVALQKAVNLKFLDLNKNP 271
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 60/220 (27%), Positives = 97/220 (44%)
Query: 18 CPTSCICK---WKGGKQ------TVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL-HNE 67
CP C C+ W + TV+C + L+ + +TQ+L NN+ + H+
Sbjct: 29 CPQLCTCEIRPWFTPRSIYMEASTVDCNDLGLLNFPARLPADTQILLLQTNNIARIEHST 88
Query: 68 KFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMK 127
F VNL + LS+ +S + + + ++ L+ + N L +P +L +
Sbjct: 89 DFP----VNLTGLDLSQNNLSSVTNINVQKMSQLLSVYLEENKLTELPEKCLYGLSNLQE 144
Query: 128 LTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
L ++ N + I GAF L L+ L L+ +++I F L +LE L L +N I I
Sbjct: 145 LYVNHNLLSAISPGAFVGLHNLLRLHLNSNRLQMINSKWFEALPNLEILMLGDNPILRIK 204
Query: 188 GSNILPT------GLHGIDLHHNPWTCDCLLIGLRRWLES 221
N P + GI+L P D L+GL LES
Sbjct: 205 DMNFQPLLKLRSLVIAGINLTEVP---DDALVGLEN-LES 240
>RGD|620810 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10116 "Rattus
norvegicus" [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0009986 "cell surface" evidence=IEA;ISO]
[GO:0031225 "anchored to membrane" evidence=IEA] [GO:0050771
"negative regulation of axonogenesis" evidence=TAS]
InterPro:IPR001611 PROSITE:PS51450 RGD:620810 GO:GO:0005783
GO:GO:0005886 GO:GO:0009986 GO:GO:0031225 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GO:GO:0050771 GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 OrthoDB:EOG4MGS7M
EMBL:AY028438 EMBL:AF462390 IPI:IPI00197503 RefSeq:NP_446065.1
UniGene:Rn.229952 PDB:3KJ4 PDBsum:3KJ4 ProteinModelPortal:Q99M75
SMR:Q99M75 MINT:MINT-243866 STRING:Q99M75
Ensembl:ENSRNOT00000051037 GeneID:113912 KEGG:rno:113912
InParanoid:Q99M75 EvolutionaryTrace:Q99M75 NextBio:618010
Genevestigator:Q99M75 GermOnline:ENSRNOG00000030920 Uniprot:Q99M75
Length = 473
Score = 220 (82.5 bits), Expect = 7.4e-15, P = 7.4e-15
Identities = 71/240 (29%), Positives = 110/240 (45%)
Query: 54 LDYTGN-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD + N L+ + F+ GL +L ++L RC + + FRGL L L N LQ
Sbjct: 110 LDLSDNAQLRVVDPTTFR--GLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ 167
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+P +TF D +L L L GN I + AF+ L L L L + + + AF L
Sbjct: 168 ALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGR 227
Query: 173 LEWLKLDNNKITTISGSNILPT-GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L N ++ + ++P L + L+ NPW CDC L WL+ + + P
Sbjct: 228 LMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP- 286
Query: 232 CSVPPRLSSVTIKQLSIDEL-ACEPQITP----STFYLEIQEGKNVSLLCKVSAIPEAKI 286
C++P RL+ +K+L+ +L C P T L +E + C+ A +A +
Sbjct: 287 CNLPQRLAGRDLKRLAASDLEGCAVASGPFRPFQTNQLTDEELLGLPKCCQPDAADKASV 346
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 59/208 (28%), Positives = 96/208 (46%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ W+ + ++ + CP +C+C + K T C + L V G+ ++Q + GN
Sbjct: 11 LLAWVLWLQAW-RVATPCPGACVC-YNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNR 68
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTF 119
+ + FQ NL ++L ++ ID+ AF GLT L LD S N L+ V TF
Sbjct: 69 ISYVPAASFQSCR--NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTF 126
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L ++++ G F+ L+ L L L ++ + D F L +L L L
Sbjct: 127 RGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 186
Query: 180 NNKITTISGSNILPTGLHGID---LHHN 204
N+I ++ GLH +D LH N
Sbjct: 187 GNRIPSVPEHAF--RGLHSLDRLLLHQN 212
Score = 139 (54.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 49/157 (31%), Positives = 78/157 (49%)
Query: 41 ITVVEGMD--PNTQ--VLDYT---G-NNLKTLHNEK--FQKMG------LVNLQKIYLSR 84
+T++E +D N Q V+D T G +L TLH ++ Q++G L LQ +YL
Sbjct: 104 LTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQD 163
Query: 85 CRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQ 144
+ + FR L NL L N + +VP F SL +L L N + ++ AF+
Sbjct: 164 NNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFR 223
Query: 145 PLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
L L+TL L + ++ V L SL++L+L++N
Sbjct: 224 DLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDN 260
>FB|FBgn0034540 [details] [associations]
symbol:Lrt "Leucine-rich tendon-specific protein"
species:7227 "Drosophila melanogaster" [GO:0016021 "integral to
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:2001282 "negative regulation of muscle cell chemotaxis toward
tendon cell" evidence=IMP] [GO:0005927 "muscle tendon junction"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043234 "protein complex" evidence=IPI] [GO:2001283 "Roundabout
signaling pathway involved in muscle cell chemotaxis toward tendon
cell" evidence=IGI] InterPro:IPR001611 PROSITE:PS51450
EMBL:AE013599 GO:GO:0016021 GO:GO:0005886 GO:GO:0043234
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0005927 GeneTree:ENSGT00690000101816 RefSeq:NP_611506.2
UniGene:Dm.22099 ProteinModelPortal:A1ZBX8 SMR:A1ZBX8
EnsemblMetazoa:FBtr0302284 GeneID:37342 KEGG:dme:Dmel_CG11136
UCSC:CG11136-RA CTD:37342 FlyBase:FBgn0034540 eggNOG:NOG299525
InParanoid:A1ZBX8 OMA:PIHCESK OrthoDB:EOG48KPT1 GenomeRNAi:37342
NextBio:803193 Bgee:A1ZBX8 GO:GO:2001282 GO:GO:2001283
Uniprot:A1ZBX8
Length = 808
Score = 224 (83.9 bits), Expect = 8.0e-15, P = 8.0e-15
Identities = 58/203 (28%), Positives = 95/203 (46%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD NNL +E+ G+ NL+ + L+R I I +KA + LV L HN +
Sbjct: 304 LDLQANNLNGPLSEQTLP-GMRNLESLNLNRNLIKSIQNKALANFSRLVSLSLRHNQIDV 362
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ F +L L LS N I I + + Q LS L L+L+ + + L SL
Sbjct: 363 LQDHAFFGLGALDSLDLSYNGIVAISSASLQHLSRLTVLDLTHNFLRALTSDLIAPLPSL 422
Query: 174 EWLKLDNNKITTISGSNILPTG--LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L+L N I+ ++ N + L + + NP +CDC + WL+ ++ ++
Sbjct: 423 RELRLAGNDISIVA-RNAMDGARELESLQMQENPLSCDCSIRPFAEWLQESQLHSSLSAS 481
Query: 232 CSVPPRLSSVTIKQLSIDELACE 254
C PPRL + Q+ ++ L+C+
Sbjct: 482 CVTPPRLEGAPLLQVPVETLSCD 504
Score = 135 (52.6 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/132 (33%), Positives = 62/132 (46%)
Query: 53 VLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTN-LVDLDFSHNVL 111
+LD + N+ L + K V+L + +S I + AF G+ L L N L
Sbjct: 156 LLDCSLRNVTFLSDAKI--FDNVSLHGLVISSGEIKRVHKSAFLGIRGPLQALGLPGNAL 213
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+VP + +L +L L+ N IK + T F L+ LV LELS I I FV L
Sbjct: 214 MSVPWNALSTLSALERLDLANNKIKALGTADFVGLTSLVYLELSNNQISSISQRTFVNLR 273
Query: 172 SLEWLKLDNNKI 183
LE LKL N++
Sbjct: 274 KLEVLKLGGNRL 285
>MGI|MGI:2136886 [details] [associations]
symbol:Rtn4r "reticulon 4 receptor" species:10090 "Mus
musculus" [GO:0005515 "protein binding" evidence=IPI] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0007409 "axonogenesis"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0031225 "anchored to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2136886
GO:GO:0005783 GO:GO:0005886 GO:GO:0009986 GO:GO:0031225
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101803 HOGENOM:HOG000116109
HOVERGEN:HBG063707 CTD:65078 KO:K16659 EMBL:AF283462 EMBL:BC052317
EMBL:BC058381 IPI:IPI00121067 RefSeq:NP_075358.1 UniGene:Mm.40149
ProteinModelPortal:Q99PI8 SMR:Q99PI8 MINT:MINT-188355 STRING:Q99PI8
PRIDE:Q99PI8 Ensembl:ENSMUST00000059589 GeneID:65079 KEGG:mmu:65079
UCSC:uc007ymv.1 InParanoid:Q99PI8 OMA:PLWAWLQ OrthoDB:EOG4MGS7M
NextBio:320259 Bgee:Q99PI8 CleanEx:MM_RTN4R Genevestigator:Q99PI8
GermOnline:ENSMUSG00000043811 Uniprot:Q99PI8
Length = 473
Score = 218 (81.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 66/220 (30%), Positives = 102/220 (46%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL +L ++L RC + + FRGL L L N LQ +P +TF D +L L L G
Sbjct: 128 GLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHG 187
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N I + AF+ L L L L + + + AF L L L L N ++ + ++
Sbjct: 188 NRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLM 247
Query: 193 PT-GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
P L + L+ NPW CDC L WL+ + + P C++P RL+ +K+L+ +L
Sbjct: 248 PLRSLQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVP-CNLPQRLADRDLKRLAASDL 306
Query: 252 -ACEPQITP----STFYLEIQEGKNVSLLCKVSAIPEAKI 286
C P T L +E ++ C+ A +A +
Sbjct: 307 EGCAVASGPFRPIQTSQLTDEELLSLPKCCQPDAADKASV 346
Score = 189 (71.6 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 59/208 (28%), Positives = 95/208 (45%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
++ W+ + ++ + CP +C+C + K T C + L V G+ ++Q + GN
Sbjct: 11 LLAWVLWLQAW-RVATPCPGACVC-YNEPKVTTSCPQQGLQAVPTGIPASSQRIFLHGNR 68
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTF 119
+ + FQ NL ++L ++ ID+ AF GLT L LD S N L V TF
Sbjct: 69 ISHVPAASFQSCR--NLTILWLHSNALARIDAAAFTGLTLLEQLDLSDNAQLHVVDPTTF 126
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L ++++ G F+ L+ L L L ++ + D F L +L L L
Sbjct: 127 HGLGHLHTLHLDRCGLRELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLH 186
Query: 180 NNKITTISGSNILPTGLHGID---LHHN 204
N+I ++ GLH +D LH N
Sbjct: 187 GNRIPSVPEHAF--RGLHSLDRLLLHQN 212
>UNIPROTKB|I3LFJ7 [details] [associations]
symbol:NYX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:CU582950
Ensembl:ENSSSCT00000023085 Uniprot:I3LFJ7
Length = 477
Score = 218 (81.8 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 59/190 (31%), Positives = 92/190 (48%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL L+ + L R+ + AFR +L L + N+L +P+D F L L L
Sbjct: 199 LGLRRLRSLSLQANRVRTVHGGAFRDCGSLEHLLLNDNLLAALPADAFHGLRHLRTLNLG 258
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
GN + ++ F L+ L L L + I +E+ AF L L L L+ N +T ++ +
Sbjct: 259 GNALGRVARAWFAELAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNHLTMLAWAAF 318
Query: 192 LPTGLHG-IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL---- 246
P G + L NPW CDC L LR W+ES A D C+ P ++ + ++Q+
Sbjct: 319 QPGFFLGHLFLFRNPWRCDCRLEWLRDWMESFGR--AADVPCASPGSVAGLDLRQVAFGH 376
Query: 247 SIDELACEPQ 256
S D L +P+
Sbjct: 377 SSDGLCVDPE 386
Score = 145 (56.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 46/136 (33%), Positives = 62/136 (45%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL NL +L R RI + S + GL L L N ++TV F D SL L L+
Sbjct: 176 GLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQANRVRTVHGGAFRDCGSLEHLLLND 235
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNI 191
N + + AF L +L TL L + + A F L LE L LD N I + G+
Sbjct: 236 NLLAALPADAFHGLRHLRTLNLGGNALGRVARAWFAELAELELLYLDRNSIAFVEEGAFQ 295
Query: 192 LPTGLHGIDLHHNPWT 207
+GL + L+ N T
Sbjct: 296 NLSGLLALHLNGNHLT 311
Score = 120 (47.3 bits), Expect = 0.00071, P = 0.00071
Identities = 45/178 (25%), Positives = 75/178 (42%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
SACP +C+C +V C L+ V +D N L+ L F L
Sbjct: 25 SACPAACVCSSVERGCSVRCDRAGLLRVPAEFPCEAASIDLDRNGLRFLGERAFGT--LP 82
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYPSLMKLTLSGNP 134
+L+++ L +S I AF+GL L +L +HN L+ + + TF L +L L+
Sbjct: 83 SLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHNGDLRYLHARTFAALGRLRRLDLAACR 142
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
+ + L L L + A GL +L L+ ++I ++ S++L
Sbjct: 143 LFSVPERLLAELPALRELAAFDNLFRRVP-GALRGLANLTHAHLERSRIEAVASSSLL 199
>UNIPROTKB|Q7L985 [details] [associations]
symbol:LINGO2 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 EMBL:CH471071
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 eggNOG:NOG278536 HOGENOM:HOG000246971
HOVERGEN:HBG057546 EMBL:AY358114 EMBL:AK056372 EMBL:AK172834
EMBL:AK290972 EMBL:BC137514 IPI:IPI00001120 RefSeq:NP_001245211.1
RefSeq:NP_689783.1 UniGene:Hs.662661 UniGene:Hs.739574
ProteinModelPortal:Q7L985 SMR:Q7L985 STRING:Q7L985
PhosphoSite:Q7L985 DMDM:172046190 PaxDb:Q7L985 PRIDE:Q7L985
Ensembl:ENST00000308675 Ensembl:ENST00000379992 GeneID:158038
KEGG:hsa:158038 UCSC:uc003zqu.1 CTD:158038 GeneCards:GC09M027940
HGNC:HGNC:21207 HPA:CAB025361 HPA:HPA016633 MIM:609793
neXtProt:NX_Q7L985 PharmGKB:PA162394096 InParanoid:Q7L985
OMA:DQDSGMY OrthoDB:EOG4NS3B7 PhylomeDB:Q7L985 GenomeRNAi:158038
NextBio:87602 Bgee:Q7L985 CleanEx:HS_LINGO2 Genevestigator:Q7L985
Uniprot:Q7L985
Length = 606
Score = 220 (82.5 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 74/279 (26%), Positives = 124/279 (44%)
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPL 146
+ ++ + + GL NL L ++ L TVP F L L LS NPI I+ G F L
Sbjct: 238 LDMMPANSLYGL-NLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDL 296
Query: 147 SYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL--PTGLHGIDLHHN 204
L L + + IE +F GL L L + N + T+ N+ P L + +++N
Sbjct: 297 IRLQELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLE-ENVFSSPRALEVLSINNN 355
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA----CE-PQITP 259
P CDC L+ + + + T P+C+ P + + K L+ C+ P+I
Sbjct: 356 PLACDCRLLWILQ-RQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIRE 414
Query: 260 STF-YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIK 318
+L + EG+ V L C P+ I+W+ P + + S A + EI+
Sbjct: 415 KKLQHLLVDEGQTVQLECSADGDPQPVISWV---TPRRRFITTKSNGRATVLGDGTLEIR 471
Query: 319 KSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLK 357
++ D+G +VC+A N AG+ + +T + +K
Sbjct: 472 FAQ-------DQDSGMYVCIASNAAGNDT--FTASLTVK 501
Score = 204 (76.9 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 62/182 (34%), Positives = 92/182 (50%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
IF+ +TI CP C C + ++V C + LI + EG+ T++LD + N LK++
Sbjct: 20 IFMGSTI-----GCPARCECSAQN--KSVSCHRRRLIAIPEGIPIETKILDLSKNRLKSV 72
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ E+F L L++I LS I+ ++ AF L NL L N L+ VP F +
Sbjct: 73 NPEEFISYPL--LEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLGVFTGLSN 130
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L KL +S N I + FQ L L +LE+ + I AF GL SLE L L+ +T
Sbjct: 131 LTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLT 190
Query: 185 TI 186
+
Sbjct: 191 AV 192
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/109 (28%), Positives = 59/109 (54%)
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+NL + ++ +S + AF+ L L L+ S+N + T+ + F D L +L + G
Sbjct: 249 LNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQELHIVGAQ 308
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
++ I+ +FQ L +L L +S+ +E +E+ F +LE L ++NN +
Sbjct: 309 LRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPL 357
Score = 127 (49.8 bits), Expect = 0.00017, P = 0.00017
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 82 LSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTG 141
LS+ R+ ++ + F L ++D S N++ V F + +L L L GN +K + G
Sbjct: 64 LSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLVPLG 123
Query: 142 AFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
F LS L L++S+ I ++ D F L +L+ L++ +N + IS
Sbjct: 124 VFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYIS 169
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 39/138 (28%), Positives = 59/138 (42%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P + +D + N + + F L NL+ + L R+ ++ F GL+NL LD S
Sbjct: 81 PLLEEIDLSDNIIANVEPGAFNN--LFNLRSLRLKGNRLKLVPLGVFTGLSNLTKLDISE 138
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L L L L KC + + A
Sbjct: 139 NKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLEQLTLEKCNLTAVPTEALS 198
Query: 169 GLDSLEWLKLDNNKITTI 186
L SL L L + I +
Sbjct: 199 HLRSLISLHLKHLNINNM 216
>RGD|727812 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10116
"Rattus norvegicus" [GO:0004872 "receptor activity"
evidence=IEA;ISO;ISS] [GO:0007166 "cell surface receptor signaling
pathway" evidence=NAS] [GO:0009897 "external side of plasma
membrane" evidence=IDA] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0045121 "membrane raft" evidence=IDA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA;ISO;ISS;IDA] InterPro:IPR001611
PROSITE:PS51450 RGD:727812 GO:GO:0016021 GO:GO:0009897
InterPro:IPR003591 SMART:SM00369 GO:GO:0004872 GO:GO:0045121
GO:GO:0007166 InterPro:IPR000372 SMART:SM00013 GO:GO:0046658
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OrthoDB:EOG4FXR7G eggNOG:NOG254142
EMBL:AF532861 EMBL:AY311478 EMBL:BC129084 IPI:IPI00327090
IPI:IPI00734618 RefSeq:NP_852042.1 UniGene:Rn.22361
ProteinModelPortal:Q80WD0 Ensembl:ENSRNOT00000067414 GeneID:303311
KEGG:rno:303311 InParanoid:Q80WD0 NextBio:651118
ArrayExpress:Q80WD0 Genevestigator:Q80WD0
GermOnline:ENSRNOG00000003121 Uniprot:Q80WD0
Length = 445
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/209 (30%), Positives = 96/209 (45%)
Query: 54 LDYTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD N L+TL E FQ GLV L +YL +C +S + + F GL +L L N ++
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSSLPAGIFGGLHSLQYLYLQDNHIE 162
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ D F D +L L L GN + + G F+ L L L L + ++ + AF L
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLLHENQLQWVHHKAFHDLHR 222
Query: 173 LEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L NN +T + G + P L + L+ N W C C L WL + ++ P
Sbjct: 223 LTTLFLFNNSLTELQGDCLAPLVALEFLRLNGNAWDCGCRARSLWEWLRRFRGSSSVVP- 281
Query: 232 CSVPPRLSSVTIKQLSIDELA-CEPQITP 259
C+ P +K L +++ C +P
Sbjct: 282 CATPELRQGQDLKSLRVEDFRNCTGPASP 310
Score = 160 (61.4 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 58/204 (28%), Positives = 89/204 (43%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+A + + CP C+C TV C + + EG+ +++ + N++ L
Sbjct: 12 LLLLAGELPLSGGCPRDCVCY--PSPMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITFL 69
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYP 123
F +V L IY + I+ I F G +L +LD N L+T+ +TF
Sbjct: 70 QQGHFSP-AMVTLW-IYSNN--ITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLV 125
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + + G F L L L L IE ++D FV L +L L L NK+
Sbjct: 126 KLHALYLYKCGLSSLPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKL 185
Query: 184 TTISGSNILPTGLHGID---LHHN 204
++ G I GL +D LH N
Sbjct: 186 WSL-GQGIF-RGLVNLDRLLLHEN 207
>MGI|MGI:2661375 [details] [associations]
symbol:Rtn4rl1 "reticulon 4 receptor-like 1" species:10090
"Mus musculus" [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0009897 "external
side of plasma membrane" evidence=ISO] [GO:0009986 "cell surface"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0031103 "axon
regeneration" evidence=TAS] [GO:0031225 "anchored to membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=ISO] [GO:0046658
"anchored to plasma membrane" evidence=ISO] InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2661375 GO:GO:0016021 GO:GO:0009897
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0004872 GO:GO:0045121 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GO:GO:0031103 EMBL:AL603905
GeneTree:ENSGT00690000101803 CTD:146760 HOGENOM:HOG000116109
HOVERGEN:HBG063707 KO:K16660 OMA:NCTSHRN OrthoDB:EOG4FXR7G
EMBL:AY250218 EMBL:AK033286 EMBL:AK140456 EMBL:BC030471
EMBL:BK001304 IPI:IPI00169628 RefSeq:NP_808376.1 UniGene:Mm.82661
ProteinModelPortal:Q8K0S5 SMR:Q8K0S5 STRING:Q8K0S5 PRIDE:Q8K0S5
Ensembl:ENSMUST00000102514 GeneID:237847 KEGG:mmu:237847
UCSC:uc007kdh.1 eggNOG:NOG254142 InParanoid:Q8K0S5 NextBio:383518
Bgee:Q8K0S5 CleanEx:MM_RTN4RL1 Genevestigator:Q8K0S5
GermOnline:ENSMUSG00000045287 Uniprot:Q8K0S5
Length = 445
Score = 217 (81.4 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 64/209 (30%), Positives = 96/209 (45%)
Query: 54 LDYTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD N L+TL E FQ GLV L +YL +C +S + + F GL +L L N ++
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIE 162
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ D F D +L L L GN + + G F+ L L L L + ++ + AF L
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGQGIFRGLVNLDRLLLHENQLQWVHHKAFHDLHR 222
Query: 173 LEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L NN +T + G + P L + L+ N W C C L WL + + P
Sbjct: 223 LTTLFLFNNSLTELQGDCLAPLVALEFLRLNGNAWDCGCRARSLWEWLRRFRGSSSAVP- 281
Query: 232 CSVPPRLSSVTIKQLSIDELA-CEPQITP 259
C+ P +K L +++ C ++P
Sbjct: 282 CATPELRQGQDLKLLRVEDFRNCTGPVSP 310
Score = 157 (60.3 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 58/204 (28%), Positives = 88/204 (43%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+A + + CP C+C TV C + + EG+ +++ + N + L
Sbjct: 12 LLLLAGELPLGGGCPRDCVCY--PAPMTVSCQAHNFAAIPEGIPEDSERIFLQNNRITFL 69
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYP 123
F +V L IY + I+ I F G +L +LD N L+T+ +TF
Sbjct: 70 QQGHFSP-AMVTLW-IYSNN--ITFIAPNTFEGFVHLEELDLGDNRQLRTLAPETFQGLV 125
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + + G F L L L L IE ++D FV L +L L L NK+
Sbjct: 126 KLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKL 185
Query: 184 TTISGSNILPTGLHGID---LHHN 204
++ G I GL +D LH N
Sbjct: 186 WSL-GQGIF-RGLVNLDRLLLHEN 207
>ZFIN|ZDB-GENE-040924-5 [details] [associations]
symbol:lrit1a "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1a" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-040924-5 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG108105 EMBL:BC095674 IPI:IPI00498659 UniGene:Dr.82959
ProteinModelPortal:Q502J4 InParanoid:Q502J4 Uniprot:Q502J4
Length = 643
Score = 220 (82.5 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 82/306 (26%), Positives = 136/306 (44%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
K+ + + I I S+AF L+NL L S NVL ++ SD+F SL +L L GN +
Sbjct: 63 KLRIEKTAIKRIPSEAFSYLSNLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSF 122
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS------NIL 192
+ + L L++ + + A + + ++ +L L +N + T+ I
Sbjct: 123 PWESLMDMPSLRLLDIHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVPAEVLNTWLTIK 182
Query: 193 PT-GLHG----IDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPI--CSVPPRLSSVTIK 244
PT G + LH NPW CDC L L ++ +S +A ID C+ P LS V
Sbjct: 183 PTLGAESSKLILGLHDNPWLCDCRLYDLVQFQKSPSLSVAFIDTRLRCADPESLSGVLFS 242
Query: 245 QLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNESMSA 302
+ C+ P++ + + G NV L C P ++ W DG P+ +
Sbjct: 243 DAELRR--CQGPRVHTAVARVRSAVGNNVLLRCGTVGAPIPELAWRRADGKPLNGTVL-- 298
Query: 303 SESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVE 362
+ +++EG I S L + + D G ++C A N AGS + ++ I+ +E
Sbjct: 299 -----LENSKEG--IVWSILSVPAVSYRDTGKYICKATNYAGSAEAVISL-IINDAPKME 350
Query: 363 VVTVFP 368
T+ P
Sbjct: 351 NPTLDP 356
Score = 215 (80.7 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 83/291 (28%), Positives = 135/291 (46%)
Query: 16 SACPTSCICKWK----GGK-QTVECVNKSLITVVEGMDP-NTQVLDYTGNNLKTLHNEKF 69
S CPT C C + G + ++V C N I++V P +T L +K + +E F
Sbjct: 21 STCPTQCSCFYHNLSDGSRARSVIC-NDPEISLVPASFPGDTSKLRIEKTAIKRIPSEAF 79
Query: 70 QKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLT 129
+ NL+ +++S +S ++S +FRGL +L +L N L + P ++ D PSL L
Sbjct: 80 SYLS--NLEFLWMSFNVLSSLNSDSFRGLYSLEELRLDGNSLSSFPWESLMDMPSLRLLD 137
Query: 130 LSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS 189
+ N + + + A + + L+LS + + A V L++ WL + K T + S
Sbjct: 138 IHNNQLSSLPSEAALYMKNITYLDLSSNNLLTVP--AEV-LNT--WLTI---KPTLGAES 189
Query: 190 NILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPI--CSVPPRLSSVTIKQL 246
+ L GLH NPW CDC L L ++ +S +A ID C+ P LS V
Sbjct: 190 SKLILGLHD-----NPWLCDCRLYDLVQFQKSPSLSVAFIDTRLRCADPESLSGVLFSDA 244
Query: 247 SIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-FDGVPI 295
+ C+ P++ + + G NV L C P ++ W DG P+
Sbjct: 245 ELRR--CQGPRVHTAVARVRSAVGNNVLLRCGTVGAPIPELAWRRADGKPL 293
>ZFIN|ZDB-GENE-040310-3 [details] [associations]
symbol:rtn4rl1b "reticulon 4 receptor-like 1b"
species:7955 "Danio rerio" [GO:0005515 "protein binding"
evidence=IPI] ZFIN:ZDB-GENE-040310-3 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 HOGENOM:HOG000116109 HOVERGEN:HBG063707 KO:K16660
EMBL:BC163592 EMBL:AY263333 IPI:IPI00505158 RefSeq:NP_982347.1
UniGene:Dr.134948 SMR:Q6WZD2 IntAct:Q6WZD2 GeneID:403308
KEGG:dre:403308 CTD:403308 InParanoid:Q6WZD2 NextBio:20816917
Uniprot:Q6WZD2
Length = 478
Score = 217 (81.4 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 64/196 (32%), Positives = 94/196 (47%)
Query: 54 LDYTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD N L++L E F GL L ++L RC +S + + F+GL NL L N L+
Sbjct: 103 LDLGDNRYLRSLSAETFH--GLGRLHALHLYRCGLSALPNNIFQGLRNLQYLYLQDNHLE 160
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ D F D +L L L GN + + F+ L L L L ++ ++ AF L
Sbjct: 161 YLQDDLFVDLHNLSHLFLHGNRLWSLHQNTFRGLGALDRLLLHHNQLQWVDRLAFHDLRR 220
Query: 173 LEWLKLDNNKITTISGSNI--LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP 230
L L L NN +T ++G + LP L + L+ NPW CDC + L WL+ + +
Sbjct: 221 LTTLYLFNNSLTELAGECLTQLPA-LEYLRLNDNPWECDCKALSLWDWLKKFRGSTS-SV 278
Query: 231 ICSVPPRLSSVTIKQL 246
C P L+ +KQL
Sbjct: 279 GCVAPAELAGKDLKQL 294
Score = 167 (63.8 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 60/215 (27%), Positives = 96/215 (44%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHN 66
L+ +++ +CP CIC TV C + ++V EG+ P+++ + N + L
Sbjct: 12 LVLCGLELSWSCPRHCICYM--APSTVSCQAHNFLSVPEGIPPHSERIFLQNNKIHRLLQ 69
Query: 67 EKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYPSL 125
F V L IY + I+ I+ F+G T L +LD N L+++ ++TF L
Sbjct: 70 GHFSPT-TVTLW-IYSNN--ITYIEPSTFQGFTLLEELDLGDNRYLRSLSAETFHGLGRL 125
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L + + FQ L L L L +E ++D FV L +L L L N++ +
Sbjct: 126 HALHLYRCGLSALPNNIFQGLRNLQYLYLQDNHLEYLQDDLFVDLHNLSHLFLHGNRLWS 185
Query: 186 ISGSNILPTG-LHGIDLHHNP--WTCDCLLIGLRR 217
+ + G L + LHHN W LRR
Sbjct: 186 LHQNTFRGLGALDRLLLHHNQLQWVDRLAFHDLRR 220
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 223 (83.6 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 79/308 (25%), Positives = 133/308 (43%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L ++ L+ +S +D +F GL+ L L +N + + F SL L L N I
Sbjct: 313 LSELDLTFNHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEIS 372
Query: 137 ---QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ GAF L L L L I I AF GLD+LE L L +N I ++ G+
Sbjct: 373 WTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQ 432
Query: 194 TG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
L + L+ + CDC L L +W+ ++ C+ P L +I +S D
Sbjct: 433 MKKLQQLHLNTSSLLCDCQLKWLPQWVAENNFQSFVNASCAHPQLLKGRSIFAVSPDGFV 492
Query: 253 CE----PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT--WLFDGVPIQNESMSASESH 306
C+ PQIT +G N+S +C ++ ++ +T W D + + M E++
Sbjct: 493 CDDFPKPQITVQPETQSAIKGSNLSFICSAASSSDSPMTFAWKKDNELLHDAEM---ENY 549
Query: 307 AVYSTEEGTEIKKSELL-IYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVT 365
A + G ++ + +L + G + CV N GS+ Y+++ L + T
Sbjct: 550 AHLRAQGGEVMEYTTILRLREVEFASEGKYQCVISNHFGSS---YSVKAKLTVNMLPSFT 606
Query: 366 VFPLEYVL 373
P++ +
Sbjct: 607 KTPMDLTI 614
Score = 153 (58.9 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 74/300 (24%), Positives = 118/300 (39%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD T N+L L + F +GL L +++ R+S I AFRGL++L LD +N +
Sbjct: 316 LDLTFNHLSRLDDSSF--LGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISW 373
Query: 114 VPSD---TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGL 170
D F L +L L GN I+ I AF L L L+LS I ++ AF +
Sbjct: 374 TIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNAIMSLQGNAFSQM 433
Query: 171 DSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP 230
L+ L L+ + + LP W + +S P
Sbjct: 434 KKLQQLHLNTSSLLCDCQLKWLPQ-----------WVAE-------NNFQSFVNASCAHP 475
Query: 231 ICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT--W 288
+ +V+ D+ +PQIT +G N+S +C ++ ++ +T W
Sbjct: 476 QLLKGRSIFAVSPDGFVCDDFP-KPQITVQPETQSAIKGSNLSFICSAASSSDSPMTFAW 534
Query: 289 LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSS 348
D + + M + +H E E + L + G + CV N GS+ S
Sbjct: 535 KKDNELLHDAEME-NYAHLRAQGGEVMEYT-TILRLREVEFASEGKYQCVISNHFGSSYS 592
Score = 149 (57.5 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 45/164 (27%), Positives = 79/164 (48%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P Q L+ N +K + FQ +G L+ + + R ++ + AF GL+N+ L H
Sbjct: 215 PQLQHLELNRNKIKNVDGLTFQGLGA--LKSLKMQRNGVTKLMDGAFWGLSNMEILQLDH 272
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L + L +L LS N I +I A++ L L+L+ + ++D++F+
Sbjct: 273 NNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFL 332
Query: 169 GLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHNP--WTCD 209
GL L L + NN+++ I+ + L +DL +N WT +
Sbjct: 333 GLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIE 376
Score = 138 (53.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 40/125 (32%), Positives = 61/125 (48%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL N++ + L ++ I GL L +L S N + + D + L +L L+
Sbjct: 261 GLSNMEILQLDHNNLTEITKGWLYGLLMLQELHLSQNAINRISPDAWEFCQKLSELDLTF 320
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNI 191
N + ++ +F LS L TL + + I D AF GL SL+ L L NN+I+ TI N
Sbjct: 321 NHLSRLDDSSFLGLSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNEISWTIEDMNG 380
Query: 192 LPTGL 196
+GL
Sbjct: 381 AFSGL 385
Score = 111 (44.1 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/108 (29%), Positives = 62/108 (57%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
++ LS R+S I + + L +L ++ ++N L+T+P+ P ++ L+L+GN I +I
Sbjct: 78 RLDLSHNRLSFIKASSMSHLQSLREVKLNNNELETIPN-LGPVSANITLLSLAGNRIVEI 136
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
+ L TL+LS I ++ AF L L++L L++N++T++
Sbjct: 137 LPEHLKEFQSLETLDLSSNNISELQ-TAFPALQ-LKYLYLNSNRVTSM 182
Score = 97 (39.2 bits), Expect = 2.4e-11, Sum P(2) = 2.4e-11
Identities = 32/118 (27%), Positives = 52/118 (44%)
Query: 239 SSVTIK-QLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQN 297
SS ++K +L+++ L P T + L I+ G L C P +I W DG
Sbjct: 589 SSYSVKAKLTVNML---PSFTKTPMDLTIRAGAMARLECAAVGHPAPQIAWQKDG----G 641
Query: 298 ESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
A+ ++ E I + I+D G + C A+N AGS S+N T+ ++
Sbjct: 642 TDFPAARERRMHVMPED-----DVFFIVDVKIEDIGVYSCTAQNSAGSISANATLTVL 694
Score = 96 (38.9 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 45/177 (25%), Positives = 83/177 (46%)
Query: 36 VNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDS 92
+N + + + + P N +L GN + + E ++ +L+ + LS IS + +
Sbjct: 105 LNNNELETIPNLGPVSANITLLSLAGNRIVEILPEHLKEFQ--SLETLDLSSNNISELQT 162
Query: 93 KAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPIKQIKTGAFQPLSYLVT 151
AF L L L + N + ++ F + + L+ L L+ N I I F+ L L
Sbjct: 163 -AFPAL-QLKYLYLNSNRVTSMEPGYFDNLANTLLVLKLNRNRISAIPPKMFK-LPQLQH 219
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHNPWT 207
LEL++ I+ ++ F GL +L+ LK+ N +T + G+ + + + L HN T
Sbjct: 220 LELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEILQLDHNNLT 276
Score = 89 (36.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/81 (30%), Positives = 38/81 (46%)
Query: 52 QVLDYTGNNLK-TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV 110
+ LD N + T+ + GL L+++ L RI I KAF GL L LD S N
Sbjct: 362 KTLDLKNNEISWTIEDMNGAFSGLDKLRRLILQGNRIRSITKKAFTGLDALEHLDLSDNA 421
Query: 111 LQTVPSDTFPDYPSLMKLTLS 131
+ ++ + F L +L L+
Sbjct: 422 IMSLQGNAFSQMKKLQQLHLN 442
Score = 73 (30.8 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 20/90 (22%), Positives = 38/90 (42%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ +G+ L C P K+ W D P+ +E H + G ++ L+I
Sbjct: 708 VTKGETAVLQCIAGGSPPPKLNWTKDDSPLV-----VTERHFFAA---GNQL----LIIV 755
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+S++ D G + C N G+ N + ++
Sbjct: 756 DSDVSDAGKYTCEMSNTLGTERGNVRLSVI 785
>UNIPROTKB|Q13641 [details] [associations]
symbol:TPBG "Trophoblast glycoprotein" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=NAS] [GO:0005887 "integral to
plasma membrane" evidence=TAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005783 GO:GO:0005887 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 Pfam:PF01463 HOGENOM:HOG000013090
HOVERGEN:HBG053843 OrthoDB:EOG4SXNDB EMBL:Z29083 EMBL:AL121977
EMBL:AJ012159 EMBL:BC037161 IPI:IPI00009111 PIR:A53531
RefSeq:NP_001159864.1 RefSeq:NP_006661.1 UniGene:Hs.82128
ProteinModelPortal:Q13641 SMR:Q13641 IntAct:Q13641 MINT:MINT-230707
STRING:Q13641 PhosphoSite:Q13641 DMDM:73621980 PaxDb:Q13641
PeptideAtlas:Q13641 PRIDE:Q13641 Ensembl:ENST00000369750
Ensembl:ENST00000535040 Ensembl:ENST00000543496 GeneID:7162
KEGG:hsa:7162 UCSC:uc003pjn.4 CTD:7162 GeneCards:GC06P083072
HGNC:HGNC:12004 HPA:HPA010554 MIM:190920 neXtProt:NX_Q13641
PharmGKB:PA36685 eggNOG:NOG301461 InParanoid:Q13641 OMA:HNGTLAE
PhylomeDB:Q13641 GenomeRNAi:7162 NextBio:28026 ArrayExpress:Q13641
Bgee:Q13641 CleanEx:HS_TPBG Genevestigator:Q13641
GermOnline:ENSG00000146242 Uniprot:Q13641
Length = 420
Score = 146 (56.5 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L +L L+ N + L L L+LS + + +F L LE L L++N +
Sbjct: 212 LRRLELASNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESLHLEDNALK 271
Query: 185 TISGSNILPT-GL-H-GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSS 240
+ + GL H + L +NPW CDC + + WL+ T+ D + C+ P ++ +
Sbjct: 272 VLHNGTLAELQGLPHIRVFLDNNPWVCDCHMADMVTWLKETEVVQGKDRLTCAYPEKMRN 331
Query: 241 VTIKQLSIDELACEPQITPS 260
+ +L+ +L C+P + PS
Sbjct: 332 RVLLELNSADLDCDPILPPS 351
Score = 118 (46.6 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 33/95 (34%), Positives = 46/95 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKF-QKMGLVN 76
CP C C +TV+CVN++L V + + L TGN L L F ++ L
Sbjct: 62 CPALCECS--EAARTVKCVNRNLTEVPTDLPAYVRNLFLTGNQLAVLPAGAFARRPPLAE 119
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L + LS R+ + + AF L +L LD SHN L
Sbjct: 120 LAALNLSGSRLDEVRAGAFEHLPSLRQLDLSHNPL 154
>ZFIN|ZDB-GENE-040310-1 [details] [associations]
symbol:rtn4r "reticulon 4 receptor" species:7955
"Danio rerio" [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IGI;IMP] [GO:0007411 "axon guidance"
evidence=IGI;IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040310-1 GO:GO:0007411 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 GO:GO:0048936 HOGENOM:HOG000116109 HOVERGEN:HBG063707
CTD:65078 EMBL:AY257178 IPI:IPI00490487 RefSeq:NP_982345.1
UniGene:Dr.30202 ProteinModelPortal:Q6X3Y5 SMR:Q6X3Y5 GeneID:403306
KEGG:dre:403306 InParanoid:Q6X3Y5 NextBio:20816915 Uniprot:Q6X3Y5
Length = 479
Score = 221 (82.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 73/227 (32%), Positives = 106/227 (46%)
Query: 54 LDYTGN-NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD N NL+ + F+ GL L ++L RC +S + FRGL +L L N L
Sbjct: 110 LDIGDNSNLRIISPTAFR--GLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLL 167
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ DTF D +L L L N IK + + L L L L + I ++ AF L
Sbjct: 168 ALHEDTFLDLANLTYLFLHNNKIKVVTDHMLRGLVNLDRLLLHQNRIVHVQQQAFNDLSK 227
Query: 173 LEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L N +T ++G ++ P L + L+ N W CDC L W + K + D
Sbjct: 228 LTTLFLFFNNLTMLTGESMNPLVSLQYLRLNGNQWICDCRARPLWDWFKRFKGSSS-DLE 286
Query: 232 CSVPPRLSSVTIKQLSIDEL-AC--EP-QITPSTFYLEIQEGKNVSL 274
C +P L+ +K+L D+L C P Q+ S F ++ GK +SL
Sbjct: 287 CHLPASLNGKDLKRLKSDDLEGCVDSPSQVQTSIFNSKVHSGKFLSL 333
Score = 185 (70.2 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 55/208 (26%), Positives = 98/208 (47%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+M+W+ ++ ++++CP C+C + K TV C + L ++ + +Q + N
Sbjct: 14 LMFWL----NLVPVINSCPAKCVC-YSEPKATVACQQQGLFSIPTEIPVRSQRIFLQSNK 68
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTF 119
L + + F + NL +++ IS I++ AF GL L +LD N L+ + F
Sbjct: 69 LTVVRSTSFSSVH--NLTVLWMYSNNISHIEAGAFYGLERLEELDIGDNSNLRIISPTAF 126
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L L + ++ G F+ L L L L + + + F+ L +L +L L
Sbjct: 127 RGLTKLHTLHLHRCGLSELPVGVFRGLFSLQYLYLQDNNLLALHEDTFLDLANLTYLFLH 186
Query: 180 NNKITTISGSNILPTGLHGID---LHHN 204
NNKI ++ ++L GL +D LH N
Sbjct: 187 NNKIKVVT-DHML-RGLVNLDRLLLHQN 212
Score = 39 (18.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 693 SSADEQPSTSNPEKSNENKSE 713
SS + + T+NP K EN S+
Sbjct: 364 SSYNSRQITNNPLKEKENISK 384
>ZFIN|ZDB-GENE-080219-38 [details] [associations]
symbol:zgc:172282 "zgc:172282" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-080219-38 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
HOVERGEN:HBG052352 EMBL:BC171440 IPI:IPI00882605 UniGene:Dr.85826
ProteinModelPortal:B7ZV32 Uniprot:B7ZV32
Length = 687
Score = 219 (82.2 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 93/349 (26%), Positives = 151/349 (43%)
Query: 30 KQTVEC-VNKSLITVVEGMD-PN-TQVLDYT--GNNLKTLHNEKFQKMGLVNLQKIYLSR 84
++TVE + ++ IT V+ D N T +L T N + + F L L+ ++L
Sbjct: 51 RRTVELRLTENFITAVKRRDFANMTSLLHLTLSRNTISQIMPYTFAD--LKRLRALHLDS 108
Query: 85 CRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY-PSLMKLTLSGNPIKQIKTGAF 143
R+SVI FRGLTNL L ++N L + F D+ +L L LS N + I
Sbjct: 109 NRLSVITDDHFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTI 168
Query: 144 QPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI---LPT-----G 195
L+ + TL + I+ + F L L L + +NK+ I + +P G
Sbjct: 169 GRLTNVNTLNMDHNLIDHVPLGIFSNLHKLARLDMTSNKLKKIPPDPLFLRIPVYAKSKG 228
Query: 196 --LHGIDLHH--NPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
L + L NP C+C L+ LRR C+ PP L++ + +E
Sbjct: 229 SPLSSLVLSFGGNPLHCNCELLWLRRLTREDDLET-----CASPPDLTAKYFWTIPEEEF 283
Query: 252 ACEPQI----TPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHA 307
C+P + +P TF +E G+ SL CK + P+ + W+ + E
Sbjct: 284 ICDPPVITRKSPKTFAME---GQPTSLKCKANGDPDPDVHWI------------SPEGRL 328
Query: 308 VYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVL 356
+ +T L I +++ D G F C+A N AG ++ T+ +V+
Sbjct: 329 IANTSRTLSFSNGSLEINITSLKDTGIFTCIASNAAGESTG--TVELVV 375
Score = 133 (51.9 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 52/187 (27%), Positives = 76/187 (40%)
Query: 2 MYWIFLIATIIKIVSA----CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYT 57
M W+ + + ++ VSA CP C+C+ + C L+ V +D T L T
Sbjct: 1 MEWL-IFSLLLLAVSASGQLCPKRCMCQNLSPSLAILCAKTGLLFVPTVIDRRTVELRLT 59
Query: 58 GNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
N + + F M +L + LSR IS I F L L L N L + D
Sbjct: 60 ENFITAVKRRDFANM--TSLLHLTLSRNTISQIMPYTFADLKRLRALHLDSNRLSVITDD 117
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQP-LSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
F +L L L+ N + I AF L L L+LS + I L ++ L
Sbjct: 118 HFRGLTNLRHLILANNQLHNISPHAFDDFLGTLEDLDLSYNNLVDIPWDTIGRLTNVNTL 177
Query: 177 KLDNNKI 183
+D+N I
Sbjct: 178 NMDHNLI 184
Score = 47 (21.6 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 8/21 (38%), Positives = 16/21 (76%)
Query: 693 SSADEQPSTSNPEKSNENKSE 713
+S+D Q T++P+ S+E K++
Sbjct: 659 TSSDTQEDTASPQVSDEKKAQ 679
Score = 37 (18.1 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 511 TQDTQDKASEAASVQYSDSGSQCQEWGN 538
+ DTQ+ + AS Q SD ++W +
Sbjct: 660 SSDTQE---DTASPQVSDEKKAQRDWSD 684
>MGI|MGI:2145995 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=ISO] [GO:0007156 "homophilic cell adhesion"
evidence=ISO;ISS] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=ISO;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISO] [GO:0043066 "negative
regulation of apoptotic process" evidence=ISO] [GO:0043069
"negative regulation of programmed cell death" evidence=ISO;ISS]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2145995 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OMA:SCIAMNR
OrthoDB:EOG43XV36 EMBL:AY237006 EMBL:AB078880 IPI:IPI00281119
RefSeq:NP_001158035.1 RefSeq:NP_001158074.1 RefSeq:NP_835215.1
UniGene:Mm.24005 ProteinModelPortal:Q80ZD9 SMR:Q80ZD9 PRIDE:Q80ZD9
Ensembl:ENSMUST00000053106 GeneID:105827 KEGG:mmu:105827
InParanoid:Q80ZD9 NextBio:357900 Bgee:Q80ZD9 CleanEx:MM_AMIGO2
Genevestigator:Q80ZD9 GermOnline:ENSMUSG00000048218 Uniprot:Q80ZD9
Length = 519
Score = 216 (81.1 bits), Expect = 2.6e-14, P = 2.6e-14
Identities = 98/377 (25%), Positives = 156/377 (41%)
Query: 5 IFLIATIIKIVSA--CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
+ +IA ++ ++ CPT+CIC V C NK+L V + + LD + N +
Sbjct: 25 LLVIAVMVSPSASGMCPTACIC----ATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIG 80
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
L + + + V L + L I+ I + +F NL LD S N L++V S TF +
Sbjct: 81 LLDAD-WIPVSFVKLSTLILRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSATFQEL 139
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG---LDSLEWLKLD 179
+L L L N I + AF LS+L L LS + + G L L +L +
Sbjct: 140 KALEVLLLYNNHISYLDPAAFGGLSHLQKLYLSGNFLTQFPMDLYTGRFKLADLTFLDVS 199
Query: 180 NNKITTISGS--NILP-TGLHGIDLHHNPWTCDCLLIGLRR-WLE---STKTPMAIDPIC 232
N+I +I N++P L GI LH NP+ CDC L L W S+ D C
Sbjct: 200 YNRIPSIPMHHINLVPGRQLRGIYLHGNPFVCDCSLYSLLIFWYRRHFSSVMDFKNDYTC 259
Query: 233 SV-PPRLSSVTIKQLSIDELACEPQITPSTFYL-----EIQEGKNVSLLCKVSAIPEAKI 286
+ S ++ L L C + +F+ E Q G+ + C S
Sbjct: 260 RLWSDSRHSHQLQLLQESFLNCSYSVINGSFHALGFIHEAQVGERAIVHCD-SKTGNGNT 318
Query: 287 TWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGST 346
+++ G P N + + + L+I N +D G + C+A N+
Sbjct: 319 DFIWVG-P-DNRLLEPDKDMGNFRV-----FYNGSLVIENPGFEDAGVYSCIAMNR--QR 369
Query: 347 SSNYTIRIVLKEENVEV 363
N T+ I++ N +
