Your job contains 1 sequence.
>psy12049
MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE
GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12049
(102 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
RGD|1311417 - symbol:Col7a1 "collagen, type VII, alpha 1"... 159 7.4e-10 1
UNIPROTKB|F1NBA6 - symbol:F1NBA6 "Uncharacterized protein... 158 9.7e-10 1
MGI|MGI:2685260 - symbol:Otol1 "otolin 1 homolog (zebrafi... 142 5.7e-09 1
UNIPROTKB|F1PIP7 - symbol:COL7A1 "Uncharacterized protein... 150 7.7e-09 1
UNIPROTKB|E1BHU7 - symbol:OTOL1 "Uncharacterized protein"... 139 1.2e-08 1
RGD|1562064 - symbol:Otol1 "otolin 1" species:10116 "Ratt... 139 1.2e-08 1
MGI|MGI:88462 - symbol:Col7a1 "collagen, type VII, alpha ... 147 1.6e-08 1
UNIPROTKB|E1B7H2 - symbol:COL7A1 "Uncharacterized protein... 146 2.0e-08 1
UNIPROTKB|F1SKM1 - symbol:COL7A1 "Uncharacterized protein... 146 2.0e-08 1
UNIPROTKB|I3LEF4 - symbol:OTOL1 "Uncharacterized protein"... 134 4.1e-08 1
UNIPROTKB|F1P5B5 - symbol:OTOL1 "Uncharacterized protein"... 132 4.9e-08 1
UNIPROTKB|Q02388 - symbol:COL7A1 "Collagen alpha-1(VII) c... 142 5.5e-08 1
UNIPROTKB|A6NHN0 - symbol:OTOL1 "Otolin-1" species:9606 "... 130 1.1e-07 1
UNIPROTKB|F1NDC7 - symbol:MARCO "Uncharacterized protein"... 129 1.4e-07 1
ZFIN|ZDB-GENE-110728-4 - symbol:col5a3b "collagen, type V... 135 1.7e-07 1
RGD|1560136 - symbol:Rpgr "retinitis pigmentosa GTPase re... 129 1.9e-07 1
FB|FBgn0016075 - symbol:vkg "viking" species:7227 "Drosop... 135 1.9e-07 1
UNIPROTKB|F1RY09 - symbol:F1RY09 "Uncharacterized protein... 128 2.0e-07 1
ZFIN|ZDB-GENE-030131-9861 - symbol:col7a1l "collagen type... 134 2.2e-07 1
TAIR|locus:2183384 - symbol:GRP17 "AT5G07530" species:370... 128 2.2e-07 1
UNIPROTKB|Q5LKH1 - symbol:Q5LKH1 "Putative uncharacterize... 128 2.8e-07 1
TIGR_CMR|SPO_A0410 - symbol:SPO_A0410 "hypothetical prote... 128 2.8e-07 1
UNIPROTKB|D4A111 - symbol:Col6a3 "Procollagen, type VI, a... 134 2.8e-07 1
UNIPROTKB|E1BZN7 - symbol:MARCO "Uncharacterized protein"... 126 3.1e-07 1
UNIPROTKB|E2RLK6 - symbol:C1QTNF9 "Uncharacterized protei... 123 3.4e-07 1
UNIPROTKB|F1NF73 - symbol:MARCO "Uncharacterized protein"... 126 3.4e-07 1
ZFIN|ZDB-GENE-091118-111 - symbol:si:ch211-196i2.2 "si:ch... 129 3.4e-07 1
RGD|1308704 - symbol:Col6a3 "collagen, type VI, alpha 3" ... 134 3.5e-07 1
UNIPROTKB|E7ENL6 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 134 3.9e-07 1
UNIPROTKB|E9PCV6 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 134 3.9e-07 1
ZFIN|ZDB-GENE-070501-6 - symbol:col6a1 "collagen, type VI... 129 4.0e-07 1
UNIPROTKB|Q28092 - symbol:CYLC2 "Cylicin-2" species:9913 ... 125 4.0e-07 1
UNIPROTKB|P12111 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 134 4.2e-07 1
MGI|MGI:88459 - symbol:Col6a1 "collagen, type VI, alpha 1... 128 5.1e-07 1
WB|WBGene00003994 - symbol:pgl-3 species:6239 "Caenorhabd... 125 6.6e-07 1
UNIPROTKB|G5EBV6 - symbol:pgl-3 "Protein PGL-3, isoform a... 125 6.6e-07 1
ZFIN|ZDB-GENE-041111-303 - symbol:col6a6 "collagen, type ... 131 6.9e-07 1
UNIPROTKB|B2RNN3 - symbol:C1QTNF9B "Complement C1q and tu... 120 7.2e-07 1
UNIPROTKB|E2RFD8 - symbol:MARCO "Uncharacterized protein"... 122 8.0e-07 1
ZFIN|ZDB-GENE-030131-968 - symbol:col5a3a "collagen, type... 129 8.1e-07 1
FB|FBgn0259244 - symbol:CG42342 species:7227 "Drosophila ... 125 8.2e-07 1
UNIPROTKB|P20785 - symbol:COL6A1 "Collagen alpha-1(VI) ch... 126 8.3e-07 1
RGD|1565398 - symbol:Col6a1 "collagen, type VI, alpha 1" ... 126 8.4e-07 1
UNIPROTKB|E1BB91 - symbol:COL6A3 "Uncharacterized protein... 131 8.7e-07 1
UNIPROTKB|I3LS72 - symbol:COL6A1 "Uncharacterized protein... 121 9.0e-07 1
RGD|1589662 - symbol:Marco "macrophage receptor with coll... 122 9.2e-07 1
UNIPROTKB|E2RFD9 - symbol:MARCO "Uncharacterized protein"... 122 9.2e-07 1
ZFIN|ZDB-GENE-050707-1 - symbol:otol1a "otolin 1a" specie... 121 1.1e-06 1
ZFIN|ZDB-GENE-070802-4 - symbol:col4a3 "collagen, type IV... 127 1.1e-06 1
UNIPROTKB|F1MD40 - symbol:COL6A6 "Uncharacterized protein... 128 1.3e-06 1
UNIPROTKB|F1PS65 - symbol:OTOL1 "Uncharacterized protein"... 120 1.3e-06 1
UNIPROTKB|F1NL02 - symbol:COL22A1 "Uncharacterized protei... 126 1.4e-06 1
WB|WBGene00000702 - symbol:col-128 species:6239 "Caenorha... 119 1.4e-06 1
UNIPROTKB|E2R8U5 - symbol:COL24A1 "Uncharacterized protei... 126 1.5e-06 1
UNIPROTKB|B4DW79 - symbol:MARCO "Macrophage receptor MARC... 119 1.5e-06 1
UNIPROTKB|E1C989 - symbol:E1C989 "Uncharacterized protein... 124 1.5e-06 1
MGI|MGI:88465 - symbol:Col9a1 "collagen, type IX, alpha 1... 123 1.5e-06 1
UNIPROTKB|E1C4H5 - symbol:E1C4H5 "Uncharacterized protein... 124 1.6e-06 1
WB|WBGene00000745 - symbol:col-172 species:6239 "Caenorha... 117 1.6e-06 1
UNIPROTKB|B8ZZ64 - symbol:MARCO "Macrophage receptor MARC... 119 1.7e-06 1
GENEDB_PFALCIPARUM|PFF0595c - symbol:PFF0595c "leucine-ri... 126 1.7e-06 1
UNIPROTKB|C6KSW6 - symbol:PFF0595c "Leucine-rich repeat p... 126 1.7e-06 1
WB|WBGene00022046 - symbol:Y66H1A.4 species:6239 "Caenorh... 95 1.7e-06 2
UNIPROTKB|Q5H9L2 - symbol:TCEAL5 "Transcription elongatio... 94 1.8e-06 2
UNIPROTKB|F1NNK8 - symbol:COL25A1 "Uncharacterized protei... 119 1.9e-06 1
MGI|MGI:3648134 - symbol:Col6a5 "collagen, type VI, alpha... 127 1.9e-06 1
ZFIN|ZDB-GENE-030131-9003 - symbol:scaf4a "SR-related CTD... 123 1.9e-06 1
UNIPROTKB|Q9UEW3 - symbol:MARCO "Macrophage receptor MARC... 119 1.9e-06 1
UNIPROTKB|P20849 - symbol:COL9A1 "Collagen alpha-1(IX) ch... 122 2.0e-06 1
UNIPROTKB|F1RTT3 - symbol:COL9A1 "Uncharacterized protein... 122 2.0e-06 1
UNIPROTKB|G3MZ22 - symbol:G3MZ22 "Uncharacterized protein... 126 2.0e-06 1
UNIPROTKB|Q9BXS0 - symbol:COL25A1 "Collagen alpha-1(XXV) ... 120 2.1e-06 1
UNIPROTKB|F1NFE0 - symbol:COL6A1 "Collagen alpha-1(VI) ch... 122 2.2e-06 1
UNIPROTKB|E1BI98 - symbol:COL6A1 "Uncharacterized protein... 122 2.2e-06 1
MGI|MGI:88460 - symbol:Col6a2 "collagen, type VI, alpha 2... 122 2.3e-06 1
UNIPROTKB|Q5JSK9 - symbol:HMGN5 "High mobility group nucl... 110 2.5e-06 1
UNIPROTKB|E1BU12 - symbol:COL21A1 "Uncharacterized protei... 121 2.6e-06 1
UNIPROTKB|F1LNH3 - symbol:Col6a2 "Protein Col6a2" species... 121 2.9e-06 1
UNIPROTKB|P12109 - symbol:COL6A1 "Collagen alpha-1(VI) ch... 121 2.9e-06 1
UNIPROTKB|P82970 - symbol:HMGN5 "High mobility group nucl... 113 3.0e-06 1
UNIPROTKB|F1RS99 - symbol:COL6A5 "Uncharacterized protein... 125 3.1e-06 1
UNIPROTKB|F1NSR4 - symbol:LOC424167 "Uncharacterized prot... 121 3.1e-06 1
ASPGD|ASPL0000041560 - symbol:AN10372 species:162425 "Eme... 115 3.1e-06 1
UNIPROTKB|F1RTM0 - symbol:LOC100522569 "Uncharacterized p... 114 3.3e-06 1
ZFIN|ZDB-GENE-070209-167 - symbol:col11a1a "collagen, typ... 123 3.4e-06 1
ZFIN|ZDB-GENE-080303-33 - symbol:c1qtnf9 "C1q and tumor n... 114 3.4e-06 1
UNIPROTKB|F1MI94 - symbol:F1MI94 "Uncharacterized protein... 115 3.4e-06 1
ZFIN|ZDB-GENE-050327-86 - symbol:zgc:113232 "zgc:113232" ... 118 3.4e-06 1
RGD|735115 - symbol:Col27a1 "collagen, type XXVII, alpha ... 123 3.5e-06 1
UNIPROTKB|Q80ZF0 - symbol:Col27a1 "Collagen alpha-1(XXVII... 123 3.5e-06 1
UNIPROTKB|P12110 - symbol:COL6A2 "Collagen alpha-2(VI) ch... 120 3.6e-06 1
UNIPROTKB|F1P2F0 - symbol:COL6A3 "Collagen alpha-3(VI) ch... 125 3.7e-06 1
ZFIN|ZDB-GENE-070705-483 - symbol:si:dkey-61l1.4 "si:dkey... 120 4.6e-06 1
ZFIN|ZDB-GENE-080721-25 - symbol:zgc:194937 "zgc:194937" ... 117 4.7e-06 1
UNIPROTKB|I3LUR7 - symbol:COL6A3 "Uncharacterized protein... 124 4.8e-06 1
UNIPROTKB|F1MEH6 - symbol:COL25A1 "Uncharacterized protei... 115 5.0e-06 1
ZFIN|ZDB-GENE-030131-6117 - symbol:dido1 "death inducer-o... 123 5.3e-06 1
UNIPROTKB|E2RIU7 - symbol:COL21A1 "Uncharacterized protei... 118 5.5e-06 1
UNIPROTKB|F1NRD4 - symbol:ADIPOQ "Uncharacterized protein... 109 6.0e-06 1
UNIPROTKB|E1BRR4 - symbol:SCARA5 "Uncharacterized protein... 114 6.3e-06 1
WARNING: Descriptions of 331 database sequences were not reported due to the
limiting value of parameter V = 100.
>RGD|1311417 [details] [associations]
symbol:Col7a1 "collagen, type VII, alpha 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005604 "basement
membrane" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041
Pfam:PF00092 PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060
SMART:SM00327 RGD:1311417 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008160 Pfam:PF01391 IPI:IPI00951759
Ensembl:ENSRNOT00000066518 UCSC:RGD:1311417 ArrayExpress:D3ZQ14
Uniprot:D3ZQ14
Length = 2585
Score = 159 (61.0 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 43/87 (49%), Positives = 53/87 (60%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
GERG KG D G +KG DKG+ + G RG KG D GERG +G D G++G +G E
Sbjct: 2490 GERGEKG-DPGAAGLKG-DKGDSAVIEGPAGPRGAKG-DMGERGPRGID-GDQGPRG-ES 2544
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKG 97
G+ G KGS +GE G KGS G G +G
Sbjct: 2545 GDPGDKGS-KGEPGDKGS-AGSTGVRG 2569
Score = 131 (51.2 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/96 (39%), Positives = 52/96 (54%)
Query: 11 GERGMKGSD-----EGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
GE G++G D EG + G +GE K D G G+KG D+G+ + G R
Sbjct: 2463 GEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKG-DPGAAGLKG-DKGDSAVIEGPAGPR 2520
Query: 64 GMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G KG + GERG +G D+G RG G D G++G+KG
Sbjct: 2521 GAKG-DMGERGPRGIDGDQGPRGESG-DPGDKGSKG 2554
Score = 129 (50.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSD-----EGERGMKG--SDEGERGMKG 57
G S +G++G G+ G +G ++GE ++ D EG RG+ G GERG KG
Sbjct: 2440 GASGFKGDKGDSGA--GLPGPRG-ERGEPGLRGEDGHPGQEGPRGLMGPPGSRGERGEKG 2496
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
D G G+KG ++G+ + G RG KG D GERG +G D
Sbjct: 2497 -DPGAAGLKG-DKGDSAVIEGPAGPRGAKG-DMGERGPRGID 2535
Score = 114 (45.2 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 39/100 (39%), Positives = 53/100 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYV---MKSSDEGERGMKG--SDEGERGMKGSD 59
GR+ G G KG D G+ G G V ++S D+GE G +G +G+ G G+
Sbjct: 1676 GRNGTPGPSGPKG-DRGEPGPPGLP-GRLVDAALESRDKGEPGQEGPRGPKGDPGPPGAS 1733
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GERG+ G G G +G D G RG G D+G+RG+ G D
Sbjct: 1734 -GERGIDGLR-GPPGPQG-DPGVRGPAG-DKGDRGSPGLD 1769
Score = 105 (42.0 bits), Expect = 0.00040, P = 0.00040
Identities = 40/102 (39%), Positives = 52/102 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--- 59
G G + +G G+KG+ +G+ GSD G K D G G+KG D GE G +G D
Sbjct: 2088 GPGPAREQGPPGLKGA-KGE---PGSD-GVPGPKG-DRGVPGIKG-DAGEPGKRGPDGNP 2140
Query: 60 --EGERGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKG 97
GERG+ G E G+ G++G G G GS D G G G
Sbjct: 2141 GLPGERGVSGPE-GKPGLQGP-RGTPGPVGSHGDPGPPGAPG 2180
Score = 103 (41.3 bits), Expect = 0.00066, P = 0.00066
Identities = 34/92 (36%), Positives = 48/92 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEGERGMKGS 68
G G K D G+ + G +GE+ G G+ G D+G+ G+ G + GE G G
Sbjct: 1788 GASG-KAGDPGRDGLPGL-RGEHG-PPGPPGPPGVPGKPGDDGKPGLNGKN-GEPGDPG- 1842
Query: 69 EEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
E+G +G KG D G G +G D +GERG G+
Sbjct: 1843 EDGRKGEKG-DSGVPGREGPDGPKGERGAPGN 1873
>UNIPROTKB|F1NBA6 [details] [associations]
symbol:F1NBA6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092
PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060 SMART:SM00327
Gene3D:2.60.40.10 InterPro:IPR013783 SUPFAM:SSF49265
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
GeneTree:ENSGT00700000104250 EMBL:AADN02014041 EMBL:AADN02014042
EMBL:AADN02014043 EMBL:AADN02014044 EMBL:AADN02014045
EMBL:AADN02014046 EMBL:AADN02014047 EMBL:AADN02014048
EMBL:AADN02014049 EMBL:AADN02014050 IPI:IPI00812311
Ensembl:ENSGALT00000009331 OMA:FNRPNAG Uniprot:F1NBA6
Length = 2636
Score = 158 (60.7 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 41/91 (45%), Positives = 56/91 (61%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
+ GERG KG D G +G DKG+ V+ G RG KG + G+RG+KG+ EG++G KG
Sbjct: 2255 NRGERGDKG-DVGAVGQEG-DKGDTVVVEGPAGARGSKG-EPGDRGLKGT-EGDKGEKGE 2310
Query: 69 E--EGERGMKGSDEGERGTKGSDEGERGTKG 97
+ GE+G +G + GERG+ G G RG G
Sbjct: 2311 QGMPGEKGARG-EPGERGSAGFP-GARGPGG 2339
Score = 127 (49.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/100 (43%), Positives = 52/100 (52%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKG 57
M G KG GERG G + G KGE V + GE G+ G D G RG KG
Sbjct: 2313 MPGEKGARGEPGERGSAGFPGARG--PGGQKGE-VGVPGEPGEPGLPGRDGIAGARGEKG 2369
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
D G G++G + GERGMKG+ G G KG ++GE G G
Sbjct: 2370 -DIGPLGLRGPK-GERGMKGAC-GLDGDKG-EKGEPGLPG 2405
Score = 126 (49.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 41/96 (42%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G G+RG+KG+ EG KG +KGE M GE+G +G + GERG G G R
Sbjct: 2287 RGSKGEPGDRGLKGT-EGD---KG-EKGEQGMP----GEKGARG-EPGERGSAGFP-GAR 2335
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G G ++GE G+ G + GE G G D G RG KG
Sbjct: 2336 G-PGGQKGEVGVPG-EPGEPGLPGRDGIAGARGEKG 2369
Score = 125 (49.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 40/107 (37%), Positives = 58/107 (54%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSD--EGERGMKG--S 58
GR G RG KG D G ++G KGE MK + +G++G KG G G+ G
Sbjct: 2357 GRDGIAGARGEKG-DIGPLGLRGP-KGERGMKGACGLDGDKGEKGEPGLPGRSGLPGRKG 2414
Query: 59 DEGERGMKGS-----EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
+ GE G+ G+ +EG G KG +G++G KG D+GE+G +G+
Sbjct: 2415 EPGELGLSGAPGVPGKEGLMGPKGDRGFDGQQGAKG-DQGEKGDRGA 2460
Score = 120 (47.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 40/99 (40%), Positives = 50/99 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G +GERG+ G G+ KG D GE ++GE G G+ G+ G +G EGERG
Sbjct: 1398 GPKGEQGERGITGLT-GRSGPKG-DAGE----PGEKGEPGRVGAP-GQPGQRGK-EGERG 1449
Query: 65 MKGSE--EGERGMKGS--DEGERGTKG--SDEGERGTKG 97
KG E GE G+ G D G RG G GE+G G
Sbjct: 1450 EKGDEGTPGEAGVPGKPGDRGPRGLPGYRGPPGEKGELG 1488
Score = 113 (44.8 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 42/106 (39%), Positives = 54/106 (50%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDK--GEYVMKSSD--EGERGMKGS--DEGERG 54
M KG +G++G KG D+G+ +G+ G + SD G G GS G G
Sbjct: 2434 MGPKGDRGFDGQQGAKG-DQGEKGDRGAPGMIGTPGPRGSDGAPGPPGPPGSVGPRGPEG 2492
Query: 55 MKGSDEGERGMKGSEE-GERGMKGSDEGERGTKGSD--EGERGTKG 97
M+G +GERG G G RG+ G GERG +GS EG RG KG
Sbjct: 2493 MQGQ-KGERGPPGQAVMGARGVPGIP-GERGEQGSPGAEGLRGEKG 2536
Score = 109 (43.4 bits), Expect = 0.00015, P = 0.00015
Identities = 34/89 (38%), Positives = 50/89 (56%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G RG +G D G +G D G + + D G G+ G+ GERG KG D G G +G ++
Sbjct: 2224 GARGERG-DPGP---RGED-GRPGL-AGDRGPMGLPGN-RGERGDKG-DVGAVGQEG-DK 2274
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+ + G RG+KG + G+RG KG++
Sbjct: 2275 GDTVVVEGPAGARGSKG-EPGDRGLKGTE 2302
Score = 105 (42.0 bits), Expect = 0.00041, P = 0.00041
Identities = 37/109 (33%), Positives = 54/109 (49%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKG 57
++G KG GERG G EG G KG+ + + G +G G GERG++G
Sbjct: 1729 LRGQKGSRGEPGERGPPGR-EGSLGFPGERGPKGDKGDQGAP-GPQGPTGRAVGERGLEG 1786
Query: 58 -----SDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+ G+ G+ G GE G G GE+G +G ++G+RG +G D
Sbjct: 1787 PPGQPGEPGKPGIPGVPGRAGELGEAGRP-GEKGDRG-EKGDRGEQGRD 1833
Score = 102 (41.0 bits), Expect = 0.00086, P = 0.00086
Identities = 38/95 (40%), Positives = 49/95 (51%)
Query: 11 GERGMKGSD-EGKYVMKGSDKGE-YVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+ G G G KG +KGE +++ GE G KG+ G G KG ++GE G G
Sbjct: 2042 GDAGAPGQGIAGPPGAKG-EKGEPALLEGVLLGEPGSKGA-RGLPGPKG-EKGEPGGAGE 2098
Query: 69 --EEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
+ GE G KGS +GE+GT G G RG G D
Sbjct: 2099 PGDPGEDGAKGSSGVKGEKGTPGV--GVRGPPGQD 2131
>MGI|MGI:2685260 [details] [associations]
symbol:Otol1 "otolin 1 homolog (zebrafish)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008983 MGI:MGI:2685260 GeneTree:ENSGT00700000104099
HOGENOM:HOG000085653 HOVERGEN:HBG108220 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 HSSP:Q60994 eggNOG:NOG122858
OrthoDB:EOG48PMM8 CTD:131149 OMA:PFENFTL EMBL:DQ002405
EMBL:AK158454 EMBL:BC150904 IPI:IPI00356468 RefSeq:NP_001018041.2
UniGene:Mm.331071 ProteinModelPortal:Q4ZJM7 SMR:Q4ZJM7
STRING:Q4ZJM7 PhosphoSite:Q4ZJM7 PRIDE:Q4ZJM7
Ensembl:ENSMUST00000053013 GeneID:229389 KEGG:mmu:229389
UCSC:uc008pmo.2 InParanoid:Q4ZJM7 NextBio:379426 Bgee:Q4ZJM7
Genevestigator:Q4ZJM7 Uniprot:Q4ZJM7
Length = 482
Score = 142 (55.0 bits), Expect = 5.7e-09, P = 5.7e-09
Identities = 44/103 (42%), Positives = 61/103 (59%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDE--GERGMKGSDEG--ERG 54
KG KG G +G KGS +G+ G+ +KG+ + GE G KG G E+G
Sbjct: 189 KGDKGTIGPAGTKGQKGS-KGELCGNGTKGEKGDPGASGAHGFIGEPGAKGEKGGVGEKG 247
Query: 55 MKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G D GERG KG ++GE+GM+G ++G RG GS EG+RG+ G
Sbjct: 248 YRG-DLGERGEKG-QKGEKGMEG-EKGSRGDVGS-EGKRGSDG 286
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/107 (39%), Positives = 58/107 (54%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G +G+ G G+ G ++ + KGE GE+G +G D GERG KG +GE
Sbjct: 212 GNGTKGEKGDPGASGA-HG-FIGEPGAKGE----KGGVGEKGYRG-DLGERGEKGQ-KGE 263
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG-----SDEGERGTKG---SDDY 101
+GM+G E+G RG GS EG+RG+ G D G +G KG S +
Sbjct: 264 KGMEG-EKGSRGDVGS-EGKRGSDGLPGLRGDSGPKGEKGEIGSPGF 308
Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 44/107 (41%), Positives = 55/107 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG-----S 58
KG GE+G +G D G+ KG KGE M+ ++G RG GS EG+RG G
Sbjct: 237 KGEKGGVGEKGYRG-DLGERGEKGQ-KGEKGMEG-EKGSRGDVGS-EGKRGSDGLPGLRG 292
Query: 59 DEGERGMKGSEEGERGMKG--SDEGERGTKG-----SDEGERGTKGS 98
D G +G KG E G G G +GE G+KG +G RG KGS
Sbjct: 293 DSGPKGEKG-EIGSPGFTGPAGPKGELGSKGVRGPTGKKGSRGVKGS 338
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +GE+G+KG D G G G Y K ++G G KG D+G G G+ +G++
Sbjct: 150 QGPKGQKGEKGLKG-DRGDQGA-GGIPG-YPGKPGEQGALGPKG-DKGTIGPAGT-KGQK 204
Query: 64 GMKGS--EEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G KG G +G KG D G G G + G +G KG
Sbjct: 205 GSKGELCGNGTKGEKG-DPGASGAHGFIGEPGAKGEKG 241
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMK--SSDEGERGMKGSD--EGERGMK 56
KG KG EGE+G +G D G +GSD G ++ S +GE+G GS G G K
Sbjct: 258 KGQKGEKGMEGEKGSRG-DVGSEGKRGSD-GLPGLRGDSGPKGEKGEIGSPGFTGPAGPK 315
Query: 57 GSDEGERGMKG--SEEGERGMKGSDEGE 82
G + G +G++G ++G RG+KGS +GE
Sbjct: 316 G-ELGSKGVRGPTGKKGSRGVKGS-KGE 341
>UNIPROTKB|F1PIP7 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:AAEX03012233 Ensembl:ENSCAFT00000019781 Uniprot:F1PIP7
Length = 2936
Score = 150 (57.9 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 41/87 (47%), Positives = 52/87 (59%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
GERG KG D G +KG DKG+ + G RG KG D GERG+ G D G++G +G +
Sbjct: 2495 GERGEKG-DAGTSGLKG-DKGDAALAMGAPGPRGAKG-DMGERGLPGID-GDKGPRG-DT 2549
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKG 97
G G KG+ +GE G KGS G G +G
Sbjct: 2550 GNPGEKGT-KGEPGDKGS-AGLLGARG 2574
Score = 125 (49.1 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 39/97 (40%), Positives = 51/97 (52%)
Query: 11 GERGMKG-SDEGKYVMKGSDKGEYVMKSSD-----EGERGMKG--SDEGERGMKGSDEGE 62
G +G KG S G +G ++GE ++ D EG RG+ G GERG KG D G
Sbjct: 2448 GPKGDKGDSGVGLPGARG-ERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKG-DAGT 2505
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+KG ++G+ + G RG KG D GERG G D
Sbjct: 2506 SGLKG-DKGDAALAMGAPGPRGAKG-DMGERGLPGID 2540
Score = 115 (45.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/105 (36%), Positives = 51/105 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +GERG +G D G + G + DE G+ G +G G KG+ +GE
Sbjct: 2056 RGERGEKGERGEQGRD-GPPGLPGPPGPPGPKVAVDEPGPGLSGV-QGPPGFKGA-KGEP 2112
Query: 64 GMKGSE--EGERGMKG--SDEGERGTKGSD-----EGERGTKGSD 99
G G + +G+RGM G D GE G KG D GERG G +
Sbjct: 2113 GSDGDQGPKGDRGMPGIKGDRGEPGQKGLDGSPGLPGERGVAGPE 2157
Score = 112 (44.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 39/93 (41%), Positives = 50/93 (53%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDE--GERGMKGSDEGERGMKG--SDEGERGM 65
+G++G +G D G KG+ KGE K S G RG+ G +GE G G D G G
Sbjct: 2540 DGDKGPRG-DTGNPGEKGT-KGEPGDKGSAGLLGARGLTGP-KGEPGAAGIPGDPGSPGK 2596
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G+ G RG KG D G G +G +GERG KG+
Sbjct: 2597 DGTP-GVRGDKG-DTGFMGPRGL-KGERGVKGA 2626
Score = 112 (44.5 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 39/101 (38%), Positives = 54/101 (53%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
KG +G + + GE+G KG D+G + G+ +G K + G G+ G D G G G+
Sbjct: 2543 KGPRGDTGNPGEKGTKGEPGDKGSAGLLGA-RGLTGPKG-EPGAAGIPG-DPGSPGKDGT 2599
Query: 59 DEGERGMKGSEE--GERGMKGSDEGERGTKGSDEGERGTKG 97
G RG KG G RG+KG + G +G G D GE+G KG
Sbjct: 2600 P-GVRGDKGDTGFMGPRGLKG-ERGVKGACGLD-GEKGDKG 2637
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 37/105 (35%), Positives = 53/105 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS-DEGE 62
KG GERG G +G G + G + S G +G G GE+G KG ++G
Sbjct: 1396 KGDKGDRGERGPPGPGDGS-TAPG-EPGLPGLPGSP-GPQGPVGPS-GEKGEKGDCEDGA 1451
Query: 63 RGMKGS--EEGERGMKGSD-----EGERGTKGS--DEGERGTKGS 98
G+ G GE+G++G +G+RG KG+ D GE+G +GS
Sbjct: 1452 PGLPGQPGSPGEQGLRGPSGDIGPKGDRGPKGAVGDTGEKGERGS 1496
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 41/111 (36%), Positives = 50/111 (45%)
Query: 4 KGRSVHEGERGMKGSDEGKYV----------MKGSDKGEYVMKSSDEGERGMKGSDEGER 53
KG GERG++G D G +K S E ++++ DE E R
Sbjct: 1917 KGEQGLPGERGLRG-DPGSVGNVERLLETIGIKTSALRE-IVETWDESSGSFLPMPERRR 1974
Query: 54 GMKGSDEGERGMKGSE-----EGERGMKGS--DEGERGTKGSDEGERGTKG 97
G KG D GERG G E GERG+KG D G +G G GERG G
Sbjct: 1975 GPKG-DPGERGPPGKEGPIGFSGERGLKGERGDPGPQGPPGLALGERGPPG 2024
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 34/92 (36%), Positives = 49/92 (53%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEGERGMKGS 68
G G K D G+ + G +GE+ G G++G ++G+ G+ G + GE G G
Sbjct: 1793 GATG-KAGDPGRDGLPGL-RGEHG-PPGPPGPPGIQGKPGEDGKPGLNGKN-GEPGDPG- 1847
Query: 69 EEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
E+G +G KG D G G +G D +GERG GS
Sbjct: 1848 EDGRKGEKG-DSGAPGREGHDGPKGERGAPGS 1878
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 37/93 (39%), Positives = 44/93 (47%)
Query: 11 GERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG--ERG 64
GERG++G+ G KG D GE S G G KG D GE G G + G
Sbjct: 1651 GERGLRGAPGARGPVGEKGDQGDPGEDGRNGSP-GPSGPKG-DRGEPGPPGLPGRLVDSG 1708
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ E+GE G +G EG RG KG D G G G
Sbjct: 1709 LGAGEKGEPGDRGQ-EGPRGPKG-DPGPPGASG 1739
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 38/101 (37%), Positives = 52/101 (51%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGE--------YVMKSSDEGERGMKGSD--EGERGMKGSD 59
+GERG+KG+ G KG DKGE + D GE G+ G G+ G+ G
Sbjct: 2618 KGERGVKGAC-GLDGEKG-DKGEGGPPGRPGLAGRKGDMGEPGVPGQSGAPGKEGLIGP- 2674
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
+G+RG G + G +G +G ++GERG G G RG GS
Sbjct: 2675 KGDRGFDG-QPGSKGDQG-EKGERGPPGIGGFPGPRGNDGS 2713
Score = 102 (41.0 bits), Expect = 0.00096, P = 0.00096
Identities = 39/99 (39%), Positives = 52/99 (52%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGE--YVMKSSDEGERGMKGSDEGERGMKGS 58
KG+ G + G+ G G D G ++G DKG+ ++ +GERG+KG+ G G KG
Sbjct: 2579 KGEPGAAGIPGDPGSPGKD-GTPGVRG-DKGDTGFMGPRGLKGERGVKGAC-GLDGEKG- 2634
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
D+GE G G G G KG D GE G G G G +G
Sbjct: 2635 DKGEGGPPG-RPGLAGRKG-DMGEPGVPGQS-GAPGKEG 2670
>UNIPROTKB|E1BHU7 [details] [associations]
symbol:OTOL1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
OMA:PFENFTL EMBL:DAAA02002380 IPI:IPI00717324 UniGene:Bt.60993
Ensembl:ENSBTAT00000024606 NextBio:20874084 Uniprot:E1BHU7
Length = 473
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 44/94 (46%), Positives = 54/94 (57%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSDEGERGMKG--SDEGERGM 65
+G++G KG D +KG DKG+ V GE G KG ++GE G KG D ERG
Sbjct: 192 KGQKGSKG-DTCANGIKG-DKGDRGPVGAPGLNGEPGAKG-EKGEVGDKGYSGDSRERGE 248
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
KG E+GE GMKG E+G+KG D G G GSD
Sbjct: 249 KG-EKGEEGMKG----EKGSKG-DNGMEGKSGSD 276
Score = 125 (49.1 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 44/110 (40%), Positives = 56/110 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD---- 59
KG G++G G D + KG +KGE MK GE+G KG D G G GSD
Sbjct: 228 KGEKGEVGDKGYSG-DSRERGEKG-EKGEEGMK----GEKGSKG-DNGMEGKSGSDGLPG 280
Query: 60 -EGERGMKGSEEGERGMKG-----SDEGERGTKG-----SDEGERGTKGS 98
G+ G+KG E+GE G+ G +GE G+KG +G RG KGS
Sbjct: 281 VPGDPGVKG-EKGELGIPGLMGPVGPKGELGSKGVRGSIGKKGSRGLKGS 329
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/102 (42%), Positives = 57/102 (55%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVM--KSSDEGERGMKGSDEGERGMKGS 58
KG G S GE+G KG +EG KGS KG+ M KS +G G+ G D G +G KG
Sbjct: 237 KGYSGDSRERGEKGEKG-EEGMKGEKGS-KGDNGMEGKSGSDGLPGVPG-DPGVKGEKG- 292
Query: 59 DEGERGMKG-----SEEGERGMKGS--DEGERGTKGSDEGER 93
+ G G+ G E G +G++GS +G RG KGS +GE+
Sbjct: 293 ELGIPGLMGPVGPKGELGSKGVRGSIGKKGSRGLKGS-KGEQ 333
Score = 119 (46.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/110 (39%), Positives = 58/110 (52%)
Query: 2 KG-KGRSVHEGERGMKGSD-----EGKYVMKGS--DKGEY--VMKSSDEGERGMKGSDEG 51
KG KG +GERG +G+ GK G KG+ + + +G++G KG D
Sbjct: 144 KGQKGEKGFKGERGDQGASGVPGYPGKPGEPGGIGPKGDTGNIGPTGVKGQKGSKG-DTC 202
Query: 52 ERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKG 97
G+KG D+G+RG G+ GE G KG ++GE G KG D ERG KG
Sbjct: 203 ANGIKG-DKGDRGPVGAPGLNGEPGAKG-EKGEVGDKGYSGDSRERGEKG 250
>RGD|1562064 [details] [associations]
symbol:Otol1 "otolin 1" species:10116 "Rattus norvegicus"
[GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983 RGD:1562064
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
OrthoDB:EOG48PMM8 CTD:131149 OMA:PFENFTL IPI:IPI00368078
RefSeq:XP_001067275.1 RefSeq:XP_227256.3 PRIDE:D4AD22
Ensembl:ENSRNOT00000035765 GeneID:295117 KEGG:rno:295117
UCSC:RGD:1562064 NextBio:639002 Uniprot:D4AD22
Length = 482
Score = 139 (54.0 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 43/106 (40%), Positives = 60/106 (56%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDE--GERGMKGSDEG--ER 53
+KG KG G +G KGS +G G+ +KG+ + G+ G KG G E+
Sbjct: 188 LKGDKGNIGPAGTKGQKGS-KGDLCGNGTKGEKGDPGASGAHGFIGQPGAKGEKGGVGEK 246
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G +G D G+RG KG ++GE+GM EGE+G+KG D G G +GSD
Sbjct: 247 GYRG-DSGQRGEKG-QKGEKGM----EGEKGSKG-DVGAEGKRGSD 285
Score = 131 (51.2 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 46/110 (41%), Positives = 55/110 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD---- 59
KG GE+G +G D G+ KG KGE M EGE+G KG D G G +GSD
Sbjct: 237 KGEKGGVGEKGYRG-DSGQRGEKGQ-KGEKGM----EGEKGSKG-DVGAEGKRGSDGLPG 289
Query: 60 -EGERGMKGSEEGERGMKG-----SDEGERGTKG-----SDEGERGTKGS 98
G+ G KG E+GE G G +GE G KG +G RG KGS
Sbjct: 290 LRGDPGPKG-EKGETGSPGFTGPAGPKGELGNKGVRGPTGKKGSRGMKGS 338
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 40/100 (40%), Positives = 49/100 (49%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSD--EGERGMKG 57
KG KG G G G K G +KG Y S GE+G KG EGE+G KG
Sbjct: 216 KGEKGDPGASGAHGFIGQPGAKGEKGGVGEKG-YRGDSGQRGEKGQKGEKGMEGEKGSKG 274
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
D G G +GS+ G G++G D G +G KG + G G G
Sbjct: 275 -DVGAEGKRGSD-GLPGLRG-DPGPKGEKG-ETGSPGFTG 310
Score = 114 (45.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +GE+G+KG D G G G Y K ++G G+KG D+G G G+ +G++
Sbjct: 150 QGPKGQKGEKGLKG-DRGDQGA-GGIPG-YPGKPGEQGALGLKG-DKGNIGPAGT-KGQK 204
Query: 64 GMKGS--EEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G KG G +G KG D G G G G +G KG
Sbjct: 205 GSKGDLCGNGTKGEKG-DPGASGAHGFIGQPGAKGEKG 241
Score = 114 (45.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 36/96 (37%), Positives = 52/96 (54%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG G++G KG D G G+ G K +GE+G+KG D G++G G G
Sbjct: 120 KGEPGKTGQQGPKGETGDTGSPGPPGTS-GPQGPKGQ-KGEKGLKG-DRGDQGA-GGIPG 175
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G E+G G+KG D+G G G+ +G++G+KG
Sbjct: 176 YPGKPG-EQGALGLKG-DKGNIGPAGT-KGQKGSKG 208
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/88 (42%), Positives = 50/88 (56%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSD--EGERGMK 56
KG KG EGE+G KG D G +GSD G ++ +GE+G GS G G K
Sbjct: 258 KGQKGEKGMEGEKGSKG-DVGAEGKRGSD-GLPGLRGDPGPKGEKGETGSPGFTGPAGPK 315
Query: 57 GSDEGERGMKG--SEEGERGMKGSDEGE 82
G + G +G++G ++G RGMKGS +GE
Sbjct: 316 G-ELGNKGVRGPTGKKGSRGMKGS-KGE 341
>MGI|MGI:88462 [details] [associations]
symbol:Col7a1 "collagen, type VII, alpha 1" species:10090 "Mus
musculus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0005604
"basement membrane" evidence=IDA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0010466 "negative regulation of peptidase
activity" evidence=IEA] [GO:0030414 "peptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 MGI:MGI:88462 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004867 SUPFAM:SSF49265 GO:GO:0007155
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0005604 EMBL:AC174646 MEROPS:I02.967 CTD:1294
HOGENOM:HOG000111866 HOVERGEN:HBG051053 KO:K16628 OMA:RRVCTTA
OrthoDB:EOG4J117P EMBL:U32107 EMBL:S63654 IPI:IPI00134652
PIR:A45748 RefSeq:NP_031764.2 UniGene:Mm.6200 HSSP:P12111
ProteinModelPortal:Q63870 SMR:Q63870 STRING:Q63870
PhosphoSite:Q63870 PaxDb:Q63870 PRIDE:Q63870
Ensembl:ENSMUST00000026740 Ensembl:ENSMUST00000112070 GeneID:12836
KEGG:mmu:12836 UCSC:uc009rrh.1 GeneTree:ENSGT00700000104250
InParanoid:Q63870 NextBio:282356 Bgee:Q63870 CleanEx:MM_COL7A1
Genevestigator:Q63870 Uniprot:Q63870
Length = 2944
Score = 147 (56.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 41/87 (47%), Positives = 52/87 (59%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
GE+G KG+ G +KG DKG+ + G RG KG D GERG +G D G++G +G E
Sbjct: 2493 GEQGEKGA-AGAAGLKG-DKGDSAVIEGPPGPRGAKG-DMGERGPRGID-GDKGPRG-ES 2547
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKG 97
G G KGS +GE G KGS G G +G
Sbjct: 2548 GNPGDKGS-KGEPGDKGS-AGSIGVRG 2572
Score = 128 (50.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 39/101 (38%), Positives = 56/101 (55%)
Query: 1 MKGK-GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG 57
++G+ G EG RG+ G G+ KG+ G +K D+G+ + G RG KG
Sbjct: 2470 VRGEDGHPGQEGPRGLVGPPGSRGEQGEKGA-AGAAGLKG-DKGDSAVIEGPPGPRGAKG 2527
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
D GERG +G + G++G +G + G G KGS +GE G KGS
Sbjct: 2528 -DMGERGPRGID-GDKGPRG-ESGNPGDKGS-KGEPGDKGS 2564
Score = 115 (45.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/102 (36%), Positives = 55/102 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSD-----EGERGMKG--SDEGERGMKG 57
G S +G++G G+ G +G ++GE ++ D EG RG+ G GE+G KG
Sbjct: 2443 GASGLKGDKGDPGA--GLPGPRG-ERGEPGVRGEDGHPGQEGPRGLVGPPGSRGEQGEKG 2499
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+ G G+KG ++G+ + G RG KG D GERG +G D
Sbjct: 2500 A-AGAAGLKG-DKGDSAVIEGPPGPRGAKG-DMGERGPRGID 2538
Score = 115 (45.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 43/105 (40%), Positives = 57/105 (54%)
Query: 1 MKG-KGRS-VHEGERGMKGS--DEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERG 54
+KG KG S V EG G +G+ D G+ +G DKG +S + G++G KG + G++G
Sbjct: 2506 LKGDKGDSAVIEGPPGPRGAKGDMGERGPRGIDGDKGPRG-ESGNPGDKGSKG-EPGDKG 2563
Query: 55 MKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
GS G RG+ G + GE G G GE G G D G RG KG
Sbjct: 2564 SAGSI-GVRGLTGPK-GEPGAAGIP-GEPGAPGKDGIPGFRGDKG 2605
Score = 113 (44.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/102 (40%), Positives = 50/102 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYV---MKSSDEGERGMKGSDEGERGMKGSDEG 61
GR+ G G KG D G+ G G V ++S D+GE G EG RG KG D G
Sbjct: 1679 GRNGSPGSSGPKG-DRGEPGPPGPP-GRLVDAGIESRDKGEPGQ----EGPRGPKG-DPG 1731
Query: 62 ERGMKGSE--EGERGMKG--SDEGERGTKGSDEGERGTKGSD 99
G+ G +G RG G D G RG G D+G+RG G D
Sbjct: 1732 PPGVSGERGIDGLRGPPGPQGDPGVRGPAG-DKGDRGPPGLD 1772
Score = 108 (43.1 bits), Expect = 0.00022, P = 0.00022
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G + +G G+KG+ +G+ GSD G+ K D G G+KG D GE G +G D G
Sbjct: 2091 GPGLAREQGPPGLKGA-KGE---PGSD-GDPGPKG-DRGVPGIKG-DVGEPGKRGHD-GN 2142
Query: 63 RGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGS 98
G+ G E G G +G +G RGT G G+ G G+
Sbjct: 2143 PGLPG-ERGVAGPEGKPGLQGPRGTPGPVGSHGDPGPPGA 2181
Score = 108 (43.1 bits), Expect = 0.00022, P = 0.00022
Identities = 38/102 (37%), Positives = 51/102 (50%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGS 58
KG KG +GERG KG E + + G K D GE G+ G G+ G+ G
Sbjct: 2619 KGIKGTCGRDGERGDKG--EAGFPGRPGLAG----KKGDMGEPGLPGQSGAPGKEGLIGP 2672
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
+G+RG G + G +G +G ++GERG G G RG GS
Sbjct: 2673 -KGDRGFDG-QSGPKGDQG-EKGERGPPGVGGFPGPRGNDGS 2711
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 40/108 (37%), Positives = 57/108 (52%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGK---YVMKG--SDKGEYVMKSSDEGERGMKGSDEGER 53
KG +G S + G++G KG D+G ++G KGE + GE G G D G
Sbjct: 2541 KGPRGESGNPGDKGSKGEPGDKGSAGSIGVRGLTGPKGE-PGAAGIPGEPGAPGKD-GIP 2598
Query: 54 GMKGSDEGERGMKGSE--EGERGMKGS--DEGERGTKGSDEGERGTKG 97
G +G D+G+ G G +GE+G+KG+ +GERG KG + G G G
Sbjct: 2599 GFRG-DKGDIGFMGPRGLKGEKGIKGTCGRDGERGDKG-EAGFPGRPG 2644
Score = 104 (41.7 bits), Expect = 0.00059, P = 0.00059
Identities = 38/109 (34%), Positives = 54/109 (49%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKG--SDKGEYVMKSS-DEGERGMKGSDEGERGMKGSD 59
GR GERG KG D+G+ + G G K + +E G+ ++G G+KG+
Sbjct: 2049 GRPGERGERGEKGERGDQGRDGLPGLPGPPGPPGPKVAIEEPGPGL-AREQGPPGLKGA- 2106
Query: 60 EGERGMKGSE--EGERGMKG--SDEGERGTKGSD-----EGERGTKGSD 99
+GE G G +G+RG+ G D GE G +G D GERG G +
Sbjct: 2107 KGEPGSDGDPGPKGDRGVPGIKGDVGEPGKRGHDGNPGLPGERGVAGPE 2155
>UNIPROTKB|E1B7H2 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:DAAA02054431 IPI:IPI00706167 Ensembl:ENSBTAT00000025418
Uniprot:E1B7H2
Length = 2934
Score = 146 (56.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 42/96 (43%), Positives = 53/96 (55%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS-- 68
GERG KG D G +KG DKG+ + G RG KG D GERG +G D G++G +G
Sbjct: 2493 GERGEKG-DAGASGLKG-DKGDSAVILGPPGPRGAKG-DSGERGPRGID-GDKGPRGDSG 2548
Query: 69 EEGERGMKGS--DEGERGTKGS-----DEGERGTKG 97
E GE+G KG D+G G G+ +GE G G
Sbjct: 2549 EPGEKGTKGEPGDKGSAGLLGARGLMGPKGEPGAAG 2584
Score = 122 (48.0 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 38/101 (37%), Positives = 52/101 (51%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGS 58
+KG G G +G + G+ ++G D G + EG RG+ G GERG KG
Sbjct: 2447 LKGDKGDTGAGLPGARG-ERGEPGVRGED-G----RPGLEGPRGLAGPPGIRGERGEKG- 2499
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
D G G+KG ++G+ + G RG KG D GERG +G D
Sbjct: 2500 DAGASGLKG-DKGDSAVILGPPGPRGAKG-DSGERGPRGID 2538
Score = 115 (45.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 31/62 (50%), Positives = 38/62 (61%)
Query: 40 EGERGMKGSDEGERGMKGSDEGERGMKGS--EEGERGMKGSD--EGERGTKGSDEGERGT 95
+G +G GSD G+RG KG D GE G+KG E G+RG GS GERG G EG+ G
Sbjct: 2104 KGAKGDPGSD-GDRGPKG-DRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGP-EGKPGL 2160
Query: 96 KG 97
+G
Sbjct: 2161 QG 2162
Score = 114 (45.2 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 39/109 (35%), Positives = 55/109 (50%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKG--SDKGEYVMKSS-DEGERGMKGSDEGERGMKGS- 58
GR GERG KG ++G+ + G G K + DE G+ ++G G KG+
Sbjct: 2049 GRPGERGERGEKGERGEQGRDGLPGLPGPPGPPGPKVAVDEPGSGLS-REQGPPGFKGAK 2107
Query: 59 ----DEGERGMKGSEEGERGMKGS--DEGERGTKGSD--EGERGTKGSD 99
+G+RG KG + GE G+KG + G+RG GS GERG G +
Sbjct: 2108 GDPGSDGDRGPKG-DRGEPGIKGDRGEPGQRGPNGSPGLPGERGVAGPE 2155
Score = 111 (44.1 bits), Expect = 0.00011, P = 0.00011
Identities = 41/98 (41%), Positives = 49/98 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDE--GERGMKGSDEG 61
+G GERG +G D G +G D GE K + +GE G KGS G RG+ G +G
Sbjct: 2523 RGAKGDSGERGPRGID-GDKGPRG-DSGEPGEKGT-KGEPGDKGSAGLLGARGLMGP-KG 2578
Query: 62 ERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
E G G GE G G D G RG KG D G G +G
Sbjct: 2579 EPGAAGIP-GEPGSPGKDGVPGVRGDKG-DVGFMGPRG 2614
Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDE--GERGMKGSDEGERGMKGSDEGERGMKG 67
+G++G +G D G+ KG+ KGE K S G RG+ G +GE G G GE G G
Sbjct: 2538 DGDKGPRG-DSGEPGEKGT-KGEPGDKGSAGLLGARGLMGP-KGEPGAAGIP-GEPGSPG 2593
Query: 68 SE--EGERGMKGSDEGERGTKGSDEGERGTKGS 98
+ G RG KG D G G +G +GERG KG+
Sbjct: 2594 KDGVPGVRGDKG-DVGFMGPRGL-KGERGIKGA 2624
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 37/93 (39%), Positives = 45/93 (48%)
Query: 11 GERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG--ERG 64
GERG++G+ G KG D GE S G G KG D GE G G+ + G
Sbjct: 1649 GERGLRGAPGARGPVGEKGDQGDPGEEGRNGSP-GPSGPKG-DRGEPGPPGAPGRLVDVG 1706
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ E+GE G +G EG RG KG D G G G
Sbjct: 1707 LGAGEKGEPGDRGQ-EGPRGPKG-DPGPPGASG 1737
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS-DEGE 62
KG GE+G G +G + + G + S G +G G GE+G KG ++G
Sbjct: 1397 KGEKGDRGEQGPPGPGDGTAAL--GEPGLPGLPGSP-GPQGSVGPP-GEKGEKGDCEDGA 1452
Query: 63 RGMKGSE--EGERGMKG--SDEGERGTKG--SDEGERGTKGS 98
G+ G GERG++G D G +G +G GE+G +GS
Sbjct: 1453 PGLPGQPGIPGERGLRGLPGDAGPKGDRGLTGAAGEKGERGS 1494
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 40/111 (36%), Positives = 52/111 (46%)
Query: 4 KGRSVHEGERGMKGSDEGKYV----------MKGSDKGEYVMKSSDEGERGMKGSDEGER 53
+G GERG++G + G V +K S E ++++ +E G + E R
Sbjct: 1915 RGEQGLPGERGLRG-EPGSLVNAERLLENIGIKTSALRE-IVETWEESSGGFLPTPERRR 1972
Query: 54 GMKGSDEGERGMKGSE-----EGERGMKGS--DEGERGTKGSDEGERGTKG 97
G KG D GERG G E GERG KG D G +G G GERG G
Sbjct: 1973 GPKG-DPGERGPPGKEGPIGFSGERGPKGDRGDPGPQGPPGLALGERGLPG 2022
Score = 104 (41.7 bits), Expect = 0.00059, P = 0.00059
Identities = 39/105 (37%), Positives = 51/105 (48%)
Query: 1 MKGK-GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMK--SSDEGERGMKGSDEGERGM 55
+ GK G S G G G D G+ + G +GE + G G G D G+ G+
Sbjct: 1777 LDGKPGASGPPGPNGAMGKAGDPGRDGLPGL-RGEQGPPGPAGPPGAPGKPGED-GKPGL 1834
Query: 56 KGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G + GE G G E+G +G KG D G G +G D +GERG GS
Sbjct: 1835 NGKN-GEPGDPG-EDGRKGEKG-DSGAPGREGRDGPKGERGAPGS 1876
Score = 102 (41.0 bits), Expect = 0.00096, P = 0.00096
Identities = 39/98 (39%), Positives = 49/98 (50%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSD--EGERGMKGSDEGERGM 65
+GERG+KG+ G KG DKGE G RG G G+ G G EG G
Sbjct: 2616 KGERGIKGAC-GLDGEKG-DKGEAGPPGRPGLAGRRGELGEPGVPGQAGAPGK-EGLIGP 2672
Query: 66 KGSE--EGERGMKGSDEGERGTKGSDE--GERGTKGSD 99
KG +G+ G KG D+GE+G +G G G +GSD
Sbjct: 2673 KGDRGFDGQPGPKG-DQGEKGERGPPGVGGFPGPRGSD 2709
Score = 102 (41.0 bits), Expect = 0.00096, P = 0.00096
Identities = 39/107 (36%), Positives = 56/107 (52%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGE--YVMKSSDEGERGMKGSD--EGERGMK 56
KG+ G + GE G G D G ++G DKG+ ++ +GERG+KG+ +GE+G K
Sbjct: 2577 KGEPGAAGIPGEPGSPGKD-GVPGVRG-DKGDVGFMGPRGLKGERGIKGACGLDGEKGDK 2634
Query: 57 GS--DEGERGMKG--SEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G G G+ G E GE G+ G G G +G +G+RG G
Sbjct: 2635 GEAGPPGRPGLAGRRGELGEPGVPGQ-AGAPGKEGLIGPKGDRGFDG 2680
>UNIPROTKB|F1SKM1 [details] [associations]
symbol:COL7A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005604 OMA:RRVCTTA GeneTree:ENSGT00700000104301
EMBL:CU633242 Ensembl:ENSSSCT00000012432 ArrayExpress:F1SKM1
Uniprot:F1SKM1
Length = 2939
Score = 146 (56.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 40/87 (45%), Positives = 52/87 (59%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
GERG KG D G +KG DKG+ + G RG KG D GERG +G D G++G +G +
Sbjct: 2496 GERGEKG-DAGSSGLKG-DKGDSAVTVGPPGPRGAKG-DMGERGPRGLD-GDKGPRG-DS 2550
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKG 97
G D GE+GTKG + G+RG+ G
Sbjct: 2551 G-------DPGEKGTKG-EPGDRGSAG 2569
Score = 128 (50.1 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 38/101 (37%), Positives = 52/101 (51%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGS 58
+KG G G +G + G+ ++G D G + EG RG+ G GERG KG
Sbjct: 2450 LKGDKGDPGAGPPGARG-ERGEPGVRGED-G----RPGPEGPRGLMGPPGGRGERGEKG- 2502
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
D G G+KG ++G+ + G RG KG D GERG +G D
Sbjct: 2503 DAGSSGLKG-DKGDSAVTVGPPGPRGAKG-DMGERGPRGLD 2541
Score = 116 (45.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/91 (42%), Positives = 48/91 (52%)
Query: 11 GERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G RG KG D G+ +G DKG S D GE+G KG + G+RG G G RG+ G
Sbjct: 2524 GPRGAKG-DMGERGPRGLDGDKGPRG-DSGDPGEKGTKG-EPGDRGSAGL-LGPRGLTGP 2579
Query: 69 EEGERGMKGSDEGERGTKGSD--EGERGTKG 97
+ GE G G G+ G+ G D G RG KG
Sbjct: 2580 K-GEPGAAGIP-GDPGSPGKDGVPGVRGDKG 2608
Score = 113 (44.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 38/100 (38%), Positives = 52/100 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G S +G G+KG+ +G+ GSD G+ K D G G+KG D GE G +G D G
Sbjct: 2094 GSGLSRDQGPPGLKGA-KGE---PGSD-GDRGPKG-DRGMPGIKG-DRGEPGQRGHD-GS 2145
Query: 63 RGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGS 98
G+ G E G G++G +G RG G G+ G G+
Sbjct: 2146 PGLPG-ERGVAGLEGKPGPQGPRGVPGPVGGHGDPGPPGA 2184
Score = 113 (44.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 38/105 (36%), Positives = 52/105 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG-SDEGE 62
