BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12048
(267 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2F5J3|WIBG_BOMMO Partner of Y14 and mago OS=Bombyx mori GN=wibg PE=2 SV=1
Length = 193
Score = 89.4 bits (220), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 113/255 (44%), Gaps = 84/255 (32%)
Query: 4 YIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPV 63
+I ++RPDGT+RK R+K GYVPQ+EVPLYESKGKQF RQ +P+GL P V +
Sbjct: 16 FIPATQRPDGTWRKPRRIKEGYVPQEEVPLYESKGKQFRARQ-NDGLPVGLTPEIVAQAQ 74
Query: 64 NPQN------PIPGLVILDADDLGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVK 117
+ PIPG++I E K K+ + L ++
Sbjct: 75 KKKGQRSTIQPIPGMII---------------TVEKKKKKKKTVTGVEEAAEKLAKCEIQ 119
Query: 118 KPVNPQNPIPGLPPAPSELNFDNLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLK 177
+P P +P +++S + KR+KNL+KK+REI
Sbjct: 120 EPTLPSQSVP----------TESISQSDPTKRLKNLRKKLREIEF--------------- 154
Query: 178 VSLKPPAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQR 237
LE+KI++G +K+P+KDQ EK+ +
Sbjct: 155 -------------------------------------LEEKIKAGLLKSPDKDQKEKMSK 177
Query: 238 KPDLLSEIMALKLSL 252
K ++L+EI LK S+
Sbjct: 178 KNEILNEIDILKNSI 192
>sp|B0WII7|WIBG_CULQU Partner of Y14 and mago OS=Culex quinquefasciatus GN=wibg PE=3
SV=1
Length = 238
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 55/91 (60%), Gaps = 16/91 (17%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 61
G +I ++RPDGT+RK RV+ GYVPQ+EVPLYESKGK FA + S+P GL P +K
Sbjct: 10 GKFIPATQRPDGTWRKPRRVRDGYVPQEEVPLYESKGKLFAQK---PSLPPGLPPEMAQK 66
Query: 62 PVN-------------PQNPIPGLVILDADD 79
QNP+PGL+IL D+
Sbjct: 67 AREKREKEQRKAAARPAQNPVPGLLILHEDN 97
>sp|Q16LW2|WIBG_AEDAE Partner of Y14 and mago OS=Aedes aegypti GN=wibg PE=3 SV=1
Length = 253
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 23/97 (23%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 61
G +I ++RPDGT+RK RV+ GYVPQ+EVPLYESKGK FA + +P G+ P +K
Sbjct: 10 GKFIPSTQRPDGTWRKPRRVRDGYVPQEEVPLYESKGKLFAQKPL---LPPGMSPEMAQK 66
Query: 62 PVN--------------------PQNPIPGLVILDAD 78
PQNP+PGL+IL+ D
Sbjct: 67 SREKREREQRIKQQREADANRRPPQNPVPGLLILNGD 103
>sp|P82804|WIBG_DROME Partner of Y14 and mago OS=Drosophila melanogaster GN=wibg PE=1
SV=1
Length = 207
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQF-ANRQAAQSIPIGLDP 56
G +I ++RPDGT+RKA RVK GYVPQ+EVPLYESKGKQF A RQA +P G+ P
Sbjct: 10 GKFIPATKRPDGTWRKARRVKDGYVPQEEVPLYESKGKQFVAQRQAG--VPPGMCP 63
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 88/196 (44%), Gaps = 54/196 (27%)
Query: 81 GYVPQDEVPLYESKGKQF-ANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFD 139
GYVPQ+EVPLYESKGKQF A RQA G+PP L
Sbjct: 32 GYVPQEEVPLYESKGKQFVAQRQA------------------------GVPPGMCPLLAA 67
Query: 140 NLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKVSLKPP------------APSE 187
E ++ KK+ +E Q P P L + S PP PS
Sbjct: 68 ESKKEREKQERTRAKKQEKESGRQPKAPA--PGVLVMPPSTCPPPKVSQQQQQQQQQPSG 125