Sbjct: 370 LLNETVDIMINVSNFTI 386
>MGI|MGI:107973 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein,
acid labile subunit" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005520 "insulin-like growth
factor binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0042567
"insulin-like growth factor ternary complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 MGI:MGI:107973
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 CTD:3483
HOVERGEN:HBG000327 OrthoDB:EOG4FFD1R InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 EMBL:U66900 EMBL:AK004926
IPI:IPI00556721 PIR:JC6128 RefSeq:NP_032366.2 UniGene:Mm.3135
ProteinModelPortal:P70389 SMR:P70389 IntAct:P70389 MINT:MINT-217480
STRING:P70389 PaxDb:P70389 PRIDE:P70389 Ensembl:ENSMUST00000050714
GeneID:16005 KEGG:mmu:16005 GeneTree:ENSGT00690000101816
InParanoid:P70389 NextBio:288802 Bgee:P70389 Genevestigator:P70389
GermOnline:ENSMUSG00000046070 GO:GO:0042567 Uniprot:P70389
Length = 603
Score = 217 (81.4 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 56/190 (29%), Positives = 98/190 (51%)
Query: 18 CPTSCICKWKG--GKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
CP +C C + + +V C +++L + +G+ +T+ L GNNL ++ + FQ +
Sbjct: 41 CPVTCTCSYDDYTDELSVFCSSRNLTQLPDGIPVSTRALWLDGNNLSSIPSAAFQNLS-- 98
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L + L + ++ +A GL NL L N+L+++ + F PSL L+L N +
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAGLFRHTPSLASLSLGNNLL 158
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+++ G F+ LS+L L L + V+ D F GL +L L L NK+T + + + G
Sbjct: 159 GRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALLCGLG 218
Query: 196 -LHGIDLHHN 204
L +DL N
Sbjct: 219 ELRELDLSRN 228
Score = 178 (67.7 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 49/162 (30%), Positives = 75/162 (46%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L++++L IS I+ ++ GL+ L++LD + N L +P F L L LS
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSN 467
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + + PL L+LS +E + F L L +L L NN + T +
Sbjct: 468 NQLTMLSEDVLGPLQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTF----VP 523
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRW-LESTKT-PMAIDPIC 232
GL + L NPW C C L LR + L++ P + +C
Sbjct: 524 QPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQTVC 565
Score = 169 (64.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 46/130 (35%), Positives = 69/130 (53%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L+++ F + L LQK+YL R I+ + +AF G+ L LD SHN +
Sbjct: 223 LDLSRNALRSVKANVF--IHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAG 280
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ DTFP L L L+ N I ++ F+ L +L L+L I + + F GL L
Sbjct: 281 LLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQL 340
Query: 174 EWLKLDNNKI 183
E L L++N+I
Sbjct: 341 EVLTLNDNQI 350
Score = 143 (55.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+L L + FQ GL NL ++ L+ +++ + GL L +LD S N L++V ++
Sbjct: 180 NSLVVLPDTVFQ--GLGNLHELVLAGNKLTYLQPALLCGLGELRELDLSRNALRSVKANV 237
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F P L KL L N I + AF + L L+LS + + + F GL L L+L
Sbjct: 238 FIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRL 297
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHN 204
+N IT++ L + L HN
Sbjct: 298 AHNAITSLRPRTFKDLHFLEELQLGHN 324
Score = 141 (54.7 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 46/152 (30%), Positives = 70/152 (46%)
Query: 58 GNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
GNNL E + GL +L + L + V+ F+GL NL +L + N L +
Sbjct: 154 GNNLLGRLEEGLFR-GLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPA 212
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
L +L LS N ++ +K F L L L L + I + AF+G+ +L WL
Sbjct: 213 LLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLD 272
Query: 178 LDNNKITTISGSNILP--TGLHGIDLHHNPWT 207
L +N++ + + P GLH + L HN T
Sbjct: 273 LSHNRVAGLL-EDTFPGLLGLHVLRLAHNAIT 303
Score = 140 (54.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/130 (29%), Positives = 63/130 (48%)
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L + L + ++ FRGL++L DL+ N L +P F +L +L L+GN +
Sbjct: 147 SLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKL 206
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT- 194
++ L L L+LS+ + ++ F+ L L+ L LD N IT ++ L
Sbjct: 207 TYLQPALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMK 266
Query: 195 GLHGIDLHHN 204
L +DL HN
Sbjct: 267 ALRWLDLSHN 276
Score = 140 (54.3 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 47/161 (29%), Positives = 72/161 (44%)
Query: 45 EGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDL 104
EG+ +VL N + + F GL N+ + LS + + F+GL L L
Sbjct: 335 EGLG-QLEVLTLNDNQIHEVKVGAF--FGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSL 391
Query: 105 DFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIED 164
H+ L + TF L +L L N I I+ + LS L+ L+L+ + +
Sbjct: 392 HLEHSCLGRIRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTANQLTHLPR 451
Query: 165 AAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
F GL LE+L L NN++T +S + P +DL HN
Sbjct: 452 QLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLSHN 492
Score = 134 (52.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 45/174 (25%), Positives = 76/174 (43%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N V++ +GN L++L FQ GL L ++L + I F GL+ L L N
Sbjct: 363 NVAVMNLSGNCLRSLPEHVFQ--GLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN 420
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
+ ++ + L++L L+ N + + FQ L L L LS + ++ +
Sbjct: 421 SISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGP 480
Query: 170 LDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRR-WLES 221
L WL L +N++ T + G L ++L +N GL R WL++
Sbjct: 481 LQRAFWLDLSHNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVPQPGLERLWLDA 534
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 45/157 (28%), Positives = 72/157 (45%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P Q L Y NL T + +G+ L+ + LS R++ + F GL L L +H
Sbjct: 242 PRLQKL-YLDRNLITAVAPR-AFLGMKALRWLDLSHNRVAGLLEDTFPGLLGLHVLRLAH 299
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + ++ TF D L +L L N I+Q+ F+ L L L L+ I ++ AF
Sbjct: 300 NAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFF 359
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
GL ++ + L N + ++ G LH + L H+
Sbjct: 360 GLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHS 396
Score = 128 (50.1 bits), Expect = 0.00013, P = 0.00013
Identities = 43/151 (28%), Positives = 73/151 (48%)
Query: 36 VNKSLITVVE-----GMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVI 90
++++LIT V GM + LD + N + L + F GL+ L + L+ I+ +
Sbjct: 249 LDRNLITAVAPRAFLGMKA-LRWLDLSHNRVAGLLEDTFP--GLLGLHVLRLAHNAITSL 305
Query: 91 DSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLV 150
+ F+ L L +L HN ++ + TF L LTL+ N I ++K GAF L +
Sbjct: 306 RPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQIHEVKVGAFFGLFNVA 365
Query: 151 TLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ LS + + + F GL L L L+++
Sbjct: 366 VMNLSGNCLRSLPEHVFQGLGRLHSLHLEHS 396
>UNIPROTKB|Q86UN2 [details] [associations]
symbol:RTN4RL1 "Reticulon-4 receptor-like 1" species:9606
"Homo sapiens" [GO:0009897 "external side of plasma membrane"
evidence=IEA] [GO:0045121 "membrane raft" evidence=IEA] [GO:0009986
"cell surface" evidence=IDA] [GO:0004872 "receptor activity"
evidence=IDA] [GO:0031103 "axon regeneration" evidence=TAS]
[GO:0046658 "anchored to plasma membrane" evidence=IDA]
InterPro:IPR001611 PROSITE:PS51450 EMBL:CH471108 GO:GO:0009986
GO:GO:0009897 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0004872 GO:GO:0045121
InterPro:IPR000372 SMART:SM00013 GO:GO:0046658 GO:GO:0031103
EMBL:AY250219 EMBL:AF532859 EMBL:BC128608 EMBL:AL834409
EMBL:BK001305 IPI:IPI00328745 RefSeq:NP_848663.1 UniGene:Hs.22917
ProteinModelPortal:Q86UN2 SMR:Q86UN2 STRING:Q86UN2 DMDM:74714017
PRIDE:Q86UN2 Ensembl:ENST00000331238 GeneID:146760 KEGG:hsa:146760
UCSC:uc002ftp.3 CTD:146760 GeneCards:GC17M001786 HGNC:HGNC:21329
HPA:HPA044428 MIM:610461 neXtProt:NX_Q86UN2 PharmGKB:PA134973992
HOGENOM:HOG000116109 HOVERGEN:HBG063707 InParanoid:Q86UN2 KO:K16660
OMA:NCTSHRN OrthoDB:EOG4FXR7G GenomeRNAi:146760 NextBio:85443
Bgee:Q86UN2 CleanEx:HS_RTN4RL1 Genevestigator:Q86UN2
GermOnline:ENSG00000185924 Uniprot:Q86UN2
Length = 441
Score = 214 (80.4 bits), Expect = 2.8e-14, P = 2.8e-14
Identities = 65/209 (31%), Positives = 96/209 (45%)
Query: 54 LDYTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD N L+TL E FQ GLV L +YL +C +S + + F GL +L L N ++
Sbjct: 105 LDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDNHIE 162
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ D F D +L L L GN + + G F+ L L L L + ++ + AF L
Sbjct: 163 YLQDDIFVDLVNLSHLFLHGNKLWSLGPGTFRGLVNLDRLLLHENQLQWVHHKAFHDLRR 222
Query: 173 LEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L L L NN ++ + G + P G L + L+ NPW C C L WL+ + + P
Sbjct: 223 LTTLFLFNNSLSELQGECLAPLGALEFLRLNGNPWDCGCRARSLWEWLQRFRGSSSAVP- 281
Query: 232 CSVPPRLSSVTIKQLSIDELA-CEPQITP 259
C P +K L ++ C +P
Sbjct: 282 CVSPGLRHGQDLKLLRAEDFRNCTGPASP 310
Score = 154 (59.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 60/219 (27%), Positives = 90/219 (41%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+A + + CP C+C TV C + + EG+ +++ + N + L
Sbjct: 12 LLLVAAELPLGGGCPRDCVCY--PAPMTVSCQAHNFAAIPEGIPVDSERVFLQNNRIGLL 69
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYP 123
F +V L IY + I+ I F G +L +LD N L+T+ +TF
Sbjct: 70 QPGHFSP-AMVTLW-IYSNN--ITYIHPSTFEGFVHLEELDLGDNRQLRTLAPETFQGLV 125
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + + G F L L L L IE ++D FV L +L L L NK+
Sbjct: 126 KLHALYLYKCGLSALPAGVFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKL 185
Query: 184 TTISGSNILPTGLHGID---LHHNP--WTCDCLLIGLRR 217
++ GL +D LH N W LRR
Sbjct: 186 WSLGPGTF--RGLVNLDRLLLHENQLQWVHHKAFHDLRR 222
>UNIPROTKB|E1BEI7 [details] [associations]
symbol:RTN4RL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046658 "anchored to plasma membrane" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009986 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:DAAA02048667 IPI:IPI00690499 Ensembl:ENSBTAT00000016317
Uniprot:E1BEI7
Length = 446
Score = 214 (80.4 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 69/223 (30%), Positives = 102/223 (45%)
Query: 47 MDPNT-------QVLDYTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGL 98
+DPNT + LD N L+TL E FQ GLV L +YL +C +S + + F GL
Sbjct: 91 IDPNTFQGFVHLEELDLGDNRQLRTLAPETFQ--GLVKLHALYLYKCGLSALPAGIFGGL 148
Query: 99 TNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG 158
+L L N ++ + D F D +L L L GN + + F+ L L L L +
Sbjct: 149 HSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKLWSLGQDTFRGLVNLDRLLLHENQ 208
Query: 159 IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRR 217
++ + AF L L L L NN ++ + G + P G L + L+ N W C C L
Sbjct: 209 LQWVHHKAFHDLRRLTTLFLFNNSLSELPGDCLAPLGALEFLRLNGNAWDCGCRARSLWE 268
Query: 218 WLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL-ACEPQITP 259
WL+ + + P C P RL +K L ++ C +P
Sbjct: 269 WLQRFRGSSSAVP-CVSPERLHGQDLKLLRAEDFWNCTGPASP 310
Score = 169 (64.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 63/219 (28%), Positives = 96/219 (43%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+A + + S CP C+C TV C + + EG+ +++ + N++ L
Sbjct: 12 LLLLAGELPLGSGCPRDCVCY--PAPMTVSCQAHNFAAIPEGIPEDSERIFLQNNHITLL 69
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYP 123
F +V L IY + I+ ID F+G +L +LD N L+T+ +TF
Sbjct: 70 RQGHFSP-AMVTLW-IYSNN--ITFIDPNTFQGFVHLEELDLGDNRQLRTLAPETFQGLV 125
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L L L + + G F L L L L IE ++D FV L +L L L NK+
Sbjct: 126 KLHALYLYKCGLSALPAGIFGGLHSLQYLYLQDNHIEYLQDDIFVDLVNLSHLFLHGNKL 185
Query: 184 TTISGSNILPTGLHGID---LHHNP--WTCDCLLIGLRR 217
++ G + GL +D LH N W LRR
Sbjct: 186 WSL-GQDTF-RGLVNLDRLLLHENQLQWVHHKAFHDLRR 222
>UNIPROTKB|Q3SXY7 [details] [associations]
symbol:LRIT3 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
EMBL:CH471057 InterPro:IPR013098 Pfam:PF07679 EMBL:AC005509
eggNOG:NOG310852 HOGENOM:HOG000063714 HOVERGEN:HBG108105
EMBL:AK126648 EMBL:BC104037 IPI:IPI00394850 IPI:IPI00746317
RefSeq:NP_940908.3 UniGene:Hs.308127 ProteinModelPortal:Q3SXY7
SMR:Q3SXY7 PhosphoSite:Q3SXY7 DMDM:269849616 PRIDE:Q3SXY7
Ensembl:ENST00000327908 Ensembl:ENST00000379920
Ensembl:ENST00000409621 GeneID:345193 KEGG:hsa:345193
UCSC:uc003hzw.4 UCSC:uc003hzx.4 CTD:345193 GeneCards:GC04P110772
HGNC:HGNC:24783 HPA:HPA013454 neXtProt:NX_Q3SXY7
PharmGKB:PA162394355 InParanoid:Q3SXY7 OMA:RTGDHPE
OrthoDB:EOG4THVT6 GenomeRNAi:345193 NextBio:98830 Bgee:Q3SXY7
CleanEx:HS_LRIT3 Genevestigator:Q3SXY7 Uniprot:Q3SXY7
Length = 634
Score = 216 (81.1 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 77/290 (26%), Positives = 133/290 (45%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
LV LQ ++++ ++ ID +F L L +L N L P + D P L L L N
Sbjct: 35 LVELQYLWVTYNSVASIDPSSFYNLKQLHELRLDGNSLAAFPWASLLDMPLLRTLDLHNN 94
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE-WLKLDNNKITTISGS-NI 191
I + A + L L L+LS + + D LE W L ++T SG ++
Sbjct: 95 KITSVPNEALRYLKNLAYLDLSSNRLTTLPP------DFLESWTHL----VSTPSGVLDL 144
Query: 192 LPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKT--P--MAIDPI--CSVPPRLSSVTIKQ 245
P+ + + L NPW CDC + + +E +K P + +DP+ CS P RL+ + ++
Sbjct: 145 SPSRII-LGLQDNPWFCDC---HISKMIELSKVVDPAIVLLDPLMTCSEPERLTGILFQR 200
Query: 246 LSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASES 305
++ +P + S + G NV L C + P +ITW +++S + +
Sbjct: 201 AELEH-CLKPSVMTSATKIMSALGSNVLLRCDATGFPTPQITWT------RSDSSPVNYT 253
Query: 306 HAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
S EEG ++ S + + + D G + C A+N AG + + T+ ++
Sbjct: 254 VIQESPEEG--VRWSIMSLTGISSKDAGDYKCKAKNLAGMSEAVVTVTVL 301
>UNIPROTKB|A1KZ92 [details] [associations]
symbol:PXDNL "Peroxidasin-like protein" species:9606 "Homo
sapiens" [GO:0004519 "endonuclease activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0004601 "peroxidase activity"
evidence=ISS] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=ISS] [GO:0020037 "heme binding" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] [GO:0005615
"extracellular space" evidence=ISS] InterPro:IPR001611
InterPro:IPR001007 InterPro:IPR002007 InterPro:IPR007110
InterPro:IPR010255 InterPro:IPR019791 Pfam:PF00093 Pfam:PF03098
PRINTS:PR00457 PROSITE:PS00436 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS50292 PROSITE:PS50835 PROSITE:PS51450 SMART:SM00214
GO:GO:0005737 GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0020037
GO:GO:0090305 GO:GO:0004601 GO:GO:0004519 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0042744
SUPFAM:SSF48113 PROSITE:PS00435 EMBL:CH471068 MEROPS:I43.001
Gene3D:1.10.640.10 eggNOG:NOG262194 HOGENOM:HOG000016084
EMBL:AC090186 EMBL:EU170240 EMBL:AY877349 EMBL:AC103958
EMBL:AC107374 EMBL:AC011128 EMBL:AC012413 EMBL:AK058200
EMBL:AK131524 IPI:IPI00065049 IPI:IPI00890814 RefSeq:NP_653252.3
UniGene:Hs.444882 ProteinModelPortal:A1KZ92 SMR:A1KZ92
PeroxiBase:5398 PeroxiBase:5827 PhosphoSite:A1KZ92 PRIDE:A1KZ92
Ensembl:ENST00000356297 Ensembl:ENST00000543296 GeneID:137902
KEGG:hsa:137902 UCSC:uc003xqu.4 CTD:137902 GeneCards:GC08M052232
HGNC:HGNC:26359 HPA:HPA007919 neXtProt:NX_A1KZ92
PharmGKB:PA142671110 HOVERGEN:HBG108312 OMA:EFRYNDL
OrthoDB:EOG4HDSSN GenomeRNAi:137902 NextBio:83705 Bgee:A1KZ92
CleanEx:HS_PXDNL Genevestigator:A1KZ92 Uniprot:A1KZ92
Length = 1463
Score = 222 (83.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 72/267 (26%), Positives = 119/267 (44%)
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
RI I AF+ L NL L ++N ++ + + F +L+ L L N I + F+
Sbjct: 61 RIREIPGSAFKKLKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKG 120
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHN 204
L L L + +E+++ F L LE L L NNK++ I +GS L + L N
Sbjct: 121 LISLEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSN 180
Query: 205 PWTCDCLLIGLRRWLE--STKTPMAIDPICSVPPRLSSVTIKQLSIDELACE-PQITPST 261
CDC L+ L L+ + C P RL + ++++E C+ P+IT
Sbjct: 181 ALVCDCDLMWLGELLQGFAQHGHTQAAATCEYPRRLHGRAVASVTVEEFNCQSPRITFEP 240
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSE 321
+E+ G V C+ P+ +I W+ + N S+ + + ++GT
Sbjct: 241 QDVEVPSGNTVYFTCRAEGNPKPEIIWIHN-----NHSLDLEDDTRLNVFDDGT------ 289
Query: 322 LLIYNSNIDDNGTFVCVAENQAGSTSS 348
L+I N+ D G + C+A N AG +
Sbjct: 290 LMIRNTRESDQGVYQCMARNSAGEAKT 316
Score = 172 (65.6 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 60/207 (28%), Positives = 89/207 (42%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+FL+A CP+ C+C K TV C++ L + + + T VLD N ++ +
Sbjct: 11 LFLLAGWCLPGLPCPSRCLCF----KSTVRCMHLMLDHIPQ-VPQQTTVLDLRFNRIREI 65
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F+K L NL + L+ I I AF GL NL+ L N + + TF S
Sbjct: 66 PGSAFKK--LKNLNTLLLNNNHIRKISRNAFEGLENLLYLYLYKNEIHALDKQTFKGLIS 123
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L + N ++ ++ F L L L L + I +F LDSL+ L+LD+N +
Sbjct: 124 LEHLYIHFNQLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNALV 183
Query: 185 TISGSNILPTGLHGIDLH-HNPWTCDC 210
L L G H H C
Sbjct: 184 CDCDLMWLGELLQGFAQHGHTQAAATC 210
Score = 129 (50.5 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
Identities = 42/149 (28%), Positives = 70/149 (46%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
NT +L+ N+++ + F+ GL NL +YL + I +D + F+GL +L L N
Sbjct: 77 NTLLLN--NNHIRKISRNAFE--GLENLLYLYLYKNEIHALDKQTFKGLISLEHLYIHFN 132
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+ + +TF D L +L L N + +I G+F L L L L + D ++G
Sbjct: 133 QLEMLQPETFGDLLRLERLFLHNNKLSKIPAGSFSNLDSLKRLRLDSNALVCDCDLMWLG 192
Query: 170 LDSLEWLKLDNNKITTISGSNILPTGLHG 198
+ L+ + T + + P LHG
Sbjct: 193 -ELLQGFAQHGH--TQAAATCEYPRRLHG 218
Score = 113 (44.8 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 34/121 (28%), Positives = 59/121 (48%)
Query: 238 LSSVTIKQLSIDELACEPQITPSTFYL----EIQEGKNVSLLCKVSAIPEAKITWLFDGV 293
+SS+ +K++S+ +L +P+ L ++ GKN+++ C P+ ITW +GV
Sbjct: 491 VSSLGVKKVSV-QLTVKPKALAVFTQLPQDTSVEVGKNINISCHAQGEPQPIITWNKEGV 549
Query: 294 PIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIR 353
I +ES + +EGT L IY++ D G + CVA N G +N +
Sbjct: 550 QI-------TESGKFHVDDEGT------LTIYDAGFPDQGRYECVARNSFGLAVTNMFLT 596
Query: 354 I 354
+
Sbjct: 597 V 597
Score = 57 (25.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
Identities = 29/122 (23%), Positives = 48/122 (39%)
Query: 246 LSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFD-GVPIQNESMSASE 304
L L +P E+ G + +L C + P ITW D G+ + S +
Sbjct: 321 LRYSSLPAKPSFVIQPQDTEVLIGTSTTLECMATGHPHPLITWTRDNGLELDG-SRHVAT 379
Query: 305 SHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTI----RIVLKEEN 360
S +Y + T+ + +N +GT V A N +T+ ++VL+E
Sbjct: 380 SSGLY-LQNITQRDHGRFTCHANN--SHGT-VQAAANIIVQAPPQFTVTPKDQVVLEEHA 435
Query: 361 VE 362
VE
Sbjct: 436 VE 437
Score = 53 (23.7 bits), Expect = 4.6e-08, Sum P(3) = 4.6e-08
Identities = 28/116 (24%), Positives = 46/116 (39%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDG--VPIQNESMSASESHAVYSTE 312
PQ T + + E V LC+ P I W G +P++ + H V S+
Sbjct: 419 PQFTVTPKDQVVLEEHAVEWLCEADGNPPPVIVWTKTGGQLPVEGQ-------HTVLSS- 470
Query: 313 EGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFP 368
GT L I + D G + C A + G ++++ +K + + V T P
Sbjct: 471 -GT------LRIDRAAQHDQGQYECQAVSSLGV--KKVSVQLTVKPKALAVFTQLP 517
Score = 37 (18.1 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 552 LNNVYNQPADIHLTP 566
L +Y P DI L P
Sbjct: 1184 LRKLYGSPGDIDLWP 1198
>ZFIN|ZDB-GENE-091214-3 [details] [associations]
symbol:lingo4b "leucine rich repeat and Ig domain
containing 4b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-091214-3 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098 Pfam:PF07679
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 InterPro:IPR025875
Pfam:PF12799 HOVERGEN:HBG057546 EMBL:BC171652 IPI:IPI00612243
UniGene:Dr.74856 ProteinModelPortal:B7ZVN7 eggNOG:NOG299566
OMA:IVESEYA OrthoDB:EOG4NZTT6 Uniprot:B7ZVN7
Length = 604
Score = 215 (80.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 58/186 (31%), Positives = 92/186 (49%)
Query: 4 WIFLIATIIKIVSA---CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
W L+ + + +A CP C C V C ++ L V EG+ N + LD +GN
Sbjct: 12 WTVLLLWCLNLSAADLPCPQRCSCS--RDPLEVNCSSRHLTAVPEGLPTNAKRLDLSGNQ 69
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
LKTL +F + L+ + LS IS+I+ + F+GL NL L +N L+ +P F
Sbjct: 70 LKTLARRQFSSLS--KLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKILPVGVFS 127
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
+L +L +S N I F+ + L L+ + + I AFVGL +L+ L +D
Sbjct: 128 GLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQALKELNVDR 187
Query: 181 NKITTI 186
+ +T+I
Sbjct: 188 SNLTSI 193
Score = 210 (79.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 84/305 (27%), Positives = 128/305 (41%)
Query: 61 LKTLHNEKFQKMG-LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
+ L N F+++ L LQ ++ S + +++S + GL NL L ++ L +P
Sbjct: 214 ISVLPNNAFRRLHQLRTLQILHWSS--LEMLNSNSLVGL-NLTTLVLTNCNLSAIPYSPL 270
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L LS NPI I+ L L L L + IE AF GL L +
Sbjct: 271 RHLAYLQYLDLSYNPITSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVS 330
Query: 180 NNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAID---PICSVP 235
+N+++T+ S G L + L NP CDC L+ W+ + + D P CS P
Sbjct: 331 SNRLSTLEESAFHSVGNLQTLRLDRNPLACDCRLL----WVMRRRRRLDFDGRQPTCS-P 385
Query: 236 PRLSSVTIKQLSIDEL----AC-EPQITPSTFY-LEIQEGKNVSLLCKVSAIPEAKITWL 289
+ S EL C + QI + + EG V CK P ITWL
Sbjct: 386 LNHQRKAFRDFSEAELPVVFTCRQAQILNRQLQDISVIEGMRVHFDCKADGYPSPSITWL 445
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSN 349
SA +S A+ S + L I + + D+GT++C A N AG+ S +
Sbjct: 446 -----------SAQQS-ALSSAGRVRVLTNGSLQISYAQVQDSGTYLCSAANAAGNDSIS 493
Query: 350 YTIRI 354
++ +
Sbjct: 494 VSLHV 498
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 41/132 (31%), Positives = 71/132 (53%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
Q+L ++ +L+ L++ +GL NL + L+ C +S I R L L LD S+N +
Sbjct: 232 QILHWS--SLEMLNSNSL--VGL-NLTTLVLTNCNLSAIPYSPLRHLAYLQYLDLSYNPI 286
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ + D L +L L G + QI+ GAF+ LS L +S + +E++AF +
Sbjct: 287 TSIQGNLLGDLLRLQELHLVGGNLLQIEPGAFRGLSRFRLLNVSSNRLSTLEESAFHSVG 346
Query: 172 SLEWLKLDNNKI 183
+L+ L+LD N +
Sbjct: 347 NLQTLRLDRNPL 358
Score = 131 (51.2 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 35/116 (30%), Positives = 58/116 (50%)
Query: 73 GL-VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
GL N +++ LS ++ + + F L+ L DLD S N++ + +TF +L L +
Sbjct: 55 GLPTNAKRLDLSGNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIK 114
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
N +K + G F LS L L++S+ I V D F + +L+ L N + IS
Sbjct: 115 NNRLKILPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFIS 170
Score = 122 (48.0 bits), Expect = 0.00060, P = 0.00060
Identities = 46/157 (29%), Positives = 68/157 (43%)
Query: 41 ITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTN 100
+ +G+ N + L N LK L F GL NL+++ +S I V FR + N
Sbjct: 99 VETFQGLK-NLRYLRIKNNRLKILPVGVFS--GLSNLRRLDISENEILVFLDYTFRDMIN 155
Query: 101 LVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIE 160
L LD N L + F +L +L + + + I T A L L L L K I
Sbjct: 156 LQQLDAGENDLVFISQRAFVGLQALKELNVDRSNLTSIPTEALSQLQSLTKLRLRKLTIS 215
Query: 161 VIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLH 197
V+ + AF L L L++ + + SN L GL+
Sbjct: 216 VLPNNAFRRLHQLRTLQILHWSSLEMLNSNSL-VGLN 251
>UNIPROTKB|P35858 [details] [associations]
symbol:IGFALS "Insulin-like growth factor-binding protein
complex acid labile subunit" species:9606 "Homo sapiens"
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0005576 "extracellular
region" evidence=NAS;TAS] [GO:0005520 "insulin-like growth factor
binding" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0007165
GO:GO:0005615 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 EMBL:M86826 EMBL:AF192554
EMBL:AK303146 EMBL:AC012180 EMBL:AL031724 IPI:IPI00020996
IPI:IPI00925635 PIR:A41915 RefSeq:NP_001139478.1 RefSeq:NP_004961.1
UniGene:Hs.839 ProteinModelPortal:P35858 SMR:P35858 STRING:P35858
DMDM:543800 PaxDb:P35858 PeptideAtlas:P35858 PRIDE:P35858
DNASU:3483 Ensembl:ENST00000215539 Ensembl:ENST00000415638
GeneID:3483 KEGG:hsa:3483 UCSC:uc002cmy.3 CTD:3483
GeneCards:GC16M001840 HGNC:HGNC:5468 HPA:HPA040692 HPA:HPA040948
MIM:601489 neXtProt:NX_P35858 Orphanet:140941 PharmGKB:PA29702
HOGENOM:HOG000033909 HOVERGEN:HBG000327 InParanoid:P35858
OMA:HLDRGCL OrthoDB:EOG4FFD1R PhylomeDB:P35858 GenomeRNAi:3483
NextBio:13696 ArrayExpress:P35858 Bgee:P35858 CleanEx:HS_IGFALS
Genevestigator:P35858 GermOnline:ENSG00000099769 GO:GO:0005520
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 Uniprot:P35858
Length = 605
Score = 215 (80.7 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 58/191 (30%), Positives = 95/191 (49%)
Query: 17 ACPTSCICKWK--GGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
ACP +C+C + + +V C +++L + +G+ TQ L GNNL ++ FQ +
Sbjct: 40 ACPAACVCSYDDDADELSVFCSSRNLTRLPDGVPGGTQALWLDGNNLSSVPPAAFQNLS- 98
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
+L + L ++ ++ +A GL NL L N L+++ TF P+L L LS N
Sbjct: 99 -SLGFLNLQGGQLGSLEPQALLGLENLCHLHLERNQLRSLALGTFAHTPALASLGLSNNR 157
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
+ +++ G F+ L L L L + V+ DAAF GL SL L L N++ + +
Sbjct: 158 LSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLAYLQPALFSGL 217
Query: 195 G-LHGIDLHHN 204
L +DL N
Sbjct: 218 AELRELDLSRN 228
Score = 180 (68.4 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 52/155 (33%), Positives = 76/155 (49%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L+ + F + L LQK+YL R I+ + AF GL L LD SHN +
Sbjct: 223 LDLSRNALRAIKANVFVQ--LPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAG 280
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ DTFP L L LS N I ++ F+ L +L L+L I + + +F GL L
Sbjct: 281 LLEDTFPGLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQLAERSFEGLGQL 340
Query: 174 EWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTC 208
E L LD+N++ + L GL + + + C
Sbjct: 341 EVLTLDHNQLQEVKAGAFL--GLTNVAVMNLSGNC 373
Score = 177 (67.4 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 48/162 (29%), Positives = 78/162 (48%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L++++L + I+ ++ GL L++LD + N L +P F L L LS
Sbjct: 408 GLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSR 467
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + ++ A PL L++S +E + ++ L L +L L NN + T +
Sbjct: 468 NRLAELPADALGPLQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQ--- 524
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRW-LES-TKTPMAIDPIC 232
P GL + L NPW C C L LR + L++ + P + IC
Sbjct: 525 PPGLERLWLEGNPWDCGCPLKALRDFALQNPSAVPRFVQAIC 566
Score = 158 (60.7 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L + LS R+S ++ F GL +L DL+ N L +P F SL +L L+GN +
Sbjct: 148 LASLGLSNNRLSRLEDGLFEGLGSLWDLNLGWNSLAVLPDAAFRGLGSLRELVLAGNRLA 207
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTG 195
++ F L+ L L+LS+ + I+ FV L L+ L LD N I ++ G+ +
Sbjct: 208 YLQPALFSGLAELRELDLSRNALRAIKANVFVQLPRLQKLYLDRNLIAAVAPGAFLGLKA 267
Query: 196 LHGIDLHHN 204
L +DL HN
Sbjct: 268 LRWLDLSHN 276
Score = 157 (60.3 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 46/147 (31%), Positives = 72/147 (48%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+L L + F+ GL +L+++ L+ R++ + F GL L +LD S N L+ + ++
Sbjct: 180 NSLAVLPDAAFR--GLGSLRELVLAGNRLAYLQPALFSGLAELRELDLSRNALRAIKANV 237
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F P L KL L N I + GAF L L L+LS + + + F GL L L+L
Sbjct: 238 FVQLPRLQKLYLDRNLIAAVAPGAFLGLKALRWLDLSHNRVAGLLEDTFPGLLGLRVLRL 297
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHN 204
+N I ++ L + L HN
Sbjct: 298 SHNAIASLRPRTFKDLHFLEELQLGHN 324
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N ++ L F+ GL L+ + L ++ + + AF GLTN+ ++ S N L+ +P
Sbjct: 324 NRIRQLAERSFE--GLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQV 381
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F L L L G+ + +I+ F LS L L L G+ IE+ + GL L L L
Sbjct: 382 FRGLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDNGLVGIEEQSLWGLAELLELDL 441
Query: 179 DNNKIT 184
+N++T
Sbjct: 442 TSNQLT 447
Score = 135 (52.6 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N + L + F GL+ L+ + LS I+ + + F+ L L +L HN ++
Sbjct: 271 LDLSHNRVAGLLEDTFP--GLLGLRVLRLSHNAIASLRPRTFKDLHFLEELQLGHNRIRQ 328
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ +F L LTL N ++++K GAF L+ + + LS + + + F GL L
Sbjct: 329 LAERSFEGLGQLEVLTLDHNQLQEVKAGAFLGLTNVAVMNLSGNCLRNLPEQVFRGLGKL 388
Query: 174 EWLKLDNNKITTISGSNILPTGLHGI 199
L L+ + + I TGL G+
Sbjct: 389 HSLHLEGSCLGRIRPHTF--TGLSGL 412
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 48/174 (27%), Positives = 76/174 (43%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N V++ +GN L+ L + F+ GL L ++L + I F GL+ L L N
Sbjct: 363 NVAVMNLSGNCLRNLPEQVFR--GLGKLHSLHLEGSCLGRIRPHTFTGLSGLRRLFLKDN 420
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L + + L++L L+ N + + FQ L L L LS+ + + A
Sbjct: 421 GLVGIEEQSLWGLAELLELDLTSNQLTHLPHRLFQGLGKLEYLLLSRNRLAELPADALGP 480
Query: 170 LDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPW-TCDCLLIGLRR-WLE 220
L WL + +N++ + S + P G L + L +N T GL R WLE
Sbjct: 481 LQRAFWLDVSHNRLEALPNSLLAPLGRLRYLSLRNNSLRTFTPQPPGLERLWLE 534
>MGI|MGI:2448607 [details] [associations]
symbol:Nyx "nyctalopin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0007601 "visual perception"
evidence=IMP] [GO:0050896 "response to stimulus" evidence=IEA]
MGI:MGI:2448607 GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0050896
GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477 HOVERGEN:HBG031762
KO:K08129 OrthoDB:EOG43JC4W EMBL:AY114303 EMBL:BC035244
EMBL:BC048381 EMBL:AK038912 IPI:IPI00117261 RefSeq:NP_775591.1
UniGene:Mm.90233 ProteinModelPortal:P83503 SMR:P83503 STRING:P83503
PhosphoSite:P83503 PRIDE:P83503 Ensembl:ENSMUST00000050434
GeneID:236690 KEGG:mmu:236690 GeneTree:ENSGT00690000101803
InParanoid:P83503 NextBio:383039 Bgee:P83503 CleanEx:MM_NYX
Genevestigator:P83503 GermOnline:ENSMUSG00000051228 Uniprot:P83503
Length = 476
Score = 211 (79.3 bits), Expect = 7.5e-14, P = 7.5e-14
Identities = 74/252 (29%), Positives = 114/252 (45%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+G+ L+ + L R+ + + AF L DL + N+L T+P+ F L L L
Sbjct: 198 LGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDNLLATLPAAAFRGLRRLRTLNLG 257
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
GN + + F L+ L L L + I +E+ AF L L L L+ N++T +S +
Sbjct: 258 GNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAF 317
Query: 192 LPTGLHG-IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL---- 246
P G + L NPW CDC L LR W+E + D C+ P ++ + Q+
Sbjct: 318 QPGFFLGRLFLFRNPWRCDCQLEWLRDWMEGSGR--VADVACASPGSVAGQDLSQVVFER 375
Query: 247 SIDELACEPQ---IT-----PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGV-PIQN 297
S D L +P T PS + + SLL K+ A P A + + + + N
Sbjct: 376 SSDGLCVDPDELNFTTSSPGPSPEPVATTVSRFSSLLSKLLA-PRAPVEEVANTTWELVN 434
Query: 298 ESMSAS-ESHAV 308
S++ S SHAV
Sbjct: 435 VSLNDSFRSHAV 446
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 43/136 (31%), Positives = 62/136 (45%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL NL + R RI + S + G+ L L N ++ V + F D +L L L+
Sbjct: 175 GLANLTHAHFERSRIEAVASGSLLGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLND 234
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNI 191
N + + AF+ L L TL L + + A F L LE L LD N IT + G+
Sbjct: 235 NLLATLPAAAFRGLRRLRTLNLGGNALGSVARAWFSDLAELELLYLDRNSITFVEEGAFQ 294
Query: 192 LPTGLHGIDLHHNPWT 207
+GL + L+ N T
Sbjct: 295 NLSGLLALHLNGNRLT 310
>RGD|727911 [details] [associations]
symbol:Amigo2 "adhesion molecule with Ig like domain 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=NAS] [GO:0007156 "homophilic
cell adhesion" evidence=IPI] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=IPI] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043069 "negative regulation
of programmed cell death" evidence=IDA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:727911 GO:GO:0005634 GO:GO:0043066
GO:GO:0005887 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007157
InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156
GeneTree:ENSGT00530000063545 CTD:347902 OrthoDB:EOG43XV36
EMBL:AY237730 EMBL:AB078879 IPI:IPI00331944 RefSeq:NP_877968.2
UniGene:Rn.98123 ProteinModelPortal:Q7TNJ4 STRING:Q7TNJ4
PRIDE:Q7TNJ4 Ensembl:ENSRNOT00000009199 GeneID:300186
KEGG:rno:300186 UCSC:RGD:727911 InParanoid:Q7TNJ4 NextBio:646483
Genevestigator:Q7TNJ4 GermOnline:ENSRNOG00000007032 Uniprot:Q7TNJ4
Length = 520
Score = 211 (79.3 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 102/380 (26%), Positives = 157/380 (41%)
Query: 5 IFLIATIIKIVSA--CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLK 62
+ +IA ++ S+ CPT+CIC V C NK+L V + + LD + N +
Sbjct: 25 LLVIAVMVSPSSSGLCPTACIC----ATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIG 80
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
L + + + V L + + I+ I + +F NL LD S N L++V S F +
Sbjct: 81 LLDAD-WIPVSFVKLSTLIVRHNNITSISTGSFSTTPNLKCLDLSSNRLKSVKSAMFQEL 139
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG---LDSLEWLKLD 179
L L L N I + AF LS+L L LS + +VG L L +L +
Sbjct: 140 KVLEVLLLYNNHISYLDPAAFGGLSHLQKLYLSGNFLTKFPMDLYVGRFKLADLTFLDVS 199
Query: 180 NNKITTISGS--NILP-TGLHGIDLHHNPWTCDCLLIGL-----RRWLESTKTPMAIDPI 231
N+I +I N++P L GI LH NP+ CDC L L RR S T D
Sbjct: 200 YNQIASIPMHHINLVPGKQLRGIFLHGNPFVCDCSLYSLLTFWYRRHFNSV-TDFKHDYT 258
Query: 232 CSVPPRLSSVTIKQLSI--DE-LACEPQITPSTFYL-----EIQEGKNVSLLCKVSAIPE 283
C + L S QL + D L C + +F+ E Q G+ + C
Sbjct: 259 CRL--WLDSRHSHQLLLLQDSFLNCSHSVINGSFHALGFIHEAQVGERAIVHCD-GKTGN 315
Query: 284 AKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQA 343
+++ G P N + + + L+I N +D G + C+A N+
Sbjct: 316 GNTDFIWVG-P-DNRLLEPDKDTGNFRV-----FYNGSLVIENPGFEDAGVYSCIAMNR- 367
Query: 344 GSTSSNYTIRIVLKEENVEV 363
N T+ I++ N +
Sbjct: 368 -QRLLNETVDIMINVSNFTI 386
>UNIPROTKB|Q5R7M3 [details] [associations]
symbol:AMIGO2 "Amphoterin-induced protein 2" species:9601
"Pongo abelii" [GO:0007156 "homophilic cell adhesion" evidence=ISS]
[GO:0007157 "heterophilic cell-cell adhesion" evidence=ISS]
[GO:0043069 "negative regulation of programmed cell death"
evidence=ISS] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886
GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG080231
GO:GO:0007156 EMBL:CR860091 UniGene:Pab.11604
ProteinModelPortal:Q5R7M3 PRIDE:Q5R7M3 InParanoid:Q5R7M3
Uniprot:Q5R7M3
Length = 522
Score = 211 (79.3 bits), Expect = 9.3e-14, P = 9.3e-14
Identities = 98/362 (27%), Positives = 147/362 (40%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CPT+CIC V C NK L V + + LD + N + L +E + + L
Sbjct: 41 CPTACIC----ATDIVSCTNKHLSKVPGNLFRLMKRLDLSYNRIGLLDSE-WIPVSFAKL 95
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ L I+ I + +F NL LD S N L+TV + F + L L L N I
Sbjct: 96 NTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHISY 155
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG---LDSLEWLKLDNNKITTISGS--NIL 192
+ AF LS L L LS + +VG L L +L + N+I ++ N++
Sbjct: 156 LDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMPMHHINLV 215
Query: 193 P-TGLHGIDLHHNPWTCDCLLIGLRR-WLE---STKTPMAIDPICSV-PPRLSSVTIKQL 246
P L GI LH NP+ CDC L L W S+ D C + S + L
Sbjct: 216 PGKQLRGIYLHGNPFVCDCSLYSLLVFWYRRHFSSVMDFKNDYTCRLWSDSRHSRQVLLL 275
Query: 247 SIDELACEPQITPSTF----YL-EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
+ C I +F ++ E Q G+ + + C S A +++ G P
Sbjct: 276 QDSFMNCSDSIINGSFRALGFIHEAQVGERLMVHCD-SKTGNANTDFIWVG-PDNRLLEP 333
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENV 361
E Y G+ L+I + +D G + C+A N+ N T+ + + NV
Sbjct: 334 DKEMENFYVFHNGS------LVIESPRFEDAGVYSCIAMNK--QRLLNETVDVTINVSNV 385
Query: 362 EV 363
V
Sbjct: 386 TV 387
>UNIPROTKB|F1NZH0 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
SMART:SM00013 OMA:NGLPCPG GeneTree:ENSGT00680000099775
EMBL:AADN02029556 IPI:IPI00578668 ProteinModelPortal:F1NZH0
Ensembl:ENSGALT00000027326 Uniprot:F1NZH0
Length = 710
Score = 213 (80.0 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 64/253 (25%), Positives = 114/253 (45%)
Query: 15 VSACPTSCIC-KWKGGKQTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQ 70
+ +CP C C + G V C ++++ ++V+ + P N Q L N + T+ F
Sbjct: 354 ILSCPQICSCDQIPGSGLKVNCNDRNVSSLVD-LKPKPSNVQELFLRDNKIHTIRKSHFL 412
Query: 71 KMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTL 130
+NL + L I+ +++ F+ L +L L N L T+ + F +L L +
Sbjct: 413 DYRKLNL--LDLGNNNIATVENNTFKNLFDLRWLYMDSNYLDTLSREKFTGLQNLEYLNV 470
Query: 131 SGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSN 190
N I+ I G F + L L L+ + + F G+ SL L + NN + +
Sbjct: 471 EFNGIQLIMPGTFNAMPKLRVLILNNNLLRSLPVDVFAGV-SLSKLSIHNNYFMYLPVAG 529
Query: 191 ILP--TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLS 247
+L T + IDLH NPW C C ++ ++W E + + + + C P + LS
Sbjct: 530 VLDQLTSITQIDLHGNPWDCTCPIVPFKQWAEMLRPKVIMSDLRCESPEDFFKEDFESLS 589
Query: 248 IDELACEPQITPS 260
D + + +I+P+
Sbjct: 590 NDVICPQLKISPT 602
Score = 201 (75.8 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 71/272 (26%), Positives = 115/272 (42%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWK-------GGKQTVECVNKSLITVVEGMDPNTQV 53
M+ WI L+ T + + T +CK K G V+C K ++ P +Q
Sbjct: 19 MLLWILLLETSLCFAAGNVTGDVCKEKICACNEIEGDLHVDCEKKGFTSLQHFTAPTSQF 78
Query: 54 --LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L GN+L L +F N +++ + I AF GL + L ++N +
Sbjct: 79 YHLFLHGNSLTRLFPNEFANF--YNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKI 136
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ TF L L N ++ I GAF+ L+ L L L+ I + F +
Sbjct: 137 KSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFRDLNKLEVLILNDNLISTLPPNVFQYVP 196
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAI 228
+ L L N++ T+ +L G+ I L NPW C C L+ L+ WLE+ K +
Sbjct: 197 -ITHLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIG 255
Query: 229 DPICSVPPRLSSVTIKQLSIDELACEPQITPS 260
IC P RL + + + EL + ++ S
Sbjct: 256 RVICEAPTRLQGKDLNETTEQELCKKNRVDSS 287
>UNIPROTKB|Q50L44 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9031
"Gallus gallus" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0043491 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 OrthoDB:EOG40S0F8
EMBL:AB195262 IPI:IPI00607536 RefSeq:NP_001019748.1
UniGene:Gga.13113 HSSP:Q05793 ProteinModelPortal:Q50L44 SMR:Q50L44
STRING:Q50L44 Ensembl:ENSGALT00000004272 GeneID:415344
KEGG:gga:415344 CTD:84894 HOVERGEN:HBG057546 InParanoid:Q50L44
OMA:RIRDRKP NextBio:20818967 ArrayExpress:Q50L44 Uniprot:Q50L44
Length = 613
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 61/196 (31%), Positives = 98/196 (50%)
Query: 5 IFLIATIIK-IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
+ ++ +I+ + CP C C + ++ V C K + V EG+ T+ LD N +KT
Sbjct: 21 LLMLGSILSGSATGCPPRCECSAQ--ERAVLCHRKRFMVVPEGIPTETRQLDLGKNRIKT 78
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
L+ ++F +L+++ L+ IS I+ AF L NL L N L+ +P F
Sbjct: 79 LNQDEFANYP--HLEELELNENIISAIEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLS 136
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
+L KL +S N I + FQ L L +LE+ + I AF GL+SLE L L+ +
Sbjct: 137 NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNL 196
Query: 184 TTISGSNILPTGLHGI 199
T+I + + LHG+
Sbjct: 197 TSIPTEAL--SHLHGL 210
Score = 202 (76.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 81/299 (27%), Positives = 127/299 (42%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + S GL NL L +H L ++P +
Sbjct: 219 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTSNCLYGL-NLTSLSITHCNLTSIPYVS 275
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + +E AF GL+ L L +
Sbjct: 276 VRHLVYLRFLNLSYNPIVTIEGSMLHDLLRLQEIQLVGGQLTTVEPFAFRGLNYLRILNV 335
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRW-LESTKTPMAIDPICSV 234
N +TT+ S G L + L +NP CDC L+ + RRW L K P CS
Sbjct: 336 SGNLLTTLEESAFHSVGNLETLILDNNPLACDCRLLWVFRRRWRLNFNKQ----QPTCST 391
Query: 235 PPRLSSVTIKQ----LSIDELACE-PQIT---PSTFYLEIQEGKNVSLLCKVSAIPEAKI 286
P + K L + C +I P +++ EG V +C+ P I
Sbjct: 392 PEFVQGKEFKDFPDVLLPNYFTCRRARIRDRKPQQIFVD--EGHTVHFVCRADGDPPPAI 449
Query: 287 TWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
WL P + +S + + +GT L + + I DNGT++C+A N G+
Sbjct: 450 MWLS---P-RKHLISTKTNGRLTVFPDGT------LEVRYAQIQDNGTYLCIASNAGGN 498
Score = 129 (50.5 bits), Expect = 0.00011, P = 0.00011
Identities = 47/168 (27%), Positives = 72/168 (42%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L NL+ + L R+ +I F GL+NL LD S
Sbjct: 88 PHLEELELNENIISAIEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 145