KG GERG G +G G D G + S G +G G GE+G KG S++G
Sbjct: 1396 KGEKGDRGERGPPGPGDGT-AAPG-DPGLPGLPGSP-GPQGPVGPP-GEKGEKGDSEDGA 1451
Query: 63 RGMKGSE--EGERGMKG--SDEGERGTKG-----SDEGERGTKGS 98
G+ G GERG++G D G +G +G + GE+G +GS
Sbjct: 1452 PGLPGQPGVPGERGLRGFPGDTGPKGDRGLTGAVGEPGEKGERGS 1496
Score = 108 (43.1 bits), Expect = 0.00022, P = 0.00022
Identities = 37/102 (36%), Positives = 52/102 (50%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+KG KG +G+RG KG D G +KG D+GE + D G G+ G + G G++G
Sbjct: 2106 LKGAKGEPGSDGDRGPKG-DRGMPGIKG-DRGEPGQRGHD-GSPGLPG-ERGVAGLEGKP 2161
Query: 60 --EGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G RG+ G G+ G G+ G G G +G G KG
Sbjct: 2162 GPQGPRGVPGPVGGHGDPGPPGAP-GLAGPSGP-QGPSGLKG 2201
Score = 107 (42.7 bits), Expect = 0.00028, P = 0.00028
Identities = 37/93 (39%), Positives = 44/93 (47%)
Query: 11 GERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG--ERG 64
GERG++G+ G KG D GE S G G KG D GE G G + G
Sbjct: 1651 GERGLRGAPGARGPVGEKGDQGDPGEDGRNGSP-GPSGSKG-DRGEPGPPGPPGRLVDTG 1708
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ E+GE G +G EG RG KG D G G G
Sbjct: 1709 LGAGEKGEPGDRGQ-EGPRGPKG-DPGPPGASG 1739
Score = 106 (42.4 bits), Expect = 0.00036, P = 0.00036
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 11 GERGMKGSDEGKYVMKG--SDKGEYVMKSS-DEGERGMKGSDEGERGMKGSDEGERGMKG 67
GE+G +G +G+ G G K + DE G+ D+G G+KG+ +GE G
Sbjct: 2060 GEKGERGEQQGRDGSPGLPGPPGPPGPKVAVDEIGSGLS-RDQGPPGLKGA-KGEPG--- 2114
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+G+RG KG D G G KG D GE G +G D
Sbjct: 2115 -SDGDRGPKG-DRGMPGIKG-DRGEPGQRGHD 2143
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 38/93 (40%), Positives = 49/93 (52%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDE--GERGMKGSDEGERGMKG--SDEGERGM 65
+G++G +G D G KG+ KGE + S G RG+ G +GE G G D G G
Sbjct: 2541 DGDKGPRG-DSGDPGEKGT-KGEPGDRGSAGLLGPRGLTGP-KGEPGAAGIPGDPGSPGK 2597
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G RG KG D G G +G +GERG KG+
Sbjct: 2598 DGVP-GVRGDKG-DVGFMGPRGL-KGERGVKGA 2627
Score = 105 (42.0 bits), Expect = 0.00046, P = 0.00046
Identities = 40/99 (40%), Positives = 51/99 (51%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD-----EGERG 64
+GERG+KG+ G KG DKGE G G KG + GE G+ G EG G
Sbjct: 2619 KGERGVKGAC-GLDGEKG-DKGE-AGPPGRPGLAGRKG-ELGEPGIPGPSGAPGKEGLIG 2674
Query: 65 MKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKGSD 99
KG +G+ G KG D+GE+G +G G G +GSD
Sbjct: 2675 PKGDRGFDGQPGPKG-DQGEKGERGPPGTGGFPGPRGSD 2712
>UNIPROTKB|I3LEF4 [details] [associations]
symbol:OTOL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
CTD:131149 OMA:PFENFTL EMBL:FP325304 RefSeq:XP_003358706.1
Ensembl:ENSSSCT00000024441 GeneID:100623105 KEGG:ssc:100623105
Uniprot:I3LEF4
Length = 474
Score = 134 (52.2 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 41/99 (41%), Positives = 58/99 (58%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSDEG 61
KG GERG KG ++G+ MKG +KG + EG+RG++G +G+ G+KG ++G
Sbjct: 238 KGYCGDSGERGGKG-EKGEVGMKG-EKGSKG-DTGTEGKRGLEGPPGAKGDLGIKG-EKG 293
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKGS 98
E G G G G KG + G +G +GS +G RG KGS
Sbjct: 294 ELGPPGLV-GPAGPKG-ELGSKGVRGSIGKKGSRGLKGS 330
Score = 117 (46.2 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/110 (38%), Positives = 56/110 (50%)
Query: 2 KG-KGRSVHEGERGMKGSDEGK-YVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS- 58
KG KG +GERG +G++ Y K + G K D G G+ G +G++G KG
Sbjct: 145 KGQKGEKGLKGERGDQGTNGVPGYPGKPGEPGGLGPKG-DRGNIGLAGV-KGQKGSKGDT 202
Query: 59 -------DEGERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKG 97
D+G+ G G+ GE G KG ++GE G KG D GERG KG
Sbjct: 203 CANGTKGDKGDGGAMGAPGLNGEPGAKG-EKGEVGDKGYCGDSGERGGKG 251
>UNIPROTKB|F1P5B5 [details] [associations]
symbol:OTOL1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
OMA:PFENFTL EMBL:AADN02021061 IPI:IPI00591329
Ensembl:ENSGALT00000015499 Uniprot:F1P5B5
Length = 395
Score = 132 (51.5 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 43/105 (40%), Positives = 59/105 (56%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMK 56
KG KG + G +G KG D G + G DKGE D G++G G + G RG K
Sbjct: 122 KGSKGDTCENGTKGDKGDRGDVGDPGVGGEQGDKGE----KGDTGDKGYCG-EPGGRGPK 176
Query: 57 GSDEGERGMKGSEEGERGMKGS--DEGERGTKGS--DEGERGTKG 97
G ERG+ G++ GE+G KG DEG +G +G ++GE+G+KG
Sbjct: 177 G----ERGIGGTK-GEKGSKGEMGDEGVQGAEGKQGEKGEQGSKG 216
Score = 131 (51.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 42/101 (41%), Positives = 56/101 (55%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG KG +GERG GS G Y K +GE +K + +G G G +G++G KG D
Sbjct: 74 KGFKGERGEQGERGTSGSP-G-YPGKPGLQGEAGVKGN-KGNYGFPGL-KGQKGSKG-DT 128
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
E G KG ++G+RG G D G G +G D+GE+G G Y
Sbjct: 129 CENGTKG-DKGDRGDVG-DPGVGGEQG-DKGEKGDTGDKGY 166
Score = 124 (48.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/93 (41%), Positives = 56/93 (60%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEGERGMKG 67
+GERG+ G+ +G+ KGS KGE DEG +G +G ++GE+G KG D+G+ G G
Sbjct: 176 KGERGIGGT-KGE---KGS-KGEM----GDEGVQGAEGKQGEKGEQGSKG-DKGDLGPAG 225
Query: 68 --SEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G +G+ GS +G RG G +G RG KG+
Sbjct: 226 VTGPSGPKGVAGS-KGGRGAPGR-KGARGAKGA 256
Score = 94 (38.1 bits), Expect = 0.00065, P = 0.00065
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGS 58
KG KG G+ G++G+ EGK +G +KGE K D+G+ G G G +G+ GS
Sbjct: 185 KGEKGSKGEMGDEGVQGA-EGK---QG-EKGEQGSKG-DKGDLGPAGVTGPSGPKGVAGS 238
Query: 59 DEGERGMKGSEEGERGMKGS 78
+G RG G +G RG KG+
Sbjct: 239 -KGGRGAPG-RKGARGAKGA 256
>UNIPROTKB|Q02388 [details] [associations]
symbol:COL7A1 "Collagen alpha-1(VII) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0005604 "basement membrane" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005590 "collagen type VII"
evidence=TAS] [GO:0008544 "epidermis development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS] [GO:0031012
"extracellular matrix" evidence=ISS] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
PROSITE:PS50853 SMART:SM00060 SMART:SM00327 Reactome:REACT_118779
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867 SUPFAM:SSF49265
GO:GO:0030198 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0005788 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0008544 GO:GO:0005604
EMBL:L23982 EMBL:L02870 EMBL:D13694 EMBL:M96984 EMBL:S51236
EMBL:M65158 EMBL:L06862 IPI:IPI00025418 IPI:IPI00795118 PIR:A54849
RefSeq:NP_000085.1 UniGene:Hs.476218 ProteinModelPortal:Q02388
SMR:Q02388 IntAct:Q02388 MINT:MINT-1390694 STRING:Q02388
MEROPS:I02.967 PhosphoSite:Q02388 DMDM:1345650 PaxDb:Q02388
PRIDE:Q02388 Ensembl:ENST00000328333 Ensembl:ENST00000454817
GeneID:1294 KEGG:hsa:1294 UCSC:uc003ctz.2 CTD:1294
GeneCards:GC03M048576 HGNC:HGNC:2214 HPA:CAB016357 MIM:120120
MIM:131705 MIM:131750 MIM:131850 MIM:132000 MIM:226600 MIM:604129
MIM:607523 neXtProt:NX_Q02388 Orphanet:158673 Orphanet:79407
Orphanet:216989 Orphanet:79408 Orphanet:89842 Orphanet:89841
Orphanet:79409 Orphanet:89839 Orphanet:158676 Orphanet:79410
Orphanet:89843 Orphanet:79411 PharmGKB:PA26730 HOGENOM:HOG000111866
HOVERGEN:HBG051053 InParanoid:Q02388 KO:K16628 OMA:RRVCTTA
OrthoDB:EOG4J117P PhylomeDB:Q02388 ChiTaRS:COL7A1 GenomeRNAi:1294
NextBio:5251 ArrayExpress:Q02388 Bgee:Q02388 CleanEx:HS_COL7A1
Genevestigator:Q02388 GermOnline:ENSG00000114270 GO:GO:0005590
Uniprot:Q02388
Length = 2944
Score = 142 (55.0 bits), Expect = 5.5e-08, P = 5.5e-08
Identities = 42/101 (41%), Positives = 58/101 (57%)
Query: 1 MKGK-GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG 57
++G+ GR EG RG+ G G+ KG D G +K D+G+ + G RG KG
Sbjct: 2479 IRGEDGRPGQEGPRGLTGPPGSRGERGEKG-DVGSAGLKG-DKGDSAVILGPPGPRGAKG 2536
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
D GERG +G + G++G +G D G+ G KGS +GE G KGS
Sbjct: 2537 -DMGERGPRGLD-GDKGPRG-DNGDPGDKGS-KGEPGDKGS 2573
Score = 136 (52.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 39/96 (40%), Positives = 52/96 (54%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS-- 68
GERG KG D G +KG DKG+ + G RG KG D GERG +G D G++G +G
Sbjct: 2502 GERGEKG-DVGSAGLKG-DKGDSAVILGPPGPRGAKG-DMGERGPRGLD-GDKGPRGDNG 2557
Query: 69 EEGERGMKGS--DEGERGTKG-----SDEGERGTKG 97
+ G++G KG D+G G G +G+ G G
Sbjct: 2558 DPGDKGSKGEPGDKGSAGLPGLRGLLGPQGQPGAAG 2593
Score = 123 (48.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 39/100 (39%), Positives = 53/100 (53%)
Query: 11 GERGMKGSDEGK--YVMKG--SDKGEYVMKSSD-----EGERGMKG--SDEGERGMKGSD 59
G G+KG D+G + G ++GE ++ D EG RG+ G GERG KG D
Sbjct: 2452 GASGLKG-DKGDPGVGLPGPRGERGEPGIRGEDGRPGQEGPRGLTGPPGSRGERGEKG-D 2509
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G G+KG ++G+ + G RG KG D GERG +G D
Sbjct: 2510 VGSAGLKG-DKGDSAVILGPPGPRGAKG-DMGERGPRGLD 2547
Score = 115 (45.5 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 39/108 (36%), Positives = 56/108 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSS-DEGERGMKGSDEGERGMKGSDE 60
+G +GERG +G D G + G+ G K S DE G+ G ++G G+KG+ +
Sbjct: 2060 RGERGEKGERGEQGRD-GPPGLPGTPGPPGPPGPKVSVDEPGPGLSG-EQGPPGLKGA-K 2116
Query: 61 GERGMKGSE--EGERGMKG--SDEGERGTKGSD-----EGERGTKGSD 99
GE G G + +G+RG+ G D GE G +G D GERG G +
Sbjct: 2117 GEPGSNGDQGPKGDRGVPGIKGDRGEPGPRGQDGNPGLPGERGMAGPE 2164
Score = 113 (44.8 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 37/91 (40%), Positives = 51/91 (56%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GERG+KG+ G KG DKGE + G G+ G +GE G G G+ G G E
Sbjct: 2625 KGERGVKGAC-GLDGEKG-DKGE----AGPPGRPGLAGH-KGEMGEPGVP-GQSGAPGKE 2676
Query: 70 E--GERGMKGSDEGERGTKGSDEGERGTKGS 98
G +G +G D G+ G KG D+GE+G +G+
Sbjct: 2677 GLIGPKGDRGFD-GQPGPKG-DQGEKGERGT 2705
Score = 110 (43.8 bits), Expect = 0.00014, P = 0.00014
Identities = 39/102 (38%), Positives = 50/102 (49%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--- 59
G G S +G G+KG+ +G+ G D+G D G G+KG D GE G +G D
Sbjct: 2100 GPGLSGEQGPPGLKGA-KGEPGSNG-DQGP----KGDRGVPGIKG-DRGEPGPRGQDGNP 2152
Query: 60 --EGERGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKG 97
GERGM G E G+ G++G G G G D G G G
Sbjct: 2153 GLPGERGMAGPE-GKPGLQGP-RGPPGPVGGHGDPGPPGAPG 2192
Score = 106 (42.4 bits), Expect = 0.00036, P = 0.00036
Identities = 39/93 (41%), Positives = 49/93 (52%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKG--SDEGERGM 65
+G++G +G D G KGS KGE K S G RG+ G +G+ G G D G G
Sbjct: 2547 DGDKGPRG-DNGDPGDKGS-KGEPGDKGSAGLPGLRGLLGP-QGQPGAAGIPGDPGSPGK 2603
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G RG KG D G G +G +GERG KG+
Sbjct: 2604 DGVP-GIRGEKG-DVGFMGPRGL-KGERGVKGA 2633
>UNIPROTKB|A6NHN0 [details] [associations]
symbol:OTOL1 "Otolin-1" species:9606 "Homo sapiens"
[GO:0005581 "collagen" evidence=IEA] InterPro:IPR008983
HOGENOM:HOG000085653 HOVERGEN:HBG108220 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 eggNOG:NOG122858 OrthoDB:EOG48PMM8
EMBL:AC104471 IPI:IPI00477692 RefSeq:NP_001073909.1
UniGene:Hs.585021 ProteinModelPortal:A6NHN0 SMR:A6NHN0
STRING:A6NHN0 PhosphoSite:A6NHN0 PaxDb:A6NHN0 PRIDE:A6NHN0
Ensembl:ENST00000327928 GeneID:131149 KEGG:hsa:131149
UCSC:uc011bpb.2 CTD:131149 GeneCards:GC03P161214 HGNC:HGNC:34071
HPA:HPA041030 neXtProt:NX_A6NHN0 InParanoid:A6NHN0 OMA:PFENFTL
GenomeRNAi:131149 NextBio:82878 Genevestigator:A6NHN0
Uniprot:A6NHN0
Length = 477
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 42/100 (42%), Positives = 52/100 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDEG 61
KG +G G G G KG +KGE ++GE G KG D GERG KG +G
Sbjct: 205 KGEKGDQGAMGSPGLHGGPGA-KG-EKGEM----GEKGEMGDKGCCGDSGERGGKGQ-KG 257
Query: 62 ERGMKGSE--EGERGMKGSD--EGERGTKGSDEGERGTKG 97
E GMKG + +G+ GM+G G G KG D G +G KG
Sbjct: 258 EGGMKGEKGSKGDSGMEGKSGRNGLPGAKG-DPGIKGEKG 296
Score = 126 (49.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 41/102 (40%), Positives = 55/102 (53%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
M KG GERG KG +G+ MKG KG+ M+ G G+ G+ +G+ G+KG
Sbjct: 238 MGDKGCCGDSGERGGKGQ-KGEGGMKGEKGSKGDSGMEGKS-GRNGLPGA-KGDPGIKG- 293
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
++GE G G G G KG D G +G +G +G RG KGS
Sbjct: 294 EKGELGPPGLL-GPTGPKG-DIGNKGVRGPTGKKGSRGFKGS 333
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/92 (39%), Positives = 52/92 (56%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKG 67
+G++G KG G KG +KG+ S G G KG ++GE G KG + G++G G
Sbjct: 190 KGQKGSKGDTCGNCT-KG-EKGDQGAMGSPGLHGGPGAKG-EKGEMGEKG-EMGDKGCCG 245
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+ GERG KG +GE G KG ++G +G G +
Sbjct: 246 -DSGERGGKGQ-KGEGGMKG-EKGSKGDSGME 274
Score = 114 (45.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 4 KGRSVHEGERGMKGS--DEGK--YVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+G ++GE+G+KG D+G Y K +GE K D+G G+ G +G++G KG
Sbjct: 142 QGPRGYKGEKGLKGERGDQGVPGYPGKPGAQGEPGPKG-DKGNIGL-GGVKGQKGSKGDT 199
Query: 60 EGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
G KG E+G++G GS G G KG ++GE G KG
Sbjct: 200 CGNC-TKG-EKGDQGAMGSPGLHGGPGAKG-EKGEMGEKG 236
>UNIPROTKB|F1NDC7 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 GeneTree:ENSGT00640000091447
EMBL:AADN02016911 IPI:IPI00578006 Ensembl:ENSGALT00000037894
Uniprot:F1NDC7
Length = 476
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 40/101 (39%), Positives = 54/101 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKG--SDEGERGMKGSDE 60
GR H+GERG G +G +KG D+G ++ +G+RG G ++GE+GMKG
Sbjct: 150 GRPGHKGERGPPGL-QGPPGIKG-DQGIQGLQGLQGSKGDRGPAGPRGEQGEQGMKGQ-A 206
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G G G ++GE G KG D G RG G G +G G Y
Sbjct: 207 GIPGPTG-QKGEMGQKG-DPGIRGPMGPP-GHQGVPGQPGY 244
Score = 126 (49.4 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G++G KG D G G G K ++G+RG+ G+ EG++G+KG D+G G +G
Sbjct: 278 GQKGEKG-DLGPRGFPGVT-GSLGPKG-EKGDRGVPGT-EGQKGIKG-DQGLPGSQGPT- 331
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G++G KG D G +G KG + G +G KG Y
Sbjct: 332 GQKGSKG-DYGSKGLKG-EPGLKGAKGDKGY 360
Score = 116 (45.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G +G+RG+ G+ EG+ +KG D+G + S +G G KGS +G+ G KG +GE G
Sbjct: 299 GPKGEKGDRGVPGT-EGQKGIKG-DQG---LPGS-QGPTGQKGS-KGDYGSKGL-KGEPG 350
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERG 94
+KG++ G++G G GTKGS +GE+G
Sbjct: 351 LKGAK-GDKGYPGPP----GTKGS-KGEQG 374
Score = 99 (39.9 bits), Expect = 0.00024, P = 0.00024
Identities = 35/104 (33%), Positives = 50/104 (48%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKG-- 57
KG +G+ G++G G + G G Y + + G G KG GERG G
Sbjct: 215 KGEMGQKGDPGIRGPMGPPGHQGVPGQP-G-YNGNAGEPGRPGQKGEAGPAGERGPPGPP 272
Query: 58 --SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
S G++G KG + G RG G G G KG ++G+RG G++
Sbjct: 273 GPSSPGQKGEKG-DLGPRGFPGVT-GSLGPKG-EKGDRGVPGTE 313
>ZFIN|ZDB-GENE-110728-4 [details] [associations]
symbol:col5a3b "collagen, type V, alpha 3b"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-110728-4 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 HOGENOM:HOG000085654 SMART:SM00210
EMBL:GQ485669 IPI:IPI00961572 RefSeq:NP_001177687.1
UniGene:Dr.88476 GeneID:100463515 KEGG:dre:100463515 CTD:100463515
Uniprot:D6MUD7
Length = 1723
Score = 135 (52.6 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 9 HEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGS--DEGERGMKGSD--EGE 62
+ G RG+KG+D G +KGS +KGE + +GE G KG D G +GM+G D EG
Sbjct: 665 YPGARGVKGAD-GLRGLKGSKGEKGEDGFPGA-KGEMGAKGDNGDAGAQGMRGEDGPEGP 722
Query: 63 RGMKG--SEEGERGMKGSDEGERGTKGSD--EGERGTKGSDDY 101
+G G E G G+ G ++G+ G G G +G KG D +
Sbjct: 723 KGQSGPLGEPGPAGIAG-EKGKLGVPGLPGYPGRQGQKGGDGF 764
Score = 123 (48.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G +G++GMKG +G G + GE + + G +G G G RG+KG+D
Sbjct: 619 GEKGPQGKKGMKGLPGVDGPPGHPGREGPPGEKGLPGA-AGVQGPVGYP-GARGVKGAD- 675
Query: 61 GERGMKGS--EEGERGMKGSDEGERGTKGS--DEGERGTKGSD 99
G RG+KGS E+GE G G+ +GE G KG D G +G +G D
Sbjct: 676 GLRGLKGSKGEKGEDGFPGA-KGEMGAKGDNGDAGAQGMRGED 717
Score = 113 (44.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 41/97 (42%), Positives = 48/97 (49%)
Query: 11 GERGMKGSDEGKYVMKGS--DKGEY-----VMKSSDEGERGMKGSDEGERGMKGSDEGER 63
GE G KG + G KGS DKGE V EG+ G G D GE G G +G
Sbjct: 1030 GEDGDKG-ETGAPGQKGSKGDKGESGPPGPVGSQGPEGQPGAPGVD-GEVGPTGQ-QGMY 1086
Query: 64 GMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
G KG +EG RG KGS G G +G GE+G G+
Sbjct: 1087 GQKG-DEGARGFKGS-RGPGGLQGMPGPPGEKGESGN 1121
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 42/103 (40%), Positives = 53/103 (51%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS-- 58
KG KG S G G +G EG+ G D GE V + +G G KG DEG RG KGS
Sbjct: 1047 KGDKGESGPPGPVGSQGP-EGQPGAPGVD-GE-VGPTGQQGMYGQKG-DEGARGFKGSRG 1102
Query: 59 DEGERGMKG--SEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G +GM G E+GE G G G+ G +G+ +G G +G
Sbjct: 1103 PGGLQGMPGPPGEKGESGNSGLLGPPGQFGPRGA-QGPSGGQG 1144
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 38/100 (38%), Positives = 50/100 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKG--SDE 60
G+ +G G+ G+ G G D KGE + G++G KG D+GE G G +
Sbjct: 1009 GQDGEQGPVGLPGA-AGPPGPPGEDGDKGE----TGAPGQKGSKG-DKGESGPPGPVGSQ 1062
Query: 61 GERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G G+ +GE G G +G G KG DEG RG KGS
Sbjct: 1063 GPEGQPGAPGVDGEVGPTGQ-QGMYGQKG-DEGARGFKGS 1100
Score = 100 (40.3 bits), Expect = 0.00089, P = 0.00089
Identities = 34/93 (36%), Positives = 47/93 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G++ G+RG G D G+ + GE +K D G G+ G G +G +G D G++G
Sbjct: 478 GQNGKPGKRGRGGMDGGR-----GEPGETGVKG-DRGFDGLPGLP-GNKGHRG-DTGKKG 529
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G G KGSD G+ G +G GE G G
Sbjct: 530 PVGPP-GAPGEKGSD-GQPGPRGQS-GEPGLAG 559
Score = 100 (40.3 bits), Expect = 0.00089, P = 0.00089
Identities = 39/99 (39%), Positives = 47/99 (47%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDE 60
G+G G RG G G+ KG D GE S D G G+ GS ++GE+G KG D
Sbjct: 1142 GQGPPGRPGVRGQPGG-VGE---KGED-GE----SGDPGAVGVSGSAGEKGEQGEKG-DT 1191
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G G GS G RG G D G +G G G+ G G
Sbjct: 1192 GPPGAAGSA-GARGASGED-GAKGNGGPIGLPGDMGAPG 1228
Score = 100 (40.3 bits), Expect = 0.00089, P = 0.00089
Identities = 37/96 (38%), Positives = 47/96 (48%)
Query: 3 GK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
GK G H G+RG G +GK G G V + GE G G + G G G G
Sbjct: 847 GKDGLPGHPGQRGEPGF-QGKTGPPGPT-G-VVGPQGNTGETGPMG-ERGHPGSPGP-AG 901
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G+ G+ G+ G KG D G +GT G + G G KG
Sbjct: 902 EQGLPGAA-GKEGSKG-DPGGQGTSGKN-GPTGLKG 934
Score = 100 (40.3 bits), Expect = 0.00089, P = 0.00089
Identities = 35/107 (32%), Positives = 53/107 (49%)
Query: 1 MKGKGRSVHEGERGMKGSD--EGKYVMKG--SDKGEYVMKSSDEGERGMKGSD--EGERG 54
M KG + G +GM+G D EG G + G + + ++G+ G+ G G +G
Sbjct: 699 MGAKGDNGDAGAQGMRGEDGPEGPKGQSGPLGEPGPAGI-AGEKGKLGVPGLPGYPGRQG 757
Query: 55 MKGSD--EGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
KG D G G+ G E+G++G G G+RG G+ G RG +G
Sbjct: 758 QKGGDGFPGAVGVPG-EKGKKGPPGPAGAAGQRGPNGA-RGARGARG 802
>RGD|1560136 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10116 "Rattus norvegicus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005929
"cilium" evidence=ISO] [GO:0007601 "visual perception"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0042384 "cilium assembly" evidence=ISO] [GO:0042462 "eye
photoreceptor cell development" evidence=ISO] RGD:1560136
EMBL:AY855168 IPI:IPI00361392 UniGene:Rn.103641 UniGene:Rn.215816
UCSC:RGD:1560136 Genevestigator:Q56PB7 Uniprot:Q56PB7
Length = 572
Score = 129 (50.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 35/99 (35%), Positives = 51/99 (51%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G G EGE +G +EG+ +G + E + EGE +G +EGE +G EG
Sbjct: 331 EGGGEEEWEGEEEGQGEEEGEGEEEGGGEEEGGGEEEGEGEEEGEGEEEGEGEEEG--EG 388
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E +G EEGE +G EGE +G EGE +G ++
Sbjct: 389 EEEGEGEEEGEGEEEG--EGEEEGQGEGEGEEEGEGEEE 425
Score = 117 (46.2 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 34/99 (34%), Positives = 49/99 (49%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G G GE +G +EG+ G ++GE + E E G + EGE +G +EG
Sbjct: 325 EGGGEEEGGGEEEWEGEEEGQ----GEEEGEGEEEGGGEEEGGGEEEGEGEEEGEGEEEG 380
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E G EEGE +G EGE +G +EGE +G +
Sbjct: 381 E----GEEEGEGEEEG--EGEEEGEGEEEGEGEEEGQGE 413
Score = 116 (45.9 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 33/102 (32%), Positives = 51/102 (50%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G+G EGE +G +EG+ +G + E + EGE +G EGE +G +E
Sbjct: 367 EGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGEGEEEGQGEGEGEEEGEGEEEK 426
Query: 62 ERGMKGSEEGERGMKGSD----EGERGTKGSDEGERGTKGSD 99
E+G + E + G + EGE GT+ DE E G +G +
Sbjct: 427 EKGEEEEVEDDGADDGEELEDKEGE-GTEEEDE-EEGQEGEE 466
Score = 114 (45.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 33/95 (34%), Positives = 49/95 (51%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD-E 60
KGKG+ H + KG DEG KG + GE + ++ E + +E E G +GS+ E
Sbjct: 93 KGKGKQSHILDMEGKGEDEGWE--KGGEGGEKMERNEGNREERNQEMEEREAGDEGSEKE 150
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGT 95
E + EE E + + E+G +G +EGE GT
Sbjct: 151 DEEKEEEEEEEEEEEEEENPEEKGEEGQEEGE-GT 184
Score = 113 (44.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 33/91 (36%), Positives = 48/91 (52%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G G EGE +G +EG+ G ++GE + EGE +G +EGE +G EG
Sbjct: 361 EGGGEEEGEGEEEGEGEEEGE----GEEEGEG--EEEGEGEEEGEGEEEGEGEEEGQGEG 414
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGE 92
E +G E E+ KG +E E G+D+GE
Sbjct: 415 EGEEEGEGEEEKE-KGEEE-EVEDDGADDGE 443
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 34/99 (34%), Positives = 49/99 (49%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G EG+R +G +EG +G + E + EGE +G +EGE +G E
Sbjct: 301 EGEGEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQGEEEGEGEEEGGGEE 360
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E G G EEGE +G EGE +G +EGE +G +
Sbjct: 361 EGG--GEEEGEGEEEG--EGEEEGEGEEEGEGEEEGEGE 395
Score = 111 (44.1 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGS-DKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
+G G EGE +EG+ +G ++ E + EGE G +G +EG+R +G E
Sbjct: 259 EGGGEEEEEGEEEGGEEEEGEGEEEGGGEEEEEGEEEGGEGEEG-EGEEEGDREEEGGGE 317
Query: 61 GERGMKGSEEG----ERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E G G EEG E G + EGE +G +EGE +G +
Sbjct: 318 EEGG--GEEEGGGEEEGGGEEEWEGEEEGQGEEEGEGEEEGGGE 359
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 31/95 (32%), Positives = 49/95 (51%)
Query: 8 VHEGERGMKGSDEGKYVMKGSDKGEYV-MKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ EGE +G +EG +G ++ E ++ E E G + +EGE +EGE +
Sbjct: 224 IEEGEEEGEGEEEGGEEEEGEEEEEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEGEEE 283
Query: 67 GS-EEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G EE E G + EGE G +G +EG+R +G +
Sbjct: 284 GGGEEEEEGEEEGGEGEEG-EGEEEGDREEEGGGE 317
Score = 110 (43.8 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 33/101 (32%), Positives = 49/101 (48%)
Query: 2 KGKGRSVHEGERGMKGSDEG--KYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+G G GE G +EG + +G ++G+ +EGE +G E E G +
Sbjct: 313 EGGGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQ----GEEEGEGEEEGGGEEEGGGEEEG 368
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
EGE +G EEGE +G EGE +G +EGE +G +
Sbjct: 369 EGEEEGEGEEEGEGEEEG--EGEEEGEGEEEGEGEEEGEGE 407
Score = 108 (43.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 31/93 (33%), Positives = 45/93 (48%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDE--GERGMKGSDEGERGMKG 67
EGE G +G +EG +G + E + GE G +E GE +G +EGE +G
Sbjct: 298 EGEEG-EGEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEEWEGEEEGQGEEEGEGEEEG 356
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E E G + EGE +G +EGE +G +
Sbjct: 357 GGEEEGGGEEEGEGEEEGEGEEEGEGEEEGEGE 389
Score = 106 (42.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 2 KGKGRSVHEGER-GMKGSDEGKYVMKGSDKGEYVMKSSDEGERG--MKGSDEGERGMKGS 58
+G G EGE G +G +EG+ G ++G+ + E E G +G E E G +
Sbjct: 283 EGGGEEEEEGEEEGGEG-EEGE----GEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEE 337
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
EGE +G EEGE +G E E G + EGE +G ++
Sbjct: 338 WEGEEEGQGEEEGEGEEEGGGEEEGGGEEEGEGEEEGEGEEE 379
Score = 102 (41.0 bits), Expect = 0.00015, P = 0.00015
Identities = 32/101 (31%), Positives = 51/101 (50%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G+G EGE +G +EG+ +G +GE + EGE + +E E G+D+G
Sbjct: 385 EGEGEEEGEGEEEGEGEEEGEGEEEGQGEGEG--EEEGEGEEEKEKGEEEEVEDDGADDG 442
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
E +EGE G + DE E G +G + + G +D+V
Sbjct: 443 EE--LEDKEGE-GTEEEDE-EEGQEGEEREKHGR--CEDHV 477
Score = 101 (40.6 bits), Expect = 0.00019, P = 0.00019
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 4 KGRSVHEGERGMKGSDE---GKYVMKGSDK--GEYVMKSSDEGERGMKGS-DEGERGMKG 57
+G EGE +G E G+ G ++ GE +EGE +G +E E G +
Sbjct: 236 EGGEEEEGEEEEEGGGEEAGGEEEGGGEEEEEGEEEGGEEEEGEGEEEGGGEEEEEGEEE 295
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
EGE G +G EEG+R +G E E G + GE G +++
Sbjct: 296 GGEGEEG-EGEEEGDREEEGGGEEEGGGEEEGGGEEEGGGEEEW 338
Score = 98 (39.6 bits), Expect = 0.00040, P = 0.00040
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERG--MKGSD 59
+G+G GE +G +EG +G ++GE +EG+R +G E E G +G
Sbjct: 277 EGEGEEEGGGEEEEEGEEEGG---EG-EEGE----GEEEGDREEEGGGEEEGGGEEEGGG 328
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
E E G + EGE +G +EGE +G E E G
Sbjct: 329 EEEGGGEEEWEGEEEGQGEEEGEGEEEGGGEEEGG 363
Score = 97 (39.2 bits), Expect = 0.00051, P = 0.00051
Identities = 32/104 (30%), Positives = 49/104 (47%)
Query: 2 KGKGRSVHEGERGMKGSDE---GKYVMKGSDKGEYVMKSSDE--GERGMKGSDEGERGMK 56
K GR EG+ K +E + + +G ++GE + +E GE +G E E G +
Sbjct: 199 KEGGREEKEGQEDEKEREELEREEEIEEGEEEGEGEEEGGEEEEGEEEEEGGGE-EAGGE 257
Query: 57 GSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGER-GTKGSD 99
GE +G EEG +G E E G + +EGE G +G +
Sbjct: 258 EEGGGEEEEEGEEEGGEEEEGEGEEEGGGEEEEEGEEEGGEGEE 301
>FB|FBgn0016075 [details] [associations]
symbol:vkg "viking" species:7227 "Drosophila melanogaster"
[GO:0005581 "collagen" evidence=IEA;NAS] [GO:0005587 "collagen type
IV" evidence=NAS] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IDA] [GO:0007519 "skeletal muscle tissue development"
evidence=IMP] [GO:0061327 "anterior Malpighian tubule development"
evidence=IMP] [GO:0007443 "Malpighian tubule morphogenesis"
evidence=IMP] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 EMBL:AE014134 GO:GO:0005811 InterPro:IPR016187
SUPFAM:SSF56436 InterPro:IPR008160 Pfam:PF01391 GO:GO:0007443
GO:GO:0007519 GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
KO:K06237 GeneTree:ENSGT00700000104270 GO:GO:0061327 HSSP:P02462
FlyBase:FBgn0016075 RefSeq:NP_477190.1 UniGene:Dm.4714
ProteinModelPortal:Q9VMV5 SMR:Q9VMV5 IntAct:Q9VMV5 MINT:MINT-896863
STRING:Q9VMV5 PRIDE:Q9VMV5 EnsemblMetazoa:FBtr0079036
EnsemblMetazoa:FBtr0333540 EnsemblMetazoa:FBtr0333541 GeneID:33726
KEGG:dme:Dmel_CG16858 UCSC:CG16858-RA CTD:33726 InParanoid:Q9VMV5
OMA:TYIVDNI PhylomeDB:Q9VMV5 GenomeRNAi:33726 NextBio:784974
ArrayExpress:Q9VMV5 Bgee:Q9VMV5 Uniprot:Q9VMV5
Length = 1940
Score = 135 (52.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 41/90 (45%), Positives = 50/90 (55%)
Query: 11 GERGMKGSDEGKYVMKGS-DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
G+ G G D GK + GS KGE + + D G RG G D+GE+G GSD G KG E
Sbjct: 591 GKVGAAGPD-GKAIEVGSLRKGE-IGDTGDSGHRGDTG-DDGEKGRDGSD----GSKG-E 642
Query: 70 EGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G D G+ G +G D GE G G D
Sbjct: 643 RGETGQRG-DYGDAGYQGRD-GEPGRDGRD 670
Score = 107 (42.7 bits), Expect = 0.00018, P = 0.00018
Identities = 36/102 (35%), Positives = 52/102 (50%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG G+ G++G D G+ + G DKG + G G +G G RG+ G D+G
Sbjct: 454 KGEPGLNGQPGLEGYRGDRGEVGLPG-DKGLPGEGYNIVGPPGSQGPP-GFRGLPG-DDG 510
Query: 62 ERGMKGSEEGERGMKGSD-----EGERGTKGSDEGERGTKGS 98
G++G GE+G++G D G RG +G EG+ G GS
Sbjct: 511 YNGLRGLP-GEKGLRGDDCPVCNAGPRGPRGQ-EGDTGYPGS 550
Score = 104 (41.7 bits), Expect = 0.00038, P = 0.00038
Identities = 36/99 (36%), Positives = 48/99 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + +GE+G GSD K ++GE + D G+ G +G D GE G G D G
Sbjct: 622 RGDTGDDGEKGRDGSDGSK-----GERGETGQRG-DYGDAGYQGRD-GEPGRDGRD-GAP 673
Query: 64 GMKGSEE-----GERGMKGSDEGERGTKGSDEGERGTKG 97
G + GE G G +GERG G D G +G KG
Sbjct: 674 GRNATTPKVYLIGEPGYDGI-KGERGDDG-DTGFKGVKG 710
>UNIPROTKB|F1RY09 [details] [associations]
symbol:F1RY09 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016020 "membrane" evidence=IEA] [GO:0005044 "scavenger
receptor activity" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 OMA:WVRVSHE
GeneTree:ENSGT00640000091447 EMBL:CU694946
Ensembl:ENSSSCT00000017116 Uniprot:F1RY09
Length = 501
Score = 128 (50.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 38/86 (44%), Positives = 52/86 (60%)
Query: 11 GERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G G+KGS D G KG+ KGE S G G+KG ++G RG++GS G G+ G
Sbjct: 325 GAEGLKGSKGDTGLQGQKGT-KGE----SGFPGPAGLKG-EKGSRGLEGS-RGAPGL-GG 376
Query: 69 EEGERGMKGSDEGERGTKGSDEGERG 94
++GE G KGS G +G KG+ +GE+G
Sbjct: 377 QKGEPGAKGSS-GLQGAKGA-KGEKG 400
Score = 107 (42.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 41 GERGMKGS--DEGERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERG 94
G G+KGS D G +G KG+ +GE G G +GE+G +G EG RG G +GE G
Sbjct: 325 GAEGLKGSKGDTGLQGQKGT-KGESGFPGPAGLKGEKGSRGL-EGSRGAPGLGGQKGEPG 382
Query: 95 TKGS 98
KGS
Sbjct: 383 AKGS 386
Score = 104 (41.7 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 36/103 (34%), Positives = 51/103 (49%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G H+G+ GM GS G +KG D+G+ G G+ G+ G G KG + G
Sbjct: 256 GARGHKGDLGMPGSPGVAGVPGLKG-DQGQ----PGTRGLPGLPGA-AGSPGAKG-EPGS 308
Query: 63 RGMKGSEEGERGMKGSD--EGERGTKGSD--EGERGTKGSDDY 101
G+ G G G GS EG +G+KG +G++GTKG +
Sbjct: 309 PGLTGPT-GPAGSPGSPGAEGLKGSKGDTGLQGQKGTKGESGF 350
Score = 101 (40.6 bits), Expect = 0.00016, P = 0.00016
Identities = 39/104 (37%), Positives = 51/104 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSD--EGERGMKGSDEGERGMKG--- 57
G S +G+ GMKG D G G+ KG+ M S G G+KG D+G+ G +G
Sbjct: 235 GFSGRKGDMGMKG-DMGLMGPPGARGHKGDLGMPGSPGVAGVPGLKG-DQGQPGTRGLPG 292
Query: 58 --SDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G G KG E G G+ G G G+ GS EG +G+KG
Sbjct: 293 LPGAAGSPGAKG-EPGSPGLTGPT-GPAGSPGSPGAEGLKGSKG 334
>ZFIN|ZDB-GENE-030131-9861 [details] [associations]
symbol:col7a1l "collagen type VII alpha 1-like"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR002035 InterPro:IPR003961 Pfam:PF00041 Pfam:PF00092
PROSITE:PS50234 PROSITE:PS50853 SMART:SM00060 SMART:SM00327
ZFIN:ZDB-GENE-030131-9861 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00700000104301 EMBL:BX004864 IPI:IPI00496156
Ensembl:ENSDART00000141566 Uniprot:F1QKQ2
Length = 1722
Score = 134 (52.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 41/98 (41%), Positives = 52/98 (53%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG S G G+ G +G KG DKGE + + G G++G D G G+KG D G
Sbjct: 1406 KGESGERGNVGLSGKPGPKGNDGSKG-DKGEIGLPGTS-GSPGLRGKD-GVPGLKG-DTG 1461
Query: 62 ERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKG 97
RG GS E G+RG+KG EG +G KG + G G G
Sbjct: 1462 SRGEPGSRGEPGDRGVKGP-EGHKGLKG-EPGLPGPPG 1497
Score = 130 (50.8 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 41/103 (39%), Positives = 56/103 (54%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSD--EGERGMKGSDE 60
G+ +G G+ GS +G+ KG KGE D G G+ G G G G D
Sbjct: 1554 GKDGLDGLPGIPGS-KGEAGQKGEPGSKGE----KGDHGRAGITGMPGLPGTPGKPGVD- 1607
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGS-----DEGERGTKGS 98
G+RG+ G ++GERG KG DEGE+G KG +EG++G +GS
Sbjct: 1608 GKRGVSG-KDGERGPKG-DEGEKGVKGEPGANGNEGQKGEQGS 1648
Score = 123 (48.4 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 38/105 (36%), Positives = 57/105 (54%)
Query: 4 KGRSVHEGERGMKGSD-EGKYVMKGS--DKGEYVM--KSSDEGERGMKGSDEGERGMKGS 58
KG +GE+G G G+ KG ++G + K +G G KG D+GE G+ G+
Sbjct: 1383 KGDRGDKGEKGNPGFGIPGQPGPKGESGERGNVGLSGKPGPKGNDGSKG-DKGEIGLPGT 1441
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKGSDDY 101
G G++G ++G G+KG D G RG GS + G+RG KG + +
Sbjct: 1442 S-GSPGLRG-KDGVPGLKG-DTGSRGEPGSRGEPGDRGVKGPEGH 1483
Score = 118 (46.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/101 (37%), Positives = 54/101 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVM----KGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
GR EG+RG G + K ++ K +G+ + G +G+KG D G++G KG+
Sbjct: 1340 GRKGDEGQRGAPG-EPAKGILGPPGKKGARGDIGLVGPP-GPQGIKG-DRGDKGEKGNPG 1396
Query: 60 ---EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G+ G KG E GERG G G+ G KG+D G +G KG
Sbjct: 1397 FGIPGQPGPKG-ESGERGNVGLS-GKPGPKGND-GSKGDKG 1434
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 34/107 (31%), Positives = 59/107 (55%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMK-SSDEGERGMKG-SDEGERGMKG- 57
KG +G+ +GE+G +G++ G + G + + + +GE+G G +G +G G
Sbjct: 1220 KGPRGKPGQKGEKGEQGNN-GLPGLPGPVGVDGLPGLAGQKGEKGQDGIGTQGAQGPPGP 1278
Query: 58 -SDEGERGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGSD 99
++G G+ GS+ GE G++G G RG KG D+GE+G +G +
Sbjct: 1279 PGEKGNTGLSGSK-GEVGIQGLQGIAGPRGKKGLKGDQGEKGAQGEN 1324
Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
Identities = 28/62 (45%), Positives = 34/62 (54%)
Query: 40 EGERGMKGSDEGERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
+GE G KG + G +G KG D G G+ G G G G D G+RG G D GERG KG
Sbjct: 1568 KGEAGQKG-EPGSKGEKG-DHGRAGITGMPGLPGTPGKPGVD-GKRGVSGKD-GERGPKG 1623
Query: 98 SD 99
+
Sbjct: 1624 DE 1625
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 34/97 (35%), Positives = 51/97 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMK--SSDEGERGMKGSDEGERGMKGSDE----GERG 64
G++G+KG D+G+ +G + G + G G KG DEG+RG G G G
Sbjct: 1307 GKKGLKG-DQGEKGAQG-ENGPIGSPGIAGFPGAAGRKG-DEGQRGAPGEPAKGILGPPG 1363
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
KG+ G+ G+ G G +G KG D G++G KG+ +
Sbjct: 1364 KKGAR-GDIGLVGPP-GPQGIKG-DRGDKGEKGNPGF 1397
Score = 103 (41.3 bits), Expect = 0.00043, P = 0.00043
Identities = 34/100 (34%), Positives = 51/100 (51%)
Query: 10 EGERGMKGSDEGK---YVMKGSDKGE-YVMK-SSDEGERGMKGSDEGERGMKGSDEGERG 64
+G++G KG G + +G + + +K ++GERG+ G+D G G+ G G G
Sbjct: 1067 KGQKGEKGDGFGHGGLRLQQGPGHFDSFSLKVKGEKGERGLPGTD-GIPGLPGRP-GRTG 1124
Query: 65 MKGSEEGERGMKG--SDEGERGTKGSDEGERGTKGSDDYV 102
GS G+RG G D G G G +G+RG +G YV
Sbjct: 1125 PPGSP-GQRGPSGIPGDMGPPGNTGP-KGQRGERGEPGYV 1162
>TAIR|locus:2183384 [details] [associations]
symbol:GRP17 "AT5G07530" species:3702 "Arabidopsis
thaliana" [GO:0016020 "membrane" evidence=ISS] [GO:0019915 "lipid
storage" evidence=ISS] [GO:0009859 "pollen hydration" evidence=IMP]
[GO:0048544 "recognition of pollen" evidence=IMP] [GO:0070505
"pollen coat" evidence=IDA] [GO:0005576 "extracellular region"
evidence=IDA] [GO:0008289 "lipid binding" evidence=ISS] [GO:0019953
"sexual reproduction" evidence=RCA;IMP] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000136 Pfam:PF01277 PROSITE:PS00811
GO:GO:0016021 EMBL:CP002688 GO:GO:0005578 GO:GO:0008289
GO:GO:0048544 EMBL:AL163912 GO:GO:0070505 EMBL:Z11858 EMBL:Z11868
EMBL:AK229852 IPI:IPI00537159 IPI:IPI00891901 PIR:S19933 PIR:T49892
RefSeq:NP_001119185.1 RefSeq:NP_196370.1 UniGene:At.71 PRIDE:Q9LY09
EnsemblPlants:AT5G07530.1 GeneID:830646 KEGG:ath:AT5G07530
TAIR:At5g07530 eggNOG:NOG298741 OMA:KHKIGGG ProtClustDB:CLSN2687077
Genevestigator:Q9LY09 GO:GO:0012511 GO:GO:0009859 Uniprot:Q9LY09
Length = 543
Score = 128 (50.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 36/105 (34%), Positives = 53/105 (50%)
Query: 2 KGKGRS-VHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
K +G + G+ GM GS+ G +G S G+ +K+ E ++GM G E E GM GS
Sbjct: 214 KSEGEEGMSSGDEGMSGSEGGMSGGEGGKSKSGKGKLKAKLEKKKGMSGGSESEEGMSGS 273
Query: 59 DEGERGMKGSEEGERGMK-----GSDEG-ERGTKGSDEGERGTKG 97
+ G G GS+ + K G +G G GS+EG G++G
Sbjct: 274 EGGMSGGGGSKSKSKKSKLKAKLGKKKGMSGGMSGSEEGMSGSEG 318
Score = 125 (49.1 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 38/104 (36%), Positives = 48/104 (46%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
GKG EGE GM DEG +G G KS G+ +K E ++GM G E E
Sbjct: 210 GKGGK-SEGEEGMSSGDEGMSGSEGGMSGGEGGKSKS-GKGKLKAKLEKKKGMSGGSESE 267
Query: 63 RGMKGSEEGERGMKGSDEGERGTK-----GSDEG-ERGTKGSDD 100
GM GSE G G GS + +K G +G G GS++
Sbjct: 268 EGMSGSEGGMSGGGGSKSKSKKSKLKAKLGKKKGMSGGMSGSEE 311
Score = 121 (47.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 33/99 (33%), Positives = 45/99 (45%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSS-DEGERGMKGSDEGERGMKGSDE 60
K KG ++ +K GK G K ++ K EGE GM DEG G +G
Sbjct: 177 KSKGGLKAWCKKMLKSKFGGKKGKSGGGKSKFGGKGGKSEGEEGMSSGDEGMSGSEGGMS 236
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G G K S+ G+ +K E ++G G E E G GS+
Sbjct: 237 GGEGGK-SKSGKGKLKAKLEKKKGMSGGSESEEGMSGSE 274
Score = 109 (43.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 38/109 (34%), Positives = 53/109 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G S EG GM G + GK S KG+ +K+ E ++GM G E E GM GS+ G
Sbjct: 226 EGMSGSEG--GMSGGEGGK---SKSGKGK--LKAKLEKKKGMSGGSESEEGMSGSEGGMS 278
Query: 64 GMKGSEE-----------GER-----GMKGSDEGERGTKGSDEGERGTK 96
G GS+ G++ GM GS+EG G++G G+K
Sbjct: 279 GGGGSKSKSKKSKLKAKLGKKKGMSGGMSGSEEGMSGSEGGMSSGGGSK 327
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 36/99 (36%), Positives = 43/99 (43%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERG-MKGSDEGERGMKGSD 59
M G G + E G+ GS EG G G G+ G ++G +RGM GS
Sbjct: 439 MSGSGGGMSGSEGGVSGS-EGSMSGGGMSGGSGSKHKIGGGKHGGLRGKFGKKRGMSGS- 496
Query: 60 EGERGMKGSEEG--ERGMKGSDEGERGTKGSDEGERGTK 96
EG GM GSE G E GM GS G+ G G K
Sbjct: 497 EG--GMSGSEGGMSESGMSGSGGGKHKIGGGKHKFGGGK 533
Score = 99 (39.9 bits), Expect = 0.00029, P = 0.00029
Identities = 34/101 (33%), Positives = 47/101 (46%)
Query: 1 MKGKGRSVHE---GERGMKGSDEGKYV-MKGSDKGEYVMKSSDEGERGMKGSDEGERGMK 56
M G S H+ G+ G G GK M GS G M S+ G G +GS G GM
Sbjct: 411 MSGGSGSKHKIGGGKHGGLGGKFGKKRGMSGSGGG---MSGSEGGVSGSEGSMSGG-GMS 466
Query: 57 GSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G + + G + G G++G +RG GS+ G G++G
Sbjct: 467 GGSGSKHKIGGGKHG--GLRGKFGKKRGMSGSEGGMSGSEG 505
Score = 95 (38.5 bits), Expect = 0.00079, P = 0.00078
Identities = 31/95 (32%), Positives = 41/95 (43%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
GK R + GM GS+ G +GS G M + + G G G++G +
Sbjct: 434 GKKRGMSGSGGGMSGSEGGVSGSEGSMSGGG-MSGGSGSKHKIGGGKHG--GLRGKFGKK 490
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
RGM GSE G G +G E G GS G+ G
Sbjct: 491 RGMSGSEGGMSGSEGG-MSESGMSGSGGGKHKIGG 524
>UNIPROTKB|Q5LKH1 [details] [associations]
symbol:Q5LKH1 "Putative uncharacterized protein"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR008160 Pfam:PF01391 EMBL:CP000032
GenomeReviews:CP000032_GR RefSeq:YP_165237.1 GeneID:3196697
KEGG:sil:SPOA0410 PATRIC:23382176 OMA:NEGNEGD Uniprot:Q5LKH1
Length = 642
Score = 128 (50.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 3 GKGRSVHEGERGMKGSDEGKY--VMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGS 58
G+G+ EG+ G + ++ + +++ +D+G DEG+ +G DEG+ G +G
Sbjct: 283 GRGQEADEGDEGDEDDEDDTFGGLLEEADEGN----EGDEGDEDDEGDEDDEGDEGDEG- 337
Query: 59 DEGERGMKGSEEGERG--MKGSDEGERGTKGSD--EGERGTKGSDD 100
DE + G +G +EG+ G + DEG G +G++ E G +G +D
Sbjct: 338 DESQNGDEG-DEGDEGDELNDGDEGNEGDEGNEGNEANEGNEGDED 382
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEG--ERGMKGSD 59
+G ++HE + G +G DEG +G++ E +EG+ G +G DEG G++G D
Sbjct: 180 EGIDANMHEADEGDEG-DEGDENNEGNENNEG--DEGNEGDEGNEG-DEGLINIGLEG-D 234
Query: 60 EGERGMKGSE--EGERGMKG--SDEGERGTKGSDEGERGTKGSDD 100
EG G +G E EG G + +DEG+ + +DEG +G +D
Sbjct: 235 EGNEGNEGDENDEGNEGNENDENDEGDENNE-ADEGNEFDEGDED 278
Score = 121 (47.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +EG +G+ EG +G+++ E +EG G +GS EG G +G DEG
Sbjct: 390 EGNEGNEGNEANEGN-EGDEDNEGNEEDEG--NEDNEGNEGNEGS-EGNEGDEG-DEGNE 444
Query: 64 GMKGSEEGERGMKG-SDEGERGTKGSDEGERGTKGSDD 100
G +G+E E G +DEG+ G + +DEG +G ++
Sbjct: 445 GNEGNESNEGNEGGLNDEGDEGDE-NDEGNENDEGDEN 481
Score = 120 (47.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/101 (33%), Positives = 57/101 (56%)
Query: 10 EGERGMKGS--DEGKYVMKGS--DKGEYVMKSSDEGERGMKGSD--EGERGMKGSDEGER 63
EG G +G DEG +G D+G+ ++ DEG+ G +G + +G+ G +G DEG
Sbjct: 312 EGNEGDEGDEDDEGDEDDEGDEGDEGDE-SQNGDEGDEGDEGDELNDGDEGNEG-DEGNE 369
Query: 64 GMKGSE--EGERGMKGSD--EGERGTKGSDEGERGTKGSDD 100
G + +E EG+ +G++ EG G +G++ E G +G +D
Sbjct: 370 GNEANEGNEGDEDNEGNEGNEGNEGNEGNEANE-GNEGDED 409
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEG 61
+G EG+ G +G+ EG +G++ G + DEG+ +G+ DEG+ +G DEG
Sbjct: 432 EGNEGDEGDEGNEGN-EGNESNEGNEGG--LNDEGDEGDENDEGNENDEGDENNEG-DEG 487
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
+G+EE E G + DEG+ + DEG+ +G +D
Sbjct: 488 NEDNEGNEEDE-GNE-DDEGDEDNE-DDEGDEDDEGDED 523
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EG 61
+G +EG G + +EG +G++ E +EG G +G DEG+ G +G++ E
Sbjct: 396 EGNEANEGNEGDE-DNEGNEEDEGNEDNEG--NEGNEGSEGNEG-DEGDEGNEGNEGNES 451
Query: 62 ERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G +G ++EG+ G + +DEG +G DE G +G++D