Query: 188 LNFDNLSPEELE---------------KRIKNLKKKVREIKTLEQKIESGEIKNPEKDQL 232
N + LE K++K L+KK+REI+ +E +I++GE K +KDQL
Sbjct: 126 SRDINSISKTLEDTLKLDAAQEVVDPAKQLKKLRKKIREIEQIESRIQAGEQKKLDKDQL 185
Query: 233 EKLQRKPDLLSEIMAL 248
+K+++K ++L +I L
Sbjct: 186 DKVKKKSEILRQIKDL 201
>sp|B4NSP6|WIBG_DROSI Partner of Y14 and mago OS=Drosophila simulans GN=wibg PE=3 SV=2
Length = 204
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 44/56 (78%), Gaps = 3/56 (5%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQF-ANRQAAQSIPIGLDP 56
G +I ++RPDGT+RKA RVK GYVPQ+EVPLYESKGKQF A RQA +P G+ P
Sbjct: 10 GKFIPATKRPDGTWRKARRVKDGYVPQEEVPLYESKGKQFVAQRQAG--VPPGMCP 63
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 55/195 (28%)
Query: 81 GYVPQDEVPLYESKGKQF-ANRQAAQSIPIGLDP---------------SHVKKP----- 119
GYVPQ+EVPLYESKGKQF A RQA +P G+ P + KK
Sbjct: 32 GYVPQEEVPLYESKGKQFVAQRQAG--VPPGMCPLVAAESKKEREKQERTRAKKQEKESG 89
Query: 120 VNPQNPIPG---LPPA---PSELNFDNLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQ 173
P+ P PG +PP+ P +++ + I ++ K + +
Sbjct: 90 RQPKAPAPGVLVMPPSTCPPPKVSQQQQQQPSGSRDINSISKAMED-------------- 135
Query: 174 LNLKVSLKPPAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLE 233
+LK AP E+ + P K++K L+KK+REI+ +E +I++GE K +KDQL+
Sbjct: 136 -----TLKLDAPQEV----VDPA---KQLKKLRKKIREIEQIESRIQAGEQKKLDKDQLD 183
Query: 234 KLQRKPDLLSEIMAL 248
K+++K ++L +I L
Sbjct: 184 KVKKKSEILRQIKDL 198
>sp|Q8CHP5|WIBG_MOUSE Partner of Y14 and mago OS=Mus musculus GN=Wibg PE=1 SV=2
Length = 203
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 31/172 (18%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GYVPQ+EVP+YE+K +F ++ +P GL P PV P P G E
Sbjct: 35 GYVPQEEVPVYENKYVKFF--KSKPELPPGLSP-EATTPVTPSRPEGG------ETGLSK 85
Query: 141 LSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKVSLKPPA--PSELN--------- 189
+ +NLK+K + Q + R L+ KVSL A PS L
Sbjct: 86 TAK-------RNLKRKEKRRQQQEKEAEALSRTLD-KVSLGDTAQIPSALQGPQATPLAA 137
Query: 190 ---FDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRK 238
D+ + E K+IKNL+KK+R+++ L+Q+I++GE+ P ++QLEKL R+
Sbjct: 138 SDPSDSAATTEKAKKIKNLRKKLRQVEELQQRIQAGEVSQPSREQLEKLARR 189
>sp|Q7Q6B5|WIBG_ANOGA Partner of Y14 and mago OS=Anopheles gambiae GN=wibg PE=3 SV=4
Length = 233
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 3/60 (5%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 61
G +I ++RPDGT+RK RV+ GYVPQ+EVPLYESKGKQFA + A +P GL P V+K
Sbjct: 10 GKFIPATQRPDGTWRKPRRVRDGYVPQEEVPLYESKGKQFAQKPA---LPPGLSPEVVQK 66
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/38 (65%), Positives = 29/38 (76%), Gaps = 3/38 (7%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 118
GYVPQ+EVPLYESKGKQFA + A +P GL P V+K
Sbjct: 32 GYVPQEEVPLYESKGKQFAQKPA---LPPGLSPEVVQK 66
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 209 VREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMALKL 250
+REI+ +E K+ S + +KDQLEK++RKPD+L EI L++