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 146 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 205
Query: 169 GLDSLEWLKLDNNKITTISGSNILPT-GLHGIDLHHNPW----TCDCL 211
L L L+L + I I + L +++ H P+ T +CL
Sbjct: 206 HLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTSNCL 253
>UNIPROTKB|F1MBT2 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:DAAA02052480
IPI:IPI01003440 Ensembl:ENSBTAT00000031490 Uniprot:F1MBT2
Length = 614
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C + + V C K + V EG+ T++LD N +KTL+ ++F
Sbjct: 34 TGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFP-- 89
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+++ L+ +S ++ AF L NL L N L+ +P F +L KL +S N I
Sbjct: 90 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 149
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ FQ L L +LE+ + I AF GL+SLE L L+ +T+I + +
Sbjct: 150 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL--SH 207
Query: 196 LHGI 199
LHG+
Sbjct: 208 LHGL 211
Score = 202 (76.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 79/298 (26%), Positives = 124/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 220 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 276
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 277 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 336
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 337 SGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 393
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C +I + + EG V +C+ P I WL
Sbjct: 394 EFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 453
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 454 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 501
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 41/138 (29%), Positives = 60/138 (43%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L NL+ + L R+ +I F GL+NL LD S
Sbjct: 89 PHLEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 146
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 147 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 206
Query: 169 GLDSLEWLKLDNNKITTI 186
L L L+L + I I
Sbjct: 207 HLHGLIVLRLRHLNINAI 224
Score = 121 (47.7 bits), Expect = 0.00079, P = 0.00079
Identities = 55/202 (27%), Positives = 86/202 (42%)
Query: 36 VNKSLITVVE-GMDPNT---QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N+++++ VE G N + L N LK + F GL NL K+ +S +I ++
Sbjct: 96 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT--GLSNLTKLDISENKIVILL 153
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
F+ L NL L+ N L + F SL +LTL + I T A L L+
Sbjct: 154 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 213
Query: 152 LELSKCGIEVIEDAAFVGLDSLE------WLKLDNNKITTISGSNILPTGLHGIDLHHNP 205
L L I I D +F L L+ W LD + G N+ + +L P
Sbjct: 214 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 273
Query: 206 WTCDCLLIGLRRWLESTKTPMA 227
+ L+ LR +L + P++
Sbjct: 274 YLAVRHLVYLR-FLNLSYNPIS 294
>MGI|MGI:1915522 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing
1" species:10090 "Mus musculus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IMP;IDA] [GO:0031175 "neuron projection
development" evidence=IDA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IDA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:1915522 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0043491 GO:GO:0031175
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GO:GO:0021954 HSSP:P21809 GO:GO:0048715
GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 EMBL:AK027262 EMBL:AK163538
EMBL:BC052384 EMBL:BC065696 EMBL:AY324324 IPI:IPI00134200
RefSeq:NP_851419.1 UniGene:Mm.246605 ProteinModelPortal:Q9D1T0
SMR:Q9D1T0 IntAct:Q9D1T0 STRING:Q9D1T0 PhosphoSite:Q9D1T0
PaxDb:Q9D1T0 PRIDE:Q9D1T0 Ensembl:ENSMUST00000053568
Ensembl:ENSMUST00000114247 GeneID:235402 KEGG:mmu:235402
InParanoid:Q9D1T0 ChiTaRS:LINGO1 NextBio:382644 Bgee:Q9D1T0
Genevestigator:Q9D1T0 Uniprot:Q9D1T0
Length = 614
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C + + V C K + V EG+ T++LD N +KTL+ ++F
Sbjct: 34 TGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFP-- 89
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+++ L+ +S ++ AF L NL L N L+ +P F +L KL +S N I
Sbjct: 90 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 149
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ FQ L L +LE+ + I AF GL+SLE L L+ +T+I + +
Sbjct: 150 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL--SH 207
Query: 196 LHGI 199
LHG+
Sbjct: 208 LHGL 211
Score = 199 (75.1 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 79/298 (26%), Positives = 123/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 220 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 276
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 277 VRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 336
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 337 SGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 393
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C I + + EG V +C+ P I WL
Sbjct: 394 EFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 453
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 454 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 501
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 41/138 (29%), Positives = 60/138 (43%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L NL+ + L R+ +I F GL+NL LD S
Sbjct: 89 PHLEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 146
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 147 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 206
Query: 169 GLDSLEWLKLDNNKITTI 186
L L L+L + I I
Sbjct: 207 HLHGLIVLRLRHLNINAI 224
>UNIPROTKB|F1SJ87 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048715 "negative regulation of oligodendrocyte
differentiation" evidence=IEA] [GO:0043491 "protein kinase B
signaling cascade" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0021954 "central nervous system
neuron development" evidence=IEA] [GO:0005154 "epidermal growth
factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:CT954219
Ensembl:ENSSSCT00000002097 Uniprot:F1SJ87
Length = 620
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C + + V C K + V EG+ T++LD N +KTL+ ++F
Sbjct: 40 TGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFP-- 95
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+++ L+ +S ++ AF L NL L N L+ +P F +L KL +S N I
Sbjct: 96 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 155
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ FQ L L +LE+ + I AF GL+SLE L L+ +T+I + +
Sbjct: 156 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL--SH 213
Query: 196 LHGI 199
LHG+
Sbjct: 214 LHGL 217
Score = 202 (76.2 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 79/298 (26%), Positives = 124/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 226 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 282
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 283 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 342
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 343 SGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 399
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C +I + + EG V +C+ P I WL
Sbjct: 400 EFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 459
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 460 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 507
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 41/138 (29%), Positives = 60/138 (43%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L NL+ + L R+ +I F GL+NL LD S
Sbjct: 95 PHLEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 152
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 153 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 212
Query: 169 GLDSLEWLKLDNNKITTI 186
L L L+L + I I
Sbjct: 213 HLHGLIVLRLRHLNINAI 230
Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00080
Identities = 55/202 (27%), Positives = 86/202 (42%)
Query: 36 VNKSLITVVE-GMDPNT---QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N+++++ VE G N + L N LK + F GL NL K+ +S +I ++
Sbjct: 102 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT--GLSNLTKLDISENKIVILL 159
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
F+ L NL L+ N L + F SL +LTL + I T A L L+
Sbjct: 160 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 219
Query: 152 LELSKCGIEVIEDAAFVGLDSLE------WLKLDNNKITTISGSNILPTGLHGIDLHHNP 205
L L I I D +F L L+ W LD + G N+ + +L P
Sbjct: 220 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 279
Query: 206 WTCDCLLIGLRRWLESTKTPMA 227
+ L+ LR +L + P++
Sbjct: 280 YLAVRHLVYLR-FLNLSYNPIS 300
>UNIPROTKB|Q96FE5 [details] [associations]
symbol:LINGO1 "Leucine-rich repeat and immunoglobulin-like
domain-containing nogo receptor-interacting protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005154 "epidermal growth factor receptor binding"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0031175 "neuron projection
development" evidence=IEA] [GO:0043491 "protein kinase B signaling
cascade" evidence=IEA] [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050770 "regulation of
axonogenesis" evidence=TAS] [GO:0050771 "negative regulation of
axonogenesis" evidence=TAS] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
GO:GO:0005886 Reactome:REACT_111102 GO:GO:0048011 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
EMBL:CH471136 GO:GO:0043491 GO:GO:0031175 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0050771
GO:GO:0021954 MEROPS:I43.001 GO:GO:0048715 Orphanet:862
OrthoDB:EOG40S0F8 CTD:84894 HOVERGEN:HBG057546 OMA:RIRDRKP
EMBL:AY324320 EMBL:AY324322 EMBL:AY324323 EMBL:AY358284
EMBL:AK027500 EMBL:AK291363 EMBL:BC011057 EMBL:BC068558
EMBL:AL834260 IPI:IPI00465325 IPI:IPI00795326 RefSeq:NP_116197.4
UniGene:Hs.656765 UniGene:Hs.736275 PDB:2ID5 PDBsum:2ID5
ProteinModelPortal:Q96FE5 SMR:Q96FE5 IntAct:Q96FE5
MINT:MINT-1378183 STRING:Q96FE5 PhosphoSite:Q96FE5 PaxDb:Q96FE5
PRIDE:Q96FE5 Ensembl:ENST00000355300 Ensembl:ENST00000561030
GeneID:84894 KEGG:hsa:84894 UCSC:uc002bct.1 GeneCards:GC15M077905
H-InvDB:HIX0012466 HGNC:HGNC:21205 HPA:HPA011630 MIM:609791
neXtProt:NX_Q96FE5 PharmGKB:PA162394087 InParanoid:Q96FE5
EvolutionaryTrace:Q96FE5 GenomeRNAi:84894 NextBio:75236 Bgee:Q96FE5
CleanEx:HS_LINGO1 Genevestigator:Q96FE5 Uniprot:Q96FE5
Length = 620
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C + + V C K + V EG+ T++LD N +KTL+ ++F
Sbjct: 40 TGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFP-- 95
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+++ L+ +S ++ AF L NL L N L+ +P F +L KL +S N I
Sbjct: 96 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 155
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ FQ L L +LE+ + I AF GL+SLE L L+ +T+I + +
Sbjct: 156 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL--SH 213
Query: 196 LHGI 199
LHG+
Sbjct: 214 LHGL 217
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 79/298 (26%), Positives = 124/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 226 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 282
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 283 VRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 342
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 343 SGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 399
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C +I + + EG V +C+ P I WL
Sbjct: 400 EFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 459
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 460 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 507
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 41/138 (29%), Positives = 60/138 (43%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L NL+ + L R+ +I F GL+NL LD S
Sbjct: 95 PHLEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 152
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 153 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 212
Query: 169 GLDSLEWLKLDNNKITTI 186
L L L+L + I I
Sbjct: 213 HLHGLIVLRLRHLNINAI 230
Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00080
Identities = 55/202 (27%), Positives = 86/202 (42%)
Query: 36 VNKSLITVVE-GMDPNT---QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N+++++ VE G N + L N LK + F GL NL K+ +S +I ++
Sbjct: 102 LNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT--GLSNLTKLDISENKIVILL 159
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
F+ L NL L+ N L + F SL +LTL + I T A L L+
Sbjct: 160 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIV 219
Query: 152 LELSKCGIEVIEDAAFVGLDSLE------WLKLDNNKITTISGSNILPTGLHGIDLHHNP 205
L L I I D +F L L+ W LD + G N+ + +L P
Sbjct: 220 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 279
Query: 206 WTCDCLLIGLRRWLESTKTPMA 227
+ L+ LR +L + P++
Sbjct: 280 YLAVRHLVYLR-FLNLSYNPIS 300
>UNIPROTKB|G3V881 [details] [associations]
symbol:Lingo1 "Leucine rich repeat neuronal 6A, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0048715 "negative
regulation of oligodendrocyte differentiation" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 EMBL:CH473975
GeneTree:ENSGT00690000101682 CTD:84894 RefSeq:NP_001094192.1
UniGene:Rn.20269 ProteinModelPortal:G3V881 SMR:G3V881 PRIDE:G3V881
Ensembl:ENSRNOT00000023084 GeneID:315691 KEGG:rno:315691
NextBio:669664 Uniprot:G3V881
Length = 620
Score = 211 (79.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 58/184 (31%), Positives = 92/184 (50%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C + + V C K + V EG+ T++LD N +KTL+ ++F
Sbjct: 40 TGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFP-- 95
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+++ L+ +S ++ AF L NL L N L+ +P F +L KL +S N I
Sbjct: 96 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 155
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+ FQ L L +LE+ + I AF GL+SLE L L+ +T+I + +
Sbjct: 156 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL--SH 213
Query: 196 LHGI 199
LHG+
Sbjct: 214 LHGL 217
Score = 199 (75.1 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 79/298 (26%), Positives = 123/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 226 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 282
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 283 VRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 342
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 343 SGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 399
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C I + + EG V +C+ P I WL
Sbjct: 400 EFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 459
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 460 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 507
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 41/138 (29%), Positives = 60/138 (43%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L NL+ + L R+ +I F GL+NL LD S
Sbjct: 95 PHLEELELNENIVSAVEPGAFNN--LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 152
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 153 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 212
Query: 169 GLDSLEWLKLDNNKITTI 186
L L L+L + I I
Sbjct: 213 HLHGLIVLRLRHLNINAI 230
>UNIPROTKB|E1BV71 [details] [associations]
symbol:ECM2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005614 "interstitial matrix" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0010811 "positive regulation of
cell-substrate adhesion" evidence=IEA] [GO:0030198 "extracellular
matrix organization" evidence=IEA] [GO:0070052 "collagen V binding"
evidence=IEA] InterPro:IPR001611 InterPro:IPR001007 Pfam:PF00093
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51450 SMART:SM00214
GO:GO:0030198 GO:GO:0008201 GO:GO:0010811
GeneTree:ENSGT00700000104006 GO:GO:0005614 CTD:1842 KO:K08119
OMA:AVWSPKP EMBL:AADN02013900 IPI:IPI00573040 RefSeq:XP_414297.2
UniGene:Gga.53618 Ensembl:ENSGALT00000007480 GeneID:415953
KEGG:gga:415953 Uniprot:E1BV71
Length = 704
Score = 204 (76.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 67/194 (34%), Positives = 93/194 (47%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
+ A P C + TV C+N L + DP+ LD TGN + T+ NE F G+
Sbjct: 303 IEAPPLPAACSTS--ESTVSCINAKLTQIPPISDPDLTSLDLTGNIITTISNEAFN--GI 358
Query: 75 VNLQKIYLSRCRISV--IDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
NL+ I LS+ IS I AF+ L L L N+L +PS+ P +L ++ ++
Sbjct: 359 PNLEWIDLSKNNISSSGIGPHAFKTLKKLKRLYLDGNMLVHIPSE-LPS--TLEEIKIND 415
Query: 133 NPIKQIKTGAFQPLSYLVTLEL--SKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSN 190
N + I A Q L LVTLEL +K + AF L SL +L+L NK I
Sbjct: 416 NQLHAIDEDALQGLKNLVTLELEGNKLSEANVSPLAFYPLKSLSYLRLGRNKFRIIPQG- 474
Query: 191 ILPTGLHGIDLHHN 204
LPT L + L +N
Sbjct: 475 -LPTTLEELYLENN 487
Score = 56 (24.8 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 531 SQCQEWGNVCYNRMQPMQHIVLNNVYNQPADIHLTPEKFMDRDGYP-VDFGLPKVPTHFP 589
+Q +E +C+N + + IVL +N+ + + P +++++ +D K+ H P
Sbjct: 487 NQIEEVSEICFNHTRKINVIVLK--HNKLEEHRIAPLAWINQENLESIDLSYNKL-YHVP 543
Query: 590 ALVPATAYYRTL 601
+ +P + + L
Sbjct: 544 SYLPKSLLHLIL 555
>ZFIN|ZDB-GENE-041111-75 [details] [associations]
symbol:lrig2 "leucine-rich repeats and
immunoglobulin-like domains 2" species:7955 "Danio rerio"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 ZFIN:ZDB-GENE-041111-75 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 EMBL:CR391948 IPI:IPI00901536
Ensembl:ENSDART00000112700 Uniprot:E7F013
Length = 1044
Score = 214 (80.4 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 77/306 (25%), Positives = 132/306 (43%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
++L NN+ + + ++ L+++ LS +S ++ F GL+ L L+ N +
Sbjct: 248 RILRVNQNNIGLIRADAWEFCH--RLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQI 305
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIK-QIKT--GAFQPLSYLVTLELSKCGIEVIEDAAFV 168
+ F ++ L + N I I+ G F L L +L L I I AF
Sbjct: 306 SHLGEGVFSSLANVRTLDIRNNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTITKRAFE 365
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI 228
GL LE L L N I +I L +DL+ + CDC L L +WL +++ +
Sbjct: 366 GLMELENLDLSKNGIMSIHPDAFTHLKLKTLDLNSSSLLCDCQLQWLGQWLINSRFQQSC 425
Query: 229 DPICSVPPRLSSVTIKQLSIDELAC----EPQITPSTFYLEIQEGKNVSLLCKVSAIPEA 284
+C+ P L+ ++ + +E C +PQIT G NV+L C + ++
Sbjct: 426 TAVCAHPASLAGSSVLAVKPEEFVCSDFPKPQITAHPKTAVALRGTNVTLNCSAFSSSDS 485
Query: 285 KIT--WLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQ 342
++ W DG + + +++A Y + + + L + N N D G + CV N
Sbjct: 486 PMSTAWRKDGEVLYEAQV---QNYARYQDQR--LLYTTILHLLNVNFTDEGQYQCVLSNH 540
Query: 343 AGSTSS 348
GS S
Sbjct: 541 FGSNYS 546
Score = 146 (56.5 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 47/184 (25%), Positives = 86/184 (46%)
Query: 5 IFLIATIIKIVSACPTSCICKW-KGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
+FL+ + + CP+ C C G Q ++C N+ +T ++ V + N
Sbjct: 11 LFLLIVSVVGLDTCPSPCSCSGGPGAAQLLDC-NRKRLTAA-ALEAPAWVT-HASINQNE 67
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
L F N+ + L RIS + ++ ++L LD S N + + + +FP P
Sbjct: 68 LTAVPFLGDASSNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFP--P 125
Query: 124 SLMK-LTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNK 182
+K L LS N I ++ G F +S L+ L++++ + ++ D F L L+ L+L N+
Sbjct: 126 MQLKYLNLSKNKISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNR 184
Query: 183 ITTI 186
I +
Sbjct: 185 IRVV 188
Score = 145 (56.1 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
Identities = 45/163 (27%), Positives = 83/163 (50%)
Query: 37 NKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKA 94
N+ V E + P + + LD + N++ L F M L+ + LS+ +IS ++
Sbjct: 89 NRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPM---QLKYLNLSKNKISSLEPGC 145
Query: 95 FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLEL 154
F +++L+ L + N L +P F L L L N I+ +++ F+ L L +L++
Sbjct: 146 FGNISSLLVLKINQNRLSLLPDKVFT-LSQLQVLELRRNRIRVVESLIFKELKALKSLKM 204
Query: 155 SKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLH 197
+ GI + D A GL+++E L+L+ N +T ++ + GLH
Sbjct: 205 QRNGITKLMDGALFGLENMEELELEYNNLTELNKGWLY--GLH 245
Score = 137 (53.3 bits), Expect = 3.1e-10, Sum P(2) = 3.1e-10
Identities = 49/155 (31%), Positives = 74/155 (47%)
Query: 36 VNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAF 95
+ K + + G++ N + L+ NNL L+ K GL L+ + +++ I +I + A+
Sbjct: 209 ITKLMDGALFGLE-NMEELELEYNNLTELN--KGWLYGLHMLRILRVNQNNIGLIRADAW 265
Query: 96 RGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELS 155
L +LD S N L + F L L L N I + G F L+ + TL++
Sbjct: 266 EFCHRLEELDLSFNHLSRLEDWVFAGLSLLQSLNLGDNQISHLGEGVFSSLANVRTLDIR 325
Query: 156 KCGIEV-IED--AAFVGLDSLEWLKLDNNKITTIS 187
I + IED FVGL L L L NNKI TI+
Sbjct: 326 NNEISLAIEDFIGMFVGLKRLNSLVLQNNKIRTIT 360
Score = 129 (50.5 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 99 TNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCG 158
+N+ L HN + V ++ Y SL L LS N I ++K G+F P+ L L LSK
Sbjct: 79 SNITVLSLVHNRISEVVAEQLLPYSSLESLDLSSNSISELKAGSFPPMQ-LKYLNLSKNK 137
Query: 159 IEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGIDLHHN 204
I +E F + SL LK++ N+++ + + L ++L N
Sbjct: 138 ISSLEPGCFGNISSLLVLKINQNRLSLLPDKVFTLSQLQVLELRRN 183
Score = 109 (43.4 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 39/155 (25%), Positives = 75/155 (48%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
QVL+ N ++ + + F++ L L+ + + R I+ + A GL N+ +L+ +N L
Sbjct: 176 QVLELRRNRIRVVESLIFKE--LKALKSLKMQRNGITKLMDGALFGLENMEELELEYNNL 233
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+ L L ++ N I I+ A++ L L+LS + +ED F GL
Sbjct: 234 TELNKGWLYGLHMLRILRVNQNNIGLIRADAWEFCHRLEELDLSFNHLSRLEDWVFAGLS 293
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHN 204
L+ L L +N+I+ + G + + + +D+ +N
Sbjct: 294 LLQSLNLGDNQISHL-GEGVFSSLANVRTLDIRNN 327
Score = 101 (40.6 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 38/158 (24%), Positives = 73/158 (46%)
Query: 31 QTVECVNKSLITVVEGMDPNTQV--LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRIS 88
++++ + S+ + G P Q+ L+ + N + +L F + + + KI ++ R+S
Sbjct: 106 ESLDLSSNSISELKAGSFPPMQLKYLNLSKNKISSLEPGCFGNISSLLVLKI--NQNRLS 163
Query: 89 VIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSY 148
++ K F L+ L L+ N ++ V S F + +L L + N I ++ GA L
Sbjct: 164 LLPDKVFT-LSQLQVLELRRNRIRVVESLIFKELKALKSLKMQRNGITKLMDGALFGLEN 222
Query: 149 LVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
+ LEL + + GL L L+++ N I I
Sbjct: 223 MEELELEYNNLTELNKGWLYGLHMLRILRVNQNNIGLI 260
Score = 98 (39.6 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 242 TIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
T+ +L+++EL P + L I+ G L C P +I W DG I +
Sbjct: 547 TLAKLTVNEL---PTFLKTPMDLTIRTGTVARLECAAEGHPTPQIAWQKDG-GINFPAAR 602
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
H + ++ T I N +D G + C A+N+AGS S+N T+ ++
Sbjct: 603 ERRMHVM--PDDDT------FFIANVKAEDMGVYSCTAKNEAGSLSANATLTVL 648
Score = 49 (22.3 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 16/80 (20%), Positives = 30/80 (37%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ G+ L C P ++ W D P+ +E H + + L+I
Sbjct: 662 VARGETAVLQCIARGSPAPRLNWTKDDAPLV-----LTERHFFAAANQ-------LLIIV 709
Query: 326 NSNIDDNGTFVCVAENQAGS 345
++ D G + C+ N G+
Sbjct: 710 DAGPADAGKYTCIMSNTLGT 729
>UNIPROTKB|O14498 [details] [associations]
symbol:ISLR "Immunoglobulin superfamily containing
leucine-rich repeat protein" species:9606 "Homo sapiens"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=TAS] InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 GO:GO:0005576 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG240332 OrthoDB:EOG4QC14W CTD:3671
HOGENOM:HOG000113109 HOVERGEN:HBG100853 OMA:HGKAVEG EMBL:AB003184
EMBL:AB024536 EMBL:AB024537 EMBL:AY358871 IPI:IPI00023648
RefSeq:NP_005536.1 RefSeq:NP_958934.1 UniGene:Hs.699822
UniGene:Hs.733168 ProteinModelPortal:O14498 SMR:O14498
STRING:O14498 PaxDb:O14498 PeptideAtlas:O14498 PRIDE:O14498
DNASU:3671 Ensembl:ENST00000249842 Ensembl:ENST00000395118
GeneID:3671 KEGG:hsa:3671 UCSC:uc002axg.1 GeneCards:GC15P074466
HGNC:HGNC:6133 HPA:HPA050811 MIM:602059 neXtProt:NX_O14498
PharmGKB:PA29933 InParanoid:O14498 PhylomeDB:O14498 ChiTaRS:ISLR
GenomeRNAi:3671 NextBio:14367 Bgee:O14498 CleanEx:HS_ISLR
Genevestigator:O14498 Uniprot:O14498
Length = 428
Score = 207 (77.9 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 75/304 (24%), Positives = 128/304 (42%)
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
N+ + LS R+ + AFR + L L +HN ++TV + L L LS N I
Sbjct: 51 NVTTLSLSANRLPGLPEGAFREVPLLQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLI 110
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-T 194
LS L L++ + I AF L +L L+L++N++ T++ P T
Sbjct: 111 SDFAWSDLHNLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLT 170
Query: 195 GLHGIDLHHNPWTCDCLLIGLRRWLESTKT--PMAIDPICSVPPRLSSVTIKQLSIDELA 252
L + ++ NP+ C C ++ L+ W +T P + C+ P L + +L L
Sbjct: 171 ALSHLQINENPFDCTCGIVWLKTWALTTAVSIPEQDNIACTSPHVLKGTPLSRLP--PLP 228
Query: 253 CE-PQIT----PSTFYLEIQEGKNVSLLCKVSAIPEAKITW---LFDGVPIQNESMSASE 304
C P + PS E++ G ++L C V P ++ W + G+ ++
Sbjct: 229 CSAPSVQLSYQPSQDGAELRPGFVLALHCDVDGQPAPQLHWHIQIPSGIVEITSPNVGTD 288
Query: 305 SHAVYSTEEGTE------IKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
A+ T + LLI + + GT+ C+A N+ GS S+ + +
Sbjct: 289 GRALPGTPVASSQPRFQAFANGSLLIPDFGKLEEGTYSCLATNELGSAESSVDVALATPG 348
Query: 359 ENVE 362
E E
Sbjct: 349 EGGE 352
Score = 189 (71.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 49/188 (26%), Positives = 85/188 (45%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+++W L+ + ACP C C K G Q +C + L +V G N L + N
Sbjct: 6 LLWWALLLG----LAQACPEPCDCGEKYGFQIADCAYRDLESVPPGFPANVTTLSLSANR 61
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
L L F+++ L LQ ++L+ I + + A L++L LD SHN++
Sbjct: 62 LPGLPEGAFREVPL--LQSLWLAHNEIRTVAAGALASLSHLKSLDLSHNLISDFAWSDLH 119
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
+ +L L + N + I AF+ L L +L+L+ + + + F L +L L+++
Sbjct: 120 NLSALQLLKMDSNELTFIPRDAFRSLRALRSLQLNHNRLHTLAEGTFTPLTALSHLQINE 179
Query: 181 NKITTISG 188
N G
Sbjct: 180 NPFDCTCG 187
Score = 44 (20.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 660 VTFTEPLHILQGQPMQSNPP 679
+ T P H+L+G P+ PP
Sbjct: 208 IACTSP-HVLKGTPLSRLPP 226
>UNIPROTKB|E2QXI6 [details] [associations]
symbol:TPBG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00620000088023 OMA:HNGTLAE
EMBL:AAEX03008490 Ensembl:ENSCAFT00000004602 Uniprot:E2QXI6
Length = 420
Score = 136 (52.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 37/140 (26%), Positives = 65/140 (46%)
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L+GN + L L L+L + + +F L LE L L++N +
Sbjct: 212 LQCLELAGNRFLYLPRDVLAQLPGLRHLDLRNNSLVSLTYVSFRNLTHLESLHLEDNALK 271
Query: 185 TISGSNI--LPTGLH-GIDLHHNPWTCDCLLIGLRRWLESTKT-PMAIDPICSVPPRLSS 240
+ + + L + H + L +NPW CDC + + WL+ T+ P C+ P ++ +
Sbjct: 272 VLHNATLAELQSLPHVRVFLDNNPWVCDCHMADMVAWLKETEVVPGKAGLTCAFPEKMRN 331
Query: 241 VTIKQLSIDELACEPQITPS 260
+ +L+ L C+P + PS
Sbjct: 332 RALLELNSSHLDCDPILPPS 351
Score = 120 (47.3 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/103 (33%), Positives = 49/103 (47%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKF-QKMGLVN 76
CP C C +TV+CVN++L V + P + L TGN L L F ++ L
Sbjct: 62 CPQPCECS--EAARTVKCVNRNLTEVPADLPPYVRNLFLTGNQLAVLPPGAFARRPPLAE 119
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L + LS + + + AF L +L LD SHN L + + F
Sbjct: 120 LAALNLSGSSLREVCAGAFEHLPSLRQLDLSHNPLGNLSAFAF 162
>ZFIN|ZDB-GENE-040426-1227 [details] [associations]
symbol:mb21d2b "Mab-21 domain containing 2b"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045202 "synapse" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-040426-1227
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 GeneTree:ENSGT00660000095307 EMBL:CABZ01031876
EMBL:CABZ01031877 EMBL:CABZ01072581 EMBL:CU499339 IPI:IPI00995611
Ensembl:ENSDART00000124704 Uniprot:E7EZ70
Length = 742
Score = 211 (79.3 bits), Expect = 1.8e-13, P = 1.8e-13
Identities = 89/347 (25%), Positives = 153/347 (44%)
Query: 30 KQTVEC-VNKSLITVVEGMD-PN-TQVLDYT--GNNLKTLHNEKFQKMGLVNLQKIYLSR 84
++TVE + + IT V D N T ++ T N + + F MGL +L+ +++
Sbjct: 51 RKTVELRLTDNFITAVRRKDFLNMTSLVHLTLSRNTISQIAPHAF--MGLKSLRALHMDG 108
Query: 85 CRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMK-LTLSGNPIKQIKTGAF 143
R+SVI+S +GL NL L +N + + +F ++ + ++ L LS N ++ + A
Sbjct: 109 NRLSVINSNQLKGLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAI 168
Query: 144 QPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL--------P-T 194
++ + TL L I+ I F L L L + +N++ T+ + P T
Sbjct: 169 ARMTNINTLTLDHNLIDHIGVGTFTLLTKLVRLDMTSNRLQTLPPDTLFQHAQVLSEPKT 228
Query: 195 GLHG---IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDEL 251
+ NP C+C L+ LRR C+ P L + +E
Sbjct: 229 SSSSRLTVSFGGNPLHCNCELLWLRRLTREDDLET-----CASPEHLMDKYFWSIQEEEF 283
Query: 252 ACEPQITPSTFYLE--IQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAV 308
CEP + + + EG+ V+L CK P+ I W F DG + N S + +
Sbjct: 284 ICEPPLITKHQVTKPYVMEGQGVTLKCKAMGDPDPAIHWRFPDGKLVHNNSRTI-----L 338
Query: 309 YSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
Y + GT ++LI + + D+G F CVA N AG ++ + ++
Sbjct: 339 Y--DNGT----LDILI--TTLKDSGAFNCVASNAAGIATAAVHVHMI 377
Score = 164 (62.8 bits), Expect = 2.3e-08, P = 2.3e-08
Identities = 55/206 (26%), Positives = 91/206 (44%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+++ + + + K CP CIC+ T+ C L+ V +D T L T N
Sbjct: 4 LVFCVLVFGALAK-AQLCPGRCICQTISPTLTLLCAKTGLLFVPPTVDRKTVELRLTDNF 62
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
+ + + F + + +L + LSR IS I AF GL +L L N L + S+
Sbjct: 63 ITAVRRKDF--LNMTSLVHLTLSRNTISQIAPHAFMGLKSLRALHMDGNRLSVINSNQLK 120
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQP-LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
+L L L N I I+ +F ++ + L+LS + + A + ++ L LD
Sbjct: 121 GLMNLRHLILGNNQIHHIEESSFDEFVATIEDLDLSYNNLRTLPWEAIARMTNINTLTLD 180
Query: 180 NNKITTIS-GSNILPTGLHGIDLHHN 204
+N I I G+ L T L +D+ N
Sbjct: 181 HNLIDHIGVGTFTLLTKLVRLDMTSN 206
>UNIPROTKB|F1NVW6 [details] [associations]
symbol:F1NVW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000902 "cell morphogenesis" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0007599 "hemostasis"
evidence=IEA] [GO:0031362 "anchored to external side of plasma
membrane" evidence=IEA] [GO:0042730 "fibrinolysis" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042730 InterPro:IPR003591
SMART:SM00369 GO:GO:0007155 InterPro:IPR000372 SMART:SM00013
GO:GO:0031362 GeneTree:ENSGT00690000102197 EMBL:AADN02063514
EMBL:AADN02063515 IPI:IPI00571680 ProteinModelPortal:F1NVW6
Ensembl:ENSGALT00000035204 OMA:LTENPWH Uniprot:F1NVW6
Length = 225
Score = 186 (70.5 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 55/170 (32%), Positives = 80/170 (47%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
Q LD + N L+ + E L +L+++ LS + + A +GL L L +HN L
Sbjct: 56 QDLDLSDNGLQAVLTEA----ALPSLKELLLSHNALEALP--ALQGLPALTRLALAHNKL 109
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
Q + F P L L L GN ++ + AF L L L+LS +E + L
Sbjct: 110 QALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNALEELPRGLLQDLV 169
Query: 172 SLEWLKLDNNKITTISGSNILPTG-LHG-IDLHHNPWTCDCLLIGLRRWL 219
+LE L L N++ + S P G L + L NPW CDC L+ LR W+
Sbjct: 170 TLETLWLSGNRLRALP-SGFFPEGHLFAYVFLTENPWHCDCDLVYLRSWI 218
Score = 164 (62.8 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 50/168 (29%), Positives = 82/168 (48%)
Query: 18 CPT--SCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
CP+ C C TV C + L V G+ NT +L N L ++ FQK L
Sbjct: 2 CPSRDGCSCP------TVNCTGRDLSAVPAGLPENTGILLLNANRLLSVSTAAFQK--LA 53
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
LQ + LS + + ++A L +L +L SHN L+ +P+ P+L +L L+ N +
Sbjct: 54 ALQDLDLSDNGLQAVLTEA--ALPSLKELLLSHNALEALPA--LQGLPALTRLALAHNKL 109
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
+ + AF+ + L L+L + + + AF+GL L+ L L +N +
Sbjct: 110 QALAPAAFRAVPQLQDLDLRGNALRTLPEDAFMGLRVLKDLDLSDNAL 157
>UNIPROTKB|F1RR92 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
Pfam:PF01463 GO:GO:0051414 GeneTree:ENSGT00700000104083
GO:GO:0050919 GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:CU640426
Ensembl:ENSSSCT00000018524 Uniprot:F1RR92
Length = 1340
Score = 214 (80.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 55/170 (32%), Positives = 92/170 (54%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
ISV+++ F+ L NL ++ S+N ++ V F S+ +L L+GN ++ + F+
Sbjct: 360 ISVLEATGVFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRG 419
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + FVGL S+ L L +N+I+TI+ G+ L I+L N
Sbjct: 420 LSGLKTLMLRSNLISCVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSN 479
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C L L +WL + ++ +P C P L + I+ ++I + CE
Sbjct: 480 PFNCNCHLAWLGKWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCE 528
Score = 183 (69.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 55/176 (31%), Positives = 78/176 (44%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + +D F SL L L GN I +I
Sbjct: 125 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEI 184
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 185 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQ 244
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 245 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 299
Score = 152 (58.6 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 44/165 (26%), Positives = 74/165 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP++C C V+C K L + + + N++K++ F +
Sbjct: 93 SCPSACTCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYK--K 146
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I + AF+GL +L L N + +P F SL L L+ N I
Sbjct: 147 LKRIDISKNQISDIAADAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 206
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L +++ L L N
Sbjct: 207 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 251
Score = 137 (53.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 46/162 (28%), Positives = 73/162 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEK--FQKMGLV 75
CP C C + V C N+ L + G+ + L GN+L + E F+ + L+
Sbjct: 542 CPEQCTCV----ETVVRCSNRGLRALPRGIPKDVTELYLEGNHLTAVPRELSIFRHLTLI 597
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L S I ++ + F +++L L S+N L+ +P +F SL LTL GN I
Sbjct: 598 DL-----SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPIHSFNGLRSLRVLTLHGNDI 652
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
+ G+F L+ L L L + D + L EW+K
Sbjct: 653 SSVPEGSFNDLTSLSHLALGTNPLHC--DCSLRWLS--EWVK 690
Score = 136 (52.9 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 51/165 (30%), Positives = 69/165 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH-NEKFQKMGLVN 76
CP C C+ G V+C N+ L V + L N + L F+K L N
Sbjct: 321 CPDKCRCE--G--TIVDCSNQKLARVPSHLPEYVTDLRLNDNEISVLEATGVFKK--LPN 374
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L+KI LS +I + AF G ++ +L + N L+TV F L L L N I
Sbjct: 375 LRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSGLKTLMLRSNLIS 434
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 435 CVSNDTFVGLSSVRLLSLYDNRISTITPGAFTTLVSLSTINLLSN 479
Score = 127 (49.8 bits), Expect = 0.00047, P = 0.00047
Identities = 48/143 (33%), Positives = 67/143 (46%)
Query: 96 RGLT-NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLEL 154
RG+ ++ +L N L VP + + L + LS N I + F +S+L TL L
Sbjct: 565 RGIPKDVTELYLEGNHLTAVPRE-LSIFRHLTLIDLSNNSIGMLTNYTFSNMSHLSTLIL 623
Query: 155 SKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGS-NILPTGLHGIDLHHNPWTCDCLL 212
S + I +F GL SL L L N I+++ GS N L T L + L NP CDC L
Sbjct: 624 SYNRLRCIPIHSFNGLRSLRVLTLHGNDISSVPEGSFNDL-TSLSHLALGTNPLHCDCSL 682
Query: 213 IGLRRWLESTKTPMAIDPICSVP 235
L W+++ I CS P
Sbjct: 683 RWLSEWVKAGYKEPGIAR-CSSP 704
Score = 38 (18.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 612 NNRYS--REAEFLSRSSQPASYEHYAPADV 639
N R S + +F +Q + Y H ADV
Sbjct: 286 NKRISQIKSKKFRCSGNQDSQYRHLLVADV 315
>MGI|MGI:1917780 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:1917780
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0030054 GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 MEROPS:I43.001 EMBL:CH466559 HOGENOM:HOG000237343
HOVERGEN:HBG052352 GeneTree:ENSGT00660000095307 CTD:57497
eggNOG:NOG311542 KO:K16355 OMA:HWVAPDD OrthoDB:EOG469QT6
EMBL:AK017594 EMBL:AK044375 EMBL:AK122476 EMBL:BC139418
IPI:IPI00330152 RefSeq:NP_081728.2 UniGene:Mm.133607
ProteinModelPortal:Q80TG9 SMR:Q80TG9 IntAct:Q80TG9 STRING:Q80TG9
PhosphoSite:Q80TG9 PRIDE:Q80TG9 Ensembl:ENSMUST00000046254
GeneID:70530 KEGG:mmu:70530 UCSC:uc008cyd.2 InParanoid:Q80TG9
NextBio:331801 Bgee:Q80TG9 Genevestigator:Q80TG9
GermOnline:ENSMUSG00000040490 Uniprot:Q80TG9
Length = 788
Score = 211 (79.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 87/319 (27%), Positives = 138/319 (43%)
Query: 51 TQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV 110
T ++D T + H + F + L +L+ ++L R+ + RGL NL L ++N
Sbjct: 76 TGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQ 135
Query: 111 LQTVPSDTFPDYP-SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L + D F D+ +L L LS N + + + + + L L L ++ I + F
Sbjct: 136 LGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFAD 195
Query: 170 LDSLEWLKLDNNKITTI--------SGSNILPTGLHGIDLHH----NPWTCDCLLIGLRR 217
L L L L +N++ + S +++L L NP C+C L+ LRR
Sbjct: 196 LQKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGNPLHCNCELLWLRR 255
Query: 218 WLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQ-ITPSTFYLEIQEGKNVSLLC 276
LE ++ C P L + +E CEP IT T L + EG+ +L C
Sbjct: 256 -LERDDD---LET-CGSPGSLKGRYFWHIREEEFVCEPPLITQHTHKLLVLEGQAATLKC 310
Query: 277 KVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFV 336
K P I W+ P + + S AVY + GT ++LI S D+G F
Sbjct: 311 KAIGDPSPLIHWV---AP-DDRLVGNSSRTAVY--DNGT----LDILITTSQ--DSGPFT 358
Query: 337 CVAENQAGSTSSNYTIRIV 355
C+A N AG ++ + IV
Sbjct: 359 CIAANAAGEATATVEVSIV 377
Score = 142 (55.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 14 IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKM- 72
+V ACP C+C+ C +K L+ V +D T L GN + + + F M
Sbjct: 17 VVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMT 76
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GLV+L LSR IS I +F L +L L N L ++ DT +L L ++
Sbjct: 77 GLVDLT---LSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNN 133
Query: 133 NPIKQIKTGAFQPLSYLVTLE---LSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
N + I AF+ +L+TLE LS + + + + +L L LD+N + I+
Sbjct: 134 NQLGGIADDAFE--DFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIA 189
>UNIPROTKB|Q86SJ2 [details] [associations]
symbol:AMIGO2 "Amphoterin-induced protein 2" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007156 "homophilic cell
adhesion" evidence=ISS] [GO:0007157 "heterophilic cell-cell
adhesion" evidence=ISS] [GO:0043069 "negative regulation of
programmed cell death" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 EMBL:AY237005 GO:GO:0016021
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043069
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 eggNOG:NOG146733
HOGENOM:HOG000231327 HOVERGEN:HBG080231 GO:GO:0007156 EMBL:AB079074
EMBL:AB080610 EMBL:AY454159 EMBL:AL833007 EMBL:BC014103
EMBL:BC047595 EMBL:BC095477 IPI:IPI00238262 RefSeq:NP_001137140.1
RefSeq:NP_862830.1 UniGene:Hs.121520 ProteinModelPortal:Q86SJ2
SMR:Q86SJ2 IntAct:Q86SJ2 STRING:Q86SJ2 DMDM:68052338
PeptideAtlas:Q86SJ2 PRIDE:Q86SJ2 Ensembl:ENST00000266581
Ensembl:ENST00000321382 Ensembl:ENST00000429635
Ensembl:ENST00000550413 GeneID:347902 KEGG:hsa:347902
UCSC:uc001rpk.3 CTD:347902 GeneCards:GC12M047469 HGNC:HGNC:24073
HPA:HPA054004 neXtProt:NX_Q86SJ2 PharmGKB:PA142672626
InParanoid:Q86SJ2 OMA:SCIAMNR OrthoDB:EOG43XV36 PhylomeDB:Q86SJ2
GenomeRNAi:347902 NextBio:99311 ArrayExpress:Q86SJ2 Bgee:Q86SJ2
CleanEx:HS_AMIGO2 Genevestigator:Q86SJ2 GermOnline:ENSG00000139211
Uniprot:Q86SJ2
Length = 522
Score = 208 (78.3 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 97/362 (26%), Positives = 147/362 (40%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CPT+CIC V C NK+L V + + LD + N + L +E + + L
Sbjct: 41 CPTACIC----ATDIVSCTNKNLSKVPGNLFRLIKRLDLSYNRIGLLDSE-WIPVSFAKL 95
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ L I+ I + +F NL LD S N L+TV + F + L L L N I
Sbjct: 96 NTLILRHNNITSISTGSFSTTPNLKCLDLSSNKLKTVKNAVFQELKVLEVLLLYNNHISY 155
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG---LDSLEWLKLDNNKITTISGS--NIL 192
+ AF LS L L LS + +VG L L +L + N+I ++ N++
Sbjct: 156 LDPSAFGGLSQLQKLYLSGNFLTQFPMDLYVGRFKLAELMFLDVSYNRIPSMPMHHINLV 215
Query: 193 P-TGLHGIDLHHNPWTCDCLLIGLRR-WLE---STKTPMAIDPICSV-PPRLSSVTIKQL 246
P L GI LH NP+ CDC L L W S+ D C + S + L
Sbjct: 216 PGKQLRGIYLHGNPFVCDCSLYSLLVFWYRRHFSSVMDFKNDYTCRLWSDSRHSRQVLLL 275