Sbjct: 452 NEGNEGGLNDEGDEGDE-NDEGNENDEG-DENNEGDEGNED 490
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD 59
+G +++G+ G +G + EG +G++ E +EG G +G++ E G +G +
Sbjct: 351 EGDELNDGDEGNEGDEGNEGNEANEGNEGDED--NEGNEGNEGNEGNEGNEANEGNEGDE 408
Query: 60 --EGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGSD 99
EG +G+E EG G +GS EG G +G DEG G +G++
Sbjct: 409 DNEGNEEDEGNEDNEGNEGNEGS-EGNEGDEG-DEGNEGNEGNE 450
Score = 114 (45.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--DEG 61
+G +EG+ G +G DEG +G + + DEG G +G DE + G +G+ DE
Sbjct: 203 EGNENNEGDEGNEG-DEGN---EGDEGLINIGLEGDEGNEGNEG-DENDEGNEGNENDEN 257
Query: 62 ERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKGSDD 100
+ G + +E EG +G ++GE +G +DEG+ G + +D
Sbjct: 258 DEGDENNEADEGNEFDEGDEDGEFFGRGQEADEGDEGDEDDED 300
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/100 (29%), Positives = 55/100 (55%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERG--MKGSDEGERGMKGS--DEGER 63
EG +G ++G++ +G +D+G+ + ++ G ++ +DEG G +G DEG+
Sbjct: 268 EGNEFDEGDEDGEFFGRGQEADEGDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDE 327
Query: 64 GMKGSE--EGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
+G E EG+ G DEG+ G +G + +G+ G +G +
Sbjct: 328 DDEGDEGDEGDESQNG-DEGDEGDEGDELNDGDEGNEGDE 366
Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G +EG G + ++ EG +G++ E +EG+ +G++E E G + +EG
Sbjct: 369 EGNEANEGNEGDEDNEGNEGNEGNEGNEGNE--ANEGNEGDEDNEGNEEDE-GNE-DNEG 424
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G +GSE G G +G DEG G +G++ E G +D
Sbjct: 425 NEGNEGSE-GNEGDEG-DEGNEGNEGNESNEGNEGGLND 461
Score = 107 (42.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 7 SVHEGERGMKGSD--EGKYVMKGSDKGEYVMKS-SDEGERGMKGSDEGERGMKGS--DEG 61
S+ G+ G +G++ EG +G++ E + D+ G +G+ EG G+ G DEG
Sbjct: 25 SISSGDEGDEGNEDNEGNENDEGNEGNEISASTYDDDHNEGNEGN-EGNEGVDGQEDDEG 83
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G +G+E G G +G+ EG+ G + DEG+ + ++
Sbjct: 84 NEGDEGNE-GNEGNEGN-EGDEGNE-DDEGDENDENDEN 119
Score = 105 (42.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 10 EGERGMKG--SDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGE---RGMKGSDEGE 62
EG G +G +DEG + +D+G+ +DEG +G ++GE RG + +DEG+
Sbjct: 235 EGNEGNEGDENDEGNEGNENDENDEGDE-NNEADEGNEFDEGDEDGEFFGRGQE-ADEGD 292
Query: 63 RGMKGSEEGERG--MKGSDEGERGTKGS--DEGERGTKGSD 99
G + E+ G ++ +DEG G +G DEG+ +G +
Sbjct: 293 EGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDEDDEGDE 333
Score = 98 (39.6 bits), Expect = 0.00046, P = 0.00046
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGS--DEGERGMKGS- 58
+G +EG+ G + +EG +G+ D+G+ DEG+ +G DEG+ ++
Sbjct: 477 EGDENNEGDEGNE-DNEGNEEDEGNEDDEGDED-NEDDEGDEDDEGDEDDEGDESLEPDH 534
Query: 59 ----DEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKGSDD 100
DEG+ G + +EG+ DEG+ G +G DE + G +G +D
Sbjct: 535 PSRHDEGDEGDE-DDEGDEDADALLDDEGDEGDEG-DENDDGNEGDED 580
>TIGR_CMR|SPO_A0410 [details] [associations]
symbol:SPO_A0410 "hypothetical protein" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR008160
Pfam:PF01391 EMBL:CP000032 GenomeReviews:CP000032_GR
RefSeq:YP_165237.1 GeneID:3196697 KEGG:sil:SPOA0410 PATRIC:23382176
OMA:NEGNEGD Uniprot:Q5LKH1
Length = 642
Score = 128 (50.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 32/106 (30%), Positives = 58/106 (54%)
Query: 3 GKGRSVHEGERGMKGSDEGKY--VMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGS 58
G+G+ EG+ G + ++ + +++ +D+G DEG+ +G DEG+ G +G
Sbjct: 283 GRGQEADEGDEGDEDDEDDTFGGLLEEADEGN----EGDEGDEDDEGDEDDEGDEGDEG- 337
Query: 59 DEGERGMKGSEEGERG--MKGSDEGERGTKGSD--EGERGTKGSDD 100
DE + G +G +EG+ G + DEG G +G++ E G +G +D
Sbjct: 338 DESQNGDEG-DEGDEGDELNDGDEGNEGDEGNEGNEANEGNEGDED 382
Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 36/105 (34%), Positives = 57/105 (54%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEG--ERGMKGSD 59
+G ++HE + G +G DEG +G++ E +EG+ G +G DEG G++G D
Sbjct: 180 EGIDANMHEADEGDEG-DEGDENNEGNENNEG--DEGNEGDEGNEG-DEGLINIGLEG-D 234
Query: 60 EGERGMKGSE--EGERGMKG--SDEGERGTKGSDEGERGTKGSDD 100
EG G +G E EG G + +DEG+ + +DEG +G +D
Sbjct: 235 EGNEGNEGDENDEGNEGNENDENDEGDENNE-ADEGNEFDEGDED 278
Score = 121 (47.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 33/98 (33%), Positives = 53/98 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +EG +G+ EG +G+++ E +EG G +GS EG G +G DEG
Sbjct: 390 EGNEGNEGNEANEGN-EGDEDNEGNEEDEG--NEDNEGNEGNEGS-EGNEGDEG-DEGNE 444
Query: 64 GMKGSEEGERGMKG-SDEGERGTKGSDEGERGTKGSDD 100
G +G+E E G +DEG+ G + +DEG +G ++
Sbjct: 445 GNEGNESNEGNEGGLNDEGDEGDE-NDEGNENDEGDEN 481
Score = 120 (47.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 34/101 (33%), Positives = 57/101 (56%)
Query: 10 EGERGMKGS--DEGKYVMKGS--DKGEYVMKSSDEGERGMKGSD--EGERGMKGSDEGER 63
EG G +G DEG +G D+G+ ++ DEG+ G +G + +G+ G +G DEG
Sbjct: 312 EGNEGDEGDEDDEGDEDDEGDEGDEGDE-SQNGDEGDEGDEGDELNDGDEGNEG-DEGNE 369
Query: 64 GMKGSE--EGERGMKGSD--EGERGTKGSDEGERGTKGSDD 100
G + +E EG+ +G++ EG G +G++ E G +G +D
Sbjct: 370 GNEANEGNEGDEDNEGNEGNEGNEGNEGNEANE-GNEGDED 409
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/99 (33%), Positives = 54/99 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEG 61
+G EG+ G +G+ EG +G++ G + DEG+ +G+ DEG+ +G DEG
Sbjct: 432 EGNEGDEGDEGNEGN-EGNESNEGNEGG--LNDEGDEGDENDEGNENDEGDENNEG-DEG 487
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
+G+EE E G + DEG+ + DEG+ +G +D
Sbjct: 488 NEDNEGNEEDE-GNE-DDEGDEDNE-DDEGDEDDEGDED 523
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 32/101 (31%), Positives = 55/101 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EG 61
+G +EG G + +EG +G++ E +EG G +G DEG+ G +G++ E
Sbjct: 396 EGNEANEGNEGDE-DNEGNEEDEGNEDNEG--NEGNEGSEGNEG-DEGDEGNEGNEGNES 451
Query: 62 ERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G +G ++EG+ G + +DEG +G DE G +G++D
Sbjct: 452 NEGNEGGLNDEGDEGDE-NDEGNENDEG-DENNEGDEGNED 490
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD 59
+G +++G+ G +G + EG +G++ E +EG G +G++ E G +G +
Sbjct: 351 EGDELNDGDEGNEGDEGNEGNEANEGNEGDED--NEGNEGNEGNEGNEGNEANEGNEGDE 408
Query: 60 --EGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGSD 99
EG +G+E EG G +GS EG G +G DEG G +G++
Sbjct: 409 DNEGNEEDEGNEDNEGNEGNEGS-EGNEGDEG-DEGNEGNEGNE 450
Score = 114 (45.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 33/103 (32%), Positives = 55/103 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--DEG 61
+G +EG+ G +G DEG +G + + DEG G +G DE + G +G+ DE
Sbjct: 203 EGNENNEGDEGNEG-DEGN---EGDEGLINIGLEGDEGNEGNEG-DENDEGNEGNENDEN 257
Query: 62 ERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKGSDD 100
+ G + +E EG +G ++GE +G +DEG+ G + +D
Sbjct: 258 DEGDENNEADEGNEFDEGDEDGEFFGRGQEADEGDEGDEDDED 300
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/100 (29%), Positives = 55/100 (55%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERG--MKGSDEGERGMKGS--DEGER 63
EG +G ++G++ +G +D+G+ + ++ G ++ +DEG G +G DEG+
Sbjct: 268 EGNEFDEGDEDGEFFGRGQEADEGDEGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDE 327
Query: 64 GMKGSE--EGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
+G E EG+ G DEG+ G +G + +G+ G +G +
Sbjct: 328 DDEGDEGDEGDESQNG-DEGDEGDEGDELNDGDEGNEGDE 366
Score = 110 (43.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 31/99 (31%), Positives = 52/99 (52%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G +EG G + ++ EG +G++ E +EG+ +G++E E G + +EG
Sbjct: 369 EGNEANEGNEGDEDNEGNEGNEGNEGNEGNE--ANEGNEGDEDNEGNEEDE-GNE-DNEG 424
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G +GSE G G +G DEG G +G++ E G +D
Sbjct: 425 NEGNEGSE-GNEGDEG-DEGNEGNEGNESNEGNEGGLND 461
Score = 107 (42.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 30/99 (30%), Positives = 53/99 (53%)
Query: 7 SVHEGERGMKGSD--EGKYVMKGSDKGEYVMKS-SDEGERGMKGSDEGERGMKGS--DEG 61
S+ G+ G +G++ EG +G++ E + D+ G +G+ EG G+ G DEG
Sbjct: 25 SISSGDEGDEGNEDNEGNENDEGNEGNEISASTYDDDHNEGNEGN-EGNEGVDGQEDDEG 83
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G +G+E G G +G+ EG+ G + DEG+ + ++
Sbjct: 84 NEGDEGNE-GNEGNEGN-EGDEGNE-DDEGDENDENDEN 119
Score = 105 (42.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 10 EGERGMKG--SDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGE---RGMKGSDEGE 62
EG G +G +DEG + +D+G+ +DEG +G ++GE RG + +DEG+
Sbjct: 235 EGNEGNEGDENDEGNEGNENDENDEGDE-NNEADEGNEFDEGDEDGEFFGRGQE-ADEGD 292
Query: 63 RGMKGSEEGERG--MKGSDEGERGTKGS--DEGERGTKGSD 99
G + E+ G ++ +DEG G +G DEG+ +G +
Sbjct: 293 EGDEDDEDDTFGGLLEEADEGNEGDEGDEDDEGDEDDEGDE 333
Score = 98 (39.6 bits), Expect = 0.00046, P = 0.00046
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGS--DEGERGMKGS- 58
+G +EG+ G + +EG +G+ D+G+ DEG+ +G DEG+ ++
Sbjct: 477 EGDENNEGDEGNE-DNEGNEEDEGNEDDEGDED-NEDDEGDEDDEGDEDDEGDESLEPDH 534
Query: 59 ----DEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKGSDD 100
DEG+ G + +EG+ DEG+ G +G DE + G +G +D
Sbjct: 535 PSRHDEGDEGDE-DDEGDEDADALLDDEGDEGDEG-DENDDGNEGDED 580
>UNIPROTKB|D4A111 [details] [associations]
symbol:Col6a3 "Procollagen, type VI, alpha 3 (Predicted),
isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0005581
"collagen" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 RGD:1308704 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00530000063022
EMBL:CH473997 IPI:IPI00765205 Ensembl:ENSRNOT00000026719
NextBio:691091 Uniprot:D4A111
Length = 2207
Score = 134 (52.2 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 38/89 (42%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D EG++G+ GS GE+G G G++G KG
Sbjct: 2086 GQRGVKGS-RGFPGEKG-ELGEIGLDGLDGEEGDKGLPGSS-GEKGSPGR-RGDKGPKG- 2140
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
++GERG G G+ G G D +RG KG
Sbjct: 2141 DKGERGDVGI-RGDPGDSGRDSQQRGPKG 2168
Score = 114 (45.2 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 10 EGERGMKGS--DEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGM 65
+G RG G + G+ + G D +G+ + S GE+G G G++G KG D+GERG
Sbjct: 2091 KGSRGFPGEKGELGEIGLDGLDGEEGDKGLPGSS-GEKGSPGR-RGDKGPKG-DKGERGD 2147
Query: 66 KGSEEGERGMKGSDEGERGTKGS--DEGERGTKGSD 99
G G+ G G D +RG KG D G G G D
Sbjct: 2148 VGIR-GDPGDSGRDSQQRGPKGETGDIGPMGLPGRD 2182
Score = 112 (44.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 41/100 (41%), Positives = 52/100 (52%)
Query: 11 GERGMKGSDEGKYVMKG-SDKGEYVMKSSDEG---ERGMKGSDEGERGMKGSDEGERGMK 66
GERG +G G KG S + Y DEG ERG G + G +G +G G+RG+K
Sbjct: 2035 GERGDRGPI-GSIGPKGISGEDGYRGYPGDEGGPGERGPPGVN-GTQGFQGCP-GQRGVK 2091
Query: 67 GS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
GS E+GE G G D +GE G KG GE+G+ G
Sbjct: 2092 GSRGFPGEKGELGEIGLDGLDGEEGDKGLPGSSGEKGSPG 2131
Score = 102 (41.0 bits), Expect = 0.00071, P = 0.00071
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 37 SSDEGERGMKGSDEGERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERG 94
S + G+RG GS G +G+ G D G RG G E GERG G + G +G +G G+RG
Sbjct: 2034 SGERGDRGPIGSI-GPKGISGED-GYRGYPGDEGGPGERGPPGVN-GTQGFQGCP-GQRG 2089
Query: 95 TKGS 98
KGS
Sbjct: 2090 VKGS 2093
>UNIPROTKB|E1BZN7 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 GeneTree:ENSGT00640000091447
EMBL:AADN02016911 IPI:IPI00821826 Ensembl:ENSGALT00000037895
Uniprot:E1BZN7
Length = 483
Score = 126 (49.4 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G++G KG D G G G K ++G+RG+ G+ EG++G+KG D+G G +G
Sbjct: 282 GQKGEKG-DLGPRGFPGVT-GSLGPKG-EKGDRGVPGT-EGQKGIKG-DQGLPGSQGPT- 335
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G++G KG D G +G KG + G +G KG Y
Sbjct: 336 GQKGSKG-DYGSKGLKG-EPGLKGAKGDKGY 364
Score = 117 (46.2 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G +G+RG+ G+ EG+ +KG D+G + S +G G KGS +G+ G KG +GE G
Sbjct: 303 GPKGEKGDRGVPGT-EGQKGIKG-DQG---LPGS-QGPTGQKGS-KGDYGSKGL-KGEPG 354
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERG 94
+KG++ G++G G GTKGS +GE+G
Sbjct: 355 LKGAK-GDKGYPVGT-GPPGTKGS-KGEQG 381
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 40/104 (38%), Positives = 55/104 (52%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGSDKGEY---------VMKSSDEGERGMKGSDEGER 53
GR H+GERG G +G +KG D+G V+ + +G +G KG D G
Sbjct: 135 GRPGHKGERGPPGISGLQGPPGIKG-DQGIQEPLHWPWCGVVPAGLQGLQGSKG-DRGPA 192
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G +G ++GE+GMKG + G+ G +GE G KG D G RG G
Sbjct: 193 GPRG-EQGEQGMKG----QAGIPGK-KGEMGQKG-DPGIRGPMG 229
>UNIPROTKB|E2RLK6 [details] [associations]
symbol:C1QTNF9 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008983 GeneTree:ENSGT00700000104099 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 CTD:338872 OMA:GMRGWKG
EMBL:AAEX03014261 RefSeq:XP_851299.1 Ensembl:ENSCAFT00000011399
GeneID:609026 KEGG:cfa:609026 NextBio:20894645 Uniprot:E2RLK6
Length = 333
Score = 123 (48.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 38/95 (40%), Positives = 52/95 (54%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G+ GE+G +G+D GK KG KG D+G RG G G +G+ G GE
Sbjct: 63 GPGKDGMNGEKGERGAD-GKVEAKGI-KG-------DQGSRGPPGK-HGPKGLVGP-MGE 111
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G++G E G +G KG D+G G G EG +G+ G
Sbjct: 112 KGLRG-ETGPQGQKG-DKGGVGPSGP-EGLKGSTG 143
Score = 94 (38.1 bits), Expect = 0.00050, P = 0.00050
Identities = 33/98 (33%), Positives = 50/98 (51%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMK--SSDEGERGMKGS--DEGERGMKGSD--EG 61
+G++G +G GK+ KG GE ++ + +G++G KG G G+KGS G
Sbjct: 88 KGDQGSRGPP-GKHGPKGLVGPMGEKGLRGETGPQGQKGDKGGVGPSGPEGLKGSTGPSG 146
Query: 62 ERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G+ G G+ G KG D G G +G + G RG +G
Sbjct: 147 PMGLPGPMGPIGKPGPKG-DAGPLGPQG-EPGVRGMRG 182
>UNIPROTKB|F1NF73 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
SMART:SM00202 GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005044 SUPFAM:SSF56487 OMA:WVRVSHE
GeneTree:ENSGT00640000091447 EMBL:AADN02016911 IPI:IPI00821000
Ensembl:ENSGALT00000019793 Uniprot:F1NF73
Length = 517
Score = 126 (49.4 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 36/91 (39%), Positives = 53/91 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G++G KG D G G G K ++G+RG+ G+ EG++G+KG D+G G +G
Sbjct: 316 GQKGEKG-DLGPRGFPGVT-GSLGPKG-EKGDRGVPGT-EGQKGIKG-DQGLPGSQGPT- 369
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G++G KG D G +G KG + G +G KG Y
Sbjct: 370 GQKGSKG-DYGSKGLKG-EPGLKGAKGDKGY 398
Score = 122 (48.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 40/102 (39%), Positives = 53/102 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEGE 62
GR H+GERG G K S+ S +G G+KG D+G +G++G +G+
Sbjct: 167 GRPGHKGERGPPGISLPK---SPSELINVSHISGLQGPPGIKG-DQGIQGLQGLQGSKGD 222
Query: 63 RGMKG--SEEGERGMKGS-----DEGERGTKGSDEGERGTKG 97
RG G E+GE+GMKG +GE G KG D G RG G
Sbjct: 223 RGPAGPRGEQGEQGMKGQAGIPGKKGEMGQKG-DPGIRGPMG 263
Score = 117 (46.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/90 (41%), Positives = 56/90 (62%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G +G+RG+ G+ EG+ +KG D+G + S +G G KGS +G+ G KG +GE G
Sbjct: 337 GPKGEKGDRGVPGT-EGQKGIKG-DQG---LPGS-QGPTGQKGS-KGDYGSKGL-KGEPG 388
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERG 94
+KG++ G++G G GTKGS +GE+G
Sbjct: 389 LKGAK-GDKGYPVGT-GPPGTKGS-KGEQG 415
>ZFIN|ZDB-GENE-091118-111 [details] [associations]
symbol:si:ch211-196i2.2 "si:ch211-196i2.2"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-091118-111 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201
GeneTree:ENSGT00700000104301 EMBL:CR392357 IPI:IPI00484450
Ensembl:ENSDART00000051456 Uniprot:E7F5A1
Length = 898
Score = 129 (50.5 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 36/101 (35%), Positives = 56/101 (55%)
Query: 3 GKGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGS 58
G G+ +G GMKG D+GK G K ++ + G+ G++ + GE+G KG
Sbjct: 484 GVGKPGPDGREGMKGEKGDQGKNGAPG--KLGHIGRRGKRGKAGLRATRGPRGEKGEKG- 540
Query: 59 DEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
D GE+G+ G G G++G + G+ G KG+ EGE+G +G
Sbjct: 541 DVGEKGLPGWG-GSMGIQGPRGEPGDEGVKGA-EGEKGDQG 579
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG S EGE+G G D+G+ ++G D + V G G++GS +GE GM+G
Sbjct: 425 KGLSGPEGEKGEPG-DKGEPGLEGPDGLQGVQ--GPPGLPGLEGS-QGEAGMRGPP---- 476
Query: 64 GMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
G+ G++ G G G D EG +G KG D+G+ G G
Sbjct: 477 GLPGAQGGV-GKPGPDGREGMKGEKG-DQGKNGAPG 510
Score = 102 (41.0 bits), Expect = 0.00026, P = 0.00026
Identities = 38/105 (36%), Positives = 50/105 (47%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSD-----EGERGMKGSDEGERGMK 56
KG EG G++G G ++GS +GE M+ +G G G D G GMK
Sbjct: 440 KGEPGLEGPDGLQGVQGPPGLPGLEGS-QGEAGMRGPPGLPGAQGGVGKPGPD-GREGMK 497
Query: 57 GS--DEGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKG 97
G D+G+ G G G RG +G G R T+G GE+G KG
Sbjct: 498 GEKGDQGKNGAPGKLGHIGRRGKRGK-AGLRATRGP-RGEKGEKG 540
Score = 97 (39.2 bits), Expect = 0.00089, P = 0.00089
Identities = 39/104 (37%), Positives = 50/104 (48%)
Query: 1 MKG-KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG 57
+KG +G H G G G +GK GS GE EG G KG G+ G KG
Sbjct: 352 LKGAEGVPGHPGLVGPDGPAGSKGKTGPSGSP-GE-PGNPGPEGIAGPKGV-RGDTG-KG 407
Query: 58 SDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+G G+ G G +G+ G EGE+G G D+GE G +G D
Sbjct: 408 GTQGGVGLVGPIGPLGPKGLSGP-EGEKGEPG-DKGEPGLEGPD 449
>RGD|1308704 [details] [associations]
symbol:Col6a3 "collagen, type VI, alpha 3" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004867 "serine-type endopeptidase inhibitor activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0009749
"response to glucose stimulus" evidence=IEP] [GO:0031012
"extracellular matrix" evidence=ISO] [GO:0042383 "sarcolemma"
evidence=ISO] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060
SMART:SM00131 SMART:SM00327 RGD:1308704 GO:GO:0005615
Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867 GO:GO:0009749
SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022
OrthoDB:EOG4HT8R9 IPI:IPI00565677 PRIDE:D4A115
Ensembl:ENSRNOT00000026707 UCSC:RGD:1308704 ArrayExpress:D4A115
Uniprot:D4A115
Length = 2665
Score = 134 (52.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 38/89 (42%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D EG++G+ GS GE+G G G++G KG
Sbjct: 1478 GQRGVKGS-RGFPGEKG-ELGEIGLDGLDGEEGDKGLPGSS-GEKGSPGR-RGDKGPKG- 1532
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
++GERG G G+ G G D +RG KG
Sbjct: 1533 DKGERGDVGI-RGDPGDSGRDSQQRGPKG 1560
Score = 116 (45.9 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 39/104 (37%), Positives = 52/104 (50%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG GR +G +G KG + G ++G D G+ S G +G G D G G+ G D
Sbjct: 1519 KGSPGRRGDKGPKGDKG-ERGDVGIRG-DPGDSGRDSQQRGPKGETG-DIGPMGLPGRDG 1575
Query: 60 -EGERGMKGSEEG--ERGMKGSDEGERGTKGSD--EGERGTKGS 98
G G G + G RG G+ +G RG G EGE+GT+GS
Sbjct: 1576 IPGSPGDPGKDGGFGRRGPAGA-KGNRGGPGQPGFEGEQGTRGS 1618
Score = 114 (45.2 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 36/96 (37%), Positives = 49/96 (51%)
Query: 10 EGERGMKGS--DEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGM 65
+G RG G + G+ + G D +G+ + S GE+G G G++G KG D+GERG
Sbjct: 1483 KGSRGFPGEKGELGEIGLDGLDGEEGDKGLPGSS-GEKGSPGR-RGDKGPKG-DKGERGD 1539
Query: 66 KGSEEGERGMKGSDEGERGTKGS--DEGERGTKGSD 99
G G+ G G D +RG KG D G G G D
Sbjct: 1540 VGIR-GDPGDSGRDSQQRGPKGETGDIGPMGLPGRD 1574
Score = 112 (44.5 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 41/100 (41%), Positives = 52/100 (52%)
Query: 11 GERGMKGSDEGKYVMKG-SDKGEYVMKSSDEG---ERGMKGSDEGERGMKGSDEGERGMK 66
GERG +G G KG S + Y DEG ERG G + G +G +G G+RG+K
Sbjct: 1427 GERGDRGPI-GSIGPKGISGEDGYRGYPGDEGGPGERGPPGVN-GTQGFQGCP-GQRGVK 1483
Query: 67 GS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
GS E+GE G G D +GE G KG GE+G+ G
Sbjct: 1484 GSRGFPGEKGELGEIGLDGLDGEEGDKGLPGSSGEKGSPG 1523
Score = 102 (41.0 bits), Expect = 0.00087, P = 0.00087
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 37 SSDEGERGMKGSDEGERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERG 94
S + G+RG GS G +G+ G D G RG G E GERG G + G +G +G G+RG
Sbjct: 1426 SGERGDRGPIGSI-GPKGISGED-GYRGYPGDEGGPGERGPPGVN-GTQGFQGCP-GQRG 1481
Query: 95 TKGS 98
KGS
Sbjct: 1482 VKGS 1485
>UNIPROTKB|E7ENL6 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060
SMART:SM00131 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
EMBL:AC112715 EMBL:AC112721 HGNC:HGNC:2213 ChiTaRS:COL6A3
IPI:IPI00072918 ProteinModelPortal:E7ENL6 SMR:E7ENL6 PRIDE:E7ENL6
Ensembl:ENST00000347401 ArrayExpress:E7ENL6 Bgee:E7ENL6
Uniprot:E7ENL6
Length = 2976
Score = 134 (52.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 38/89 (42%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D +G++G+ GS GE+G G G++G +G
Sbjct: 1888 GQRGVKGS-RGFPGEKG-EVGEIGLDGLDGEDGDKGLPGSS-GEKGNPGR-RGDKGPRG- 1942
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+GERG G G+ G G D ERG KG
Sbjct: 1943 EKGERGDVGI-RGDPGNPGQDSQERGPKG 1970
Score = 115 (45.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/105 (37%), Positives = 52/105 (49%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG GR +G RG KG + G ++G D G S + G +G G D G G+ G D
Sbjct: 1929 KGNPGRRGDKGPRGEKG-ERGDVGIRG-DPGNPGQDSQERGPKGETG-DLGPMGVPGRDG 1985
Query: 60 ----EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
GE G G G RG G+ +G +G G EGE+GT+G+
Sbjct: 1986 VPGGPGETGKNGGF-GRRGPPGA-KGNKGGPGQPGFEGEQGTRGA 2028
Score = 107 (42.7 bits), Expect = 0.00029, P = 0.00029
Identities = 40/102 (39%), Positives = 51/102 (50%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
S G+RG GS K + G D +G Y GERG G + G +G +G G+RG
Sbjct: 1836 SGQRGDRGPIGSIGPKGI-PGEDGYRG-YPGDEGGPGERGPPGVN-GTQGFQGCP-GQRG 1891
Query: 65 MKGS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
+KGS E+GE G G D +GE G KG GE+G G
Sbjct: 1892 VKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPG 1933
Score = 105 (42.0 bits), Expect = 0.00047, P = 0.00047
Identities = 36/102 (35%), Positives = 47/102 (46%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G GE G+ G D +G + GS +KG + D+G RG KG + G+ G++G D
Sbjct: 1900 GEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGN-PGRRGDKGPRGEKG-ERGDVGIRG-DP 1956
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
G G E G +G G D G G G D GE G G
Sbjct: 1957 GNPGQDSQERGPKGETG-DLGPMGVPGRDGVPGGPGETGKNG 1997
Score = 102 (41.0 bits), Expect = 0.00098, P = 0.00097
Identities = 40/104 (38%), Positives = 50/104 (48%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDK--GEYVMKSSDEGERGMKGSDEGERGMKG--- 57
G G+ EGE+G +G+ +G G GE + S G G G+ GERG G
Sbjct: 2013 GPGQPGFEGEQGTRGA-QGPAGPAGPPGLIGEQGI-SGPRGSGGAAGAP-GERGRTGPLG 2069
Query: 58 --SDEGERGMKGSEEGERGMKGS--DEGERGTKGSDEGERGTKG 97
+ GE G KG G RG +G D+G G GS EG RG KG
Sbjct: 2070 RKGEPGEPGPKGGI-GNRGPRGETGDDGRDGV-GS-EGRRGKKG 2110
>UNIPROTKB|E9PCV6 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060
SMART:SM00131 SMART:SM00327 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
EMBL:AC112715 EMBL:AC112721 IPI:IPI00072917 HGNC:HGNC:2213
ChiTaRS:COL6A3 ProteinModelPortal:E9PCV6 SMR:E9PCV6 PRIDE:E9PCV6
Ensembl:ENST00000346358 ArrayExpress:E9PCV6 Bgee:E9PCV6
Uniprot:E9PCV6
Length = 2977
Score = 134 (52.2 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 38/89 (42%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D +G++G+ GS GE+G G G++G +G
Sbjct: 1889 GQRGVKGS-RGFPGEKG-EVGEIGLDGLDGEDGDKGLPGSS-GEKGNPGR-RGDKGPRG- 1943
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+GERG G G+ G G D ERG KG
Sbjct: 1944 EKGERGDVGI-RGDPGNPGQDSQERGPKG 1971
Score = 115 (45.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/105 (37%), Positives = 52/105 (49%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG GR +G RG KG + G ++G D G S + G +G G D G G+ G D
Sbjct: 1930 KGNPGRRGDKGPRGEKG-ERGDVGIRG-DPGNPGQDSQERGPKGETG-DLGPMGVPGRDG 1986
Query: 60 ----EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
GE G G G RG G+ +G +G G EGE+GT+G+
Sbjct: 1987 VPGGPGETGKNGGF-GRRGPPGA-KGNKGGPGQPGFEGEQGTRGA 2029
Score = 107 (42.7 bits), Expect = 0.00029, P = 0.00029
Identities = 40/102 (39%), Positives = 51/102 (50%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
S G+RG GS K + G D +G Y GERG G + G +G +G G+RG
Sbjct: 1837 SGQRGDRGPIGSIGPKGI-PGEDGYRG-YPGDEGGPGERGPPGVN-GTQGFQGCP-GQRG 1892
Query: 65 MKGS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
+KGS E+GE G G D +GE G KG GE+G G
Sbjct: 1893 VKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPG 1934
Score = 105 (42.0 bits), Expect = 0.00047, P = 0.00047
Identities = 36/102 (35%), Positives = 47/102 (46%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G GE G+ G D +G + GS +KG + D+G RG KG + G+ G++G D
Sbjct: 1901 GEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGN-PGRRGDKGPRGEKG-ERGDVGIRG-DP 1957
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
G G E G +G G D G G G D GE G G
Sbjct: 1958 GNPGQDSQERGPKGETG-DLGPMGVPGRDGVPGGPGETGKNG 1998
Score = 102 (41.0 bits), Expect = 0.00098, P = 0.00097
Identities = 40/104 (38%), Positives = 50/104 (48%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDK--GEYVMKSSDEGERGMKGSDEGERGMKG--- 57
G G+ EGE+G +G+ +G G GE + S G G G+ GERG G
Sbjct: 2014 GPGQPGFEGEQGTRGA-QGPAGPAGPPGLIGEQGI-SGPRGSGGAAGAP-GERGRTGPLG 2070
Query: 58 --SDEGERGMKGSEEGERGMKGS--DEGERGTKGSDEGERGTKG 97
+ GE G KG G RG +G D+G G GS EG RG KG
Sbjct: 2071 RKGEPGEPGPKGGI-GNRGPRGETGDDGRDGV-GS-EGRRGKKG 2111
>ZFIN|ZDB-GENE-070501-6 [details] [associations]
symbol:col6a1 "collagen, type VI, alpha 1"
species:7955 "Danio rerio" [GO:0007519 "skeletal muscle tissue
development" evidence=IMP] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 ZFIN:ZDB-GENE-070501-6
InterPro:IPR008160 Pfam:PF01391 GO:GO:0007519
GeneTree:ENSGT00530000063022 EMBL:CR925698 IPI:IPI00510185
Ensembl:ENSDART00000110608 Uniprot:F1Q6P3
Length = 1010
Score = 129 (50.5 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 40/101 (39%), Positives = 55/101 (54%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD- 59
G +G+ G +G+ D G +G KG+ +K D+GERG KG D+G G+ G+D
Sbjct: 270 GMPGEKGDFGAQGNPGDPGPVGYQGM-KGDQGIKG-DKGERGHKGFKGDKGHHGLDGTDG 327
Query: 60 -EGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
+GE G G G +G G D +GE G KG D G+ G KG
Sbjct: 328 RKGEPGFPGLP-GCKGSPGPDGLQGESGPKG-DPGQYGRKG 366
Score = 128 (50.1 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 45/116 (38%), Positives = 61/116 (52%)
Query: 1 MKG-KGRSVHEGERGMKG--SDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGER 53
MKG +G +GERG KG D+G + + G+D KGE G +G G D +GE
Sbjct: 295 MKGDQGIKGDKGERGHKGFKGDKGHHGLDGTDGRKGEPGFPGLP-GCKGSPGPDGLQGES 353
Query: 54 GMKGSDEGERGMKGSE-----EGERGMKGS-----DEGERGTKGS--DEGERGTKG 97
G KG D G+ G KG +GE G G+ +G+RG +G+ D+GERG G
Sbjct: 354 GPKG-DPGQYGRKGERGDPGRDGEPGRPGNYGPSGAKGDRGPRGANGDKGERGDDG 408
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 39/101 (38%), Positives = 52/101 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKGSDEGERGMKGSDEGE 62
GR + G G KG D G G DKGE +G RG +G GE+G +GS G
Sbjct: 378 GRPGNYGPSGAKG-DRGPRGANG-DKGERGDDGPPGPDGPRGERGQG-GEKGEQGS-RGN 433
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKGSDDY 101
RG +G E GE G +G ++G G+ G+ + GE+G G Y
Sbjct: 434 RGPRG-EPGEPGPRG-EQGREGSSGANGEPGEQGRAGQPGY 472
Score = 124 (48.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 43/105 (40%), Positives = 55/105 (52%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--- 57
KG G+ +GERG G D G+ G+ G K D G RG G D+GERG G
Sbjct: 356 KGDPGQYGRKGERGDPGRD-GEPGRPGN-YGPSGAKG-DRGPRGANG-DKGERGDDGPPG 411
Query: 58 --SDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
GERG +G E+GE+G +G+ G RG G GE+G +GS
Sbjct: 412 PDGPRGERG-QGGEKGEQGSRGN-RGPRGEPGEPGPRGEQGREGS 454
Score = 117 (46.2 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 38/103 (36%), Positives = 54/103 (52%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSD--EGERGMKG 57
+G + +GERG G +G +G +KGE + + G RG G GE+G +G
Sbjct: 395 RGANGDKGERGDDGPPGPDGPRGERGQGGEKGEQGSRGN-RGPRGEPGEPGPRGEQGREG 453
Query: 58 SD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
S GE G +G G+ G +G DEG G +G D+G RG KG+
Sbjct: 454 SSGANGEPGEQG-RAGQPGYRG-DEGPAGPEG-DKGPRGIKGA 493
Score = 114 (45.2 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/99 (38%), Positives = 52/99 (52%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD-EGER 63
G G+ G +G DEG +G DKG +K + G+RG+ G + GE G G+ EG
Sbjct: 462 GEQGRAGQPGYRG-DEGPAGPEG-DKGPRGIKGAP-GDRGLMG-ERGEDGPPGNGTEGCA 517
Query: 64 GMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGSDD 100
G +G G RG G+ G +GT G D+GE G G D+
Sbjct: 518 GFQGYP-GPRGDPGAPGG-KGTPGPKGDDGEPGDTGLDN 554
>UNIPROTKB|Q28092 [details] [associations]
symbol:CYLC2 "Cylicin-2" species:9913 "Bos taurus"
[GO:0033150 "cytoskeletal calyx" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0007275 GO:GO:0030154
GO:GO:0005200 GO:GO:0007283 GO:GO:0033150 PANTHER:PTHR16742
EMBL:Z46789 IPI:IPI00701189 PIR:I46014 RefSeq:NP_776728.1
UniGene:Bt.50017 STRING:Q28092 PRIDE:Q28092 GeneID:281738
KEGG:bta:281738 CTD:1539 eggNOG:NOG73087 NextBio:20805658
Uniprot:Q28092
Length = 488
Score = 125 (49.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/108 (37%), Positives = 58/108 (53%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EGE+G D+ ++G KGS +
Sbjct: 253 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGSKK 309
Query: 61 GERGMKGSEEGERG--MKGSDEGERGTK-GSD-----EGERGTKGSDD 100
G+ SE GE+G K +G++G+K G + EGE+G DD
Sbjct: 310 GKESATESE-GEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKDD 356
Score = 125 (49.1 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/108 (37%), Positives = 58/108 (53%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EGE+G D+ ++G KGS +
Sbjct: 225 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGSKK 281
Query: 61 GERGMKGSEEGERG--MKGSDEGERGTK-GSD-----EGERGTKGSDD 100
G+ SE GE+G K +G++G+K G + EGE+G DD
Sbjct: 282 GKESATESE-GEKGDAKKDDKKGKKGSKKGKESATESEGEKGDAKKDD 328
Score = 123 (48.4 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 42/108 (38%), Positives = 59/108 (54%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EGE+G D+ ++G KGS +
Sbjct: 281 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGSKK 337
Query: 61 GERGMKGSEEGERG--MKGSDEGERGTK-G--SD---EGERGTKGSDD 100
G+ SE GE+G K +G++G+K G SD EG++G DD
Sbjct: 338 GKESATESE-GEKGDAKKDDKKGKKGSKKGKESDSKAEGDKGDAKKDD 384
Score = 115 (45.5 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 12 ERGMKGSDEGKYVMK--GSDKGEYVMKSSDEGERGMKGSD-----EGERGMKGSDEGERG 64
++ KGS +GK GS+KG+ K S + ++ KG + EGE+G D+ ++G
Sbjct: 190 KKDRKGSKKGKETPSDSGSEKGD-AKKDSKKSKKDSKGKESATESEGEKGDAKKDD-KKG 247
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
KGS++G+ S EGE+G D+ ++G KGS
Sbjct: 248 KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGS 279
Score = 103 (41.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 32/97 (32%), Positives = 51/97 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG + + ++ K S +GK S+ GE D+ ++G KGS +G+ S EGE+
Sbjct: 210 KGDAKKDSKKSKKDS-KGKESATESE-GEKGDAKKDD-KKGKKGSKKGKESATES-EGEK 265
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G ++ ++G KGS +G+ S EGE+G DD
Sbjct: 266 G-DAKKDDKKGKKGSKKGKESATES-EGEKGDAKKDD 300
Score = 103 (41.3 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EGE+G D+ ++G KGS +
Sbjct: 309 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGSKK 365
Query: 61 GER------GMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+ G KG ++ ++ KGS +G+ S EGE+ D
Sbjct: 366 GKESDSKAEGDKGDAKKDDKKDKKGSKKGKESATES-EGEKKDSKKD 411
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 35/100 (35%), Positives = 52/100 (52%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EG++G D+ ++ KGS +
Sbjct: 337 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKE-SDSKAEGDKGDAKKDD-KKDKKGSKK 393
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDE-GERGTKGSD 99
G+ SE GE+ K S + + G K + GE+G + D
Sbjct: 394 GKESATESE-GEK--KDSKKDKAGKKDPTKAGEKGDESKD 430
>UNIPROTKB|P12111 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9606
"Homo sapiens" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] [GO:0005589 "collagen type VI"
evidence=TAS] [GO:0007517 "muscle organ development" evidence=TAS]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030133 "transport vesicle"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0005615 "extracellular space" evidence=IDA]
InterPro:IPR002035 InterPro:IPR002223 InterPro:IPR003961
Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234
PROSITE:PS50279 PROSITE:PS50853 SMART:SM00060 SMART:SM00131
SMART:SM00327 Reactome:REACT_118779 Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007411 GO:GO:0005615 Gene3D:2.60.40.10
InterPro:IPR013783 GO:GO:0004867 GO:GO:0009749 SUPFAM:SSF49265
GO:GO:0030198 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 GO:GO:0005788
GO:GO:0007517 InterPro:IPR008160 Pfam:PF01391 GO:GO:0030133
KO:K06238 MIM:158810 MIM:254090 Orphanet:610 Orphanet:75840
GO:GO:0005589 CTD:1293 eggNOG:NOG237718 HOVERGEN:HBG051052
OrthoDB:EOG4HT8R9 EMBL:X52022 EMBL:AK092021 EMBL:AC112715
EMBL:AC112721 EMBL:BC144595 EMBL:BC150625 EMBL:S49432 EMBL:M20778
EMBL:X06196 EMBL:M27449 IPI:IPI00022200 IPI:IPI00072917
IPI:IPI00220701 IPI:IPI00853061 IPI:IPI00946286 PIR:A59140
RefSeq:NP_004360.2 RefSeq:NP_476505.3 RefSeq:NP_476508.2
UniGene:Hs.233240 PDB:1KNT PDB:1KTH PDB:1KUN PDB:2KNT PDBsum:1KNT
PDBsum:1KTH PDBsum:1KUN PDBsum:2KNT ProteinModelPortal:P12111
SMR:P12111 IntAct:P12111 MINT:MINT-4053347 STRING:P12111
MEROPS:I02.968 PhosphoSite:P12111 DMDM:311033499 PaxDb:P12111
PRIDE:P12111 Ensembl:ENST00000295550 Ensembl:ENST00000353578
Ensembl:ENST00000392003 Ensembl:ENST00000409809
Ensembl:ENST00000472056 GeneID:1293 KEGG:hsa:1293 UCSC:uc002vwl.2
UCSC:uc002vwo.2 GeneCards:GC02M238248 H-InvDB:HIX0002952
HGNC:HGNC:2213 HPA:HPA010080 MIM:120250 neXtProt:NX_P12111
PharmGKB:PA26729 HOGENOM:HOG000015249 InParanoid:P12111 OMA:GRHANTK
PhylomeDB:P12111 ChiTaRS:COL6A3 EvolutionaryTrace:P12111
GenomeRNAi:1293 NextBio:5239 ArrayExpress:P12111 Bgee:P12111
CleanEx:HS_COL6A3 Genevestigator:P12111 GermOnline:ENSG00000163359
Uniprot:P12111
Length = 3177
Score = 134 (52.2 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 38/89 (42%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D +G++G+ GS GE+G G G++G +G
Sbjct: 2089 GQRGVKGS-RGFPGEKG-EVGEIGLDGLDGEDGDKGLPGSS-GEKGNPGR-RGDKGPRG- 2143
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+GERG G G+ G G D ERG KG
Sbjct: 2144 EKGERGDVGI-RGDPGNPGQDSQERGPKG 2171
Score = 115 (45.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 39/105 (37%), Positives = 52/105 (49%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG GR +G RG KG + G ++G D G S + G +G G D G G+ G D
Sbjct: 2130 KGNPGRRGDKGPRGEKG-ERGDVGIRG-DPGNPGQDSQERGPKGETG-DLGPMGVPGRDG 2186
Query: 60 ----EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
GE G G G RG G+ +G +G G EGE+GT+G+
Sbjct: 2187 VPGGPGETGKNGGF-GRRGPPGA-KGNKGGPGQPGFEGEQGTRGA 2229
Score = 107 (42.7 bits), Expect = 0.00031, P = 0.00031
Identities = 40/102 (39%), Positives = 51/102 (50%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
S G+RG GS K + G D +G Y GERG G + G +G +G G+RG
Sbjct: 2037 SGQRGDRGPIGSIGPKGI-PGEDGYRG-YPGDEGGPGERGPPGVN-GTQGFQGCP-GQRG 2092
Query: 65 MKGS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
+KGS E+GE G G D +GE G KG GE+G G
Sbjct: 2093 VKGSRGFPGEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGNPG 2134
Score = 105 (42.0 bits), Expect = 0.00050, P = 0.00050
Identities = 36/102 (35%), Positives = 47/102 (46%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G GE G+ G D +G + GS +KG + D+G RG KG + G+ G++G D
Sbjct: 2101 GEKGEVGEIGLDGLDGEDGDKGLPGSSGEKGN-PGRRGDKGPRGEKG-ERGDVGIRG-DP 2157
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
G G E G +G G D G G G D GE G G
Sbjct: 2158 GNPGQDSQERGPKGETG-DLGPMGVPGRDGVPGGPGETGKNG 2198
>MGI|MGI:88459 [details] [associations]
symbol:Col6a1 "collagen, type VI, alpha 1" species:10090 "Mus
musculus" [GO:0005576 "extracellular region" evidence=ISO]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IDA]
[GO:0042383 "sarcolemma" evidence=IDA] [GO:0043234 "protein
complex" evidence=ISO] [GO:0048407 "platelet-derived growth factor
binding" evidence=ISO] [GO:0070208 "protein heterotrimerization"
evidence=ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IDA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 MGI:MGI:88459 GO:GO:0005576
GO:GO:0043234 GO:GO:0007155 GO:GO:0042383 GO:GO:0005581
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GO:GO:0071230 CTD:1291 eggNOG:NOG256042 HOGENOM:HOG000111863
HOVERGEN:HBG095954 KO:K06238 OrthoDB:EOG4WWRHX OMA:VKENYAE
EMBL:X66405 EMBL:X66406 EMBL:Z18271 IPI:IPI00339885 PIR:S34839
RefSeq:NP_034063.1 UniGene:Mm.2509 ProteinModelPortal:Q04857
SMR:Q04857 STRING:Q04857 PhosphoSite:Q04857 PaxDb:Q04857
PRIDE:Q04857 Ensembl:ENSMUST00000001147 GeneID:12833 KEGG:mmu:12833
UCSC:uc007fux.1 GeneTree:ENSGT00530000063022 InParanoid:Q04857
NextBio:282342 Bgee:Q04857 CleanEx:MM_COL6A1 Genevestigator:Q04857
GermOnline:ENSMUSG00000001119 Uniprot:Q04857
Length = 1025
Score = 128 (50.1 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 45/106 (42%), Positives = 54/106 (50%)
Query: 1 MKG-KGRSVHEGERGMKG--SDEGKYVMKGSD--KGE--YVMKSSDEGERGMKGSDEGER 53
MKG KG +G RG KG ++GK + G D KGE Y +G G G +G
Sbjct: 299 MKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGI-QGPP 357
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKG 97
G KG D G GMKG E+GE G G + G G GS DEG+ G G
Sbjct: 358 GPKG-DAGAFGMKG-EKGEAGADG-EAGRPGNSGSPGDEGDPGEPG 400
Score = 118 (46.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 39/98 (39%), Positives = 52/98 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +EGERG G K + D G G +GMKG ++G RG KGS G +
Sbjct: 261 RGDPGYEGERGKPGLPGEKG--EAGDPGR-PGDLGPVGYQGMKG-EKGSRGEKGS-RGPK 315
Query: 64 GMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
G KG E+G+RG+ G D +GE G G G +G+ G D
Sbjct: 316 GYKG-EKGKRGIDGVDGMKGETGYPGLP-GCKGSPGFD 351
Score = 106 (42.4 bits), Expect = 0.00011, P = 0.00011
Identities = 37/89 (41%), Positives = 47/89 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE- 69
GE+G G DEG G+ GE GERG +G+ G RG +G D GE G +G +
Sbjct: 403 GEKGEAG-DEGNAGPDGAP-GE----RGGPGERGPRGTP-GVRGPRG-DPGEAGPQGDQG 454
Query: 70 -EGERGMKGSDEGERGTKGSDEGERGTKG 97
EG G+ G D GE G G +G RG +G
Sbjct: 455 REGPVGIPG-DSGEAGPIGP-KGYRGDEG 481
>WB|WBGene00003994 [details] [associations]
symbol:pgl-3 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0043186 "P granule" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0043229 "intracellular organelle" evidence=IDA]
GO:GO:0008340 GO:GO:0009792 GO:GO:0003723 GO:GO:0043186
EMBL:FO080620 GeneTree:ENSGT00390000008064 EMBL:AB120729 PIR:T33251
RefSeq:NP_504278.1 UniGene:Cel.7203 IntAct:G5EBV6
EnsemblMetazoa:C18G1.4a GeneID:178867 KEGG:cel:CELE_C18G1.4
CTD:178867 WormBase:C18G1.4a OMA:LEHYENE NextBio:902892
Uniprot:G5EBV6
Length = 693
Score = 125 (49.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 31 GEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDE 90
G++ + G G G+RG +G+ G+RG GS +G RG +G D G RG+ G E
Sbjct: 616 GQFASSNGTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYG--E 673
Query: 91 GERGTKG 97
G RG +G
Sbjct: 674 GSRGYQG 680
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 37 SSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTK 96
+S G+ G G G+RG +G+ G+RG GS +G RG +G D G RG+
Sbjct: 612 ASGFGQFASSNGTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSY 671
Query: 97 G 97
G
Sbjct: 672 G 672
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 29/75 (38%), Positives = 37/75 (49%)
Query: 18 SDEGKYVM-KGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMK 76
S G Y +G D+G + + G+RG GS +G RG +G D G RG G EG RG +
Sbjct: 625 SGRGSYGGGRGGDRGG---RGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYG--EGSRGYQ 679
Query: 77 GSDEGERGTKGSDEG 91
G G G G G
Sbjct: 680 G---GRAGFFGGSRG 691
Score = 96 (38.9 bits), Expect = 0.00084, P = 0.00083
Identities = 26/67 (38%), Positives = 31/67 (46%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
GR + G RG G Y G D+G S +G RG +G D G RG G EG RG
Sbjct: 626 GRGSYGGGRGGDRGGRGAY---GGDRGR---GGSGDGSRGYRGGDRGGRGSYG--EGSRG 677
Query: 65 MKGSEEG 71
+G G
Sbjct: 678 YQGGRAG 684
>UNIPROTKB|G5EBV6 [details] [associations]
symbol:pgl-3 "Protein PGL-3, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0008340 GO:GO:0009792 GO:GO:0003723
GO:GO:0043186 EMBL:FO080620 GeneTree:ENSGT00390000008064
EMBL:AB120729 PIR:T33251 RefSeq:NP_504278.1 UniGene:Cel.7203
IntAct:G5EBV6 EnsemblMetazoa:C18G1.4a GeneID:178867
KEGG:cel:CELE_C18G1.4 CTD:178867 WormBase:C18G1.4a OMA:LEHYENE
NextBio:902892 Uniprot:G5EBV6
Length = 693
Score = 125 (49.1 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 31 GEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDE 90
G++ + G G G+RG +G+ G+RG GS +G RG +G D G RG+ G E
Sbjct: 616 GQFASSNGTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYG--E 673
Query: 91 GERGTKG 97
G RG +G
Sbjct: 674 GSRGYQG 680
Score = 104 (41.7 bits), Expect = 0.00012, P = 0.00012
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 37 SSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTK 96
+S G+ G G G+RG +G+ G+RG GS +G RG +G D G RG+
Sbjct: 612 ASGFGQFASSNGTSGRGSYGGGRGGDRGGRGAYGGDRGRGGSGDGSRGYRGGDRGGRGSY 671
Query: 97 G 97
G
Sbjct: 672 G 672
Score = 103 (41.3 bits), Expect = 0.00015, P = 0.00015
Identities = 29/75 (38%), Positives = 37/75 (49%)
Query: 18 SDEGKYVM-KGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMK 76