Sbjct: 185 IREIEAIETKLRSTDGPKLDKDQLEKVKRKPDILQEIEELEV 226
>sp|Q640E9|WIBG_XENLA Partner of Y14 and mago OS=Xenopus laevis GN=wibg PE=2 SV=1
Length = 199
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 15/177 (8%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFD- 139
GYVPQ+EVP+YE+K +F ++ S+P GL + P P A + L+
Sbjct: 33 GYVPQEEVPVYENKYVKFF--KSKPSLPPGL----CEADGTTGQAQPSKPDADASLSKTA 86
Query: 140 --NLSPEELEKRIKNLKKKVREI--TVQVTHPVEMPRQLNLKVSLKPPAPSELNFDNLSP 195
NL +E K+ K +++V E ++ + + P Q N+ + K + S N S
Sbjct: 87 KRNLKRKEKRKQEKGEREQVEETRQDLERVNISDTPVQKNVTSAHKNGSASSDN----SA 142
Query: 196 EELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMALKLSL 252
E K+IKNL+KK+R+++ L+QKI+ GEI P K+QLEKL R+ L EI L+L L
Sbjct: 143 AEKAKKIKNLRKKLRQVEELQQKIDCGEIIQPSKEQLEKLARRKALEDEIEDLELDL 199
>sp|B1WB17|WIBG_XENTR Partner of Y14 and mago OS=Xenopus tropicalis GN=wibg PE=2 SV=1
Length = 200
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 8/160 (5%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GYVPQ+EVP+YE+K +F ++ S+P GL + Q P S+ N
Sbjct: 33 GYVPQEEVPVYENKYVKFF--KSKPSLPPGLSETDASTGKTQQPSKPDADTTLSKTAKRN 90
Query: 141 LSPEELEKRIKNLKKKVREI--TVQVTHPVEMPRQLNLKVSLKPPAPSELNFDNLSPEEL 198
+ +E K+ K +++V + ++ + E P Q NL + K + S DN + E+
Sbjct: 91 MKRKEKRKQEKGEREQVEDARQDLERVNISETPVQKNLTSAHKNGSASS---DNPAAEKA 147
Query: 199 EKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRK 238
K+IKNL+KK+R+++ L+QKI+SGEIK P K+QLEKL R+
Sbjct: 148 -KKIKNLRKKLRQVEELQQKIDSGEIKEPSKEQLEKLSRR 186
>sp|Q9BRP8|WIBG_HUMAN Partner of Y14 and mago OS=Homo sapiens GN=WIBG PE=1 SV=1
Length = 204
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 1 MGVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVK 60
G YI ++RPDGT+RK RVK GYVPQ+EVP+YE+K +F + +P GL P
Sbjct: 12 TGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKP--ELPPGLSP-EAT 68
Query: 61 KPVNPQNPIPG 71
PV P P G
Sbjct: 69 APVTPSRPEGG 79
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GYVPQ+EVP+YE+K +F + +P GL P PV P P G P S+ N
Sbjct: 35 GYVPQEEVPVYENKYVKFFKSKP--ELPPGLSP-EATAPVTPSRP-EGGEPGLSKTAKRN 90
Query: 141 LSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNL----KVSLKPPAPSELNFDNLSPE 196
L + EKR + +K E + V + L + S P + D+ +
Sbjct: 91 L--KRKEKRRQQQEKGEAEALSRTLDKVSLEETAQLPSAPQGSRAAPTAASDQPDSAATT 148
Query: 197 ELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRK 238
E K+IKNLKKK+R+++ L+Q+I++GE+ P K+QLEKL R+
Sbjct: 149 EKAKKIKNLKKKLRQVEELQQRIQAGEVSQPSKEQLEKLARR 190
>sp|B5XG19|WIBGB_SALSA Partner of Y14 and mago B OS=Salmo salar GN=wibgb PE=2 SV=2
Length = 192
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 61
G YI ++RPDGT+RK +VK GY PQ+EVP+YE+K +F + +P G+ P +
Sbjct: 11 GKYIAATQRPDGTWRKPRKVKDGYTPQEEVPVYENKFVKFF--KGKPDLPPGMSPGDEAQ 68
Query: 62 PVNPQNPIPGLV 73
Q IPG+
Sbjct: 69 ARQQQQGIPGIA 80