Query: 247 SIDELACEPQITPSTF----YL-EIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
+ C I +F ++ E Q G+ + + C S A +++ G P
Sbjct: 276 QDSFMNCSDSIINGSFRALGFIHEAQVGERLMVHCD-SKTGNANTDFIWVG-PDNRLLEP 333
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENV 361
E Y G+ L+I + +D G + C+A N+ N T+ + + N
Sbjct: 334 DKEMENFYVFHNGS------LVIESPRFEDAGVYSCIAMNK--QRLLNETVDVTINVSNF 385
Query: 362 EV 363
V
Sbjct: 386 TV 387
>MGI|MGI:2444651 [details] [associations]
symbol:Lingo4 "leucine rich repeat and Ig domain containing
4" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS51450 MGI:MGI:2444651 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
HOVERGEN:HBG057546 CTD:339398 eggNOG:NOG306417 OrthoDB:EOG49KFQ7
EMBL:BC117866 EMBL:BC117867 EMBL:AK042286 IPI:IPI00273210
RefSeq:NP_796224.1 UniGene:Mm.213001 ProteinModelPortal:Q149C3
SMR:Q149C3 PhosphoSite:Q149C3 PRIDE:Q149C3
Ensembl:ENSMUST00000050975 GeneID:320747 KEGG:mmu:320747
UCSC:uc008qgb.1 InParanoid:Q149C3 NextBio:397357 Bgee:Q149C3
CleanEx:MM_LINGO4 Genevestigator:Q149C3 Uniprot:Q149C3
Length = 593
Score = 209 (78.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 74/256 (28%), Positives = 119/256 (46%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+FL+ +S+CPT C C + + V C ++ L T+ G+ +T++LD +GN L L
Sbjct: 18 LFLLLLPGGSISSCPTVCDCTSQ--TRAVFCAHRRLDTIPGGLPLDTELLDLSGNRLWGL 75
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
++G LQ++ LS ++S ++ AF GL +L+ L N L+ V F +
Sbjct: 76 QRGMLSRLG--QLQELDLSYNQLSTLEPGAFHGLQSLLTLRLQGNRLRIVGPGIFSGLTA 133
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L L N I GAF L L LE+ + + AF GL L + L+ ++
Sbjct: 134 LTLLDLRLNQIVLFLDGAFSELGSLQQLEVGDNHLVFVAPGAFAGLAKLSTITLERCNLS 193
Query: 185 TISGSNI--LPT----GLHGIDLHHNPWTCDCLL-IGLRRWLESTKTPM--AIDPICSVP 235
T+ G + LP L +D+ P L +G + LE P A+DP V
Sbjct: 194 TVPGLALAQLPALVALRLRELDIERLP--AGALRGLGQLKELEIHHWPSLEALDPGSLVG 251
Query: 236 PRLSSVTIKQLSIDEL 251
LSS+ I + ++ +
Sbjct: 252 LNLSSLAITRCNLSSV 267
Score = 181 (68.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 76/297 (25%), Positives = 122/297 (41%)
Query: 73 GLVNLQKIYLSRC-RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
GL L+++ + + +D + GL NL L + L +VP L L LS
Sbjct: 226 GLGQLKELEIHHWPSLEALDPGSLVGL-NLSSLAITRCNLSSVPFQALHHLSFLRILDLS 284
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
NPI I PL L L LS + I AF GL + L + +N + T+ +
Sbjct: 285 QNPISAIPARRLSPLVRLQELRLSGACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAF 344
Query: 192 -LPTGLHGIDLHHNPWTCDCLLIGL---RRWLESTKTPMAIDPICSVPPRLSSVTIKQLS 247
P L + L NP TCDC L+ L RR L+ +P P C+ P + ++++ S
Sbjct: 345 PSPDKLVTLRLSGNPLTCDCRLLWLLRLRRRLDFGTSP----PACAGPQHVQGKSLREFS 400
Query: 248 I----DELACEPQITPSTF--YLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
C+P + + ++ +EG + C P ++W+ + +
Sbjct: 401 DILPPGHFTCKPALIRKSGPRWVIAEEGGHAVFSCSGDGDPAPTVSWM------RPQGAW 454
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
V E+GT L I + + D G +VCV N AG+ S + ++ E
Sbjct: 455 LGRVGRVRVLEDGT------LEIRSVQLRDRGAYVCVVSNVAGNDSLRTWLEVIQVE 505
Score = 134 (52.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 34/113 (30%), Positives = 57/113 (50%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL NL + ++RC +S + +A L+ L LD S N + +P+ L +L LS
Sbjct: 250 VGL-NLSSLAITRCNLSSVPFQALHHLSFLRILDLSQNPISAIPARRLSPLVRLQELRLS 308
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
G + I AF L+ L+++ ++ +E+ AF D L L+L N +T
Sbjct: 309 GACLTSIAAHAFHGLTAFHLLDVADNALQTLEETAFPSPDKLVTLRLSGNPLT 361
>UNIPROTKB|Q7Z2Q7 [details] [associations]
symbol:LRRC70 "Leucine-rich repeat-containing protein 70"
species:9606 "Homo sapiens" [GO:0016021 "integral to membrane"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0016021 eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
EMBL:CH471137 HSSP:P24014 UniGene:Hs.482269 EMBL:AY280614
EMBL:AY358733 EMBL:AK123022 IPI:IPI00884949 RefSeq:NP_852607.3
UniGene:Hs.721348 ProteinModelPortal:Q7Z2Q7 SMR:Q7Z2Q7
STRING:Q7Z2Q7 PhosphoSite:Q7Z2Q7 DMDM:74759111 PRIDE:Q7Z2Q7
Ensembl:ENST00000334994 GeneID:100130733 KEGG:hsa:100130733
UCSC:uc011cqs.1 CTD:100130733 GeneCards:GC05P061912 HGNC:HGNC:35155
HPA:HPA013409 neXtProt:NX_Q7Z2Q7 PharmGKB:PA164722127
HOGENOM:HOG000113389 OMA:IYLKLDR OrthoDB:EOG42FSH5
GenomeRNAi:100130733 NextBio:20789232 ArrayExpress:Q7Z2Q7
Bgee:Q7Z2Q7 Genevestigator:Q7Z2Q7 Uniprot:Q7Z2Q7
Length = 622
Score = 216 (81.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 71/247 (28%), Positives = 120/247 (48%)
Query: 56 YTG-NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
Y G NNL + + F+ L +L+++ LS I I AF+GL NL L ++ ++ V
Sbjct: 210 YLGSNNLTKVPSNAFEV--LKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNV 267
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD-SL 173
D F +L L LS N ++ + + F L L+ L+L + I I++ F + SL
Sbjct: 268 TRDGFSGINNLKHLILSHNDLENLNSDTFSLLKNLIYLKLDRNRIISIDNDTFENMGASL 327
Query: 174 EWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPIC 232
+ L L N +T + + P + L + + NPW C+C L+GLR WL S+ + I C
Sbjct: 328 KILNLSFNNLTALHPRVLKPLSSLIHLQANSNPWECNCKLLGLRDWLASSAITLNI--YC 385
Query: 233 SVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEA--KITWLF 290
PP + ++ ++I I S + + K+ + K +A+ A K+T
Sbjct: 386 QNPPSMRGRALRYINITNCVTS-SINVSRAWAVV---KSPHIHHKTTALMMAWHKVTT-- 439
Query: 291 DGVPIQN 297
+G P++N
Sbjct: 440 NGSPLEN 446
Score = 177 (67.4 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 54/184 (29%), Positives = 87/184 (47%)
Query: 6 FLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLH 65
+L+ + K + C S +C+ G+Q + C N L ++ + +T L TGNN+ +
Sbjct: 20 YLLLLLHKEILGC--SSVCQLCTGRQ-INCRNLGLSSIPKNFPESTVFLYLTGNNISYI- 75
Query: 66 NEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSL 125
NE + GL +L +YL I + KAF L +L L ++N ++ + F +L
Sbjct: 76 NES-ELTGLHSLVALYLDNSNILYVYPKAFVQLRHLYFLFLNNNFIKRLDPGIFKGLLNL 134
Query: 126 MKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT 185
L L N + + G F L + L L + + V+ FVG+ +L L L NN I
Sbjct: 135 RNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILR 194
Query: 186 ISGS 189
IS S
Sbjct: 195 ISES 198
Score = 157 (60.3 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 46/131 (35%), Positives = 69/131 (52%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
LV++Q + L R R++V+ S F G+ L LD S+N + + F +L L L N
Sbjct: 155 LVSVQYLNLQRNRLTVLGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSN 214
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ ++ + AF+ L L L LS IE I+ AF GL +LE+L L N++I N+
Sbjct: 215 NLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIR-----NVTR 269
Query: 194 TGLHGID-LHH 203
G GI+ L H
Sbjct: 270 DGFSGINNLKH 280
Score = 149 (57.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 41/135 (30%), Positives = 66/135 (48%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
++LD + NN+ + FQ L NL +YL ++ + S AF L +L L SHN +
Sbjct: 183 RILDLSNNNILRISESGFQH--LENLACLYLGSNNLTKVPSNAFEVLKSLRRLSLSHNPI 240
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+ + F +L L L + I+ + F ++ L L LS +E + F L
Sbjct: 241 EAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSGINNLKHLILSHNDLENLNSDTFSLLK 300
Query: 172 SLEWLKLDNNKITTI 186
+L +LKLD N+I +I
Sbjct: 301 NLIYLKLDRNRIISI 315
Score = 149 (57.5 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 46/138 (33%), Positives = 70/138 (50%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
+ Q L+ N L L + F +G+V L+ + LS I I F+ L NL L N
Sbjct: 157 SVQYLNLQRNRLTVLGSGTF--VGMVALRILDLSNNNILRISESGFQHLENLACLYLGSN 214
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L VPS+ F SL +L+LS NPI+ I+ AF+ L+ L L L I + F G
Sbjct: 215 NLTKVPSNAFEVLKSLRRLSLSHNPIEAIQPFAFKGLANLEYLLLKNSRIRNVTRDGFSG 274
Query: 170 LDSLEWLKLDNNKITTIS 187
+++L+ L L +N + ++
Sbjct: 275 INNLKHLILSHNDLENLN 292
Score = 145 (56.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 53/190 (27%), Positives = 93/190 (48%)
Query: 19 PTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGN-NLKTLHNEKFQKMGLVNL 77
P S + + G + +N+S +T G+ ++ V Y N N+ ++ + F + L +L
Sbjct: 59 PESTVFLYLTGNN-ISYINESELT---GL--HSLVALYLDNSNILYVYPKAFVQ--LRHL 110
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
++L+ I +D F+GL NL +L +N + VP F D S+ L L N +
Sbjct: 111 YFLFLNNNFIKRLDPGIFKGLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTV 170
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS--NILPTG 195
+ +G F + L L+LS I I ++ F L++L L L +N +T + + +L +
Sbjct: 171 LGSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKS- 229
Query: 196 LHGIDLHHNP 205
L + L HNP
Sbjct: 230 LRRLSLSHNP 239
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/132 (32%), Positives = 61/132 (46%)
Query: 56 YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
+ NN +K L F+ GL+NL+ +YL ++S + F L ++ L+ N L +
Sbjct: 114 FLNNNFIKRLDPGIFK--GLLNLRNLYLQYNQVSFVPRGVFNDLVSVQYLNLQRNRLTVL 171
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE 174
S TF +L L LS N I +I FQ L L L L + + AF L SL
Sbjct: 172 GSGTFVGMVALRILDLSNNNILRISESGFQHLENLACLYLGSNNLTKVPSNAFEVLKSLR 231
Query: 175 WLKLDNNKITTI 186
L L +N I I
Sbjct: 232 RLSLSHNPIEAI 243
Score = 40 (19.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 8/19 (42%), Positives = 13/19 (68%)
Query: 481 SISYQIEQNPDLVNDAESV 499
S++ +E+N L NDA S+
Sbjct: 491 SVTLNLEKNSALPNDAASM 509
>MGI|MGI:2385320 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=ISO] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 MGI:MGI:2385320
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OMA:RRINEYF
OrthoDB:EOG42JNR2 EMBL:AK044631 EMBL:BC032270 IPI:IPI00279273
RefSeq:NP_666357.2 UniGene:Mm.37907 ProteinModelPortal:Q8K099
SMR:Q8K099 PhosphoSite:Q8K099 PRIDE:Q8K099
Ensembl:ENSMUST00000120052 GeneID:239037 KEGG:mmu:239037
UCSC:uc007tbr.2 InParanoid:Q8K099 NextBio:383963 Bgee:Q8K099
Genevestigator:Q8K099 GermOnline:ENSMUSG00000041044 Uniprot:Q8K099
Length = 624
Score = 209 (78.6 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 85/358 (23%), Positives = 150/358 (41%)
Query: 2 MYWIFLIATIIKIVSACPTSCICKWK----GGK-QTVECVNKSLITVVEGMDPNTQVLDY 56
M W+ + + CP+ C C + G K +TV C + L + P+T L
Sbjct: 7 MLWLLALGGPHQAWGFCPSECSCSLRILSDGSKARTVVCSDPDLTLPPASIPPDTCKLRL 66
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
++ + E F+ + L++++L +S + + RGL L +L N L T P
Sbjct: 67 ERTAIRRVPGETFRPLS--RLEQLWLPYNALSELSALMLRGLRRLRELRLPGNRLVTFPW 124
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
D P L L L N + + A L L L+LS + + + LD W
Sbjct: 125 AALRDTPQLQLLDLQANRLSTLPPEAAHFLENLTFLDLSNNQLMRLPEEL---LDV--WA 179
Query: 177 KLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRR----WLESTKTPMAIDPIC 232
L + + ++ + L NPW CDC L L W+ S + C
Sbjct: 180 HLKTGPFLSGHHARLI------LGLQDNPWVCDCRLYDLVHLLDGWVSSNLIFIEARLRC 233
Query: 233 SVPPRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-F 290
+ P L+ V QL + + C+ P++ P + G V L C + IP +++W
Sbjct: 234 ASPRSLAGVAFSQLELRK--CQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRA 291
Query: 291 DGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSS 348
+G P+ N ++ H S++ G+ +L + + + D+G ++C A+N G++ +
Sbjct: 292 NGRPL-NGTV-----HQEVSSD-GSSWTLLDLPVVS--LFDSGDYICQAKNFLGASET 340
Score = 147 (56.8 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 68/297 (22%), Positives = 124/297 (41%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
K+ L R I + + FR L+ L L +N L + + L +L L GN +
Sbjct: 63 KLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSALMLRGLRRLRELRLPGNRLVTF 122
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI-----LP 193
A + L L+L + + A L++L +L L NN++ + + L
Sbjct: 123 PWAALRDTPQLQLLDLQANRLSTLPPEAAHFLENLTFLDLSNNQLMRLPEELLDVWAHLK 182
Query: 194 TG--LHG------IDLHHNPWTCDCLLIGLRRWLES--TKTPMAIDP-ICSVPPRLSSVT 242
TG L G + L NPW CDC L L L+ + + I+ + PR S
Sbjct: 183 TGPFLSGHHARLILGLQDNPWVCDCRLYDLVHLLDGWVSSNLIFIEARLRCASPR-SLAG 241
Query: 243 IKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMS 301
+ ++ C+ P++ P + G V L C + IP +++W ++
Sbjct: 242 VAFSQLELRKCQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWR----RANGRPLN 297
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
+ V S +G+ +L + + + D+G ++C A+N G++ + I +++ E
Sbjct: 298 GTVHQEVSS--DGSSWTLLDLPVVS--LFDSGDYICQAKNFLGASET--LISLIVTE 348
>ZFIN|ZDB-GENE-060616-45 [details] [associations]
symbol:lrit1b "leucine-rich repeat,
immunoglobulin-like and transmembrane domains 1b" species:7955
"Danio rerio" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 ZFIN:ZDB-GENE-060616-45 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 HOGENOM:HOG000063714
HOVERGEN:HBG108105 EMBL:CABZ01112650 EMBL:BC117586 IPI:IPI00607359
RefSeq:NP_001036218.1 UniGene:Dr.84695 Ensembl:ENSDART00000127706
GeneID:553432 KEGG:dre:553432 CTD:553432 InParanoid:Q1ED19
NextBio:20880185 Uniprot:Q1ED19
Length = 654
Score = 209 (78.6 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 76/308 (24%), Positives = 127/308 (41%)
Query: 14 IVSACPTSCICKWK----GGK-QTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEK 68
+ +CP C C + G K ++V C + L + + + L +L + +
Sbjct: 19 LCGSCPAQCSCFYHKLSDGSKSRSVLCNDPDLTDIPDNFPLDASKLRIEKTSLSRISSAP 78
Query: 69 FQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKL 128
FQ++ +L+ +++S +S I FRGL L +L NVL + P + D PSL L
Sbjct: 79 FQQLS--SLEYLWISFNSLSSISPDTFRGLYALDELRMDGNVLTSFPWECLLDMPSLRLL 136
Query: 129 TLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISG 188
L N I I A + L L+LS + + + W G
Sbjct: 137 DLHNNKISSIPAEATLYIRNLTYLDLSSNSLTTVPPEVL-----MSWFS--PKPPLDAEG 189
Query: 189 SNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDP--ICSVPPRLSSVTIKQ 245
S ++ + LH NPW CDC L L ++ + + +A ID C+ P LS V
Sbjct: 190 SRMI------LGLHDNPWQCDCRLFDLVQFQKFPSSSVAFIDTGLRCAEPESLSGVLFSD 243
Query: 246 LSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNE-SMSA 302
+ C+ P++ + + G NV L C +P +++W DG P+
Sbjct: 244 AELRR--CQIPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSWARADGKPMNGTVQQEV 301
Query: 303 SESHAVYS 310
S+ ++S
Sbjct: 302 SKEGIIWS 309
Score = 206 (77.6 bits), Expect = 5.1e-13, P = 5.1e-13
Identities = 79/300 (26%), Positives = 134/300 (44%)
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
++ K+ + + +S I S F+ L++L L S N L ++ DTF +L +L + GN
Sbjct: 59 LDASKLRIEKTSLSRISSAPFQQLSSLEYLWISFNSLSSISPDTFRGLYALDELRMDGNV 118
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL-- 192
+ + L L+L I I A + + +L +L L +N +TT+ ++
Sbjct: 119 LTSFPWECLLDMPSLRLLDLHNNKISSIPAEATLYIRNLTYLDLSSNSLTTVPPEVLMSW 178
Query: 193 -----PTGLHG----IDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDP--ICSVPPRLSS 240
P G + LH NPW CDC L L ++ + + +A ID C+ P LS
Sbjct: 179 FSPKPPLDAEGSRMILGLHDNPWQCDCRLFDLVQFQKFPSSSVAFIDTGLRCAEPESLSG 238
Query: 241 VTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNE 298
V + C+ P++ + + G NV L C +P +++W DG P
Sbjct: 239 VLFSDAELRR--CQIPRVHTAVARVRSSIGNNVLLRCGTIGVPIPELSWARADGKP---- 292
Query: 299 SMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
M+ + V ++EG I S L + + D+G +VC A N GS + I +V+ +
Sbjct: 293 -MNGTVQQEV--SKEG--IIWSILSVPAVSYRDSGKYVCKATNFVGSADA--IISLVISD 345
>UNIPROTKB|F1MMM6 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070100 "negative regulation of chemokine-mediated
signaling pathway" evidence=IEA] [GO:0061364 "apoptotic process
involved in luteolysis" evidence=IEA] [GO:0051414 "response to
cortisol stimulus" evidence=IEA] [GO:0050919 "negative chemotaxis"
evidence=IEA] [GO:0048846 "axon extension involved in axon
guidance" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0035385 "Roundabout signaling pathway"
evidence=IEA] [GO:0032870 "cellular response to hormone stimulus"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
[GO:0005509 "calcium ion binding" evidence=IEA] InterPro:IPR001611
InterPro:IPR000742 InterPro:IPR001881 InterPro:IPR018097
Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026 PROSITE:PS51450
SMART:SM00179 SMART:SM00181 InterPro:IPR000152 GO:GO:0008285
GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0005509 InterPro:IPR013032
PROSITE:PS00022 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887 PROSITE:PS01186
GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791 SMART:SM00282
PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185 PROSITE:PS01225
SMART:SM00041 Pfam:PF02210 GO:GO:0048846 GO:GO:0070100 Pfam:PF12661
GO:GO:0051414 GeneTree:ENSGT00700000104083 GO:GO:0050919
GO:GO:0035385 GO:GO:0061364 OMA:SVDCHGL EMBL:DAAA02049822
EMBL:DAAA02049823 EMBL:DAAA02049824 EMBL:DAAA02049825
EMBL:DAAA02049826 EMBL:DAAA02049827 IPI:IPI01017433
Ensembl:ENSBTAT00000049620 Uniprot:F1MMM6
Length = 1339
Score = 213 (80.0 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 55/170 (32%), Positives = 91/170 (53%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
ISV+++ F+ L NL ++ S+N ++ V F S+ +L L+GN ++ AF+
Sbjct: 358 ISVLEATGIFKKLPNLRKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRG 417
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTI+ G+ L I+L N
Sbjct: 418 LSGLKTLMLRSNLISCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C L L +WL + ++ +P C P L + I+ ++I + C+
Sbjct: 478 PFNCNCHLAWLGKWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCD 526
Score = 184 (69.8 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 56/176 (31%), Positives = 77/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I +I
Sbjct: 125 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEI 184
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L SL L L +NK+ TIS P +
Sbjct: 185 PKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQ 244
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 245 TLHLAQNPFVCDCHLRWLADYLQDNPIETS-GARCSSPRRLANKRISQIKSKKFRC 299
Score = 151 (58.2 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 44/165 (26%), Positives = 73/165 (44%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP++C C V+C K L + + + N++K++ F +
Sbjct: 93 SCPSACTCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYK--K 146
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + +P F SL L L+ N I
Sbjct: 147 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEIPKGLFDGLVSLQLLLLNANKIN 206
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L +++ L L N
Sbjct: 207 CLRVNTFQDLQSLSLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 251
Score = 137 (53.3 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 41/139 (29%), Positives = 66/139 (47%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNE--KFQKMGLV 75
CP C C + V C N+ L + +G+ + L GN+L + E F+ + L+
Sbjct: 539 CPEQCTCV----ETVVRCSNRGLRALPKGIPKDVTELYLEGNHLTAVPKELSSFRHLTLI 594
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L S I ++ + F +++L L S+N L+ +P +F SL LTL GN I
Sbjct: 595 DL-----SNNSIGMLTNYTFSNMSHLSTLILSYNRLRCIPVHSFNGLRSLRVLTLHGNDI 649
Query: 136 KQIKTGAFQPLSYLVTLEL 154
+ G+F L+ L L L
Sbjct: 650 SSVPEGSFNDLTSLSHLLL 668
Score = 134 (52.2 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 49/164 (29%), Positives = 66/164 (40%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L + + L N + L K L NL
Sbjct: 319 CPDRCRCE--G--TIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKK-LPNL 373
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS RI + AF G ++ +L + N L+T F L L L N I
Sbjct: 374 RKINLSNNRIKEVKEGAFDGAASVQELVLTGNQLETAHGRAFRGLSGLKTLMLRSNLISC 433
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 434 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 477
>RGD|1311831 [details] [associations]
symbol:Lrfn2 "leucine rich repeat and fibronectin type III
domain containing 2" species:10116 "Rattus norvegicus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR003961
InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853
PROSITE:PS51450 SMART:SM00060 RGD:1311831 GO:GO:0016021
GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0030054
GO:GO:0045211 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
MEROPS:I43.001 HOGENOM:HOG000237343 HOVERGEN:HBG052352
eggNOG:NOG311542 OrthoDB:EOG469QT6 EMBL:DQ070869 IPI:IPI00371727
UniGene:Rn.47365 ProteinModelPortal:Q460M5 IntAct:Q460M5
STRING:Q460M5 UCSC:RGD:1311831 InParanoid:Q460M5
Genevestigator:Q460M5 Uniprot:Q460M5
Length = 788
Score = 210 (79.0 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 87/319 (27%), Positives = 136/319 (42%)
Query: 51 TQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV 110
T ++D T + H + F + L +L+ ++L R+ + RGL NL L ++N
Sbjct: 76 TGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNNNQ 135
Query: 111 LQTVPSDTFPDYP-SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L + D F D+ +L L LS N + + + + + L L L ++ I + F
Sbjct: 136 LGGIADDAFEDFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIAEGTFAD 195
Query: 170 LDSLEWLKLDNNKITTI--------SGSNILPTGLHGIDLHH----NPWTCDCLLIGLRR 217
L L L L +N++ + S +++L L NP C+C L+ LRR
Sbjct: 196 LQKLARLDLTSNRLQKLPPDPIFARSQASLLTATPFAPPLSFSFGGNPLHCNCELLWLRR 255
Query: 218 WLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQ-ITPSTFYLEIQEGKNVSLLC 276
LE C P L + +E CEP IT T L + EG+ +L C
Sbjct: 256 -LERDDDLKT----CGSPGGLKGRYFWHIREEEFVCEPPLITQHTHKLLVLEGQAATLKC 310
Query: 277 KVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFV 336
K P I W+ P + + S AVY + GT ++LI S D+G F
Sbjct: 311 KAIGDPSPLIHWV---AP-DDRLVGNSSRTAVY--DNGT----LDILITTSQ--DSGPFT 358
Query: 337 CVAENQAGSTSSNYTIRIV 355
C+A N AG ++ + IV
Sbjct: 359 CIAANAAGEATATVEVSIV 377
Score = 142 (55.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 14 IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKM- 72
+V ACP C+C+ C +K L+ V +D T L GN + + + F M
Sbjct: 17 VVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHIGRQDFANMT 76
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GLV+L LSR IS I +F L +L L N L ++ DT +L L ++
Sbjct: 77 GLVDLT---LSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNN 133
Query: 133 NPIKQIKTGAFQPLSYLVTLE---LSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
N + I AF+ +L+TLE LS + + + + +L L LD+N + I+
Sbjct: 134 NQLGGIADDAFE--DFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIA 189
>UNIPROTKB|G3N218 [details] [associations]
symbol:G3N218 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007601 "visual perception" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] GO:GO:0007601 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 OMA:NISFITP
GeneTree:ENSGT00690000101803 EMBL:DAAA02073610
Ensembl:ENSBTAT00000066321 Uniprot:G3N218
Length = 478
Score = 206 (77.6 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 54/177 (30%), Positives = 86/177 (48%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+GL L+ + L R+ + AFR + L L + N+L +P+D F L L L
Sbjct: 199 LGLRRLRSLSLQGNRVRAVHGGAFRDCSALEHLLLNDNLLAALPADAFLGLRRLRTLNLG 258
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
GN + ++ F L+ L L L + I +E+ AF L L L L+ N +T ++ +
Sbjct: 259 GNALGRVVRAWFAELAELELLYLDRNRIAFVEEGAFQNLSGLLALHLNGNHLTVLAWAAF 318
Query: 192 LPTGLHG-IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLS 247
P G + L NPW CDC L LR W+ES D C+ P ++ + ++Q++
Sbjct: 319 QPGFFLGRLFLFRNPWRCDCRLEWLRDWMESFGR--TADVPCASPGSVAGLDLRQVA 373
Score = 133 (51.9 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 44/136 (32%), Positives = 61/136 (44%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL NL +L R RI + S + GL L L N ++ V F D +L L L+
Sbjct: 176 GLANLTHAHLERSRIEAVASSSLLGLRRLRSLSLQGNRVRAVHGGAFRDCSALEHLLLND 235
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNI 191
N + + AF L L TL L + + A F L LE L LD N+I + G+
Sbjct: 236 NLLAALPADAFLGLRRLRTLNLGGNALGRVVRAWFAELAELELLYLDRNRIAFVEEGAFQ 295
Query: 192 LPTGLHGIDLHHNPWT 207
+GL + L+ N T
Sbjct: 296 NLSGLLALHLNGNHLT 311
Score = 124 (48.7 bits), Expect = 0.00026, P = 0.00026
Identities = 45/179 (25%), Positives = 77/179 (43%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
V+ACP +C+C + +V C L+ V +D N L+ L F L
Sbjct: 24 VNACPAACVCSSVERRCSVRCDRAGLLRVPAEFPCEAASIDLDRNGLRFLGERAFGT--L 81
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV-LQTVPSDTFPDYPSLMKLTLSGN 133
+L+++ L +S I AF+GL L +L +HN L+ + + TF L +L L+
Sbjct: 82 PSLRRLSLRHNNLSFITPGAFKGLPRLAELSLAHNGDLRYLHARTFTALGRLRRLDLTVC 141
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
+ + L L L + A GL +L L+ ++I ++ S++L
Sbjct: 142 RLFSVPERLLAELPALRELAAFDNLFRRVP-GALRGLANLTHAHLERSRIEAVASSSLL 199
>RGD|1310506 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10116 "Rattus norvegicus" [GO:0007409 "axonogenesis"
evidence=IEA;ISO] RGD:1310506 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 EMBL:CH473976 GeneTree:ENSGT00680000099775 CTD:22865
OMA:IAPYQTR OrthoDB:EOG473PQR IPI:IPI00202395 RefSeq:NP_001101153.1
UniGene:Rn.68333 Ensembl:ENSRNOT00000013009 GeneID:310519
KEGG:rno:310519 UCSC:RGD:1310506 NextBio:662093 Uniprot:D4A062
Length = 979
Score = 211 (79.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLHNEKFQKMG 73
CPT C C TV C + + E + P N + L + N ++ ++ F
Sbjct: 373 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 432
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
++L ++L RIS + AF L NL L + N ++ + F SL L N
Sbjct: 433 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 490
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I++I+ AF + L L L+ + + AF G SL L L N + + +L
Sbjct: 491 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 549
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDE 250
+ IDL+ NPW C C L+ ++W+E+ + + D +C P L+ ++ + ++
Sbjct: 550 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLTHRDVRTIELEV 609
Query: 251 LACE 254
L E
Sbjct: 610 LCPE 613
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 73/260 (28%), Positives = 110/260 (42%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMD--PNTQVLDYTGNNLKTL 64
LI +I C C C+ K + C +K + + + L N+++ L
Sbjct: 33 LIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKL 92
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F + L N I L + I + AF GL L L N L +DTF S
Sbjct: 93 YTNSF--LHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLES 150
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L N IK+I++GAF+ LS L L L+ I V+ F + SL L L N++
Sbjct: 151 LEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAV-SLTHLDLRGNRLK 209
Query: 185 TISGSNILP---TGLHGIDLHHNPWTCDCLLIGLRRWLESTK-TPMAIDPICSVPPRLSS 240
+ +L L + L NPW C C ++ L+ WLE T + D C P
Sbjct: 210 VLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHG 269
Query: 241 VTIKQLSIDELACEPQITPS 260
++++ EL C P ++ S
Sbjct: 270 KDLREIKKTEL-C-PLLSDS 287
>MGI|MGI:2679447 [details] [associations]
symbol:Slitrk3 "SLIT and NTRK-like family, member 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISS] MGI:MGI:2679447 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH466547 HOGENOM:HOG000290667
HOVERGEN:HBG056407 GeneTree:ENSGT00680000099775 CTD:22865
eggNOG:NOG292495 OMA:IAPYQTR OrthoDB:EOG473PQR EMBL:AB097572
EMBL:AK158856 EMBL:BC066059 IPI:IPI00329845 RefSeq:NP_942564.2
UniGene:Mm.331076 ProteinModelPortal:Q810B9 SMR:Q810B9
PhosphoSite:Q810B9 PaxDb:Q810B9 PRIDE:Q810B9
Ensembl:ENSMUST00000059407 GeneID:386750 KEGG:mmu:386750
InParanoid:Q6NZM5 NextBio:405558 Bgee:Q810B9 CleanEx:MM_SLITRK3
Genevestigator:Q810B9 GermOnline:ENSMUSG00000048304 Uniprot:Q810B9
Length = 980
Score = 211 (79.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLHNEKFQKMG 73
CPT C C TV C + + E + P N + L + N ++ ++ F
Sbjct: 374 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 433
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
++L ++L RIS + AF L NL L + N ++ + F SL L N
Sbjct: 434 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 491
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I++I+ AF + L L L+ + + AF G SL L L N + + +L
Sbjct: 492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 550
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDE 250
+ IDL+ NPW C C L+ ++W+E+ + + D +C P L+ ++ + ++
Sbjct: 551 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRTPENLTHRDVRTIELEV 610
Query: 251 LACE 254
L E
Sbjct: 611 LCPE 614
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 73/260 (28%), Positives = 110/260 (42%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMD--PNTQVLDYTGNNLKTL 64
LI +I C C C+ K + C +K + + + L N+++ L
Sbjct: 34 LIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRRL 93
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F + L N I L + I + AF GL L L N L +DTF S
Sbjct: 94 YTNSF--LHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLES 151
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L N IK+I++GAF+ LS L L L+ I V+ F + SL L L N++
Sbjct: 152 LEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPVLPTNLFKAV-SLTHLDLRGNRLK 210
Query: 185 TISGSNILP---TGLHGIDLHHNPWTCDCLLIGLRRWLESTK-TPMAIDPICSVPPRLSS 240
+ +L L + L NPW C C ++ L+ WLE T + D C P
Sbjct: 211 VLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHG 270
Query: 241 VTIKQLSIDELACEPQITPS 260
++++ EL C P ++ S
Sbjct: 271 KDLREIKKTEL-C-PLLSDS 288
>UNIPROTKB|F1LRE2 [details] [associations]
symbol:Igfals "Insulin-like growth factor-binding protein
complex acid labile subunit" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
RGD:68429 GO:GO:0005634 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 IPI:IPI00202416
OMA:FCGLGEL Ensembl:ENSRNOT00000020233 ArrayExpress:F1LRE2
Uniprot:F1LRE2
Length = 602
Score = 207 (77.9 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 18 CPTSCICKWKG--GKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
CP +C C + +V C +K+L + + + +T+ L GNNL ++ + FQ +
Sbjct: 40 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLS-- 97
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L + L + ++ +A GL NL L N L+ + F PSL L+LS N +
Sbjct: 98 SLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSNLL 157
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+++ G FQ LS+L L L + V+ D F GL +L L L NK+T + + G
Sbjct: 158 GRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLG 217
Query: 196 -LHGIDLHHN 204
L +DL N
Sbjct: 218 ELRELDLSRN 227
Score = 179 (68.1 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 50/162 (30%), Positives = 77/162 (47%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L++++L IS I+ ++ GL+ L++LD + N L +P F L L LS
Sbjct: 407 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 466
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + + PL L++S +E + + F L L +L L NN + T S
Sbjct: 467 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQ--- 523
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRW-LESTKT-PMAIDPIC 232
P GL + L NPW C C L LR + L++ P + +C
Sbjct: 524 P-GLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQTVC 564
Score = 177 (67.4 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 47/133 (35%), Positives = 71/133 (53%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L+++ F + L LQK+YL R I+ + +AF G+ L LD SHN +
Sbjct: 222 LDLSRNALRSVKANVF--VHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAG 279
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ DTFP L L L+ N I ++ F+ L +L L+L I + + F GL L
Sbjct: 280 LMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQL 339
Query: 174 EWLKLDNNKITTI 186
E L L++N+IT +
Sbjct: 340 EVLTLNDNQITEV 352
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 48/158 (30%), Positives = 73/158 (46%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ L + N L L FQ GL +L + L + V+ F+GL NL +L +
Sbjct: 145 PSLASLSLSSNLLGRLEEGLFQ--GLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAG 202
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L + F L +L LS N ++ +K F L L L L + I + AF+
Sbjct: 203 NKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFL 262
Query: 169 GLDSLEWLKLDNNKITTISGSNILP--TGLHGIDLHHN 204
G+ +L WL L +N++ + + P GLH + L HN
Sbjct: 263 GMKALRWLDLSHNRVAGLM-EDTFPGLLGLHVLRLAHN 299
Score = 146 (56.5 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+L L + FQ GL NL ++ L+ +++ + F GL L +LD S N L++V ++
Sbjct: 179 NSLVVLPDTVFQ--GLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 236
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F P L KL L N I + AF + L L+LS + + + F GL L L+L
Sbjct: 237 FVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRL 296
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHN 204
+N I ++ L + L HN
Sbjct: 297 AHNAIASLRPRTFKDLHFLEELQLGHN 323
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 47/161 (29%), Positives = 73/161 (45%)
Query: 45 EGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDL 104
EG+ +VL N + + F GL N+ + LS + + + F+GL L L
Sbjct: 334 EGLG-QLEVLTLNDNQITEVRVGAFS--GLFNVAVMNLSGNCLRSLPERVFQGLDKLHSL 390
Query: 105 DFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIED 164
H+ L V TF L +L L N I I+ + LS L+ L+L+ + +
Sbjct: 391 HLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPR 450
Query: 165 AAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
F GL LE+L L N++TT+S + P +D+ HN
Sbjct: 451 QLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHN 491
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/151 (28%), Positives = 74/151 (49%)
Query: 36 VNKSLITVVE-----GMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVI 90
++++LIT V GM + LD + N + L + F GL+ L + L+ I+ +
Sbjct: 248 LDRNLITAVAPRAFLGMKA-LRWLDLSHNRVAGLMEDTFP--GLLGLHVLRLAHNAIASL 304
Query: 91 DSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLV 150
+ F+ L L +L HN ++ + TF L LTL+ N I +++ GAF L +
Sbjct: 305 RPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVA 364
Query: 151 TLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ LS + + + F GLD L L L+++
Sbjct: 365 VMNLSGNCLRSLPERVFQGLDKLHSLHLEHS 395
Score = 126 (49.4 bits), Expect = 0.00022, P = 0.00022
Identities = 43/174 (24%), Positives = 74/174 (42%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N V++ +GN L++L FQ GL L ++L + + F GL+ L L N
Sbjct: 362 NVAVMNLSGNCLRSLPERVFQ--GLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 419
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
+ ++ + L++L L+ N + + FQ L +L L LS + +
Sbjct: 420 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGP 479
Query: 170 LDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRR-WLES 221
L WL + +N + T++ G L + L +N GL R WL++
Sbjct: 480 LQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSPQPGLERLWLDA 533
Score = 120 (47.3 bits), Expect = 0.00099, P = 0.00099
Identities = 44/157 (28%), Positives = 70/157 (44%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P Q L Y NL T + +G+ L+ + LS R++ + F GL L L +H
Sbjct: 241 PRLQKL-YLDRNLITAVAPR-AFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRLAH 298
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + ++ TF D L +L L N I+Q+ F+ L L L L+ I + AF
Sbjct: 299 NAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFS 358
Query: 169 GLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
GL ++ + L N + ++ LH + L H+
Sbjct: 359 GLFNVAVMNLSGNCLRSLPERVFQGLDKLHSLHLEHS 395
>RGD|1561300 [details] [associations]
symbol:Nyx "nyctalopin" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0007601 "visual perception" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] RGD:1561300
GO:GO:0007601 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 GO:GO:0005622 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:60506 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 KO:K08129 OrthoDB:EOG43JC4W
GeneTree:ENSGT00690000101803 EMBL:CH474009 EMBL:DQ393414
IPI:IPI00858403 RefSeq:NP_001094437.1 UniGene:Rn.153545
Ensembl:ENSRNOT00000013382 GeneID:302516 KEGG:rno:302516
UCSC:RGD:1561300 InParanoid:A1XIQ3 NextBio:649772
Genevestigator:A1XIQ3 Uniprot:A1XIQ3
Length = 476
Score = 205 (77.2 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 57/197 (28%), Positives = 93/197 (47%)
Query: 72 MGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
+G+ L+ + L R+ + + AF L L + N+L ++P+ F L L L
Sbjct: 198 LGMRRLRSLSLQANRVRAVHAGAFGDCVALEHLLLNDNLLASLPAAAFRGLRRLRTLNLG 257
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNI 191
GN + + G F L+ L L L + I +E+ AF L L L L+ N++T +S +
Sbjct: 258 GNALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQNLSGLLALHLNGNRLTVLSWAAF 317
Query: 192 LPTGLHG-IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL---- 246
P G + L NPW CDC L LR W+E + D C+ P ++ + Q+
Sbjct: 318 QPGFFLGRLFLFRNPWRCDCHLEWLRDWMEGSGR--VADVACASPGSVAGQDLSQVVFER 375
Query: 247 SIDELACEP-QITPSTF 262
S D + +P ++ +TF
Sbjct: 376 SSDGICVDPDELNFTTF 392
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 42/136 (30%), Positives = 61/136 (44%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL NL + R RI + S + G+ L L N ++ V + F D +L L L+
Sbjct: 175 GLANLTHAHFERSRIEAVASSSLLGMRRLRSLSLQANRVRAVHAGAFGDCVALEHLLLND 234
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNI 191
N + + AF+ L L TL L + + F L LE L LD N IT + G+
Sbjct: 235 NLLASLPAAAFRGLRRLRTLNLGGNALGSVARGWFSDLAELELLYLDRNSITFVEEGAFQ 294
Query: 192 LPTGLHGIDLHHNPWT 207
+GL + L+ N T
Sbjct: 295 NLSGLLALHLNGNRLT 310
>UNIPROTKB|F1SH46 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007409 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00680000099775 OMA:IAPYQTR
EMBL:CU466936 Ensembl:ENSSSCT00000012847 Uniprot:F1SH46
Length = 979
Score = 210 (79.0 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLHNEKFQKMG 73
CPT C C TV C + + E + P N + L + N ++ ++ F
Sbjct: 374 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 433
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
++L ++L RIS + AF L NL L + N ++ + F SL L N
Sbjct: 434 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 491
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I++I+ AF + L L L+ + + AF G SL L L N + + +L
Sbjct: 492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 550
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDE 250
+ IDL+ NPW C C L+ ++W+E+ + + D +C P L+ ++ + ++
Sbjct: 551 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTIELEV 610
Query: 251 LACEP-QITPS 260
L E I P+
Sbjct: 611 LCPEMLHIAPA 621
Score = 188 (71.2 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 71/260 (27%), Positives = 110/260 (42%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMD--PNTQVLDYTGNNLKTL 64
LI +I C C C+ K + C +K + + + L N+++ L
Sbjct: 34 LIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKL 93
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F + L N I L + I + AF GL L L N L ++TF S
Sbjct: 94 YTNSF--LHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNETFLGLES 151
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L N IK+I++GAF+ LS L L L+ I ++ F + SL L L N++
Sbjct: 152 LEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SLTHLDLRGNRLK 210
Query: 185 TISGSNILP---TGLHGIDLHHNPWTCDCLLIGLRRWLESTK-TPMAIDPICSVPPRLSS 240
+ +L L + L NPW C C ++ L+ WLE T + D C P
Sbjct: 211 VLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHG 270
Query: 241 VTIKQLSIDELACEPQITPS 260
++++ EL C P ++ S
Sbjct: 271 KDLREIRKTEL-C-PLLSDS 288
>UNIPROTKB|F1N513 [details] [associations]
symbol:LOC527364 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 OMA:IAPYQTR EMBL:DAAA02002302
IPI:IPI00907843 RefSeq:XP_003585735.1 RefSeq:XP_003585736.1
Ensembl:ENSBTAT00000022827 GeneID:527364 KEGG:bta:527364
Uniprot:F1N513
Length = 980
Score = 210 (79.0 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 66/251 (26%), Positives = 111/251 (44%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLHNEKFQKMG 73
CPT C C TV C + + E + P N + L + N ++ ++ F
Sbjct: 374 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 433
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
++L ++L RIS + AF L NL L + N ++ + F SL L N
Sbjct: 434 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 491
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I++I+ AF + L L L+ + + AF G SL L L N + + +L
Sbjct: 492 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 550
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDE 250
+ IDL+ NPW C C L+ ++W+E+ + + D +C P L+ ++ + ++
Sbjct: 551 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTIELEV 610
Query: 251 LACEP-QITPS 260
L E I P+
Sbjct: 611 LCPEMLHIAPA 621
Score = 191 (72.3 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 72/260 (27%), Positives = 110/260 (42%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMD--PNTQVLDYTGNNLKTL 64
LI +I C C C+ K + C +K + + + L N+++ L
Sbjct: 34 LIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKL 93
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F + L N I L + I + AF GL L L N L +DTF S
Sbjct: 94 YTNSF--LHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDIFRNDTFLGLES 151
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L N IK+I++GAF+ LS L L L+ I ++ F + SL L L N++
Sbjct: 152 LEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SLTHLDLRGNRLK 210
Query: 185 TISGSNILP---TGLHGIDLHHNPWTCDCLLIGLRRWLESTK-TPMAIDPICSVPPRLSS 240
+ +L L + L NPW C C ++ L+ WLE T + D C P
Sbjct: 211 VLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHG 270
Query: 241 VTIKQLSIDELACEPQITPS 260
++++ EL C P ++ S
Sbjct: 271 KDLREIRKTEL-C-PLLSDS 288
>ZFIN|ZDB-GENE-030827-4 [details] [associations]