S G Y +G D+G + + G+RG GS +G RG +G D G RG G EG RG +
Sbjct: 625 SGRGSYGGGRGGDRGG---RGAYGGDRGRGGSGDGSRGYRGGDRGGRGSYG--EGSRGYQ 679
Query: 77 GSDEGERGTKGSDEG 91
G G G G G
Sbjct: 680 G---GRAGFFGGSRG 691
Score = 96 (38.9 bits), Expect = 0.00084, P = 0.00083
Identities = 26/67 (38%), Positives = 31/67 (46%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
GR + G RG G Y G D+G S +G RG +G D G RG G EG RG
Sbjct: 626 GRGSYGGGRGGDRGGRGAY---GGDRGR---GGSGDGSRGYRGGDRGGRGSYG--EGSRG 677
Query: 65 MKGSEEG 71
+G G
Sbjct: 678 YQGGRAG 684
>ZFIN|ZDB-GENE-041111-303 [details] [associations]
symbol:col6a6 "collagen, type VI, alpha 6"
species:7955 "Danio rerio" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
SMART:SM00131 SMART:SM00327 ZFIN:ZDB-GENE-041111-303 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 EMBL:CR942305 IPI:IPI00900582
Ensembl:ENSDART00000109703 Uniprot:F1Q924
Length = 2543
Score = 131 (51.2 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
S HEG RG +G K + Y + GERG+ G + G RG +G G RG+K
Sbjct: 1552 SGHEGSRGFQGLPGSKGLPGRRGNSGYPGEEGGHGERGLPGLN-GTRGNQGCP-GRRGLK 1609
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G RG G +EG+ G G D GE+G G+
Sbjct: 1610 GGR-GYRGENG-EEGDNGLDGVD-GEQGKTGA 1638
Score = 113 (44.8 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 34/99 (34%), Positives = 50/99 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEG 61
+G G RG+KG G Y + ++G+ + D GE+G G+ GERG G+ G
Sbjct: 1597 RGNQGCPGRRGLKGG-RG-YRGENGEEGDNGLDGVD-GEQGKTGAPGSPGERGDPGNP-G 1652
Query: 62 ERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGS 98
G+ GS G+RG++G D G G + G +G GS
Sbjct: 1653 PTGISGSSGSPGQRGLRG-DPGNSGLDNNARGRKGDAGS 1690
Score = 110 (43.8 bits), Expect = 0.00012, P = 0.00012
Identities = 36/97 (37%), Positives = 51/97 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--DEGERGMKGS 68
G RG +G G+ +KG +G Y ++ +EG+ G+ G D GE+G G+ GERG G+
Sbjct: 1595 GTRGNQGCP-GRRGLKGG-RG-YRGENGEEGDNGLDGVD-GEQGKTGAPGSPGERGDPGN 1650
Query: 69 EEGERGMKGSD--EGERGTKGS------DEGERGTKG 97
G G+ GS G+RG +G D RG KG
Sbjct: 1651 P-GPTGISGSSGSPGQRGLRGDPGNSGLDNNARGRKG 1686
Score = 109 (43.4 bits), Expect = 0.00015, P = 0.00015
Identities = 34/93 (36%), Positives = 45/93 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G S G+RG++G D G + + +G + D G GM+G D G G+ G GE G
Sbjct: 1658 GSSGSPGQRGLRG-DPGNSGLDNNARG----RKGDAGSAGMQG-DPGPDGLAGQS-GENG 1710
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G + G RG G G RG G D G +G G
Sbjct: 1711 RPG-QSGRRGTAGLP-GPRGPPG-DPGLQGLPG 1740
Score = 108 (43.1 bits), Expect = 0.00019, P = 0.00019
Identities = 34/100 (34%), Positives = 49/100 (49%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD 59
+G + EG+ G+ G D +GK GS GE + G G+ GS G+RG++G D
Sbjct: 1615 RGENGEEGDNGLDGVDGEQGKTGAPGSP-GERG-DPGNPGPTGISGSSGSPGQRGLRG-D 1671
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G G+ + G +G GS G +G G D G+ G G
Sbjct: 1672 PGNSGLDNNARGRKGDAGS-AGMQGDPGPDGLAGQSGENG 1710
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 37/97 (38%), Positives = 45/97 (46%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
+GK G GERG G+ G + GS G + G+ G G D RG KG D
Sbjct: 1633 QGKTGAPGSPGERGDPGNP-GPTGISGSS-GSPGQRGL-RGDPGNSGLDNNARGRKG-DA 1688
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G GM+G + G G+ G GE G G G RGT G
Sbjct: 1689 GSAGMQG-DPGPDGLAGQS-GENGRPGQS-GRRGTAG 1722
Score = 107 (42.7 bits), Expect = 0.00024, P = 0.00024
Identities = 35/101 (34%), Positives = 50/101 (49%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSS--DEGERGMKGSDEGERGMKGSD- 59
GR +G RG +G +EG + G D GE + GERG G+ G G+ GS
Sbjct: 1604 GRRGLKGGRGYRGENGEEGDNGLDGVD-GEQGKTGAPGSPGERGDPGNP-GPTGISGSSG 1661
Query: 60 -EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+RG++G + G G+ + G +G GS G +G G D
Sbjct: 1662 SPGQRGLRG-DPGNSGLDNNARGRKGDAGS-AGMQGDPGPD 1700
>UNIPROTKB|B2RNN3 [details] [associations]
symbol:C1QTNF9B "Complement C1q and tumor necrosis
factor-related protein 9B" species:9606 "Homo sapiens" [GO:0005581
"collagen" evidence=IEA] InterPro:IPR008983 HOGENOM:HOG000085653
HOVERGEN:HBG108220 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
eggNOG:NOG266951 EMBL:AL445985 EMBL:BC110413 EMBL:BC137004
EMBL:BC137006 IPI:IPI00550862 IPI:IPI00903064 RefSeq:NP_001007538.1
UniGene:Hs.740810 ProteinModelPortal:B2RNN3 SMR:B2RNN3
STRING:B2RNN3 PRIDE:B2RNN3 Ensembl:ENST00000382057
Ensembl:ENST00000382137 Ensembl:ENST00000382140
Ensembl:ENST00000382145 GeneID:387911 KEGG:hsa:387911
UCSC:uc001uoz.1 UCSC:uc010tcw.2 CTD:387911 GeneCards:GC13M024462
HGNC:HGNC:34072 MIM:614148 neXtProt:NX_B2RNN3 InParanoid:B2RNN3
OMA:CHIAGVC GenomeRNAi:387911 NextBio:101721 Bgee:B2RNN3
Genevestigator:B2RNN3 Uniprot:B2RNN3
Length = 333
Score = 120 (47.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 37/93 (39%), Positives = 51/93 (54%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G+ GE+G +G+D GK KG KG D+G RG G G +G+ G GE+G
Sbjct: 65 GKDGTSGEKGERGAD-GKVEAKGI-KG-------DQGSRGSPGK-HGPKGLAGP-MGEKG 113
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
++G E G +G KG+ +G+ G G EG RG G
Sbjct: 114 LRG-ETGPQGQKGN-KGDVGPTGP-EGPRGNIG 143
>UNIPROTKB|E2RFD8 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS00420
PROSITE:PS50287 SMART:SM00202 GO:GO:0016020 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005044 SUPFAM:SSF56487
GeneTree:ENSGT00640000091447 EMBL:AAEX03011882
Ensembl:ENSCAFT00000007904 NextBio:20851836 Uniprot:E2RFD8
Length = 471
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 36/90 (40%), Positives = 54/90 (60%)
Query: 10 EGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
+GE G++G + GK G+ G+ K S +G+ G+ G +GE G KG D+G+ G+ G
Sbjct: 168 KGEAGLQGPNGAPGKQGAPGTP-GQRGEKGS-KGDGGLVGP-KGEPGAKG-DKGDLGLPG 223
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
S+ G+RGMKG D G G G+ +G +G G
Sbjct: 224 SK-GDRGMKG-DTGVMGPPGA-QGSKGDSG 250
Score = 96 (38.9 bits), Expect = 0.00051, P = 0.00051
Identities = 40/106 (37%), Positives = 50/106 (47%)
Query: 1 MKGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
MKG G G +G KG D GK G G + D+G+ G KG G G GS
Sbjct: 230 MKGDTGVMGPPGAQGSKG-DSGKPGPPGV-AG-FPGTKGDQGQPGEKGLP-GAPGTAGSP 285
Query: 60 --EGERGMKGSE--EGERGMKGSD--EGERGTKGSD--EGERGTKG 97
+GE G GS G G GS G+ G+KG +G++GTKG
Sbjct: 286 GAKGEPGTAGSPGLAGPPGRPGSPGTNGKNGSKGEPGLQGQKGTKG 331
>ZFIN|ZDB-GENE-030131-968 [details] [associations]
symbol:col5a3a "collagen, type V, alpha 3a"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-030131-968 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 HOGENOM:HOG000085654 SMART:SM00210
EMBL:GQ485668 IPI:IPI00773729 RefSeq:NP_001177685.1 UniGene:Dr.2940
GeneID:100330523 KEGG:dre:100330523 CTD:100330523 Uniprot:D6MUD6
Length = 1887
Score = 129 (50.5 bits), Expect = 8.1e-07, P = 8.1e-07
Identities = 39/100 (39%), Positives = 55/100 (55%)
Query: 9 HEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGS--DEGERGMKGSD--EGE 62
+ G RG+KG+D G +KGS +KGE + +GE G+KG D G G +G D EG
Sbjct: 819 YPGPRGVKGAD-GVRGLKGSKGEKGEDGFPGA-KGEMGIKGDRGDNGSPGSRGEDGPEGP 876
Query: 63 RGMKG--SEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
+G G E G G+ G ++G+ G G G +G+KGS
Sbjct: 877 KGQSGPLGEPGSAGIAG-EKGKLGVPGLPGYPGRQGSKGS 915
Score = 118 (46.6 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 39/100 (39%), Positives = 51/100 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKG--SDE 60
GR +G G+ G G G D KGE + G++G KG D+GE G G +
Sbjct: 1163 GRDGEQGPVGLPGP-AGPPGPPGDDGDKGE----TGGPGQKGSKG-DKGEGGPPGPPGSQ 1216
Query: 61 GERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G G +GE G++G +G G KG DEGERG KG+
Sbjct: 1217 GPAGQPGPPGLDGEPGLRGQ-QGMYGPKG-DEGERGFKGA 1254
Score = 112 (44.5 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 38/104 (36%), Positives = 54/104 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSD--EGERGMKGSDEGERGMKGSD 59
KG + G++G KG D+G+ G +G +GE G++G +G G KG D
Sbjct: 1189 KGETGGPGQKGSKG-DKGEGGPPGPPGSQGPAGQPGPPGLDGEPGLRGQ-QGMYGPKG-D 1245
Query: 60 EGERGMKGSE--EGERGMKG--SDEGERGTKGS--DEGERGTKG 97
EGERG KG+ G +GM G ++GE G GS G+ G +G
Sbjct: 1246 EGERGFKGATGPPGLQGMPGPPGEKGESGHVGSMGPPGQHGPRG 1289
Score = 105 (42.0 bits), Expect = 0.00029, P = 0.00029
Identities = 38/106 (35%), Positives = 52/106 (49%)
Query: 1 MKGK-GRSVHEGERGMKGS-----DEGKYVMKGSDKGEYVM-KSSDEGERGMKGSD--EG 51
+KG G + G RG+ GS GK G+D G ++ +G+RG G G
Sbjct: 612 LKGDIGENGPPGPRGLPGSAGPNGKPGKRGRSGADGGRGAPGETGAKGDRGFDGLPGLPG 671
Query: 52 ERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G +G D G+ G +G GE G KGSD G G +G GE G +G
Sbjct: 672 NKGHRG-DRGKPGPQGPH-GEPGHKGSD-GPVGPRGQP-GEPGIRG 713
Score = 96 (38.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 41 GERGMKGSDEGERGMKGSD--EGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTK 96
G+RG G+D G RG G +G+RG G G +G +G D G+ G +G GE G K
Sbjct: 638 GKRGRSGADGG-RGAPGETGAKGDRGFDGLPGLPGNKGHRG-DRGKPGPQGP-HGEPGHK 694
Query: 97 GSD 99
GSD
Sbjct: 695 GSD 697
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKG 31
KGK +G++G K S + K + ++G
Sbjct: 277 KGKKNKKRKGKKGKKESRKKKKEAEALEEG 306
>FB|FBgn0259244 [details] [associations]
symbol:CG42342 species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014297 GO:GO:0016021 GO:GO:0005886
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GeneTree:ENSGT00700000104250 EMBL:BT003557 RefSeq:NP_001138061.1
RefSeq:NP_001138062.1 RefSeq:NP_001138063.1 RefSeq:NP_001138064.1
UniGene:Dm.18604 EnsemblMetazoa:FBtr0299894 GeneID:7354466
KEGG:dme:Dmel_CG42342 FlyBase:FBgn0259244 InParanoid:Q86NZ7
OrthoDB:EOG405QHP ChiTaRS:CG42342 GenomeRNAi:7354466
NextBio:20902896 Bgee:B7Z0K8 Uniprot:B7Z0K8
Length = 822
Score = 125 (49.1 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 41/109 (37%), Positives = 58/109 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
GR GE+G KG D+G + G +GE S G+ G+ G+ +GE G KG + G+
Sbjct: 642 GRKGDPGEKGHKG-DQGPMGLPGPMGMRGESG-PSGPSGKAGIPGA-QGETGHKG-ERGD 697
Query: 63 RGMKGSE-----EGERGMKGS-----DEGERGTKGS--DEGERGTKGSD 99
G+ G++ EG RG +GS G+RG KG D+GE+G G D
Sbjct: 698 PGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLD 746
Score = 119 (46.9 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 36/99 (36%), Positives = 53/99 (53%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKS--SDEGERGMKGSDEGERGMKGSDE 60
G + +GERG+ G D G+ KG D+G + GE G G G+ G+ G+ +
Sbjct: 630 GHTGSQGERGLDGRKGDPGEKGHKG-DQGPMGLPGPMGMRGESGPSGPS-GKAGIPGA-Q 686
Query: 61 GERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
GE G KG E G+ G+ G+D G+ G +G ++G RG G
Sbjct: 687 GETGHKG-ERGDPGLPGTDGIPGQEGPRG-EQGSRGDAG 723
>UNIPROTKB|P20785 [details] [associations]
symbol:COL6A1 "Collagen alpha-1(VI) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 GO:GO:0007155 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 EMBL:X64458 EMBL:X57998 EMBL:J04598
EMBL:X57987 IPI:IPI00822166 PIR:A32856 RefSeq:NP_990438.1
UniGene:Gga.3110 ProteinModelPortal:P20785 STRING:P20785
PRIDE:P20785 GeneID:396000 KEGG:gga:396000 CTD:1291
eggNOG:NOG256042 HOGENOM:HOG000111863 HOVERGEN:HBG095954
InParanoid:P20785 KO:K06238 OrthoDB:EOG4WWRHX NextBio:20816063
Uniprot:P20785
Length = 1019
Score = 126 (49.4 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 43/96 (44%), Positives = 55/96 (57%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGE---RGMKGSDEGERGMKGSDEGERGM 65
HEGERG G G+ KG D G+ + D G +GMKG D+G RG KGS G +G
Sbjct: 265 HEGERGKPGLP-GQ---KG-DAGD-PGRPGDMGPVGYQGMKG-DKGSRGEKGS-RGAKGA 316
Query: 66 KGSEEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
KG E+G+RG+ G D +GE G G G +G+ G D
Sbjct: 317 KG-EKGKRGIDGIDGMKGEAGYPGLP-GCKGSPGFD 350
Score = 118 (46.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 42/105 (40%), Positives = 54/105 (51%)
Query: 1 MKG-KGRSVHEGERGMKGS--DEGKYVMKGSD--KGE--YVMKSSDEGERGMKGSDEGER 53
MKG KG +G RG KG+ ++GK + G D KGE Y +G G G+ +G
Sbjct: 298 MKGDKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGT-QGPP 356
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G KG D G G KG + GE G G G +G GS GE+G G+
Sbjct: 357 GPKG-DPGAYGPKGGK-GEPGEDGKP-GRQGIPGSP-GEKGAPGN 397
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
GKG +G+ G +G G KG+ ++GE + G+ G G+D G G +GS+
Sbjct: 370 GKGEPGEDGKPGRQGIP-GSPGEKGAPGNRGE-PGPLGETGDEGSPGAD-GPPGERGSN- 425
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GERG GS G+RG +G D GE G G D+G G G
Sbjct: 426 GERGPPGSP-GDRGPRG-DLGEPGPPG-DQGREGPLG 459
Score = 108 (43.1 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 37/91 (40%), Positives = 49/91 (53%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD--EGERGMK 66
G +GMKG D+G KGS +G K ++G+RG+ G D +GE G G +G G
Sbjct: 294 GYQGMKG-DKGSRGEKGS-RGAKGAKG-EKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFD 350
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G++ G G KG D G G KG +GE G G
Sbjct: 351 GTQ-GPPGPKG-DPGAYGPKGG-KGEPGEDG 378
>RGD|1565398 [details] [associations]
symbol:Col6a1 "collagen, type VI, alpha 1" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005576
"extracellular region" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0031012 "extracellular
matrix" evidence=IEA;ISO] [GO:0042383 "sarcolemma"
evidence=IEA;ISO] [GO:0043234 "protein complex" evidence=IEA;ISO]
[GO:0048407 "platelet-derived growth factor binding"
evidence=IEA;ISO] [GO:0070208 "protein heterotrimerization"
evidence=IEA;ISO] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA;ISO] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 RGD:1565398 GO:GO:0005576
GO:GO:0043234 GO:GO:0042383 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GO:GO:0071230 OrthoDB:EOG4WWRHX
OMA:VKENYAE GeneTree:ENSGT00530000063022 IPI:IPI00371853
PRIDE:D3ZUL3 Ensembl:ENSRNOT00000001679 Uniprot:D3ZUL3
Length = 1025
Score = 126 (49.4 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 44/106 (41%), Positives = 54/106 (50%)
Query: 1 MKG-KGRSVHEGERGMKG--SDEGKYVMKGSD--KGE--YVMKSSDEGERGMKGSDEGER 53
MKG KG +G RG KG ++GK + G D KGE Y +G G G +G
Sbjct: 299 MKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLPGCKGSPGFDGI-QGPP 357
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G KG D G G+KG E+GE G +G + G G G DEGE G G
Sbjct: 358 GPKG-DAGAFGLKG-EKGEAGAEG-EAGRPGNSGPPGDEGEPGEPG 400
Score = 118 (46.6 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 39/98 (39%), Positives = 52/98 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +EGERG G K + D G G +GMKG ++G RG KGS G +
Sbjct: 261 RGDPGYEGERGKPGLPGEKG--EAGDPGR-PGDLGPVGYQGMKG-EKGSRGEKGS-RGPK 315
Query: 64 GMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
G KG E+G+RG+ G D +GE G G G +G+ G D
Sbjct: 316 GYKG-EKGKRGIDGVDGMKGETGYPGLP-GCKGSPGFD 351
>UNIPROTKB|E1BB91 [details] [associations]
symbol:COL6A3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
PROSITE:PS50853 SMART:SM00060 SMART:SM00131 SMART:SM00327
GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022 OMA:GRHANTK
EMBL:DAAA02009362 IPI:IPI00716166 Ensembl:ENSBTAT00000018479
Uniprot:E1BB91
Length = 3170
Score = 131 (51.2 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D +G++G+ G+ GE+G G G++G KG
Sbjct: 2090 GQRGVKGS-RGFPGEKG-ELGEIGLDGLDGEDGDKGLPGTS-GEKGSPGR-RGDKGPKG- 2144
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
++GERG G G+ G G D +RG KG
Sbjct: 2145 DKGERGDVGI-RGDPGNSGQDSQQRGAKG 2172
Score = 114 (45.2 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 37/98 (37%), Positives = 49/98 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG GE+G G + G + G D G+ + + GE+G G G++G KG D+GER
Sbjct: 2095 KGSRGFPGEKGELG-EIGLDGLDGED-GDKGLPGTS-GEKGSPGR-RGDKGPKG-DKGER 2149
Query: 64 GMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKGSD 99
G G G+ G G D +RG KG D G G G D
Sbjct: 2150 GDVGIR-GDPGNSGQDSQQRGAKGETGDIGPVGLPGRD 2186
Score = 108 (43.1 bits), Expect = 0.00024, P = 0.00024
Identities = 40/102 (39%), Positives = 52/102 (50%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
S G+RG GS K + G D +G Y GERG G + G +G +G G+RG
Sbjct: 2038 SGQRGDRGPIGSIGPKGI-PGEDGYRG-YPGDEGGPGERGPPGVN-GTQGFQGCP-GQRG 2093
Query: 65 MKGS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
+KGS E+GE G G D +GE G KG GE+G+ G
Sbjct: 2094 VKGSRGFPGEKGELGEIGLDGLDGEDGDKGLPGTSGEKGSPG 2135
>UNIPROTKB|I3LS72 [details] [associations]
symbol:COL6A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 GO:GO:0005576 GO:GO:0043234 GO:GO:0042383
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GO:GO:0071230 GeneTree:ENSGT00530000063022
Ensembl:ENSSSCT00000024347 OMA:KDRYYRC Uniprot:I3LS72
Length = 435
Score = 121 (47.7 bits), Expect = 9.0e-07, P = 9.0e-07
Identities = 38/98 (38%), Positives = 51/98 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +EGERG G K + D G + D G G +G ++G RG KGS G +
Sbjct: 233 RGDPGYEGERGKPGLPGEKG--EAGDPG----RPGDLGPVGYQGGEKGSRGEKGS-RGPK 285
Query: 64 GMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
G KG E+G+RG+ G D +GE G G G +G G D
Sbjct: 286 GYKG-EKGKRGIDGVDGMKGETGYPGLP-GCKGLPGFD 321
Score = 105 (42.0 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 41/113 (36%), Positives = 55/113 (48%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGERGMKG 57
KG +G RG KG ++GK + G D KGE G +G+ G D +G G KG
Sbjct: 273 KGSRGEKGSRGPKGYKGEKGKRGIDGVDGMKGETGYPGLP-GCKGLPGFDGVQGPPGPKG 331
Query: 58 SDEGERGMKGSE-----EGERGMKGS-----DEGERGTKG--SDEGERGTKGS 98
D G G+KG + +GE G G+ DEGE G G +GE G +G+
Sbjct: 332 -DAGAFGLKGEKGEPGADGEPGRPGNTGPPGDEGEPGEPGPPGGKGEAGDEGN 383
>RGD|1589662 [details] [associations]
symbol:Marco "macrophage receptor with collagenous structure"
species:10116 "Rattus norvegicus" [GO:0006897 "endocytosis"
evidence=ISO] [GO:0043277 "apoptotic cell clearance" evidence=ISO]
REFSEQ:NM_001109011 Ncbi:NP_001102481
Length = 519
Score = 122 (48.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 42/102 (41%), Positives = 56/102 (54%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG KG + +GE G KG D+G + GS KG+ MK G+RG+ GS G +G KG D
Sbjct: 231 KGDKGLTGPKGEHGTKG-DKGDLGLPGS-KGDTGMK----GDRGVTGSP-GAQGNKG-DA 282
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
G+ G+ G G G KG D+G+ G +G G+ G KG
Sbjct: 283 GKPGLPGLA-GSPGAKG-DQGKLGVQGPPGPPGAPGQSGAKG 322
Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 38/100 (38%), Positives = 56/100 (56%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSD-----KGEYVMKSSDEGERGMKGSD--EGERGMKG 57
G S +GE+G G D G ++G KGE ++ G G +G+D G +G KG
Sbjct: 172 GPSAAKGEKGAAGRD-GTPGVRGPQGPPGTKGEAGLQGFT-GAPGKQGADGAPGPQGEKG 229
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
S +G++G+ G + GE G KG D+G+ G GS +G+ G KG
Sbjct: 230 S-KGDKGLTGPK-GEHGTKG-DKGDLGLPGS-KGDTGMKG 265
Score = 113 (44.8 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 39/92 (42%), Positives = 52/92 (56%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G + + G G+KGS D G KG+ KGE S G G KG D G G+ G +GE
Sbjct: 337 GIAGNPGAAGLKGSKGDIGIQGQKGT-KGE----SGVPGLVGRKG-DTGSPGLAGP-KGE 389
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
G G + GE GMKGS G++G KG ++G++G
Sbjct: 390 PGRAGLK-GEPGMKGSS-GQQGQKG-EKGQKG 418
Score = 94 (38.1 bits), Expect = 0.00095, P = 0.00095
Identities = 38/107 (35%), Positives = 53/107 (49%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
MKG +G + G +G KG D GK + G G K D+G+ G++G G G G
Sbjct: 263 MKGDRGVTGSPGAQGNKG-DAGKPGLPGL-AGSPGAKG-DQGKLGVQGPPGPPGAPGQSG 319
Query: 58 SDEGERGMKG--SEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
+ +GE G G G G+ G+ G G KGS +G++GTKG
Sbjct: 320 A-KGEPGRTGPPGPTGPPGIAGNP-GAAGLKGSKGDIGIQGQKGTKG 364
>UNIPROTKB|E2RFD9 [details] [associations]
symbol:MARCO "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016020 "membrane" evidence=IEA] [GO:0005044
"scavenger receptor activity" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS00420
PROSITE:PS50287 SMART:SM00202 GO:GO:0016020 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005044 SUPFAM:SSF56487 OMA:WVRVSHE
GeneTree:ENSGT00640000091447 EMBL:AAEX03011882
Ensembl:ENSCAFT00000007902 Uniprot:E2RFD9
Length = 519
Score = 122 (48.0 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 36/90 (40%), Positives = 54/90 (60%)
Query: 10 EGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
+GE G++G + GK G+ G+ K S +G+ G+ G +GE G KG D+G+ G+ G
Sbjct: 201 KGEAGLQGPNGAPGKQGAPGTP-GQRGEKGS-KGDGGLVGP-KGEPGAKG-DKGDLGLPG 256
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
S+ G+RGMKG D G G G+ +G +G G
Sbjct: 257 SK-GDRGMKG-DTGVMGPPGA-QGSKGDSG 283
Score = 116 (45.9 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 35/83 (42%), Positives = 50/83 (60%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G+ G KG + G KG+ KGE S G GMKG + G G++G G G+KG ++
Sbjct: 346 GKNGSKG-EPGLQGQKGT-KGE----SGVPGPAGMKG-EMGSPGLEGP-RGASGLKG-QK 396
Query: 71 GERGMKGSDEGERGTKGSDEGER 93
GE GMKGS G++GT+G +G++
Sbjct: 397 GEPGMKGSP-GQQGTQGQ-KGQK 417
Score = 96 (38.9 bits), Expect = 0.00058, P = 0.00058
Identities = 40/106 (37%), Positives = 50/106 (47%)
Query: 1 MKGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
MKG G G +G KG D GK G G + D+G+ G KG G G GS
Sbjct: 263 MKGDTGVMGPPGAQGSKG-DSGKPGPPGV-AG-FPGTKGDQGQPGEKGLP-GAPGTAGSP 318
Query: 60 --EGERGMKGSE--EGERGMKGSD--EGERGTKGSD--EGERGTKG 97
+GE G GS G G GS G+ G+KG +G++GTKG
Sbjct: 319 GAKGEPGTAGSPGLAGPPGRPGSPGTNGKNGSKGEPGLQGQKGTKG 364
>ZFIN|ZDB-GENE-050707-1 [details] [associations]
symbol:otol1a "otolin 1a" species:7955 "Danio rerio"
[GO:0048840 "otolith development" evidence=IMP] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR008983 ZFIN:ZDB-GENE-050707-1
GeneTree:ENSGT00700000104099 HOGENOM:HOG000085653
HOVERGEN:HBG108220 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
GO:GO:0048840 EMBL:BX927289 EMBL:AB124554 IPI:IPI00495032
RefSeq:NP_001093211.1 UniGene:Dr.92886 ProteinModelPortal:A5PN28
STRING:A5PN28 Ensembl:ENSDART00000019236 Ensembl:ENSDART00000132859
GeneID:553759 KEGG:dre:553759 CTD:553759 eggNOG:NOG122858
InParanoid:Q60HI2 OMA:FYNGEGH OrthoDB:EOG48PMM8 NextBio:20880481
Bgee:A5PN28 Uniprot:A5PN28
Length = 489
Score = 121 (47.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 41/107 (38%), Positives = 55/107 (51%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSD- 59
G+ +GE G KG D G +KG D GE + G G KG + G++G+ G
Sbjct: 190 GKQGEKGESGPKGDKGDTGFPGLKG-DPGE----RGEPGWNGTKGGMGEPGKQGLTGPPG 244
Query: 60 ----EGERGMKGS-EEGERGMKGS--DEGERGTKGSDEGERGTKGSD 99
+GE+G KG GE+G KGS + G +G KG D G GT G+D
Sbjct: 245 PDGIKGEKGDKGDCPFGEKGQKGSIGEPGPQGPKG-DPGVPGTNGTD 290
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/101 (38%), Positives = 51/101 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSS--DEGERGMKGSDEGERGMKGSDEG 61
KG G G+ G G +G +KGE K D G G+KG D GERG G +
Sbjct: 171 KGEKGDTGASGLPGIP-GVTGKQG-EKGESGPKGDKGDTGFPGLKG-DPGERGEPGWNGT 227
Query: 62 ERGM-KGSEEGERGMKGSD--EGERGTKGSDE-GERGTKGS 98
+ GM + ++G G G D +GE+G KG GE+G KGS
Sbjct: 228 KGGMGEPGKQGLTGPPGPDGIKGEKGDKGDCPFGEKGQKGS 268
Score = 107 (42.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 36/92 (39%), Positives = 46/92 (50%)
Query: 11 GERGMKGSDEGKYVM-KGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSD--EGERGM 65
GE+G+ G GK M G+ + + G G+KG D G G+ G G++G
Sbjct: 136 GEKGLPGIPGGKGEMGPPGPPGQEGLTGAP-GTHGVKGEKGDTGASGLPGIPGVTGKQGE 194
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
KG E G +G KG D G G KG D GERG G
Sbjct: 195 KG-ESGPKGDKG-DTGFPGLKG-DPGERGEPG 223
>ZFIN|ZDB-GENE-070802-4 [details] [associations]
symbol:col4a3 "collagen, type IV, alpha 3"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 ZFIN:ZDB-GENE-070802-4 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0005201 Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772
EMBL:BX571880 IPI:IPI01006112 Ensembl:ENSDART00000049849
Bgee:F1R5V4 Uniprot:F1R5V4
Length = 1664
Score = 127 (49.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/102 (37%), Positives = 56/102 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
KG G +G KG D + D+G + K+ +GE G G D+G RG+KG+ +G+
Sbjct: 1326 KGCKGSPGTKGPKGCDYTVEIFSTPGDRG-FRGKTGQKGEPGDNG-DKGLRGLKGT-KGQ 1382
Query: 63 RGMKGSE--EGERGMKG--SDEGERGTKGSD--EGERGTKGS 98
+G G+ +G +GM G D GE+G KG+ GE G KG+
Sbjct: 1383 KGDIGANGPDGSKGMLGLQGDSGEKGLKGARGLTGEVGAKGA 1424
Score = 103 (41.3 bits), Expect = 0.00041, P = 0.00041
Identities = 32/83 (38%), Positives = 48/83 (57%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G++ +GE G G D+G +KG+ KG+ D G G GS +G G++G D GE+
Sbjct: 1356 RGKTGQKGEPGDNG-DKGLRGLKGT-KGQ----KGDIGANGPDGS-KGMLGLQG-DSGEK 1407
Query: 64 GMKGSE--EGERGMKGSDEGERG 84
G+KG+ GE G KG+ G +G
Sbjct: 1408 GLKGARGLTGEVGAKGAP-GAKG 1429
>UNIPROTKB|F1MD40 [details] [associations]
symbol:COL6A6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031012 "extracellular matrix" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GeneTree:ENSGT00530000063022 OMA:KRLMKRH EMBL:DAAA02003665
EMBL:DAAA02003666 EMBL:DAAA02003667 IPI:IPI00687099
Ensembl:ENSBTAT00000017057 Uniprot:F1MD40
Length = 2270
Score = 128 (50.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/105 (38%), Positives = 57/105 (54%)
Query: 2 KG-KGRSVHEGERGMKGSD-----EGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGER 53
KG +G + EGE G G D +G + G+ KGE ++ + GERG+ G D G +
Sbjct: 1446 KGNRGLNGQEGEAGESGIDGLNGEQGDSGLPGA-KGEKGIEGAQGIPGERGISG-DHGAK 1503
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G++G D G G S EG +G+KG + G +G +G G GT GS
Sbjct: 1504 GLRG-DPGVPGFDNSIEGPKGLKG-ELGRQGRRGQP-GPPGTPGS 1545
Score = 101 (40.6 bits), Expect = 0.00094, P = 0.00094
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGERGMKG 57
+G + +G+ G+ G D G +KG +GE +K ++G G KG G G G
Sbjct: 1555 RGHTGPQGKPGIPGPDGLAGSLGLKGPQGPRGEAGVKG-EKGNLGSKGPQGLPGPAGEAG 1613
Query: 58 SDE--GERGMKGSEEGERGMKGSD--EGERGTKGSDE-------GERGTKGSDDY 101
S G +G KG E G+ G+KG+ G RG G D G RG KG + +
Sbjct: 1614 SQGRLGSQGNKG-EPGDLGIKGAIGLRGPRGLPGDDGNPAYGSVGSRGAKGQEGF 1667
>UNIPROTKB|F1PS65 [details] [associations]
symbol:OTOL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008983 GeneTree:ENSGT00700000104099 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 OMA:PFENFTL EMBL:AAEX03017335
RefSeq:XP_003640182.1 Ensembl:ENSCAFT00000003986 GeneID:100855781
KEGG:cfa:100855781 Uniprot:F1PS65
Length = 462
Score = 120 (47.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 35/92 (38%), Positives = 54/92 (58%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS- 68
+GERG G G+ KGS KG+ + +G++G +G+ G G+KG + G +G KG
Sbjct: 175 KGERGNIGL-AGEKGQKGS-KGD-TCANGTQGDKGDQGA-VGSPGLKG-EPGAKGEKGDC 229
Query: 69 -EEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
E GE G KG ++G+ G KG ++G +G G +
Sbjct: 230 GESGEMGGKG-EKGQEGLKG-EKGSKGDPGME 259
Score = 113 (44.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 39/104 (37%), Positives = 56/104 (53%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSS-----DEGERGMKGSDEGERGM 55
KG KG + G +G KG D+G G KGE K + GE G KG ++G+ G+
Sbjct: 190 KGSKGDTCANGTQGDKG-DQGAVGSPGL-KGEPGAKGEKGDCGESGEMGGKG-EKGQEGL 246
Query: 56 KGS--DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
KG +G+ GM+G + G G+ G+ G+ G KG ++GE G G
Sbjct: 247 KGEKGSKGDPGMEG-KGGPAGLPGAP-GDPGKKG-EKGELGPPG 287
Score = 112 (44.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 39/94 (41%), Positives = 50/94 (53%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
M GKG EG +G KGS +G M+G KG G+ G KG ++GE G G
Sbjct: 235 MGGKGEKGQEGLKGEKGS-KGDPGMEG--KGGPAGLPGAPGDPGKKG-EKGELGPPGL-V 289
Query: 61 GERGMKGSEEGERGMKGS--DEGERGTKGSDEGE 92
G G KG E G +G +GS +G RG +GS +GE
Sbjct: 290 GPMGPKG-EVGSKGGRGSVGKKGSRGLRGS-KGE 321
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G +GE+G+KG D+G + G Y K + G G KG + G G+ G ++G
Sbjct: 136 QGPKGQKGEKGLKGERGDQGTSGVPG-----YPGKPGEPGGLGPKG-ERGNIGLAG-EKG 188
Query: 62 ERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
++G KG G +G KG D+G G+ G +GE G KG
Sbjct: 189 QKGSKGDTCANGTQGDKG-DQGAVGSPGL-KGEPGAKG 224
>UNIPROTKB|F1NL02 [details] [associations]
symbol:COL22A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005587 "collagen type IV" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104250 OMA:KRENGAQ EMBL:AADN02037495
EMBL:AADN02037496 EMBL:AADN02037497 EMBL:AADN02037498
IPI:IPI00577055 Ensembl:ENSGALT00000026109 Uniprot:F1NL02
Length = 1588
Score = 126 (49.4 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/101 (41%), Positives = 57/101 (56%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGS 58
KG+ GR+ GE+G KGS G G D KGE + + G+ G G G G KGS
Sbjct: 481 KGESGRAYSRGEKGEKGS-LGLPGTPGKDGAKGE----AGEPGQPGAFGLP-GPAGPKGS 534
Query: 59 D--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ +G G+KG G G++G + GE+GT+G D+GERG G
Sbjct: 535 EGKQGPPGIKGYV-GAPGLQG-ERGEKGTRG-DKGERGLDG 572
Score = 116 (45.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/102 (37%), Positives = 54/102 (52%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDE 60
G+S G G G D G + G KGE K + G+ G KG + G RG G ++
Sbjct: 708 GKSGPPGPAGSPGKD-GLNGLPGLPGQKGEQGEKGEEGSPGKAGPKG-EPGSRGQPG-EQ 764
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
GE G+ G + G G++G ++G++G KG D +GERG KG
Sbjct: 765 GEVGLPGLQ-GLPGLRG-EKGDQGGKGKDGLPGLKGERGEKG 804
Score = 115 (45.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/104 (39%), Positives = 54/104 (51%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
KG+ S+ EG +G KG + G + G +KGE ++ GE+G KGS G G G
Sbjct: 451 KGERGSIGPEGPKGQKG-ESGSQGLPGPRGEKGESG-RAYSRGEKGEKGS-LGLPGTPGK 507
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
D G +G G E G+ G G G G KGS EG++G G YV
Sbjct: 508 D-GAKGEAG-EPGQPGAFGLP-GPAGPKGS-EGKQGPPGIKGYV 547
>WB|WBGene00000702 [details] [associations]
symbol:col-128 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR008160
Pfam:PF01391 EMBL:Z73425 GeneTree:ENSGT00680000100597 PIR:T20800
RefSeq:NP_502175.1 ProteinModelPortal:Q19368 SMR:Q19368
STRING:Q19368 EnsemblMetazoa:F12F6.9 GeneID:178076
KEGG:cel:CELE_F12F6.9 UCSC:F12F6.9 CTD:178076 WormBase:F12F6.9
eggNOG:NOG281327 HOGENOM:HOG000017938 InParanoid:Q19368 OMA:FPYLISQ
NextBio:899614 Uniprot:Q19368
Length = 427
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/97 (32%), Positives = 56/97 (57%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G++ ++G G++G D + +M+ + + + +GERG G+ G+RG G D+G++G
Sbjct: 89 GQAGNDGPNGIRGLD-ARDIMEEIQANQECI-TCPQGERGPTGAP-GDRGETG-DKGDKG 144
Query: 65 MKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
+ G G+ G+ G ++GE G G G RG KG+D
Sbjct: 145 VAGIP-GQDGLDG-EQGEEGPVGPSGPPGRRGRKGAD 179
>UNIPROTKB|E2R8U5 [details] [associations]
symbol:COL24A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 InterPro:IPR008985 SUPFAM:SSF49899
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
Pfam:PF02210 GO:GO:0005201 SMART:SM00210 OMA:FPGDFGD
GeneTree:ENSGT00700000104301 EMBL:AAEX03004847 EMBL:AAEX03004848
EMBL:AAEX03004849 EMBL:AAEX03004850 Ensembl:ENSCAFT00000035747
Uniprot:E2R8U5
Length = 1710
Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/93 (39%), Positives = 56/93 (60%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GE+G++G+ +G+ +G +G Y + K+ + GERG++G G +G GS GERG++G
Sbjct: 932 GEQGIQGA-KGEKGDQGK-RGPYGLIGKTGNPGERGVQGKP-GLQGPPGST-GERGLEG- 986
Query: 69 EEGERGMKGS--DEGERGTKGSD--EGERGTKG 97
E G RG++G GE G +G EGE G G
Sbjct: 987 EPGPRGLQGDAGPPGEMGAEGPSGIEGESGLPG 1019
Score = 111 (44.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 37/96 (38%), Positives = 54/96 (56%)
Query: 9 HEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG-----SDEG 61
H G RG GS +G+ +G D G + + +G +G KG D+G+RG G + G
Sbjct: 906 HVGARGPPGSQGPKGQRGPRGPD-G-LLGEQGIQGAKGEKG-DQGKRGPYGLIGKTGNPG 962
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG++G + G +G GS GERG +G + G RG +G
Sbjct: 963 ERGVQG-KPGLQGPPGST-GERGLEG-EPGPRGLQG 995
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 37/106 (34%), Positives = 52/106 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSD--E 60
G++ + GERG++G G GS GE ++ + G RG++G GE G +G E
Sbjct: 956 GKTGNPGERGVQGKP-GLQGPPGST-GERGLEG-EPGPRGLQGDAGPPGEMGAEGPSGIE 1012
Query: 61 GERGMKGSEEGERGMKGSD-----EGERGTKGSD--EGERGTKGSD 99
GE G+ G E G +G G GE G +G GE G +G D
Sbjct: 1013 GESGLPG-EPGAKGNVGPAGNVGVAGEPGLRGEPGAPGEEGLQGKD 1057
>UNIPROTKB|B4DW79 [details] [associations]
symbol:MARCO "Macrophage receptor MARCO" species:9606 "Homo
sapiens" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS00420
PROSITE:PS50287 SMART:SM00202 GO:GO:0016020 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005044 SUPFAM:SSF56487 HOVERGEN:HBG004933
UniGene:Hs.67726 HGNC:HGNC:6895 EMBL:AC013457 EMBL:AK301407
IPI:IPI00917216 SMR:B4DW79 STRING:B4DW79 Ensembl:ENST00000541757
Uniprot:B4DW79
Length = 442
Score = 119 (46.9 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 11 GERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G G+KGS D G +G KGE S G G+KG ++G G+ G +G G G
Sbjct: 265 GATGLKGSKGDTGLQGQQGR-KGE----SGVPGPAGVKG-EQGSPGLAGP-KGAPGQAG- 316
Query: 69 EEGERGMKGSDEGERGTKGSDEGERG 94
++G++G+KGS GE+G KG ++GERG
Sbjct: 317 QKGDQGVKGSS-GEQGVKG-EKGERG 340
Score = 112 (44.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 10 EGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
+GE G++G GK G+ G K S +G+ G+ G +GE G KG ++G+ G+ G
Sbjct: 123 KGEAGLQGPQGAPGKQGATGTP-GPQGEKGS-KGDGGLIGP-KGETGTKG-EKGDLGLPG 178
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
S+ G+RGMKG D G G G+ +G +G G
Sbjct: 179 SK-GDRGMKG-DAGVMGPPGA-QGSKGDFG 205
Score = 104 (41.7 bits), Expect = 6.4e-05, P = 6.3e-05
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 9 HEGERGMKGS--DEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
H G +G GS G+ + GS G +K S +G+ G++G +G +G G G G
Sbjct: 239 HPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS-KGDTGLQGQ-QGRKGESGVP-GPAG 295
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
+KG E+G G+ G +G G G +G++G KGS
Sbjct: 296 VKG-EQGSPGLAGP-KGAPGQAGQ-KGDQGVKGS 326
>UNIPROTKB|E1C989 [details] [associations]
symbol:E1C989 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234
PROSITE:PS50279 SMART:SM00131 SMART:SM00327 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 EMBL:AADN02000760 EMBL:AADN02000757
EMBL:AADN02000758 EMBL:AADN02000759 IPI:IPI00682836
Ensembl:ENSGALT00000016692 Uniprot:E1C989
Length = 1124
Score = 124 (48.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 41/107 (38%), Positives = 60/107 (56%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
+KG KG G++G +G + G KG + KG++ K +EG G KG ++GERG GS
Sbjct: 246 IKGDKGDPGDAGDKGERG-EPGPKGNKGDAQKGDHGEKG-EEGAPGYKG-EKGERGECGS 302
Query: 59 D--EGERGMKG--SEEGERGMKG--SDEGERGTKG--SDEGERGTKG 97
+GERG++G G RG +G G+ G KG ++GE+G G
Sbjct: 303 PGLKGERGLEGPFGPRGPRGPQGISGPPGQPGLKGIQGNKGEQGPLG 349
Score = 116 (45.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 2 KGK-GRSVHEGERGMKGS-DEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
KG G S + G++G KGS G+ + + + + D+GE+G +G +GE+G+ G
Sbjct: 516 KGDVGDSGNPGKKG-KGSLIVGRCLAEMGPSDNFPKPNGDQGEKGSRGLTGSKGEKGLAG 574
Query: 58 SDEGERGMKGSEEGERGMKGSD-EGERGTKGSDEGERGTKGSDDY 101
+GE G E G G+ GS EG G KG D+G G G D +
Sbjct: 575 P-KGEPG----ERGPPGVNGSSIEGPAGPKG-DQGPIGPPGEDGF 613
Score = 107 (42.7 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 40/105 (38%), Positives = 51/105 (48%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGS----DKGEYVMKSSDEGERGMKG-SDEGERGMKG 57
G+G +GE+G KGS G + G DKGE + G G G + G +G++G
Sbjct: 405 GEGIQGQKGEKGSKGS-VGPVGLPGQTIKGDKGEQG-QVGPRGPAGPPGFGNPGSQGIQG 462
Query: 58 SDEGERGMKGSEE-GERGMKGSDEGERGTKGSDE----GERGTKG 97
G G KGS+ G G+KG GERG KG G RG KG
Sbjct: 463 PP-GNPGAKGSKGLGLPGLKGQ-RGERGQKGEPGLPTVGLRGLKG 505
>MGI|MGI:88465 [details] [associations]
symbol:Col9a1 "collagen, type IX, alpha 1" species:10090 "Mus
musculus" [GO:0001894 "tissue homeostasis" evidence=IMP]
[GO:0003417 "growth plate cartilage development" evidence=IGI;IMP]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005594 "collagen type IX"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051216 "cartilage development" evidence=IMP] MGI:MGI:88465
GO:GO:0046872 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0001894
HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025
HOVERGEN:HBG004933 SMART:SM00210 OrthoDB:EOG4P2Q36 CTD:1297
KO:K08131 GO:GO:0003417 EMBL:D17511 EMBL:L12215 EMBL:X57984
EMBL:M32136 EMBL:M32132 EMBL:M32134 IPI:IPI00230262 IPI:IPI00758037
PIR:A35980 PIR:S40495 PIR:S42617 RefSeq:NP_031766.3
UniGene:Mm.154662 ProteinModelPortal:Q05722 SMR:Q05722
STRING:Q05722 PhosphoSite:Q05722 PRIDE:Q05722 GeneID:12839
KEGG:mmu:12839 InParanoid:Q05722 NextBio:282364 CleanEx:MM_COL9A1
Genevestigator:Q05722 GermOnline:ENSMUSG00000026147 Uniprot:Q05722
Length = 921
Score = 123 (48.4 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 36/107 (33%), Positives = 57/107 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD-----EGERGMKG-- 57
GRS + G GM+G K + + + + D+GE G G+ +G RG+ G
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIV 477
Query: 58 SDEGERGMKG--SEEGERGMKGS--DEGERGTKGSD--EGERGTKGS 98
D+GE+G +G E G +G+ G+ D+G+RG G +G+RG +GS
Sbjct: 478 GDKGEKGARGFDGEPGPQGIPGAAGDQGQRGPPGETGPKGDRGIQGS 524
Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 10 EGERGMKGSDEGKYVMKGS--DKGEYVMKSS--DEGERGMKGSDEGERGMKGSDEGERGM 65
+GE+G G +EG+ +G D G+ K S + GE G++G EG RG+ G EG RG
Sbjct: 675 KGEQGASG-EEGEAGARGDLGDMGQPGPKGSVGNPGEPGLRGP-EGIRGLPGV-EGPRG- 730
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G RGM+G ++G G G +G G +D ++
Sbjct: 731 ---PPGPRGMQG-EQGATGLPGI-QGPPGRAPTDQHI 762
Score = 99 (39.9 bits), Expect = 0.00056, P = 0.00056
Identities = 37/92 (40%), Positives = 45/92 (48%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDEGERGMKGS 68
G RG+ GS G +GS G K G G+ G G GMKG D G G G
Sbjct: 619 GPRGLPGS-RGPVGPEGSP-G-IPGKLGSVGSPGLPGLPGPPGLPGMKG-DRGVFGEPGP 674
Query: 69 EEGERGMKGSDEGERGTKGS--DEGERGTKGS 98
+ GE+G G +EGE G +G D G+ G KGS
Sbjct: 675 K-GEQGASG-EEGEAGARGDLGDMGQPGPKGS 704
Score = 97 (39.2 bits), Expect = 0.00092, P = 0.00092
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 41 GERGMKGS--DEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTK 96
G +G KG + G +G KG +EG++G G E G +G G +G RG G D+GE+G +
Sbjct: 430 GHKGAKGEIGEPGRQGHKG-EEGDQGELG-EVGAQGPPGP-QGLRGITGIVGDKGEKGAR 486
Query: 97 GSD 99
G D
Sbjct: 487 GFD 489
>UNIPROTKB|E1C4H5 [details] [associations]
symbol:E1C4H5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005604 "basement membrane"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002223 Pfam:PF00014
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
SMART:SM00131 SMART:SM00327 GO:GO:0004867 Gene3D:4.10.410.10
InterPro:IPR020901 SUPFAM:SSF57362 PROSITE:PS00280
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005604
GeneTree:ENSGT00530000063022 OMA:DPNFEIF EMBL:AADN02000760
EMBL:AADN02000757 EMBL:AADN02000758 EMBL:AADN02000759
IPI:IPI00592856 Ensembl:ENSGALT00000017322 Uniprot:E1C4H5
Length = 1147
Score = 124 (48.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 41/107 (38%), Positives = 60/107 (56%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
+KG KG G++G +G + G KG + KG++ K +EG G KG ++GERG GS
Sbjct: 247 IKGDKGDPGDAGDKGERG-EPGPKGNKGDAQKGDHGEKG-EEGAPGYKG-EKGERGECGS 303
Query: 59 D--EGERGMKG--SEEGERGMKG--SDEGERGTKG--SDEGERGTKG 97
+GERG++G G RG +G G+ G KG ++GE+G G
Sbjct: 304 PGLKGERGLEGPFGPRGPRGPQGISGPPGQPGLKGIQGNKGEQGPLG 350
Score = 116 (45.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/105 (35%), Positives = 55/105 (52%)
Query: 2 KGK-GRSVHEGERGMKGS-DEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
KG G S + G++G KGS G+ + + + + D+GE+G +G +GE+G+ G
Sbjct: 517 KGDVGDSGNPGKKG-KGSLIVGRCLAEMGPSDNFPKPNGDQGEKGSRGLTGSKGEKGLAG 575
Query: 58 SDEGERGMKGSEEGERGMKGSD-EGERGTKGSDEGERGTKGSDDY 101
+GE G E G G+ GS EG G KG D+G G G D +
Sbjct: 576 P-KGEPG----ERGPPGVNGSSIEGPAGPKG-DQGPIGPPGEDGF 614
Score = 107 (42.7 bits), Expect = 0.00010, P = 0.00010
Identities = 40/105 (38%), Positives = 51/105 (48%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGS----DKGEYVMKSSDEGERGMKG-SDEGERGMKG 57
G+G +GE+G KGS G + G DKGE + G G G + G +G++G
Sbjct: 406 GEGIQGQKGEKGSKGS-VGPVGLPGQTIKGDKGEQG-QVGPRGPAGPPGFGNPGSQGIQG 463
Query: 58 SDEGERGMKGSEE-GERGMKGSDEGERGTKGSDE----GERGTKG 97
G G KGS+ G G+KG GERG KG G RG KG
Sbjct: 464 PP-GNPGAKGSKGLGLPGLKGQ-RGERGQKGEPGLPTVGLRGLKG 506
>WB|WBGene00000745 [details] [associations]
symbol:col-172 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002486
Pfam:PF01484 SMART:SM01088 InterPro:IPR008160 Pfam:PF01391
GO:GO:0042302 HOGENOM:HOG000085656 GeneTree:ENSGT00690000102605
EMBL:FO080973 PIR:T16296 RefSeq:NP_001024635.1
ProteinModelPortal:Q20142 STRING:Q20142 EnsemblMetazoa:F38B6.5a
GeneID:180934 KEGG:cel:CELE_F38B6.5 UCSC:F38B6.5a CTD:180934
WormBase:F38B6.5a eggNOG:NOG262558 InParanoid:Q20142 OMA:RVIMVAG
NextBio:911628 ArrayExpress:Q20142 Uniprot:Q20142
Length = 341
Score = 117 (46.2 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 35/101 (34%), Positives = 52/101 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EGE 62
GR G +G KG D G+ +M G G G+ G+ G+RG +G D G
Sbjct: 242 GRPGRPGPKGPKGED-GRVIMVAGPAGP-------AGPPGLPGTP-GKRGARGMDGLPGP 292
Query: 63 RGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGSDDY 101
+G G ++G+ G+ G D EG RG +G +G +G KGS ++
Sbjct: 293 QGAPG-QQGDSGLSGPDGKEGARGERGP-QGPQGLKGSCEH 331
>UNIPROTKB|B8ZZ64 [details] [associations]
symbol:MARCO "Macrophage receptor MARCO" species:9606 "Homo