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 91/170 (53%), Gaps = 16/170 (9%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GY PQ+EVP+YE+K +F + +P G+ P + Q IPG+ A SE +
Sbjct: 33 GYTPQEEVPVYENKFVKFF--KGKPDLPPGMSPGDEAQARQQQQGIPGI--AESETAGLS 88
Query: 141 LSPEELEKRIKNLKKKVREITVQ-VTHPVEMPRQLNLKVSLKPPAPSELNFD-NLSPEEL 198
+ + KR + K + + V+ + + VEMP P+E D + + E
Sbjct: 89 KTAKRNMKRKEKRKLQGPDSNVEALINAVEMPTS----------NPAEATNDPSGAAAEK 138
Query: 199 EKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMAL 248
K+IKNLKKK+R+++ L+QK++SGEIK K+QL+KL R + ++ L
Sbjct: 139 AKKIKNLKKKLRQVEELQQKLDSGEIKQATKEQLDKLGRAKAIQDGLLQL 188
>sp|B5XDD3|WIBGA_SALSA Partner of Y14 and mago A OS=Salmo salar GN=wibga PE=2 SV=1
Length = 202
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 3/72 (4%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 61
G YI ++RPDGT+RK RVK GY PQ+EVP+YE+K +F + +P G+ P + +
Sbjct: 11 GKYIAATQRPDGTWRKPRRVKDGYTPQEEVPVYENKFVKFF--KGKPDLPPGMSPGNAAQ 68
Query: 62 PVNPQNPIPGLV 73
Q IPG+
Sbjct: 69 -ARQQQGIPGIA 79
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GY PQ+EVP+YE+K +F + +P G+ P + + Q IPG+ A +E+ +
Sbjct: 33 GYTPQEEVPVYENKFVKFF--KGKPDLPPGMSPGNAAQ-ARQQQGIPGI--AENEIAGLS 87
Query: 141 LSPEELEKRIKNLKKKVREITVQ-VTHPVEMPRQLNLKVSLKPPA-PSELNFDNLSP-EE 197
+ + KR + K++ + V+ +T+ VE ++ P + P+ +D S E
Sbjct: 88 KTAKRNMKRKEKRKQQGPDSNVELLTNAVETMTFAEDGDNVTPASNPAGATYDPSSAIAE 147
Query: 198 LEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMAL 248
K+IKN+KKK+R+++ L+QK++SGEIK K+Q EKL R L E++ L
Sbjct: 148 KAKKIKNIKKKLRQVEELQQKLDSGEIKQATKEQQEKLGRAKALQGELLQL 198
>sp|A6QPH1|WIBG_BOVIN Partner of Y14 and mago OS=Bos taurus GN=WIBG PE=2 SV=1
Length = 203
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKK 61
G YI ++RPDGT+RK RVK GYVPQ+EVP+YE+K +F + +P GL P
Sbjct: 12 GKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKP--ELPPGLSP-EATA 68
Query: 62 PVNPQNPIPG 71
P+ P G
Sbjct: 69 PITASRPEGG 78
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GYVPQ+EVP+YE+K +F + +P GL P P+ P G PA S+ N
Sbjct: 34 GYVPQEEVPVYENKYVKFFKSKP--ELPPGLSP-EATAPITASRP-EGGEPALSKTAKRN 89
Query: 141 LSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNL----KVSLKPPAPSELNFDNLSPE 196
L + EKR + +K E + V + + + S P + D+ +
Sbjct: 90 L--KRKEKRRQQQEKGEAEALSRTLEKVSLGETAQVPSAPQASRAAPTAASDQPDSAATT 147
Query: 197 ELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRK 238
E K+IKNLKKK+R+++ L+Q+I++GEI P K+QLEKL R+
Sbjct: 148 EKAKKIKNLKKKLRQVEELQQRIQAGEISQPSKEQLEKLARR 189
>sp|Q6PH11|WIBG_DANRE Partner of Y14 and mago OS=Danio rerio GN=wibg PE=2 SV=1
Length = 194
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 32/40 (80%)
Query: 2 GVYIQPSRRPDGTFRKAIRVKAGYVPQDEVPLYESKGKQF 41
G YI ++RPDG++RK RV+ GYVPQ+EVP+YE+K +F
Sbjct: 11 GKYIAATQRPDGSWRKPRRVRDGYVPQEEVPVYENKFVKF 50
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 75/186 (40%), Gaps = 46/186 (24%)
Query: 81 GYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDN 140
GYVPQ+EVP+YE+K +F KP P PP D