symbol:tpbga "trophoblast glycoprotein a"
species:7955 "Danio rerio" [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=IMP] [GO:2000052
"positive regulation of non-canonical Wnt receptor signaling
pathway" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-030827-4 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0090090 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 HSSP:Q9BZR6 GO:GO:2000052 CTD:100507050
HOVERGEN:HBG053843 EMBL:JN653073 EMBL:AB097825 IPI:IPI00508902
RefSeq:NP_919373.1 UniGene:Dr.25206 GeneID:373095 KEGG:dre:373095
InParanoid:Q7T2W3 NextBio:20813366 Uniprot:Q7T2W3
Length = 372
Score = 202 (76.2 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 65/197 (32%), Positives = 94/197 (47%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CPT C C TV+CV+K L + G+ T+ L TGN++ + E FQ GL N+
Sbjct: 26 CPTGCECS--EAALTVKCVSKDLRDIPSGIPGYTRNLFITGNHISQIGPESFQ--GLENV 81
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMK-LTLSG---- 132
+ LS RIS + S F L +L LD S+N L + + F +++ L LS
Sbjct: 82 TNLSLSNNRISEVKSHTFSSLRSLRSLDLSNNQLAVIHPEAFTVQSRMLRELNLSRALYN 141
Query: 133 -NPIKQIKTGA-FQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSN 190
+ + + T + LS L+ L+L G+ + F L L L+L NN I +I
Sbjct: 142 HSSVMDLATSLRWSSLSDLLVLDLXSNGLVFLPSGIFCHLVGLRRLQLGNNSIVSIHNGT 201
Query: 191 ILPTGL-H--GIDLHHN 204
TGL H +DL HN
Sbjct: 202 F--TGLDHLQELDLTHN 216
Score = 154 (59.3 bits), Expect = 8.4e-08, P = 8.4e-08
Identities = 59/221 (26%), Positives = 101/221 (45%)
Query: 45 EGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAF----RGLT- 99
+G++ N L + N + + + F L +L+ + LS +++VI +AF R L
Sbjct: 76 QGLE-NVTNLSLSNNRISEVKSHTFSS--LRSLRSLDLSNNQLAVIHPEAFTVQSRMLRE 132
Query: 100 -NLVDLDFSHN-VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKC 157
NL ++H+ V+ S + L+ L L N + + +G F L L L+L
Sbjct: 133 LNLSRALYNHSSVMDLATSLRWSSLSDLLVLDLXSNGLVFLPSGIFCHLVGLRRLQLGNN 192
Query: 158 GIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLH--HNPWTCDCLLIG 214
I I + F GLD L+ L L +N + T+ + LH LH NP+TC C +
Sbjct: 193 SIVSIHNGTFTGLDHLQELDLTHNALRTLREEALKELEQLHSARLHLADNPFTCTCDIEP 252
Query: 215 LRRWLESTKTPMA-IDPI-CSVPPRLSSVTIKQLSIDELAC 253
WL ++ + I+ + C+ P L + ++ + EL C
Sbjct: 253 FAAWLNGSRGQVVDIEGLTCAFPVALHNTSLLTVGDLELGC 293
>MGI|MGI:107935 [details] [associations]
symbol:Lrig1 "leucine-rich repeats and immunoglobulin-like
domains 1" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:107935 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GeneTree:ENSGT00690000101816 Pfam:PF01463 CTD:26018
HOGENOM:HOG000113380 HOVERGEN:HBG052353 OMA:ESNGVCP
OrthoDB:EOG48PMJN ChiTaRS:LRIG1 EMBL:D78572 EMBL:AC122272
EMBL:AC155330 IPI:IPI00136475 PIR:A58532 RefSeq:NP_032403.2
UniGene:Mm.245210 ProteinModelPortal:P70193 SMR:P70193
STRING:P70193 PhosphoSite:P70193 PaxDb:P70193 PRIDE:P70193
Ensembl:ENSMUST00000032105 Ensembl:ENSMUST00000101126 GeneID:16206
KEGG:mmu:16206 UCSC:uc009czu.1 InParanoid:P70193 NextBio:289161
Bgee:P70193 Genevestigator:P70193 GermOnline:ENSMUSG00000030029
Uniprot:P70193
Length = 1091
Score = 205 (77.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 74/286 (25%), Positives = 120/286 (41%)
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L ++ LS ++ +D ++ L++L L SHN + + F SL L L N I
Sbjct: 311 LHELILSFNNLTRLDEESLAELSSLSILRLSHNAISHIAEGAFKGLKSLRVLDLDHNEIS 370
Query: 137 ---QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ +GAF L L L L I+ + AF GL+SLE L L N I ++
Sbjct: 371 GTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAK 430
Query: 194 T-GLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
L + + + CDC L L WL + C+ P L +I + D
Sbjct: 431 MKNLKELYISSESFLCDCQLKWLPPWLMGRMLQAFVTATCAHPESLKGQSIFSVLPDSFV 490
Query: 253 CE----PQIT--PSTFYLEIQEGKNVSLLCKVSAIPEAKIT--WLFDGVPIQNESMSASE 304
C+ PQI P T + GK++ C ++ + +T W D + N M E
Sbjct: 491 CDDFPKPQIITQPETTMAVV--GKDIRFTCSAASSSSSPMTFAWKKDNEVLANADM---E 545
Query: 305 SHAVYSTEEGTEIKKSELL-IYNSNIDDNGTFVCVAENQAGSTSSN 349
+ A ++G ++ + +L + + G + C+ N GST S+
Sbjct: 546 NFAHVRAQDGEVMEYTTILHLRHVTFGHEGRYQCIITNHFGSTYSH 591
Score = 175 (66.7 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 54/188 (28%), Positives = 88/188 (46%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
C +C C G +++C + L T+ + T+ L+ + N L + + F+ L NL
Sbjct: 43 CAAACTC---AG-DSLDCSGRGLATLPRDLPSWTRSLNLSYNRLSEIDSAAFED--LTNL 96
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q++YL+ ++ I S + +V L HN + +V Y SL L LS N I +
Sbjct: 97 QEVYLNSNELTAIPSLGAASI-GVVSLFLQHNKILSVDGSQLKSYLSLEVLDLSSNNITE 155
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD-SLEWLKLDNNKITTISGSNILPTGL 196
I++ F + L L+ I ++E AF GL SL L+L N+IT + L
Sbjct: 156 IRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFKLPRL 215
Query: 197 HGIDLHHN 204
+DL+ N
Sbjct: 216 TQLDLNRN 223
Score = 152 (58.6 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 51/169 (30%), Positives = 84/169 (49%)
Query: 36 VNKSLITVVEGMD----PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N++ I ++EG+ + +VL NN+ L + F GL + ++L + ++
Sbjct: 220 LNRNRIRLIEGLTFQGLDSLEVLRLQRNNISRLTDGAF--WGLSKMHVLHLEYNSLVEVN 277
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
S + GLT L L S+N + + D + L +L LS N + ++ + LS L
Sbjct: 278 SGSLYGLTALHQLHLSNNSISRIQRDGWSFCQKLHELILSFNNLTRLDEESLAELSSLSI 337
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNILPTGLHGI 199
L LS I I + AF GL SL L LD+N+I+ TI ++ TGL +
Sbjct: 338 LRLSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDTSGAFTGLDNL 386
Score = 140 (54.3 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 46/143 (32%), Positives = 65/143 (45%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
NNL L E ++ +++ + LS IS I AF+GL +L LD HN + DT
Sbjct: 319 NNLTRLDEESLAELSSLSILR--LSHNAISHIAEGAFKGLKSLRVLDLDHNEISGTIEDT 376
Query: 119 ---FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEW 175
F +L KLTL GN IK + AF L L L L + I ++ AF + +L+
Sbjct: 377 SGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENAIRSVQFDAFAKMKNLKE 436
Query: 176 LKLDNNKITTISGSNILPTGLHG 198
L + + LP L G
Sbjct: 437 LYISSESFLCDCQLKWLPPWLMG 459
Score = 138 (53.6 bits), Expect = 3.1e-09, Sum P(3) = 3.1e-09
Identities = 41/133 (30%), Positives = 63/133 (47%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L+ N + L + F + +L + LS+ RI+ + KAF+ L L LD + N ++
Sbjct: 170 LNLASNRISILESGAFDGLSR-SLLTLRLSKNRITQLPVKAFK-LPRLTQLDLNRNRIRL 227
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ TF SL L L N I ++ GAF LS + L L + + + GL +L
Sbjct: 228 IEGLTFQGLDSLEVLRLQRNNISRLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLYGLTAL 287
Query: 174 EWLKLDNNKITTI 186
L L NN I+ I
Sbjct: 288 HQLHLSNNSISRI 300
Score = 133 (51.9 bits), Expect = 1.1e-08, Sum P(3) = 1.1e-08
Identities = 44/140 (31%), Positives = 68/140 (48%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N Q + N L + + +G+V+L +L +I +D + +L LD S N
Sbjct: 95 NLQEVYLNSNELTAIPSLGAASIGVVSL---FLQHNKILSVDGSQLKSYLSLEVLDLSSN 151
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSY-LVTLELSKCGIEVIEDAAFV 168
+ + S FP+ + +L L+ N I +++GAF LS L+TL LSK I + AF
Sbjct: 152 NITEIRSSCFPNGLRIRELNLASNRISILESGAFDGLSRSLLTLRLSKNRITQLPVKAFK 211
Query: 169 GLDSLEWLKLDNNKITTISG 188
L L L L+ N+I I G
Sbjct: 212 -LPRLTQLDLNRNRIRLIEG 230
Score = 95 (38.5 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 33/123 (26%), Positives = 51/123 (41%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
P T + I+ G L C + P +I W DG A+ ++ +
Sbjct: 601 PSFTKIPHDIAIRTGTTARLECAATGHPNPQIAWQKDG----GTDFPAARERRMHVMPDD 656
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENVEVVTVFPLEYVLI 374
I + IDD G + C A+N AGS S+N T+ VL+ ++ V PLE ++
Sbjct: 657 -----DVFFITDVKIDDMGVYSCTAQNSAGSVSANATLT-VLETPSLAV----PLEDRVV 706
Query: 375 VSG 377
G
Sbjct: 707 TVG 709
Score = 92 (37.4 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 25/81 (30%), Positives = 41/81 (50%)
Query: 52 QVLDYTGNNLK-TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV 110
+VLD N + T+ + GL NL K+ L +I + +AF GL +L L+ N
Sbjct: 360 RVLDLDHNEISGTIEDTSGAFTGLDNLSKLTLFGNKIKSVAKRAFSGLESLEHLNLGENA 419
Query: 111 LQTVPSDTFPDYPSLMKLTLS 131
+++V D F +L +L +S
Sbjct: 420 IRSVQFDAFAKMKNLKELYIS 440
Score = 91 (37.1 bits), Expect = 9.2e-13, Sum P(3) = 9.2e-13
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 269 GKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSN 328
G+ V+ CK + P +ITWL G P+ S +E H + T G ++ L++ N
Sbjct: 709 GETVAFQCKATGSPTPRITWLKGGRPL-----SLTERH--HFTP-GNQL----LVVQNVM 756
Query: 329 IDDNGTFVCVAENQAGSTSSNYTIRIV 355
IDD G + C N G+ ++ + I+
Sbjct: 757 IDDAGRYTCEMSNPLGTERAHSQLSIL 783
Score = 38 (18.4 bits), Expect = 3.6e-13, Sum P(3) = 3.6e-13
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 409 ESDKNVNGSNENVVKNLRESPKYTSVNATSATCMD-KVNGGY 449
E NG E+ LR+ + V+ S TC K+ GY
Sbjct: 862 EGGHQANGHIESNGVCLRDPSLFPEVDIHSTTCRQPKLCVGY 903
Score = 37 (18.1 bits), Expect = 5.8e-08, Sum P(2) = 5.8e-08
Identities = 7/18 (38%), Positives = 8/18 (44%)
Query: 598 YRTLPHRRHTAANPNNRY 615
Y T+ H RH RY
Sbjct: 560 YTTILHLRHVTFGHEGRY 577
>UNIPROTKB|F1N7G4 [details] [associations]
symbol:ISLR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0009986 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0045773
InterPro:IPR000372 SMART:SM00013 CTD:57611 OMA:PRASYLE
GeneTree:ENSGT00700000104028 EMBL:DAAA02052518 IPI:IPI01001322
RefSeq:XP_002696730.1 UniGene:Bt.86635 Ensembl:ENSBTAT00000003445
GeneID:617436 KEGG:bta:617436 NextBio:20900664 Uniprot:F1N7G4
Length = 750
Score = 196 (74.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 56/187 (29%), Positives = 93/187 (49%)
Query: 73 GL-VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLS 131
GL N+ + LS +I+V+ AF +T + L +HN ++TV + L L LS
Sbjct: 48 GLPANVTTLSLSANKITVLRRGAFADVTQVTSLWLAHNEVRTVEPGSLAVLSQLKNLDLS 107
Query: 132 GNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSN 190
N I + LS L L+++ + + A L L L+++NN++ T++ G+
Sbjct: 108 HNLISSFPWSDLRNLSALQLLKMNHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTF 167
Query: 191 ILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPI-CSVPPRLSSVTIKQLSI 248
+ L + L+HNP+ C C L+ L+ W ST+ + D I C+ PP L V + +L
Sbjct: 168 DALSALSHLQLYHNPFHCSCSLVWLQAWAASTRVSLPEPDSIACASPPELQGVPVHRLPA 227
Query: 249 DELACEP 255
L+C P
Sbjct: 228 --LSCVP 232
Score = 159 (61.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 41/171 (23%), Positives = 75/171 (43%)
Query: 11 IIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQ 70
++ +ACP C C K Q +C K L V EG+ N L + N + L F
Sbjct: 13 LLGAATACPEPCACVDKYAHQFADCAYKELREVPEGLPANVTTLSLSANKITVLRRGAFA 72
Query: 71 KMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTL 130
+ V ++L+ + ++ + L+ L +LD SHN++ + P + +L L +
Sbjct: 73 DVTQVT--SLWLAHNEVRTVEPGSLAVLSQLKNLDLSHNLISSFPWSDLRNLSALQLLKM 130
Query: 131 SGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ N + + A L L +L ++ + + F L +L L+L +N
Sbjct: 131 NHNRLGSLPRDALGALPDLRSLRINNNRLRTLAPGTFDALSALSHLQLYHN 181
Score = 61 (26.5 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 16/67 (23%), Positives = 33/67 (49%)
Query: 291 DGVPIQNESMSASESHA---VYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
DG P Q E+ + + +HA +T+ + LL+ + + G + C A N+ G+ S
Sbjct: 307 DG-PTQTEAPTLTPAHAWPAPPATQRFLALTNGSLLVPFLSAKEAGVYTCRAHNELGANS 365
Query: 348 SNYTIRI 354
++ + +
Sbjct: 366 TSVRVAV 372
Score = 37 (18.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 559 PADIHLTPEKFMDRDGYPVDFGL 581
P +HL+ E + G P+ GL
Sbjct: 232 PPSVHLSMEPPPEAPGSPLPSGL 254
>UNIPROTKB|F1RQM0 [details] [associations]
symbol:TPBG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005783 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00620000088023 OMA:HNGTLAE
EMBL:CU464077 RefSeq:XP_001927476.1 UniGene:Ssc.22413
Ensembl:ENSSSCT00000004924 GeneID:100158028 KEGG:ssc:100158028
Uniprot:F1RQM0
Length = 419
Score = 128 (50.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKF-QKMGLVN 76
CP C C +TV+CV ++L V + P + L TGN L L F ++ L
Sbjct: 61 CPQPCECS--EAARTVKCVGRNLTEVPADLPPYVRTLFLTGNQLAVLPTGAFARRPPLAE 118
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L + LS R++ + + AF L +L LD SHN L + + F
Sbjct: 119 LSALNLSGSRLTEVQAGAFEHLPSLRLLDLSHNPLANLSAFAF 161
Score = 125 (49.1 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 35/140 (25%), Positives = 62/140 (44%)
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L +L L+ N + + L L L+L + + F L LE L++N +
Sbjct: 211 LRRLELASNHLLYLPLDVLAQLPDLRHLDLRNNSLVSLTYVFFRNLTHLESFHLEDNALK 270
Query: 185 TISGSNI--LPTGLH-GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSS 240
+ + L + H + L NPW CDC L + WL+ T+ + C+ P ++
Sbjct: 271 VLHNGTLAELQSLPHVRVFLDDNPWVCDCHLADMVAWLKETEVVQDKARLTCAFPEKMRH 330
Query: 241 VTIKQLSIDELACEPQITPS 260
+ +L+ +L C+P + PS
Sbjct: 331 RVLLELNSSDLDCDPDLPPS 350
>ZFIN|ZDB-GENE-081104-363 [details] [associations]
symbol:gpr124 "G protein-coupled receptor 124"
species:7955 "Danio rerio" [GO:0004888 "transmembrane signaling
receptor activity" evidence=IEA] [GO:0007166 "cell surface receptor
signaling pathway" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004930 "G-protein coupled receptor activity" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0007218 "neuropeptide signaling pathway"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000203 InterPro:IPR000832 InterPro:IPR001879
InterPro:IPR007110 InterPro:IPR017981 Pfam:PF00002 Pfam:PF01825
Pfam:PF02793 PROSITE:PS50221 PROSITE:PS50227 PROSITE:PS50261
PROSITE:PS50835 PROSITE:PS51450 ZFIN:ZDB-GENE-081104-363
GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004930 GO:GO:0007218 InterPro:IPR003599 SMART:SM00409
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00390000016104 EMBL:CR855861 IPI:IPI00613980
ProteinModelPortal:E7FBY6 Ensembl:ENSDART00000112331 Bgee:E7FBY6
Uniprot:E7FBY6
Length = 1115
Score = 210 (79.0 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 69/266 (25%), Positives = 123/266 (46%)
Query: 102 VDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEV 161
V L+ S+N ++ + + +F SL KL L N I I GAF L+ L L+LS I
Sbjct: 75 VSLNLSNNRIRMLKNGSFAGLSSLEKLDLRNNLISTIMPGAFLGLTALRKLDLSSNRIGC 134
Query: 162 IEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGIDL--HHNPW-TCDCLLIGLRRW 218
+ F GL +L L + N +++ N+ LH + L H+ + +CDC L + +
Sbjct: 135 LTPEMFQGLTNLTKLNISGNIFSSLD-PNVFME-LHSLKLVNFHSEFLSCDCGLRWVPSF 192
Query: 219 LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYL------EIQEGKNV 272
S + + +C+ P RL + ++ L +L+CE + T L + +G +
Sbjct: 193 FRSGSARLGDETLCAYPRRLQNKPLRLLRESDLSCEGPLELHTLSLLPSQRQVVFKGDRL 252
Query: 273 SLLCKVSAIPE-AKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDD 331
C S + + + W +G P+ ++ H S + SEL++ N +++
Sbjct: 253 PFHCTASLVDKITALHWRQNGQPVTSDPTKGI--HLEESVQHDCTFITSELILSNVHVEA 310
Query: 332 NGTFVCVAENQAGSTSSNYTIRIVLK 357
+G + CV G+TS + I +VL+
Sbjct: 311 SGEWECVVSTGRGNTSCSVEI-VVLE 335
>UNIPROTKB|O94933 [details] [associations]
symbol:SLITRK3 "SLIT and NTRK-like protein 3" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 GO:GO:0016021 EMBL:CH471052 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290667
HOVERGEN:HBG056407 EMBL:AB020655 EMBL:AK290024 EMBL:BC114621
IPI:IPI00016467 RefSeq:NP_055741.2 UniGene:Hs.101745
ProteinModelPortal:O94933 SMR:O94933 STRING:O94933
PhosphoSite:O94933 PRIDE:O94933 Ensembl:ENST00000241274
Ensembl:ENST00000475390 GeneID:22865 KEGG:hsa:22865 UCSC:uc003fej.4
CTD:22865 GeneCards:GC03M164904 H-InvDB:HIX0003827 HGNC:HGNC:23501
HPA:HPA017636 MIM:609679 neXtProt:NX_O94933 PharmGKB:PA134958002
eggNOG:NOG292495 InParanoid:O94933 OMA:IAPYQTR OrthoDB:EOG473PQR
PhylomeDB:O94933 GenomeRNAi:22865 NextBio:43383 ArrayExpress:O94933
Bgee:O94933 CleanEx:HS_SLITRK3 Genevestigator:O94933
GermOnline:ENSG00000121871 Uniprot:O94933
Length = 977
Score = 209 (78.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLHNEKFQKMG 73
CPT C C TV C + + E + P N + L + N ++ ++ F
Sbjct: 373 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 432
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
++L ++L RIS + AF L NL L + N ++ + F SL L N
Sbjct: 433 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 490
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I++I+ AF + L L L+ + + AF G SL L L N + + +L
Sbjct: 491 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 549
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDE 250
+ IDL+ NPW C C L+ ++W+E+ + + D +C P L+ ++ + ++
Sbjct: 550 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTIELEV 609
Query: 251 LACE 254
L E
Sbjct: 610 LCPE 613
Score = 192 (72.6 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 72/260 (27%), Positives = 110/260 (42%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMD--PNTQVLDYTGNNLKTL 64
LI +I C C C+ K + C +K + + + L N+++ L
Sbjct: 33 LIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKL 92
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F + L N I L + I + AF GL L L N L +DTF S
Sbjct: 93 YTNSF--LHLNNAVSINLGNNALQDIQTGAFNGLKILKRLYLHENKLDVFRNDTFLGLES 150
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L N IK+I++GAF+ LS L L L+ I ++ F + SL L L N++
Sbjct: 151 LEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SLTHLDLRGNRLK 209
Query: 185 TISGSNILP---TGLHGIDLHHNPWTCDCLLIGLRRWLESTK-TPMAIDPICSVPPRLSS 240
+ +L L + L NPW C C ++ L+ WLE T + D C P
Sbjct: 210 VLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHG 269
Query: 241 VTIKQLSIDELACEPQITPS 260
++++ EL C P ++ S
Sbjct: 270 KDLREIRKTEL-C-PLLSDS 287
Score = 37 (18.1 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 611 PNNRYSREAEFLSRSSQPASYEHYAPADVRY 641
P++ S+E + ++ S S H+ + V Y
Sbjct: 296 PHSSSSKENAWPTKPSSMLSSVHFTASSVEY 326
>UNIPROTKB|E2RGP5 [details] [associations]
symbol:SLITRK3 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007409 "axonogenesis" evidence=IEA]
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007409 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00680000099775 CTD:22865 OMA:IAPYQTR
EMBL:AAEX03017345 RefSeq:XP_851171.1 Ensembl:ENSCAFT00000022943
GeneID:608925 KEGG:cfa:608925 NextBio:20894548 Uniprot:E2RGP5
Length = 979
Score = 209 (78.6 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 64/244 (26%), Positives = 108/244 (44%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMD-P-NTQVLDYTGNNLKTLHNEKFQKMG 73
CPT C C TV C + + E + P N + L + N ++ ++ F
Sbjct: 373 CPTGCTCNLHINDLGLTVNCKERGFNNISELLPRPLNAKKLYLSSNLIQKIYRSDFWNFS 432
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
++L ++L RIS + AF L NL L + N ++ + F SL L N
Sbjct: 433 SLDL--LHLGNNRISYVQDGAFINLPNLKSLFLNGNDIEKLTPGMFRGLQSLHYLYFEFN 490
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I++I+ AF + L L L+ + + AF G SL L L N + + +L
Sbjct: 491 VIREIQPAAFSLMPNLKLLFLNNNLLRTLPTDAFAGT-SLARLNLRKNYFLYLPVAGVLE 549
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPICSVPPRLSSVTIKQLSIDE 250
+ IDL+ NPW C C L+ ++W+E+ + + D +C P L+ ++ + ++
Sbjct: 550 HLNAIVQIDLNENPWDCTCDLVPFKQWIETISSVSVVGDVLCRSPENLTHRDVRTIELEV 609
Query: 251 LACE 254
L E
Sbjct: 610 LCPE 613
Score = 194 (73.4 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 73/260 (28%), Positives = 110/260 (42%)
Query: 7 LIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMD--PNTQVLDYTGNNLKTL 64
LI +I C C C+ K + C +K + + + L N+++ L
Sbjct: 33 LIEDSEEIDEPCFDPCYCEVKESLFHIHCDSKGFTNISQITEFWSRPFKLYLQRNSMRKL 92
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
+ F + L N I L + I S AF GL L L N L +DTF S
Sbjct: 93 YTNSF--LHLNNAVSINLGNNALQDIQSGAFNGLKILKRLYLHENKLDIFRNDTFLGLES 150
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L L N IK+I++GAF+ LS L L L+ I ++ F + SL L L N++
Sbjct: 151 LEYLQADYNVIKRIESGAFRNLSKLRVLILNDNLIPMLPTNLFKAV-SLTHLDLRGNRLK 209
Query: 185 TISGSNILP---TGLHGIDLHHNPWTCDCLLIGLRRWLESTK-TPMAIDPICSVPPRLSS 240
+ +L L + L NPW C C ++ L+ WLE T + D C P
Sbjct: 210 VLFYRGMLDHIGRSLMELQLEENPWNCTCEIVQLKSWLERIPYTALVGDITCETPFHFHG 269
Query: 241 VTIKQLSIDELACEPQITPS 260
++++ EL C P ++ S
Sbjct: 270 KDLREIRKTEL-C-PLLSDS 287
>ZFIN|ZDB-GENE-040912-136 [details] [associations]
symbol:lingo1b "leucine rich repeat and Ig domain
containing 1b" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-040912-136 GO:GO:0016021 GO:GO:0005886
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR003591 SMART:SM00369 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
MEROPS:I43.001 EMBL:CU468744 EMBL:BX470207 EMBL:BC081651
IPI:IPI00483520 RefSeq:NP_001004576.1 UniGene:Dr.12903 HSSP:P21793
ProteinModelPortal:Q66HV9 SMR:Q66HV9 IntAct:Q66HV9 STRING:Q66HV9
Ensembl:ENSDART00000052113 GeneID:447837 KEGG:dre:447837 CTD:447837
eggNOG:NOG278536 GeneTree:ENSGT00690000101682 HOGENOM:HOG000246971
InParanoid:Q66HV9 OMA:NISTIEA OrthoDB:EOG40S0F8 NextBio:20832358
Bgee:Q66HV9 Uniprot:Q66HV9
Length = 622
Score = 206 (77.6 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 56/183 (30%), Positives = 95/183 (51%)
Query: 5 IFLIATIIK-IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
I ++ T++ + CP+ C C + +++V C + LIT+ EG+ +T++LD + N LK
Sbjct: 30 ILMLGTVLSGSATGCPSRCECSAQ--ERSVVCHRRKLITLPEGIPIDTRLLDLSKNRLKA 87
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
++ E+F + L+ + L+ ISVI+ AF L L L +N L+ + F
Sbjct: 88 INPEEF--LNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFTGLS 145
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
+L +L +S N I + FQ L L LE+ + I AF GL SLE L ++ +
Sbjct: 146 NLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNL 205
Query: 184 TTI 186
T++
Sbjct: 206 TSV 208
Score = 170 (64.9 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 71/295 (24%), Positives = 118/295 (40%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
N+ + + F+++ + + +I + + + +K+ GL N+ L ++ L VP
Sbjct: 228 NVNVIRDFSFRRLYRLKILEI-ANWPLLESLTAKSLHGL-NITTLSITNCNLTAVPYVAI 285
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L LS NPI+ ++ L L L + IE +F GL+ L L +
Sbjct: 286 QHLVYLRFFNLSFNPIEVVEGNKMHNLLRLQAFHLVGGRLVSIEPYSFKGLNYLRVLNVS 345
Query: 180 NNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVPP 236
+N ++T+ S G L + LH NP CDC L+ + RRW + P C P
Sbjct: 346 SNSLSTLEESAFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQ---PSCETPE 402
Query: 237 RLSSVTIKQ----LSIDELACEP-QITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWLF 290
L K L + C+ +I + + EG V C+ P I W
Sbjct: 403 FLQGKEFKDFPDVLPPNYFTCQKSKIRDHKAIHRFVDEGTTVQFPCQADGDPTPMIMWQS 462
Query: 291 DGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGS 345
P + + S S + E++ ++ I DNGT+ C A N G+
Sbjct: 463 ---PKKQFITTKSIGRLSVSLDGTLEVRYAQ-------IQDNGTYTCFAVNAGGN 507
Score = 146 (56.5 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 49/170 (28%), Positives = 84/170 (49%)
Query: 36 VNKSLITVVE-GMDPNT---QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N+++I+V+E G N + L NNLK + F GL NL ++ +S +I ++
Sbjct: 104 LNENIISVIEPGAFSNLLGLRTLGLRNNNLKLIQLGVFT--GLSNLTRLDISENKIVILL 161
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
F+ L NL +L+ N L + F SL +LT+ + + T AF L L+T
Sbjct: 162 DYMFQELYNLKELEVGDNDLVFISHRAFHGLSSLEQLTMERCNLTSVPTEAFSHLHNLLT 221
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGIDL 201
L+L + VI D +F L L+ L++ N + ++ LHG+++
Sbjct: 222 LKLRHLNVNVIRDFSFRRLYRLKILEIANWPLL----ESLTAKSLHGLNI 267
Score = 125 (49.1 bits), Expect = 0.00030, P = 0.00030
Identities = 32/113 (28%), Positives = 58/113 (51%)
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
++ + + LS+ R+ I+ + F L DL + N++ + F + L L L N
Sbjct: 73 IDTRLLDLSKNRLKAINPEEFLNYPQLEDLQLNENIISVIEPGAFSNLLGLRTLGLRNNN 132
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
+K I+ G F LS L L++S+ I ++ D F L +L+ L++ +N + IS
Sbjct: 133 LKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQELYNLKELEVGDNDLVFIS 185
>UNIPROTKB|G5E9B3 [details] [associations]
symbol:LGR4 "Leucine-rich repeat-containing G
protein-coupled receptor 4, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016500 "protein-hormone receptor activity" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000276 InterPro:IPR002131
InterPro:IPR017452 Pfam:PF00001 PRINTS:PR00237 PRINTS:PR00373
PROSITE:PS50262 PROSITE:PS51450 GO:GO:0016021 EMBL:CH471064
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0016500 EMBL:AC090597 UniGene:Hs.502176
HGNC:HGNC:13299 ChiTaRS:LGR4 EMBL:AC100771
ProteinModelPortal:G5E9B3 SMR:G5E9B3 Ensembl:ENST00000389858
ArrayExpress:G5E9B3 Bgee:G5E9B3 Uniprot:G5E9B3
Length = 927
Score = 213 (80.0 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 61/188 (32%), Positives = 86/188 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
C C C G + V+C K L V EG+ TQ L GN+L +H + GL L
Sbjct: 29 CAAPCSCD---GDRRVDCSGKGLTAVPEGLSAFTQALQLAGNDLSFIHPKALS--GLKEL 83
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ + L ++ + S+A RGL+ L L N + +VP D+F L L L N + +
Sbjct: 84 KVLTLQNNQLKTVPSEAIRGLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSLTE 143
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GL 196
+ L L L L+ I I D AF L SL L L NNKI ++S L
Sbjct: 144 VPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLDNL 203
Query: 197 HGIDLHHN 204
+DL++N
Sbjct: 204 ETLDLNYN 211
Score = 165 (63.1 bits), Expect = 6.8e-08, Sum P(2) = 6.8e-08
Identities = 53/154 (34%), Positives = 71/154 (46%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
+VL N LKT+ +E + GL LQ + L I+ + +F GL L L N L
Sbjct: 84 KVLTLQNNQLKTVPSEAIR--GLSALQSLRLDANHITSVPEDSFEGLVQLRHLWLDDNSL 141
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
VP + P+L LTL+ N I I AF LS LV L L I + F GLD
Sbjct: 142 TEVPVHPLSNLPTLQALTLALNKISSIPDFAFTNLSSLVVLHLHNNKIRSLSQHCFDGLD 201
Query: 172 SLEWLKLDNNKITTISGS-NILPTGLHGIDLHHN 204
+LE L L+ N + + LP+ L + H N
Sbjct: 202 NLETLDLNYNNLGEFPQAIKALPS-LKELGFHSN 234
Score = 129 (50.5 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 51/162 (31%), Positives = 81/162 (50%)
Query: 54 LDYTGN----NLKTLHN---------EKFQKM-GLVNLQKIYLSRCRISVIDSKAFRGLT 99
L + GN NL LH+ ++F + G V+L+ + L+ +IS I + +
Sbjct: 260 LSFVGNSAFHNLSDLHSLVIRGASMVQQFPNLTGTVHLESLTLTGTKISSIPNNLCQEQK 319
Query: 100 NLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGI 159
L LD S+N ++ +PS F +L +++L N I QIK G FQ L L L+LS+ I
Sbjct: 320 MLRTLDLSYNNIRDLPS--FNGCHALEEISLQRNQIYQIKEGTFQGLISLRILDLSRNLI 377
Query: 160 EVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLHGID 200
I AF L + L + N++T+ PT GL+G++
Sbjct: 378 HEIHSRAFATLGPITNLDVSFNELTSF------PTEGLNGLN 413
Score = 45 (20.9 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 16/50 (32%), Positives = 21/50 (42%)
Query: 511 TQDTQ-DKASEAASVQYSDSGSQCQEWGNVCYNRMQPMQHIVLNNVYNQP 559
TQ D A E S SDS Q Q G C+ + + ++ YN P
Sbjct: 877 TQSAHSDYADEEDSF-VSDSSDQVQACGRACFYQSRGFP--LVRYAYNLP 923
>UNIPROTKB|F1RP64 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:CU076063 RefSeq:XP_001927677.3
Ensembl:ENSSSCT00000010400 GeneID:100152470 KEGG:ssc:100152470
Uniprot:F1RP64
Length = 695
Score = 206 (77.6 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 65/247 (26%), Positives = 108/247 (43%)
Query: 18 CPTSCICKW-KGGKQTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMG 73
CP C C G + C N+++ ++ + + P N Q L N + ++ F +
Sbjct: 340 CPGGCSCDHIPGSGLKMNCNNRNVSSLAD-LKPKLSNVQELFLRDNKIHSIRKSHF--VD 396
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
NL + L I+ +++ F+ L +L L N L T+ + F +L L + N
Sbjct: 397 YKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYN 456
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I+ I G F + L L L+ + + F G+ SL L L NN + + +L
Sbjct: 457 AIQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLD 515
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDE 250
T + IDLH NPW C C ++ ++W E + + + + C P LS DE
Sbjct: 516 QLTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 575
Query: 251 LACEPQI 257
+ C PQ+
Sbjct: 576 I-C-PQL 580
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 69/263 (26%), Positives = 111/263 (42%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWK-------GGKQTVECVNKSLITVVEGMDPNTQV 53
M+ WI L+ T + + T +CK K G V+C K ++ P +Q
Sbjct: 1 MLLWILLLETSLCFAAGNVTGDVCKEKICSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQF 60
Query: 54 --LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L GN+L L +F N +++ + I AF GL + L ++N +
Sbjct: 61 YHLFLHGNSLTRLFPNEFANF--YNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKI 118
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ TF L L N ++ I GAFQ L+ L L L+ I + F +
Sbjct: 119 KSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP 178
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAI 228
+ L L N++ T+ +L G+ I L NPW C C L+ L+ WLE+ K +
Sbjct: 179 -ITHLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIG 237
Query: 229 DPICSVPPRLSSVTIKQLSIDEL 251
+C P RL + + + +L
Sbjct: 238 RVVCEAPTRLQGKDLNETTEQDL 260
>UNIPROTKB|F1MJJ9 [details] [associations]
symbol:SLITRK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 CTD:114798 OMA:NGLPCPG
GeneTree:ENSGT00680000099775 EMBL:DAAA02033738 IPI:IPI00709451
RefSeq:XP_002691955.1 RefSeq:XP_003582925.1 RefSeq:XP_003586770.1
RefSeq:XP_872893.3 Ensembl:ENSBTAT00000054494 GeneID:615880
KEGG:bta:615880 NextBio:20899841 Uniprot:F1MJJ9
Length = 696
Score = 206 (77.6 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 65/247 (26%), Positives = 108/247 (43%)
Query: 18 CPTSCICKW-KGGKQTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMG 73
CP C C G + C N+++ ++ + + P N Q L N + ++ F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLAD-LKPKLSNVQELFLRDNKIHSIRKSHF--VD 397
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
NL + L I+ +++ F+ L +L L N L T+ + F +L L + N
Sbjct: 398 YKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYN 457
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I+ I G F + L L L+ + + F G+ SL L L NN + + +L
Sbjct: 458 AIQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLD 516
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDE 250
T + IDLH NPW C C ++ ++W E + + + + C P LS DE
Sbjct: 517 QLTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 576
Query: 251 LACEPQI 257
+ C PQ+
Sbjct: 577 I-C-PQL 581
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 69/263 (26%), Positives = 111/263 (42%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWK-------GGKQTVECVNKSLITVVEGMDPNTQV 53
M+ WI L+ T + + T +CK K G V+C K ++ P +Q
Sbjct: 1 MLLWILLLETSLCFAAGNVTGDVCKEKICSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQF 60
Query: 54 --LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L GN+L L +F N +++ + I AF GL + L ++N +
Sbjct: 61 YHLFLHGNSLTRLFPNEFANF--YNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKI 118
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ TF L L N ++ I GAFQ L+ L L L+ I + F +
Sbjct: 119 KSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP 178
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAI 228
+ L L N++ T+ +L G+ I L NPW C C L+ L+ WLE+ K +
Sbjct: 179 -ITHLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIG 237
Query: 229 DPICSVPPRLSSVTIKQLSIDEL 251
+C P RL + + + +L
Sbjct: 238 RVVCEAPTRLQGKDLNETTEQDL 260
>UNIPROTKB|Q96PX8 [details] [associations]
symbol:SLITRK1 "SLIT and NTRK-like protein 1" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 MIM:137580 Orphanet:856
EMBL:AB067497 EMBL:AY358289 EMBL:AL355481 EMBL:BC051738
IPI:IPI00102543 RefSeq:NP_443142.1 UniGene:Hs.415478
ProteinModelPortal:Q96PX8 SMR:Q96PX8 STRING:Q96PX8
PhosphoSite:Q96PX8 DMDM:46396997 PaxDb:Q96PX8 PeptideAtlas:Q96PX8
PRIDE:Q96PX8 Ensembl:ENST00000377084 GeneID:114798 KEGG:hsa:114798
UCSC:uc001vlk.3 CTD:114798 GeneCards:GC13M084451 HGNC:HGNC:20297
HPA:HPA012414 MIM:609678 MIM:613229 neXtProt:NX_Q96PX8
PharmGKB:PA134944423 eggNOG:NOG236179 HOGENOM:HOG000290667
HOVERGEN:HBG056407 InParanoid:Q96PX8 OMA:NGLPCPG OrthoDB:EOG428211
PhylomeDB:Q96PX8 GenomeRNAi:114798 NextBio:79234 Bgee:Q96PX8
CleanEx:HS_SLITRK1 Genevestigator:Q96PX8 GermOnline:ENSG00000178235
Uniprot:Q96PX8
Length = 696
Score = 206 (77.6 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 65/247 (26%), Positives = 108/247 (43%)
Query: 18 CPTSCICKW-KGGKQTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMG 73
CP C C G + C N+++ ++ + + P N Q L N + ++ F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLAD-LKPKLSNVQELFLRDNKIHSIRKSHF--VD 397
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
NL + L I+ +++ F+ L +L L N L T+ + F +L L + N
Sbjct: 398 YKNLILLDLGNNNIATVENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYN 457
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I+ I G F + L L L+ + + F G+ SL L L NN + + +L
Sbjct: 458 AIQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLD 516
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDE 250
T + IDLH NPW C C ++ ++W E + + + + C P LS DE
Sbjct: 517 QLTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 576
Query: 251 LACEPQI 257
+ C PQ+
Sbjct: 577 I-C-PQL 581
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 69/263 (26%), Positives = 111/263 (42%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWK-------GGKQTVECVNKSLITVVEGMDPNTQV 53
M+ WI L+ T + + T +CK K G V+C K ++ P +Q
Sbjct: 1 MLLWILLLETSLCFAAGNVTGDVCKEKICSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQF 60
Query: 54 --LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L GN+L L +F N +++ + I AF GL + L ++N +
Sbjct: 61 YHLFLHGNSLTRLFPNEFANF--YNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKI 118
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ TF L L N ++ I GAFQ L+ L L L+ I + F +
Sbjct: 119 KSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP 178
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAI 228
+ L L N++ T+ +L G+ I L NPW C C L+ L+ WLE+ K +
Sbjct: 179 -ITHLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIG 237
Query: 229 DPICSVPPRLSSVTIKQLSIDEL 251
+C P RL + + + +L
Sbjct: 238 RVVCEAPTRLQGKDLNETTEQDL 260
>RGD|68429 [details] [associations]
symbol:Igfals "insulin-like growth factor binding protein, acid
labile subunit" species:10116 "Rattus norvegicus" [GO:0005520
"insulin-like growth factor binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042567 "insulin-like growth
factor ternary complex" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 RGD:68429
GO:GO:0043231 GO:GO:0005634 GO:GO:0007165 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0007155 CTD:3483 HOGENOM:HOG000033909 HOVERGEN:HBG000327
OrthoDB:EOG4FFD1R GO:GO:0005520 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0042567 EMBL:S46785 IPI:IPI00202416 PIR:JC1282
RefSeq:NP_445781.2 UniGene:Rn.7327 ProteinModelPortal:P35859
STRING:P35859 PRIDE:P35859 GeneID:79438 KEGG:rno:79438
UCSC:RGD:68429 InParanoid:P35859 NextBio:614812 ArrayExpress:P35859
Genevestigator:P35859 GermOnline:ENSRNOG00000015061 Uniprot:P35859
Length = 603
Score = 205 (77.2 bits), Expect = 5.7e-13, P = 5.7e-13
Identities = 58/190 (30%), Positives = 93/190 (48%)
Query: 18 CPTSCICKWKG--GKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
CP +C C + +V C +K+L + + + +T+ L GNNL ++ + FQ +
Sbjct: 41 CPVACTCSHDDYTDELSVFCSSKNLTHLPDDIPVSTRALWLDGNNLSSIPSAAFQNLS-- 98
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L + L + ++ +A GL NL L N L+ + F PSL L+LS N +
Sbjct: 99 SLDFLNLQGSWLRSLEPQALLGLQNLYYLHLERNRLRNLAVGLFTHTPSLASLSLSSNLL 158
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
+++ G FQ LS+L L L + V+ D F GL +L L L NK+T + + G
Sbjct: 159 GRLEEGLFQGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFCGLG 218
Query: 196 -LHGIDLHHN 204
L +DL N
Sbjct: 219 ELRELDLSRN 228
Score = 176 (67.0 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 49/162 (30%), Positives = 77/162 (47%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L++++L IS I+ ++ GL+ L++LD + N L +P F L L LS
Sbjct: 408 GLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSY 467
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + + PL L++S +E + + F L + +L L NN + T S
Sbjct: 468 NQLTTLSAEVLGPLQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQ--- 524
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRW-LESTKT-PMAIDPIC 232
P GL + L NPW C C L LR + L++ P + +C
Sbjct: 525 P-GLERLWLDANPWDCSCPLKALRDFALQNPGVVPRFVQTVC 565
Score = 173 (66.0 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 47/133 (35%), Positives = 70/133 (52%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L+++ F + L LQK+YL R I+ + AF G+ L LD SHN +
Sbjct: 223 LDLSRNALRSVKANVF--VHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAG 280
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ DTFP L L L+ N I ++ F+ L +L L+L I + + F GL L
Sbjct: 281 LMEDTFPGLLGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQL 340
Query: 174 EWLKLDNNKITTI 186
E L L++N+IT +
Sbjct: 341 EVLTLNDNQITEV 353
Score = 155 (59.6 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/158 (30%), Positives = 73/158 (46%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ L + N L L FQ GL +L + L + V+ F+GL NL +L +
Sbjct: 146 PSLASLSLSSNLLGRLEEGLFQ--GLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAG 203
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L + F L +L LS N ++ +K F L L L L + I + AF+
Sbjct: 204 NKLTYLQPALFCGLGELRELDLSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPGAFL 263
Query: 169 GLDSLEWLKLDNNKITTISGSNILP--TGLHGIDLHHN 204
G+ +L WL L +N++ + + P GLH + L HN
Sbjct: 264 GMKALRWLDLSHNRVAGLM-EDTFPGLLGLHVLRLAHN 300
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 47/147 (31%), Positives = 72/147 (48%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+L L + FQ GL NL ++ L+ +++ + F GL L +LD S N L++V ++
Sbjct: 180 NSLVVLPDTVFQ--GLGNLHELVLAGNKLTYLQPALFCGLGELRELDLSRNALRSVKANV 237
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F P L KL L N I + GAF + L L+LS + + + F GL L L+L
Sbjct: 238 FVHLPRLQKLYLDRNLITAVAPGAFLGMKALRWLDLSHNRVAGLMEDTFPGLLGLHVLRL 297
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHN 204
+N I ++ L + L HN
Sbjct: 298 AHNAIASLRPRTFKDLHFLEELQLGHN 324
Score = 142 (55.0 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 47/161 (29%), Positives = 73/161 (45%)
Query: 45 EGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDL 104
EG+ +VL N + + F GL N+ + LS + + + F+GL L L
Sbjct: 335 EGLG-QLEVLTLNDNQITEVRVGAFS--GLFNVAVMNLSGNCLRSLPERVFQGLDKLHSL 391
Query: 105 DFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIED 164
H+ L V TF L +L L N I I+ + LS L+ L+L+ + +
Sbjct: 392 HLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELLELDLTTNRLTHLPR 451
Query: 165 AAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
F GL LE+L L N++TT+S + P +D+ HN
Sbjct: 452 QLFQGLGHLEYLLLSYNQLTTLSAEVLGPLQRAFWLDISHN 492
Score = 137 (53.3 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 43/151 (28%), Positives = 74/151 (49%)
Query: 36 VNKSLITVVE-----GMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVI 90
++++LIT V GM + LD + N + L + F GL+ L + L+ I+ +
Sbjct: 249 LDRNLITAVAPGAFLGMKA-LRWLDLSHNRVAGLMEDTFP--GLLGLHVLRLAHNAIASL 305
Query: 91 DSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLV 150
+ F+ L L +L HN ++ + TF L LTL+ N I +++ GAF L +
Sbjct: 306 RPRTFKDLHFLEELQLGHNRIRQLGERTFEGLGQLEVLTLNDNQITEVRVGAFSGLFNVA 365
Query: 151 TLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ LS + + + F GLD L L L+++
Sbjct: 366 VMNLSGNCLRSLPERVFQGLDKLHSLHLEHS 396
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 42/174 (24%), Positives = 74/174 (42%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N V++ +GN L++L FQ GL L ++L + + F GL+ L L N
Sbjct: 363 NVAVMNLSGNCLRSLPERVFQ--GLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDN 420
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
+ ++ + L++L L+ N + + FQ L +L L LS + +
Sbjct: 421 SISSIEEQSLAGLSELLELDLTTNRLTHLPRQLFQGLGHLEYLLLSYNQLTTLSAEVLGP 480
Query: 170 LDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRR-WLES 221
L WL + +N + T++ G + + L +N GL R WL++
Sbjct: 481 LQRAFWLDISHNHLETLAEGLFSSLGRVRYLSLRNNSLQTFSPQPGLERLWLDA 534
>MGI|MGI:1341264 [details] [associations]
symbol:Tpbg "trophoblast glycoprotein" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1341264 GO:GO:0005783
GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00620000088023 HOGENOM:HOG000013090
HOVERGEN:HBG053843 OrthoDB:EOG4SXNDB CTD:7162 eggNOG:NOG301461
OMA:HNGTLAE EMBL:AJ012160 EMBL:AK051162 EMBL:AK143519 EMBL:BC058198
IPI:IPI00468202 RefSeq:NP_001158264.1 RefSeq:NP_035757.2
UniGene:Mm.20864 UniGene:Mm.484180 ProteinModelPortal:Q9Z0L0
SMR:Q9Z0L0 STRING:Q9Z0L0 PhosphoSite:Q9Z0L0 PaxDb:Q9Z0L0
PRIDE:Q9Z0L0 Ensembl:ENSMUST00000006559 Ensembl:ENSMUST00000098500
GeneID:21983 KEGG:mmu:21983 InParanoid:Q3UPI2 NextBio:301700
Bgee:Q9Z0L0 CleanEx:MM_TPBG Genevestigator:Q9Z0L0
GermOnline:ENSMUSG00000035274 Uniprot:Q9Z0L0
Length = 426
Score = 126 (49.4 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMG-LVN 76
CP +C C +TV+CVN++L+ V + P + L TGN + L F + L +
Sbjct: 62 CPAACECS--EAARTVKCVNRNLLEVPADLPPYVRNLFLTGNQMTVLPAGAFARQPPLAD 119
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
L+ + LS + + + AF L L LD SHN L + + F
Sbjct: 120 LEALNLSGNHLKEVCAGAFEHLPGLRRLDLSHNPLTNLSAFAF 162