sapiens" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS50287
GO:GO:0016020 InterPro:IPR008160 Pfam:PF01391 GO:GO:0005044
SUPFAM:SSF56487 HOVERGEN:HBG004933 HGNC:HGNC:6895
HOGENOM:HOG000085659 EMBL:AC013457 IPI:IPI00916165
ProteinModelPortal:B8ZZ64 SMR:B8ZZ64 STRING:B8ZZ64
Ensembl:ENST00000410021 ArrayExpress:B8ZZ64 Bgee:B8ZZ64
Uniprot:B8ZZ64
Length = 466
Score = 119 (46.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 11 GERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G G+KGS D G +G KGE S G G+KG ++G G+ G +G G G
Sbjct: 343 GATGLKGSKGDTGLQGQQGR-KGE----SGVPGPAGVKG-EQGSPGLAGP-KGAPGQAG- 394
Query: 69 EEGERGMKGSDEGERGTKGSDEGERG 94
++G++G+KGS GE+G KG ++GERG
Sbjct: 395 QKGDQGVKGSS-GEQGVKG-EKGERG 418
Score = 112 (44.5 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 10 EGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
+GE G++G GK G+ G K S +G+ G+ G +GE G KG ++G+ G+ G
Sbjct: 201 KGEAGLQGPQGAPGKQGATGTP-GPQGEKGS-KGDGGLIGP-KGETGTKG-EKGDLGLPG 256
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
S+ G+RGMKG D G G G+ +G +G G
Sbjct: 257 SK-GDRGMKG-DAGVMGPPGA-QGSKGDFG 283
Score = 104 (41.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 9 HEGERGMKGS--DEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
H G +G GS G+ + GS G +K S +G+ G++G +G +G G G G
Sbjct: 317 HPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS-KGDTGLQGQ-QGRKGESGVP-GPAG 373
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
+KG E+G G+ G +G G G +G++G KGS
Sbjct: 374 VKG-EQGSPGLAGP-KGAPGQAGQ-KGDQGVKGS 404
>GENEDB_PFALCIPARUM|PFF0595c [details] [associations]
symbol:PFF0595c "leucine-rich repeat protein 5,
LRR5" species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR025875
Pfam:PF12799 EMBL:AL844505 RefSeq:XP_966110.1
ProteinModelPortal:C6KSW6 IntAct:C6KSW6
EnsemblProtists:PFF0595c:mRNA GeneID:3885930 KEGG:pfa:PFF0595c
EuPathDB:PlasmoDB:PF3D7_0612200 Uniprot:C6KSW6
Length = 1864
Score = 126 (49.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/99 (37%), Positives = 50/99 (50%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
K K VH GE + ++ G+YV +GE K DE E G + DE E +G DEG
Sbjct: 407 KKKNNFVHNGESDDERNEAGRYV---DCEGEN--KKYDEVEEGEEYEDENEDENEGEDEG 461
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E +G +EGE +G DEGE + +E E + DD
Sbjct: 462 ED--EGEDEGED--EGEDEGEDEEEDEEEDEEEDEEEDD 496
>UNIPROTKB|C6KSW6 [details] [associations]
symbol:PFF0595c "Leucine-rich repeat protein 5, LRR5"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR001611 PROSITE:PS51450 InterPro:IPR025875
Pfam:PF12799 EMBL:AL844505 RefSeq:XP_966110.1
ProteinModelPortal:C6KSW6 IntAct:C6KSW6
EnsemblProtists:PFF0595c:mRNA GeneID:3885930 KEGG:pfa:PFF0595c
EuPathDB:PlasmoDB:PF3D7_0612200 Uniprot:C6KSW6
Length = 1864
Score = 126 (49.4 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/99 (37%), Positives = 50/99 (50%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
K K VH GE + ++ G+YV +GE K DE E G + DE E +G DEG
Sbjct: 407 KKKNNFVHNGESDDERNEAGRYV---DCEGEN--KKYDEVEEGEEYEDENEDENEGEDEG 461
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
E +G +EGE +G DEGE + +E E + DD
Sbjct: 462 ED--EGEDEGED--EGEDEGEDEEEDEEEDEEEDEEEDD 496
>WB|WBGene00022046 [details] [associations]
symbol:Y66H1A.4 species:6239 "Caenorhabditis elegans"
[GO:0030515 "snoRNA binding" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR007504 InterPro:IPR021154 Pfam:PF04410 ProDom:PD020235
GO:GO:0006898 GO:GO:0040010 GO:GO:0030515 GO:GO:0000003
GO:GO:0040002 GO:GO:0006364 GeneTree:ENSGT00530000063105
GO:GO:0009982 GO:GO:0031429 GO:GO:0031120 InterPro:IPR009000
SUPFAM:SSF50447 EMBL:FO081659 PIR:T33925 RefSeq:NP_499927.2
ProteinModelPortal:Q9TYK1 SMR:Q9TYK1 STRING:Q9TYK1 PaxDb:Q9TYK1
EnsemblMetazoa:Y66H1A.4.1 EnsemblMetazoa:Y66H1A.4.2 GeneID:176870
KEGG:cel:CELE_Y66H1A.4 UCSC:Y66H1A.4.1 CTD:176870 WormBase:Y66H1A.4
eggNOG:COG3277 InParanoid:Q9TYK1 KO:K11128 OMA:NVKIPYF
NextBio:894376 PANTHER:PTHR23237 Uniprot:Q9TYK1
Length = 244
Score = 95 (38.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/59 (45%), Positives = 33/59 (55%)
Query: 41 GERGMKGSDEGERGM--KGSDEGERGM-KGSEEGERG-MKGSDEGE-RGTKGSDEGERG 94
G+RG +GSD G RG +G G RG +G G RG +G D G RG +G D G RG
Sbjct: 162 GDRGGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGRGGFRGGDRGGFRGGRGGDFGGRG 220
Score = 36 (17.7 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 3 GKGRSVHEGERGMKGSDEG 21
G+G G RG +G D G
Sbjct: 16 GRGGGGGGGFRGGRGGDRG 34
>UNIPROTKB|Q5H9L2 [details] [associations]
symbol:TCEAL5 "Transcription elongation factor A
protein-like 5" species:9606 "Homo sapiens" [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
InterPro:IPR021156 Pfam:PF04538 EMBL:CH471190 InterPro:IPR010370
PANTHER:PTHR14754 HOGENOM:HOG000231342 HOVERGEN:HBG055896
HPA:HPA045564 eggNOG:NOG85288 OrthoDB:EOG4VQ9QH EMBL:Z68694
EMBL:BC132922 EMBL:BC132924 IPI:IPI00257932 RefSeq:NP_001012997.1
UniGene:Hs.403462 ProteinModelPortal:Q5H9L2 IntAct:Q5H9L2
PhosphoSite:Q5H9L2 DMDM:74762182 PaxDb:Q5H9L2 PRIDE:Q5H9L2
Ensembl:ENST00000372680 GeneID:340543 KEGG:hsa:340543
UCSC:uc004ejz.2 CTD:340543 GeneCards:GC0XM102528 HGNC:HGNC:22282
neXtProt:NX_Q5H9L2 PharmGKB:PA134950668 InParanoid:Q5H9L2
OMA:EDEGSTE GenomeRNAi:340543 NextBio:97916 Bgee:Q5H9L2
CleanEx:HS_TCEAL5 Genevestigator:Q5H9L2 Uniprot:Q5H9L2
Length = 206
Score = 94 (38.1 bits), Expect = 0.00019, P = 0.00019
Identities = 33/93 (35%), Positives = 48/93 (51%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS- 68
E ER ++ EGK +GS + E KS +E + M+G E E G K DEGE G +G
Sbjct: 13 ENERNLES--EGKPEDEGSTEDEG--KSDEEEKPDMEGKTECE-G-KREDEGEPGDEGQL 66
Query: 69 -EEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
+EG + +G EGE K EG+ ++ +
Sbjct: 67 EDEGNQEKQGKSEGE--DKPQSEGKPASQAKPE 97
Score = 84 (34.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/86 (33%), Positives = 41/86 (47%)
Query: 1 MKGKGRSVHEG--ERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMK 56
++ +G+ EG E K +E K M+G K E K DEGE G +G DEG + +
Sbjct: 18 LESEGKPEDEGSTEDEGKSDEEEKPDMEG--KTECEGKREDEGEPGDEGQLEDEGNQEKQ 75
Query: 57 GSDEGERGMKGSEEGERGMKGSDEGE 82
G EGE K EG+ + E +
Sbjct: 76 GKSEGED--KPQSEGKPASQAKPESQ 99
Score = 45 (20.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 81 GERGTKGSDEGERGTKGSDD 100
G+RG +G G RG K +D
Sbjct: 183 GQRGVRGVRGGGRGQKDLED 202
>UNIPROTKB|F1NNK8 [details] [associations]
symbol:COL25A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001540 "beta-amyloid binding" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0008201 "heparin
binding" evidence=IEA] GO:GO:0005615 GO:GO:0005887 GO:GO:0008201
GO:GO:0001540 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063274 OMA:KGTVGDP EMBL:AADN02008752
EMBL:AADN02008753 EMBL:AADN02008754 EMBL:AADN02008755
EMBL:AADN02008756 EMBL:AADN02008757 EMBL:AADN02008758
EMBL:AADN02008759 EMBL:AADN02008760 EMBL:AADN02008761
EMBL:AADN02008762 EMBL:AADN02008763 IPI:IPI00597189
Ensembl:ENSGALT00000017084 Uniprot:F1NNK8
Length = 503
Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 40/100 (40%), Positives = 50/100 (50%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G+ GE G+ G ++G +KG D GE K D GE G KG D GE+G GS
Sbjct: 92 GKDGQMGEPGLPGIAGEKGAAGLKG-DPGERGEKG-DAGENGPKG-DTGEKGDPGSSAA- 147
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G+KG E GE G G +GE G G G G KG ++
Sbjct: 148 -GIKG-EPGESGRPGQ-KGEPGLPGLP-GLPGIKGEPGFI 183
Score = 115 (45.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 40/103 (38%), Positives = 51/103 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDE-G 61
GR +GE G+ G G +KG + G ++ + G G+ G+ D GE G G E G
Sbjct: 157 GRPGQKGEPGLPGLP-GLPGIKG-EPG-FIGPQGEPGLPGLPGTKGDRGEAGPPGKGERG 213
Query: 62 ERGMKG-----SEEGERGMKGS--DEGERGTKGSDEGERGTKG 97
E G+ G E G RG KGS D G+RG GS G RG G
Sbjct: 214 ETGLPGPKGRTGEPGSRGPKGSKGDTGDRGDTGS-AGPRGPPG 255
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 35/96 (36%), Positives = 48/96 (50%)
Query: 4 KGRSVHEGERGMKGSDE--GKYVMKG--SDKGEY--VMKSSDEGERGMKGSDEGERGMKG 57
KG S +G+ G +G D G + G D+GE V G G+ G D G+ G+ G
Sbjct: 389 KGASGLDGKPGPRGVDGPVGPHGPAGPKGDRGEKGTVGDPGPRGPYGLPGKD-GKPGLDG 447
Query: 58 SDEGERGMKGS--EEGERGMKG--SDEGERGTKGSD 89
G RG KG E+GE+G +G ++GE G G D
Sbjct: 448 FP-GPRGEKGEIGEKGEKGFRGIKGEKGEPGQPGLD 482
Score = 94 (38.1 bits), Expect = 0.00091, P = 0.00091
Identities = 30/89 (33%), Positives = 41/89 (46%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G GMKG ++G + G+ + G G G G G+ G +G G+ G +
Sbjct: 343 GANGMKG-EKGDAGLPGAQGPSIIGPPGPPGPHGPPGP-MGPHGLPGP-KGASGLDG-KP 398
Query: 71 GERGMKG--SDEGERGTKGSDEGERGTKG 97
G RG+ G G G KG D GE+GT G
Sbjct: 399 GPRGVDGPVGPHGPAGPKG-DRGEKGTVG 426
>MGI|MGI:3648134 [details] [associations]
symbol:Col6a5 "collagen, type VI, alpha 5" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=ISO] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
MGI:MGI:3648134 GO:GO:0005576 GO:GO:0007155 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 CTD:256076 HOVERGEN:HBG107743
EMBL:AM748256 EMBL:AM748257 EMBL:AM748258 IPI:IPI00675799
RefSeq:NP_001161395.1 UniGene:Mm.39826 ProteinModelPortal:A6H584
SMR:A6H584 PRIDE:A6H584 GeneID:665033 KEGG:mmu:665033
UCSC:uc009riv.2 NextBio:426491 Genevestigator:A6H584 Uniprot:A6H584
Length = 2640
Score = 127 (49.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/110 (37%), Positives = 61/110 (55%)
Query: 1 MKG-KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGM 55
+KG G GE G+ G D EG Y +G KG+ ++G G++G+ ++GE+G
Sbjct: 1485 VKGFSGAQGEHGEDGLDGLDGEEGFYGFRGG-KGQKG-DPGNQGYPGIRGAAGEDGEKGF 1542
Query: 56 KGS--DEGE----RGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G D G+ +G KG E+GERG +G G++GT G S +G RG +G
Sbjct: 1543 PGDPGDPGKDSNIKGQKG-EKGERGRQGIT-GQKGTHGRPSSKGSRGMEG 1590
Score = 121 (47.7 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 39/109 (35%), Positives = 59/109 (54%)
Query: 4 KGRSVHEGERGMKGS--DEGKYV-MKGS--DKGEYVMKSSDEGERGMKG--SDEGERGMK 56
+G + +GE+G G D GK +KG +KGE + G++G G S +G RGM+
Sbjct: 1531 RGAAGEDGEKGFPGDPGDPGKDSNIKGQKGEKGERG-RQGITGQKGTHGRPSSKGSRGME 1589
Query: 57 GSDEGERGMKGSEEGERGMKGSD--EGERGTKGS--DEGERGTKGSDDY 101
G G +G G + G G +G+ EG +G++GS + G +G KGS Y
Sbjct: 1590 GQ-RGPQGPSG-QAGNPGPQGTQGPEGLQGSQGSSGNRGGKGDKGSQGY 1636
Score = 111 (44.1 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 38/105 (36%), Positives = 53/105 (50%)
Query: 4 KGRSVHEGERGMKGSD-----EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMK 56
KG S +G RG +G D G+ ++G D+G V G+ G+KG +GE G
Sbjct: 1441 KGSSGPKGSRGHRGEDGDPGRRGEIGLQG-DRG-VVGCPGTRGQEGVKGFSGAQGEHGED 1498
Query: 57 GSD--EGERGMKGSEEGERGMKGS--DEGERGTKGSDEGERGTKG 97
G D +GE G G G +G KG ++G G +G+ GE G KG
Sbjct: 1499 GLDGLDGEEGFYGFRGG-KGQKGDPGNQGYPGIRGA-AGEDGEKG 1541
>ZFIN|ZDB-GENE-030131-9003 [details] [associations]
symbol:scaf4a "SR-related CTD-associated factor
4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-030131-9003 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 Gene3D:1.25.40.90
InterPro:IPR008942 SUPFAM:SSF48464 InterPro:IPR006903
InterPro:IPR006569 Pfam:PF04818 SMART:SM00582 PROSITE:PS51391
GeneTree:ENSGT00530000063946 EMBL:AL837524 EMBL:AL935277
IPI:IPI00993297 Ensembl:ENSDART00000108981 Uniprot:E7F172
Length = 1104
Score = 123 (48.4 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 41/93 (44%), Positives = 50/93 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+GR E ERG G + + G D GE + D GER +G D GER +G D GER
Sbjct: 1023 RGRDGGERERGRDGGERER----GRDGGERE-RGRDGGERE-RGRDGGERE-RGRDGGER 1075
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTK 96
+G E GER +G D GER +G D GE TK
Sbjct: 1076 E-RGREGGERE-RGRDTGER-ERGRD-GEERTK 1104
Score = 120 (47.3 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 38/90 (42%), Positives = 50/90 (55%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GERG G + + G D GE + D GER +G D GER +G D GER +G +
Sbjct: 1020 DGERGRDGGERER----GRDGGERE-RGRDGGERE-RGRDGGERE-RGRDGGERE-RGRD 1071
Query: 70 EGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GER +G + GER +G D GER +G D
Sbjct: 1072 GGERE-RGREGGER-ERGRDTGER-ERGRD 1098
Score = 109 (43.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 38/100 (38%), Positives = 46/100 (46%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+G+G +G G E G ++ E + S +GERG G E ERG G
Sbjct: 980 EGRGGERPDGRERFGGWHEEPEKPGGWERERREERWRRSPDGERGRDGG-ERERGRDGG- 1037
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
E ERG G E ERG G E ERG G E ERG G +
Sbjct: 1038 ERERGRDGGER-ERGRDGG-ERERGRDGG-ERERGRDGGE 1074
>UNIPROTKB|Q9UEW3 [details] [associations]
symbol:MARCO "Macrophage receptor MARCO" species:9606 "Homo
sapiens" [GO:0005044 "scavenger receptor activity" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0004888 "transmembrane signaling
receptor activity" evidence=TAS] [GO:0005887 "integral to plasma
membrane" evidence=TAS] [GO:0007166 "cell surface receptor
signaling pathway" evidence=TAS] [GO:0008329 "pattern recognition
receptor activity" evidence=TAS] [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=TAS] InterPro:IPR001190
InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258 PROSITE:PS00420
PROSITE:PS50287 SMART:SM00202 GO:GO:0005887 GO:GO:0045087
GO:GO:0007166 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0004888 GO:GO:0008329 GO:GO:0005044 SUPFAM:SSF56487
HOVERGEN:HBG004933 EMBL:AF035819 EMBL:AF128186 EMBL:AF128172
EMBL:AF128173 EMBL:AF128174 EMBL:AF128175 EMBL:AF128176
EMBL:AF128177 EMBL:AF128178 EMBL:AF128179 EMBL:AF128180
EMBL:AF128181 EMBL:AF128182 EMBL:AF128183 EMBL:AF128184
EMBL:AF128185 EMBL:BC016004 IPI:IPI00009521 RefSeq:NP_006761.1
UniGene:Hs.67726 ProteinModelPortal:Q9UEW3 SMR:Q9UEW3 IntAct:Q9UEW3
STRING:Q9UEW3 PhosphoSite:Q9UEW3 DMDM:17380151 PaxDb:Q9UEW3
PeptideAtlas:Q9UEW3 PRIDE:Q9UEW3 DNASU:8685 Ensembl:ENST00000327097
GeneID:8685 KEGG:hsa:8685 UCSC:uc002tln.1 CTD:8685
GeneCards:GC02P119794 HGNC:HGNC:6895 MIM:604870 neXtProt:NX_Q9UEW3
PharmGKB:PA30638 eggNOG:NOG297041 HOGENOM:HOG000085659
InParanoid:Q9UEW3 KO:K13884 OMA:WVRVSHE OrthoDB:EOG4DZ1VK
PhylomeDB:Q9UEW3 GenomeRNAi:8685 NextBio:32573 ArrayExpress:Q9UEW3
Bgee:Q9UEW3 CleanEx:HS_MARCO Genevestigator:Q9UEW3
GermOnline:ENSG00000019169 Uniprot:Q9UEW3
Length = 520
Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 11 GERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G G+KGS D G +G KGE S G G+KG ++G G+ G +G G G
Sbjct: 343 GATGLKGSKGDTGLQGQQGR-KGE----SGVPGPAGVKG-EQGSPGLAGP-KGAPGQAG- 394
Query: 69 EEGERGMKGSDEGERGTKGSDEGERG 94
++G++G+KGS GE+G KG ++GERG
Sbjct: 395 QKGDQGVKGSS-GEQGVKG-EKGERG 418
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/90 (38%), Positives = 52/90 (57%)
Query: 10 EGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
+GE G++G GK G+ G K S +G+ G+ G +GE G KG ++G+ G+ G
Sbjct: 201 KGEAGLQGPQGAPGKQGATGTP-GPQGEKGS-KGDGGLIGP-KGETGTKG-EKGDLGLPG 256
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
S+ G+RGMKG D G G G+ +G +G G
Sbjct: 257 SK-GDRGMKG-DAGVMGPPGA-QGSKGDFG 283
Score = 104 (41.7 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 33/94 (35%), Positives = 50/94 (53%)
Query: 9 HEGERGMKGS--DEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
H G +G GS G+ + GS G +K S +G+ G++G +G +G G G G
Sbjct: 317 HPGAKGEPGSAGSPGRAGLPGSPGSPGATGLKGS-KGDTGLQGQ-QGRKGESGVP-GPAG 373
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
+KG E+G G+ G +G G G +G++G KGS
Sbjct: 374 VKG-EQGSPGLAGP-KGAPGQAGQ-KGDQGVKGS 404
>UNIPROTKB|P20849 [details] [associations]
symbol:COL9A1 "Collagen alpha-1(IX) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001894 "tissue homeostasis" evidence=IEA] [GO:0003417 "growth
plate cartilage development" evidence=IEA] [GO:0005594 "collagen
type IX" evidence=IDA;TAS] [GO:0009887 "organ morphogenesis"
evidence=TAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0007411
"axon guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] [GO:0030020 "extracellular matrix
structural constituent conferring tensile strength" evidence=IC]
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 GO:GO:0046872 GO:GO:0030198 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0009887
GO:GO:0005788 GO:GO:0001894 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025 GO:GO:0002062
HOVERGEN:HBG004933 GO:GO:0030020 SMART:SM00210 OrthoDB:EOG4P2Q36
EMBL:X54412 EMBL:X54413 EMBL:AF036130 EMBL:AF036110 EMBL:AF036111
EMBL:AF036112 EMBL:AF036113 EMBL:AF036114 EMBL:AF036115
EMBL:AF036116 EMBL:AF036117 EMBL:AF036118 EMBL:AF036119
EMBL:AF036120 EMBL:AF036121 EMBL:AF036122 EMBL:AF036123
EMBL:AF036124 EMBL:AF036125 EMBL:AF036126 EMBL:AF036127
EMBL:AF036128 EMBL:AF036129 EMBL:AL080275 EMBL:AL160262
EMBL:BC015409 EMBL:BC063646 EMBL:M32137 EMBL:M32133 EMBL:M32135
IPI:IPI00295999 IPI:IPI00645204 IPI:IPI00874229 PIR:S13580
PIR:S13581 RefSeq:NP_001842.3 RefSeq:NP_511040.2 UniGene:Hs.590892
PDB:2UUR PDBsum:2UUR ProteinModelPortal:P20849 SMR:P20849
STRING:P20849 PhosphoSite:P20849 DMDM:296439373 PaxDb:P20849
PRIDE:P20849 DNASU:1297 Ensembl:ENST00000320755
Ensembl:ENST00000357250 Ensembl:ENST00000370496 GeneID:1297
KEGG:hsa:1297 UCSC:uc003pff.4 UCSC:uc003pfg.4 CTD:1297
GeneCards:GC06M070924 HGNC:HGNC:2217 MIM:120210 MIM:614134
MIM:614135 neXtProt:NX_P20849 Orphanet:250984 Orphanet:166002
PharmGKB:PA26733 InParanoid:P20849 KO:K08131 OMA:GFCEPAS
PhylomeDB:P20849 ChiTaRS:COL9A1 EvolutionaryTrace:P20849
GenomeRNAi:1297 NextBio:5265 ArrayExpress:P20849 Bgee:P20849
Genevestigator:P20849 GermOnline:ENSG00000112280 GO:GO:0005594
GO:GO:0003417 Uniprot:P20849
Length = 921
Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 35/107 (32%), Positives = 57/107 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD-----EGERGMKG-- 57
GRS + G GM+G K + + + + D+GE G G+ +G RG+ G
Sbjct: 418 GRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGAQGLRGITGIV 477
Query: 58 SDEGERGMKG--SEEGERGMKGS--DEGERGTKGS--DEGERGTKGS 98
D+GE+G +G E G +G+ G+ D+G+RG G +G+RG +G+
Sbjct: 478 GDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGPKGDRGAEGA 524
Score = 100 (40.3 bits), Expect = 0.00044, P = 0.00044
Identities = 32/96 (33%), Positives = 48/96 (50%)
Query: 11 GERGMKGSDEGKYVMKGS---DKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEGERGM 65
G RG G +G + + + Y G +G KG + G +G KG +EG++G
Sbjct: 397 GPRGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKG-EEGDQGE 455
Query: 66 KGSEEGERGMKGSDEGERGTKG--SDEGERGTKGSD 99
G E G +G G+ +G RG G D+GE+G +G D
Sbjct: 456 LG-EVGAQGPPGA-QGLRGITGIVGDKGEKGARGLD 489
Score = 99 (39.9 bits), Expect = 0.00056, P = 0.00056
Identities = 36/102 (35%), Positives = 53/102 (51%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG+ G S EGE G +G + G + G KG + + GE G++G EG RG+ G E
Sbjct: 675 KGEQGASGEEGEAGERG-ELGDIGLPGP-KGS----AGNPGEPGLRGP-EGSRGLPGV-E 726
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G RG G RG++G ++G G G +G G +D ++
Sbjct: 727 GPRG----PPGPRGVQG-EQGATGLPGV-QGPPGRAPTDQHI 762
>UNIPROTKB|F1RTT3 [details] [associations]
symbol:COL9A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005594 "collagen type IX" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001894
"tissue homeostasis" evidence=IEA] Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001894
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210
SMART:SM00210 CTD:1297 KO:K08131 OMA:GFCEPAS GO:GO:0005594
GO:GO:0003417 GeneTree:ENSGT00700000104194 EMBL:FP016097
RefSeq:XP_003121321.2 Ensembl:ENSSSCT00000004723 GeneID:100155319
KEGG:ssc:100155319 ArrayExpress:F1RTT3 Uniprot:F1RTT3
Length = 922
Score = 122 (48.0 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 41/93 (44%), Positives = 51/93 (54%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGS--DEGERGMK 66
G GMKG D G V + KGE + S +EGE G +G D G G KGS + GE G++
Sbjct: 658 GLPGMKG-DRG-VVGEPGPKGEQGV-SGEEGEAGERGELGDIGLPGPKGSVGNPGEPGLR 714
Query: 67 GSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G E G RG+ G EG RG G +GE+G G
Sbjct: 715 GPE-GSRGLPGV-EGPRGPPGPRGVQGEQGATG 745
Score = 121 (47.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGS--DKGE--YVMKSSDEGERGMKGSDEGERGMKGSDE 60
G H+G +G G + G+ KG D+GE V G +G++G G G KG ++
Sbjct: 427 GMRGHKGAKGEVG-EPGRQGHKGEEGDQGEPGEVGAQGPPGAQGLRGIT-GIAGAKG-EK 483
Query: 61 GERGMKGSEEGERGMKGS--DEGERGTKGS--DEGERGTKGS 98
G RG+ G E G +G+ G+ D+G+RG G +G+RG +GS
Sbjct: 484 GARGLDG-EPGPQGLPGAPGDQGQRGPPGEIGPKGDRGAQGS 524
Score = 98 (39.6 bits), Expect = 0.00072, P = 0.00072
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 10 EGERGMKGSDEGKYVMKGS--DKGEYVMKSS--DEGERGMKGSDEGERGMKGSDEGERGM 65
+GE+G+ G +EG+ +G D G K S + GE G++G EG RG+ G EG RG
Sbjct: 675 KGEQGVSG-EEGEAGERGELGDIGLPGPKGSVGNPGEPGLRGP-EGSRGLPGV-EGPRG- 730
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G RG++G ++G G G EG G +D ++
Sbjct: 731 ---PPGPRGVQG-EQGATGLPGI-EGPPGRAPTDQHI 762
>UNIPROTKB|G3MZ22 [details] [associations]
symbol:G3MZ22 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0042461 "photoreceptor cell development" evidence=IEA]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0032391
"photoreceptor connecting cilium" evidence=IEA] [GO:0001750
"photoreceptor outer segment" evidence=IEA] [GO:0035556
"intracellular signal transduction" evidence=IEA]
InterPro:IPR003533 Pfam:PF03607 PROSITE:PS50309 GO:GO:0035556
GO:GO:0045494 GO:GO:0032391 GO:GO:0042461 GO:GO:0035085
GO:GO:0001750 Gene3D:3.10.20.230 SUPFAM:SSF89837
GeneTree:ENSGT00530000063898 OMA:CPCEACV EMBL:DAAA02021941
EMBL:DAAA02021942 Ensembl:ENSBTAT00000064867 Uniprot:G3MZ22
Length = 2179
Score = 126 (49.4 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/86 (34%), Positives = 36/86 (41%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G E + +GE EGE G+ EGE G E E G +
Sbjct: 2078 EGEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGLAPEQEGEEGPAPEQETEEGPAPEQ 2137
Query: 70 EGERGMKGSDEGERGTKGSDEGERGT 95
EGE G+ EGE G EGE G+
Sbjct: 2138 EGEEGLASEQEGEEGLAPEHEGEEGS 2163
Score = 124 (48.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 31/85 (36%), Positives = 34/85 (40%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ + E EGE G EGE G EGE G +
Sbjct: 1958 EGEEGPAPEQEGEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQ 2017
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G EGE G EGE G
Sbjct: 2018 EGEEGPAPEQEGEEGPAPEQEGEEG 2042
Score = 124 (48.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/86 (33%), Positives = 37/86 (43%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
E E G EG+ +GE + EGE G E E G EGE G+ +
Sbjct: 2088 ETEEGPAPEQEGEEGPAPEQEGEEGLAPEQEGEEGPAPEQETEEGPAPEQEGEEGLASEQ 2147
Query: 70 EGERGMKGSDEGERGTKGSDEGERGT 95
EGE G+ EGE G+ E E G+
Sbjct: 2148 EGEEGLAPEHEGEEGSAPEQETEEGS 2173
Score = 122 (48.0 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 30/85 (35%), Positives = 34/85 (40%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ + E EGE G EGE G+ EGE G +
Sbjct: 2068 EGEEGPAPEQEGEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGLAPEQEGEEGPAPEQ 2127
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
E E G EGE G EGE G
Sbjct: 2128 ETEEGPAPEQEGEEGLASEQEGEEG 2152
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/85 (35%), Positives = 33/85 (38%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ +GE EGE G EGE G E E G +
Sbjct: 1998 EGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQ 2057
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
E E G EGE G EGE G
Sbjct: 2058 ETEEGPAPEQEGEEGPAPEQEGEEG 2082
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/85 (35%), Positives = 33/85 (38%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ +GE EGE G EGE G EGE G +
Sbjct: 1988 EGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQ 2047
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
E E G E E G EGE G
Sbjct: 2048 ETEEGPAPEQETEEGPAPEQEGEEG 2072
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/85 (35%), Positives = 33/85 (38%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G E + +GE EGE G EGE G EGE G +
Sbjct: 1968 EGEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQ 2027
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G EGE G E E G
Sbjct: 2028 EGEEGPAPEQEGEEGPAPEQETEEG 2052
Score = 116 (45.9 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 30/85 (35%), Positives = 33/85 (38%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
E E G EG+ +GE E E G EGE G EGE G +
Sbjct: 1948 ETEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQ 2007
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G EGE G EGE G
Sbjct: 2008 EGEEGPAPEQEGEEGPAPEQEGEEG 2032
Score = 112 (44.5 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 29/85 (34%), Positives = 33/85 (38%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
E E G EG+ +GE E E G EGE G EGE G+ +
Sbjct: 2058 ETEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGLAPEQ 2117
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G E E G EGE G
Sbjct: 2118 EGEEGPAPEQETEEGPAPEQEGEEG 2142
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/85 (34%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G E + + E EGE G EGE G E E G +
Sbjct: 2038 EGEEGPAPEQETEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQ 2097
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G EGE G EGE G
Sbjct: 2098 EGEEGPAPEQEGEEGLAPEQEGEEG 2122
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/85 (34%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ + E E E G EGE G EGE G +
Sbjct: 2028 EGEEGPAPEQEGEEGPAPEQETEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQ 2087
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
E E G EGE G EGE G
Sbjct: 2088 ETEEGPAPEQEGEEGPAPEQEGEEG 2112
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/85 (34%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ +GE E E G E E G EGE G +
Sbjct: 2018 EGEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQETEEGPAPEQEGEEGPAPEQ 2077
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G E E G EGE G
Sbjct: 2078 EGEEGPAPEQETEEGPAPEQEGEEG 2102
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/85 (34%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
EGE G EG+ +GE EGE G E E G E E G +
Sbjct: 2008 EGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQETEEGPAPEQ 2067
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G EGE G E E G
Sbjct: 2068 EGEEGPAPEQEGEEGPAPEQETEEG 2092
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/85 (34%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
E E G EG+ +GE EGE G EGE G EGE G +
Sbjct: 1978 ETEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQEGEEGPAPEQ 2037
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G E E G E E G
Sbjct: 2038 EGEEGPAPEQETEEGPAPEQETEEG 2062
Score = 108 (43.1 bits), Expect = 0.00016, P = 0.00016
Identities = 29/85 (34%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
E E G E + +GE EGE G E E G EGE G +
Sbjct: 1938 ETEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQEGEEGPAPEQ 1997
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G EGE G EGE G
Sbjct: 1998 EGEEGPAPEQEGEEGPAPEQEGEEG 2022
Score = 107 (42.7 bits), Expect = 0.00021, P = 0.00021
Identities = 28/89 (31%), Positives = 37/89 (41%)
Query: 6 RSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGM 65
+ EG + ++EG + +++G EGE G EGE G E E G
Sbjct: 1927 QETEEGPAPEQETEEGPAPEQETEEGP---APEQEGEEGPAPEQEGEEGPAPEQETEEGP 1983
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERG 94
+EGE G EGE G EGE G
Sbjct: 1984 APEQEGEEGPAPEQEGEEGPAPEQEGEEG 2012
Score = 104 (41.7 bits), Expect = 0.00043, P = 0.00043
Identities = 28/85 (32%), Positives = 32/85 (37%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
E E G E + +GE EGE G E E G EGE G +
Sbjct: 2048 ETEEGPAPEQETEEGPAPEQEGEEGPAPEQEGEEGPAPEQETEEGPAPEQEGEEGPAPEQ 2107
Query: 70 EGERGMKGSDEGERGTKGSDEGERG 94
EGE G+ EGE G E E G
Sbjct: 2108 EGEEGLAPEQEGEEGPAPEQETEEG 2132
>UNIPROTKB|Q9BXS0 [details] [associations]
symbol:COL25A1 "Collagen alpha-1(XXV) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0001540
"beta-amyloid binding" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0005615 "extracellular space"
evidence=IDA] [GO:0008201 "heparin binding" evidence=IDA]
[GO:0005576 "extracellular region" evidence=IDA] [GO:0005887
"integral to plasma membrane" evidence=IDA] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0005886 "plasma
membrane" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] Reactome:REACT_118779 GO:GO:0005615
GO:GO:0005887 GO:GO:0030198 GO:GO:0008201 GO:GO:0005788
GO:GO:0001540 HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 EMBL:AC097473 EMBL:AF293340
EMBL:AF293341 EMBL:AC073427 EMBL:AC095066 EMBL:AC004701
EMBL:AC004051 IPI:IPI00186946 IPI:IPI00942774 IPI:IPI00953070
RefSeq:NP_115907.2 RefSeq:NP_942014.1 UniGene:Hs.658842
ProteinModelPortal:Q9BXS0 STRING:Q9BXS0 PhosphoSite:Q9BXS0
DMDM:296434459 PaxDb:Q9BXS0 PRIDE:Q9BXS0 Ensembl:ENST00000399126
Ensembl:ENST00000399132 GeneID:84570 KEGG:hsa:84570 UCSC:uc003hze.1
UCSC:uc003hzg.3 CTD:84570 GeneCards:GC04M109731 H-InvDB:HIX0004434
HGNC:HGNC:18603 HPA:HPA029107 MIM:610004 neXtProt:NX_Q9BXS0
PharmGKB:PA134912284 HOVERGEN:HBG101380 OrthoDB:EOG4K3KWH
GenomeRNAi:84570 NextBio:74464 ArrayExpress:Q9BXS0 Bgee:Q9BXS0
CleanEx:HS_COL25A1 Genevestigator:Q9BXS0 Uniprot:Q9BXS0
Length = 654
Score = 120 (47.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 37/94 (39%), Positives = 53/94 (56%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD-EGER 63
GR +GE G+ G G +KG + G ++ + G G+ G+ +GERG G GER
Sbjct: 320 GRPGQKGEPGLPGLP-GLPGIKG-EPG-FIGPQGEPGLPGLPGT-KGERGEAGPPGRGER 375
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G+ G +G +G + G RG KGS +G+RG KG
Sbjct: 376 GEPGAP-GPKGKQG-ESGTRGPKGS-KGDRGEKG 406
Score = 108 (43.1 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 38/100 (38%), Positives = 50/100 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G + +GE G+ G+ G+ + G + GE K D GE G KG D GE+G GS
Sbjct: 255 GMNGQKGEPGLPGA-VGQNGIPGPKGEPGEQGEKG-DAGENGPKG-DTGEKGDPGSSAA- 310
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G+KG E GE G G +GE G G G G KG ++
Sbjct: 311 -GIKG-EPGESGRPGQ-KGEPGLPGLP-GLPGIKGEPGFI 346
Score = 103 (41.3 bits), Expect = 0.00014, P = 0.00014
Identities = 33/80 (41%), Positives = 45/80 (56%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GERG KG+ + + +G Y + D GE G+ G G RG KG D GE+G E
Sbjct: 567 KGERGEKGA-----MGEPGPRGPYGLPGKD-GEPGLDGFP-GPRGEKG-DLGEKG----E 614
Query: 70 EGERGMKGSDEGERGTKGSD 89
+G RG+KG ++GE G G D
Sbjct: 615 KGFRGVKG-EKGEPGQPGLD 633
Score = 102 (41.0 bits), Expect = 0.00018, P = 0.00018
Identities = 35/100 (35%), Positives = 46/100 (46%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EG 61
+G GE G KG D G+ GS + + G G KG + G G+ G +G
Sbjct: 284 QGEKGDAGENGPKG-DTGEKGDPGSSAAGIKGEPGESGRPGQKG-EPGLPGLPGLPGIKG 341
Query: 62 ERGMKGSEEGERGMKG--SDEGERGTKGSD-EGERGTKGS 98
E G G + GE G+ G +GERG G GERG G+
Sbjct: 342 EPGFIGPQ-GEPGLPGLPGTKGERGEAGPPGRGERGEPGA 380
Score = 96 (38.9 bits), Expect = 0.00078, P = 0.00078
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 41 GERGMKGSDEGERGMKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G KG + GE+G G + G RG G ++GE G+ G G RG KG D GE+G KG
Sbjct: 562 GPAGPKG-ERGEKGAMG-EPGPRGPYGLPGKDGEPGLDGFP-GPRGEKG-DLGEKGEKG 616
>UNIPROTKB|F1NFE0 [details] [associations]
symbol:COL6A1 "Collagen alpha-1(VI) chain" species:9031
"Gallus gallus" [GO:0005576 "extracellular region" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 GO:GO:0005576 GO:GO:0043234
GO:GO:0042383 GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 GO:GO:0071230 IPI:IPI00822166 OMA:VKENYAE
GeneTree:ENSGT00530000063022 EMBL:AADN02034405 EMBL:AADN02034406
EMBL:AADN02034407 EMBL:AADN02034408 EMBL:AADN02034409
EMBL:AADN02034410 Ensembl:ENSGALT00000039669 ArrayExpress:F1NFE0
Uniprot:F1NFE0
Length = 1020
Score = 122 (48.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 45/106 (42%), Positives = 56/106 (52%)
Query: 1 MKG-KGRSVHE-GERGMKGS--DEGKYVMKGSD--KGE--YVMKSSDEGERGMKGSDEGE 52
MKG KGRS E G RG KG+ ++GK + G D KGE Y +G G G+ +G
Sbjct: 298 MKGDKGRSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGT-QGP 356
Query: 53 RGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G KG D G G KG + GE G G G +G GS GE+G G+
Sbjct: 357 PGPKG-DPGAYGPKGGK-GEPGEDGKP-GRQGIPGSP-GEKGAPGN 398
Score = 117 (46.2 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 41/96 (42%), Positives = 51/96 (53%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGE---RGMKGSDEGERGMKGSDEGERGM 65
HEGERG G G+ KG D G+ + D G +GMKG RG KGS G +G
Sbjct: 265 HEGERGKPGLP-GQ---KG-DAGD-PGRPGDMGPVGYQGMKGDKGRSRGEKGS-RGAKGA 317
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
KG E+G+RG+ G D G +G G G G KGS +
Sbjct: 318 KG-EKGKRGIDGID-GMKGEAGYP-GLPGCKGSPGF 350
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 38/97 (39%), Positives = 52/97 (53%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
GKG +G+ G +G G KG+ ++GE + G+ G G+D G G +GS+
Sbjct: 371 GKGEPGEDGKPGRQGIP-GSPGEKGAPGNRGE-PGPLGETGDEGSPGAD-GPPGERGSN- 426
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GERG GS G+RG +G D GE G G D+G G G
Sbjct: 427 GERGPPGSP-GDRGPRG-DLGEPGPPG-DQGREGPLG 460
>UNIPROTKB|E1BI98 [details] [associations]
symbol:COL6A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 GO:GO:0005576 GO:GO:0043234 GO:GO:0042383
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GO:GO:0071230 CTD:1291 KO:K06238 OMA:VKENYAE
GeneTree:ENSGT00530000063022 EMBL:DAAA02003502 IPI:IPI00713573
RefSeq:NP_001137337.1 UniGene:Bt.23508 PRIDE:E1BI98
Ensembl:ENSBTAT00000015668 GeneID:511422 KEGG:bta:511422
NextBio:20869920 Uniprot:E1BI98
Length = 1027
Score = 122 (48.0 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 40/98 (40%), Positives = 52/98 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G +EGERG G K + D G G +GMKG ++G RG KGS G +
Sbjct: 262 RGDPGYEGERGKPGLPGEKG--EAGDPGR-PGDLGPVGYQGMKG-EKGSRGEKGS-RGPK 316
Query: 64 GMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
G KG E+G+RGM G D +GE G G G +G+ G D
Sbjct: 317 GYKG-EKGKRGMDGVDGMKGETGFPGLP-GCKGSPGFD 352
Score = 120 (47.3 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 46/117 (39%), Positives = 58/117 (49%)
Query: 1 MKG-KGRSVHEGERGMKG--SDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGER 53
MKG KG +G RG KG ++GK M G D KGE G +G G D +G
Sbjct: 300 MKGEKGSRGEKGSRGPKGYKGEKGKRGMDGVDGMKGETGFPGLP-GCKGSPGFDGIQGPP 358
Query: 54 GMKGSDEGERGMKGSE-----EGERGMKGS-----DEGERGTKG--SDEGERGTKGS 98
G KG D G G+KG + +GE G GS DEGE G G ++GE G +G+
Sbjct: 359 GPKG-DPGAFGLKGQKGEPGADGEPGRPGSTGPPGDEGEPGEPGPPGEKGEAGDEGN 414
>MGI|MGI:88460 [details] [associations]
symbol:Col6a2 "collagen, type VI, alpha 2" species:10090 "Mus
musculus" [GO:0005576 "extracellular region" evidence=ISO]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031012 "extracellular
matrix" evidence=IDA] [GO:0042383 "sarcolemma" evidence=IDA]
[GO:0043234 "protein complex" evidence=ISO] [GO:0070208 "protein
heterotrimerization" evidence=ISO] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 MGI:MGI:88460 GO:GO:0005576
GO:GO:0005615 GO:GO:0043234 GO:GO:0009749 GO:GO:0007155
GO:GO:0042383 GO:GO:0005581 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 eggNOG:NOG256042 HOGENOM:HOG000111863
KO:K06238 GeneTree:ENSGT00530000063022 CTD:1292 HOVERGEN:HBG051051
OrthoDB:EOG45TCMN ChiTaRS:COL6A2 EMBL:X65582 EMBL:BC034414
EMBL:AK042826 EMBL:X62332 EMBL:L06343 EMBL:Z18272 IPI:IPI00621027
PIR:S21369 PIR:S32604 RefSeq:NP_666119.1 UniGene:Mm.1949
ProteinModelPortal:Q02788 SMR:Q02788 STRING:Q02788
PhosphoSite:Q02788 REPRODUCTION-2DPAGE:Q02788 PaxDb:Q02788
PRIDE:Q02788 Ensembl:ENSMUST00000001181 GeneID:12834 KEGG:mmu:12834
UCSC:uc007fuu.2 InParanoid:Q02788 NextBio:282346 Bgee:Q02788
CleanEx:MM_COL6A2 Genevestigator:Q02788
GermOnline:ENSMUSG00000020241 Uniprot:Q02788
Length = 1034
Score = 122 (48.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 40/101 (39%), Positives = 53/101 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
G G +GE G +G D G GSD KGE EG RG+ G + G +G KG
Sbjct: 428 GPGPRGPKGEPGRRG-DPGTKGGPGSDGPKGEKG-DPGPEGPRGLAG-EVGSKGAKGDRG 484
Query: 60 -EGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKG 97
G RG +G+ E G++G +G D G+ G +G D G+ G KG
Sbjct: 485 LPGPRGPQGALGEPGKQGSRG-DPGDAGPRG-DSGQPGPKG 523
Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 37/100 (37%), Positives = 48/100 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKGSDEGERGMKGSDEG 61
+G + GE G G + G KG D G + D G++G KG +G G GS G
Sbjct: 366 RGPDGYPGEAGSPG-ERGDQGAKG-DSGRPGRRGPPGDPGDKGSKGY-QGNNGAPGSP-G 421
Query: 62 ERGMKGSEEGERGMKGSD--EGERGTKGS--DEGERGTKG 97
+G KG G RG KG G+ GTKG +G +G KG
Sbjct: 422 VKGGKGGP-GPRGPKGEPGRRGDPGTKGGPGSDGPKGEKG 460
Score = 112 (44.5 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 38/99 (38%), Positives = 50/99 (50%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVM-KSSDEGERGMKGSDEGERGMKGSDE 60
KG +GE+G GSD +G + G + + K G G KG D G RG G
Sbjct: 315 KGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKG-DPGSRGPDGYP- 372
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
GE G G E G++G KG D G G +G D G++G+KG
Sbjct: 373 GEAGSPG-ERGDQGAKG-DSGRPGRRGPPGDPGDKGSKG 409
Score = 109 (43.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 36/94 (38%), Positives = 48/94 (51%)
Query: 10 EGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKG--SDEGERGMKGSDEGERGM 65
+G+ G +G D G GS ++G+ K D G G +G D G++G KG +G G
Sbjct: 360 KGDPGSRGPD-GYPGEAGSPGERGDQGAKG-DSGRPGRRGPPGDPGDKGSKGY-QGNNGA 416
Query: 66 KGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
GS G +G KG G RG KG G+ GTKG
Sbjct: 417 PGSP-GVKGGKGGP-GPRGPKGEPGRRGDPGTKG 448
>UNIPROTKB|Q5JSK9 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 SMART:SM00527 GO:GO:0005730 GO:GO:0000785
GO:GO:0031492 EMBL:AL391294 UniGene:Hs.282204 HGNC:HGNC:8013
HOGENOM:HOG000113856 ChiTaRS:HMGN5 EMBL:AL357115 EMBL:AL590810
IPI:IPI00642320 STRING:Q5JSK9 Ensembl:ENST00000447319
Uniprot:Q5JSK9
Length = 201
Score = 110 (43.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/82 (32%), Positives = 45/82 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGM-KGSDEGE 62
KG + E ++ KG ++GK G++KGE K ++G++G G GE G KG DE E
Sbjct: 121 KGEAGKE-DKDEKGEEDGKEDKNGNEKGEDA-KEKEDGKKGEDGKGNGEDGKEKGEDEKE 178
Query: 63 R-GMKGSEEGERGMKGSDEGER 83
K + +G+ G ++G++
Sbjct: 179 EEDRKETGDGKENEDGKEKGDK 200
Score = 99 (39.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 16 KGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG-SDEGERGMKGSDEGERGMKGSEEGERG 74
KG ++ + V E K +E + KG + + ++ KG ++G+ G+E+GE
Sbjct: 91 KGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDA 150
Query: 75 MKGSDEGERGTKGSDEGERGT-KGSDD 100
K ++G++G G GE G KG D+
Sbjct: 151 -KEKEDGKKGEDGKGNGEDGKEKGEDE 176
Score = 95 (38.5 bits), Expect = 0.00014, P = 0.00014
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 26 KGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGT 85
+ +KGE + DE KG ++G+ G+++GE K E+G++G G GE G
Sbjct: 117 QNEEKGEAGKEDKDE-----KGEEDGKEDKNGNEKGEDA-KEKEDGKKGEDGKGNGEDGK 170
Query: 86 -KGSDEGE 92
KG DE E
Sbjct: 171 EKGEDEKE 178
>UNIPROTKB|E1BU12 [details] [associations]
symbol:COL21A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0031012 "extracellular matrix" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
InterPro:IPR001791 SMART:SM00210 GeneTree:ENSGT00700000104243
OMA:NGRQGIP EMBL:AADN02002705 EMBL:AADN02002706 IPI:IPI00588120
Ensembl:ENSGALT00000026273 Uniprot:E1BU12
Length = 959
Score = 121 (47.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 40/104 (38%), Positives = 62/104 (59%)
Query: 1 MKGK-GRSVHEGERGMKGS--DEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGM 55
++GK G S +GE G G+ + G + G+ KG+ K S +GE G++G +GE+G
Sbjct: 665 LQGKPGSSGAKGEPGGPGAPGEPGYPGIPGTQGIKGD---KGS-QGESGIQGR-KGEKGR 719
Query: 56 KGSD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G+ +G G++G E+GE+G KG D G RG G +GE G +G
Sbjct: 720 QGNPGLQGTEGLRG-EQGEKGEKG-DPGIRGINGQ-KGESGIQG 760
>UNIPROTKB|F1LNH3 [details] [associations]
symbol:Col6a2 "Protein Col6a2" species:10116 "Rattus
norvegicus" [GO:0005615 "extracellular space" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 RGD:1305585 GO:GO:0005615 GO:GO:0043234 GO:GO:0042383
GO:GO:0070208 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GeneTree:ENSGT00530000063022 OMA:RALCNHD IPI:IPI00372839
Ensembl:ENSRNOT00000001695 ArrayExpress:F1LNH3 Uniprot:F1LNH3
Length = 1025
Score = 121 (47.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 40/101 (39%), Positives = 53/101 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
G G +GE G +G D G GSD KGE EG RG+ G + G +G KG
Sbjct: 419 GPGPRGPKGEPGRRG-DPGTKGGPGSDGPKGEKG-DPGPEGPRGLAG-EIGSKGAKGDRG 475
Query: 60 -EGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKG 97
G RG +G+ E G++G +G D G+ G +G D G+ G KG
Sbjct: 476 LPGPRGPQGALGEPGKQGSRG-DPGDAGPRG-DSGQPGPKG 514
Score = 110 (43.8 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 39/101 (38%), Positives = 49/101 (48%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVM-KSSDEGERGMKGSDEGERGMKGSDE 60
KG +GE+G GSD +G + G + + K G G KG D G RG G
Sbjct: 306 KGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKG-DPGSRGPDGYP- 363
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
GE G G E+G++G KG D G G +G G G KGS Y
Sbjct: 364 GEAGSPG-EQGDQGAKG-DSGRPGRRGPP-GNPGDKGSKGY 401