Sbjct: 33 GYVPQEEVPVYENKFVKFFK----------------SKPELPPGVCVETPPQTQTQPSDA 76
Query: 141 LSPEELEKRIKNLKKKVREITVQVTHPV------------------EMPRQLNLKVSLKP 182
KR K+K R+ + + +QL L S P
Sbjct: 77 AGLSRTAKRNMKRKEKRRQQGQETKSEPELQPEPELQPEPEPQGLSQQMQQLELSASQGP 136
Query: 183 PAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLL 242
A +R+KNL+KK+R+++ L+Q++ SGE+K P ++QL+KL R L
Sbjct: 137 GAADSA-----------RRLKNLRKKLRQVEELQQRVLSGELK-PSQEQLDKLGRAQALR 184
Query: 243 SEIMAL 248
E+ L
Sbjct: 185 EELQQL 190
>sp|Q19052|EIF2A_CAEEL Eukaryotic translation initiation factor 2A OS=Caenorhabditis
elegans GN=E04D5.1 PE=3 SV=2
Length = 570
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 197 ELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMALKL 250
E E++ LKKKV EIK L+Q++ +G+ P +Q+EK+QR+ + LSE+ L +
Sbjct: 519 EQERKAFQLKKKVEEIKVLKQRVANGDQLQP--NQMEKIQRENEYLSELSKLTI 570
>sp|A8GU44|DAPE_RICRS Succinyl-diaminopimelate desuccinylase OS=Rickettsia rickettsii
(strain Sheila Smith) GN=dapE PE=3 SV=1
Length = 381
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 58 HVKKPVNPQNPIPGLVILDADDLGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVK 117
HV P NP+P L+I+ ++L + DE G +F R L+ ++++
Sbjct: 197 HVAYPHKANNPLPCLIII-LNELTNIKLDE-------GTEFFQRS-------NLEVTNIE 241
Query: 118 KPVNPQNPIPGLPPAPSELNFDNL-SPEELEKRIKNLKKK 156
N N IP A + F+NL S E L K+++ + K+
Sbjct: 242 VSNNTSNVIPASTEASFNIRFNNLHSAETLAKQVEEIIKQ 281
>sp|B0BVN5|DAPE_RICRO Succinyl-diaminopimelate desuccinylase OS=Rickettsia rickettsii
(strain Iowa) GN=dapE PE=3 SV=2
Length = 381
Score = 36.6 bits (83), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 58 HVKKPVNPQNPIPGLVILDADDLGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSHVK 117
HV P NP+P L+I+ ++L + DE G +F R L+ ++++
Sbjct: 197 HVAYPHKANNPLPCLIII-LNELTNIKLDE-------GTEFFQRS-------NLEVTNIE 241
Query: 118 KPVNPQNPIPGLPPAPSELNFDNL-SPEELEKRIKNLKKK 156
N N IP A + F+NL S E L K+++ + K+
Sbjct: 242 VSNNTSNVIPASTEASFNIRFNNLHSAETLAKQVEEIIKQ 281
>sp|C4K2X8|DAPE_RICPU Succinyl-diaminopimelate desuccinylase OS=Rickettsia peacockii
(strain Rustic) GN=dapE PE=3 SV=1
Length = 381
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 56 PSHVKKPVNPQNPIPGLVILDADDLGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSH 115
HV P NP+P L+I+ ++L + DE G +F R L+ ++
Sbjct: 195 SGHVAYPHKANNPLPCLIII-LNELTNIKLDE-------GTEFFQRS-------NLEVTN 239
Query: 116 VKKPVNPQNPIPGLPPAPSELNFDNL-SPEELEKRIKNLKKK 156
++ N N IP A + F+NL S E L K+++ + K+
Sbjct: 240 IEVSNNTSNVIPASTEASFNIRFNNLHSAETLAKQVEEIIKQ 281
>sp|Q92FY0|DAPE_RICCN Succinyl-diaminopimelate desuccinylase OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=dapE PE=3 SV=2
Length = 381
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 56 PSHVKKPVNPQNPIPGLVILDADDLGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSH 115
HV P NP+P L+I+ ++L + DE G +F R L+ ++
Sbjct: 195 SGHVAYPHKANNPLPCLIII-LNELTNIKLDE-------GTEFFQRS-------NLEVTN 239