Score = 125 (49.1 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 37/140 (26%), Positives = 64/140 (45%)
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT 184
L +L L+ N + L L L+L + + A+F L LE L L++N +
Sbjct: 218 LTRLELASNHFLFLPRDLLAQLPSLRYLDLRNNSLVSLTYASFRNLTHLESLHLEDNALK 277
Query: 185 TISGSNILPT-GL-H-GIDLHHNPWTCDCLLIGLRRWLESTKT-PMAIDPICSVPPRLSS 240
+ S + GL H + L +NPW CDC + + WL+ T+ P C+ P ++ +
Sbjct: 278 VLHNSTLAEWHGLAHVKVFLDNNPWVCDCYMADMVAWLKETEVVPDKARLTCAFPEKMRN 337
Query: 241 VTIKQLSIDELACEPQITPS 260
+ L+ +L C+ + S
Sbjct: 338 RGLLDLNSSDLDCDAVLPQS 357
>UNIPROTKB|F1NI07 [details] [associations]
symbol:IGFALS "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GeneTree:ENSGT00690000101816 OMA:FCGLGEL
EMBL:AADN02049426 IPI:IPI00576764 Ensembl:ENSGALT00000003657
Uniprot:F1NI07
Length = 604
Score = 204 (76.9 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 57/155 (36%), Positives = 81/155 (52%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD +GN LK + F K L LQK+YL+ +I+ I +AF G+ +L LD SHN L +
Sbjct: 218 LDLSGNALKGIKINIFVK--LQKLQKLYLNNNQINAIAPRAFMGMKSLRWLDLSHNRLTS 275
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ DTF SL L LS N I ++ F+ L +L L+L I + + F GL L
Sbjct: 276 LYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQL 335
Query: 174 EWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTC 208
E L L+NN++ I L GL+ + + H C
Sbjct: 336 EVLSLNNNQLQDIKAGAFL--GLYNVAVMHLSANC 368
Score = 198 (74.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 50/144 (34%), Positives = 74/144 (51%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L +L++++L IS I+ ++FR L L++LD HN L + F +L L LS N
Sbjct: 404 LTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFN 463
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I I F PL L L+LS + +++A L +L +L L NN + T S + P
Sbjct: 464 QIMDISQNTFSPLRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNNSLETFSVGFLCP 523
Query: 194 T-GLHGIDLHHNPWTCDCLLIGLR 216
+ L + L N W C+C L GLR
Sbjct: 524 SFTLEQLWLGGNNWHCNCSLKGLR 547
Score = 182 (69.1 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 50/154 (32%), Positives = 76/154 (49%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
+VL N L+ + F +GL N+ ++LS I + F G+T L L H+ L
Sbjct: 336 EVLSLNNNQLQDIKAGAF--LGLYNVAVMHLSANCIKTLPEYVFEGVTKLHSLHLEHSCL 393
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+ ++TF SL +L L N I I+ +F+ L L+ L+L + + FVGL
Sbjct: 394 SKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLS 453
Query: 172 SLEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
+LE+L L N+I IS + P L +DL HN
Sbjct: 454 NLEYLFLSFNQIMDISQNTFSPLRRLFWLDLSHN 487
Score = 164 (62.8 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 51/152 (33%), Positives = 71/152 (46%)
Query: 63 TLHNEKFQKM------GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
+L+N F K+ GL NL + L + V+ K F L NL +L + N L +
Sbjct: 147 SLNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQH 206
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
F L +L LSGN +K IK F L L L L+ I I AF+G+ SL WL
Sbjct: 207 QLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRWL 266
Query: 177 KLDNNKITTISGSNILPT-GLHGIDLHHNPWT 207
L +N++T++ L LH + L N T
Sbjct: 267 DLSHNRLTSLYEDTFLGLLSLHVLRLSTNSIT 298
Score = 160 (61.4 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 44/152 (28%), Positives = 77/152 (50%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD + N L +L+ + F +GL++L + LS I+ + + F+ L L +L HN + +
Sbjct: 266 LDLSHNRLTSLYEDTF--LGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWS 323
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ TF L L+L+ N ++ IK GAF L + + LS I+ + + F G+ L
Sbjct: 324 LAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYVFEGVTKL 383
Query: 174 EWLKLDNNKITTISGSNILP-TGLHGIDLHHN 204
L L+++ ++ I + T L + L HN
Sbjct: 384 HSLHLEHSCLSKIRANTFSSLTSLRRLFLQHN 415
Score = 159 (61.0 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 50/190 (26%), Positives = 82/190 (43%)
Query: 18 CPTSCICKWKGGKQ--TVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
CP+ C C + V C ++L + + N + + GNN L F+ +
Sbjct: 36 CPSPCACSLDDYSEELNVFCSGRNLTQLPDDFPTNAKAIWLDGNNFTQLPAAAFRNLS-- 93
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
L + L +++ ++ AF GL +L L N L+ + TF +L+ L+L+ N
Sbjct: 94 GLDFLDLQSSQLAAVEQHAFHGLRSLYHLHLERNRLKYLAPHTFLHTQNLVSLSLNNNLF 153
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-T 194
+++ G F LS L L L + V+ D F L +L L L NK+ + T
Sbjct: 154 SKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHDLPNLRELILAGNKLPYLQHQLFCSLT 213
Query: 195 GLHGIDLHHN 204
L +DL N
Sbjct: 214 ELKELDLSGN 223
Score = 154 (59.3 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 46/156 (29%), Positives = 71/156 (45%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N V+ + N +KTL F+ G+ L ++L +S I + F LT+L L HN
Sbjct: 358 NVAVMHLSANCIKTLPEYVFE--GVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHN 415
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
+ T+ +F + L++L L N + + F LS L L LS I I F
Sbjct: 416 AISTIEDQSFRELHELLELDLKHNRLSHLSPQLFVGLSNLEYLFLSFNQIMDISQNTFSP 475
Query: 170 LDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHN 204
L L WL L +N++ T+ + I L + L +N
Sbjct: 476 LRRLFWLDLSHNQLATLDNAVITQLANLRYLSLRNN 511
Score = 151 (58.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 53/178 (29%), Positives = 84/178 (47%)
Query: 36 VNKSLITVVE-GMDPNTQVLDYTG---NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N +L + VE G+ L Y N+L L ++ F L NL+++ L+ ++ +
Sbjct: 148 LNNNLFSKVEEGLFAGLSNLWYLNLGWNSLVVLPDKVFHD--LPNLRELILAGNKLPYLQ 205
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
+ F LT L +LD S N L+ + + F L KL L+ N I I AF + L
Sbjct: 206 HQLFCSLTELKELDLSGNALKGIKINIFVKLQKLQKLYLNNNQINAIAPRAFMGMKSLRW 265
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNP-WT 207
L+LS + + + F+GL SL L+L N IT++ L + L HN W+
Sbjct: 266 LDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSLRPRTFKDLQFLEELQLGHNRIWS 323
Score = 125 (49.1 bits), Expect = 0.00029, P = 0.00029
Identities = 38/129 (29%), Positives = 62/129 (48%)
Query: 59 NNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N + +L F GL L+ + L+ ++ I + AF GL N+ + S N ++T+P
Sbjct: 319 NRIWSLAERTFD--GLGQLEVLSLNNNQLQDIKAGAFLGLYNVAVMHLSANCIKTLPEYV 376
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
F L L L + + +I+ F L+ L L L I IED +F L L L L
Sbjct: 377 FEGVTKLHSLHLEHSCLSKIRANTFSSLTSLRRLFLQHNAISTIEDQSFRELHELLELDL 436
Query: 179 DNNKITTIS 187
+N+++ +S
Sbjct: 437 KHNRLSHLS 445
Score = 123 (48.4 bits), Expect = 0.00047, P = 0.00047
Identities = 44/152 (28%), Positives = 71/152 (46%)
Query: 56 YTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
Y NN + + F MG+ +L+ + LS R++ + F GL +L L S N + ++
Sbjct: 243 YLNNNQINAIAPRAF--MGMKSLRWLDLSHNRLTSLYEDTFLGLLSLHVLRLSTNSITSL 300
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE 174
TF D L +L L N I + F L L L L+ ++ I+ AF+GL ++
Sbjct: 301 RPRTFKDLQFLEELQLGHNRIWSLAERTFDGLGQLEVLSLNNNQLQDIKAGAFLGLYNVA 360
Query: 175 WLKLDNNKITTISGSNILP--TGLHGIDLHHN 204
+ L N I T+ + T LH + L H+
Sbjct: 361 VMHLSANCIKTLP-EYVFEGVTKLHSLHLEHS 391
>UNIPROTKB|F1P1D7 [details] [associations]
symbol:F1P1D7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004872 "receptor activity" evidence=IEA]
[GO:0009986 "cell surface" evidence=IEA] [GO:0046658 "anchored to
plasma membrane" evidence=IEA] GO:GO:0009986 InterPro:IPR000483
SMART:SM00082 GO:GO:0004872 InterPro:IPR000372 SMART:SM00013
GO:GO:0046658 GeneTree:ENSGT00690000101803 OMA:NCTSHRN
EMBL:AADN02025897 EMBL:AADN02025898 IPI:IPI00574714
ProteinModelPortal:F1P1D7 Ensembl:ENSGALT00000034958 Uniprot:F1P1D7
Length = 413
Score = 200 (75.5 bits), Expect = 8.5e-13, P = 8.5e-13
Identities = 69/260 (26%), Positives = 111/260 (42%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+ + ++CPT C+C TV C + +T+ EG+ +++ + N + L
Sbjct: 12 LMLLGMKVPGAASCPTDCVCY--PSPMTVSCQAHNFVTIPEGIPEDSERIFLQNNQITLL 69
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN-VLQTVPSDTFPDYP 123
F +V L IY + I+ ID F G NL +LD N L+ + ++TF
Sbjct: 70 LRGHFSP-SMVTLW-IYSNN--ITFIDPNTFEGFVNLEELDLGDNRYLRALAANTFQGLV 125
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSK----------CG--IEVIEDAAFVGLD 171
L L L + + +G F L L T C ++ I AF L
Sbjct: 126 KLHALYLYKCGLSSLPSGIFGGLHTLHTFTCKTPHRVLQDDIFCQNQLQWIHRRAFHDLR 185
Query: 172 SLEWLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP 230
L L L NN ++ + G + G L + L+ NPW+CDC L WL + + +
Sbjct: 186 RLTTLFLFNNSLSELQGDCLAHLGALEFLRLNGNPWSCDCKARSLWEWLHRFRGSSS-NV 244
Query: 231 ICSVPPRLSSVTIKQLSIDE 250
IC P R+ +K L ++
Sbjct: 245 ICESPERMHGKDLKVLRAED 264
>RGD|1308858 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10116 "Rattus norvegicus" [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007409 "axonogenesis"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=ISO]
[GO:0035264 "multicellular organism growth" evidence=ISO]
[GO:0042592 "homeostatic process" evidence=ISO] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 RGD:1308858 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
InterPro:IPR000372 SMART:SM00013 EMBL:CH473951 CTD:114798
OMA:NGLPCPG OrthoDB:EOG428211 GeneTree:ENSGT00680000099775
IPI:IPI00373549 RefSeq:NP_001100753.1 UniGene:Rn.31034
Ensembl:ENSRNOT00000012195 GeneID:306147 KEGG:rno:306147
UCSC:RGD:1308858 NextBio:655550 Uniprot:D3Z8D8
Length = 696
Score = 204 (76.9 bits), Expect = 9.4e-13, P = 9.4e-13
Identities = 66/247 (26%), Positives = 108/247 (43%)
Query: 18 CPTSCICKW-KGGKQTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMG 73
CP C C G + C N+++ ++ + + P N Q L N + ++ F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLAD-LKPKLSNVQELFLRDNKIHSIRRSHF--VD 397
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
NL + L I+ I++ F+ L +L L N L T+ + F +L L + N
Sbjct: 398 YKNLILLDLGNNNIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYN 457
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I+ I G F + L L L+ + + F G+ SL L L NN + + +L
Sbjct: 458 AIQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLD 516
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDE 250
T + IDLH NPW C C ++ ++W E + + + + C P LS DE
Sbjct: 517 QLTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNDE 576
Query: 251 LACEPQI 257
+ C PQ+
Sbjct: 577 I-C-PQL 581
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 69/263 (26%), Positives = 111/263 (42%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWK-------GGKQTVECVNKSLITVVEGMDPNTQV 53
M+ WI L+ T + + T +CK K G V+C K ++ P +Q
Sbjct: 1 MLLWILLLETSLCFAAGNVTGDVCKEKICSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQF 60
Query: 54 --LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L GN+L L +F N +++ + I AF GL + L ++N +
Sbjct: 61 YHLFLHGNSLTRLFPNEFANF--YNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKI 118
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ TF L L N ++ I GAFQ L+ L L L+ I + F +
Sbjct: 119 KSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP 178
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAI 228
+ L L N++ T+ +L G+ I L NPW C C L+ L+ WLE+ K +
Sbjct: 179 -ITHLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIG 237
Query: 229 DPICSVPPRLSSVTIKQLSIDEL 251
+C P RL + + + +L
Sbjct: 238 RVVCEAPTRLQGKDLNETTEQDL 260
>ZFIN|ZDB-GENE-080723-63 [details] [associations]
symbol:zgc:195063 "zgc:195063" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 SMART:SM00060 ZFIN:ZDB-GENE-080723-63
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003598
SMART:SM00408 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104028 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG4THVT6
EMBL:BX510944 EMBL:BC163761 IPI:IPI00611152 RefSeq:NP_001122166.1
UniGene:Dr.110759 Ensembl:ENSDART00000077823 GeneID:558559
KEGG:dre:558559 OMA:PYLINIT NextBio:20882530 Uniprot:B3DK88
Length = 636
Score = 203 (76.5 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 75/307 (24%), Positives = 136/307 (44%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
K+ + + + + ++AF L+ L L ++N + +V +F + L +L L GN I
Sbjct: 61 KLRVEKTAVRRVPTEAFYYLSELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIATF 120
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGS--NILP--T 194
+ + + L TL+L + + A L ++ +L + +NK+TT+ +I P +
Sbjct: 121 PWESLKEMPSLKTLDLHNNRLTSVPVEAAPYLINITYLDISSNKLTTLPSDLVDIWPPFS 180
Query: 195 GLHG---------IDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPI--CSVPPRLSSVT 242
G+ + L NPW CDC + L + P+ + D + CS P LS V
Sbjct: 181 GIQPSANTSQKTVLGLQDNPWYCDCRISKLIELSKMAGIPVVLMDQVLTCSGPEHLSGVL 240
Query: 243 IKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMS 301
++ +D+ +P + S + G NV L C + P + W DG + N +
Sbjct: 241 FQRAELDQCV-KPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVNNTVVQ 299
Query: 302 ASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEENV 361
S EG ++ S L +++ D G + C A+N AG+ + T+ + + V
Sbjct: 300 ESPG-------EG--VRWSILSLHSIVFKDAGDYRCKAKNVAGNAEAYITLSV----DGV 346
Query: 362 EVVTVFP 368
+ T FP
Sbjct: 347 QPTTPFP 353
Score = 181 (68.8 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 65/300 (21%), Positives = 122/300 (40%)
Query: 18 CPTSCICKWKG-----GKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKM 72
CP+ C C + G G ++V C + + + + +T L ++ + E F +
Sbjct: 21 CPSQCTCVYHGRSDGTGSRSVLCNDPDMSDIPVNVPLDTVKLRVEKTAVRRVPTEAFYYL 80
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
L+ ++++ I+ +D +F L L +L N++ T P ++ + PSL L L
Sbjct: 81 S--ELRYLWITYNSITSVDPGSFYNLKVLHELRLDGNMIATFPWESLKEMPSLKTLDLHN 138
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + + A L + L++S + + + V + W + + + +
Sbjct: 139 NRLTSVPVEAAPYLINITYLDISSNKLTTLP-SDLVDI----WPPFSGIQPSANTSQKTV 193
Query: 193 PTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI-DPI--CSVPPRLSSVTIKQLSID 249
+ L NPW CDC + L + P+ + D + CS P LS V ++ +D
Sbjct: 194 ------LGLQDNPWYCDCRISKLIELSKMAGIPVVLMDQVLTCSGPEHLSGVLFQRAELD 247
Query: 250 ELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF-DGVPIQNESMSASESHAV 308
+ +P + S + G NV L C + P + W DG + N + S V
Sbjct: 248 QCV-KPTVMTSATKITSPLGSNVLLRCDANGFPTPTLLWTTADGSVVNNTVVQESPGEGV 306
>UNIPROTKB|Q9GZU5 [details] [associations]
symbol:NYX "Nyctalopin" species:9606 "Homo sapiens"
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005622 "intracellular" evidence=IDA]
GO:GO:0007601 GO:GO:0005578 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0050896 GO:GO:0005622
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 EMBL:CH471141
Orphanet:215 EMBL:Z93015 EMBL:AJ278865 EMBL:AF254868 EMBL:BC112242
IPI:IPI00072576 RefSeq:NP_072089.1 UniGene:Hs.302019
ProteinModelPortal:Q9GZU5 SMR:Q9GZU5 STRING:Q9GZU5
PhosphoSite:Q9GZU5 DMDM:23396778 PRIDE:Q9GZU5 DNASU:60506
Ensembl:ENST00000342595 Ensembl:ENST00000378220 GeneID:60506
KEGG:hsa:60506 UCSC:uc004dfh.2 CTD:60506 GeneCards:GC0XP041306
HGNC:HGNC:8082 MIM:300278 MIM:310500 neXtProt:NX_Q9GZU5
PharmGKB:PA31871 eggNOG:NOG328516 HOGENOM:HOG000230477
HOVERGEN:HBG031762 InParanoid:Q9GZU5 KO:K08129 OMA:NISFITP
OrthoDB:EOG43JC4W PhylomeDB:Q9GZU5 GenomeRNAi:60506 NextBio:65415
Bgee:Q9GZU5 CleanEx:HS_NYX Genevestigator:Q9GZU5
GermOnline:ENSG00000188937 Uniprot:Q9GZU5
Length = 481
Score = 200 (75.5 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 56/189 (29%), Positives = 88/189 (46%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL L+ + L R+ + + AF L L + N+L +P+D F L L L G
Sbjct: 204 GLRRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLNDNLLAELPADAFRGLRRLRTLNLGG 263
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
N + ++ F L+ L L L + I +E+ AF L L L L+ N++T ++
Sbjct: 264 NALDRVARAWFADLAELELLYLDRNSIAFVEEGAFQNLSGLLALHLNGNRLTVLAWVAFQ 323
Query: 193 PTGLHG-IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQL----S 247
P G + L NPW CDC L LR W+E + D C+ P ++ + + Q+ S
Sbjct: 324 PGFFLGRLFLFRNPWCCDCRLEWLRDWMEGSGR--VTDVPCASPGSVAGLDLSQVTFGRS 381
Query: 248 IDELACEPQ 256
D L +P+
Sbjct: 382 SDGLCVDPE 390
Score = 141 (54.7 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 44/136 (32%), Positives = 64/136 (47%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL NL +L R RI + S + +GL L L N ++ V + F D L L L+
Sbjct: 180 GLANLTHAHLERGRIEAVASSSLQGLRRLRSLSLQANRVRAVHAGAFGDCGVLEHLLLND 239
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNI 191
N + ++ AF+ L L TL L ++ + A F L LE L LD N I + G+
Sbjct: 240 NLLAELPADAFRGLRRLRTLNLGGNALDRVARAWFADLAELELLYLDRNSIAFVEEGAFQ 299
Query: 192 LPTGLHGIDLHHNPWT 207
+GL + L+ N T
Sbjct: 300 NLSGLLALHLNGNRLT 315
>FB|FBgn0011828 [details] [associations]
symbol:Pxn "Peroxidasin" species:7227 "Drosophila
melanogaster" [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0004601
"peroxidase activity" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001007 InterPro:IPR002007
InterPro:IPR007110 InterPro:IPR010255 InterPro:IPR019791
Pfam:PF00093 Pfam:PF03098 PRINTS:PR00457 PROSITE:PS00436
PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS50292 PROSITE:PS50835
SMART:SM00214 EMBL:AE014296 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 GO:GO:0005578 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0030198 GO:GO:0006909 GO:GO:0020037
GO:GO:0004601 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0042744 SUPFAM:SSF48113 PROSITE:PS00435
Gene3D:1.10.640.10 HSSP:P05164 GeneTree:ENSGT00550000074325
CTD:5829 ChiTaRS:PXN EMBL:U11052 EMBL:AY051536 EMBL:AY052120
RefSeq:NP_523891.2 RefSeq:NP_728759.1 RefSeq:NP_995975.1
RefSeq:NP_995976.1 RefSeq:NP_995977.1 UniGene:Dm.8030
ProteinModelPortal:Q9VZZ4 SMR:Q9VZZ4 IntAct:Q9VZZ4
MINT:MINT-1680107 STRING:Q9VZZ4 PeroxiBase:3369 PeroxiBase:3370
PaxDb:Q9VZZ4 PRIDE:Q9VZZ4 EnsemblMetazoa:FBtr0072951
EnsemblMetazoa:FBtr0072952 EnsemblMetazoa:FBtr0072953
EnsemblMetazoa:FBtr0072954 GeneID:38326 KEGG:dme:Dmel_CG12002
FlyBase:FBgn0011828 InParanoid:Q9VZZ4 OMA:GGRYECQ OrthoDB:EOG4JWSV8
PhylomeDB:Q9VZZ4 GenomeRNAi:38326 NextBio:808033 Bgee:Q9VZZ4
Uniprot:Q9VZZ4
Length = 1527
Score = 207 (77.9 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 70/279 (25%), Positives = 120/279 (43%)
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPL 146
I + + AF GL L L + N L + +L + L+ N + ++ FQ +
Sbjct: 64 IEELPANAFSGLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRM 123
Query: 147 SYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITT--ISGSNILPTGLHGIDLHHN 204
L + L I + F L L L + NNK+T + G N L L + L N
Sbjct: 124 PRLEAIFLENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRL-NNLKRLRLDGN 182
Query: 205 PWTCDCLLIGL-RRW-LESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC-EPQITPST 261
C+C + L RRW L+ + ++I C+ P L + L C +PQ +
Sbjct: 183 AIDCNCGVYSLWRRWHLDVQRQLVSISLTCAAPQMLQNQGFSSLGEHHFKCAKPQFLVAP 242
Query: 262 FYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSE 321
++ G+ V L C+V+ +P +ITW+ + + E + +E +
Sbjct: 243 QDAQVAAGEQVELSCEVTGLPRPQITWMHNTQELGLEEQAQAEI-----------LPSGS 291
Query: 322 LLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEEN 360
LLI +++ D G + C+A N+ G+ S +R+V+ N
Sbjct: 292 LLIRSADTSDMGIYQCIARNEMGALRSQ-PVRLVVNGGN 329
Score = 162 (62.1 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 51/179 (28%), Positives = 84/179 (46%)
Query: 5 IFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTL 64
+ L+A ++ V CP C C ++TV C+ L + V + +TQ LD N+++ L
Sbjct: 14 LLLLAGGVQSVY-CPAGCTCL----ERTVRCIRAKL-SAVPKLPQDTQTLDLRFNHIEEL 67
Query: 65 HNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS 124
F GL L ++L+ ++ + A GLT L + ++N L +P+ F P
Sbjct: 68 PANAFS--GLAQLTTLFLNDNELAYLQDGALNGLTALRFVYLNNNRLSRLPATIFQRMPR 125
Query: 125 LMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
L + L N I Q+ G F L L L + + + F L++L+ L+LD N I
Sbjct: 126 LEAIFLENNDIWQLPAGLFDNLPRLNRLIMYNNKLTQLPVDGFNRLNNLKRLRLDGNAI 184
Score = 83 (34.3 bits), Expect = 5.7e-11, Sum P(2) = 5.7e-11
Identities = 34/144 (23%), Positives = 58/144 (40%)
Query: 232 CSVPPRLSSV-TIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLF 290
C L SV ++ + EL P+I + I+ GK L C P I W
Sbjct: 437 CEARNSLGSVQATARIELKEL---PEILTAPQSQTIKLGKAFVLECDADGNPLPTIDWQL 493
Query: 291 DGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNY 350
+GVP+ + E + +EL++ + + G + C A N+ G TS
Sbjct: 494 NGVPLPGNTPDLQ-----------LENENTELVVGAARQEHAGVYRCTAHNENGETSVEA 542
Query: 351 TIRIVLKEENVEVVTVFPLEYVLI 374
TI++ + ++ + + P V I
Sbjct: 543 TIKVE-RSQSPPQLAIEPSNLVAI 565
Score = 70 (29.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 29/112 (25%), Positives = 47/112 (41%)
Query: 246 LSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPE--AKITWLFDGVPIQNESMSAS 303
+ ++ PQ+ L G + L C+ PE +I+W DG I + ++ +
Sbjct: 544 IKVERSQSPPQLAIEPSNLVAITGTTIELPCQADQ-PEDGLQISWRHDGRLI-DPNVQLA 601
Query: 304 ESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAG--STSSNYTIR 353
E + + G L + N I D G + C +NQ G S S+ TIR
Sbjct: 602 EKYQI----SGA----GSLFVKNVTIPDGGRYECQLKNQFGRASASALVTIR 645
Score = 61 (26.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 28/110 (25%), Positives = 43/110 (39%)
Query: 251 LACEPQIT--PSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAV 308
L P T P + + +V L C S P+ I W +G + + ++ S +
Sbjct: 361 LPSPPHFTHQPHDQIVALHGSGHVLLDCAASGWPQPDIQWFVNG----RQLLQSTPSLQL 416
Query: 309 YSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
+ L++ N GT+ C A N GS + T RI LKE
Sbjct: 417 QAN--------GSLILLQPNQLSAGTYRCEARNSLGSVQA--TARIELKE 456
Score = 42 (19.8 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 304 ESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAEN 341
E+ V+S E+ T+IK++ ++ DN F V EN
Sbjct: 1287 ENPGVFSPEQLTQIKQANFGRVLCDVGDN--FDQVTEN 1322
>ZFIN|ZDB-GENE-080327-15 [details] [associations]
symbol:lrrtm4l1 "leucine rich repeat transmembrane
neuronal 4 like 1" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-080327-15 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0042802 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 EMBL:BX005125
EMBL:BX293550 IPI:IPI00876741 Ensembl:ENSDART00000113737
Bgee:F1QVN0 Uniprot:F1QVN0
Length = 571
Score = 201 (75.8 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 59/191 (30%), Positives = 95/191 (49%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP SC C+ GK V C + + V E + + Q L N+L T+ +F + L
Sbjct: 31 CPYSCHCE---GK-IVHCESSAFQDVPENISVSCQGLSLRYNDLHTMLPYQFAHLN--QL 84
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+YL +I +DS+AF+G+ L +L S N + + + TF P+L L LS N +++
Sbjct: 85 LWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQE 144
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG-L 196
++ G F L L L L G+ I AF+ SLE+L L N++ ++ + L L
Sbjct: 145 LQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRL 204
Query: 197 HGIDLHHNPWT 207
+ L HN ++
Sbjct: 205 MELHLEHNQFS 215
Score = 176 (67.0 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 56/195 (28%), Positives = 93/195 (47%)
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+ + L R+ V+ AF GL+ L++L HN + FP +L L L N I
Sbjct: 179 SLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRI 238
Query: 136 KQIKTGAFQPLSY--LVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ + G P S+ L L++S I+V++ F L +L+ L L++NK+ +S +
Sbjct: 239 RAVNQGL--PWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAA 296
Query: 194 -TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELA 252
L I L N W C + L WL++ + + ICS P L + + S + +
Sbjct: 297 WISLTTISLAGNMWDCGPGICPLVVWLKNFRGTKDTNIICSSPKHLQGEKVIEASKNYID 356
Query: 253 CEP-QITP-STFYLE 265
C+ +IT S YL+
Sbjct: 357 CDDYEITAQSPLYLQ 371
Score = 141 (54.7 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 43/134 (32%), Positives = 66/134 (49%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD+ N + + + FQ G+ L+++ LS RIS + + F G+ NL LD S+N LQ
Sbjct: 89 LDH--NQIMFVDSRAFQ--GVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQE 144
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ F L L L N + I AF L L+L + V+ AF+GL L
Sbjct: 145 LQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRL 204
Query: 174 EWLKLDNNKITTIS 187
L L++N+ + I+
Sbjct: 205 MELHLEHNQFSRIN 218
Score = 126 (49.4 bits), Expect = 0.00021, P = 0.00021
Identities = 66/232 (28%), Positives = 97/232 (41%)
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
+ N + LHN F G+ NL+ + LS ++ + F GL L +L N L +P
Sbjct: 114 SSNRISQLHNVTFH--GVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPV 171
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
F + SL L L N ++ + AF LS L+ L L I F L +L L
Sbjct: 172 RAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRAL 231
Query: 177 KLDNNKITTISGSNILPTG---LHGIDLHHN------PWTCDCL--LIGLRRWLESTKTP 225
L N+I ++ LP L +D+ N P CL L L LES K
Sbjct: 232 YLQWNRIRAVNQG--LPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLN--LESNKLA 287
Query: 226 MAIDPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEG-KNVSLLC 276
+ V +S TI L+ + C P I P +L+ G K+ +++C
Sbjct: 288 NVSQEV--VAAWISLTTIS-LAGNMWDCGPGICPLVVWLKNFRGTKDTNIIC 336
>ZFIN|ZDB-GENE-080327-16 [details] [associations]
symbol:lingo1a "leucine rich repeat and Ig domain
containing 1a" species:7955 "Danio rerio" [GO:0005515 "protein
binding" evidence=IPI] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR007110 PROSITE:PS50835
ZFIN:ZDB-GENE-080327-16 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 GO:GO:0031103
InterPro:IPR026906 Pfam:PF13306 GeneTree:ENSGT00690000101682
EMBL:BX005076 EMBL:CR759783 IPI:IPI01024439
Ensembl:ENSDART00000149965 Bgee:F8W4D7 Uniprot:F8W4D7
Length = 619
Score = 210 (79.0 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 59/196 (30%), Positives = 98/196 (50%)
Query: 5 IFLIATIIK-IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
I ++ T++ + CP+ C C + +++V C K L++V EG+ T++LD + N +KT
Sbjct: 25 ILMLGTVLSGSATGCPSRCECNVQ--ERSVLCHRKKLMSVPEGIPSETRLLDLSKNRIKT 82
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
++ ++F L+++ L+ IS I+ AF L L L N L+ + F
Sbjct: 83 INPDEFS--AFPQLEELELNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFTGLS 140
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
+L KL +S N I + FQ L L +LE+ + I AF GL SLE L L+ +
Sbjct: 141 NLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNL 200
Query: 184 TTISGSNILPTGLHGI 199
T++ T LH +
Sbjct: 201 TSVPTEAF--THLHSL 214
Score = 189 (71.6 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
Identities = 76/298 (25%), Positives = 129/298 (43%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTF 119
N+ ++ + F+++ + + +I + + + + GL NL L ++ L ++P
Sbjct: 223 NINSIRDYSFKRLYRLKVLEI-ANWPYLDTMTTNCLYGL-NLTSLTITNANLTSIPYLAL 280
Query: 120 PDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLD 179
L L +S NPI+ I+ L L L L + VIE +F GL+ L+ L +
Sbjct: 281 RHLVYLRFLNMSYNPIQMIEGNRLHDLLRLQELYLVGGRLSVIEPYSFRGLNYLKVLNVS 340
Query: 180 NNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVPP 236
+N +TT+ S G L + LH NP CDC L+ + RRW + P CS P
Sbjct: 341 SNFLTTLEESVFHSVGNLETLALHDNPLACDCRLLWVFRRRWRLNFNRQQ---PTCSSPE 397
Query: 237 RLSSVTIKQ----LSIDELAC-EPQITPSTFYLE-IQEGKNVSLLCKVSAIPEAKITWLF 290
+ K L + C + +I + + EG V +C+ P I WL
Sbjct: 398 FVQGKEFKDFPDILQPNYFTCRKSRIRDRKPQQKFVDEGTTVHFVCQADGDPTPVIMWLS 457
Query: 291 DGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSS 348
P Q + ++ + +GT L + + I DNGT+ C+A N G+ ++
Sbjct: 458 ---P-QKQFITMKTIGRLTVFPDGT------LEVRYAQIQDNGTYGCIASNAGGNDTA 505
Score = 145 (56.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 43/138 (31%), Positives = 61/138 (44%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P + L+ N + + F L LQ + L ++ +I F GL+NL LD S
Sbjct: 92 PQLEELELNENTISAIEPGAFNN--LYGLQTLGLRSNKLKLIQLGVFTGLSNLTKLDISE 149
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF LS L L L KC + + AF
Sbjct: 150 NKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFT 209
Query: 169 GLDSLEWLKLDNNKITTI 186
L SL L+L N I +I
Sbjct: 210 HLHSLVTLRLRNLNINSI 227
Score = 136 (52.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 59/201 (29%), Positives = 91/201 (45%)
Query: 36 VNKSLITVVE-GMDPNT---QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N++ I+ +E G N Q L N LK + F GL NL K+ +S +I ++
Sbjct: 99 LNENTISAIEPGAFNNLYGLQTLGLRSNKLKLIQLGVFT--GLSNLTKLDISENKIVILL 156
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
F+ L NL L+ N L + F SL +LTL + + T AF L LVT
Sbjct: 157 DYMFQDLYNLRSLEVGDNDLVFISHRAFHGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVT 216
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDN----NKITT--ISGSNILPTGLHGIDLHHNP 205
L L I I D +F L L+ L++ N + +TT + G N+ + +L P
Sbjct: 217 LRLRNLNINSIRDYSFKRLYRLKVLEIANWPYLDTMTTNCLYGLNLTSLTITNANLTSIP 276
Query: 206 WTCDCLLIGLRRWLESTKTPM 226
+ L+ LR +L + P+
Sbjct: 277 YLALRHLVYLR-FLNMSYNPI 296
Score = 38 (18.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 8/33 (24%), Positives = 18/33 (54%)
Query: 612 NNRYSREAEFLSRSSQPASYEHYAPADVRYNIE 644
N++++ E E++ R S A A ++N++
Sbjct: 585 NSKHNIEIEYVPRKSDAGMSSSGADAPRKFNMK 617
>UNIPROTKB|F1PGX0 [details] [associations]
symbol:LINGO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048715 "negative regulation of
oligodendrocyte differentiation" evidence=IEA] [GO:0043491 "protein
kinase B signaling cascade" evidence=IEA] [GO:0031175 "neuron
projection development" evidence=IEA] [GO:0021954 "central nervous
system neuron development" evidence=IEA] [GO:0005154 "epidermal
growth factor receptor binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 GO:GO:0021954 GO:GO:0048715
GeneTree:ENSGT00690000101682 OMA:RIRDRKP EMBL:AAEX03016347
ProteinModelPortal:F1PGX0 Ensembl:ENSCAFT00000028688 Uniprot:F1PGX0
Length = 620
Score = 201 (75.8 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 54/171 (31%), Positives = 86/171 (50%)
Query: 16 SACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLV 75
+ CP C C + + V C K + V EG+ T++LD N +KTL+ ++F
Sbjct: 40 TGCPPRCECSAQD--RAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFP-- 95
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
+L+++ L+ +S ++ AF L +L L N L+ +P F +L KL +S N I
Sbjct: 96 HLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKI 155
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
+ FQ L L +LE+ + I AF GL+SLE L L+ +T+I
Sbjct: 156 VILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI 206
Score = 200 (75.5 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 79/298 (26%), Positives = 124/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 226 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 282
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 283 VRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 342
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 343 SGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 399
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C +I + + EG V +C+ P I WL
Sbjct: 400 EFVQGKEFKDFPDVLLPNYFTCRRARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 459
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 460 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 507
Score = 124 (48.7 bits), Expect = 0.00038, P = 0.00038
Identities = 41/138 (29%), Positives = 61/138 (44%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P+ + L+ N + + F L +L+ + L R+ +I F GL+NL LD S
Sbjct: 95 PHLEELELNENIVSAVEPGAFNN--LFSLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 152
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N + + F D +L L + N + I AF L+ L L L KC + I A
Sbjct: 153 NKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALS 212
Query: 169 GLDSLEWLKLDNNKITTI 186
L SL L+L + I I
Sbjct: 213 HLHSLIVLRLRHLNINAI 230
Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00080
Identities = 32/106 (30%), Positives = 54/106 (50%)
Query: 82 LSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTG 141
L + RI ++ F +L +L+ + N++ V F + SL L L N +K I G
Sbjct: 78 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLG 137
Query: 142 AFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
F LS L L++S+ I ++ D F L +L+ L++ +N + IS
Sbjct: 138 VFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYIS 183
Score = 121 (47.7 bits), Expect = 0.00080, P = 0.00080
Identities = 55/201 (27%), Positives = 85/201 (42%)
Query: 36 VNKSLITVVE-GMDPNT---QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N+++++ VE G N + L N LK + F GL NL K+ +S +I ++
Sbjct: 102 LNENIVSAVEPGAFNNLFSLRTLGLRSNRLKLIPLGVFT--GLSNLTKLDISENKIVILL 159
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
F+ L NL L+ N L + F SL +LTL + I T A L L+
Sbjct: 160 DYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHSLIV 219
Query: 152 LELSKCGIEVIEDAAFVGLDSLE------WLKLDNNKITTISGSNILPTGLHGIDLHHNP 205
L L I I D +F L L+ W LD + G N+ + +L P
Sbjct: 220 LRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVP 279
Query: 206 WTCDCLLIGLRRWLESTKTPM 226
+ L+ LR +L + P+
Sbjct: 280 YLAVRHLVYLR-FLNLSYNPI 299
>ZFIN|ZDB-GENE-060503-114 [details] [associations]
symbol:amigo1 "adhesion molecule with Ig-like
domain 1" species:7955 "Danio rerio" [GO:0007420 "brain
development" evidence=IGI] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450
ZFIN:ZDB-GENE-060503-114 GO:GO:0007420 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 CTD:57463 GeneTree:ENSGT00530000063545 EMBL:CU462975
IPI:IPI00497206 RefSeq:XP_001924023.1 UniGene:Dr.141809
ProteinModelPortal:F1QF94 Ensembl:ENSDART00000109732
GeneID:100144409 KEGG:dre:100144409 NextBio:20791439 Bgee:F1QF94
Uniprot:F1QF94
Length = 491
Score = 199 (75.1 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 105/372 (28%), Positives = 159/372 (42%)
Query: 7 LIATIIKIVSA---CPTSCICKWKGGKQTVECVNKSLITVVEGMDPN-TQVLDYTGNNLK 62
++A I KI + C CIC V C +K +T++ PN T VLD + N +
Sbjct: 18 ILALIPKIRGSTLNCHKMCIC----ASNIVSC-SKMNLTMIPSDLPNYTAVLDISFNEIT 72
Query: 63 TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDY 122
L + + K L NL + LS +S I S+AF + L LD S NVL+ + F
Sbjct: 73 GLRAQ-WTKHKLPNLHNLLLSHNGLSFISSEAFIFVKQLRYLDLSSNVLRQLDEFIFEPL 131
Query: 123 PSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELS-----KCGIEVIEDAAFVGLDSLEWLK 177
L L L N I QI AF L L L LS + +E+++D LD L L
Sbjct: 132 IHLEVLLLYNNHISQIDRTAFLGLGSLQKLYLSQNLVSRFPLELVKDKN--RLDKLSLLD 189
Query: 178 LDNN--KITTISGSNILPTGL-HGIDLHHNPWTCDCLLIGLR-RW-LESTKTPMAI--DP 230
L +N K+ I LP + +G+ H+N CDC L L W + + + D
Sbjct: 190 LSSNRIKVLPIQDLQALPAYIKNGLYFHNNTLICDCELYSLMAHWNIRRLNSALDFKDDH 249
Query: 231 ICSVP-PRLSSVTIKQLSIDELACEP-QITPSTFYLEIQEGKNVSLLCKVSAIPEAKITW 288
C P P + + +L+I + C + T YLE + + L C +K TW
Sbjct: 250 TCVHPGPDKRVLRLYELNI-HMNCSTFKETDREAYLE----QTLILDCDTRHREMSK-TW 303
Query: 289 LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSS 348
+ G + + + S AV + E+K +D+G + C A ++
Sbjct: 304 MLPGNVVVSPGNNLS---AVVLPDGDLELK-------TIRPEDSGVYTCFAVSEY----L 349
Query: 349 NYTIRIVLKEEN 360
N T+ +V+K N
Sbjct: 350 NETLYVVVKVHN 361
>RGD|1308668 [details] [associations]
symbol:Lingo1 "leucine rich repeat and Ig domain containing 1"
species:10116 "Rattus norvegicus" [GO:0005154 "epidermal growth
factor receptor binding" evidence=ISO] [GO:0021954 "central nervous
system neuron development" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0043491 "protein kinase B
signaling cascade" evidence=ISO] [GO:0048715 "negative regulation
of oligodendrocyte differentiation" evidence=ISO]
InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 RGD:1308668 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0043491
GO:GO:0031175 InterPro:IPR013098 Pfam:PF07679 GO:GO:0021954
MEROPS:I43.001 GO:GO:0048715 HOGENOM:HOG000246971 OrthoDB:EOG40S0F8
CTD:84894 HOVERGEN:HBG057546 RefSeq:NP_001094192.1 UniGene:Rn.20269
GeneID:315691 KEGG:rno:315691 NextBio:669664 EMBL:BC092632
IPI:IPI00766651 ProteinModelPortal:Q562A6 STRING:Q562A6
PhosphoSite:Q562A6 UCSC:RGD:1308668 InParanoid:Q562A6
Genevestigator:Q562A6 Uniprot:Q562A6
Length = 517
Score = 199 (75.1 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 79/298 (26%), Positives = 123/298 (41%)
Query: 60 NLKTLHNEKFQKMGLVNLQKIYLSRCR-ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDT 118
N+ + + F++ L L+ + +S + + GL NL L +H L VP
Sbjct: 123 NINAIRDYSFKR--LYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLA 179
Query: 119 FPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKL 178
L L LS NPI I+ L L ++L + V+E AF GL+ L L +
Sbjct: 180 VRHLVYLRFLNLSYNPIGTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 239
Query: 179 DNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGL--RRWLESTKTPMAIDPICSVP 235
N++TT+ S G L + L NP CDC L+ + RRW + P C+ P
Sbjct: 240 SGNQLTTLEESAFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQ---PTCATP 296
Query: 236 PRLSSVTIKQ----LSIDELACE-PQITP-STFYLEIQEGKNVSLLCKVSAIPEAKITWL 289
+ K L + C I + + EG V +C+ P I WL
Sbjct: 297 EFVQGKEFKDFPDVLLPNYFTCRRAHIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWL 356
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTS 347
P + +SA + + +GT L + + + DNGT++C+A N G+ S
Sbjct: 357 S---P-RKHLVSAKSNGRLTVFPDGT------LEVRYAQVQDNGTYLCIAANAGGNDS 404
Score = 131 (51.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 38/113 (33%), Positives = 56/113 (49%)
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPL 146
+S ++ AF L NL L N L+ +P F +L KL +S N I + FQ L
Sbjct: 4 VSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDL 63
Query: 147 SYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLHGI 199
L +LE+ + I AF GL+SLE L L+ +T+I + + LHG+
Sbjct: 64 YNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL--SHLHGL 114
Score = 120 (47.3 bits), Expect = 0.00080, P = 0.00080
Identities = 37/113 (32%), Positives = 51/113 (45%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L NL+ + L R+ +I F GL+NL LD S N + + F D +L L + N
Sbjct: 15 LFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN 74
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
+ I AF L+ L L L KC + I A L L L+L + I I
Sbjct: 75 DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 127
>UNIPROTKB|E1BKC2 [details] [associations]
symbol:RXFP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016500 "protein-hormone receptor activity"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0007189 "adenylate cyclase-activating G-protein coupled
receptor signaling pathway" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR000276
InterPro:IPR002172 InterPro:IPR008112 InterPro:IPR017452
Pfam:PF00001 Pfam:PF00057 PRINTS:PR00237 PRINTS:PR01739
PROSITE:PS50068 PROSITE:PS50262 PROSITE:PS51450 SMART:SM00192
GO:GO:0016021 GO:GO:0007189 InterPro:IPR003591 SMART:SM00369
GO:GO:0008584 Gene3D:4.10.400.10 InterPro:IPR023415 SUPFAM:SSF57424
PROSITE:PS01209 InterPro:IPR000372 SMART:SM00013 GO:GO:0016500
GeneTree:ENSGT00650000093266 OMA:KILCCAD EMBL:DAAA02033083
IPI:IPI00687137 ProteinModelPortal:E1BKC2
Ensembl:ENSBTAT00000020135 Uniprot:E1BKC2
Length = 755
Score = 201 (75.8 bits), Expect = 2.3e-12, P = 2.3e-12
Identities = 57/174 (32%), Positives = 84/174 (48%)
Query: 19 PTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQ 78
P C+CK G + +ECVN L +V + N +L NN+ +L ++ F K L+
Sbjct: 113 PQRCVCK---GTE-LECVNAGLKSVPV-VSSNVTLLSLKKNNIHSLSDKVFIKY--TELK 165
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
KI+L R I+ I KAF GL NL L +HN + T+ F D L L L NPI +I
Sbjct: 166 KIFLQRNCITYISRKAFFGLHNLQILYLNHNCITTLRPGVFKDLHQLTWLILDDNPISRI 225
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
F L+ L L + ++V+ + L W+ L+ N I ++ S L
Sbjct: 226 SQRLFTGLNSLFFLSMVNNHLQVLPKQMCAQMPQLNWMDLEGNGIKFLTNSTFL 279
Score = 167 (63.8 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/132 (31%), Positives = 62/132 (46%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P +D GN +K L N F + +L ++L R +I + K F L NL +LD S
Sbjct: 258 PQLNWMDLEGNGIKFLTNSTF--LSCSSLTVLFLPRNQIGFVPEKTFSSLKNLGELDLSS 315
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N++ +P F D L KL LS NP+ + F L L +L+L + I I F
Sbjct: 316 NMISELPPHIFKDLKCLQKLNLSSNPLLYLHKSQFGSLKQLQSLDLERIEIPNINTRMFQ 375
Query: 169 GLDSLEWLKLDN 180
+ +L ++ N
Sbjct: 376 PMKNLSYIYFKN 387
Score = 123 (48.4 bits), Expect = 0.00064, P = 0.00063
Identities = 42/137 (30%), Positives = 59/137 (43%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N Q+L N + TL F+ L L + L IS I + F GL +L L +N
Sbjct: 187 NLQILYLNHNCITTLRPGVFKD--LHQLTWLILDDNPISRISQRLFTGLNSLFFLSMVNN 244
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
LQ +P P L + L GN IK + F S L L L + I + + F
Sbjct: 245 HLQVLPKQMCAQMPQLNWMDLEGNGIKFLTNSTFLSCSSLTVLFLPRNQIGFVPEKTFSS 304
Query: 170 LDSLEWLKLDNNKITTI 186
L +L L L +N I+ +
Sbjct: 305 LKNLGELDLSSNMISEL 321
>UNIPROTKB|E1BG29 [details] [associations]
symbol:GP5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010544 "negative regulation of platelet activation"
evidence=IEA] [GO:0007160 "cell-matrix adhesion" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007160
GO:GO:0010544 GeneTree:ENSGT00700000104286 OMA:AMIKIGQ
EMBL:DAAA02001732 EMBL:DAAA02001733 EMBL:DAAA02001734
EMBL:DAAA02001735 IPI:IPI00711271 Ensembl:ENSBTAT00000017571
NextBio:20873574 Uniprot:E1BG29
Length = 583
Score = 199 (75.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 66/227 (29%), Positives = 103/227 (45%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N L + N L+ L F ++G L+++ L ++ + + AFR LT L L+ S +
