BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12045
         (117 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q09103|DGK2_DROME Eye-specific diacylglycerol kinase OS=Drosophila melanogaster GN=rdgA
            PE=2 SV=2
          Length = 1457

 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 38/55 (69%), Positives = 45/55 (81%)

Query: 56   LQAGGHGIAICQCKSAKIVTTKTIPMQVDGEACRVNPSIILLNHLNKAPMLAKRK 110
            LQAG HG  ICQC+ A+I+T +TIPMQVDGEACRV PS+I +  LNKA ML+KRK
Sbjct: 1087 LQAGMHGTCICQCRKARIITKRTIPMQVDGEACRVKPSVIEIELLNKALMLSKRK 1141


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.292    0.119    0.301 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,396,681
Number of Sequences: 539616
Number of extensions: 3536326
Number of successful extensions: 630447
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 9283
Number of HSP's successfully gapped in prelim test: 467
Number of HSP's that attempted gapping in prelim test: 127591
Number of HSP's gapped (non-prelim): 198886
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.6 bits)
S2: 55 (25.8 bits)