Query: 116 VKKPVNPQNPIPGLPPAPSELNFDNL-SPEELEKRIKNLKKK 156
++ N N IP A + F+NL S E L K+++ + K+
Sbjct: 240 IEVSNNTSNVIPASTEASFNIRFNNLHSAETLAKQVEEIIKQ 281
>sp|C3PM12|DAPE_RICAE Succinyl-diaminopimelate desuccinylase OS=Rickettsia africae
(strain ESF-5) GN=dapE PE=3 SV=1
Length = 381
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 56 PSHVKKPVNPQNPIPGLVILDADDLGYVPQDEVPLYESKGKQFANRQAAQSIPIGLDPSH 115
HV P NP+P L+I+ ++L + DE G +F R L+ ++
Sbjct: 195 SGHVAYPHKANNPLPCLIII-LNELTNIKLDE-------GTEFFQRS-------NLEVTN 239
Query: 116 VKKPVNPQNPIPGLPPAPSELNFDNL-SPEELEKRIKNLKKK 156
++ N N IP A + F+NL S E L K+++ + K+
Sbjct: 240 IEVSNNTSNVIPASTEASFNIRFNNLHSAETLAKQVEEIIKQ 281
>sp|Q3UU96|MRCKA_MOUSE Serine/threonine-protein kinase MRCK alpha OS=Mus musculus
GN=Cdc42bpa PE=1 SV=2
Length = 1719
Score = 36.2 bits (82), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 129 LPPAPSELNFD---------NLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKVS 179
+ P+ L+ D NL+ E E+RIK L+++ E+T ++ + + L
Sbjct: 418 VTAGPTSLDLDVSVQRTLDNNLATEAYERRIKRLEQEKLELTRKLQESTQTVQALQYSTV 477
Query: 180 LKPPAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIE 220
P S+ +L + L++ I+ L+K+V E+ LEQ++E
Sbjct: 478 DGPLTASK----DLEIKSLKEEIEKLRKQVAEVNHLEQQLE 514
>sp|O54874|MRCKA_RAT Serine/threonine-protein kinase MRCK alpha OS=Rattus norvegicus
GN=Cdc42bpa PE=1 SV=1
Length = 1732
Score = 36.2 bits (82), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 13/101 (12%)
Query: 129 LPPAPSELNFD---------NLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKVS 179
+ P+ L+ D NL+ E E+RIK L+++ E+T ++ + + L
Sbjct: 418 VTAGPTSLDLDVNVQRTLDNNLATEAYERRIKRLEQEKLELTRKLQESTQTVQALQYSTV 477
Query: 180 LKPPAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIE 220
P S+ +L + L++ I+ L+K+V E+ LEQ++E
Sbjct: 478 DGPLTASK----DLEIKSLKEEIEKLRKQVAEVNHLEQQLE 514
>sp|Q5HY64|FA47C_HUMAN Putative protein FAM47C OS=Homo sapiens GN=FAM47C PE=2 SV=1
Length = 1035
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 63/147 (42%), Gaps = 16/147 (10%)
Query: 119 PVNPQNPIPGLPPAPSELNFDNLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKV 178
P P+ + LPP P E +L PE E R+ +L+ + E V HP E P+ +
Sbjct: 656 PEPPKTRVSSLPPEPPETGVSHLCPEPPETRVSHLRPEPPETGVSRLHP-EPPKTRVSSL 714
Query: 179 SLKP---------PAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIK---- 225
+P P P E +L PE + R+ +L+ + E + + E E
Sbjct: 715 HAEPPESRVSHLCPEPPETGVSHLRPEPPKPRVSSLRPEPLETRVSHLRPEPPETGVSHL 774
Query: 226 NPE--KDQLEKLQRKPDLLSEIMALKL 250
+PE K ++ L +P + +L+L
Sbjct: 775 HPELPKPRVSSLHLEPPKTRRVSSLRL 801
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 41/108 (37%), Gaps = 20/108 (18%)
Query: 119 PVNPQNPIPGLPPAPSELNFDNLSPEELEKRIKNLKKKVREITVQVTHPVE--------- 169
P P+ + LPP P E +L PE E R+ +L+ + E V P
Sbjct: 584 PEPPKTRVSSLPPEPPETGVSHLCPEPPETRVSHLRPEPPETGVSHLRPEPPKTRMYSLR 643
Query: 170 -----------MPRQLNLKVSLKPPAPSELNFDNLSPEELEKRIKNLK 206