Sbjct: 267 NLTFLTLSENPLEELPKVLFGEIG--GLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLS 324
Query: 110 V-LQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
L +P D F L L LS + + G + L L + L + + A F
Sbjct: 325 PRLSALPEDAFRGLGELQVLALSSTGLASLPAGLLRGLCRLRHVSLRSNRLRALPSALFR 384
Query: 169 GLDSLEWLKLDNNKITTISGS--NILPTGLHGIDLHHNPWTCDCLLIGLRRWLE--STKT 224
L SLE ++LD+N++ T+ G LP L G+ L HNPW CDC L WL +
Sbjct: 385 NLSSLEEVQLDHNQLETLPGDAFEALPR-LAGVLLGHNPWRCDCGLGPFLAWLRRHAGLV 443
Query: 225 PMAIDPICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKN 271
A P C P + + L +L C P+ P ++ + EG++
Sbjct: 444 GRAEPPRCHGPGPHAGRLLWTLQAGDLGC-PR--PESWTRLVAEGQS 487
Score = 151 (58.2 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 52/186 (27%), Positives = 82/186 (44%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVE-GMDPN-TQVLDYTGNNLKTLHNEKFQKMGLV 75
CP +C C ++ Q C ++ + G+ N T +L + TL N F M +
Sbjct: 21 CPPTCRCAFRDAAQ---CSRGTVAGIAALGLPTNLTHILLFQMGR-GTLQNNSFSDMTV- 75
Query: 76 NLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPI 135
LQ++ LS +S I F L L S N + +PS + L +L L GN +
Sbjct: 76 -LQRLLLSDSHVSAIAPGTFNDPIKLKTLRLSRNKITHLPSALLDNLVLLEQLFLDGNEL 134
Query: 136 KQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTG 195
K + FQ L +L L L++ + + + F L +L+ L L N +T LP G
Sbjct: 135 KSLDQNLFQKLVHLQELFLNQNQLAFLPASLFTHLGNLKLLDLSGNNLTH------LPEG 188
Query: 196 LHGIDL 201
L G+ +
Sbjct: 189 LFGVQV 194
Score = 133 (51.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 44/157 (28%), Positives = 74/157 (47%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N ++LD +GNNL L F V LQK+ L R++ ++S L L +L N
Sbjct: 171 NLKLLDLSGNNLTHLPEGLFGVQ--VKLQKLLLHSNRLASLESGLLDSLRALTELQLHTN 228
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
L+++ F SL LTLS N ++ + + F L L LS+ +E + F
Sbjct: 229 HLRSIVPGAFDRLRSLSSLTLSENRLEFLPSALFLHSHNLTFLTLSENPLEELPKVLFGE 288
Query: 170 LDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHNP 205
+ L L+L + ++ T+ + TGL +++ +P
Sbjct: 289 IGGLRELRLKSTQLRTLPAAAFRNLTGLRVLEVSLSP 325
>UNIPROTKB|Q9ULH4 [details] [associations]
symbol:LRFN2 "Leucine-rich repeat and fibronectin type-III
domain-containing protein 2" species:9606 "Homo sapiens"
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
Pfam:PF00041 PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450
SMART:SM00060 GO:GO:0016021 GO:GO:0005886 Gene3D:2.60.40.10
InterPro:IPR013783 EMBL:CH471081 GO:GO:0030054 GO:GO:0045211
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 MEROPS:I43.001
HOGENOM:HOG000237343 HOVERGEN:HBG052352 EMBL:AB033072 EMBL:AK291474
EMBL:AL591063 EMBL:BC142616 IPI:IPI00008107 RefSeq:NP_065788.1
UniGene:Hs.250015 ProteinModelPortal:Q9ULH4 SMR:Q9ULH4
STRING:Q9ULH4 PhosphoSite:Q9ULH4 DMDM:62286951 PaxDb:Q9ULH4
PRIDE:Q9ULH4 Ensembl:ENST00000338305 GeneID:57497 KEGG:hsa:57497
UCSC:uc003oph.1 CTD:57497 GeneCards:GC06M040406 HGNC:HGNC:21226
HPA:HPA013653 MIM:612808 neXtProt:NX_Q9ULH4 PharmGKB:PA134913285
eggNOG:NOG311542 InParanoid:Q9ULH4 KO:K16355 OMA:HWVAPDD
OrthoDB:EOG469QT6 ChiTaRS:LRFN2 GenomeRNAi:57497 NextBio:63812
Bgee:Q9ULH4 CleanEx:HS_LRFN2 Genevestigator:Q9ULH4
GermOnline:ENSG00000156564 Uniprot:Q9ULH4
Length = 789
Score = 201 (75.8 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 90/343 (26%), Positives = 145/343 (42%)
Query: 30 KQTVEC-VNKSLITVVEGMD-PN-TQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCR 86
++TVE + + I + D N T ++D T + H + F + L +L+ ++L R
Sbjct: 52 RRTVELRLGGNFIIHISRQDFANMTGLVDLTLSRNTISHIQPFSFLDLESLRSLHLDSNR 111
Query: 87 ISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP-SLMKLTLSGNPIKQIKTGAFQP 145
+ + RGL NL L ++N L + + F D+ +L L LS N + + + +
Sbjct: 112 LPSLGEDTLRGLVNLQHLIVNNNQLGGIADEAFEDFLLTLEDLDLSYNNLHGLPWDSVRR 171
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI---------SGSNILPTGL 196
+ L L L ++ I + F L L L L +N++ + S + T
Sbjct: 172 MVNLHQLSLDHNLLDHIAEGTFADLQKLARLDLTSNRLQKLPPDPIFARSQASALTATPF 231
Query: 197 H---GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
NP C+C L+ LRR LE ++ C P L + +E C
Sbjct: 232 APPLSFSFGGNPLHCNCELLWLRR-LERDDD---LET-CGSPGGLKGRYFWHVREEEFVC 286
Query: 254 EPQ-ITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTE 312
EP IT T L + EG+ +L CK P I W+ P + + S AVY +
Sbjct: 287 EPPLITQHTHKLLVLEGQAATLKCKAIGDPSPLIHWV---AP-DDRLVGNSSRTAVY--D 340
Query: 313 EGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
GT L I+ + D+G F C+A N AG ++ + IV
Sbjct: 341 NGT------LDIFITTSQDSGAFTCIAANAAGEATAMVEVSIV 377
Score = 142 (55.0 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 53/178 (29%), Positives = 82/178 (46%)
Query: 14 IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKM- 72
+V ACP C+C+ C +K L+ V +D T L GN + + + F M
Sbjct: 17 VVDACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLGGNFIIHISRQDFANMT 76
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GLV+L LSR IS I +F L +L L N L ++ DT +L L ++
Sbjct: 77 GLVDLT---LSRNTISHIQPFSFLDLESLRSLHLDSNRLPSLGEDTLRGLVNLQHLIVNN 133
Query: 133 NPIKQIKTGAFQPLSYLVTLE---LSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS 187
N + I AF+ +L+TLE LS + + + + +L L LD+N + I+
Sbjct: 134 NQLGGIADEAFE--DFLLTLEDLDLSYNNLHGLPWDSVRRMVNLHQLSLDHNLLDHIA 189
>MGI|MGI:2679446 [details] [associations]
symbol:Slitrk1 "SLIT and NTRK-like family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007399 "nervous system development" evidence=IMP]
[GO:0007409 "axonogenesis" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISS]
[GO:0030534 "adult behavior" evidence=IMP] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042592
"homeostatic process" evidence=IMP] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:2679446 GO:GO:0016021 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0007409
GO:GO:0030534 GO:GO:0035264 InterPro:IPR000372 SMART:SM00013
GO:GO:0042592 CTD:114798 eggNOG:NOG236179 HOVERGEN:HBG056407
OMA:NGLPCPG OrthoDB:EOG428211 EMBL:AB097570 EMBL:AK014285
IPI:IPI00110451 RefSeq:NP_951020.1 UniGene:Mm.257268
ProteinModelPortal:Q810C1 SMR:Q810C1 STRING:Q810C1
PhosphoSite:Q810C1 PaxDb:Q810C1 PRIDE:Q810C1
Ensembl:ENSMUST00000100322 GeneID:76965 KEGG:mmu:76965
GeneTree:ENSGT00680000099775 InParanoid:Q810C1 ChiTaRS:SLITRK1
NextBio:346195 Bgee:Q810C1 CleanEx:MM_SLITRK1 Genevestigator:Q810C1
GermOnline:ENSMUSG00000075478 Uniprot:Q810C1
Length = 696
Score = 200 (75.5 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 65/247 (26%), Positives = 108/247 (43%)
Query: 18 CPTSCICKW-KGGKQTVECVNKSLITVVEGMDP---NTQVLDYTGNNLKTLHNEKFQKMG 73
CP C C G + C N+++ ++ + + P N Q L N + ++ F +
Sbjct: 341 CPGGCSCDHIPGSGLKMNCNNRNVSSLAD-LKPKLSNVQELFLRDNKIHSIRKSHF--VD 397
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
NL + L I+ I++ F+ L +L L N L T+ + F +L L + N
Sbjct: 398 YKNLILLDLGNNNIANIENNTFKNLLDLRWLYMDSNYLDTLSREKFAGLQNLEYLNVEYN 457
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I+ I G F + L L L+ + + F G+ SL L L NN + + +L
Sbjct: 458 AIQLILPGTFNAMPKLRILILNNNLLRSLPVDVFAGV-SLSKLSLHNNYFMYLPVAGVLD 516
Query: 194 --TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI-CSVPPRLSSVTIKQLSIDE 250
T + IDLH NPW C C ++ ++W E + + + + C P LS +E
Sbjct: 517 QLTSIIQIDLHGNPWECSCTIVPFKQWAERLGSEVLMSDLKCETPVNFFRKDFMLLSNEE 576
Query: 251 LACEPQI 257
+ C PQ+
Sbjct: 577 I-C-PQL 581
Score = 198 (74.8 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 69/263 (26%), Positives = 111/263 (42%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWK-------GGKQTVECVNKSLITVVEGMDPNTQV 53
M+ WI L+ T + + T +CK K G V+C K ++ P +Q
Sbjct: 1 MLLWILLLETSLCFAAGNVTGDVCKEKICSCNEIEGDLHVDCEKKGFTSLQRFTAPTSQF 60
Query: 54 --LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
L GN+L L +F N +++ + I AF GL + L ++N +
Sbjct: 61 YHLFLHGNSLTRLFPNEFANF--YNAVSLHMENNGLHEIVPGAFLGLQLVKRLHINNNKI 118
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
++ TF L L N ++ I GAFQ L+ L L L+ I + F +
Sbjct: 119 KSFRKQTFLGLDDLEYLQADFNLLRDIDPGAFQDLNKLEVLILNDNLISTLPANVFQYVP 178
Query: 172 SLEWLKLDNNKITTISGSNILPT--GLHGIDLHHNPWTCDCLLIGLRRWLEST-KTPMAI 228
+ L L N++ T+ +L G+ I L NPW C C L+ L+ WLE+ K +
Sbjct: 179 -ITHLDLRGNRLKTLPYEEVLEQIPGIAEILLEDNPWDCTCDLLSLKEWLENIPKNALIG 237
Query: 229 DPICSVPPRLSSVTIKQLSIDEL 251
+C P RL + + + +L
Sbjct: 238 RVVCEAPTRLQGKDLNETTEQDL 260
>RGD|1562655 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10116 "Rattus
norvegicus" [GO:0002237 "response to molecule of bacterial origin"
evidence=IEA] [GO:0002755 "MyD88-dependent toll-like receptor
signaling pathway" evidence=IEA;ISO] [GO:0004888 "transmembrane
signaling receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005768 "endosome" evidence=ISO] [GO:0009615
"response to virus" evidence=ISO] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IEA;ISO] [GO:0034178 "toll-like receptor 13 signaling
pathway" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043408 "regulation of MAPK cascade"
evidence=ISO] [GO:0045087 "innate immune response"
evidence=IEA;ISO] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104
PROSITE:PS51450 SMART:SM00255 RGD:1562655 GO:GO:0007165
InterPro:IPR003591 SMART:SM00369 GO:GO:0005622 SUPFAM:SSF52200
PANTHER:PTHR24367:SF26 IPI:IPI00362009 Ensembl:ENSRNOT00000038868
Uniprot:F1LYZ1
Length = 987
Score = 202 (76.2 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 51/148 (34%), Positives = 75/148 (50%)
Query: 58 GNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
G N +H + L +LQ++ L++C++S I +K + L NL LD SHN ++ P
Sbjct: 375 GQNSDLVHLNDSEFNALPSLQRLNLNKCQLSFISNKTWSSLQNLTILDLSHNKFKSFPDF 434
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
F L L+LS NPI ++ AF L L L L+ C I I+ +F +LE L
Sbjct: 435 AFSPLKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAACWIVTIDRYSFTQFPNLEVLD 494
Query: 178 LDNNKITTISGSNILPTG-LHGIDLHHN 204
L +N I T++ P LH + L HN
Sbjct: 495 LGDNNIRTLNHGTFQPLKKLHTLILSHN 522
Score = 172 (65.6 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 46/135 (34%), Positives = 73/135 (54%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N +LD + N K+ + F L L+ + LSR I+ +++ AF GL +L +L+ +
Sbjct: 417 NLTILDLSHNKFKSFPDFAFSP--LKRLEFLSLSRNPITELNNLAFSGLFSLKELNLAAC 474
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
+ T+ +F +P+L L L N I+ + G FQPL L TL LS +E++E AF G
Sbjct: 475 WIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSG 534
Query: 170 LDSLEWLKLDNNKIT 184
L L +L L N ++
Sbjct: 535 LTGLRYLDLMYNSLS 549
Score = 161 (61.7 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 50/140 (35%), Positives = 69/140 (49%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN +VLD NN++TL++ FQ L L + LS R+ +++S AF GLT L LD +
Sbjct: 488 PNLEVLDLGDNNIRTLNHGTFQP--LKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMY 545
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPI--KQIKTGAFQPLSYL-----VTLELSKCGIEV 161
N L F L+ L L N I + +T + P L + LE K GI+V
Sbjct: 546 NSLSYFHKHHFMGLEKLLVLKLGFNKITYETTRTLQYPPFMKLKSLKQLNLEGQKHGIQV 605
Query: 162 IEDAAFVGLDSLEWLKLDNN 181
+ F GL SL+ L L N
Sbjct: 606 VPRNFFQGLSSLQELLLGKN 625
Score = 148 (57.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 44/133 (33%), Positives = 67/133 (50%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
+ L + N + L+N F GL +L+++ L+ C I ID +F NL LD N +
Sbjct: 443 EFLSLSRNPITELNNLAFS--GLFSLKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI 500
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+T+ TF L L LS N ++ +++ AF L+ L L+L + F+GL+
Sbjct: 501 RTLNHGTFQPLKKLHTLILSHNRLEIMESNAFSGLTGLRYLDLMYNSLSYFHKHHFMGLE 560
Query: 172 SLEWLKLDNNKIT 184
L LKL NKIT
Sbjct: 561 KLLVLKLGFNKIT 573
>UNIPROTKB|Q2KIF2 [details] [associations]
symbol:LRG1 "Leucine-rich alpha-2-glycoprotein 1"
species:9913 "Bos taurus" [GO:0050873 "brown fat cell
differentiation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005615 CTD:116844 eggNOG:COG4886 HOGENOM:HOG000234378
HOVERGEN:HBG000045 OMA:RCAGPEA OrthoDB:EOG4TMR2P GO:GO:0050873
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GeneTree:ENSGT00690000102197 EMBL:DAAA02019605 EMBL:BC112660
IPI:IPI00702820 RefSeq:NP_001039642.1 UniGene:Bt.53757
Ensembl:ENSBTAT00000003618 GeneID:514663 KEGG:bta:514663
InParanoid:Q2KIF2 NextBio:20871452 Uniprot:Q2KIF2
Length = 346
Score = 193 (73.0 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 61/194 (31%), Positives = 87/194 (44%)
Query: 58 GNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSD 117
GN LK L E GL L+ + LS ++ + T+L+ LD S+N LQT+P D
Sbjct: 148 GNQLKFL--EASWLHGLKALRHLDLSENQLHSLPPGLLENFTDLLTLDLSNNQLQTLPPD 205
Query: 118 TFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
+L +L L GN ++ + G P L L L+ + + AF GL L+ L
Sbjct: 206 LLRGPLNLERLHLEGNRLQVLGEGLLAPQPKLRYLFLNDNRLASVAAGAFRGLQKLDMLD 265
Query: 178 LDNNKITTISGSNILPTGL------HGIDLHHNPWTCDCLLIGLRRWLESTKTPMAI--D 229
L NN +TT+ G G D+ +NPW CD L L RWL + + M
Sbjct: 266 LSNNLLTTVPTGLWTSLGKAARNLKDGFDISNNPWICDQNLADLYRWLVANENKMFFRNH 325
Query: 230 PICSVPPRLSSVTI 243
C+ P L T+
Sbjct: 326 TRCAGPEALKGQTL 339
>MGI|MGI:2444854 [details] [associations]
symbol:Amigo3 "adhesion molecule with Ig like domain 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0007155 "cell adhesion" evidence=ISO] [GO:0007157
"heterophilic cell-cell adhesion" evidence=ISO;ISS] [GO:0007399
"nervous system development" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISO]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2444854 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003599 SMART:SM00409
InterPro:IPR003591 SMART:SM00369 GO:GO:0007157 InterPro:IPR000372
SMART:SM00013 eggNOG:NOG146733 HOGENOM:HOG000231327
HOVERGEN:HBG080231 GeneTree:ENSGT00530000063545 CTD:386724
OMA:VCLATGP OrthoDB:EOG4DBTDR EMBL:AY237004 EMBL:AB167510
EMBL:AK028619 EMBL:AK088051 EMBL:AK129456 IPI:IPI00453796
RefSeq:NP_796249.1 UniGene:Mm.449806 ProteinModelPortal:Q8C2S7
SMR:Q8C2S7 PhosphoSite:Q8C2S7 PRIDE:Q8C2S7 DNASU:320844
Ensembl:ENSMUST00000085060 GeneID:320844 KEGG:mmu:320844
UCSC:uc009rom.1 InParanoid:Q8C2S7 NextBio:397545 Bgee:Q8C2S7
CleanEx:MM_AMIGO3 Genevestigator:Q8C2S7
GermOnline:ENSMUSG00000032593 Uniprot:Q8C2S7
Length = 508
Score = 197 (74.4 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 91/342 (26%), Positives = 140/342 (40%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP CIC + C + L + + LD + N LK LH + L
Sbjct: 34 CPDICIC----AADVLSCAGRGLQDLPVALPTTAAELDLSHNALKRLHPGWLAPLS--RL 87
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ ++L ++ V+ AF + L LD S N+L+ + + L KL L N +
Sbjct: 88 RALHLGYNKLEVLGHGAFTNASGLRTLDLSSNMLRMLHTHDLDGLEELEKLLLFNNSLMH 147
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAF-----VGLDSLEWLKLDNNKITTISGSNI- 191
+ AFQ L L L LS C + +F +GL L L L +N + IS +
Sbjct: 148 LDLDAFQGLRMLSHLYLS-CN--ELSSFSFNHLHGLGLTRLRTLDLSSNWLKHISIPELA 204
Query: 192 -LPTGLHG-IDLHHNPWTCDCLLIGL-RRWLE---STKTPMAIDPICSVPPRLSSVTIKQ 245
LPT L + LH+NP CDC L L RRW + S + C V ++S ++
Sbjct: 205 ALPTYLKNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLVF-KVSESRVRF 263
Query: 246 LSIDEL------ACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNES 299
+ A P + L Q G+++ L C S +P ++ W V +NE
Sbjct: 264 FEHSRVFKNCSVAAAPGLELPEEQLHAQVGQSLRLFCNTS-VPATRVAW----VSPKNEL 318
Query: 300 M--SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVA 339
+ AS+ ++ +G+ L I G FVC+A
Sbjct: 319 LVAPASQDGSIAVLADGS------LAIGRVQEQHAGVFVCLA 354
>MGI|MGI:1919006 [details] [associations]
symbol:Cpn2 "carboxypeptidase N, polypeptide 2"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 MGI:MGI:1919006 GO:GO:0005576 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
CTD:1370 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000294123
HOVERGEN:HBG050814 KO:K13023 OMA:WQCDCHL OrthoDB:EOG4WM4TF
EMBL:AK005049 EMBL:BC025836 EMBL:BC138287 EMBL:BC138288
IPI:IPI00119522 RefSeq:NP_082180.2 UniGene:Mm.290614
ProteinModelPortal:Q9DBB9 SMR:Q9DBB9 STRING:Q9DBB9 PaxDb:Q9DBB9
PRIDE:Q9DBB9 Ensembl:ENSMUST00000064856 GeneID:71756 KEGG:mmu:71756
UCSC:uc007ywm.1 GeneTree:ENSGT00700000104286 InParanoid:B2RR89
NextBio:334421 Bgee:Q9DBB9 CleanEx:MM_CPN2 Genevestigator:Q9DBB9
GermOnline:ENSMUSG00000023176 Uniprot:Q9DBB9
Length = 547
Score = 205 (77.2 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 56/183 (30%), Positives = 80/183 (43%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L NL + L + + F L+ L S+N L+T+P F + L+ LTLS N
Sbjct: 264 LHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTNLSRLVSLTLSHN 323
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
I + F+ L LV L L + + A F L L+ L L N++TT+ G I
Sbjct: 324 AITDLPEHVFRNLEQLVKLSLDSNNLTALHPALFHNLSRLQLLNLSRNQLTTLPGG-IFD 382
Query: 194 TG--LHGIDLHHNPWTCDCLLIGLRRWLESTKTPMA-IDPICSVPPRLSSVTIKQLSIDE 250
T L + L NPW CDC L L WL ++ C+ P L + L ++
Sbjct: 383 TNYDLFNLALLGNPWQCDCHLSYLTSWLRLYNNQISNTHTFCAGPAYLKGQLVPNLKQEQ 442
Query: 251 LAC 253
L C
Sbjct: 443 LIC 445
Score = 161 (61.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 51/161 (31%), Positives = 75/161 (46%)
Query: 29 GKQTVECVNKSLITVVEGMD---PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRC 85
G Q ++ N L + EG + Q L GN + L F + L +L+ ++L
Sbjct: 194 GLQMLKLSNNMLARLPEGALGSLSSLQELFLDGNAITELSPHLFSQ--LFSLEMLWLQHN 251
Query: 86 RISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
I + F L NL L N L+T+P F L+ L+LS N ++ I GAF
Sbjct: 252 AICHLPVSLFSSLHNLTFLSLKDNALRTLPEGLFAHNQGLLHLSLSYNQLETIPEGAFTN 311
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
LS LV+L LS I + + F L+ L L LD+N +T +
Sbjct: 312 LSRLVSLTLSHNAITDLPEHVFRNLEQLVKLSLDSNNLTAL 352
Score = 150 (57.9 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 48/202 (23%), Positives = 88/202 (43%)
Query: 4 WIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
W+ L+ + ++ CP C C G++ V C ++ L + + P+ + + T
Sbjct: 9 WVSLLL-LARLTQPCPVGCDCF---GRE-VFCSDEQLADIPPDIPPHITDIVFVETAFTT 63
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
+ F G NL K+ ++ ++ AF GL L DL+ + + + + + F +
Sbjct: 64 VRTRAFS--GSPNLTKVVFLNTQVRHLEPDAFGGLPRLQDLEITGSPVSNLSAHIFSNLS 121
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKI 183
SL KLTL + + + F + L +L+L + + F L L L L N +
Sbjct: 122 SLEKLTLDFDRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLL 181
Query: 184 TTI-SGSNILPTGLHGIDLHHN 204
T + G+ TGL + L +N
Sbjct: 182 TQLPKGAFQSLTGLQMLKLSNN 203
Score = 148 (57.2 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 44/139 (31%), Positives = 67/139 (48%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P Q L+ TG+ + L F + +L+K+ L R++ + F + L L
Sbjct: 97 PRLQDLEITGSPVSNLSAHIFSNLS--SLEKLTLDFDRLAGLPEDLFCHMDILESLQLQG 154
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L+T+P F L L L+ N + Q+ GAFQ L+ L L+LS + + + A
Sbjct: 155 NQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLARLPEGALG 214
Query: 169 GLDSLEWLKLDNNKITTIS 187
L SL+ L LD N IT +S
Sbjct: 215 SLSSLQELFLDGNAITELS 233
Score = 138 (53.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 46/152 (30%), Positives = 71/152 (46%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L GN L+TL FQ L +L+ + L++ ++ + AF+ LT L L S+N+L
Sbjct: 150 LQLQGNQLRTLPGRLFQS--LRDLRTLNLAQNLLTQLPKGAFQSLTGLQMLKLSNNMLAR 207
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+P SL +L L GN I ++ F L L L L I + + F L +L
Sbjct: 208 LPEGALGSLSSLQELFLDGNAITELSPHLFSQLFSLEMLWLQHNAICHLPVSLFSSLHNL 267
Query: 174 EWLKLDNNKITTI-SGSNILPTGLHGIDLHHN 204
+L L +N + T+ G GL + L +N
Sbjct: 268 TFLSLKDNALRTLPEGLFAHNQGLLHLSLSYN 299
Score = 129 (50.5 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 38/138 (27%), Positives = 63/138 (45%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN + + ++ L + F GL LQ + ++ +S + + F L++L L
Sbjct: 73 PNLTKVVFLNTQVRHLEPDAFG--GLPRLQDLEITGSPVSNLSAHIFSNLSSLEKLTLDF 130
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
+ L +P D F L L L GN ++ + FQ L L TL L++ + + AF
Sbjct: 131 DRLAGLPEDLFCHMDILESLQLQGNQLRTLPGRLFQSLRDLRTLNLAQNLLTQLPKGAFQ 190
Query: 169 GLDSLEWLKLDNNKITTI 186
L L+ LKL NN + +
Sbjct: 191 SLTGLQMLKLSNNMLARL 208
Score = 38 (18.4 bits), Expect = 3.2e-12, Sum P(2) = 3.2e-12
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 302 ASESHAVYSTEEGTEIKKSE------LLIYNSNID--DNGTFVCVAENQAGSTSSNYTIR 353
A+ S YS EGT + E L I S+ D D+ V + + G SS +R
Sbjct: 476 AAHSQCAYSNPEGTVLLACEESRCRWLNIQLSSRDGSDSAAMVYNSSQEWGLRSSCGLLR 535
Query: 354 IVLKEE 359
+ + E
Sbjct: 536 VTVSIE 541
>MGI|MGI:2443955 [details] [associations]
symbol:Lrig3 "leucine-rich repeats and immunoglobulin-like
domains 3" species:10090 "Mus musculus" [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 MGI:MGI:2443955 GO:GO:0016021 Gene3D:2.60.40.10
InterPro:IPR013783 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00690000101816 InterPro:IPR025875 Pfam:PF12799
HOGENOM:HOG000113380 HOVERGEN:HBG052353 CTD:121227 OMA:SHHQFVT
OrthoDB:EOG4K6G3K EMBL:AY505341 EMBL:BC065142 EMBL:AK044994
EMBL:AK078783 EMBL:AK129481 IPI:IPI00399981 RefSeq:NP_796126.4
UniGene:Mm.275586 PDB:3SO5 PDBsum:3SO5 ProteinModelPortal:Q6P1C6
SMR:Q6P1C6 PhosphoSite:Q6P1C6 PRIDE:Q6P1C6
Ensembl:ENSMUST00000074807 GeneID:320398 KEGG:mmu:320398
UCSC:uc007hhc.2 InParanoid:Q6P1C6 NextBio:396650 Bgee:Q6P1C6
Genevestigator:Q6P1C6 GermOnline:ENSMUSG00000020105 Uniprot:Q6P1C6
Length = 1117
Score = 161 (61.7 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 77/300 (25%), Positives = 121/300 (40%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ- 112
LD T N+L L + F +GL L +++ ++S I AFRGLT+L LD +N +
Sbjct: 316 LDLTFNHLSRLDDSSF--LGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISW 373
Query: 113 TVP--SDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGL 170
T+ S F L +L L GN I+ I AF L L L+LS I ++ AF +
Sbjct: 374 TIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNAIMSLQSNAFSQM 433
Query: 171 DSLEWLKLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP 230
L+ L L+ + + LP W + +S P
Sbjct: 434 KKLQQLHLNTSSLLCDCQLRWLPQ-----------WVAE-------NNFQSFVNASCAHP 475
Query: 231 ICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKIT--W 288
+ +V+ D+ +PQIT +G +VS C ++ ++ +T W
Sbjct: 476 QLLKGRSIFTVSPDGFVCDDFP-KPQITVQPETQSAIKGSDVSFTCSAASSSDSPMTFAW 534
Query: 289 LFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSS 348
D +Q+ M + +H E E + L + N G + CV N GS+ S
Sbjct: 535 KKDNEALQDAEME-NYAHLRAQGGELMEYT-TILRLRNVEFTSEGKYQCVISNHFGSSYS 592
Score = 155 (59.6 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 47/164 (28%), Positives = 79/164 (48%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P Q L+ N +K + FQ +G L+ + + R ++ + AF GL+N+ L H
Sbjct: 215 PQLQHLELNRNKIKNVDGLTFQGLGA--LKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDH 272
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N L + L +L LS N I +I A++ L L+L+ + ++D++F+
Sbjct: 273 NNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTFNHLSRLDDSSFL 332
Query: 169 GLDSLEWLKLDNNKITTISGSNILP-TGLHGIDLHHNP--WTCD 209
GL L L + NNK++ I+ T L +DL +N WT +
Sbjct: 333 GLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIE 376
Score = 126 (49.4 bits), Expect = 4.3e-09, Sum P(2) = 4.3e-09
Identities = 38/125 (30%), Positives = 60/125 (48%)
Query: 73 GLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSG 132
GL N++ + L ++ I GL L +L S N + + D + L +L L+
Sbjct: 261 GLSNMEVLQLDHNNLTEITKGWLYGLLMLRELHLSQNAINRISPDAWEFCQKLSELDLTF 320
Query: 133 NPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNI 191
N + ++ +F LS L L + + I D AF GL SL+ L L NN+I+ TI +
Sbjct: 321 NHLSRLDDSSFLGLSLLNALHIGNNKVSYIADCAFRGLTSLKTLDLRNNEISWTIEDMSG 380
Query: 192 LPTGL 196
+GL
Sbjct: 381 AFSGL 385
Score = 106 (42.4 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 30/108 (27%), Positives = 61/108 (56%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
++ LS R+S I + + L +L ++ ++N L+T+P+ ++ +L+L+GN I +I
Sbjct: 78 RLDLSHNRLSFIQTSSLSHLQSLQEVKLNNNELETIPN-LGSISANIRQLSLAGNAIDKI 136
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI 186
+ L TL+LS I + AF L L++L ++NN+++++
Sbjct: 137 LPEQLEAFQSLETLDLSNNNISELR-TAFPPLQ-LKYLYINNNRVSSM 182
Score = 105 (42.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 49/181 (27%), Positives = 86/181 (47%)
Query: 31 QTVECVNKSLITV--VEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRIS 88
Q V+ N L T+ + + N + L GN + + E+ + +L+ + LS IS
Sbjct: 101 QEVKLNNNELETIPNLGSISANIRQLSLAGNAIDKILPEQLE--AFQSLETLDLSNNNIS 158
Query: 89 VIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPIKQIKTGAFQPLS 147
+ + AF L L L ++N + ++ F + S L+ L L+ N I I F+ L
Sbjct: 159 ELRT-AFPPL-QLKYLYINNNRVSSMEPGYFDNLASTLLVLKLNRNRISAIPPKMFK-LP 215
Query: 148 YLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHNPW 206
L LEL++ I+ ++ F GL +L+ LK+ N +T + G+ + + + L HN
Sbjct: 216 QLQHLELNRNKIKNVDGLTFQGLGALKSLKMQRNGVTKLMDGAFWGLSNMEVLQLDHNNL 275
Query: 207 T 207
T
Sbjct: 276 T 276
Score = 99 (39.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 33/118 (27%), Positives = 52/118 (44%)
Query: 239 SSVTIK-QLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQN 297
SS ++K +L+I+ L P T + L I+ G L C P +I W DG
Sbjct: 589 SSYSVKAKLTINML---PSFTKTPMDLTIRAGAMARLECAAVGHPAPQIAWQKDG----G 641
Query: 298 ESMSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
A+ ++ E I + I+D G + C A+N AGS S+N T+ ++
Sbjct: 642 TDFPAARERRMHVMPED-----DVFFIVDVKIEDIGVYSCTAQNSAGSVSANATLTVL 694
Score = 93 (37.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/81 (32%), Positives = 39/81 (48%)
Query: 52 QVLDYTGNNLK-TLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNV 110
+ LD N + T+ + GL L+++ L RI I KAF GL L LD S N
Sbjct: 362 KTLDLRNNEISWTIEDMSGAFSGLDRLRQLILQGNRIRSITKKAFAGLDTLEHLDLSGNA 421
Query: 111 LQTVPSDTFPDYPSLMKLTLS 131
+ ++ S+ F L +L L+
Sbjct: 422 IMSLQSNAFSQMKKLQQLHLN 442
Score = 70 (29.7 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 19/90 (21%), Positives = 38/90 (42%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ +G+ L C P ++ W D P+ +E H + G ++ L+I
Sbjct: 708 VTKGETAVLQCIAGGSPPPRLNWTKDDSPLV-----VTERHFFAA---GNQL----LIIV 755
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
+S++ D G + C N G+ N + ++
Sbjct: 756 DSDVSDAGKYTCEMSNTLGTERGNVRLSVI 785
>ZFIN|ZDB-GENE-040724-113 [details] [associations]
symbol:si:ch211-191d15.2 "si:ch211-191d15.2"
species:7955 "Danio rerio" [GO:0016226 "iron-sulfur cluster
assembly" evidence=IEA] [GO:0005506 "iron ion binding"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-040724-113 InterPro:IPR003591 SMART:SM00369
InterPro:IPR000372 SMART:SM00013 EMBL:AL845326
GeneTree:ENSGT00690000102271 IPI:IPI00504200
ProteinModelPortal:F1QT78 Ensembl:ENSDART00000140801 Uniprot:F1QT78
Length = 221
Score = 174 (66.3 bits), Expect = 3.7e-12, P = 3.7e-12
Identities = 64/226 (28%), Positives = 104/226 (46%)
Query: 14 IVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLD---------------YTG 58
I+S CP C C G V C + L T+ + NT VL Y+G
Sbjct: 2 IMSPCPNGCCCPHPGA--LVLCESLGLHTLPRSVPLNTAVLSVARNRLCNVDNMFQPYSG 59
Query: 59 -NNLKTLHNE--KFQKMGL-VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTV 114
L HN+ +F + GL +L+ + L +I+ I + + R L NL LD N +++V
Sbjct: 60 LQELSLSHNQLVRFPR-GLPASLETLQLQENQITYITTGSLRQLGNLTRLDLEDNRIRSV 118
Query: 115 PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLE 174
L LTL GN + ++ P S L L++S+ I ++ ++ L +L+
Sbjct: 119 QPGALLSLTRLRMLTLKGNRLSRLPANL--PSS-LTHLDVSENCISALDLSSLFMLVNLQ 175
Query: 175 WLKLDNNKITTISGSNILPTG-LHGIDLHHNPWTCDCLLIGLRRWL 219
L++++N + TI L +DL +N W C+C ++ L RWL
Sbjct: 176 VLRINSNCLHTIPERAFDGLSHLRSVDLANNLWVCECEIMYLYRWL 221
>UNIPROTKB|F1Q3G2 [details] [associations]
symbol:SLIT3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070100 "negative regulation of
chemokine-mediated signaling pathway" evidence=IEA] [GO:0061364
"apoptotic process involved in luteolysis" evidence=IEA]
[GO:0051414 "response to cortisol stimulus" evidence=IEA]
[GO:0050919 "negative chemotaxis" evidence=IEA] [GO:0048846 "axon
extension involved in axon guidance" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0035385 "Roundabout
signaling pathway" evidence=IEA] [GO:0032870 "cellular response to
hormone stimulus" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0010629 "negative regulation of gene
expression" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000742 InterPro:IPR001881
InterPro:IPR018097 Pfam:PF00008 PROSITE:PS01187 PROSITE:PS50026
PROSITE:PS51450 SMART:SM00179 SMART:SM00181 InterPro:IPR000152
GO:GO:0008285 GO:GO:0005615 GO:GO:0030308 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0005509
InterPro:IPR013032 PROSITE:PS00022 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
PROSITE:PS01186 GO:GO:0032870 GO:GO:0010629 InterPro:IPR001791
SMART:SM00282 PROSITE:PS00010 PROSITE:PS50025 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 InterPro:IPR006207 PROSITE:PS01185
PROSITE:PS01225 SMART:SM00041 Pfam:PF02210 GO:GO:0048846
GO:GO:0070100 Pfam:PF12661 Pfam:PF01463 GO:GO:0051414
GeneTree:ENSGT00700000104083 GO:GO:0050919 GO:GO:0035385
GO:GO:0061364 OMA:SVDCHGL EMBL:AAEX03003028 EMBL:AAEX03003027
Ensembl:ENSCAFT00000026988 Uniprot:F1Q3G2
Length = 1319
Score = 214 (80.4 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 55/170 (32%), Positives = 91/170 (53%)
Query: 87 ISVIDSKA-FRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQP 145
ISV+++ F+ L NL ++ S+N ++ V F S+ +L L+GN ++ + F+
Sbjct: 341 ISVLEATGIFKKLPNLRKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRG 400
Query: 146 LSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHN 204
LS L TL L I + + F GL S+ L L +N+ITTI+ G+ L I+L N
Sbjct: 401 LSSLKTLMLRSNLITCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Query: 205 PWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELACE 254
P+ C+C L L +WL + ++ +P C P L + I+ ++I + CE
Sbjct: 461 PFNCNCHLAWLGKWLRKRRI-VSGNPRCQKPFFLKEIPIQDVAIQDFTCE 509
Score = 177 (67.4 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 54/176 (30%), Positives = 77/176 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
+I L + I I + AF L +D S N + + D F SL L L GN I ++
Sbjct: 108 EIRLEQNSIKSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITEL 167
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLH 197
G F L L L L+ I + F L +L L L +NK+ TIS P +
Sbjct: 168 AKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQ 227
Query: 198 GIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPICSVPPRLSSVTIKQLSIDELAC 253
+ L NP+ CDC L L +L+ + CS P RL++ I Q+ + C
Sbjct: 228 TLHLAQNPFVCDCHLKWLADYLQDNPIETS-GARCSSPRRLANKRIGQIKSKKFRC 282
Score = 150 (57.9 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 49/160 (30%), Positives = 72/160 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V C N+ L T+ +G+ + L GN+L + E L +L
Sbjct: 522 CPEQCTCL----ETVVRCSNRGLHTLPKGIPKDVTELYLEGNHLTAVPREL---SALRHL 574
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
I LS I V+ + F +++L L S+N L+ +P F SL LTL GN I
Sbjct: 575 TLIDLSNNSIGVLTNYTFSNMSHLSTLILSYNRLRCIPIHAFDGLRSLRVLTLHGNDISS 634
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLK 177
+ G+F L+ L L L + D + L EW+K
Sbjct: 635 VPEGSFSDLTSLSHLALGTNPLHC--DCSLRWLS--EWVK 670
Score = 140 (54.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 43/165 (26%), Positives = 72/165 (43%)
Query: 17 ACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVN 76
+CP++C C V+C K L + + + N++K++ F +
Sbjct: 76 SCPSACTCS----NNIVDCRGKGLTEIPANLPEGIVEIRLEQNSIKSIPAGAFTQYK--K 129
Query: 77 LQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
L++I +S+ +IS I AF+GL +L L N + + F SL L L+ N I
Sbjct: 130 LKRIDISKNQISDIAPDAFQGLKSLTSLVLYGNKITELAKGLFDGLVSLQLLLLNANKIN 189
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
++ FQ L L L L ++ I F L +++ L L N
Sbjct: 190 CLRVNTFQDLQNLNLLSLYDNKLQTISKGLFAPLQAIQTLHLAQN 234
Score = 137 (53.3 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 50/164 (30%), Positives = 68/164 (41%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C+ G V+C N+ L + + L N + L K L NL
Sbjct: 302 CPEKCRCE--G--TIVDCSNQKLARIPSHLPEYVTDLRLNDNEISVLEATGIFKK-LPNL 356
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+KI LS +I + AF G ++ +L + N L+TV F SL L L N I
Sbjct: 357 RKINLSNNKIKEVREGAFDGAASVQELMLTGNQLETVHGRMFRGLSSLKTLMLRSNLITC 416
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
+ F LS + L L I I AF L SL + L +N
Sbjct: 417 VSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINLLSN 460
Score = 39 (18.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 439 ATCMDKVNGGYIIA-DGHNDMMLYATDSGILVATNNMNTY 477
A C+D VNG I G + ++ +L+ T+ + Y
Sbjct: 884 AQCVDAVNGYTCICPQGFSGLLCEQPPPMVLLQTSPCDQY 923
>MGI|MGI:3039578 [details] [associations]
symbol:Ecm2 "extracellular matrix protein 2, female organ
and adipocyte specific" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=IDA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005614 "interstitial matrix" evidence=IDA]
[GO:0008201 "heparin binding" evidence=IDA] [GO:0010811 "positive
regulation of cell-substrate adhesion" evidence=IDA] [GO:0030198
"extracellular matrix organization" evidence=IDA] [GO:0031012
"extracellular matrix" evidence=IDA] [GO:0070052 "collagen V
binding" evidence=IDA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR001007 Pfam:PF00093 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51450 SMART:SM00214 MGI:MGI:3039578 eggNOG:COG4886
GO:GO:0030198 GO:GO:0008201 GO:GO:0010811
GeneTree:ENSGT00700000104006 GO:GO:0005614 GO:GO:0070052
InterPro:IPR026906 Pfam:PF13306 HSSP:P24014 CTD:1842
HOGENOM:HOG000112319 HOVERGEN:HBG031529 KO:K08119 OrthoDB:EOG4868CR
OMA:AVWSPKP EMBL:AK038812 EMBL:AK040995 EMBL:AK134746 EMBL:BC065151
EMBL:BC089559 IPI:IPI00461535 RefSeq:NP_001012324.1
UniGene:Mm.386931 ProteinModelPortal:Q5FW85 SMR:Q5FW85
STRING:Q5FW85 PhosphoSite:Q5FW85 PRIDE:Q5FW85
Ensembl:ENSMUST00000051504 GeneID:407800 KEGG:mmu:407800
UCSC:uc007qjl.1 InParanoid:Q5FW85 NextBio:407225 Bgee:Q5FW85
Genevestigator:Q5FW85 Uniprot:Q5FW85
Length = 670
Score = 186 (70.5 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 60/190 (31%), Positives = 95/190 (50%)
Query: 19 PTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNLQ 78
P SC ++ T+ CV+ + P L+ GN++ ++ +E F GL NL+
Sbjct: 288 PRSCSLSYR----TISCVHADFTEIPPITAPEVTNLELVGNSIISIPDEAFN--GLPNLE 341
Query: 79 KIYLSRCRI--SVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIK 136
++ LSR I S I KAF+ L L+ L+ N L +PSD P +L +L ++ N ++
Sbjct: 342 RLDLSRNNITSSGIGPKAFKSLKKLMRLNMDGNNLVHIPSD-LPS--TLEELKINDNNLQ 398
Query: 137 QIKTGAFQPLSYLVTLELSKCGI-EV-IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
I + L+ LVTLEL + E+ ++ AF L+SL +L+L NK I LP
Sbjct: 399 AIDEKSLSDLNQLVTLELEGNNLSEINVDPLAFQSLESLSYLRLGRNKFRIIPQG--LPA 456
Query: 195 GLHGIDLHHN 204
+ L +N
Sbjct: 457 STEELYLENN 466
Score = 60 (26.2 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 15/72 (20%), Positives = 36/72 (50%)
Query: 531 SQCQEWGNVCYNRMQPMQHIVLNNVYNQPADIHLTPEKFMDRDGYP-VDFGLPKVPTHFP 589
+Q +E +C+N + + I+L YN+ + + P +++++ +D K+ H P
Sbjct: 466 NQIEEITEICFNHTRKITMIILR--YNKIEESRIAPLAWINQENLESIDLSYNKL-YHVP 522
Query: 590 ALVPATAYYRTL 601
+ +P + + L
Sbjct: 523 SYLPKSLLHLVL 534
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 200 (75.5 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 73/307 (23%), Positives = 126/307 (41%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
L + N++ +H + + L ++ LS ++ +D ++ L++L L SHN +
Sbjct: 288 LHLSNNSIARIHRKGWSFCQ--KLHELVLSFNNLTRLDEESLAELSSLSVLRLSHNSISH 345
Query: 114 VPSDTFPDYPSLMKLTLSGNPIK---QIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGL 170
+ F SL L L N I + +GAF L L L L I+ + AF GL
Sbjct: 346 IAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGL 405
Query: 171 DSLEWLKLDNNKITTIS-GSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAID 229
+ LE L L N I ++ + + L + + + + CDC L L WL +
Sbjct: 406 EGLEHLNLGGNAIRSVQFDAFVKMKNLKELHISSDSFLCDCQLKWLPPWLIGRMLQAFVT 465
Query: 230 PICSVPPRLSSVTIKQLSIDELACE----PQITPSTFYLEIQEGKNVSLLCKVSAIPEAK 285
C+ P L +I + + C+ PQI GK++ C ++ +
Sbjct: 466 ATCAHPESLKGQSIFSVPPESFVCDDFLKPQIITQPETTMAMVGKDIRFTCSAASSSSSP 525
Query: 286 IT--WLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELL-IYNSNIDDNGTFVCVAENQ 342
+T W D + N M E+ ++G ++ + +L + G + CV N
Sbjct: 526 MTFAWKKDNEVLTNADM---ENFVHVHAQDGEVMEYTTILHLRQVTFGHEGRYQCVITNH 582
Query: 343 AGSTSSN 349
GST S+
Sbjct: 583 FGSTYSH 589
Score = 157 (60.3 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 51/155 (32%), Positives = 81/155 (52%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLT-NLVDLDFSHNV 110
+VLD + NN+ + N F G ++++ L+ RI ++ AF GL+ +L+ L S N
Sbjct: 142 EVLDLSLNNITEVRNTCFPH-G-PPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNR 199
Query: 111 LQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGL 170
+ +P F P L +L L+ N I+ I+ FQ L+ L L+L + I + D AF GL
Sbjct: 200 ITQLPVRAFK-LPRLTQLDLNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGL 258
Query: 171 DSLEWLKLDNNKITTI-SGSNILPTGLHGIDLHHN 204
+ L L+ N + + SGS T LH + L +N
Sbjct: 259 SKMHVLHLEYNSLVEVNSGSLYGLTALHQLHLSNN 293
Score = 143 (55.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 51/188 (27%), Positives = 86/188 (45%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
C +C C G +++C + L + + T+ L+ + N L + F+ L NL
Sbjct: 41 CAAACTC---AG-DSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFED--LPNL 94
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q++YL+ ++ + S +++V L HN +++V Y SL L LS N I +
Sbjct: 95 QEVYLNNNELTAVPSLGAAS-SHVVSLFLQHNKIRSVEGSQLKAYLSLEVLDLSLNNITE 153
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD-SLEWLKLDNNKITTISGSNILPTGL 196
++ F + L L+ I +E AF GL SL L+L N+IT + L
Sbjct: 154 VRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAFKLPRL 213
Query: 197 HGIDLHHN 204
+DL+ N
Sbjct: 214 TQLDLNRN 221
Score = 142 (55.0 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 43/138 (31%), Positives = 65/138 (47%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
P + L+ GN + TL F + +L + LS+ RI+ + +AF+ L L LD +
Sbjct: 163 PPIKELNLAGNRIGTLELGAFDGLSR-SLLTLRLSKNRITQLPVRAFK-LPRLTQLDLNR 220
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFV 168
N ++ + TF SL L L N I ++ GAF LS + L L + + +
Sbjct: 221 NRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAFWGLSKMHVLHLEYNSLVEVNSGSLY 280
Query: 169 GLDSLEWLKLDNNKITTI 186
GL +L L L NN I I
Sbjct: 281 GLTALHQLHLSNNSIARI 298
Score = 140 (54.3 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
Identities = 49/169 (28%), Positives = 83/169 (49%)
Query: 36 VNKSLITVVEGMD----PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVID 91
+N++ I ++EG+ + +VL NN+ L + F GL + ++L + ++
Sbjct: 218 LNRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGAF--WGLSKMHVLHLEYNSLVEVN 275
Query: 92 SKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVT 151
S + GLT L L S+N + + + L +L LS N + ++ + LS L
Sbjct: 276 SGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSV 335
Query: 152 LELSKCGIEVIEDAAFVGLDSLEWLKLDNNKIT-TISGSNILPTGLHGI 199
L LS I I + AF GL SL L LD+N+I+ TI ++ +GL +
Sbjct: 336 LRLSHNSISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSL 384
Score = 135 (52.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 47/154 (30%), Positives = 73/154 (47%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN Q + N L + + +V+L +L +I ++ + +L LD S
Sbjct: 92 PNLQEVYLNNNELTAVPSLGAASSHVVSL---FLQHNKIRSVEGSQLKAYLSLEVLDLSL 148
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSY-LVTLELSKCGIEVIEDAAF 167
N + V + FP P + +L L+GN I ++ GAF LS L+TL LSK I + AF
Sbjct: 149 NNITEVRNTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAF 208
Query: 168 VGLDSLEWLKLDNNKITTISGSNILPTGLHGIDL 201
L L L L+ N+I I G GL+ +++
Sbjct: 209 K-LPRLTQLDLNRNRIRLIEGLTF--QGLNSLEV 239
Score = 85 (35.0 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 25/101 (24%), Positives = 41/101 (40%)
Query: 255 PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEG 314
P T + + I+ L C + P +I W DG A+ ++ +
Sbjct: 599 PSFTKTPHDITIRTTTMARLECAATGHPNPQIAWQKDG----GTDFPAARERRMHVMPDD 654
Query: 315 TEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
I + IDD G + C A+N AGS S+N T+ ++
Sbjct: 655 -----DVFFITDVKIDDAGVYSCTAQNSAGSISANATLTVL 690
Score = 74 (31.1 bits), Expect = 7.6e-10, Sum P(2) = 7.6e-10
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 266 IQEGKNVSLLCKVSAIPEAKITWLFDGVPIQNESMSASESHAVYSTEEGTEIKKSELLIY 325
+ G+ V+L CK + P +ITW F G + +S +E H + T + L++
Sbjct: 704 VSVGETVALQCKATGNPPPRITW-FKG----DRPLSLTERH--HLTPDN-----QLLVVQ 751
Query: 326 NSNIDDNGTFVCVAENQAGSTSSNYTIRIV 355
N +D G + C N G+ ++ + ++
Sbjct: 752 NVVAEDAGRYTCEMSNTLGTERAHSQLSVL 781
>RGD|628607 [details] [associations]
symbol:Lrit1 "leucine-rich repeat, immunoglobulin-like and
transmembrane domains 1" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IDA] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 RGD:628607
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 GO:GO:0030176
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00700000104028 CTD:26103 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 OrthoDB:EOG42JNR2