Score = 108 (43.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 37/100 (37%), Positives = 49/100 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + GE G G ++G KG D G + G G KGS +G RG G+ G
Sbjct: 357 RGPDGYPGEAGSPG-EQGDQGAKG-DSGR-PGRRGPPGNPGDKGS-KGYRGNSGAP-GSP 411
Query: 64 GMKGSE--EGERGMKGSD--EGERGTKGS--DEGERGTKG 97
G+KG + G RG KG G+ GTKG +G +G KG
Sbjct: 412 GVKGGKGGPGPRGPKGEPGRRGDPGTKGGPGSDGPKGEKG 451
>UNIPROTKB|P12109 [details] [associations]
symbol:COL6A1 "Collagen alpha-1(VI) chain" species:9606
"Homo sapiens" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0071230
"cellular response to amino acid stimulus" evidence=IEA]
[GO:0005589 "collagen type VI" evidence=NAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0005576 "extracellular region"
evidence=IDA;TAS] [GO:0043234 "protein complex" evidence=IPI]
[GO:0048407 "platelet-derived growth factor binding" evidence=IDA]
[GO:0070208 "protein heterotrimerization" evidence=IPI] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030133 "transport vesicle"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0031012 "extracellular matrix" evidence=ISS;IDA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0007411 GO:GO:0043234 GO:GO:0030198 GO:GO:0007155
GO:GO:0042383 GO:GO:0005788 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0030133 GO:GO:0071230 DrugBank:DB00039
GO:GO:0048407 CTD:1291 eggNOG:NOG256042 HOVERGEN:HBG095954
KO:K06238 OrthoDB:EOG4WWRHX EMBL:X15879 EMBL:X15880 EMBL:BC005159
EMBL:BC052575 EMBL:X99109 EMBL:X99135 EMBL:X99136 EMBL:M20776
EMBL:S75420 EMBL:S75385 EMBL:S75388 EMBL:S75390 EMBL:S75392
EMBL:S75394 EMBL:S75396 EMBL:S75398 EMBL:S75400 EMBL:S75402
EMBL:S75404 EMBL:S75406 EMBL:S75408 EMBL:S75410 EMBL:S75412
EMBL:S75414 EMBL:S75416 EMBL:S75418 EMBL:X06194 EMBL:M27447
IPI:IPI00291136 PIR:S05377 RefSeq:NP_001839.2 UniGene:Hs.474053
ProteinModelPortal:P12109 SMR:P12109 IntAct:P12109 STRING:P12109
PhosphoSite:P12109 DMDM:125987811 REPRODUCTION-2DPAGE:IPI00291136
REPRODUCTION-2DPAGE:P12109 PaxDb:P12109 PeptideAtlas:P12109
PRIDE:P12109 Ensembl:ENST00000361866 GeneID:1291 KEGG:hsa:1291
UCSC:uc002zhu.1 GeneCards:GC21P047401 HGNC:HGNC:2211 HPA:HPA019142
HPA:HPA029401 MIM:120220 MIM:158810 MIM:254090 neXtProt:NX_P12109
Orphanet:610 Orphanet:75840 PharmGKB:PA26727 InParanoid:P12109
OMA:VKENYAE PhylomeDB:P12109 ChiTaRS:COL6A1 GenomeRNAi:1291
NextBio:5227 PMAP-CutDB:P12109 ArrayExpress:P12109 Bgee:P12109
CleanEx:HS_COL6A1 Genevestigator:P12109 GermOnline:ENSG00000142156
GO:GO:0005589 Uniprot:P12109
Length = 1028
Score = 121 (47.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 43/106 (40%), Positives = 54/106 (50%)
Query: 1 MKG-KGRSVHEGERGMKG--SDEGKYVMKGSD--KGE--YVMKSSDEGERGMKGSDEGER 53
MKG KG +G RG KG ++GK + G D KGE Y +G G G +G
Sbjct: 300 MKGEKGSRGEKGSRGPKGYKGEKGKRGIDGVDGVKGEMGYPGLPGCKGSPGFDGI-QGPP 358
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G KG D G G+KG E+GE G G + G G+ G DEG+ G G
Sbjct: 359 GPKG-DPGAFGLKG-EKGEPGADG-EAGRPGSSGPSGDEGQPGEPG 401
Score = 109 (43.4 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 38/104 (36%), Positives = 54/104 (51%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKG--SDKGE--YVMKSSDEGERGMKGSDEGERGMKG 57
+G EGERG G ++G+ G D G Y ++G RG KGS G +G KG
Sbjct: 262 RGDPGFEGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKGEKGSRGEKGS-RGPKGYKG 320
Query: 58 SDEGERGMKGSE--EGERGMKGSDEGERGTKGSD--EGERGTKG 97
++G+RG+ G + +GE G G G +G+ G D +G G KG
Sbjct: 321 -EKGKRGIDGVDGVKGEMGYPGLP-GCKGSPGFDGIQGPPGPKG 362
Score = 108 (43.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 32/67 (47%), Positives = 40/67 (59%)
Query: 40 EGERGMKG--SDEGERGMKG--SDEGE---RGMKGSEEGERGMKGSDEGERGTKGSDEGE 92
EGERG G ++GE G G D G +GMKG E+G RG KGS G +G KG ++G+
Sbjct: 268 EGERGKPGLPGEKGEAGDPGRPGDLGPVGYQGMKG-EKGSRGEKGS-RGPKGYKG-EKGK 324
Query: 93 RGTKGSD 99
RG G D
Sbjct: 325 RGIDGVD 331
Score = 98 (39.6 bits), Expect = 0.00082, P = 0.00082
Identities = 36/105 (34%), Positives = 49/105 (46%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSD-EGERGMKG--SD 59
G + G+ G GS EG G G+ + + GE G G+ EG G G +
Sbjct: 473 GPKGYRGDEGPPGS-EGARGAPGPAGPPGDPGLMG-ERGEDGPAGNGTEGFPGFPGYPGN 530
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGE---RGTKGSDDY 101
G G+ G++ G G+KG DEGE G G D + RG KG+ Y
Sbjct: 531 RGAPGINGTK-GYPGLKG-DEGEAGDPGDDNNDIAPRGVKGAKGY 573
>UNIPROTKB|P82970 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527
GO:GO:0045893 GO:GO:0005654 GO:GO:0005730 GO:GO:0000785
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:CH471104 GO:GO:0031492 OrthoDB:EOG4CZBHP EMBL:AF250329
EMBL:AF250330 EMBL:AK094058 EMBL:AL391294 EMBL:BC005342
IPI:IPI00006157 RefSeq:NP_110390.1 UniGene:Hs.282204
ProteinModelPortal:P82970 IntAct:P82970 STRING:P82970
PhosphoSite:P82970 DMDM:23396771 PaxDb:P82970 PRIDE:P82970
DNASU:79366 Ensembl:ENST00000358130 GeneID:79366 KEGG:hsa:79366
UCSC:uc004eee.1 CTD:79366 GeneCards:GC0XM080370 HGNC:HGNC:8013
HPA:HPA000511 MIM:300385 neXtProt:NX_P82970 PharmGKB:PA31789
eggNOG:NOG134182 HOGENOM:HOG000113856 HOVERGEN:HBG094823
InParanoid:P82970 OMA:KDDGGKD ChiTaRS:HMGN5 GenomeRNAi:79366
NextBio:68337 ArrayExpress:P82970 Bgee:P82970 CleanEx:HS_NSBP1
Genevestigator:P82970 GermOnline:ENSG00000198157 Uniprot:P82970
Length = 282
Score = 113 (44.8 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 29/88 (32%), Positives = 48/88 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGM-KGSDEGE 62
KG + E ++ KG ++GK G++KGE K ++G++G G GE G KG DE E
Sbjct: 141 KGEAGKE-DKDEKGEEDGKEDKNGNEKGEDA-KEKEDGKKGEDGKGNGEDGKEKGEDEKE 198
Query: 63 R-GMKGSEEGERGMKGSDEGERGTKGSD 89
K + +G+ G ++G++ +G D
Sbjct: 199 EEDRKETGDGKENEDGKEKGDK-KEGKD 225
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 25/87 (28%), Positives = 44/87 (50%)
Query: 16 KGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG-SDEGERGMKGSDEGERGMKGSEEGERG 74
KG ++ + V E K +E + KG + + ++ KG ++G+ G+E+GE
Sbjct: 111 KGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDA 170
Query: 75 MKGSDEGERGTKGSDEGERGT-KGSDD 100
K ++G++G G GE G KG D+
Sbjct: 171 -KEKEDGKKGEDGKGNGEDGKEKGEDE 196
Score = 95 (38.5 bits), Expect = 0.00029, P = 0.00029
Identities = 24/68 (35%), Positives = 36/68 (52%)
Query: 26 KGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGT 85
+ +KGE + DE KG ++G+ G+++GE K E+G++G G GE G
Sbjct: 137 QNEEKGEAGKEDKDE-----KGEEDGKEDKNGNEKGEDA-KEKEDGKKGEDGKGNGEDGK 190
Query: 86 -KGSDEGE 92
KG DE E
Sbjct: 191 EKGEDEKE 198
>UNIPROTKB|F1RS99 [details] [associations]
symbol:COL6A5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0031012 "extracellular matrix" evidence=IDA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00530000063022
OMA:HLNAQFL EMBL:CU633554 Ensembl:ENSSSCT00000012249 Uniprot:F1RS99
Length = 2599
Score = 125 (49.1 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 41/105 (39%), Positives = 56/105 (53%)
Query: 1 MKG-KGRSVHEGERGMKGSD--EGKYVMKG--SDKGEYVMKSSDEGERGMKGS--DEGER 53
+KG KG S ++GERG G D +G+ G KGE D+G +G GS G
Sbjct: 1445 LKGAKGFSGYKGERGDDGVDGLDGEEGFHGFPGKKGE----KGDQGSQGSPGSRGPPGGY 1500
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G KG G+ G G +G KGS +GE+G +G G++GT+GS
Sbjct: 1501 GEKGFP-GDPGNPGQNNNIKGQKGS-KGEQGRQGKT-GQKGTQGS 1542
Score = 121 (47.7 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 38/98 (38%), Positives = 55/98 (56%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMK--SSDEGERGMKGSDEGERGMKGS--D 59
KG +G RG +G D G ++G D G + + GERG+KG+ +G G KG D
Sbjct: 1404 KGFQGLKGSRGHRGED-GDPGIRG-DTGPQGSRGITGCPGERGLKGA-KGFSGYKGERGD 1460
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G G+ G EEG G G +GE+G +GS +G G++G
Sbjct: 1461 DGVDGLDG-EEGFHGFPGK-KGEKGDQGS-QGSPGSRG 1495
Score = 112 (44.5 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 35/90 (38%), Positives = 49/90 (54%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE- 69
GERG+KG+ +G KG ++G+ + D GE G G G++G KG D+G +G GS
Sbjct: 1441 GERGLKGA-KGFSGYKG-ERGDDGVDGLD-GEEGFHGFP-GKKGEKG-DQGSQGSPGSRG 1495
Query: 70 -EGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G KG G+ G G + +G KGS
Sbjct: 1496 PPGGYGEKGFP-GDPGNPGQNNNIKGQKGS 1524
>UNIPROTKB|F1NSR4 [details] [associations]
symbol:LOC424167 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] InterPro:IPR002035 InterPro:IPR002223
Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234
PROSITE:PS50279 SMART:SM00131 SMART:SM00327 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 EMBL:AADN02020272 IPI:IPI00811346
Ensembl:ENSGALT00000017341 OMA:TYAITNM Uniprot:F1NSR4
Length = 1101
Score = 121 (47.7 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 39/100 (39%), Positives = 56/100 (56%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
KGR+ +G G+KG+ + G + G D +G+ K ++GERG GS G +G KG +
Sbjct: 220 KGRTGDDGTPGLKGAKGEPGLNGIPGRDGIEGKSGYKG-EKGERGECGSP-GTKGDKGPE 277
Query: 60 E--GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G RG +G + G +G G D+G G GS +GERG G
Sbjct: 278 GPIGPRGTRGLQ-GPQGQPG-DQGPEGLPGS-KGERGLPG 314
Score = 112 (44.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 39 DEGERGMKGSDEGERGMKGSDEGERGMKGS--EEGERGMKGSD--EGERGTKGSDEGERG 94
++GERG+ G G++G G D+G G+KG+ E G G+ G D EG+ G KG ++GERG
Sbjct: 207 EKGERGLPGP-AGKKGRTG-DDGTPGLKGAKGEPGLNGIPGRDGIEGKSGYKG-EKGERG 263
Query: 95 TKGS 98
GS
Sbjct: 264 ECGS 267
Score = 103 (41.3 bits), Expect = 0.00026, P = 0.00026
Identities = 35/97 (36%), Positives = 51/97 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G+S ++GE+G +G + G KG DKG G RG +G +G +G G D+G
Sbjct: 250 EGKSGYKGEKGERG-ECGSPGTKG-DKGP----EGPIGPRGTRGL-QGPQGQPG-DQGPE 301
Query: 64 GMKGSEEGERGMKGSD--EGERGTK-GSDEGERGTKG 97
G+ GS+ GERG+ G GE G +G+ G G
Sbjct: 302 GLPGSK-GERGLPGPPGLPGETGIGLPGPKGDTGLTG 337
>ASPGD|ASPL0000041560 [details] [associations]
symbol:AN10372 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001306 EnsemblFungi:CADANIAT00010262
OMA:NQLERIG Uniprot:C8VJF6
Length = 373
Score = 115 (45.5 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 34/96 (35%), Positives = 40/96 (41%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G H G G G G + GS +S G G+ GS G G+ GS G G
Sbjct: 212 GLGGHAGLGGSAGLG-GSAGIGGSGSATGEAGASASGAAGLGGSAGGSAGLGGSGSGSAG 270
Query: 65 MKGSEEGERGMKGSDEGERG--TKGSDEGERGTKGS 98
+ GS G G+ GS G G GS EG G GS
Sbjct: 271 IGGSAGGSAGLSGSASGSAGGSASGSAEGSAGLGGS 306
>UNIPROTKB|F1RTM0 [details] [associations]
symbol:LOC100522569 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008983 GeneTree:ENSGT00700000104099 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 OMA:GMRGWKG EMBL:CU062605
RefSeq:XP_003130932.1 Ensembl:ENSSSCT00000010170 GeneID:100522569
KEGG:ssc:100522569 Uniprot:F1RTM0
Length = 333
Score = 114 (45.2 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 34/93 (36%), Positives = 51/93 (54%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
GR +G +G KG D G+ G + +M ++GE G+ G E +G+KG D+G RG
Sbjct: 41 GRDGRDGTKGDKG-DAGEPGRPGGPGKDGMM--GEKGEPGVDGHVEA-KGIKG-DQGSRG 95
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G + G +G+ G GE+G G + G +G KG
Sbjct: 96 PPG-KHGPKGLVGPP-GEKGLSG-EPGPQGLKG 125
Score = 113 (44.8 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G+ GE+G G D G KG KG D+G RG G G +G+ G GE
Sbjct: 63 GPGKDGMMGEKGEPGVD-GHVEAKGI-KG-------DQGSRGPPGK-HGPKGLVGPP-GE 111
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G+ G E G +G+KG D+G+ G G EG +G+ G
Sbjct: 112 KGLSG-EPGPQGLKG-DKGDVGPIGP-EGPKGSTG 143
>ZFIN|ZDB-GENE-070209-167 [details] [associations]
symbol:col11a1a "collagen, type XI, alpha 1a"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-070209-167 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 SMART:SM00210 EMBL:GQ485664
IPI:IPI00968837 UniGene:Dr.3536 Uniprot:D6MUD2
Length = 1813
Score = 123 (48.4 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KG KGE +GE G G +G+ G+KG D GE G+ G
Sbjct: 766 YPGPRGVKGAD-GVRGLKGG-KGE-------KGEDGFPGF-KGDMGLKG-DRGELGLAGP 814
Query: 68 -SEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
E+G G KG GE G +GS GE+G G
Sbjct: 815 RGEDGPEGPKGRAGPNGESGPQGS-AGEKGKLG 846
Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
Identities = 38/103 (36%), Positives = 54/103 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKG--SDEGERGMKGS 58
GKG +G G KG D G +KG D+GE + ++G G KG GE G +GS
Sbjct: 784 GKGEKGEDGFPGFKG-DMG---LKG-DRGELGLAGPRGEDGPEGPKGRAGPNGESGPQGS 838
Query: 59 --DEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
++G+ G+ G G +G KGS G G G++ GE+G +G
Sbjct: 839 AGEKGKLGVPGLPGYPGRQGPKGST-GFPGFPGAN-GEKGGRG 879
Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKG-- 57
KGR+ GE G +GS ++GK + G G Y + +G G G GE+G +G
Sbjct: 824 KGRAGPNGESGPQGSAGEKGKLGVPGLP-G-YPGRQGPKGSTGFPGFPGANGEKGGRGVA 881
Query: 58 SDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD-----EGERGTKG 97
G RG +G G RG +G G +GT G+D GERG +G
Sbjct: 882 GKAGPRGQRGPTGPRGARGARGPTGKPGPKGTAGNDGPPGPPGERGPQG 930
>ZFIN|ZDB-GENE-080303-33 [details] [associations]
symbol:c1qtnf9 "C1q and tumor necrosis factor
related protein 9" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008983 ZFIN:ZDB-GENE-080303-33
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
EMBL:CR352265 IPI:IPI00996196 Ensembl:ENSDART00000128687
Bgee:E7F7K2 Uniprot:E7F7K2
Length = 339
Score = 114 (45.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 41/102 (40%), Positives = 56/102 (54%)
Query: 3 GK-GRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKG-- 57
GK G G G+KG +G+ + G KG+ V EG +G G+ +G++G++G
Sbjct: 105 GKMGPQGFAGPLGLKGQ-KGELGIPGPQGIKGD-VGPVGPEGPQGDIGN-KGDKGIQGPL 161
Query: 58 SDEGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
G G KG E G+ G KGS GERG+KG D GE+G KG
Sbjct: 162 GPPGRPGPKG-EIGQPGNKGSIGVRGERGSKG-DMGEQGPKG 201
Score = 105 (42.0 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 37/95 (38%), Positives = 49/95 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
GR +G RG KG D G G D G+ +K D+G+ G+ G G +G +G D GERG
Sbjct: 48 GRDGRDGARGDKG-DRGDIGTCG-DVGKPGLKG-DKGDSGIAGIT-GPKGKRG-DTGERG 102
Query: 65 MKGSEEGERGMKGSDEGERGTKGS--DEGERGTKG 97
G + G +G G G +G KG G +G KG
Sbjct: 103 PPG-KMGPQGFAGP-LGLKGQKGELGIPGPQGIKG 135
Score = 104 (41.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G GM G D G+ +G DKG+ + D G+ G+KG D+G+ G+ G G +G +G
Sbjct: 42 GHNGMPGRD-GRDGARG-DKGDRGDIGTCGDVGKPGLKG-DKGDSGIAGIT-GPKGKRG- 96
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ GERG G G +G G G +G KG
Sbjct: 97 DTGERGPPGK-MGPQGFAGP-LGLKGQKG 123
Score = 98 (39.6 bits), Expect = 0.00019, P = 0.00019
Identities = 27/63 (42%), Positives = 36/63 (57%)
Query: 39 DEGERGMKGSD--EGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERG 94
D G GM G D +G RG KG D G+ G G + G+ G+KG D+G+ G G +G+RG
Sbjct: 40 DPGHNGMPGRDGRDGARGDKG-DRGDIGTCG-DVGKPGLKG-DKGDSGIAGITGPKGKRG 96
Query: 95 TKG 97
G
Sbjct: 97 DTG 99
Score = 97 (39.2 bits), Expect = 0.00024, P = 0.00024
Identities = 39/105 (37%), Positives = 52/105 (49%)
Query: 4 KGRSVHEGERGMKGSD-----EGKYVMKGSDKGEYVMKSSD--EGERGMKGSD--EGERG 54
KG+ GERG G G +KG KGE + +G+ G G + +G+ G
Sbjct: 92 KGKRGDTGERGPPGKMGPQGFAGPLGLKGQ-KGELGIPGPQGIKGDVGPVGPEGPQGDIG 150
Query: 55 MKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
KG D+G +G G G G KG + G+ G KGS GERG+KG
Sbjct: 151 NKG-DKGIQGPLGPP-GRPGPKG-EIGQPGNKGSIGVRGERGSKG 192
>UNIPROTKB|F1MI94 [details] [associations]
symbol:F1MI94 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005200 "structural constituent of cytoskeleton"
evidence=IEA] InterPro:IPR026189 GO:GO:0005200 PANTHER:PTHR16742
IPI:IPI00701189 OMA:KKPSSTD GeneTree:ENSGT00690000102102
EMBL:DAAA02024343 Ensembl:ENSBTAT00000020732 Uniprot:F1MI94
Length = 394
Score = 115 (45.5 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 12 ERGMKGSDEGKYVMK--GSDKGEYVMKSSDEGERGMKGSD-----EGERGMKGSDEGERG 64
++ KGS +GK GS+KG+ K S + ++ KG + EGE+G D+ ++G
Sbjct: 190 KKDRKGSKKGKETPSDSGSEKGD-AKKDSKKSKKDSKGKESATESEGEKGDAKKDD-KKG 247
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
KGS++G+ S EGE+G D+ ++G KGS
Sbjct: 248 KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGS 279
Score = 103 (41.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 37/107 (34%), Positives = 54/107 (50%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EGE+G D+ ++G KGS +
Sbjct: 225 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKESATES-EGEKGDAKKDD-KKGKKGSKK 281
Query: 61 GER------GMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+ G KG ++ ++ KGS +G+ S EGE+ D
Sbjct: 282 GKESDSKAEGDKGDAKKDDKKDKKGSKKGKESATES-EGEKKDSKKD 327
Score = 102 (41.0 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 35/100 (35%), Positives = 52/100 (52%)
Query: 2 KGKGRSVH-EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK + EGE+G D+ K KGS KG+ S EG++G D+ ++ KGS +
Sbjct: 253 KGKESATESEGEKGDAKKDDKKG-KKGSKKGKE-SDSKAEGDKGDAKKDD-KKDKKGSKK 309
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDE-GERGTKGSD 99
G+ SE GE+ K S + + G K + GE+G + D
Sbjct: 310 GKESATESE-GEK--KDSKKDKAGKKDPTKAGEKGDESKD 346
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 39/108 (36%), Positives = 54/108 (50%)
Query: 2 KGKGRSVHEG-ERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK G E+G D K K KG+ S EGE+G D+ ++G KGS +
Sbjct: 198 KGKETPSDSGSEKGDAKKDSKK--SKKDSKGKESATES-EGEKGDAKKDD-KKGKKGSKK 253
Query: 61 GERGMKGSEEGERG--MKGSDEGERGTK-G--SD---EGERGTKGSDD 100
G+ SE GE+G K +G++G+K G SD EG++G DD
Sbjct: 254 GKESATESE-GEKGDAKKDDKKGKKGSKKGKESDSKAEGDKGDAKKDD 300
>ZFIN|ZDB-GENE-050327-86 [details] [associations]
symbol:zgc:113232 "zgc:113232" species:7955 "Danio
rerio" [GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-050327-86 HOGENOM:HOG000085653 InterPro:IPR008160
Pfam:PF01391 EMBL:AL929190 HOVERGEN:HBG004933
GeneTree:ENSGT00700000104194 EMBL:BC091810 IPI:IPI00865972
RefSeq:NP_001014381.1 UniGene:Dr.43135 STRING:Q58EP8
Ensembl:ENSDART00000087346 GeneID:541546 KEGG:dre:541546
OMA:GPTECDC OrthoDB:EOG4PVP0W NextBio:20879324 Uniprot:Q58EP8
Length = 655
Score = 118 (46.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
+G+RG++G G+ G D G+ + S G +G+ G G +G G D GE+G G
Sbjct: 347 KGDRGLRGRT-GRVGSVGPQGDSGDAGI-SGKPGPKGLPGPT-GAKGETGPD-GEKGSLG 402
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G +G KG D+G+ G++G D+G+ G KG
Sbjct: 403 -RKGGKGAKG-DKGDAGSRG-DKGQHGVKG 429
Score = 118 (46.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG + +GE+G G GK KG DKG+ + D+G+ G+KG G G+ G G
Sbjct: 389 KGETGPDGEKGSLGRKGGKGA-KG-DKGDAGSRG-DKGQHGVKGR-LGRDGLAGPI-GPP 443
Query: 64 GMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G+ G +EG RG G D+G+ G KG + GE G +D+ +
Sbjct: 444 GLPGPRGDEGPRGDLG-DKGQSGPKG-EPGEIGPGLTDEQI 482
Score = 107 (42.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 41/103 (39%), Positives = 50/103 (48%)
Query: 3 GK-GRSVHEGERGMKGSDEGKYVMKGSDKGE-----YVMKSSDEGERGMKGSDEGERGMK 56
GK G+ EG +G KG G G D+GE Y D G G KGS +G G+
Sbjct: 261 GKTGKQGPEGRQGQKGQT-GAPGFSG-DRGEQGYLGYTGVPGDRGRTGPKGS-KGTGGLP 317
Query: 57 GSDEGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
GSD GE G G+ G G+ G+ G +G KG D G RG G
Sbjct: 318 GSD-GEPGEDGTVGVPGVVGVPGAF-GPKGMKG-DRGLRGRTG 357
Score = 105 (42.0 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 40/102 (39%), Positives = 49/102 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG-----S 58
KG+S G +G+KGS GK +G + G K G G G D GE+G G
Sbjct: 245 KGKSGKLGGKGVKGS-VGKTGKQGPE-GRQGQKGQT-GAPGFSG-DRGEQGYLGYTGVPG 300
Query: 59 DEGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
D G G KGS+ G G+ GSD GE GT G G G G+
Sbjct: 301 DRGRTGPKGSK-GTGGLPGSDGEPGEDGTVGVP-GVVGVPGA 340
Score = 95 (38.5 bits), Expect = 0.0010, P = 0.0010
Identities = 31/91 (34%), Positives = 45/91 (49%)
Query: 11 GERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--DEGERGMK 66
G RG G GK KG ++G +K EG++G G + G +G KG D G +G+
Sbjct: 524 GPRGSPGKAGKAGKTGAKG-ERGPQGIKGV-EGQKGAPG-EAGAKGQKGQRGDAG-KGLP 579
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G +G +G++G K EG RG +G
Sbjct: 580 G-HDGHQGLRGLPGHPAEPKAGIEGPRGPRG 609
>RGD|735115 [details] [associations]
symbol:Col27a1 "collagen, type XXVII, alpha 1" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0005583 "fibrillar collagen" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 RGD:735115
GO:GO:0046872 InterPro:IPR008985 SUPFAM:SSF49899 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 HSSP:Q15201 GO:GO:0005201 HOGENOM:HOG000085654
KO:K06236 GO:GO:0005583 SMART:SM00210 HOVERGEN:HBG098141
GeneTree:ENSGT00700000104301 CTD:85301 OrthoDB:EOG4FBHSB
OMA:YSYPDRL EMBL:AY232999 IPI:IPI00331946 RefSeq:NP_942042.1
UniGene:Rn.229726 ProteinModelPortal:Q80ZF0 STRING:Q80ZF0
PRIDE:Q80ZF0 Ensembl:ENSRNOT00000010333 GeneID:298101
KEGG:rno:298101 UCSC:RGD:735115 InParanoid:Q80ZF0 NextBio:643160
ArrayExpress:Q80ZF0 Genevestigator:Q80ZF0 Uniprot:Q80ZF0
Length = 1855
Score = 123 (48.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 1 MKGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
MKG G GE+G+ G G+ ++G D G V +G+RG G D GE G KG +
Sbjct: 1160 MKGDLGPLGPPGEQGLIGQ-RGEPGLEG-DLGP-VGPDGLKGDRGDPGPD-GEHGEKGQE 1215
Query: 60 --EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
+GE G+ G G G++G EG+ G++G ++G+RG KG+ Y
Sbjct: 1216 GLKGEEGLPGPP-GITGVRGR-EGKPGSQG-EKGQRGAKGAKGY 1256
Score = 111 (44.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/106 (38%), Positives = 50/106 (47%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
KG G + H GE+G G EG KG + + D G +G +G G G+ G
Sbjct: 705 KGHPGAAGHPGEQGQPGP-EGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPG 763
Query: 58 SDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
SD GERG+ G + GE G G D GERG G D GE G G
Sbjct: 764 SD-GERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPG 808
Score = 108 (43.1 bits), Expect = 0.00014, P = 0.00014
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GE+G +G D GK GE G+RG +G + G+ G G EG +G++G E
Sbjct: 1320 KGEKGEQGED-GKTEGAPGPPGE----RGPVGDRGDRG-EPGDPGYPGQ-EGVQGLRG-E 1371
Query: 70 EGERGMKG--SDEGERGTKGSDEGERGTKG 97
G++G G G G KGS +GE G KG
Sbjct: 1372 PGQQGQPGHPGPRGRPGPKGS-KGEEGPKG 1400
Score = 101 (40.6 bits), Expect = 0.00075, P = 0.00075
Identities = 39/103 (37%), Positives = 49/103 (47%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
GR H+G G G ++G+ +GS KG Y + G G G +G RG G
Sbjct: 700 GRKGHKGHPGAAGHPGEQGQPGPEGSPGAKG-YPGRQGFPGPVGDPGP-KGSRGYIGLP- 756
Query: 61 GERGMKGSEEGERGMKG--SDEGERGTKG--SDEGERGTKGSD 99
G G+ GS+ GERG+ G GE G G D GERG G D
Sbjct: 757 GLFGLPGSD-GERGLPGIPGKRGEMGRPGFPGDFGERGPPGLD 798
>UNIPROTKB|Q80ZF0 [details] [associations]
symbol:Col27a1 "Collagen alpha-1(XXVII) chain"
species:10116 "Rattus norvegicus" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
RGD:735115 GO:GO:0046872 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 PROSITE:PS50025 HSSP:Q15201 GO:GO:0005201
HOGENOM:HOG000085654 KO:K06236 GO:GO:0005583 SMART:SM00210
HOVERGEN:HBG098141 GeneTree:ENSGT00700000104301 CTD:85301
OrthoDB:EOG4FBHSB OMA:YSYPDRL EMBL:AY232999 IPI:IPI00331946
RefSeq:NP_942042.1 UniGene:Rn.229726 ProteinModelPortal:Q80ZF0
STRING:Q80ZF0 PRIDE:Q80ZF0 Ensembl:ENSRNOT00000010333 GeneID:298101
KEGG:rno:298101 UCSC:RGD:735115 InParanoid:Q80ZF0 NextBio:643160
ArrayExpress:Q80ZF0 Genevestigator:Q80ZF0 Uniprot:Q80ZF0
Length = 1855
Score = 123 (48.4 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/104 (38%), Positives = 59/104 (56%)
Query: 1 MKGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
MKG G GE+G+ G G+ ++G D G V +G+RG G D GE G KG +
Sbjct: 1160 MKGDLGPLGPPGEQGLIGQ-RGEPGLEG-DLGP-VGPDGLKGDRGDPGPD-GEHGEKGQE 1215
Query: 60 --EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
+GE G+ G G G++G EG+ G++G ++G+RG KG+ Y
Sbjct: 1216 GLKGEEGLPGPP-GITGVRGR-EGKPGSQG-EKGQRGAKGAKGY 1256
Score = 111 (44.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/106 (38%), Positives = 50/106 (47%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
KG G + H GE+G G EG KG + + D G +G +G G G+ G
Sbjct: 705 KGHPGAAGHPGEQGQPGP-EGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPG 763
Query: 58 SDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
SD GERG+ G + GE G G D GERG G D GE G G
Sbjct: 764 SD-GERGLPGIPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPG 808
Score = 108 (43.1 bits), Expect = 0.00014, P = 0.00014
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GE+G +G D GK GE G+RG +G + G+ G G EG +G++G E
Sbjct: 1320 KGEKGEQGED-GKTEGAPGPPGE----RGPVGDRGDRG-EPGDPGYPGQ-EGVQGLRG-E 1371
Query: 70 EGERGMKG--SDEGERGTKGSDEGERGTKG 97
G++G G G G KGS +GE G KG
Sbjct: 1372 PGQQGQPGHPGPRGRPGPKGS-KGEEGPKG 1400
Score = 101 (40.6 bits), Expect = 0.00075, P = 0.00075
Identities = 39/103 (37%), Positives = 49/103 (47%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
GR H+G G G ++G+ +GS KG Y + G G G +G RG G
Sbjct: 700 GRKGHKGHPGAAGHPGEQGQPGPEGSPGAKG-YPGRQGFPGPVGDPGP-KGSRGYIGLP- 756
Query: 61 GERGMKGSEEGERGMKG--SDEGERGTKG--SDEGERGTKGSD 99
G G+ GS+ GERG+ G GE G G D GERG G D
Sbjct: 757 GLFGLPGSD-GERGLPGIPGKRGEMGRPGFPGDFGERGPPGLD 798
>UNIPROTKB|P12110 [details] [associations]
symbol:COL6A2 "Collagen alpha-2(VI) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0005201 "extracellular matrix
structural constituent" evidence=NAS] [GO:0005578 "proteinaceous
extracellular matrix" evidence=NAS] [GO:0030198 "extracellular
matrix organization" evidence=NAS;TAS] [GO:0030674 "protein
binding, bridging" evidence=NAS] [GO:0016337 "cell-cell adhesion"
evidence=NAS] [GO:0005576 "extracellular region" evidence=IDA;TAS]
[GO:0043234 "protein complex" evidence=IPI] [GO:0070208 "protein
heterotrimerization" evidence=IPI] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0030133 "transport vesicle" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005615
"extracellular space" evidence=IDA] [GO:0031012 "extracellular
matrix" evidence=ISS;IDA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0005615 GO:GO:0043234 GO:GO:0009749 GO:GO:0005578
GO:GO:0030198 GO:GO:0030674 GO:GO:0042383 GO:GO:0005788
GO:GO:0016337 GO:GO:0005581 GO:GO:0070208 InterPro:IPR008160
Pfam:PF01391 GO:GO:0030133 GO:GO:0005201 eggNOG:NOG256042 KO:K06238
MIM:158810 MIM:254090 Orphanet:610 Orphanet:75840 CTD:1292
HOVERGEN:HBG051051 OMA:RALCNHD OrthoDB:EOG45TCMN EMBL:AY029208
EMBL:BC065509 EMBL:M81835 EMBL:X15977 EMBL:X06195 EMBL:S75462
EMBL:S75425 EMBL:S75428 EMBL:S75430 EMBL:S75432 EMBL:S75434
EMBL:S75436 EMBL:S75438 EMBL:S75440 EMBL:S75442 EMBL:S75444
EMBL:S75446 EMBL:S75448 EMBL:S75450 EMBL:S75452 EMBL:S75454
EMBL:S75456 EMBL:S75458 EMBL:S75460 EMBL:M34572 EMBL:M34571
EMBL:M34573 EMBL:M34570 EMBL:AL096746 IPI:IPI00073454
IPI:IPI00220613 IPI:IPI00304840 PIR:S05378 PIR:S09646 PIR:T12549
RefSeq:NP_001840.3 RefSeq:NP_478054.2 RefSeq:NP_478055.2
UniGene:Hs.420269 ProteinModelPortal:P12110 SMR:P12110
IntAct:P12110 STRING:P12110 PhosphoSite:P12110 DMDM:125987812
REPRODUCTION-2DPAGE:P12110 PaxDb:P12110 PRIDE:P12110 DNASU:1292
Ensembl:ENST00000300527 Ensembl:ENST00000310645
Ensembl:ENST00000357838 Ensembl:ENST00000397763
Ensembl:ENST00000409416 GeneID:1292 KEGG:hsa:1292 UCSC:uc002zhy.1
UCSC:uc002zhz.1 UCSC:uc002zia.1 GeneCards:GC21P047518
H-InvDB:HIX0016186 HGNC:HGNC:2212 HPA:HPA007029 MIM:120240
MIM:255600 neXtProt:NX_P12110 Orphanet:289380 PharmGKB:PA26728
InParanoid:P12110 PhylomeDB:P12110 ChiTaRS:COL6A2 GenomeRNAi:1292
NextBio:5231 PMAP-CutDB:P12110 ArrayExpress:P12110 Bgee:P12110
Genevestigator:P12110 GermOnline:ENSG00000142173 Uniprot:P12110
Length = 1019
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 40/103 (38%), Positives = 56/103 (54%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG +G S G G+KG+ G +G KGE + D G +G GSD G +G KG
Sbjct: 393 KGYQGNSGAPGSPGVKGAKGGPGP-RGP-KGE-PGRRGDPGTKGSPGSD-GPKGEKGDPG 448
Query: 60 -EGERGMKGSEEGERGMKGSD--EGERGTKGS--DEGERGTKG 97
EG RG+ G E G +G KG G RG +G+ + G++G++G
Sbjct: 449 PEGPRGLAG-EVGNKGAKGDRGLPGPRGPQGALGEPGKQGSRG 490
Score = 107 (42.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 36/96 (37%), Positives = 51/96 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + GE G G + G KG D G + GE G KGS +G +G G+ G
Sbjct: 351 RGPDGYPGEAGSPG-ERGDQGGKG-DPGR-PGRRGPPGEIGAKGS-KGYQGNSGAP-GSP 405
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+KG++ G G +G +GE G +G D G +G+ GSD
Sbjct: 406 GVKGAKGGP-GPRGP-KGEPGRRG-DPGTKGSPGSD 438
Score = 107 (42.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 40/98 (40%), Positives = 46/98 (46%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG G G KG+ G G+D G+ K G G KG D G RG G GE
Sbjct: 306 KGEKGEFGADGRKGAP-GLAGKNGTD-GQKG-KLGRIGPPGCKG-DPGNRGPDGYP-GEA 360
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G G E G++G KG D G G +G GE G KGS Y
Sbjct: 361 GSPG-ERGDQGGKG-DPGRPGRRGPP-GEIGAKGSKGY 395
Score = 101 (40.6 bits), Expect = 0.00039, P = 0.00039
Identities = 40/110 (36%), Positives = 55/110 (50%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG-------SDEG 51
KG KG G RG +G+ + GK +G D G+ + D G+ G KG S G
Sbjct: 462 KGAKGDRGLPGPRGPQGALGEPGKQGSRG-DPGDAGPRG-DSGQPGPKGDPGRPGFSYPG 519
Query: 52 ERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKG 97
RG G ++GE G +G E G+ G+KG + G +G KG +D G G G
Sbjct: 520 PRGAPG-EKGEPGPRGPEGGRGDFGLKG-EPGRKGEKGEPADPGPPGEPG 567
>UNIPROTKB|F1P2F0 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0031012 "extracellular matrix" evidence=IEA]
[GO:0042383 "sarcolemma" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00131 SMART:SM00327 GO:GO:0005615
GO:GO:0004867 SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022
IPI:IPI00575769 OMA:GRHANTK EMBL:AADN02034485 EMBL:AADN02034486
Ensembl:ENSGALT00000006250 Uniprot:F1P2F0
Length = 3137
Score = 125 (49.1 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 36/91 (39%), Positives = 48/91 (52%)
Query: 11 GERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEGERGMK 66
GE G+ G D EG + GS GE S G +G KG + G+RG++G D GE G
Sbjct: 2112 GEMGLDGIDGEEGDKGLPGSS-GEKGF-SGRRGSKGAKGERGERGDRGLRG-DPGESGAD 2168
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
++ G RG KG + G+ G G G+RG G
Sbjct: 2169 NTQRGTRGQKG-EIGQMGEPGP-AGQRGQDG 2197
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/102 (36%), Positives = 52/102 (50%)
Query: 10 EGERGMKGS--DEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGM 65
EG++G+ GS ++G +GS KGE + G+RG++G D GE G + G RG
Sbjct: 2123 EGDKGLPGSSGEKGFSGRRGSKGAKGE----RGERGDRGLRG-DPGESGADNTQRGTRGQ 2177
Query: 66 KGS-----EEGERGMKGSDEG--ERGTKG--SDEGERGTKGS 98
KG E G G +G D G +G G G +GTKG+
Sbjct: 2178 KGEIGQMGEPGPAGQRGQDGGVGRKGMAGRRGPIGVKGTKGA 2219
Score = 115 (45.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/103 (35%), Positives = 51/103 (49%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG S G +G KG + G ++G D GE ++ G RG KG + G+ G G G
Sbjct: 2135 KGFSGRRGSKGAKGERGERGDRGLRG-DPGESGADNTQRGTRGQKG-EIGQMGEPGP-AG 2191
Query: 62 ERGMKGSEEGERGMKG--SDEGERGTKGS-----DEGERGTKG 97
+RG G G +GM G G +GTKG+ GE+G +G
Sbjct: 2192 QRGQDGGV-GRKGMAGRRGPIGVKGTKGALGQPGPAGEQGMRG 2233
Score = 109 (43.4 bits), Expect = 0.00019, P = 0.00019
Identities = 37/100 (37%), Positives = 45/100 (45%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
S G+RG+ G K G Y GERG G + G +G +G G RG K
Sbjct: 2042 SGQRGDRGLPGPIGPKGATGEIGYGGYPGDEGGPGERGPPGVN-GTQGFQGCP-GHRGTK 2099
Query: 67 GS-----EEGERGMKGSD--EGERGTKG--SDEGERGTKG 97
GS E+GE G G D +GE G KG GE+G G
Sbjct: 2100 GSRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGFSG 2139
>ZFIN|ZDB-GENE-070705-483 [details] [associations]
symbol:si:dkey-61l1.4 "si:dkey-61l1.4" species:7955
"Danio rerio" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-070705-483 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201
GeneTree:ENSGT00700000104301 EMBL:CT956057 IPI:IPI00835643
Ensembl:ENSDART00000145848 Bgee:F1R996 Uniprot:F1R996
Length = 1253
Score = 120 (47.3 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 34/99 (34%), Positives = 51/99 (51%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KGK G G +G KG+D K + K+ G RG++G +G +G +G+ +
Sbjct: 821 KGKPGPQGRNGPKGQKGNDARKGSSGKTGHAGRRGKAGKAGPRGLRGP-KGHKGQQGA-Q 878
Query: 61 GERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G G G +G+ G+ G +GE G KG EGE+G +G
Sbjct: 879 GNTGPPG-RQGQYGLPGIRGQKGENGAKGF-EGEKGDRG 915
Score = 113 (44.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 36/101 (35%), Positives = 53/101 (52%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--S 58
KG G++ H G RG G G ++G KG + + +G G G +G+ G+ G
Sbjct: 842 KGSSGKTGHAGRRGKAGK-AGPRGLRGP-KGHKGQQGA-QGNTGPPGR-QGQYGLPGIRG 897
Query: 59 DEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+GE G KG E+G+RG+ G G+ G KG+ G +G KG
Sbjct: 898 QKGENGAKGFEGEKGDRGLLGPPGGD-GLKGN-RGLQGVKG 936
Score = 110 (43.8 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 38/102 (37%), Positives = 52/102 (50%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG G + + G G KG +EG KG +M +GERG G G G+KG
Sbjct: 252 KGFPGVTGNRGPDGEKG-EEGPKGKKGPRGAPGIM--GPQGERGQSGLT-GLPGVKGQP- 306
Query: 61 GERGMKG--SEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G G++G E G +GM G EG++G++G G G+KGS
Sbjct: 307 GAAGIQGIDGEVGPQGMLGK-EGQKGSRGEPGGNGRTGSKGS 347
Score = 108 (43.1 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 38/107 (35%), Positives = 51/107 (47%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSD-KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
GR EG G KG D G KG + + +G +G+ G+ G RG +G G
Sbjct: 570 GRVGLEGPTGSKG-DVGSPGPKGKPGPNGFQGEQGPQGSQGVLGAP-GPRGKEGGI-GPP 626
Query: 64 GMKGSEEGERGMKGSDEGERGTKGS--------DEGERGTKGSDDYV 102
G+ G++ G +G KG D G RG G D GERG KG+ Y+
Sbjct: 627 GITGNQ-GPKGQKG-DPGHRGFSGQQGPPGLLGDGGERGLKGNKGYL 671
>ZFIN|ZDB-GENE-080721-25 [details] [associations]
symbol:zgc:194937 "zgc:194937" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] ZFIN:ZDB-GENE-080721-25
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00700000104194
EMBL:BX324177 IPI:IPI00860121 Ensembl:ENSDART00000113311
OMA:PTDTHIK Uniprot:F1QTQ2
Length = 687
Score = 117 (46.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGS 58
KG KG S G +G KG +EG G ++G + +G RG+ G +G+RG +G+
Sbjct: 191 KGVKGESGEPGRQGHKG-EEGDQGRTG-EQGTQGLPGK-QGLRGITGLMGPKGDRGPRGN 247
Query: 59 --DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
D G +G++G+ G++G +G GE G KGS +G G +G
Sbjct: 248 VGDLGPQGIQGAP-GDQGQRGK-YGETGPKGS-QGPEGLQG 285
Score = 111 (44.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 38/90 (42%), Positives = 46/90 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
GERG +G D G + G+ +G D G G+ G G G KG D G G G +
Sbjct: 384 GERGARGPD-GPAGLPGA-RGS----KGDPGLPGLPGP-AGFIGQKG-DRGAVGFTGPK- 434
Query: 71 GERGMKGSDEGERGTKGS--DEGERGTKGS 98
GE+G G +EG G KG DEGE G KGS
Sbjct: 435 GEQGPSG-EEGAPGDKGDVGDEGEPGEKGS 463
Score = 97 (39.2 bits), Expect = 0.00065, P = 0.00065
Identities = 29/87 (33%), Positives = 46/87 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G++G+ G V G + S G G+ G +G +G+KG + GE G +G +
Sbjct: 150 GDQGLPGPRGPPGVWDGKELCPNSCTSGLNGYTGLPGM-KGHKGVKG-ESGEPGRQG-HK 206
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKG 97
GE G +G GE+GT+G G++G +G
Sbjct: 207 GEEGDQGRT-GEQGTQGLP-GKQGLRG 231
>UNIPROTKB|I3LUR7 [details] [associations]
symbol:COL6A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042383 "sarcolemma" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA] [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00041
Pfam:PF00092 PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279
PROSITE:PS50853 SMART:SM00060 SMART:SM00131 SMART:SM00327
GO:GO:0005615 Gene3D:2.60.40.10 InterPro:IPR013783 GO:GO:0004867
SUPFAM:SSF49265 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0042383 InterPro:IPR008160
Pfam:PF01391 GO:GO:0031012 GeneTree:ENSGT00530000063022 OMA:GRHANTK
EMBL:CU550682 EMBL:CU570741 Ensembl:ENSSSCT00000028799
Uniprot:I3LUR7
Length = 3170
Score = 124 (48.7 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + D +G++G+ G+ G++G G G++G KG
Sbjct: 2089 GQRGIKGS-RGFPGEKG-ELGEIGLDGLDGEDGDKGLPGTS-GDKGSPGR-RGDKGPKG- 2143
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
++GERG G G+ G G D +RG KG
Sbjct: 2144 DKGERGDVGI-RGDPGDTGRDSQQRGPKG 2171
Score = 113 (44.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 38/105 (36%), Positives = 53/105 (50%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG GR +G +G KG + G ++G D G+ S G +G G D G G+ G D
Sbjct: 2130 KGSPGRRGDKGPKGDKG-ERGDVGIRG-DPGDTGRDSQQRGPKGESG-DLGPMGLPGRDG 2186
Query: 60 ----EGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GE G G G G+KG+ +G G +GS GE+GT+G+
Sbjct: 2187 VSGSPGEPGKSGGFGRRGPAGLKGN-KGGPGQQGS-VGEQGTRGA 2229
Score = 108 (43.1 bits), Expect = 0.00024, P = 0.00024
Identities = 41/101 (40%), Positives = 51/101 (50%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
S G+RG GS K + G D +G Y GERG G + G +G +G G+RG
Sbjct: 2037 SGQRGDRGPIGSIGPKGI-PGEDGYRG-YPGDEGGPGERGPPGMN-GTQGFQGCP-GQRG 2092
Query: 65 MKGS-----EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
+KGS E+GE G G D +GE G KG G G KGS
Sbjct: 2093 IKGSRGFPGEKGELGEIGLDGLDGEDGDKGLP-GTSGDKGS 2132
Score = 103 (41.3 bits), Expect = 0.00082, P = 0.00082
Identities = 32/91 (35%), Positives = 47/91 (51%)
Query: 11 GERGMKGSD--EGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
GE G+ G D +G + G+ DKG + D+G +G KG + G+ G++G D G+ G
Sbjct: 2107 GEIGLDGLDGEDGDKGLPGTSGDKGS-PGRRGDKGPKGDKG-ERGDVGIRG-DPGDTGRD 2163
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G +G G D G G G D G G+ G
Sbjct: 2164 SQQRGPKGESG-DLGPMGLPGRD-GVSGSPG 2192
>UNIPROTKB|F1MEH6 [details] [associations]
symbol:COL25A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0005887
"integral to plasma membrane" evidence=IEA] [GO:0005615
"extracellular space" evidence=IEA] [GO:0001540 "beta-amyloid
binding" evidence=IEA] GO:GO:0005615 GO:GO:0005887 GO:GO:0008201
GO:GO:0001540 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063274 EMBL:DAAA02016554 EMBL:DAAA02016555
EMBL:DAAA02016556 IPI:IPI00685227 Ensembl:ENSBTAT00000022980
OMA:KGTVGDP Uniprot:F1MEH6
Length = 505
Score = 115 (45.5 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 39/100 (39%), Positives = 51/100 (51%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G + +GE G+ G+ G +KG + GE +K D GE G KG D GE+G GS
Sbjct: 92 GMNGQKGEPGLPGAVGQNGIPGLKG-EPGEQGVKG-DAGENGPKG-DTGEKGDPGSSAA- 147
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G+KG E GE G G +GE G G G G KG ++
Sbjct: 148 -GIKG-EPGESGRPGQ-KGEPGLPGLP-GLPGIKGEPGFI 183
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 39/103 (37%), Positives = 52/103 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG----SDE 60
GR +GE G+ G G +KG + G ++ + G G+ G+ +GERG G D
Sbjct: 157 GRPGQKGEPGLPGLP-GLPGIKG-EPG-FIGPQGEPGLPGLPGT-KGERGEAGPPGRGDR 212
Query: 61 GERGMKG-----SEEGERGMKGSD-EGERGTKGSDEGERGTKG 97
GE G G E G RG KGS +G+RG KG D G G +G
Sbjct: 213 GEPGAPGPKGKQGESGTRGPKGSKGKGDRGDKG-DSGALGPRG 254
Score = 108 (43.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 4 KGRSVHEGERGMKGSDE--GKYVMKGSDKGEYVMKSS--DEGERGMKG--SDEGERGMKG 57
KG S +G+ G +G+D G + G KGE K + + G RG G +GE G+ G
Sbjct: 391 KGASGLDGKPGSRGTDGPMGPHGPAGP-KGERGEKGAMGEPGPRGPYGLPGKDGEPGLDG 449
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G RG KG + GE+G KG G +G KG + G+ G G D
Sbjct: 450 FP-GPRGEKG-DLGEKGEKGF-RGVKGEKG-EPGQPGLDGLD 487
>ZFIN|ZDB-GENE-030131-6117 [details] [associations]
symbol:dido1 "death inducer-obliterator 1"
species:7955 "Danio rerio" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR003618 InterPro:IPR017890 InterPro:IPR019787
Pfam:PF00628 Pfam:PF07500 PROSITE:PS50016 PROSITE:PS51321
SMART:SM00249 SMART:SM00510 ZFIN:ZDB-GENE-030131-6117 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.472.30
InterPro:IPR012921 Pfam:PF07744 SUPFAM:SSF46942
GeneTree:ENSGT00530000063844 EMBL:BX296530 EMBL:BX005175
IPI:IPI00971682 Ensembl:ENSDART00000110882 ArrayExpress:F1QQA3
Bgee:F1QQA3 Uniprot:F1QQA3
Length = 2779
Score = 123 (48.4 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVM--KSSDEGERGMKGSDEGERGMKGSDEGERGM 65
E ERG K S+ GK +G SD+G+ K SD G+ +G E ERG K SD G+
Sbjct: 2549 ESERG-KESERGKEFDRGKESDRGKESDRGKESDRGKESERGK-ESERG-KESDRGKESD 2605
Query: 66 KGSEEGERGMKGSDEGERGTKG--SDEGERGTKGSD 99
+G +E +RG K SD G+ +G SD G+ +G +
Sbjct: 2606 RG-KESDRG-KESDRGKESDRGKESDRGKESDRGKE 2639
Score = 122 (48.0 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 39/94 (41%), Positives = 53/94 (56%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
E +RG K S+ GK +G SD+G K SD G+ +G E +RG K SD G+ +G
Sbjct: 2579 ESDRG-KESERGKESERGKESDRG----KESDRGKESDRGK-ESDRG-KESDRGKESDRG 2631
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
+E +RG K SD G+ +G E +RG K SD Y
Sbjct: 2632 -KESDRG-KESDRGKESDRGK-ESDRG-KESDKY 2661
Score = 117 (46.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEGERGM 65
E +RG K SD GK +G SD+G+ + E ERG K SD G+ +G SD G+
Sbjct: 2561 EFDRG-KESDRGKESDRGKESDRGKESERGK-ESERG-KESDRGKESDRGKESDRGKESD 2617
Query: 66 KGSEEGERGMKGSDEGERGTKG--SDEGERGTKGSD 99
+G +E +RG K SD G+ +G SD G+ +G +
Sbjct: 2618 RG-KESDRG-KESDRGKESDRGKESDRGKESDRGKE 2651
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/92 (40%), Positives = 49/92 (53%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
E ERG K SD GK +G SD+G K SD G+ +G E +RG K SD G+ +G
Sbjct: 2591 ESERG-KESDRGKESDRGKESDRG----KESDRGKESDRGK-ESDRG-KESDRGKESDRG 2643
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+E +RG K SD G+ K D +R + D