P +VS PP P E +L PE E R+ +L+
Sbjct: 644 PEPPNTGVSHLCPEPPKTRVSSLPPEPPETGVSHLCPEPPETRVSHLR 691
>sp|Q54PV7|EIF2A_DICDI Eukaryotic translation initiation factor 2A OS=Dictyostelium
discoideum GN=eif2a PE=3 SV=1
Length = 608
Score = 35.4 bits (80), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 198 LEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMALKLSL 252
+EK+I+N+++K++E++ L++K+ SGE P +EK+ + L E+ L+ L
Sbjct: 556 IEKKIRNVERKLKEVEVLKEKLNSGEFIPPTA--IEKINNEQKFLEELRKLQSEL 608
>sp|Q3AEN8|SYA_CARHZ Alanine--tRNA ligase OS=Carboxydothermus hydrogenoformans (strain
Z-2901 / DSM 6008) GN=alaS PE=3 SV=1
Length = 874
Score = 35.0 bits (79), Expect = 0.54, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 181 KPPAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKN 226
K P + F L PE++ +K LK+K REI+ L QKI S E+K+
Sbjct: 716 KATEPYKCTFAEL-PEKISNTLKTLKEKDREIEALMQKIASIEVKS 760
>sp|Q55FT5|COG4_DICDI Conserved oligomeric Golgi complex subunit 4 OS=Dictyostelium
discoideum GN=cog4 PE=3 SV=1
Length = 911
Score = 34.3 bits (77), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 62/132 (46%), Gaps = 17/132 (12%)
Query: 140 NLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKV-SLKPPAPSELNFDNLSPEEL 198
NLS ++ +K ++NL + + I + + +++ L +++ S P L EL
Sbjct: 14 NLSIDDAKKYLQNLISRDKAIEINLKQHIKLKDDLEIQMESFDNEIPEYLTLSLKKSNEL 73
Query: 199 EKRI-------KNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMALKLS 251
RI +NL KV+++ + ++I KD L+K+ DL + I +++S
Sbjct: 74 NNRISSTCQLAENLSSKVKKLDNIRERI---------KDTLKKVDDIIDLKNCIEGVQIS 124
Query: 252 LHGEEGEGEGTH 263
+ E+ EG H
Sbjct: 125 IEKEDYEGAAFH 136
>sp|Q9VNX8|EIF2A_DROME Eukaryotic translation initiation factor 2A OS=Drosophila
melanogaster GN=CG7414 PE=1 SV=1
Length = 638
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 199 EKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIMALKLS 251
E++I+++ KK+ +IK L+ + GE N E +QL K++ + L E+ ALK S
Sbjct: 587 ERKIRSVAKKLSDIKKLKVRRSQGE--NLELNQLNKIKMEAQYLDELKALKQS 637
>sp|A8FFM9|SYA_BACP2 Alanine--tRNA ligase OS=Bacillus pumilus (strain SAFR-032) GN=alaS
PE=3 SV=1
Length = 878
Score = 33.5 bits (75), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%)
Query: 29 DEVPLYESKGKQFANRQAAQSIPIGLDPSHVKKPVNPQNPIPGLVILDADDLGYVPQDEV 88
DE P Y G Q A++ +S + +D VKK N Q+ G+V+ G V EV
Sbjct: 495 DETPFYAESGGQVADKGTLKSAEVIIDIKDVKKAPNGQHVHEGVVVSGTAKKGLVVTAEV 554
Query: 89 PLYESKG 95
KG
Sbjct: 555 ESALRKG 561
>sp|Q58673|LEUD_METJA Isopropylmalate/citramalate isomerase small subunit
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=leuD PE=1
SV=1
Length = 168
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 202 IKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKPDLLSEIM 246
K + +KV E LE +E+GEIKN ++ K Q+ P+ + EI+
Sbjct: 107 CKGISEKVNEGDELEVNLETGEIKNLTTGEVLKGQKLPEFMMEIL 151
>sp|Q5VT25|MRCKA_HUMAN Serine/threonine-protein kinase MRCK alpha OS=Homo sapiens