EMBL:AB028461 IPI:IPI00215326 RefSeq:NP_647547.2 UniGene:Rn.20309
ProteinModelPortal:Q9JMH2 STRING:Q9JMH2 PhosphoSite:Q9JMH2
PRIDE:Q9JMH2 Ensembl:ENSRNOT00000017773 GeneID:246214
KEGG:rno:246214 UCSC:RGD:628607 InParanoid:Q9JMH2 NextBio:623495
Genevestigator:Q9JMH2 GermOnline:ENSRNOG00000012790 Uniprot:Q9JMH2
Length = 623
Score = 196 (74.1 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 72/296 (24%), Positives = 119/296 (40%)
Query: 2 MYWIFLIATIIKIVSACPTSCICKWK----GGK-QTVECVNKSLITVVEGMDPNTQVLDY 56
M W+ + + S CP+ C C G K +TV C + L + P+T L
Sbjct: 7 MLWLLALGGPHQAWSFCPSQCSCSLHILSDGSKARTVVCSDPDLTLPPASIPPDTCKLRL 66
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
++ + E F+ + L++++L +S + + RGL L +L N L T P
Sbjct: 67 ERTAIRRVPGETFRPLS--RLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLVTFPW 124
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
D P L L L N + + A L L L+LS + + + LD+ W
Sbjct: 125 AALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLPEEL---LDT--WA 179
Query: 177 KLDNNKITTISGSNILPTGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI---CS 233
L + + ++ + L NPW CDC L L L+ + + C
Sbjct: 180 HLKTGPYLSSRRTRLV------LGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCG 233
Query: 234 VPPRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITW 288
P L+ V QL + + C+ P++ P + G V L C + IP +++W
Sbjct: 234 SPRSLAGVAFSQLELRK--CQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSW 287
Score = 173 (66.0 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 71/303 (23%), Positives = 129/303 (42%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
K+ L R I + + FR L+ L L +N L + + L +L L GN +
Sbjct: 63 KLRLERTAIRRVPGETFRPLSRLEQLWLPYNALSELSTLMLRGLRRLRELRLPGNHLVTF 122
Query: 139 KTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLH- 197
A + L L+L + + A L++L +L L NN++ + +L T H
Sbjct: 123 PWAALKDTPQLQLLDLQANRLSTLPPEAVHFLENLTFLDLSNNQLMRLP-EELLDTWAHL 181
Query: 198 --G-----------IDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI---CSVPPRLSSV 241
G + L NPW CDC L L L+ + + C P L+ V
Sbjct: 182 KTGPYLSSRRTRLVLGLQDNPWVCDCRLYDLVHLLDGWASNLIFIEARLRCGSPRSLAGV 241
Query: 242 TIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNES 299
QL + + C+ P++ P + G V L C + IP +++W +G P+ N +
Sbjct: 242 AFSQLELRK--CQSPELRPGVTSIISPLGSTVLLRCGATGIPGPEMSWRRANGRPL-NGT 298
Query: 300 MSASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKEE 359
+ H S++ G+ +L + + + D+G ++C A+N G++ + ++ + +
Sbjct: 299 V-----HQEVSSD-GSSWTLLDLPVVS--LFDSGDYICQAKNFLGASETLISLIVTEPQT 350
Query: 360 NVE 362
+ E
Sbjct: 351 STE 353
>MGI|MGI:88158 [details] [associations]
symbol:Bgn "biglycan" species:10090 "Mus musculus" [GO:0005539
"glycosaminoglycan binding" evidence=IDA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0009986 "cell surface" evidence=ISS] [GO:0019800
"peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0050840 "extracellular
matrix binding" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:88158 GO:GO:0009986 GO:GO:0005578 eggNOG:COG4886
GO:GO:0042383 GO:GO:0001974 GO:GO:0031012 GO:GO:0030133
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013 GO:GO:0050840
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 GO:GO:0044424 CTD:633
KO:K08118 OrthoDB:EOG4868CN ChiTaRS:BGN EMBL:X53928 EMBL:L20276
EMBL:BC005452 EMBL:BC019502 EMBL:Y11758 IPI:IPI00123194 PIR:S20811
RefSeq:NP_031568.2 UniGene:Mm.2608 ProteinModelPortal:P28653
SMR:P28653 IntAct:P28653 STRING:P28653 PhosphoSite:P28653
PaxDb:P28653 PRIDE:P28653 Ensembl:ENSMUST00000033741
Ensembl:ENSMUST00000169489 GeneID:12111 KEGG:mmu:12111
InParanoid:P28653 NextBio:280425 Bgee:P28653 CleanEx:MM_BGN
Genevestigator:P28653 GermOnline:ENSMUSG00000031375 Uniprot:P28653
Length = 369
Score = 191 (72.3 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V+C + L TV + + P+T +LD N++ L + F+ GL +L
Sbjct: 64 CPFGCHCHLR----VVQCSDLGLKTVPKEISPDTTLLDLQNNDISELRKDDFK--GLQHL 117
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPIK 136
+ L +IS I KAF L L L S N L +P P+ PS L++L + N I+
Sbjct: 118 YALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP----PNLPSSLVELRIHDNRIR 173
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEV--IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
++ G F L + +E+ +E E AF GL L +L++ K+T I LP
Sbjct: 174 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKD--LPE 230
Query: 195 GLHGIDLHHN 204
L+ + L HN
Sbjct: 231 TLNELHLDHN 240
>RGD|2207 [details] [associations]
symbol:Bgn "biglycan" species:10116 "Rattus norvegicus" [GO:0001974
"blood vessel remodeling" evidence=IEP] [GO:0005539
"glycosaminoglycan binding" evidence=IEA;ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO] [GO:0009986 "cell surface"
evidence=IEA;ISO] [GO:0019800 "peptide cross-linking via chondroitin
4-sulfate glycosaminoglycan" evidence=IEA;ISO] [GO:0030133 "transport
vesicle" evidence=IEA;ISO] [GO:0031012 "extracellular matrix"
evidence=ISO] [GO:0042383 "sarcolemma" evidence=IEA;ISO] [GO:0050840
"extracellular matrix binding" evidence=IEA;ISO] InterPro:IPR001611
PROSITE:PS51450 RGD:2207 GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383
GO:GO:0001974 GO:GO:0030133 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0050840 GeneTree:ENSGT00700000104006
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 GO:GO:0005539 GO:GO:0019800 CTD:633 KO:K08118
OMA:IQFGNYK OrthoDB:EOG4868CN EMBL:U17834 EMBL:BC072480
IPI:IPI00191090 PIR:PT0077 PIR:S32793 RefSeq:NP_058783.1
UniGene:Rn.783 ProteinModelPortal:P47853 SMR:P47853 IntAct:P47853
STRING:P47853 PRIDE:P47853 Ensembl:ENSRNOT00000023920 GeneID:25181
KEGG:rno:25181 InParanoid:P47853 NextBio:605671 Genevestigator:P47853
GermOnline:ENSRNOG00000017440 Uniprot:P47853
Length = 369
Score = 191 (72.3 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 61/190 (32%), Positives = 93/190 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V+C + L TV + + P+T +LD N++ L + F+ GL +L
Sbjct: 64 CPFGCHCHLR----VVQCSDLGLKTVPKEISPDTTLLDLQNNDISELRKDDFK--GLQHL 117
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPIK 136
+ L +IS I KAF L L L S N L +P P+ PS L++L + N I+
Sbjct: 118 YALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP----PNLPSSLVELRIHDNRIR 173
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEV--IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
++ G F L + +E+ +E E AF GL L +L++ K+T I LP
Sbjct: 174 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKD--LPE 230
Query: 195 GLHGIDLHHN 204
L+ + L HN
Sbjct: 231 TLNELHLDHN 240
>UNIPROTKB|A6NLG9 [details] [associations]
symbol:BGN "Biglycan" species:9606 "Homo sapiens"
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0044424 "intracellular
part" evidence=IEA] [GO:0050840 "extracellular matrix binding"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0042383
GO:GO:0001974 GO:GO:0031012 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0050840 HOGENOM:HOG000261690 HOVERGEN:HBG016052
InterPro:IPR016352 PIRSF:PIRSF002490 EMBL:U82695 GO:GO:0005539
GO:GO:0019800 GO:GO:0044424 UniGene:Hs.821 HGNC:HGNC:1044
ChiTaRS:BGN EMBL:AK094059 IPI:IPI00643384 SMR:A6NLG9 STRING:A6NLG9
Ensembl:ENST00000370204 Uniprot:A6NLG9
Length = 307
Score = 187 (70.9 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V+C + L +V + + P+T +LD N++ L + F+ GL +L
Sbjct: 2 CPFGCHCHLR----VVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDFK--GLQHL 55
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPIK 136
+ L +IS I KAF L L L S N L +P P+ PS L++L + N I+
Sbjct: 56 YALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP----PNLPSSLVELRIHDNRIR 111
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEV--IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
++ G F L + +E+ +E E AF GL L +L++ K+T I LP
Sbjct: 112 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKD--LPE 168
Query: 195 GLHGIDLHHN 204
L+ + L HN
Sbjct: 169 TLNELHLDHN 178
>MGI|MGI:2141485 [details] [associations]
symbol:Lrtm2 "leucine-rich repeats and transmembrane domains
2" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:2141485
GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 GeneTree:ENSGT00700000104083 HOGENOM:HOG000290674
CTD:654429 eggNOG:NOG248110 HOVERGEN:HBG081938 OMA:GEHEDQK
OrthoDB:EOG4C5CKK EMBL:AK039006 EMBL:AK045494 EMBL:BC058944
IPI:IPI00221765 RefSeq:NP_001165678.1 RefSeq:NP_766080.1
UniGene:Mm.121498 ProteinModelPortal:Q8BGX3 SMR:Q8BGX3
PhosphoSite:Q8BGX3 PaxDb:Q8BGX3 PRIDE:Q8BGX3
Ensembl:ENSMUST00000068351 Ensembl:ENSMUST00000112756
Ensembl:ENSMUST00000168793 GeneID:211187 KEGG:mmu:211187
UCSC:uc009dmb.2 InParanoid:Q8BGX3 NextBio:373160 Bgee:Q8BGX3
CleanEx:MM_LRTM2 Genevestigator:Q8BGX3
GermOnline:ENSMUSG00000055003 Uniprot:Q8BGX3
Length = 370
Score = 190 (71.9 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 51/175 (29%), Positives = 84/175 (48%)
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
Q + L ++S + S AF L+NL LD S+N L +P F D +L +L L N I+
Sbjct: 71 QSLLLLNNKLSALPSWAFANLSNLQRLDLSNNFLDQLPRSIFEDLVNLTELQLRNNSIRT 130
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP-TGL 196
+ Q L L+LS G+ + F GL +L L L +N++ ++ P L
Sbjct: 131 LDRDLLQHSPLLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQSLDRLTFEPLASL 190
Query: 197 HGIDLHHNPWTCDCLLIGLRRWLE-STKTPMAIDPI-CSVPPRLSSVTIKQLSID 249
+ + NPW CDC L + WLE + +D + C++P L ++ + ++
Sbjct: 191 QLLQVGDNPWECDCNLREFKHWLEWFSYRGGRLDQLACTLPKELRGKDMRAVPME 245
Score = 186 (70.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 54/178 (30%), Positives = 84/178 (47%)
Query: 4 WIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKT 63
WI L A ++++ ACP SC C + + V+C L TV + TQ L N L
Sbjct: 27 WIALCA--VEVIPACPFSCTCDSRSLE--VDCSGLGLTTVPPDVPAATQSLLLLNNKLSA 82
Query: 64 LHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYP 123
L + F + NLQ++ LS + + F L NL +L +N ++T+ D P
Sbjct: 83 LPSWAFANLS--NLQRLDLSNNFLDQLPRSIFEDLVNLTELQLRNNSIRTLDRDLLQHSP 140
Query: 124 SLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNN 181
L L LS N + Q+ G F L L +L L ++ ++ F L SL+ L++ +N
Sbjct: 141 LLRHLDLSINGLAQLPPGLFDGLLALRSLSLRSNRLQSLDRLTFEPLASLQLLQVGDN 198
>ZFIN|ZDB-GENE-010102-1 [details] [associations]
symbol:dcn "decorin" species:7955 "Danio rerio"
[GO:0005515 "protein binding" evidence=IPI] [GO:0050654
"chondroitin sulfate proteoglycan metabolic process" evidence=IDA]
[GO:0060028 "convergent extension involved in axis elongation"
evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
ZFIN:ZDB-GENE-010102-1 InterPro:IPR003591 SMART:SM00369
GO:GO:0051216 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HOVERGEN:HBG016052 InterPro:IPR016352 PIRSF:PIRSF002490
GO:GO:0060028 HSSP:Q9BZR6 CTD:1634 KO:K04660 EMBL:BC044206
IPI:IPI00480913 RefSeq:NP_571772.1 UniGene:Dr.76351
ProteinModelPortal:Q803T1 SMR:Q803T1 STRING:Q803T1 PRIDE:Q803T1
GeneID:64698 KEGG:dre:64698 InParanoid:Q803T1 NextBio:20901994
ArrayExpress:Q803T1 Bgee:Q803T1 GO:GO:0050654 Uniprot:Q803T1
Length = 373
Score = 190 (71.9 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 56/195 (28%), Positives = 97/195 (49%)
Query: 15 VSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGL 74
V CP C C + +C + L TV E + +T +LD N + + F+ GL
Sbjct: 63 VPFCPFRCQCHLR----VAQCSDLGLKTVPEKIPLDTTLLDLQNNKITEIKENDFK--GL 116
Query: 75 VNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNP 134
LQ + L +I++I +KAF L NL L S N+L+ VP++ P SL +L + N
Sbjct: 117 KGLQTLILVNNKITIIHAKAFSSLINLERLYLSKNLLKEVPAN-IPK--SLQELRIHENQ 173
Query: 135 IKQIKTGAFQPLSYLVTLELSKCGIEV--IEDAAFVGLDSLEWLKLDNNKITTISGSNIL 192
I +IK +F ++ ++ +EL + +++ AF L + ++++ + +T+I L
Sbjct: 174 INKIKKSSFAGMANVIVMELGSNPLSSSGVDNGAFADLKRVSYIRIADTNLTSIPKG--L 231
Query: 193 PTGLHGIDLHHNPWT 207
P+ L + L N T
Sbjct: 232 PSSLFELHLDGNKIT 246
>UNIPROTKB|Q7L0X0 [details] [associations]
symbol:TRIL "TLR4 interactor with leucine rich repeats"
species:9606 "Homo sapiens" [GO:0006954 "inflammatory response"
evidence=IEA] [GO:0045087 "innate immune response" evidence=IEA]
[GO:0002718 "regulation of cytokine production involved in immune
response" evidence=IDA] [GO:0001530 "lipopolysaccharide binding"
evidence=IDA] [GO:0046696 "lipopolysaccharide receptor complex"
evidence=IDA] [GO:0034142 "toll-like receptor 4 signaling pathway"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:CH471073 GO:GO:0006954 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0045087 EMBL:CH236948
InterPro:IPR000372 SMART:SM00013 GO:GO:0034142 GO:GO:0046696
GO:GO:0001530 HSSP:Q9BZR6 EMBL:AC005013 Pfam:PF01463 EMBL:AB014544
EMBL:BC036337 IPI:IPI00006556 RefSeq:NP_055632.2 UniGene:Hs.21572
ProteinModelPortal:Q7L0X0 SMR:Q7L0X0 IntAct:Q7L0X0 DMDM:311033514
PRIDE:Q7L0X0 GeneID:9865 KEGG:hsa:9865 UCSC:uc003szt.3 CTD:9865
GeneCards:GC07M028992 HGNC:HGNC:22200 MIM:613356 neXtProt:NX_Q7L0X0
HOVERGEN:HBG066060 GenomeRNAi:9865 NextBio:37186
Genevestigator:Q7L0X0 GO:GO:0002718 Uniprot:Q7L0X0
Length = 811
Score = 196 (74.1 bits), Expect = 8.8e-12, P = 8.8e-12
Identities = 55/182 (30%), Positives = 83/182 (45%)
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L +L + LS + + + F+ L L L N L + + F +L +L L GN
Sbjct: 228 LRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGN 287
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILP 193
+ Q+ T +PL L L+LS + + A F L L L L NN ++ +SG
Sbjct: 288 RLSQLPTALLEPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAA 347
Query: 194 T-GLHGIDLHHNPWTCDCLLIGLRRWL---ESTKTPMAIDPICSVPPRLSSVTIKQLSID 249
+ L+ +DL N WTCDC L GL+RW+ S + + C PP L + L
Sbjct: 348 SPALYRLDLDGNGWTCDCRLRGLKRWMGDWHSQGRLLTVFVQCRHPPALRGKYLDYLDDQ 407
Query: 250 EL 251
+L
Sbjct: 408 QL 409
Score = 166 (63.5 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 52/177 (29%), Positives = 85/177 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMD-PNTQ-VLDYT--GNNLKTLHNEKFQKMG 73
CP C C+ Q + C N+ L V + P+ VL Y+ GN + + F ++G
Sbjct: 27 CPERCDCQHP---QHLLCTNRGLRVVPKTSSLPSPHDVLTYSLGGNFITNITAFDFHRLG 83
Query: 74 LVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGN 133
L+++ L +I + K F L+ L +L +N+LQ + T L L +GN
Sbjct: 84 --QLRRLDLQYNQIRSLHPKTFEKLSRLEELYLGNNLLQALAPGTLAPLRKLRILYANGN 141
Query: 134 PIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSN 190
I ++ G+F+ L LV L L + + DA F L +L +L L++N+I + G N
Sbjct: 142 EISRLSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFL-GKN 197
Score = 133 (51.9 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 51/164 (31%), Positives = 78/164 (47%)
Query: 45 EGMDPNTQV-LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVD 103
EG++ ++ LD GN L L + F +G NL ++L RI + AF L L
Sbjct: 152 EGLESLVKLRLD--GNALGALPDAVFAPLG--NLLYLHLESNRIRFLGKNAFAQLGKLRF 207
Query: 104 LDFSHNVLQTV--PSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEV 161
L+ S N LQ + TF SL L LS N ++ + FQ L L L L +
Sbjct: 208 LNLSANELQPSLRHAATFAPLRSLSSLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTH 267
Query: 162 IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT-GLHGIDLHHN 204
+ AF GL++L L+L+ N+++ + + + P L +DL N
Sbjct: 268 LAPEAFWGLEALRELRLEGNRLSQLPTALLEPLHSLEALDLSGN 311
Score = 128 (50.1 bits), Expect = 0.00020, P = 0.00020
Identities = 36/130 (27%), Positives = 59/130 (45%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD N +++LH + F+K+ L+++YL + + L L L + N +
Sbjct: 88 LDLQYNQIRSLHPKTFEKLS--RLEELYLGNNLLQALAPGTLAPLRKLRILYANGNEISR 145
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ +F SL+KL L GN + + F PL L+ L L I + AF L L
Sbjct: 146 LSRGSFEGLESLVKLRLDGNALGALPDAVFAPLGNLLYLHLESNRIRFLGKNAFAQLGKL 205
Query: 174 EWLKLDNNKI 183
+L L N++
Sbjct: 206 RFLNLSANEL 215
>RGD|631413 [details] [associations]
symbol:Amigo3 "adhesion molecule with Ig like domain 3"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=IPI] [GO:0007399 "nervous system development"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=NAS]
InterPro:IPR007110 PROSITE:PS50835 RGD:631413 GO:GO:0016021
GO:GO:0007399 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003598 SMART:SM00408 InterPro:IPR003591 SMART:SM00369
GO:GO:0007157 InterPro:IPR000372 SMART:SM00013 HOVERGEN:HBG080231
CTD:386724 OMA:VCLATGP EMBL:AY237731 IPI:IPI00201199
RefSeq:NP_835280.1 UniGene:Rn.203829 ProteinModelPortal:Q80ZD5
PRIDE:Q80ZD5 GeneID:316003 KEGG:rno:316003 UCSC:RGD:631413
InParanoid:Q80ZD5 NextBio:670247 Genevestigator:Q80ZD5
GermOnline:ENSRNOG00000019739 Uniprot:Q80ZD5
Length = 508
Score = 192 (72.6 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 92/345 (26%), Positives = 139/345 (40%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C+C + C + L + + LD + N LK LH + L
Sbjct: 34 CPNKCVC----AADVLSCAGRGLQDLPAALPATAAELDLSHNALKRLHPGWLAPLS--RL 87
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ +YL ++ V+ F + L LD S N+L+ + + L KL L N +
Sbjct: 88 RALYLGYNKLDVLGRGVFTNASGLRILDLSSNLLRRLRTYDLDGLEELEKLLLFNNRLMH 147
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAF-----VGLDSLEWLKLDNNKITTISGSNI- 191
+ AFQ LS L L LS C + +F +GL L L L +N + +S +
Sbjct: 148 LDLDAFQGLSMLSHLYLS-CN--ELSSFSFNHLHGLGLTRLRTLDLSSNWLGHVSVPELA 204
Query: 192 -LPTGLHG-IDLHHNPWTCDCLLIGL-RRW----------LESTKTPMAIDPICSVPPRL 238
LPT L + LH+NP CDC L L RRW E T +A + R
Sbjct: 205 ALPTFLKNRLYLHNNPLPCDCSLYHLLRRWHQRGLSALHDFEREYTCLAFK-VAESRVRF 263
Query: 239 --SSVTIKQLSIDELACEPQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWLFDGVPIQ 296
S K S+ A P + L G+++ L C + +P A++ W V +
Sbjct: 264 FEHSRVFKNCSV---AAAPGLELPEEELHTHVGQSLRLFCNTT-VPAARVAW----VSPK 315
Query: 297 NESMSA--SESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVA 339
NE + A S+ ++ +G+ L I G FVC+A
Sbjct: 316 NELLVAPGSQDGSIAVLADGS------LAIGRVQEQHAGLFVCLA 354
>MGI|MGI:2389180 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=ISS] [GO:0030054 "cell junction" evidence=IEA]
[GO:0032281 "alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic
acid selective glutamate receptor complex" evidence=IDA]
[GO:0045202 "synapse" evidence=IEA] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2389180 GO:GO:0030054 GO:GO:0045211 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 GO:GO:0032281 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00700000104056 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:AY182031 EMBL:BC037216
EMBL:AK032470 IPI:IPI00170371 IPI:IPI00269563 RefSeq:NP_848846.3
UniGene:Mm.473274 UniGene:Mm.483425 ProteinModelPortal:Q80XG9
SMR:Q80XG9 STRING:Q80XG9 PRIDE:Q80XG9 Ensembl:ENSMUST00000074662
Ensembl:ENSMUST00000126005 Ensembl:ENSMUST00000126399
Ensembl:ENSMUST00000133918 Ensembl:ENSMUST00000147663 GeneID:243499
KEGG:mmu:243499 UCSC:uc009ckf.2 UCSC:uc012enp.1 InParanoid:Q80XG9
NextBio:385801 Bgee:Q80XG9 CleanEx:MM_LRRTM4 Genevestigator:Q80XG9
GermOnline:ENSMUSG00000052581 Uniprot:Q80XG9
Length = 590
Score = 193 (73.0 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 73/267 (27%), Positives = 112/267 (41%)
Query: 53 VLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
+L N+LKT+ FQ NL + L R+ + AF GL L +L HN
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCR--NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ FP +L + L N I+ + G S L TL+LS I+ IE F L +
Sbjct: 219 KINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN 278
Query: 173 LEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L+ L LD+NK+T +S + L I L N W C + L WL++ K I
Sbjct: 279 LQKLNLDSNKLTNVSQETVNAWISLISITLSGNMWECSRSICPLFYWLKNFKGNKESTMI 338
Query: 232 CSVPPRLSSVTIKQ-LSIDELACEPQITPST-FYLEIQEGKNVSLLCKVSAIPEAKITWL 289
C+ P + + + + + Q+ + +L Q + K IP+ I +
Sbjct: 339 CAGPKHIQGEKVSDAVETYNICSDVQVVNTERSHLAPQTPQ------KPPFIPKPTI-FK 391
Query: 290 FDGVPIQNESMSASESHAVYSTEEGTE 316
D VP E++S S + T+ E
Sbjct: 392 PDAVPATLEAVSPSPGFQIPGTDHEYE 418
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 54/208 (25%), Positives = 100/208 (48%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+++ L+ + ACP +C C GK V C + + + E + +Q L N+
Sbjct: 17 VLFPTLLLVMLTGAQRACPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
++ L + +F GL L +YL IS +D AF+G+ L +L S N + + + TF
Sbjct: 73 IQKLKSNQFA--GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFH 130
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
P+L L LS N ++ +++ F+ L L+ L L ++ + F +L++L L
Sbjct: 131 PVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 181 NKITTISGSNILPT-GLHGIDLHHNPWT 207
N++ ++S + L + L HN ++
Sbjct: 191 NRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Score = 167 (63.8 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 66/228 (28%), Positives = 102/228 (44%)
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
+ N + LHN+ F + NL+ + LS ++ + S+ F+GL L+ L N L+TVP
Sbjct: 117 SSNKITYLHNKTFHPVP--NLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPI 174
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
F D +L L L N ++ + AF L L L L I A F L +L +
Sbjct: 175 RVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSI 234
Query: 177 KLDNNKITTIS-GSNILPTGLHGIDLHHN------PWTCDCLLIGLRRWLESTKTPMAID 229
L N+I ++S G + LH +DL N P T CL + L+S K
Sbjct: 235 YLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQ 294
Query: 230 PICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEG-KNVSLLC 276
+ L S+T LS + C I P ++L+ +G K +++C
Sbjct: 295 ETVNAWISLISIT---LSGNMWECSRSICPLFYWLKNFKGNKESTMIC 339
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD+ N + ++ + FQ G+ L+++ LS +I+ + +K F + NL +LD S+N LQT
Sbjct: 92 LDH--NYISSVDEDAFQ--GIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ S+ F L+ L L N +K + FQ L L+L + + AF GL L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 174 EWLKLDNNKITTIS 187
+ L L++N+ + I+
Sbjct: 208 KELHLEHNQFSKIN 221
>UNIPROTKB|Q9P2V4 [details] [associations]
symbol:LRIT1 "Leucine-rich repeat, immunoglobulin-like
domain and transmembrane domain-containing protein 1" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030176 "integral
to endoplasmic reticulum membrane" evidence=ISS] InterPro:IPR001611
InterPro:IPR003961 InterPro:IPR007110 Pfam:PF00041 PROSITE:PS50835
PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060 Gene3D:2.60.40.10
InterPro:IPR013783 SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
GO:GO:0030176 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 EMBL:AB031547 EMBL:AL080175 IPI:IPI00024059
PIR:T12497 RefSeq:NP_056428.1 UniGene:Hs.226000
ProteinModelPortal:Q9P2V4 SMR:Q9P2V4 PhosphoSite:Q9P2V4
DMDM:37081671 PaxDb:Q9P2V4 PRIDE:Q9P2V4 DNASU:26103
Ensembl:ENST00000372105 GeneID:26103 KEGG:hsa:26103 UCSC:uc001kcz.1
CTD:26103 GeneCards:GC10M085982 HGNC:HGNC:23404 HPA:HPA014296
neXtProt:NX_Q9P2V4 PharmGKB:PA162394331 eggNOG:NOG310852
HOGENOM:HOG000063714 HOVERGEN:HBG108105 InParanoid:Q9P2V4
OMA:RRINEYF OrthoDB:EOG42JNR2 PhylomeDB:Q9P2V4 GenomeRNAi:26103
NextBio:48099 Bgee:Q9P2V4 CleanEx:HS_LRIT1 Genevestigator:Q9P2V4
GermOnline:ENSG00000148602 Uniprot:Q9P2V4
Length = 623
Score = 202 (76.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 73/299 (24%), Positives = 121/299 (40%)
Query: 2 MYWIFLIATIIKIVSACPTSCICKWK----GGK-QTVECVNKSLITVVEGMDPNTQVLDY 56
M W+ +A + CP+ C C G K +TV C + + + P+T L
Sbjct: 7 MLWLLALAWPPQARGFCPSQCSCSLHIMGDGSKARTVVCNDPDMTLPPASIPPDTSRLRL 66
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
++ + E F+ +G L++++L +S +++ RGL L +L N L P
Sbjct: 67 ERTAIRRVPGEAFRPLG--RLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLAAFPW 124
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
D P L L L N + + A + L L L+LS + + V W
Sbjct: 125 AALRDAPKLRLLDLQANRLSAVPAEAARFLENLTFLDLSSNQLMRLPQELIVS-----WA 179
Query: 177 KLDNNKITTISGSNILPTGLHG---IDLHHNPWTCDCLLIGLRRWLESTKTPMAI---DP 230
L+ + I P G H + L NPW CDC L L L+ +A +
Sbjct: 180 HLE---------TGIFPPGHHPRRVLGLQDNPWACDCRLYDLVHLLDGWAPNLAFIETEL 230
Query: 231 ICSVPPRLSSVTIKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITW 288
C+ P L+ V QL + + C+ P++ P + G L C + +P +++W
Sbjct: 231 RCASPRSLAGVAFSQLELRK--CQGPELHPGVASIRSLLGGTALLRCGATGVPGPEMSW 287
Score = 167 (63.8 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 75/298 (25%), Positives = 131/298 (43%)
Query: 79 KIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQI 138
++ L R I + +AFR L L L +N L + + L +L L GN +
Sbjct: 63 RLRLERTAIRRVPGEAFRPLGRLEQLWLPYNALSELNALMLRGLRRLRELRLPGNRLAAF 122
Query: 139 KTGAFQ--PLSYLVTLE---LSKCGIEV---IEDAAFVGLDSLEWLKLDNNKITTISG-- 188
A + P L+ L+ LS E +E+ F+ L S + ++L I + +
Sbjct: 123 PWAALRDAPKLRLLDLQANRLSAVPAEAARFLENLTFLDLSSNQLMRLPQELIVSWAHLE 182
Query: 189 SNILPTGLHG---IDLHHNPWTCDCLLIGLRRWLESTKTPMAI---DPICSVPPRLSSVT 242
+ I P G H + L NPW CDC L L L+ +A + C+ P L+ V
Sbjct: 183 TGIFPPGHHPRRVLGLQDNPWACDCRLYDLVHLLDGWAPNLAFIETELRCASPRSLAGVA 242
Query: 243 IKQLSIDELACE-PQITPSTFYLEIQEGKNVSLLCKVSAIPEAKITWL-FDGVPIQNESM 300
QL + + C+ P++ P + G L C + +P +++W +G P+ N ++
Sbjct: 243 FSQLELRK--CQGPELHPGVASIRSLLGGTALLRCGATGVPGPEMSWRRANGRPL-NGTV 299
Query: 301 SASESHAVYSTEEGTEIKKSELLIYNSNIDDNGTFVCVAENQAGSTSSNYTIRIVLKE 358
H S++ GT L S++D +G ++C A+N G++ + I +++ E
Sbjct: 300 -----HQEVSSD-GTSWTLLGLPAV-SHLD-SGDYICQAKNFLGASET--VISLIVTE 347
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 12/49 (24%), Positives = 22/49 (44%)
Query: 412 KNVNGSNENVVKNL-RESPKYTSVNATSATCMDKVNGGYIIADGHNDMM 459
KN G++E V+ + E P T + + + GG A +N ++
Sbjct: 331 KNFLGASETVISLIVTEPPTSTEHSGSPGALWARTGGGGEAAAYNNKLV 379
>MGI|MGI:3045213 [details] [associations]
symbol:Tlr13 "toll-like receptor 13" species:10090 "Mus
musculus" [GO:0002755 "MyD88-dependent toll-like receptor signaling
pathway" evidence=IGI] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0019843 "rRNA binding"
evidence=IDA] [GO:0034178 "toll-like receptor 13 signaling pathway"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0043408 "regulation of MAPK cascade"
evidence=IGI] [GO:0045087 "innate immune response" evidence=IDA]
Pfam:PF00560 InterPro:IPR000157 InterPro:IPR001611
InterPro:IPR027196 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 MGI:MGI:3045213 GO:GO:0016021 GO:GO:0042803
GO:GO:0005768 GO:GO:0006954 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 GO:GO:0045087 GO:GO:0010008 GO:GO:0009615
GO:GO:0019843 GO:GO:0002755 EMBL:AL672288 GO:GO:0043408
EMBL:CH466564 SUPFAM:SSF52200 EMBL:AY510706 EMBL:AK170044
EMBL:BC117913 EMBL:BC117914 IPI:IPI00342691 RefSeq:NP_991389.1
UniGene:Mm.336203 ProteinModelPortal:Q6R5N8 SMR:Q6R5N8
STRING:Q6R5N8 PhosphoSite:Q6R5N8 PRIDE:Q6R5N8
Ensembl:ENSMUST00000040065 GeneID:279572 KEGG:mmu:279572 CTD:279572
GeneTree:ENSGT00680000099674 HOGENOM:HOG000203220
HOVERGEN:HBG094977 InParanoid:Q6R5N8 OrthoDB:EOG4XGZZS
NextBio:393989 Bgee:Q6R5N8 CleanEx:MM_TLR13 Genevestigator:Q6R5N8
GermOnline:ENSMUSG00000033777 GO:GO:0034178 PANTHER:PTHR24367:SF26
Uniprot:Q6R5N8
Length = 991
Score = 196 (74.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 53/153 (34%), Positives = 80/153 (52%)
Query: 54 LDYTGNN-LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
LD N+ L L++ +F L +LQK+ L++C++S I+++ + L NL LD SHN +
Sbjct: 376 LDLGQNSDLIYLNDSEFN--ALPSLQKLNLNKCQLSFINNRTWSSLQNLTSLDLSHNKFK 433
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ P F L L+LS NPI ++ AF L L L L+ C I I+ +F +
Sbjct: 434 SFPDFAFSPLKHLEFLSLSRNPITELNNLAFSGLFALKELNLAACWIVTIDRYSFTQFPN 493
Query: 173 LEWLKLDNNKITTISGSNILPTG-LHGIDLHHN 204
LE L L +N I T++ P L + L HN
Sbjct: 494 LEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHN 526
Score = 155 (59.6 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 47/140 (33%), Positives = 69/140 (49%)
Query: 49 PNTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSH 108
PN +VLD NN++TL++ F+ L LQ + LS + +++ +F GLTNL LD +
Sbjct: 492 PNLEVLDLGDNNIRTLNHGTFRP--LKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMY 549
Query: 109 NVLQTVPSDTFPDYPSLMKLTLSGNPI--KQIKTGAFQPLSYL-----VTLELSKCGIEV 161
N L F L+ L L N I + +T + P L + LE + GI+V
Sbjct: 550 NSLSYFHEHLFSGLEKLLILKLGFNKITYETTRTLQYPPFIKLKSLKQLNLEGQRHGIQV 609
Query: 162 IEDAAFVGLDSLEWLKLDNN 181
+ F GL SL+ L L N
Sbjct: 610 VPSNFFQGLGSLQELLLGKN 629
Score = 151 (58.2 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 44/133 (33%), Positives = 66/133 (49%)
Query: 52 QVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVL 111
+ L + N + L+N F GL L+++ L+ C I ID +F NL LD N +
Sbjct: 447 EFLSLSRNPITELNNLAFS--GLFALKELNLAACWIVTIDRYSFTQFPNLEVLDLGDNNI 504
Query: 112 QTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLD 171
+T+ TF L L LS N +K ++ +F L+ L +L+L + + F GL+
Sbjct: 505 RTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSGLTNLRSLDLMYNSLSYFHEHLFSGLE 564
Query: 172 SLEWLKLDNNKIT 184
L LKL NKIT
Sbjct: 565 KLLILKLGFNKIT 577
Score = 146 (56.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 42/135 (31%), Positives = 72/135 (53%)
Query: 50 NTQVLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHN 109
N LD + N K+ + F L +L+ + LSR I+ +++ AF GL L +L+ +
Sbjct: 421 NLTSLDLSHNKFKSFPDFAFSP--LKHLEFLSLSRNPITELNNLAFSGLFALKELNLAAC 478
Query: 110 VLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVG 169
+ T+ +F +P+L L L N I+ + G F+PL L +L LS ++++E +F G
Sbjct: 479 WIVTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQSLILSHNCLKILEPNSFSG 538
Query: 170 LDSLEWLKLDNNKIT 184
L +L L L N ++
Sbjct: 539 LTNLRSLDLMYNSLS 553
Score = 145 (56.1 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 57/163 (34%), Positives = 76/163 (46%)
Query: 33 VECVNKSLITVVEGMD--PN-TQVLDYTGNNLKTLHNEKFQKMG-LVNLQKIYLSRCRIS 88
V C+ K + + E + P T L+ T N ++ L F + LV+L+ + S I
Sbjct: 84 VLCIRKKITNLTEAISDIPRYTTHLNLTHNEIQVLPPWSFTNLSALVDLRLEWNS---IW 140
Query: 89 VIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSY 148
ID AFRGL NL L+ N +Q+V +++F SL L LS N I I AF PL
Sbjct: 141 KIDEGAFRGLENLTLLNLVENKIQSV-NNSFEGLSSLKTLLLSHNQITHIHKDAFTPLIK 199
Query: 149 LVTLELSKCGIEVIEDA--AFVGLDSLEWLKLDNNKITTISGS 189
L L LS+ I A L LE L L NN I + S
Sbjct: 200 LKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMYLDHS 242
>RGD|1560707 [details] [associations]
symbol:Lrrtm4 "leucine rich repeat transmembrane neuronal 4"
species:10116 "Rattus norvegicus" [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0032281
"alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective
glutamate receptor complex" evidence=ISO] [GO:0045211 "postsynaptic
membrane" evidence=IEA] [GO:0050808 "synapse organization"
evidence=IDA] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
RGD:1560707 GO:GO:0016021 GO:GO:0005886 GO:GO:0030054 GO:GO:0045211
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0050808
InterPro:IPR000372 SMART:SM00013 HOGENOM:HOG000290681
HOVERGEN:HBG052362 CTD:80059 EMBL:BC168219 IPI:IPI00388758
RefSeq:NP_001128218.1 UniGene:Rn.140910 GeneID:500219
KEGG:rno:500219 OrthoDB:EOG4MW85Z NextBio:705440
Genevestigator:B4F7C5 Uniprot:B4F7C5
Length = 590
Score = 192 (72.6 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 58/187 (31%), Positives = 83/187 (44%)
Query: 53 VLDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQ 112
+L N+LKT+ FQ NL + L R+ + AF GL L +L HN
Sbjct: 161 ILHLRSNSLKTVPIRVFQDCR--NLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Query: 113 TVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDS 172
+ FP +L + L N I+ + G S L TL+LS I+ IE F L +
Sbjct: 219 KINFAHFPRLFNLRSIYLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPN 278
Query: 173 LEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDPI 231
L+ L LD+NK+T +S + L I L N W C + L WL++ K I
Sbjct: 279 LQKLNLDSNKLTNVSQETVNAWISLISITLSGNMWECSRSICPLFYWLKNFKGNKESTMI 338
Query: 232 CSVPPRL 238
C+ P +
Sbjct: 339 CAGPKHI 345
Score = 183 (69.5 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 54/208 (25%), Positives = 100/208 (48%)
Query: 1 MMYWIFLIATIIKIVSACPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNN 60
+++ L+ + ACP +C C GK V C + + + E + +Q L N+
Sbjct: 17 VLFPTLLLVMLTGAQRACPKNCRCD---GK-IVYCESHAFADIPENISGGSQGLSLRFNS 72
Query: 61 LKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFP 120
++ L + +F GL L +YL IS +D AF+G+ L +L S N + + + TF
Sbjct: 73 IQKLKSNQFA--GLNQLIWLYLDHNYISSVDEDAFQGIRRLKELILSSNKITYLHNKTFH 130
Query: 121 DYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDN 180
P+L L LS N ++ +++ F+ L L+ L L ++ + F +L++L L
Sbjct: 131 PVPNLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGY 190
Query: 181 NKITTISGSNILPT-GLHGIDLHHNPWT 207
N++ ++S + L + L HN ++
Sbjct: 191 NRLRSLSRNAFAGLLKLKELHLEHNQFS 218
Score = 167 (63.8 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 66/228 (28%), Positives = 102/228 (44%)
Query: 57 TGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPS 116
+ N + LHN+ F + NL+ + LS ++ + S+ F+GL L+ L N L+TVP
Sbjct: 117 SSNKITYLHNKTFHPVP--NLRNLDLSYNKLQTLQSEQFKGLRKLIILHLRSNSLKTVPI 174
Query: 117 DTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWL 176
F D +L L L N ++ + AF L L L L I A F L +L +
Sbjct: 175 RVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKLKELHLEHNQFSKINFAHFPRLFNLRSI 234
Query: 177 KLDNNKITTIS-GSNILPTGLHGIDLHHN------PWTCDCLLIGLRRWLESTKTPMAID 229
L N+I ++S G + LH +DL N P T CL + L+S K
Sbjct: 235 YLQWNRIRSVSQGLTWTWSSLHTLDLSGNDIQAIEPGTFKCLPNLQKLNLDSNKLTNVSQ 294
Query: 230 PICSVPPRLSSVTIKQLSIDELACEPQITPSTFYLEIQEG-KNVSLLC 276
+ L S+T LS + C I P ++L+ +G K +++C
Sbjct: 295 ETVNAWISLISIT---LSGNMWECSRSICPLFYWLKNFKGNKESTMIC 339
Score = 153 (58.9 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD+ N + ++ + FQ G+ L+++ LS +I+ + +K F + NL +LD S+N LQT
Sbjct: 92 LDH--NYISSVDEDAFQ--GIRRLKELILSSNKITYLHNKTFHPVPNLRNLDLSYNKLQT 147
Query: 114 VPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSL 173
+ S+ F L+ L L N +K + FQ L L+L + + AF GL L
Sbjct: 148 LQSEQFKGLRKLIILHLRSNSLKTVPIRVFQDCRNLDFLDLGYNRLRSLSRNAFAGLLKL 207
Query: 174 EWLKLDNNKITTIS 187
+ L L++N+ + I+
Sbjct: 208 KELHLEHNQFSKIN 221
>UNIPROTKB|P21810 [details] [associations]
symbol:BGN "Biglycan" species:9606 "Homo sapiens"
[GO:0001974 "blood vessel remodeling" evidence=IEA] [GO:0005539
"glycosaminoglycan binding" evidence=IEA] [GO:0019800 "peptide
cross-linking via chondroitin 4-sulfate glycosaminoglycan"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA] [GO:0050840
"extracellular matrix binding" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=NAS] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] [GO:0009986 "cell
surface" evidence=IDA] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005796 "Golgi lumen" evidence=TAS] [GO:0005975
"carbohydrate metabolic process" evidence=TAS] [GO:0030203
"glycosaminoglycan metabolic process" evidence=TAS] [GO:0030204
"chondroitin sulfate metabolic process" evidence=TAS] [GO:0030206
"chondroitin sulfate biosynthetic process" evidence=TAS]
[GO:0030207 "chondroitin sulfate catabolic process" evidence=TAS]
[GO:0030208 "dermatan sulfate biosynthetic process" evidence=TAS]
[GO:0043202 "lysosomal lumen" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0030133 "transport
vesicle" evidence=IDA] [GO:0031012 "extracellular matrix"
evidence=ISS;IDA] Reactome:REACT_111217 InterPro:IPR001611
PROSITE:PS51450 Reactome:REACT_116125 GO:GO:0009986 GO:GO:0005975
GO:GO:0005578 eggNOG:COG4886 GO:GO:0042383 GO:GO:0001974
GO:GO:0043202 GO:GO:0005796 GO:GO:0030133 InterPro:IPR000372
Pfam:PF01462 SMART:SM00013 GO:GO:0050840 GO:GO:0030207
HOGENOM:HOG000261690 HOVERGEN:HBG016052 InterPro:IPR016352
PIRSF:PIRSF002490 EMBL:CH471172 EMBL:U82695 GO:GO:0030206
GO:GO:0005201 GO:GO:0030208 GO:GO:0005539 GO:GO:0019800 CTD:633
KO:K08118 OMA:IQFGNYK OrthoDB:EOG4868CN EMBL:J04599 EMBL:M65153
EMBL:M65152 EMBL:BT007323 EMBL:BC002416 EMBL:BC004244 EMBL:U11686
IPI:IPI00010790 PIR:A40757 RefSeq:NP_001702.1 UniGene:Hs.821
ProteinModelPortal:P21810 SMR:P21810 IntAct:P21810 STRING:P21810
PhosphoSite:P21810 DMDM:266762 PaxDb:P21810 PRIDE:P21810 DNASU:633
Ensembl:ENST00000331595 GeneID:633 KEGG:hsa:633 UCSC:uc004fhr.2
GeneCards:GC0XP152762 HGNC:HGNC:1044 HPA:CAB003678 HPA:HPA003157
MIM:301870 neXtProt:NX_P21810 PharmGKB:PA25346 InParanoid:P21810
ChiTaRS:BGN GenomeRNAi:633 NextBio:2558 PMAP-CutDB:P21810
ArrayExpress:P21810 Bgee:P21810 CleanEx:HS_BGN
Genevestigator:P21810 GermOnline:ENSG00000182492 Uniprot:P21810
Length = 368
Score = 187 (70.9 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 60/190 (31%), Positives = 93/190 (48%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C + V+C + L +V + + P+T +LD N++ L + F+ GL +L
Sbjct: 63 CPFGCHCHLR----VVQCSDLGLKSVPKEISPDTTLLDLQNNDISELRKDDFK--GLQHL 116
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPS-LMKLTLSGNPIK 136
+ L +IS I KAF L L L S N L +P P+ PS L++L + N I+
Sbjct: 117 YALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP----PNLPSSLVELRIHDNRIR 172
Query: 137 QIKTGAFQPLSYLVTLELSKCGIEV--IEDAAFVGLDSLEWLKLDNNKITTISGSNILPT 194
++ G F L + +E+ +E E AF GL L +L++ K+T I LP
Sbjct: 173 KVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTGIPKD--LPE 229
Query: 195 GLHGIDLHHN 204
L+ + L HN
Sbjct: 230 TLNELHLDHN 239
>FB|FBgn0023095 [details] [associations]
symbol:caps "capricious" species:7227 "Drosophila
melanogaster" [GO:0007411 "axon guidance" evidence=IMP] [GO:0007424
"open tracheal system development" evidence=IMP] [GO:0016020
"membrane" evidence=NAS] [GO:0007155 "cell adhesion" evidence=NAS]
[GO:0016477 "cell migration" evidence=TAS] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0007156
"homophilic cell adhesion" evidence=IDA] [GO:0035147 "branch
fusion, open tracheal system" evidence=IMP] [GO:0008045 "motor
neuron axon guidance" evidence=IMP] [GO:0042995 "cell projection"
evidence=IDA] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
EMBL:AE014296 GO:GO:0016477 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 GO:GO:0007155 GO:GO:0008045
GO:GO:0042995 GO:GO:0046331 InterPro:IPR000372 SMART:SM00013
GO:GO:0007476 GO:GO:0035147 ChiTaRS:CAPS CTD:828
FlyBase:FBgn0023095 RefSeq:NP_001036604.2 UniGene:Dm.2067
ProteinModelPortal:Q0E8F0 SMR:Q0E8F0 STRING:Q0E8F0 PRIDE:Q0E8F0
GeneID:39493 KEGG:dme:Dmel_CG11282 UCSC:CG11282-RC GenomeRNAi:39493
NextBio:813926 Bgee:Q0E8F0 Uniprot:Q0E8F0
Length = 748
Score = 190 (71.9 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 59/204 (28%), Positives = 96/204 (47%)
Query: 54 LDYTGNNLKTLHNEKFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQT 113
LD G L + + + GLV+L+ + LS R+ I + AF+ L L L+ N +
Sbjct: 245 LDLRGAGLHNISGDALK--GLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEV 302
Query: 114 VPSDTFPDYPSLMKLTLSG-NPIKQIKTGAFQPLSYLVTLELSKCG-IEVIEDAAFVGLD 171
+ S F L L L+G ++++++GAF + L L LS + + A GL
Sbjct: 303 ISSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSNKQLNELSSIALGGLP 362
Query: 172 SLEWLKLDNNKITTISGSNILP-TGLHGIDLHHNPWTCDCLLIGLRRWLESTKTPMAIDP 230
L + L N+++++ ++P L +DL NP+ CDC L+ LR L S P
Sbjct: 363 HLSTVVLKANQLSSLD-EGLVPWADLQTLDLSENPFECDCRLLWLRHLLVSRNASGQYAP 421
Query: 231 -ICSVPPRLSSVTIKQLSIDELAC 253
IC+ P L + + L+ L C
Sbjct: 422 VICAYPTALRDLPLAHLAEPLLGC 445
Score = 160 (61.4 bits), Expect = 3.2e-08, Sum P(2) = 3.2e-08
Identities = 52/182 (28%), Positives = 79/182 (43%)
Query: 18 CPTSCICKWKGGKQTVECVNKSLITVVEGMDPNTQVLDYTGNNLKTLHNEKFQKMGLVNL 77
CP C C V C +L + ++P Q L N LKT+ + L
Sbjct: 43 CPNGCECD--DDTLMVNCGEGTLDVLPIALNPAIQRLVIKNNKLKTIDSSM---QFYAQL 97
Query: 78 QKIYLSRCRISVIDSKAFRGLTNLVDLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQ 137
+ LS + I ++F L +L HN + V + TF ++ L L GN I +
Sbjct: 98 TFLDLSFNDMLTIPERSFAYHAKLQELHLDHNKIGQVSNKTFLGLSTISVLNLRGNLIAE 157
Query: 138 IKTGAFQPLSYLVTLELSKCGIEVIEDAAFVGLDSLEWLKLDNNKITTISGSNILPTGLH 197
++ F P+ L L L + I I+ A GLD+L L LD+N +TT+ G + LH
Sbjct: 158 LEYRTFSPMVKLAELNLGQNRISHIDPHALDGLDNLRVLYLDDNTLTTVPGE-LTFQALH 216
Query: 198 GI 199
+
Sbjct: 217 SL 218
Score = 151 (58.2 bits), Expect = 3.0e-07, Sum P(2) = 3.0e-07
Identities = 54/164 (32%), Positives = 74/164 (45%)
Query: 44 VEGMDPNTQVLDYTGNNLKTLHNE-KFQKMGLVNLQKIYLSRCRISVIDSKAFRGLTNLV 102
++G+D N +VL N L T+ E FQ L +L ++YL I AF+ L L
Sbjct: 187 LDGLD-NLRVLYLDDNTLTTVPGELTFQ--ALHSLAELYLGTNSFMTIPGGAFQDLKGLT 243
Query: 103 DLDFSHNVLQTVPSDTFPDYPSLMKLTLSGNPIKQIKTGAFQPLSYLVTLELSKCGIEVI 162
LD L + D SL L LS N + I T AFQ L L L + + EVI
Sbjct: 244 RLDLRGAGLHNISGDALKGLVSLRFLDLSDNRLPAIPTAAFQRLGRLEQLNIGQNDFEVI 303
Query: 163 EDAAFVGLDSLEWLKLDN-NKITTI-SGSNILPTGLHGIDLHHN 204
AF GL L L+L ++ + SG+ T L ++L N
Sbjct: 304 SSGAFSGLRELRHLELTGAQRLRRVESGAFSGNTNLEHLNLSSN 347
Score = 51 (23.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 16/52 (30%), Positives = 20/52 (38%)
Query: 541 YNRMQPMQHIV-LNNVYNQPADIHLTPEKFMDRDGY--PVDFGLPKVPTHFP 589
+N Q H VY +P D P + Y P+D LP PT P
Sbjct: 631 FNHNQNQSHNQHYGGVYAKPCDAMSEPGYIHNNSHYSLPLDHDLPPSPTPTP 682
WARNING: HSPs involving 494 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.131 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 767 695 0.00081 121 3 11 23 0.44 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 744
No. of states in DFA: 622 (66 KB)
Total size of DFA: 380 KB (2187 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 65.68u 0.08s 65.76t Elapsed: 00:00:47
Total cpu time: 65.83u 0.08s 65.91t Elapsed: 00:00:58
Start: Thu Aug 15 13:04:15 2013 End: Thu Aug 15 13:05:13 2013
WARNINGS ISSUED: 2