Sbjct: 2644 -KESDRG-KESDRGKESDKYGDGDKRRDRDRD 2673
Score = 115 (45.5 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 36/92 (39%), Positives = 51/92 (55%)
Query: 10 EGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG 67
E ERG K S+ GK +G S++G+ + E +RG K SD G+ +G E ERG K
Sbjct: 2537 ESERG-KESERGKESERGKESERGKEFDRGK-ESDRG-KESDRGKESDRGK-ESERG-KE 2591
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
SE G+ +G E +RG K SD G+ +G +
Sbjct: 2592 SERGKESDRGK-ESDRG-KESDRGKESDRGKE 2621
Score = 107 (42.7 bits), Expect = 0.00027, P = 0.00027
Identities = 39/98 (39%), Positives = 53/98 (54%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+ +GR E +RG K SD GK S++G K S+ G+ +G E ERG K D G
Sbjct: 2520 RSRGR---ESDRG-KESDRGKE----SERG----KESERGKESERGK-ESERG-KEFDRG 2565
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
+ +G +E +RG K SD G+ +G E ERG K SD
Sbjct: 2566 KESDRG-KESDRG-KESDRGKESERGK-ESERG-KESD 2599
>UNIPROTKB|E2RIU7 [details] [associations]
symbol:COL21A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0031012 "extracellular matrix"
evidence=IEA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 InterPro:IPR001791 SMART:SM00210
GeneTree:ENSGT00700000104243 CTD:81578 KO:K16629 OMA:NGRQGIP
EMBL:AAEX03008406 RefSeq:XP_532180.3 Ensembl:ENSCAFT00000003677
GeneID:474945 KEGG:cfa:474945 NextBio:20850878 Uniprot:E2RIU7
Length = 957
Score = 118 (46.6 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 36/106 (33%), Positives = 58/106 (54%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGE--YVMKSSDEGERGMKGSDEGERGMKGS- 58
KG G +GM G+ +G+ G GE Y+ +G++G KGS +GE+G++G
Sbjct: 655 KGNKGEPGLQGMPGASGLKGEQGAVGPP-GEPGYLGLPGIQGKKGDKGS-QGEKGIQGQK 712
Query: 59 -DEGERGMKGSE--EGERGMKGS--DEGERGTKGSD--EGERGTKG 97
+ G +G+ G + +G GMKG ++GE G +G+ +GE G G
Sbjct: 713 GENGRQGIPGQQGIQGHHGMKGERGEKGEPGVRGATGPKGESGVDG 758
Score = 104 (41.7 bits), Expect = 0.00017, P = 0.00017
Identities = 38/101 (37%), Positives = 50/101 (49%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG+ GR +G+RG+ G G + + G KGE K D+G G G +G +G KG+
Sbjct: 505 KGEPGRDGEKGDRGLPGFP-GLHGIPGL-KGEMGPKG-DKGSTGFYGK-KGAKGEKGNS- 559
Query: 61 GERGMKGSEEGERGMKGSDE--GERGTKGSDEGERGTKGSD 99
G G+ G GE G G D G G KG + G G G D
Sbjct: 560 GFPGLPG-RAGEPGRHGKDGLMGSPGYKG-EVGPPGAPGQD 598
>UNIPROTKB|F1NRD4 [details] [associations]
symbol:ADIPOQ "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0005179
"hormone activity" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006006 "glucose metabolic process" evidence=IEA] [GO:0006635
"fatty acid beta-oxidation" evidence=IEA] [GO:0009749 "response to
glucose stimulus" evidence=IEA] [GO:0010739 "positive regulation of
protein kinase A signaling cascade" evidence=IEA] [GO:0010745
"negative regulation of macrophage derived foam cell
differentiation" evidence=IEA] [GO:0010804 "negative regulation of
tumor necrosis factor-mediated signaling pathway" evidence=IEA]
[GO:0010875 "positive regulation of cholesterol efflux"
evidence=IEA] [GO:0014912 "negative regulation of smooth muscle
cell migration" evidence=IEA] [GO:0030853 "negative regulation of
granulocyte differentiation" evidence=IEA] [GO:0031953 "negative
regulation of protein autophosphorylation" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032757 "positive regulation of
interleukin-8 production" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0033034 "positive
regulation of myeloid cell apoptotic process" evidence=IEA]
[GO:0033691 "sialic acid binding" evidence=IEA] [GO:0034115
"negative regulation of heterotypic cell-cell adhesion"
evidence=IEA] [GO:0034383 "low-density lipoprotein particle
clearance" evidence=IEA] [GO:0034612 "response to tumor necrosis
factor" evidence=IEA] [GO:0035690 "cellular response to drug"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043123 "positive regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043407 "negative
regulation of MAP kinase activity" evidence=IEA] [GO:0043499
"eukaryotic cell surface binding" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045650 "negative regulation of macrophage differentiation"
evidence=IEA] [GO:0045715 "negative regulation of low-density
lipoprotein particle receptor biosynthetic process" evidence=IEA]
[GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA]
[GO:0045776 "negative regulation of blood pressure" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045923 "positive regulation of fatty acid
metabolic process" evidence=IEA] [GO:0046326 "positive regulation
of glucose import" evidence=IEA] [GO:0048662 "negative regulation
of smooth muscle cell proliferation" evidence=IEA] [GO:0050728
"negative regulation of inflammatory response" evidence=IEA]
[GO:0050765 "negative regulation of phagocytosis" evidence=IEA]
[GO:0050805 "negative regulation of synaptic transmission"
evidence=IEA] [GO:0050873 "brown fat cell differentiation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070208 "protein heterotrimerization"
evidence=IEA] [GO:0070373 "negative regulation of ERK1 and ERK2
cascade" evidence=IEA] [GO:0070994 "detection of oxidative stress"
evidence=IEA] [GO:0071639 "positive regulation of monocyte
chemotactic protein-1 production" evidence=IEA] [GO:0072659
"protein localization to plasma membrane" evidence=IEA] [GO:0090317
"negative regulation of intracellular protein transport"
evidence=IEA] [GO:2000279 "negative regulation of DNA biosynthetic
process" evidence=IEA] [GO:2000461 "negative regulation of
eukaryotic cell surface binding" evidence=IEA] [GO:2000478
"positive regulation of metanephric glomerular visceral epithelial
cell development" evidence=IEA] [GO:2000481 "positive regulation of
cAMP-dependent protein kinase activity" evidence=IEA] [GO:2000534
"positive regulation of renal albumin absorption" evidence=IEA]
[GO:2000584 "negative regulation of platelet-derived growth factor
receptor-alpha signaling pathway" evidence=IEA] [GO:2000590
"negative regulation of metanephric mesenchymal cell migration"
evidence=IEA] InterPro:IPR008983 GO:GO:0005783 GO:GO:0045892
GO:GO:0005615 GO:GO:0032869 GO:GO:0043123 GO:GO:0009749
GO:GO:0051260 GO:GO:0043499 GO:GO:0050873 GO:GO:0042593
GO:GO:0006006 GO:GO:0046326 GO:GO:0010745 GO:GO:0010875
GO:GO:0006635 GO:GO:0032720 GO:GO:2000279 GO:GO:0034612
GeneTree:ENSGT00700000104099 GO:GO:0005581 GO:GO:0033691
GO:GO:0070373 GO:GO:2000461 GO:GO:0045599 GO:GO:0045721
GO:GO:0030853 GO:GO:0034115 GO:GO:0043124 GO:GO:0090317
GO:GO:0045715 GO:GO:0045650 GO:GO:0050765 GO:GO:0031953
GO:GO:0014912 GO:GO:0048662 GO:GO:0050805 GO:GO:0010804
GO:GO:2000481 GO:GO:0045923 GO:GO:0032757 GO:GO:0071639
GO:GO:0033034 GO:GO:0010739 GO:GO:2000534 GO:GO:0070208
GO:GO:0072659 Gene3D:2.60.120.40 InterPro:IPR001073
InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007
SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871 GO:GO:0010642
EMBL:AADN02024220 IPI:IPI00586605 Ensembl:ENSGALT00000008913
OMA:INDSTFM Uniprot:F1NRD4
Length = 244
Score = 109 (43.4 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 41 GERGMKGSD--EGERGMKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTK 96
G G+ G D +G+ G KG D+GE G++G + GE+G G+ EG RG G G +G K
Sbjct: 46 GHNGLPGRDGKDGKDGQKG-DKGEPGLQGVKGDTGEKGATGA-EGPRGFPGH-MGMKGQK 102
Query: 97 GSDDYV 102
G YV
Sbjct: 103 GESSYV 108
Score = 101 (40.6 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 32/75 (42%), Positives = 39/75 (52%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G H G G+ G D +GK KG DKGE G +G+KG D GE+G G+ EG
Sbjct: 40 GAPGHPGHNGLPGRDGKDGKDGQKG-DKGE-------PGLQGVKG-DTGEKGATGA-EGP 89
Query: 63 RGMKGSEEGERGMKG 77
RG G G +G KG
Sbjct: 90 RGFPG-HMGMKGQKG 103
Score = 92 (37.4 bits), Expect = 0.00047, P = 0.00047
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 36 KSSDEGERGMKGSDEGERGMKG--SDEGERGMKGSEEGERGMKGSDEGERGTKG 87
+ +G+ G KG D+GE G++G D GE+G G+E G RG G G +G KG
Sbjct: 53 RDGKDGKDGQKG-DKGEPGLQGVKGDTGEKGATGAE-GPRGFPGH-MGMKGQKG 103
>UNIPROTKB|E1BRR4 [details] [associations]
symbol:SCARA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005044 "scavenger receptor activity"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=IEA] [GO:0006879 "cellular iron ion homeostasis"
evidence=IEA] [GO:0009986 "cell surface" evidence=IEA] [GO:0034605
"cellular response to heat" evidence=IEA] [GO:0034755 "iron ion
transmembrane transport" evidence=IEA] [GO:0070207 "protein
homotrimerization" evidence=IEA] [GO:0070287 "ferritin receptor
activity" evidence=IEA] InterPro:IPR001190 InterPro:IPR017448
Pfam:PF00530 PRINTS:PR00258 PROSITE:PS00420 PROSITE:PS50287
SMART:SM00202 GO:GO:0009986 GO:GO:0034605 GO:GO:0005887
GO:GO:0006879 InterPro:IPR008160 Pfam:PF01391 GO:GO:0070207
GO:GO:0005044 SUPFAM:SSF56487 GO:GO:0034755
GeneTree:ENSGT00640000091447 OMA:ATGPMGM GO:GO:0070287
EMBL:AADN02018400 EMBL:AADN02018401 EMBL:AADN02018402
IPI:IPI00579695 Ensembl:ENSGALT00000026763 Uniprot:E1BRR4
Length = 495
Score = 114 (45.2 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 38/93 (40%), Positives = 48/93 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSDEG 61
K S+ G G KG D G M+G + G + G RGM G G RG+KG D+G
Sbjct: 299 KNISIIRGPPGPKG-DPGHEGMEG-EPG----RPGPPGLRGMPGERGLPGPRGLKG-DKG 351
Query: 62 ERGMKGSEEGERGMKGS--DEGERGTKGSDEGE 92
+ G G G RG KG +GE+G +GSD GE
Sbjct: 352 DFGPMGPA-GMRGFKGDRGPKGEKGDRGSDMGE 383
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 35/90 (38%), Positives = 47/90 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG HEG G G G ++G GE + G RG+KG D+G+ G G G R
Sbjct: 311 KGDPGHEGMEGEPGRP-GPPGLRGMP-GERGLP----GPRGLKG-DKGDFGPMGP-AGMR 362
Query: 64 GMKGSE--EGERGMKGSDEGERGTKGSDEG 91
G KG +GE+G +GSD GE + ++EG
Sbjct: 363 GFKGDRGPKGEKGDRGSDMGECSS-AAEEG 391
>ZFIN|ZDB-GENE-030131-2281 [details] [associations]
symbol:col4a5 "collagen, type IV, alpha 5 (Alport
syndrome)" species:7955 "Danio rerio" [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0007412 "axon target recognition" evidence=IMP]
[GO:0030198 "extracellular matrix organization" evidence=IMP]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
ZFIN:ZDB-GENE-030131-2281 InterPro:IPR016187 SUPFAM:SSF56436
GO:GO:0030198 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0007412 GO:GO:0031290 GO:GO:0005201
HOVERGEN:HBG004933 HOGENOM:HOG000085652 OrthoDB:EOG45DWPF
Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772 KO:K06237 CTD:1287
OMA:MPMNMEP EMBL:CR354588 EMBL:CR936978 IPI:IPI00835382
RefSeq:NP_001116702.1 UniGene:Dr.77841 SMR:B0UXF7
Ensembl:ENSDART00000073827 GeneID:323561 KEGG:dre:323561
NextBio:20808319 Uniprot:B0UXF7
Length = 1659
Score = 120 (47.3 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD 59
+G +G+RG+KG G+ V + S + V++ ++G+RG+ G G G G
Sbjct: 222 QGPKGEKGDRGLKGPPGPPGQ-VGEVSGSPDTVIQQGEKGDRGIPGDTGFPGPPGPPGPQ 280
Query: 60 EGERGMKGS--EEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G++G KG E G+RG G D GE G G D+G++G G
Sbjct: 281 GGQKGEKGEPGEAGKRGKPGKD-GEPGLLGYPGDKGDQGPPG 321
>UNIPROTKB|Q1JQB0 [details] [associations]
symbol:COL6A2 "Collagen, type VI, alpha 2" species:9913
"Bos taurus" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG256042
HOGENOM:HOG000111863 KO:K06238 GeneTree:ENSGT00530000063022
CTD:1292 HOVERGEN:HBG051051 OMA:RALCNHD EMBL:DAAA02003505
EMBL:DAAA02003506 EMBL:BC116097 IPI:IPI00695377
RefSeq:NP_001068594.1 UniGene:Bt.41907 STRING:Q1JQB0
Ensembl:ENSBTAT00000043412 GeneID:282194 KEGG:bta:282194
NextBio:20806019 Uniprot:Q1JQB0
Length = 917
Score = 117 (46.2 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 41/102 (40%), Positives = 54/102 (52%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG +G + G G+KG+ G +G KGE + D G +G GSD G +G KG
Sbjct: 392 KGYQGNNGAPGSPGLKGAKGGPGP-RGP-KGE-PGRRGDPGTKGGPGSD-GPKGEKGDPG 447
Query: 60 -EGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
EG RG+ G E G +G KG G RG +G+ GE G +GS
Sbjct: 448 PEGPRGLAG-EVGNKGAKGDRGLPGPRGPQGT-VGEPGKQGS 487
Score = 113 (44.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/98 (40%), Positives = 47/98 (47%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG G G KG+ G G+D G+ K G G KG D G+RG G GE
Sbjct: 305 KGEKGEFGADGRKGAP-GLAGKNGTD-GQKG-KLGRIGPPGCKG-DTGDRGPDGY-VGEA 359
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G G E G++G KG D G G +G GE G KGS Y
Sbjct: 360 GSPG-ERGDQGSKG-DPGRPGRRGPP-GENGAKGSKGY 394
Score = 99 (39.9 bits), Expect = 0.00056, P = 0.00056
Identities = 41/110 (37%), Positives = 53/110 (48%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG-------SDEG 51
KG KG G RG +G+ + GK +G D G+ + D G+ G KG S G
Sbjct: 461 KGAKGDRGLPGPRGPQGTVGEPGKQGSRG-DPGDAGPRG-DSGQPGPKGDPGRPGFSYPG 518
Query: 52 ERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKG 97
RG G D+GE G G E G+ G KG + G +G KG +D G G G
Sbjct: 519 PRGAPG-DKGEPGPPGPEGGRGDFGSKG-EPGRKGQKGEPADPGPPGEPG 566
>UNIPROTKB|P0C862 [details] [associations]
symbol:C1QTNF9 "Complement C1q and tumor necrosis
factor-related protein 9A" species:9606 "Homo sapiens" [GO:0005179
"hormone activity" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR008983 HOGENOM:HOG000085653
HOVERGEN:HBG108220 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
eggNOG:NOG12793 CTD:338872 OMA:GMRGWKG OrthoDB:EOG4D7Z64
EMBL:AY358145 EMBL:AL359736 EMBL:BC040438 IPI:IPI00552240
RefSeq:NP_848635.2 UniGene:Hs.362854 ProteinModelPortal:P0C862
SMR:P0C862 IntAct:P0C862 STRING:P0C862 DMDM:205686199 PRIDE:P0C862
DNASU:338872 Ensembl:ENST00000332018 Ensembl:ENST00000382066
Ensembl:ENST00000382071 GeneID:338872 KEGG:hsa:338872
UCSC:uc001upj.3 GeneCards:GC13P024881 H-InvDB:HIX0079546
HGNC:HGNC:28732 MIM:614285 neXtProt:NX_P0C862 PharmGKB:PA145008937
InParanoid:P0C862 GenomeRNAi:338872 NextBio:97187 Bgee:P0C862
CleanEx:HS_C1QTNF9 Genevestigator:P0C862 Uniprot:P0C862
Length = 333
Score = 111 (44.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 36/95 (37%), Positives = 51/95 (53%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDEGE 62
G+ GE+G +G+D GK KG KG+ + S G+ G KG GE+G++G + G
Sbjct: 65 GKDGTSGEKGERGAD-GKVEAKGI-KGDQGSRGSP-GKHGPKGLAGPMGEKGLRG-ETGP 120
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G KG++ G+ G G EG RG G G G G
Sbjct: 121 QGQKGNK-GDVGPTGP-EGPRGNIGP-LGPTGLPG 152
>UNIPROTKB|F1MKG2 [details] [associations]
symbol:COL6A2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070208 "protein heterotrimerization" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0042383
"sarcolemma" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0005615 "extracellular space" evidence=IEA]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
GO:GO:0005615 GO:GO:0043234 GO:GO:0042383 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012
GeneTree:ENSGT00530000063022 EMBL:DAAA02003505 EMBL:DAAA02003506
IPI:IPI00837992 Ensembl:ENSBTAT00000025663 ArrayExpress:F1MKG2
Uniprot:F1MKG2
Length = 1027
Score = 117 (46.2 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 41/102 (40%), Positives = 54/102 (52%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD- 59
KG +G + G G+KG+ G +G KGE + D G +G GSD G +G KG
Sbjct: 401 KGYQGNNGAPGSPGLKGAKGGPGP-RGP-KGE-PGRRGDPGTKGGPGSD-GPKGEKGDPG 456
Query: 60 -EGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
EG RG+ G E G +G KG G RG +G+ GE G +GS
Sbjct: 457 PEGPRGLAG-EVGNKGAKGDRGLPGPRGPQGT-VGEPGKQGS 496
Score = 113 (44.8 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 40/98 (40%), Positives = 47/98 (47%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG G G KG+ G G+D G+ K G G KG D G+RG G GE
Sbjct: 314 KGEKGEFGADGRKGAP-GLAGKNGTD-GQKG-KLGRIGPPGCKG-DTGDRGPDGY-VGEA 368
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G G E G++G KG D G G +G GE G KGS Y
Sbjct: 369 GSPG-ERGDQGSKG-DPGRPGRRGPP-GENGAKGSKGY 403
Score = 99 (39.9 bits), Expect = 0.00064, P = 0.00064
Identities = 41/110 (37%), Positives = 53/110 (48%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG-------SDEG 51
KG KG G RG +G+ + GK +G D G+ + D G+ G KG S G
Sbjct: 470 KGAKGDRGLPGPRGPQGTVGEPGKQGSRG-DPGDAGPRG-DSGQPGPKGDPGRPGFSYPG 527
Query: 52 ERGMKGSDEGERGMKGSE--EGERGMKGSDEGERGTKG--SDEGERGTKG 97
RG G D+GE G G E G+ G KG + G +G KG +D G G G
Sbjct: 528 PRGAPG-DKGEPGPPGPEGGRGDFGSKG-EPGRKGQKGEPADPGPPGEPG 575
>RGD|1560876 [details] [associations]
symbol:C1qtnf9 "C1q and tumor necrosis factor related protein 9"
species:10116 "Rattus norvegicus" [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR008983 RGD:1560876
GeneTree:ENSGT00700000104099 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
CTD:338872 OMA:GMRGWKG OrthoDB:EOG4D7Z64 IPI:IPI00765012
RefSeq:NP_001178820.1 UniGene:Rn.231434 Ensembl:ENSRNOT00000018533
GeneID:364395 KEGG:rno:364395 UCSC:RGD:1560876 NextBio:685315
Uniprot:D3ZJ76
Length = 331
Score = 110 (43.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 38/95 (40%), Positives = 48/95 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G+ GE+G G+D G+ KG KG D G RG G G +G G GE
Sbjct: 61 GPGKDGIRGEKGEPGAD-GRVEAKGI-KG-------DPGSRGSPGK-HGPKGSIGPT-GE 109
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G+ G E G +G KG D+GE G G EG G+ G
Sbjct: 110 QGLPG-ETGPQGQKG-DKGEVGPTGP-EGLMGSTG 141
Score = 104 (41.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/102 (35%), Positives = 52/102 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDE-----GERGMKGSD 59
GR +G +G KG D G+ G + + ++GE G G E G+ G +GS
Sbjct: 39 GRDGRDGAKGDKG-DTGEPGHPGGPGKDGIR--GEKGEPGADGRVEAKGIKGDPGSRGSP 95
Query: 60 EGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+ G KGS GE+G+ G + G +G KG D+GE G G +
Sbjct: 96 -GKHGPKGSIGPTGEQGLPG-ETGPQGQKG-DKGEVGPTGPE 134
Score = 102 (41.0 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD--------E 60
G G+ G D G+ KG DKG+ + + G G G D GE+G G+D +
Sbjct: 33 GHNGLPGRD-GRDGAKG-DKGD----TGEPGHPGGPGKDGIRGEKGEPGADGRVEAKGIK 86
Query: 61 GERGMKGSEEGERGMKGS--DEGERGTKGSD--EGERGTKG 97
G+ G +GS G+ G KGS GE+G G +G++G KG
Sbjct: 87 GDPGSRGSP-GKHGPKGSIGPTGEQGLPGETGPQGQKGDKG 126
Score = 95 (38.5 bits), Expect = 0.00038, P = 0.00038
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 10 EGERGMKGSDEGKYVMKGS--DKGEYVM--KSSDEGERGMKGS--DEGERGMKGSDE--G 61
+G+ G +GS GK+ KGS GE + ++ +G++G KG G G+ GS G
Sbjct: 86 KGDPGSRGSP-GKHGPKGSIGPTGEQGLPGETGPQGQKGDKGEVGPTGPEGLMGSTGPLG 144
Query: 62 ERGMKG-----SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
+G+ G + G RG G +GE G +G +G+RG KG
Sbjct: 145 PKGLPGPVGPIGKPGPRGEAGPMGPQGEPGVRGMRGWKGDRGEKG 189
>MGI|MGI:3045252 [details] [associations]
symbol:C1qtnf9 "C1q and tumor necrosis factor related
protein 9" species:10090 "Mus musculus" [GO:0005179 "hormone
activity" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008983 MGI:MGI:3045252 GeneTree:ENSGT00700000104099
HOGENOM:HOG000085653 HOVERGEN:HBG108220 GO:GO:0005581
Gene3D:2.60.120.40 InterPro:IPR001073 InterPro:IPR008160
Pfam:PF00386 Pfam:PF01391 PRINTS:PR00007 SMART:SM00110
SUPFAM:SSF49842 PROSITE:PS50871 HSSP:Q15201 CTD:338872
eggNOG:NOG266951 OMA:GMRGWKG OrthoDB:EOG4D7Z64 EMBL:DQ002401
EMBL:AK033673 EMBL:BC115632 EMBL:BC115633 IPI:IPI00125166
IPI:IPI00850486 RefSeq:NP_898998.2 UniGene:Mm.319636
ProteinModelPortal:Q4ZJN1 SMR:Q4ZJN1 PRIDE:Q4ZJN1
Ensembl:ENSMUST00000025940 GeneID:239126 KEGG:mmu:239126
UCSC:uc007uff.2 InParanoid:Q4ZJN1 NextBio:384003 Bgee:Q4ZJN1
CleanEx:MM_C1QTNF9 Genevestigator:Q4ZJN1 Uniprot:Q4ZJN1
Length = 333
Score = 110 (43.8 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 38/95 (40%), Positives = 48/95 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G+ GE+G G+D G+ KG KG D G RG G G +G G GE
Sbjct: 63 GPGKDGIRGEKGEPGAD-GRVEAKGI-KG-------DPGSRGSPGK-HGPKGSIGPT-GE 111
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G+ G E G +G KG D+GE G G EG G+ G
Sbjct: 112 QGLPG-ETGPQGQKG-DKGEVGPTGP-EGLMGSTG 143
Score = 104 (41.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 36/102 (35%), Positives = 52/102 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDE-----GERGMKGSD 59
GR +G +G KG D G+ G + + ++GE G G E G+ G +GS
Sbjct: 41 GRDGRDGAKGDKG-DAGEPGHPGGPGKDGIR--GEKGEPGADGRVEAKGIKGDPGSRGSP 97
Query: 60 EGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G+ G KGS GE+G+ G + G +G KG D+GE G G +
Sbjct: 98 -GKHGPKGSIGPTGEQGLPG-ETGPQGQKG-DKGEVGPTGPE 136
Score = 102 (41.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD--------E 60
G G+ G D G+ KG DKG+ + + G G G D GE+G G+D +
Sbjct: 35 GHNGLPGRD-GRDGAKG-DKGD----AGEPGHPGGPGKDGIRGEKGEPGADGRVEAKGIK 88
Query: 61 GERGMKGSEEGERGMKGS--DEGERGTKGSD--EGERGTKG 97
G+ G +GS G+ G KGS GE+G G +G++G KG
Sbjct: 89 GDPGSRGSP-GKHGPKGSIGPTGEQGLPGETGPQGQKGDKG 128
Score = 95 (38.5 bits), Expect = 0.00039, P = 0.00039
Identities = 35/105 (33%), Positives = 53/105 (50%)
Query: 10 EGERGMKGSDEGKYVMKGS--DKGEYVM--KSSDEGERGMKGS--DEGERGMKGSDE--G 61
+G+ G +GS GK+ KGS GE + ++ +G++G KG G G+ GS G
Sbjct: 88 KGDPGSRGSP-GKHGPKGSIGPTGEQGLPGETGPQGQKGDKGEVGPTGPEGLMGSTGPLG 146
Query: 62 ERGMKG-----SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
+G+ G + G RG G +GE G +G +G+RG KG
Sbjct: 147 PKGLPGPMGPIGKPGPRGEAGPMGPQGEPGVRGMRGWKGDRGEKG 191
>MGI|MGI:2444259 [details] [associations]
symbol:Col6a6 "collagen, type VI, alpha 6" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0031012 "extracellular matrix" evidence=ISO] InterPro:IPR002035
Pfam:PF00092 PROSITE:PS50234 SMART:SM00327 MGI:MGI:2444259
GO:GO:0007155 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0031012 KO:K06238 GeneTree:ENSGT00530000063022
eggNOG:NOG237718 HOGENOM:HOG000111864 OrthoDB:EOG476JZ9
HOVERGEN:HBG107743 CTD:131873 EMBL:AM748259 EMBL:AM748260
EMBL:AM748261 EMBL:AM748262 EMBL:AK054356 IPI:IPI00226310
IPI:IPI00855103 RefSeq:NP_001096077.1 RefSeq:NP_766515.2
UniGene:Mm.482507 HSSP:P11215 ProteinModelPortal:Q8C6K9 SMR:Q8C6K9
STRING:Q8C6K9 PhosphoSite:Q8C6K9 PRIDE:Q8C6K9
Ensembl:ENSMUST00000060896 Ensembl:ENSMUST00000098441 GeneID:245026
KEGG:mmu:245026 UCSC:uc009ris.1 UCSC:uc009rit.1 InParanoid:Q8C6K9
NextBio:386530 Bgee:Q8C6K9 Genevestigator:Q8C6K9 Uniprot:Q8C6K9
Length = 2265
Score = 120 (47.3 bits), Expect = 8.9e-06, P = 8.9e-06
Identities = 39/99 (39%), Positives = 50/99 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVM-KGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--E 60
KG + GE G+ G M + KG + K +G RG+ G +EGE G G D +
Sbjct: 1411 KGSDGYLGEEGIAGERGASGPMGEQGTKGCFGAKGP-KGTRGLSG-EEGEVGEDGLDGLD 1468
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
GE+G G G RG KG DEG +G G G+RG KG
Sbjct: 1469 GEQGDHGIP-GRRGEKG-DEGSQGNPGRRGAAGDRGAKG 1505
Score = 116 (45.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 39/102 (38%), Positives = 51/102 (50%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKG--SDKGEYVMKSSD--EGERGMKGSDEGERGMKG 57
+G S GE+G KG +G +G ++GE D +GE+G G G RG KG
Sbjct: 1426 RGASGPMGEQGTKGCFGAKGPKGTRGLSGEEGEVGEDGLDGLDGEQGDHGIP-GRRGEKG 1484
Query: 58 SDEGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
DEG +G G G+RG KG G+ GT G D +G KG
Sbjct: 1485 -DEGSQGNPGRRGAAGDRGAKGL-RGDPGTPGRDSSIQGPKG 1524
Score = 115 (45.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 41/104 (39%), Positives = 53/104 (50%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG-----SDEGERGM 55
M G + +G G KGSD G Y+ + GE S GE+G KG +G RG+
Sbjct: 1396 MGDPGSAGKKGPPGFKGSD-G-YLGEEGIAGERGA-SGPMGEQGTKGCFGAKGPKGTRGL 1452
Query: 56 KGSDEGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
G +EGE G G + +GE+G G G RG KG DEG +G G
Sbjct: 1453 SG-EEGEVGEDGLDGLDGEQGDHGIP-GRRGEKG-DEGSQGNPG 1493
Score = 105 (42.0 bits), Expect = 0.00035, P = 0.00035
Identities = 37/98 (37%), Positives = 51/98 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G GE G KG ++G MKG +G G +G GS +G +G G D GE+
Sbjct: 1580 RGPQGPRGEVGEKG-EKGSLGMKGP-QGP-PGPGGQAGSQGHLGS-QGNKGEPG-DLGEK 1634
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G G G RG++G D+G G GS G +GTKG + +
Sbjct: 1635 GAAGFP-GPRGLQG-DDGSPGY-GSI-GRKGTKGQEGF 1668
Score = 104 (41.7 bits), Expect = 0.00045, P = 0.00045
Identities = 38/103 (36%), Positives = 50/103 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE--- 60
KG G G GS +G +G+ KGE D GE+G G G RG++G D
Sbjct: 1601 KGPQGPPGPGGQAGS-QGHLGSQGN-KGE----PGDLGEKGAAGFP-GPRGLQGDDGSPG 1653
Query: 61 ----GERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
G +G KG E GE G+KG D G+ G G + G +G +G
Sbjct: 1654 YGSIGRKGTKGQEGFPGESGLKG-DIGDPGDPG-EAGPKGARG 1694
>ZFIN|ZDB-GENE-030131-4444 [details] [associations]
symbol:si:dkey-211m23.2 "si:dkey-211m23.2"
species:7955 "Danio rerio" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 Pfam:PF00014 Pfam:PF00092 PRINTS:PR00759
PROSITE:PS50234 PROSITE:PS50279 SMART:SM00131 SMART:SM00327
ZFIN:ZDB-GENE-030131-4444 GO:GO:0004867 Gene3D:4.10.410.10
InterPro:IPR020901 SUPFAM:SSF57362 PROSITE:PS00280
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00530000063022
EMBL:CU182074 IPI:IPI00920640 Ensembl:ENSDART00000115121
ArrayExpress:F1QAB3 Bgee:F1QAB3 Uniprot:F1QAB3
Length = 1208
Score = 117 (46.2 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 40/110 (36%), Positives = 60/110 (54%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVM-----KSSDEGERGMKGSDEGERGM 55
KG +G S G++G G D G KG KGE + + EG+ G KG ++GERG
Sbjct: 261 KGERGPSGPAGKKGRPGED-GTPGAKGQ-KGEAGLSGLPGREGTEGKPGYKG-EQGERGE 317
Query: 56 KGSD--EGERGMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
G+ +G+RG +G +G RG++G +G+ G +G+ +GERG G
Sbjct: 318 CGTPGIKGDRGPEGPVGTQGSRGLQGLPGPQGDIGPEGAQGKKGERGPAG 367
Score = 105 (42.0 bits), Expect = 0.00018, P = 0.00018
Identities = 39/106 (36%), Positives = 54/106 (50%)
Query: 2 KGKGRSVHEGERGMKG--SDEGK--YVMKGSDKGEYVMKSSDEGERGMKGSD-EGERGMK 56
+G+G +G+RG++G G+ +KG DKGE+ G G+ G +GE+G++
Sbjct: 421 QGEGFPGPKGDRGLEGPKGPRGQPGLGLKG-DKGEFGPPGLP-GPVGLTGVGIQGEKGVE 478
Query: 57 G--SDEGERGMKGSEEGERGMKGSD--EGERGTKGS-DEGERGTKG 97
G G RG G EG G KG GE GT G +GE G KG
Sbjct: 479 GPRGPPGGRGPPG--EGFAGPKGEQGLPGEMGTPGERGQGEPGAKG 522
>RGD|1309595 [details] [associations]
symbol:Taf15 "TAF15 RNA polymerase II, TATA box binding protein
(TBP)-associated factor" species:10116 "Rattus norvegicus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
RGD:1309595 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC119615 IPI:IPI00950713
PRIDE:F1M8P1 Ensembl:ENSRNOT00000014438 ArrayExpress:F1M8P1
Uniprot:F1M8P1
Length = 554
Score = 113 (44.8 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 41/107 (38%), Positives = 51/107 (47%)
Query: 3 GKGRSVHEGERGMKGSDEG-KYVMKGSDKGEYVM-KSSDEGERGMKGSDEGERG--MKGS 58
G RS + G+RG G D G Y G D+G Y + G+RG G D G G +G+
Sbjct: 444 GGDRSGYGGDRGGYGGDRGGSY---GGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRRGA 500
Query: 59 DEGERGM-KGSEEGER-GMKGSDEGERGTKGSDEGERGTK--GSDDY 101
G+RG G G+R G G D G G G D G G K G +DY
Sbjct: 501 YGGDRGGGSGGYGGDRSGGYGGDRG--GGYGGDRGGYGGKMGGRNDY 545
Score = 108 (43.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 38/106 (35%), Positives = 47/106 (44%)
Query: 4 KGRSVHEGERGMKGSDE--GKYVMKGSDK--GEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+GR G+RG G+D G Y G D+ G Y S G G + G+RG G D
Sbjct: 404 RGRGGRGGDRGGYGADRSGGGY---GGDRSGGSYGADRSGGGYGGDRSGYGGDRGGYGGD 460
Query: 60 EGER--GMKGSEEGERGMKGSDEG----ERGTKGSDEGERGTKGSD 99
G G +G G+RG G D G +RG G D RG G D
Sbjct: 461 RGGSYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDR--RGAYGGD 504
Score = 105 (42.0 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 38/105 (36%), Positives = 49/105 (46%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEG---ER--GMKGSDEGERGMKGS 58
+GR + GERG +G G+ G D+G Y S G +R G G+D G G
Sbjct: 393 RGRG-YGGERGFRGRG-GR----GGDRGGYGADRSGGGYGGDRSGGSYGADRSGGGYGGD 446
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEG----ERGTKGSD 99
G G +G G+RG GS G+RG G D G +RG G D
Sbjct: 447 RSGYGGDRGGYGGDRG--GSYGGDRGGYGGDRGGYGGDRGGYGGD 489
>MGI|MGI:1924268 [details] [associations]
symbol:Col25a1 "collagen, type XXV, alpha 1" species:10090
"Mus musculus" [GO:0001540 "beta-amyloid binding" evidence=ISO]
[GO:0005576 "extracellular region" evidence=ISA] [GO:0005581
"collagen" evidence=IEA] [GO:0005615 "extracellular space"
evidence=ISO] [GO:0005887 "integral to plasma membrane"
evidence=ISA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008201 "heparin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
MGI:MGI:1924268 GO:GO:0005615 GO:GO:0005887 GO:GO:0008201
GO:GO:0001540 HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 EMBL:CH466532
GeneTree:ENSGT00530000063274 CTD:84570 HOVERGEN:HBG101380
EMBL:AF315290 EMBL:AC091312 EMBL:AC110540 EMBL:AC114642
EMBL:AC164078 IPI:IPI00117959 RefSeq:NP_084114.2 UniGene:Mm.91728
STRING:Q99MQ5 PhosphoSite:Q99MQ5 PRIDE:Q99MQ5
Ensembl:ENSMUST00000080335 GeneID:77018 KEGG:mmu:77018
UCSC:uc008riw.1 InParanoid:Q99MQ5 OMA:GPKGSKX NextBio:346304
CleanEx:MM_COL25A1 Genevestigator:Q99MQ5 Uniprot:Q99MQ5
Length = 666
Score = 114 (45.2 bits), Expect = 9.4e-06, P = 9.4e-06
Identities = 39/101 (38%), Positives = 51/101 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKG----S 58
GR +GE G+ G G +KG + G ++ + G G+ G+ D GE G G
Sbjct: 320 GRPGQKGEPGLPGLP-GLPGIKG-EPG-FIGPQGEPGLPGLPGTKGDRGEAGPPGRGERG 376
Query: 59 DEGERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKG 97
D G G KG E G RG KGS +G+RG KG D G G +G
Sbjct: 377 DPGAPGPKGKQGESGARGPKGS-KGDRGDKG-DSGALGPRG 415
Score = 108 (43.1 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 4 KGRSVHEGERGMKGSDE--GKYVMKGSDKGEYVMKSS--DEGERGMKG--SDEGERGMKG 57
KG S +G+ G +G+D G + G KGE K + + G RG G +GE G+ G
Sbjct: 552 KGASGLDGKPGSRGADGPIGPHGPAGP-KGERGEKGAMGEPGPRGPYGLPGKDGEPGLDG 610
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G RG KG + GE+G KG G +G KG + G+ G G D
Sbjct: 611 FP-GPRGEKG-DLGEKGEKGF-RGVKGEKG-EPGQPGLDGLD 648
Score = 104 (41.7 bits), Expect = 0.00011, P = 0.00011
Identities = 38/100 (38%), Positives = 48/100 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSS--DEGERGMKGSDEGERGMKGSDEGE 62
G +GE G G+ G+ + G KGE + D GE G KG D GE+G GS
Sbjct: 255 GMDGQKGEPGSPGA-AGQSGLPGP-KGEPGKEGEKGDAGENGPKG-DTGEKGDPGSSAA- 310
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G+KG E GE G G +GE G G G G KG ++
Sbjct: 311 -GIKG-EPGESGRPGQ-KGEPGLPGLP-GLPGIKGEPGFI 346
Score = 100 (40.3 bits), Expect = 0.00030, P = 0.00030
Identities = 36/102 (35%), Positives = 47/102 (46%)
Query: 3 GK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD-- 59
GK G GE G KG D G+ GS + + G G KG + G G+ G
Sbjct: 282 GKEGEKGDAGENGPKG-DTGEKGDPGSSAAGIKGEPGESGRPGQKG-EPGLPGLPGLPGI 339
Query: 60 EGERGMKGSEEGERGMKG--SDEGERGTKGSD-EGERGTKGS 98
+GE G G + GE G+ G +G+RG G GERG G+
Sbjct: 340 KGEPGFIGPQ-GEPGLPGLPGTKGDRGEAGPPGRGERGDPGA 380
>UNIPROTKB|P15989 [details] [associations]
symbol:COL6A3 "Collagen alpha-3(VI) chain" species:9031
"Gallus gallus" [GO:0004867 "serine-type endopeptidase inhibitor
activity" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00060 SMART:SM00131 SMART:SM00327 GO:GO:0004867
SUPFAM:SSF49265 GO:GO:0007155 Gene3D:4.10.410.10 InterPro:IPR020901
SUPFAM:SSF57362 PROSITE:PS00280 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 KO:K06238 EMBL:M24282 IPI:IPI00575769 PIR:A37797
RefSeq:NP_990865.1 UniGene:Gga.888 ProteinModelPortal:P15989
SMR:P15989 STRING:P15989 PRIDE:P15989 GeneID:396548 KEGG:gga:396548
CTD:1293 eggNOG:NOG237718 HOGENOM:HOG000168250 HOVERGEN:HBG051052
InParanoid:P15989 OrthoDB:EOG4HT8R9 NextBio:20816584 Uniprot:P15989
Length = 3137
Score = 121 (47.7 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 33/91 (36%), Positives = 50/91 (54%)
Query: 11 GERGMKGSD--EGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
GE G+ G D EG + G +KG + + +G +G +G + G+RG++G D GE G
Sbjct: 2112 GEMGLDGIDGEEGDKGLPGFSGEKG-FSGRRGSKGAKGERG-ERGDRGLRG-DPGESGAD 2168
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
++ G RG KG + G+ G G G+RG G
Sbjct: 2169 NTQRGTRGQKG-EIGQMGEPGP-AGQRGQDG 2197
Score = 116 (45.9 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/103 (36%), Positives = 52/103 (50%)
Query: 10 EGERGMKG-SDE----GKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
EG++G+ G S E G+ KG+ KGE + G+RG++G D GE G + G RG
Sbjct: 2123 EGDKGLPGFSGEKGFSGRRGSKGA-KGE----RGERGDRGLRG-DPGESGADNTQRGTRG 2176
Query: 65 MKGS-----EEGERGMKGSDEG--ERGTKG--SDEGERGTKGS 98
KG E G G +G D G +G G G +GTKG+
Sbjct: 2177 QKGEIGQMGEPGPAGQRGQDGGVGRKGMAGRRGPIGVKGTKGA 2219
Score = 115 (45.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/103 (35%), Positives = 51/103 (49%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG S G +G KG + G ++G D GE ++ G RG KG + G+ G G G
Sbjct: 2135 KGFSGRRGSKGAKGERGERGDRGLRG-DPGESGADNTQRGTRGQKG-EIGQMGEPGP-AG 2191
Query: 62 ERGMKGSEEGERGMKG--SDEGERGTKGS-----DEGERGTKG 97
+RG G G +GM G G +GTKG+ GE+G +G
Sbjct: 2192 QRGQDGGV-GRKGMAGRRGPIGVKGTKGALGQPGPAGEQGMRG 2233
Score = 107 (42.7 bits), Expect = 0.00030, P = 0.00030
Identities = 36/91 (39%), Positives = 42/91 (46%)
Query: 7 SVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
S G+RG+ G K G Y GERG G + G +G +G G RG K
Sbjct: 2042 SGQRGDRGLPGPIGPKGATGEIGYGGYPGDEGGPGERGPPGVN-GTQGFQGCP-GHRGTK 2099
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GS G G KG + GE G G D GE G KG
Sbjct: 2100 GSR-GFPGEKG-ELGEMGLDGID-GEEGDKG 2127
>MGI|MGI:1932395 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10090 "Mus
musculus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IEA]
InterPro:IPR007794 Pfam:PF05104 MGI:MGI:1932395 GO:GO:0007165
GO:GO:0015031 GO:GO:0030176 eggNOG:COG5651 CTD:6238
HOVERGEN:HBG061483 KO:K14000 ChiTaRS:RRBP1 EMBL:AF273683
EMBL:AF273684 EMBL:AF273685 EMBL:AF273686 EMBL:AF273687
EMBL:AF273688 EMBL:AF273689 EMBL:AF273690 EMBL:AF273691
EMBL:AF273692 EMBL:AF273693 EMBL:AL929550 EMBL:BC031452
EMBL:AK019964 IPI:IPI00121149 IPI:IPI00226199 IPI:IPI00226200
IPI:IPI00226201 IPI:IPI00230457 IPI:IPI00230458 IPI:IPI00230459
IPI:IPI00230462 IPI:IPI00230463 IPI:IPI00230464 IPI:IPI00230465
IPI:IPI00986807 RefSeq:NP_077243.2 RefSeq:NP_598329.1
UniGene:Mm.13705 ProteinModelPortal:Q99PL5 SMR:Q99PL5 STRING:Q99PL5
PhosphoSite:Q99PL5 PaxDb:Q99PL5 PRIDE:Q99PL5
Ensembl:ENSMUST00000037875 GeneID:81910 KEGG:mmu:81910
UCSC:uc008mqk.1 UCSC:uc008mql.1 UCSC:uc008mqm.1
GeneTree:ENSGT00530000063895 NextBio:350489 Bgee:Q99PL5
CleanEx:MM_RRBP1 Genevestigator:Q99PL5 Uniprot:Q99PL5
Length = 1605
Score = 118 (46.6 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 20/93 (21%), Positives = 54/93 (58%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G + K + ++G+ +S++G++G ++G++G ++G
Sbjct: 552 KGEGPQ-NQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQG 610
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
++G +G++G ++G++G ++G++G
Sbjct: 611 KKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKG 643
Score = 108 (43.1 bits), Expect = 0.00012, P = 0.00012
Identities = 19/93 (20%), Positives = 53/93 (56%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G ++GK ++G+ + ++G++G ++G++G ++G
Sbjct: 602 KGEGAQ-NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 660
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
++G + ++G ++G++G ++G++G
Sbjct: 661 KKGEGPQNQAKKGEGAQNQGKKGEGAQNQGKKG 693
Score = 108 (43.1 bits), Expect = 0.00012, P = 0.00012
Identities = 19/93 (20%), Positives = 53/93 (56%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G ++GK ++G+ + ++G++G ++G++G ++G
Sbjct: 592 KGEGAQ-NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 650
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
++G +G++G ++ ++G ++G++G
Sbjct: 651 KKGEGAQNQGKKGEGPQNQAKKGEGAQNQGKKG 683
Score = 104 (41.7 bits), Expect = 0.00031, P = 0.00031
Identities = 19/93 (20%), Positives = 53/93 (56%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
K +G S ++G++G ++GK ++G+ + ++G++G ++G++G ++G
Sbjct: 582 KPEGTS-NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 640
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
++G +G++G ++G++G ++ ++G
Sbjct: 641 KKGEGAQNQGKKGEGAQNQGKKGEGPQNQAKKG 673
Score = 102 (41.0 bits), Expect = 0.00050, P = 0.00050
Identities = 17/86 (19%), Positives = 50/86 (58%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
++G++ S++GK ++G+ + ++G++G ++G++G ++G++G
Sbjct: 578 NQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQ 637
Query: 69 EEGERGMKGSDEGERGTKGSDEGERG 94
+G++G ++G++G ++G++G
Sbjct: 638 NQGKKGEGAQNQGKKGEGAQNQGKKG 663
Score = 102 (41.0 bits), Expect = 0.00050, P = 0.00050
Identities = 18/92 (19%), Positives = 52/92 (56%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G ++GK ++G+ + ++G++G ++G++G ++
Sbjct: 612 KGEGAQ-NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGPQNQA 670
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGER 93
++G +G++G ++G++G ++G++
Sbjct: 671 KKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKK 702
Score = 100 (40.3 bits), Expect = 0.00082, P = 0.00082
Identities = 17/93 (18%), Positives = 51/93 (54%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G + K + ++G+ +S++G++G ++G++G ++
Sbjct: 411 KGEGPQ-NQGKKGEAAQKQDKKIEGAQNQGKKPEGTSNQGKKGEGAQNQGKKGEGAQNQS 469
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
++G + ++G G ++ ++G ++ ++G
Sbjct: 470 KKGEGAQNQAKKGEGGQNQAKKGEGAQNQAKKG 502
>UNIPROTKB|G4MSR4 [details] [associations]
symbol:MGG_07099 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0043581 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_003715292.1 EnsemblFungi:MGG_07099T0
GeneID:2682984 KEGG:mgr:MGG_07099 Uniprot:G4MSR4
Length = 717
Score = 114 (45.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 39/100 (39%), Positives = 46/100 (46%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMK---GSD 59
G GR G+RG G D G G D+G + D G RG G D G G+ G D
Sbjct: 621 GGGRGFG-GDRGSFGVDRGF----GGDRGGRGF-AGDRGGRGF-GGDRGSFGVDRGFGGD 673
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G RG G + G RG G D G R G + G+RG G D
Sbjct: 674 RGGRGFAG-DRGGRGF-GGDRGGR-VFGGNRGDRGGFGGD 710
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 29/77 (37%), Positives = 39/77 (50%)
Query: 21 GKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDE 80
G Y + G + G + S DE G +G G+RG G D G RG G +G G +G
Sbjct: 570 GLYNVPGVNIGTPMTYSIDERGGGGRGFG-GDRGGFGGDRGGRGFGGDRDGFGGGRGFG- 627
Query: 81 GERGTKGSDEGERGTKG 97
G+RG+ G D G G +G
Sbjct: 628 GDRGSFGVDRGFGGDRG 644
Score = 103 (41.3 bits), Expect = 0.00016, P = 0.00016
Identities = 36/100 (36%), Positives = 48/100 (48%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEG---ERGMKGSD 59
G GR G+RG G D G G D+ + G+RG G D G +RG +G
Sbjct: 592 GGGRGFG-GDRGGFGGDRGGRGF-GGDRDGFGGGRGFGGDRGSFGVDRGFGGDRGGRGF- 648
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G+RG +G G+RG G D G G +G G+RG +G
Sbjct: 649 AGDRGGRGFG-GDRGSFGVDRGFGGDRGGRGFAGDRGGRG 687
>UNIPROTKB|Q17RW2 [details] [associations]
symbol:COL24A1 "Collagen alpha-1(XXIV) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Reactome:REACT_118779 GO:GO:0005576 GO:GO:0030198
EMBL:CH471097 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
PROSITE:PS50025 EMBL:AC099561 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 KO:K06236 SMART:SM00210 EMBL:AY244357
EMBL:AL356059 EMBL:AC104455 EMBL:AL359971 EMBL:AL445427
EMBL:BC113654 EMBL:BC117170 EMBL:AB209686 IPI:IPI00168920
IPI:IPI00878900 RefSeq:NP_690850.2 UniGene:Hs.659516
ProteinModelPortal:Q17RW2 STRING:Q17RW2 PhosphoSite:Q17RW2
DMDM:290457636 PaxDb:Q17RW2 PRIDE:Q17RW2 Ensembl:ENST00000370571
Ensembl:ENST00000436319 GeneID:255631 KEGG:hsa:255631
UCSC:uc001dlj.3 CTD:255631 GeneCards:GC01M086194 H-InvDB:HIX0018170
HGNC:HGNC:20821 HPA:HPA038423 MIM:610025 neXtProt:NX_Q17RW2
PharmGKB:PA134932695 HOVERGEN:HBG098141 InParanoid:Q17RW2
OMA:FPGDFGD OrthoDB:EOG4WQ11P PhylomeDB:Q17RW2 GenomeRNAi:255631
NextBio:92614 ArrayExpress:Q17RW2 Bgee:Q17RW2 CleanEx:HS_COL24A1
Genevestigator:Q17RW2 Uniprot:Q17RW2
Length = 1714
Score = 118 (46.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/89 (39%), Positives = 55/89 (61%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GE+G++G+ +G+ +G +G + + K+ + GERG +G G +G+ GS G+RG+ G
Sbjct: 936 GEQGIQGA-KGEKGDQGK-RGPHGLIGKTGNPGERGFQGKP-GLQGLPGST-GDRGLPG- 990
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
E G RG++G D G G G EG GT+G
Sbjct: 991 EPGLRGLQG-DVGPPGEMGM-EGPPGTEG 1017
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 35/95 (36%), Positives = 53/95 (55%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVM-KSSDEGERGMKGSDEGERGMKG-----SDEGE 62
H G RG GS +G +GS + ++ + +G +G KG D+G+RG G + GE
Sbjct: 910 HVGARGPPGS-QGPKGQRGSRGPDGLLGEQGIQGAKGEKG-DQGKRGPHGLIGKTGNPGE 967
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
RG +G + G +G+ GS G+RG G + G RG +G
Sbjct: 968 RGFQG-KPGLQGLPGST-GDRGLPG-EPGLRGLQG 999
Score = 111 (44.1 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 37/105 (35%), Positives = 54/105 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKG--SDE 60
G++ + GERG +G G + GS G+ + + G RG++G GE GM+G E
Sbjct: 960 GKTGNPGERGFQGKP-GLQGLPGST-GDRGLPG-EPGLRGLQGDVGPPGEMGMEGPPGTE 1016
Query: 61 GERGMKGSE--EGERGMKGS--DEGERGTKGSD--EGERGTKGSD 99
GE G++G +G+ G GS GE G +G GE G +G D
Sbjct: 1017 GESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKD 1061
Score = 109 (43.4 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 40/113 (35%), Positives = 54/113 (47%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--S 58
KG KG+ GE G +G GK + K KG + + G G+ G D GE G+ G
Sbjct: 1118 KGDKGQIGPTGEVGSRGPP-GK-IGKSGPKGARGTRGA-VGHLGLMGPD-GEPGIPGYRG 1173