GN=CDC42BPA PE=1 SV=1
Length = 1732
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 15/112 (13%)
Query: 129 LPPAPSELNFD---------NLSPEELEKRIKNLKKKVREITVQVTHPVEMPRQLNLKVS 179
+ P+ L+ D NL+ E E+RIK L+++ E++ ++ + + L
Sbjct: 418 VTAGPTSLDLDVNVQRTLDNNLATEAYERRIKRLEQEKLELSRKLQESTQTVQALQYSTV 477
Query: 180 LKP-PAPSELNFDNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKD 230
P A +L NL EE+EK L+K+V E LEQ++E E D
Sbjct: 478 DGPLTASKDLEIKNL-KEEIEK----LRKQVTESSHLEQQLEEANAVRQELD 524
>sp|Q805A1|SMC5_XENLA Structural maintenance of chromosomes protein 5 OS=Xenopus laevis
GN=smc5 PE=2 SV=1
Length = 1065
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 13/111 (11%)
Query: 102 QAAQSIPIGLDPSHVKKPVNPQNPIPGLPPAPSELNFDNLSPEELEKRIKNLKKKVREIT 161
+ AQ + + +D Q + L + + S E+L +R ++L ++ E+
Sbjct: 618 KGAQFLTVTVDAEE------RQQVVDQLKEIERKCSTIETSMEQLAERQRSLDRRDNELR 671
Query: 162 VQVTHPVEMP---RQLNLKVSLKPPAPSELNFDNLSPEELEK----RIKNL 205
++ +EM RQL K+S K + + L DNL+ EE+++ RIKNL
Sbjct: 672 LRKKTILEMKTKKRQLEQKISTKYDSLNRLEQDNLNLEEVQQQANNRIKNL 722
>sp|Q97WH0|RAD50_SULSO DNA double-strand break repair Rad50 ATPase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=rad50 PE=3 SV=1
Length = 864
Score = 32.3 bits (72), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 143 PEELEKRIKNLKKKVREITVQVTHPVEMPRQ-LNLKVSLKPPAPSELNFDNLSPEELEKR 201
E+LE IKNL+K++++I Q + Q L L +LK ELN N S EEL K+
Sbjct: 206 KEKLEDEIKNLEKRIKDIKDQFDEYEKKRNQYLKLTTTLKIK-EGELNELNRSIEELRKQ 264
Query: 202 IKNLKKKVREIKTLE 216
+N+ + +EI LE
Sbjct: 265 TENMDQLEKEINELE 279
>sp|P53235|EIF2A_YEAST Eukaryotic translation initiation factor 2A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YGR054W PE=1
SV=1
Length = 642
Score = 32.0 bits (71), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 126 IPGLPPAPSELNFDNLSPEELEKRIKNLKKKVREITVQV--THPVEMPRQLNLKVSLKPP 183
+PG+PP ++ L P + N K + R + T P P P
Sbjct: 522 VPGVPPGAAKKTIPGLVPGMSANKDANTKNRRRRANKKSSETSPDSTP---------APS 572
Query: 184 APSELNF----DNLSPEELEKRIKNLKKKVREIKTLEQKIESGEIKNPEKDQLEKLQRKP 239
AP+ N SPEE K+I++L KK+R I+TL+++ G+ E Q+ K+Q +
Sbjct: 573 APASTNAPTNNKETSPEE--KKIRSLLKKLRAIETLKERQAVGD--KLEDTQVLKIQTEE 628
Query: 240 DLLSEIMAL 248
+L ++ L
Sbjct: 629 KVLKDLEKL 637
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.133 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,671,115
Number of Sequences: 539616
Number of extensions: 5133081
Number of successful extensions: 22550
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 384
Number of HSP's that attempted gapping in prelim test: 21715
Number of HSP's gapped (non-prelim): 1018
length of query: 267
length of database: 191,569,459
effective HSP length: 115
effective length of query: 152
effective length of database: 129,513,619
effective search space: 19686070088
effective search space used: 19686070088
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)