Query: 59 DEGERGMKG--SEEGERGMKGSDE------GERGTKG--SDEGERGTKGSDDY 101
+G+ G G +GE+G G D G RG G D+GERG G++ Y
Sbjct: 1174 HQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGY 1226
Score = 104 (41.7 bits), Expect = 0.00033, P = 0.00033
Identities = 36/102 (35%), Positives = 51/102 (50%)
Query: 11 GERGMKGSDEGKYVMKGS--DKGEYVMKS--SDEGERGMKGSD--EGERGMKGS--DEGE 62
G+RG+ G + G ++G GE M+ EGE G++G +G+ G GS GE
Sbjct: 984 GDRGLPG-EPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGE 1042
Query: 63 RGMKGSE--EGERGMKGSD-----EGERGTKGSDEGERGTKG 97
G++G GE G++G D G RG G D GE+G G
Sbjct: 1043 PGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGED-GEKGEMG 1083
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 38/109 (34%), Positives = 52/109 (47%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSD-----KGEYVMKSS--DEGERGMKG--SDEGE 52
KG + G G+KG D+G G GE M S ++GERG G +GE
Sbjct: 827 KGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGE 886
Query: 53 RGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
+G+ G G G+ G G G+ G G RG GS +G+RG++G D
Sbjct: 887 KGVMGYP-GPPGVPGPI-GPLGLPGH-VGARGPPGSQGPKGQRGSRGPD 932
>MGI|MGI:1309998 [details] [associations]
symbol:Marco "macrophage receptor with collagenous
structure" species:10090 "Mus musculus" [GO:0005044 "scavenger
receptor activity" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043277 "apoptotic cell clearance" evidence=IMP]
[GO:0045087 "innate immune response" evidence=IEA]
InterPro:IPR001190 InterPro:IPR017448 Pfam:PF00530 PRINTS:PR00258
PROSITE:PS00420 PROSITE:PS50287 SMART:SM00202 MGI:MGI:1309998
GO:GO:0016021 GO:GO:0045087 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005044 SUPFAM:SSF56487 GO:GO:0043277
HOVERGEN:HBG004933 CTD:8685 eggNOG:NOG297041 HOGENOM:HOG000085659
KO:K13884 OMA:WVRVSHE OrthoDB:EOG4DZ1VK EMBL:U18424 EMBL:AF128423
EMBL:AF127927 EMBL:AF127928 EMBL:AF128169 EMBL:AF128170
EMBL:AF128171 EMBL:AF127601 EMBL:AF127602 EMBL:AF128419
EMBL:AF128420 EMBL:AF128421 EMBL:AF128422 IPI:IPI00120227
PIR:A55840 RefSeq:NP_034896.1 UniGene:Mm.1856 PDB:2OY3 PDB:2OYA
PDBsum:2OY3 PDBsum:2OYA ProteinModelPortal:Q60754 SMR:Q60754
PhosphoSite:Q60754 PaxDb:Q60754 PRIDE:Q60754
Ensembl:ENSMUST00000027639 GeneID:17167 KEGG:mmu:17167
GeneTree:ENSGT00640000091447 InParanoid:Q60754
EvolutionaryTrace:Q60754 NextBio:291450 Bgee:Q60754
CleanEx:MM_MARCO Genevestigator:Q60754
GermOnline:ENSMUSG00000026390 Uniprot:Q60754
Length = 518
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/92 (41%), Positives = 53/92 (57%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G + + G G+KGS D G KG+ KGE S G G KG D G G+ G +GE
Sbjct: 336 GIAGNPGIAGVKGSKGDTGIQGQKGT-KGE----SGVPGLVGRKG-DTGSPGLAGP-KGE 388
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
G G ++G+ GMKGS G++G KG ++G++G
Sbjct: 389 PGRVG-QKGDPGMKGSS-GQQGQKG-EKGQKG 417
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSD-----EGERGMKGSDEGERGMK 56
KG G +G G+ G + G ++KGE D +G +G GS +GE G++
Sbjct: 149 KGERGSPGPKGAPGAP-GIPGLPGPAAEKGEKGAAGRDGTPGVQGPQGPPGS-KGEAGLQ 206
Query: 57 G--SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G++G G+ G RG KGS +G+ G G +GE GTKG
Sbjct: 207 GLTGAPGKQGATGAP-GPRGEKGS-KGDIGLTGP-KGEHGTKG 246
Score = 99 (39.9 bits), Expect = 0.00027, P = 0.00027
Identities = 37/106 (34%), Positives = 55/106 (51%)
Query: 1 MKGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
MKG G G +G KG D GK + G G +K D+G+ G++G +G G+ G
Sbjct: 262 MKGDTGPMGSPGAQGGKG-DAGKPGLPGL-AGSPGVKG-DQGKPGVQGVPGPQGAPGLSG 318
Query: 58 SDEGERGMKG--SEEGERGMKGSD--EGERGTKGSD--EGERGTKG 97
+ +GE G G G G+ G+ G +G+KG +G++GTKG
Sbjct: 319 A-KGEPGRTGLPGPAGPPGIAGNPGIAGVKGSKGDTGIQGQKGTKG 363
>UNIPROTKB|Q81Z75 [details] [associations]
symbol:BA_0397 "LPXTG-motif cell wall anchor domain
protein" species:1392 "Bacillus anthracis" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR InterPro:IPR019931 TIGRFAMs:TIGR01167
RefSeq:NP_842941.1 RefSeq:YP_017017.1 IntAct:Q81Z75 DNASU:1086799
EnsemblBacteria:EBBACT00000012475 EnsemblBacteria:EBBACT00000015525
GeneID:1086799 GeneID:2819864 KEGG:ban:BA_0397 KEGG:bar:GBAA_0397
PATRIC:18778350 OMA:RISMIKY ProtClustDB:CLSK917938
BioCyc:BANT261594:GJ7F-435-MONOMER Uniprot:Q81Z75
Length = 257
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/96 (31%), Positives = 38/96 (39%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G + G G S G G+ G SS GE G G+ G G + G
Sbjct: 95 GSGEN-GSGGNGSGSSGSGDNGSGGNGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGG 153
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G S GE G G+ G G+ G+ G G+ GS
Sbjct: 154 NGSGSSGSGENGSGGNGSGGNGSGGNSSGGSGSGGS 189
Score = 101 (40.6 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/88 (30%), Positives = 37/88 (42%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G G G+ G+ G+ G SS G+ G G+ G G S GE G G+
Sbjct: 87 GGNGSGGNGSGENGSGGNGSG-----SSGSGDNGSGGNGSGGNGSGSSGSGENGSGGNGS 141
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGS 98
G G + G G+ S GE G+ G+
Sbjct: 142 GSSGSGENGSGGNGSGSSGSGENGSGGN 169
Score = 100 (40.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/100 (31%), Positives = 42/100 (42%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G S GE G G+ G + G SS GE G G+ G G G+ G
Sbjct: 125 GSGSS-GSGENGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGGNGSGGNSSGG 183
Query: 63 RGMKGS-EEGERGMKG--SDEGERGTKGSDEGERGTKGSD 99
G GS +G +KG S +G G++G + + K D
Sbjct: 184 SGSGGSGSQGGNRVKGDSSSQGGNGSQGGNVKDNAKKQGD 223
Score = 93 (37.8 bits), Expect = 0.00040, P = 0.00040
Identities = 27/92 (29%), Positives = 37/92 (40%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G G S G+ G+ G + G G S GE G G+ G G G+
Sbjct: 122 GGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGGNGSGGNSS 181
Query: 71 GERGMKGS-DEGERGTKG--SDEGERGTKGSD 99
G G GS +G KG S +G G++G +
Sbjct: 182 GGSGSGGSGSQGGNRVKGDSSSQGGNGSQGGN 213
Score = 90 (36.7 bits), Expect = 0.00087, P = 0.00087
Identities = 27/90 (30%), Positives = 36/90 (40%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG-----SDEGERGM 65
G + GSD GS G+ + G G G+ GE G G S G+ G
Sbjct: 59 GSQDDSGSDGNG--SDGSGSGDNGSGDNGSGGNGSGGNGSGENGSGGNGSGSSGSGDNGS 116
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGT 95
G+ G G S GE G+ G+ G G+
Sbjct: 117 GGNGSGGNGSGSSGSGENGSGGNGSGSSGS 146
>TIGR_CMR|BA_0397 [details] [associations]
symbol:BA_0397 "LPXTG-motif cell wall anchor domain
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR InterPro:IPR019931 TIGRFAMs:TIGR01167
RefSeq:NP_842941.1 RefSeq:YP_017017.1 IntAct:Q81Z75 DNASU:1086799
EnsemblBacteria:EBBACT00000012475 EnsemblBacteria:EBBACT00000015525
GeneID:1086799 GeneID:2819864 KEGG:ban:BA_0397 KEGG:bar:GBAA_0397
PATRIC:18778350 OMA:RISMIKY ProtClustDB:CLSK917938
BioCyc:BANT261594:GJ7F-435-MONOMER Uniprot:Q81Z75
Length = 257
Score = 107 (42.7 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 30/96 (31%), Positives = 38/96 (39%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G + G G S G G+ G SS GE G G+ G G + G
Sbjct: 95 GSGEN-GSGGNGSGSSGSGDNGSGGNGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGG 153
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G S GE G G+ G G+ G+ G G+ GS
Sbjct: 154 NGSGSSGSGENGSGGNGSGGNGSGGNSSGGSGSGGS 189
Score = 101 (40.6 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 27/88 (30%), Positives = 37/88 (42%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G G G+ G+ G+ G SS G+ G G+ G G S GE G G+
Sbjct: 87 GGNGSGGNGSGENGSGGNGSG-----SSGSGDNGSGGNGSGGNGSGSSGSGENGSGGNGS 141
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGS 98
G G + G G+ S GE G+ G+
Sbjct: 142 GSSGSGENGSGGNGSGSSGSGENGSGGN 169
Score = 100 (40.3 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 31/100 (31%), Positives = 42/100 (42%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G S GE G G+ G + G SS GE G G+ G G G+ G
Sbjct: 125 GSGSS-GSGENGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGGNGSGGNSSGG 183
Query: 63 RGMKGS-EEGERGMKG--SDEGERGTKGSDEGERGTKGSD 99
G GS +G +KG S +G G++G + + K D
Sbjct: 184 SGSGGSGSQGGNRVKGDSSSQGGNGSQGGNVKDNAKKQGD 223
Score = 93 (37.8 bits), Expect = 0.00040, P = 0.00040
Identities = 27/92 (29%), Positives = 37/92 (40%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G G S G+ G+ G + G G S GE G G+ G G G+
Sbjct: 122 GGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGSSGSGENGSGGNGSGGNGSGGNSS 181
Query: 71 GERGMKGS-DEGERGTKG--SDEGERGTKGSD 99
G G GS +G KG S +G G++G +
Sbjct: 182 GGSGSGGSGSQGGNRVKGDSSSQGGNGSQGGN 213
Score = 90 (36.7 bits), Expect = 0.00087, P = 0.00087
Identities = 27/90 (30%), Positives = 36/90 (40%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG-----SDEGERGM 65
G + GSD GS G+ + G G G+ GE G G S G+ G
Sbjct: 59 GSQDDSGSDGNG--SDGSGSGDNGSGDNGSGGNGSGGNGSGENGSGGNGSGSSGSGDNGS 116
Query: 66 KGSEEGERGMKGSDEGERGTKGSDEGERGT 95
G+ G G S GE G+ G+ G G+
Sbjct: 117 GGNGSGGNGSGSSGSGENGSGGNGSGSSGS 146
>UNIPROTKB|Q96P44 [details] [associations]
symbol:COL21A1 "Collagen alpha-1(XXI) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] [GO:0031012 "extracellular matrix"
evidence=IDA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 Reactome:REACT_118779 GO:GO:0005576 GO:GO:0030198
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025
SMART:SM00210 EMBL:AF414088 EMBL:AF330693 EMBL:AF438327
EMBL:AL136624 EMBL:AF370383 EMBL:AK313398 EMBL:AL513530
EMBL:AL031782 EMBL:AL034452 EMBL:BC045597 EMBL:BC126108
IPI:IPI00102435 IPI:IPI00435960 IPI:IPI00644733 RefSeq:NP_110447.2
UniGene:Hs.47629 HSSP:P18614 ProteinModelPortal:Q96P44 SMR:Q96P44
STRING:Q96P44 DMDM:74752071 PaxDb:Q96P44 PRIDE:Q96P44
Ensembl:ENST00000244728 Ensembl:ENST00000370808
Ensembl:ENST00000370819 GeneID:81578 KEGG:hsa:81578 UCSC:uc003pcs.3
UCSC:uc003pcu.1 UCSC:uc010jzz.3 CTD:81578 GeneCards:GC06M055968
HGNC:HGNC:17025 HPA:HPA031210 HPA:HPA031212 HPA:HPA031213
MIM:610002 neXtProt:NX_Q96P44 PharmGKB:PA26714 HOVERGEN:HBG106599
InParanoid:Q96P44 KO:K16629 OMA:NGRQGIP OrthoDB:EOG4KH2TF
GenomeRNAi:81578 NextBio:71896 ArrayExpress:Q96P44 Bgee:Q96P44
CleanEx:HS_COL21A1 Genevestigator:Q96P44 Uniprot:Q96P44
Length = 957
Score = 115 (45.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 37/96 (38%), Positives = 55/96 (57%)
Query: 5 GRSVHEGERGMKGSD-EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
G S +GE G GS E Y+ +G+ K + +GE+G++G +GE G +G G++
Sbjct: 668 GASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGN-QGEKGIQGQ-KGENGRQGIP-GQQ 724
Query: 64 GMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
G++G +GERG KG + G RG GS +GE G G
Sbjct: 725 GIQGHHGAKGERGEKG-EPGVRGAIGS-KGESGVDG 758
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 40/101 (39%), Positives = 51/101 (50%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG+ GR +G+RG+ G G + M GS KGE K D+G G G +G +G KG+
Sbjct: 505 KGEPGRDGDKGDRGLPGFP-GLHGMPGS-KGEMGAKG-DKGSPGFYGK-KGAKGEKGN-A 559
Query: 61 GERGMKGSEEGERGMKGSDE--GERGTKGSDEGERGTKGSD 99
G G+ G GE G G D G G KG + G G G D
Sbjct: 560 GFPGLPGPA-GEPGRHGKDGLMGSPGFKG-EAGSPGAPGQD 598
Score = 111 (44.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 36/105 (34%), Positives = 56/105 (53%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
KG ++GE+G++G + G+ + G +G + K GERG KG + G RG GS
Sbjct: 697 KGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAK----GERGEKG-EPGVRGAIGS- 750
Query: 60 EGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
+GE G+ G G +G G D G +G G D G+ G + S+ ++
Sbjct: 751 KGESGVDGLMGPAGPKGQPG-DPGPQGPPGLD-GKPGREFSEQFI 793
Score = 100 (40.3 bits), Expect = 0.00046, P = 0.00046
Identities = 37/98 (37%), Positives = 49/98 (50%)
Query: 11 GERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G G+ GS +G + G KGE + D+G+RG+ G G GM GS +GE G KG
Sbjct: 485 GTPGVPGSPGIQGARGLPGY-KGE-PGRDGDKGDRGLPGFP-GLHGMPGS-KGEMGAKGD 540
Query: 69 E--EGERGMKGSDEGERGTKG-----SDEGERGTKGSD 99
+ G G KG+ +GE+G G GE G G D
Sbjct: 541 KGSPGFYGKKGA-KGEKGNAGFPGLPGPAGEPGRHGKD 577
>ZFIN|ZDB-GENE-030616-13 [details] [associations]
symbol:col5a2a "collagen, type V, alpha 2a"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093
Pfam:PF01410 ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184
PROSITE:PS51461 SMART:SM00038 SMART:SM00214 ZFIN:ZDB-GENE-030616-13
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201
HOGENOM:HOG000085654 HOVERGEN:HBG004933 EMBL:AL731564
IPI:IPI00618461 UniGene:Dr.75905 STRING:Q8AW11 ArrayExpress:Q8AW11
Uniprot:Q8AW11
Length = 1258
Score = 116 (45.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/100 (36%), Positives = 52/100 (52%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVM-KSSDEGERGMKGSD--EGERGMKGSD 59
GKG H+G G+KG + G KG+ G+ M K G G+ G+ G GMKG
Sbjct: 178 GKG---HQGPDGLKG-ERGALGSKGTRGGQGNMGKPGPMGPMGINGAPGYPGSPGMKGQP 233
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G G++G E G +G +G + G +G G G++G G+D
Sbjct: 234 -GPTGVRGPE-GPQGQRG-ETGHQGRSGPT-GQQGPMGTD 269
Score = 108 (43.1 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 40/97 (41%), Positives = 50/97 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEG 61
+GRS G++G G+D G GS KG D G G KG +GE G GS +G
Sbjct: 254 QGRSGPTGQQGPMGTDGGP----GS-KGPV----GDLGVAGFKGEAGPKGEPGPPGS-QG 303
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G +G EEG+RG +G D G G G GERG G+
Sbjct: 304 VLGPQG-EEGKRGPRG-DPGSIGPPGP-VGERGAPGN 337
Score = 101 (40.6 bits), Expect = 0.00049, P = 0.00049
Identities = 33/93 (35%), Positives = 49/93 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVM-KSSDEGERGMKGSDEGERGMKGSDEGERGMKGS- 68
G G KG + G G + V+ +EG+RG +G D G G G GERG G+
Sbjct: 282 GVAGFKG-EAGPKGEPGPPGSQGVLGPQGEEGKRGPRG-DPGSIGPPGP-VGERGAPGNR 338
Query: 69 ----EEGERGMKGSDEGERGTKGSDEGERGTKG 97
++G +G KG+ +G+RGT G+ G +G+ G
Sbjct: 339 GFPGQDGLQGPKGA-QGDRGTSGTS-GPKGSTG 369
Score = 99 (39.9 bits), Expect = 0.00080, P = 0.00080
Identities = 34/91 (37%), Positives = 48/91 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
GERG +G G + +G GE G+ G +GS G G G+ +G G++G
Sbjct: 474 GERGEQGPP-GMHGFQGIP-GE----GGPVGQIGPRGSP-GPTGTLGN-QGPPGLQGMP- 524
Query: 71 GERGMKG--SDEGERGTKGSDEGERGTKGSD 99
GERG+ G +G+RG G ++G GT GSD
Sbjct: 525 GERGISGPPGPKGDRGAIG-EKGSEGTPGSD 554
>UNIPROTKB|F1RLM1 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0005587 "collagen type IV" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 GO:GO:0007528 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
GO:GO:0005587 Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772
OMA:FAPTGEK EMBL:CT954227 EMBL:AEMK01179141 EMBL:CT954225
Ensembl:ENSSSCT00000010462 Uniprot:F1RLM1
Length = 1625
Score = 117 (46.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 42/109 (38%), Positives = 51/109 (46%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+K KG +GE+G KG + G M G +KGE G RG G D GE+G KGS
Sbjct: 204 VKEKGDFATKGEKGQKG-EPGFQGMPGIGEKGE----PGKPGPRGKPGKD-GEKGEKGSP 257
Query: 60 --EGERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKGSDDY 101
G+ G G G G+KG D+GE G G G G KG Y
Sbjct: 258 GFPGDSGYPGLP-GREGLKG-DKGEAGPPGPPGTVIGPGLLGEKGERGY 304
>UNIPROTKB|G1RSL2 [details] [associations]
symbol:COL4A4 "Uncharacterized protein" species:61853
"Nomascus leucogenys" [GO:0005201 "extracellular matrix structural
constituent" evidence=ISS] [GO:0005587 "collagen type IV"
evidence=ISS] [GO:0005605 "basal lamina" evidence=ISS] [GO:0032836
"glomerular basement membrane development" evidence=ISS]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005605 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 GO:GO:0032836 OMA:FRGDMGD
EMBL:ADFV01083072 EMBL:ADFV01083073 EMBL:ADFV01083074
EMBL:ADFV01083075 EMBL:ADFV01083076 EMBL:ADFV01083077
EMBL:ADFV01083078 Ensembl:ENSNLET00000017067 Uniprot:G1RSL2
Length = 1690
Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/94 (43%), Positives = 52/94 (55%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGM---KG 67
GERG G+D G KG + GE M S G+RG++G+ +G G G DEGE + KG
Sbjct: 917 GERGKPGAD-GCPGTKG-EPGEKGM-SGLPGDRGLRGA-KGATGPPG-DEGEMAIISIKG 971
Query: 68 SEEGERGMKGSD--EGERGTKGSD--EGERGTKG 97
+ GE G G D GERG KG+ +G RG G
Sbjct: 972 -KPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPG 1004
Score = 114 (45.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 40/101 (39%), Positives = 50/101 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKGSD--EGERGMKGSD 59
KG S G+RG++G+ +G G D+GE + S GE G G D GERG KG+
Sbjct: 937 KGMSGLPGDRGLRGA-KGATGPPG-DEGEMAIISIKGKPGEPGPPGDDGFPGERGDKGTP 994
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G +G +G E G G G GE G KG G G GS
Sbjct: 995 -GMQGRRG-EPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGS 1033
>UNIPROTKB|G7PK77 [details] [associations]
symbol:EGM_04376 "Putative uncharacterized protein"
species:9541 "Macaca fascicularis" [GO:0005201 "extracellular
matrix structural constituent" evidence=ISS] [GO:0005587 "collagen
type IV" evidence=ISS] [GO:0005605 "basal lamina" evidence=ISS]
[GO:0032836 "glomerular basement membrane development"
evidence=ISS] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005605
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 GO:GO:0005587
Gene3D:2.170.240.10 GO:GO:0032836 EMBL:CM001287 Uniprot:G7PK77
Length = 1695
Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 41/107 (38%), Positives = 49/107 (45%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGS-----DKGEY--VMKSSDEGERGMKGSD--EGER 53
G GE+GM G D+G KG+ D+GE + K GE G G D GER
Sbjct: 930 GTKGEPGEKGMSGFPGDQGVRGAKGAIGPPGDEGEMAIISKKGKPGEPGPPGDDGFPGER 989
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G KG+ G +G +G E G G G GE G KG G G GS
Sbjct: 990 GDKGTP-GMQGRRG-EPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGS 1034
>UNIPROTKB|F1NQ20 [details] [associations]
symbol:COL9A1 "Collagen alpha-1(IX) chain" species:9031
"Gallus gallus" [GO:0001894 "tissue homeostasis" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0005594 "collagen type IX" evidence=IEA] InterPro:IPR008985
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00210 OMA:GFCEPAS GO:GO:0005594
GeneTree:ENSGT00700000104194 EMBL:AADN02002545 EMBL:AADN02002546
EMBL:AADN02002547 EMBL:AADN02002548 EMBL:AADN02002549
IPI:IPI00820643 Ensembl:ENSGALT00000037052 ArrayExpress:F1NQ20
Uniprot:F1NQ20
Length = 933
Score = 114 (45.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 36/100 (36%), Positives = 54/100 (54%)
Query: 2 KG-KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSD-EGERGMKGSDEGERGMKG 57
KG KG S G++G KG D+G G+ ++ G G KG+ +G RG+ G
Sbjct: 443 KGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGITGPKGN-KGARGLDG 501
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
D G +G+ G+ G++G +G GE G KG + G +GT+G
Sbjct: 502 -DPGPQGLPGAP-GDQGQRGP-VGEEGPKG-ERGPQGTRG 537
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/106 (36%), Positives = 53/106 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDE 60
GKG GE G KG ++G +G D GE D G G KGS + G+ G +G E
Sbjct: 673 GKGDRGSAGEPGPKG-EQGAPGSEG-DAGEKG-DLGDMGLPGAKGSVGNPGDPGSRGP-E 728
Query: 61 GERGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGSDDYV 102
G RG+ G E G RG G +GE+G G +G G + +D ++
Sbjct: 729 GSRGLPGME-GPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHI 773
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 35/107 (32%), Positives = 52/107 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDE-----GERGMKG-- 57
GR H G GMKG K K Y + D+G G G+ G RG+ G
Sbjct: 429 GRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPIGEVGAQGPPGILGIRGITGIT 488
Query: 58 SDEGERGMKG--SEEGERGMKGS--DEGERGTKGSD--EGERGTKGS 98
+G +G +G + G +G+ G+ D+G+RG G + +GERG +G+
Sbjct: 489 GPKGNKGARGLDGDPGPQGLPGAPGDQGQRGPVGEEGPKGERGPQGT 535
>ZFIN|ZDB-GENE-100119-1 [details] [associations]
symbol:col27a1a "collagen, type XXVII, alpha 1a"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0048570
"notochord morphogenesis" evidence=IGI;IMP] [GO:0030282 "bone
mineralization" evidence=IGI;IMP] [GO:0001501 "skeletal system
development" evidence=IGI;IMP] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
ZFIN:ZDB-GENE-100119-1 GO:GO:0046872 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001501
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0030282
GO:GO:0005201 HOGENOM:HOG000085654 KO:K06236 SMART:SM00210
EMBL:GQ229459 IPI:IPI00944314 RefSeq:NP_001156766.1
UniGene:Dr.134171 GeneID:100004688 KEGG:dre:100004688 CTD:100004688
NextBio:20786347 GO:GO:0048570 Uniprot:C7DZK3
Length = 1783
Score = 117 (46.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 38/99 (38%), Positives = 51/99 (51%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDEGERGMKG 67
+GE+G G EG G +G V K D GE G G +G G++G G G+ G
Sbjct: 1258 KGEQGDDGKVEGPTGAPGL-RGP-VGKRGDRGEPGDPGYVGQQGVDGLRGKP-GAPGLPG 1314
Query: 68 SE--EGERGMKGSDEGERGTKGSD--EGERGTKGSDDYV 102
G +G KGS +GE+G KG +GERG++GS V
Sbjct: 1315 DPGPRGTQGPKGS-KGEQGQKGKQGQQGERGSRGSPGVV 1352
Score = 100 (40.3 bits), Expect = 0.00092, P = 0.00092
Identities = 40/101 (39%), Positives = 53/101 (52%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG KG EGE+G++G D G +KG D G D G G++G EG+ G G +
Sbjct: 1132 KGEKGDMGTEGEQGVRG-DPG---IKGKD-GP----PGDPGLTGVRGP-EGKSGKSG-ER 1180
Query: 61 GERGMKGSEE--GERGMKGS--DEGERGTKGSDEGERGTKG 97
G+ G+KG++ G G GS G GT G +G RGT G
Sbjct: 1181 GKPGLKGAKGNIGHLGETGSVGKIGPIGTTGP-KGSRGTIG 1220
>RGD|1309172 [details] [associations]
symbol:Col6a6 "collagen, type VI, alpha 6" species:10116 "Rattus
norvegicus" [GO:0031012 "extracellular matrix" evidence=ISO]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
RGD:1309172 InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012 KO:K06238
GeneTree:ENSGT00530000063022 OrthoDB:EOG476JZ9 CTD:131873
IPI:IPI00778143 RefSeq:XP_236593.5 Ensembl:ENSRNOT00000056414
GeneID:315979 KEGG:rno:315979 UCSC:RGD:1309172 NextBio:670177
Uniprot:D3ZL10
Length = 2264
Score = 118 (46.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG +G S EGE G G D G +G D G + + G+ G +GS G+RG G D
Sbjct: 1447 KGARGLSGEEGEVGEDGLD-GLNGEQG-DSG-IPGRRGERGDAGSQGSP-GKRGASG-DR 1501
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G +G++G + G G S +G +G KG D G +G +G
Sbjct: 1502 GPKGLRG-DPGTPGRDNSIQGPKGLKG-DPGRQGRRG 1536
Score = 115 (45.5 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 38/100 (38%), Positives = 55/100 (55%)
Query: 10 EGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGS--DEGER 63
EG G+KG G+ KG +KG + MK +G G KG ++G G +GS + G+
Sbjct: 1574 EGSPGLKGPQGPRGEVGEKG-EKGGFGMKGP-QGPPGPKGRAGNQGHWGSQGSKGEPGDL 1631
Query: 64 GMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G KG+ G RG++G D+G G GS G +GTKG + +
Sbjct: 1632 GEKGAAGFPGPRGLQG-DDGSPGY-GSI-GRKGTKGQEGF 1668
Score = 114 (45.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 39/100 (39%), Positives = 50/100 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSD-- 59
KG + GE G+ G + G G KG K +G RG+ G +EGE G G D
Sbjct: 1411 KGSEGYLGEEGIAG-ERGALGPMGEQGTKGCLGAKGP-KGARGLSG-EEGEVGEDGLDGL 1467
Query: 60 EGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GE+G G GERG GS +G G +G+ G+RG KG
Sbjct: 1468 NGEQGDSGIPGRRGERGDAGS-QGSPGKRGAS-GDRGPKG 1505
Score = 114 (45.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 39/104 (37%), Positives = 50/104 (48%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGS 58
KG KG +G RG GS + V S +G G+ G D EG G+KG
Sbjct: 1523 KGLKGDPGRQGRRGWPGSPGTPGSRRKMSSHGLVGSLSSQGNPGITGPDGLEGSPGLKGP 1582
Query: 59 D--EGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
GE G KG E+G GMKG +G G KG ++G G++GS
Sbjct: 1583 QGPRGEVGEKG-EKGGFGMKGP-QGPPGPKGRAGNQGHWGSQGS 1624
Score = 111 (44.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 41/105 (39%), Positives = 53/105 (50%)
Query: 3 GKGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G G +G G KG ++G + +GS KGE D GE+G G G RG++G D+
Sbjct: 1597 GFGMKGPQGPPGPKGRAGNQGHWGSQGS-KGE----PGDLGEKGAAGFP-GPRGLQG-DD 1649
Query: 61 GERGMKGSEEGERGMKGSD--EGERGTKGS-----DEGERGTKGS 98
G G GS G +G KG + GE G KG D GE G KG+
Sbjct: 1650 GSPGY-GSI-GRKGTKGQEGFPGESGPKGDIGDPGDPGEAGPKGA 1692
>ZFIN|ZDB-GENE-070912-607 [details] [associations]
symbol:col11a1b "collagen, type XI, alpha 1b"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-070912-607
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 SMART:SM00210 GeneTree:ENSGT00700000104155
UniGene:Dr.3536 EMBL:BX510342 EMBL:BX547933 EMBL:CT583637
EMBL:GQ485665 IPI:IPI00511026 RefSeq:NP_001171883.1
UniGene:Dr.42128 Ensembl:ENSDART00000049589 GeneID:555202
KEGG:dre:555202 CTD:555202 NextBio:20880850 Uniprot:D6MUD3
Length = 1815
Score = 117 (46.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/109 (34%), Positives = 58/109 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKG--SD 59
+G + G RG+KG+ EG +KG +KGE +G+ G+KG D+GE G+ G +
Sbjct: 762 QGSIGYPGPRGVKGA-EGVRGLKGGKGEKGEDGFPGF-KGDMGLKG-DKGEVGVIGPRGE 818
Query: 60 EGERGMKGSE--EGERGMKGS--DEGERGTKGSD--EGERGTKGSDDYV 102
+G G KG GE G G+ ++G+ G G G +G KGS ++
Sbjct: 819 DGPEGPKGKSGPSGEAGPMGTAGEKGKLGVPGLPGYPGRQGPKGSTGFI 867
Score = 109 (43.4 bits), Expect = 0.00010, P = 0.00010
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--DEG 61
+GR+ +G RG+ G + G KG D+G + GE+G +G ++G G+ GS ++G
Sbjct: 588 RGRNGADGARGIPG-ESGA---KG-DRGFDGLPGLP-GEKGHRG-EQGPIGLPGSPGEDG 640
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
RG G E G+RGM G + G RG G G GT G
Sbjct: 641 PRGEDG-EIGQRGMPG-ESGPRGLLGP-RGSPGTAG 673
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 11 GERGMKGSDEGKYVMKGSDKGE-YVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
GE+G G +G + + G+D + K G++G G G +G G G RG+KG+E
Sbjct: 721 GEKGPAGK-QGLHGLAGADGPPGHPGKEGPPGDKGAAGQP-GPQGSIGYP-GPRGVKGAE 777
Query: 70 EGERGMKGSDEGERGTKGSD--EGERGTKG 97
G RG+KG +GE+G G +G+ G KG
Sbjct: 778 -GVRGLKGG-KGEKGEDGFPGFKGDMGLKG 805
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 38/103 (36%), Positives = 53/103 (51%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSD--EGERGMKGS 58
GKG +G G KG D G +KG DKGE + ++G G KG GE G G+
Sbjct: 785 GKGEKGEDGFPGFKG-DMG---LKG-DKGEVGVIGPRGEDGPEGPKGKSGPSGEAGPMGT 839
Query: 59 --DEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
++G+ G+ G G +G KGS G G G++ GE+G +G
Sbjct: 840 AGEKGKLGVPGLPGYPGRQGPKGST-GFIGFPGAN-GEKGGRG 880
Score = 100 (40.3 bits), Expect = 0.00094, P = 0.00094
Identities = 37/109 (33%), Positives = 51/109 (46%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKG-- 57
KG+S GE G G+ ++GK + G G Y + +G G G GE+G +G
Sbjct: 825 KGKSGPSGEAGPMGTAGEKGKLGVPGLP-G-YPGRQGPKGSTGFIGFPGANGEKGGRGIA 882
Query: 58 SDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD-----EGERGTKG 97
G RG +G G RG +G G +GT G+D GERG +G
Sbjct: 883 GKAGPRGQRGPTGPRGGRGARGPTGKPGAKGTSGNDGPSGGPGERGPQG 931
>UNIPROTKB|Q0II24 [details] [associations]
symbol:C1QTNF9 "Complement C1q and tumor necrosis
factor-related protein 9" species:9913 "Bos taurus" [GO:0005581
"collagen" evidence=IEA] InterPro:IPR008983
GeneTree:ENSGT00700000104099 HOGENOM:HOG000085653
HOVERGEN:HBG108220 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
EMBL:BC122841 IPI:IPI00707513 RefSeq:NP_001069314.1
UniGene:Bt.52883 ProteinModelPortal:Q0II24 PRIDE:Q0II24
Ensembl:ENSBTAT00000001799 GeneID:523616 KEGG:bta:523616 CTD:338872
eggNOG:NOG266951 InParanoid:Q0II24 OMA:GMRGWKG OrthoDB:EOG4D7Z64
NextBio:20873787 Uniprot:Q0II24
Length = 333
Score = 108 (43.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/101 (37%), Positives = 50/101 (49%)
Query: 2 KG-KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKS--SDEGERGMKGSDEGERGMK 56
KG KG + G G G D GK G+D G K D+G RG G G +G+
Sbjct: 49 KGDKGDAGEPGHPGGPGKDGMTGKKGEPGAD-GHVEAKGIKGDQGSRGPPGK-HGPKGLV 106
Query: 57 GSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G GE+G+ G E G +G KG ++G+ G G EG G+ G
Sbjct: 107 GPP-GEKGLTG-ETGPQGQKG-EKGDVGPVGP-EGPEGSTG 143
>UNIPROTKB|Q6ZMI3 [details] [associations]
symbol:GLDN "Gliomedin" species:9606 "Homo sapiens"
[GO:0005581 "collagen" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] InterPro:IPR003112 Pfam:PF02191
PROSITE:PS51132 SMART:SM00284 GO:GO:0016021 GO:GO:0005886
GO:GO:0005615 GO:GO:0007399 GO:GO:0030154 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 EMBL:AK172756 EMBL:BX538105
EMBL:AY358144 EMBL:BK001262 IPI:IPI00418531 IPI:IPI00743511
RefSeq:NP_861454.2 UniGene:Hs.526441 ProteinModelPortal:Q6ZMI3
STRING:Q6ZMI3 PhosphoSite:Q6ZMI3 DMDM:74749534 PaxDb:Q6ZMI3
PRIDE:Q6ZMI3 Ensembl:ENST00000335449 Ensembl:ENST00000396399
GeneID:342035 KEGG:hsa:342035 UCSC:uc002aba.3 CTD:342035
GeneCards:GC15P051633 HGNC:HGNC:29514 MIM:608603 neXtProt:NX_Q6ZMI3
PharmGKB:PA134882405 eggNOG:NOG298097 HOGENOM:HOG000112733
HOVERGEN:HBG081557 InParanoid:Q6ZMI3 KO:K16364 OMA:VTFAFDL
OrthoDB:EOG4THVTK GenomeRNAi:342035 NextBio:98223 Bgee:Q6ZMI3
CleanEx:HS_GLDN Genevestigator:Q6ZMI3 GermOnline:ENSG00000186417
Uniprot:Q6ZMI3
Length = 551
Score = 111 (44.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 34/88 (38%), Positives = 48/88 (54%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GE+G G GK + G+ + + GERG KG D GE G++G+ EG G KG E
Sbjct: 168 KGEKGANGK-RGKMGIPGA--------AGNPGERGEKG-DHGELGLQGN-EGPPGQKG-E 215
Query: 70 EGERGMKGSDEGERGTKGSDEGERGTKG 97
+G++G +D G KG D+G G G
Sbjct: 216 KGDKGDVSNDVLLAGAKG-DQGPPGPPG 242
Score = 105 (42.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDEGERGMKGS 68
G G+ G G KG +KG + G+ G+ G+ + GERG KG D GE G++G+
Sbjct: 154 GHNGLDGQP-GPQGPKG-EKGA----NGKRGKMGIPGAAGNPGERGEKG-DHGELGLQGN 206
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
E G G KG ++G++G +D G KG
Sbjct: 207 E-GPPGQKG-EKGDKGDVSNDVLLAGAKG 233
>UNIPROTKB|Q14050 [details] [associations]
symbol:COL9A3 "Collagen alpha-3(IX) chain" species:9606
"Homo sapiens" [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008585 "female gonad development" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0030198 "extracellular matrix organization"
evidence=TAS] [GO:0005594 "collagen type IX" evidence=IDA]
[GO:0030020 "extracellular matrix structural constituent conferring
tensile strength" evidence=IC] Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
GO:GO:0008585 GO:GO:0030198 GO:GO:0008584 GO:GO:0005788
HOGENOM:HOG000085653 InterPro:IPR008160 Pfam:PF01391 MIM:603932
HOVERGEN:HBG004933 GO:GO:0030020 Orphanet:166002 KO:K08131
GO:GO:0005594 eggNOG:NOG297550 OrthoDB:EOG43N7D8 EMBL:L41162
EMBL:AF026802 EMBL:AF026801 EMBL:AL035669 EMBL:BC011705 EMBL:X91013
IPI:IPI00289999 RefSeq:NP_001844.3 UniGene:Hs.716639
ProteinModelPortal:Q14050 IntAct:Q14050 STRING:Q14050
PhosphoSite:Q14050 DMDM:20137327 PaxDb:Q14050 PRIDE:Q14050
DNASU:1299 Ensembl:ENST00000343916 GeneID:1299 KEGG:hsa:1299
UCSC:uc002ydm.3 CTD:1299 GeneCards:GC20P061447 HGNC:HGNC:2219
HPA:HPA040125 MIM:120270 MIM:600969 neXtProt:NX_Q14050
PharmGKB:PA26735 InParanoid:Q14050 OMA:PAGSIGH PhylomeDB:Q14050
ChiTaRS:COL9A3 GenomeRNAi:1299 NextBio:5275 ArrayExpress:Q14050
Bgee:Q14050 CleanEx:HS_COL9A3 Genevestigator:Q14050
GermOnline:ENSG00000092758 Uniprot:Q14050
Length = 684
Score = 112 (44.5 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 38/94 (40%), Positives = 48/94 (51%)
Query: 11 GERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGERGMKGSDEGERGMK 66
GE GM G D G+ + G D KGE ++ GE+G G G G KG ++GERG
Sbjct: 298 GEPGMPGKD-GQNGVPGLDGQKGE-AGRNGAPGEKGPNGLPGLPGRAGSKG-EKGERGRA 354
Query: 67 GSEEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G E GE G G G+ G G + GE G +GS
Sbjct: 355 G-ELGEAGPSGEPGVPGDAGMPG-ERGEAGHRGS 386
Score = 99 (39.9 bits), Expect = 0.00039, P = 0.00039
Identities = 36/105 (34%), Positives = 55/105 (52%)
Query: 2 KG-KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS 58
KG +GR+ GE G G G M G ++GE + S G G +G G G++G
Sbjct: 348 KGERGRAGELGEAGPSGEPGVPGDAGMPG-ERGEAGHRGS-AGALGPQGPP-GAPGVRGF 404
Query: 59 DEGERGMKGSE--EGERGMKGSDEGERGTKGS--DEGERGTKGSD 99
+G++G G G +G++G D G+RG G+ +G++G GSD
Sbjct: 405 -QGQKGSMGDPGLPGPQGLRG-DVGDRGPGGAAGPKGDQGIAGSD 447
>UNIPROTKB|J3KNM7 [details] [associations]
symbol:COL4A4 "Collagen alpha-4(IV) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
EMBL:CH471063 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
EMBL:AC079235 EMBL:AC073149 UniGene:Hs.591645 HGNC:HGNC:2206
ChiTaRS:COL4A4 ProteinModelPortal:J3KNM7 Ensembl:ENST00000329662
Uniprot:J3KNM7
Length = 1687
Score = 116 (45.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/101 (38%), Positives = 50/101 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSD--EGERGMKGSD 59
KG S G+RG++G+ +G G D+GE + + GE G G D GERG KG+
Sbjct: 938 KGMSGLPGDRGLRGA-KGAIGPPG-DEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTP 995
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G +G +G E G G G GE G KG G G GS
Sbjct: 996 -GMQGRRG-EPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGS 1034
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 33/75 (44%), Positives = 40/75 (53%)
Query: 36 KSSDEGERGMKGSDEGERGMKG--SDEGERGMKGS-----EEGERGM---KGSDEGERGT 85
K EG G KG + GE+GM G D G RG KG+ +EGE + KG+ GE G
Sbjct: 922 KPGAEGCPGAKG-EPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEMAIISQKGTP-GEPGP 979
Query: 86 KGSD--EGERGTKGS 98
G D GERG KG+
Sbjct: 980 PGDDGFPGERGDKGT 994
>UNIPROTKB|P53420 [details] [associations]
symbol:COL4A4 "Collagen alpha-4(IV) chain" species:9606
"Homo sapiens" [GO:0005587 "collagen type IV" evidence=IDA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IMP] [GO:0032836 "glomerular basement membrane
development" evidence=IMP] [GO:0005605 "basal lamina" evidence=IDA]
[GO:0005576 "extracellular region" evidence=TAS] [GO:0005788
"endoplasmic reticulum lumen" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] InterPro:IPR001442 Pfam:PF01413
PROSITE:PS51403 SMART:SM00111 Reactome:REACT_118779
Reactome:REACT_111045 Reactome:REACT_111102 GO:GO:0007411
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005788 GO:GO:0005605
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201
HOVERGEN:HBG004933 HOGENOM:HOG000085652 GO:GO:0005587
Gene3D:2.170.240.10 KO:K06237 OrthoDB:EOG4XGZZF EMBL:AC079235
EMBL:AB008496 MIM:141200 MIM:203780 Orphanet:88919 Orphanet:97562
GO:GO:0032836 EMBL:X81053 EMBL:Y17397 EMBL:Y17398 EMBL:Y17399
EMBL:Y17400 EMBL:Y17401 EMBL:Y17402 EMBL:Y17403 EMBL:Y17404
EMBL:Y17405 EMBL:Y17406 EMBL:Y17407 EMBL:Y17408 EMBL:Y17409
EMBL:Y17410 EMBL:Y17411 EMBL:Y17412 EMBL:Y17413 EMBL:Y17427
EMBL:Y17426 EMBL:Y17414 EMBL:Y17415 EMBL:Y17416 EMBL:Y17417
EMBL:Y17418 EMBL:Y17419 EMBL:Y17420 EMBL:Y17443 EMBL:Y17442
EMBL:Y17441 EMBL:Y17440 EMBL:Y17439 EMBL:Y17438 EMBL:Y17437
EMBL:Y17436 EMBL:Y17435 EMBL:Y17434 EMBL:Y17433 EMBL:Y17432
EMBL:Y17431 EMBL:Y17430 EMBL:Y17429 EMBL:Y17428 EMBL:Y17421
EMBL:Y17422 EMBL:Y17423 EMBL:Y17424 EMBL:Y17425 EMBL:AC073149
EMBL:D17391 IPI:IPI00478572 PIR:A55360 RefSeq:NP_000083.3
UniGene:Hs.591645 ProteinModelPortal:P53420 SMR:P53420
IntAct:P53420 STRING:P53420 PhosphoSite:P53420 DMDM:259016360
PaxDb:P53420 PRIDE:P53420 Ensembl:ENST00000396625 GeneID:1286
KEGG:hsa:1286 UCSC:uc021vxr.1 CTD:1286 GeneCards:GC02M227867
H-InvDB:HIX0030014 HGNC:HGNC:2206 MIM:120131 neXtProt:NX_P53420
PharmGKB:PA26721 InParanoid:P53420 OMA:FRGDMGD ChiTaRS:COL4A4
GenomeRNAi:1286 NextBio:5201 Bgee:P53420 CleanEx:HS_COL4A4
Genevestigator:P53420 GermOnline:ENSG00000081052 Uniprot:P53420
Length = 1690
Score = 116 (45.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/101 (38%), Positives = 50/101 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEY--VMKSSDEGERGMKGSD--EGERGMKGSD 59
KG S G+RG++G+ +G G D+GE + + GE G G D GERG KG+
Sbjct: 938 KGMSGLPGDRGLRGA-KGAIGPPG-DEGEMAIISQKGTPGEPGPPGDDGFPGERGDKGTP 995
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G +G +G E G G G GE G KG G G GS
Sbjct: 996 -GMQGRRG-EPGRYGPPGFHRGEPGEKGQPGPPGPPGPPGS 1034
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 33/75 (44%), Positives = 40/75 (53%)
Query: 36 KSSDEGERGMKGSDEGERGMKG--SDEGERGMKGS-----EEGERGM---KGSDEGERGT 85
K EG G KG + GE+GM G D G RG KG+ +EGE + KG+ GE G
Sbjct: 922 KPGAEGCPGAKG-EPGEKGMSGLPGDRGLRGAKGAIGPPGDEGEMAIISQKGTP-GEPGP 979
Query: 86 KGSD--EGERGTKGS 98
G D GERG KG+
Sbjct: 980 PGDDGFPGERGDKGT 994
>UNIPROTKB|P83371 [details] [associations]
symbol:otol1 "Otolin-1" species:8018 "Oncorhynchus keta"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005576
"extracellular region" evidence=IDA] [GO:0045299 "otolith
mineralization" evidence=NAS] InterPro:IPR008983 GO:GO:0005576
HOVERGEN:HBG108220 GO:GO:0005581 Gene3D:2.60.120.40
InterPro:IPR001073 InterPro:IPR008160 Pfam:PF00386 Pfam:PF01391
PRINTS:PR00007 SMART:SM00110 SUPFAM:SSF49842 PROSITE:PS50871
GO:GO:0045299 EMBL:AB067770 ProteinModelPortal:P83371
Uniprot:P83371
Length = 508
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/100 (40%), Positives = 54/100 (54%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD 59
KGR GERG G ++ G + G +KG+ V G GM G+ EG++G KG D
Sbjct: 141 KGRGP-PGERGPPGPGAERGLPGVPG-EKGD-VGLMGPPGLDGMPGATGLEGDKGDKG-D 196
Query: 60 EGERGMKGSEE--GERGMKGSDEGERGTKGSDEGERGTKG 97
+G+ GM G+ G+ G KG D G +G KG + G G KG
Sbjct: 197 QGDTGMPGAPGILGKEGPKG-DLGPKGEKG-ETGLPGLKG 234
>UNIPROTKB|Q28083 [details] [associations]
symbol:COL11A1 "Collagen alpha-1(XI) chain" species:9913
"Bos taurus" [GO:0005581 "collagen" evidence=IEA] GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
HOGENOM:HOG000085654 HOVERGEN:HBG004933 Reactome:REACT_133391
OrthoDB:EOG49GKHM EMBL:M82977 IPI:IPI01028284 PIR:A56979 PIR:S18251
UniGene:Bt.9656 IntAct:Q28083 STRING:Q28083 PRIDE:Q28083
InParanoid:Q28083 Uniprot:Q28083
Length = 911
Score = 113 (44.8 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 749 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGVSGKD-GPAGLRGFP-GERGLPGA 804
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 805 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 834
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 525 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 573
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 574 RGEDGPEGPKGR-AGPTGDPGPP-GQAGEKG 602
Score = 100 (40.3 bits), Expect = 0.00043, P = 0.00043
Identities = 36/94 (38%), Positives = 48/94 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD-----EGER 63
G+RG G+D G+ + GE K D G G+ G D+G RG +G GE
Sbjct: 344 GKRGRPGADGGRGM-----PGEPGAKG-DRGFDGLPGLPGDKGHRGERGPQGPPGPPGED 397
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G++G E+GE G +G GE G +G G RGT G
Sbjct: 398 GIRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 428
>ZFIN|ZDB-GENE-081105-162 [details] [associations]
symbol:si:dkey-21p1.3 "si:dkey-21p1.3" species:7955
"Danio rerio" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 PROSITE:PS51461 SMART:SM00038
ZFIN:ZDB-GENE-081105-162 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201 HOVERGEN:HBG004933
GeneTree:ENSGT00700000104301 EMBL:CR450798 IPI:IPI00493667
Ensembl:ENSDART00000134775 OMA:TSEEEWE Uniprot:B0UYF9
Length = 1125
Score = 114 (45.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 11 GERGMKGSDEGKYVMKGSDK-GEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG-- 67
G RG++G +G + G Y K G G +G D+G +G++G D G +G+ G
Sbjct: 437 GVRGLEGH-QGPPGLPGPHGVAGYPGKDGPLGPIGPEG-DKGNKGLRG-DSGLKGVAGID 493
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
EEGE+G +GS G+ G KG +GE G +G
Sbjct: 494 GEEGEKGKEGS-VGDHGPKGI-QGESGNQG 521
Score = 114 (45.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 40/100 (40%), Positives = 55/100 (55%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EGE 62
G S G++G KG ++GK KG D GE ++GE G G D GE+G +G+ +GE
Sbjct: 1 GPSGVSGKQGRKG-EQGKLGPKGYD-GE----KGNKGELGEWG-DLGEKGPQGTQGMKGE 53
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKG 97
+G KG E+G G+ G ++G G GS G RG KG
Sbjct: 54 KGKKG-EKGLAGVIGYNKGGIGFTGSPGPPGHTGPRGLKG 92
>UNIPROTKB|Q81YQ6 [details] [associations]
symbol:BA_3482 "Uncharacterized protein" species:1392
"Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:AE016879 EMBL:AE017334
GenomeReviews:AE016879_GR GenomeReviews:AE017334_GR
InterPro:IPR024449 Pfam:PF12791 RefSeq:NP_845763.1
RefSeq:YP_022643.1 DNASU:1084171 EnsemblBacteria:EBBACT00000011330
EnsemblBacteria:EBBACT00000013938 GeneID:1084171 GeneID:2817342
KEGG:ban:BA_3482 KEGG:bar:GBAA_3482 PATRIC:18784566
HOGENOM:HOG000094522 OMA:GRESQGN ProtClustDB:CLSK917044
BioCyc:BANT261594:GJ7F-3401-MONOMER Uniprot:Q81YQ6
Length = 440
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + E ++G G+ +G + +++ G +G G+ +G G +GS +G
Sbjct: 309 QGNNGRESQQGNNGNQQGNNGRGSQGNNGHQQENNGRGSQGNNGNQQGNNG-RGS-QGNN 366
Query: 64 G--MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G + + G +G G+ +G+ G +GS +G G + D+
Sbjct: 367 GHQQENNGRGSQGNNGNQQGDNG-RGSQQGNNGNQQGDN 404
Score = 97 (39.2 bits), Expect = 0.00036, P = 0.00036
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + H+ E +GS +G G+ +G S + + G +G G+ +G+
Sbjct: 333 QGNNGHQQENNGRGS-QGN---NGNQQGNNGRGSQGNNGHQQENNGRGSQGNNGNQQGDN 388
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEG-ERGTKG 97
G +GS++G G + D G RG++ + G E+G G
Sbjct: 389 G-RGSQQGNNGNQQGDNG-RGSQKENVGNEQGNNG 421
Score = 93 (37.8 bits), Expect = 0.00097, P = 0.00097
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS-SDEGERGMKGSDEGERGMKGSDE 60
+ GR +G G + + G+ +G++ + +G G + + G RG +G++
Sbjct: 294 ENNGRESQQGNNGNQQGNNGRESQQGNNGNQQGNNGRGSQGNNGHQQENNG-RGSQGNNG 352
Query: 61 GERGMKG-SEEGERG--MKGSDEGERGTKGSDEGERGTKGS 98
++G G +G G + + G +G G+ +G+ G +GS
Sbjct: 353 NQQGNNGRGSQGNNGHQQENNGRGSQGNNGNQQGDNG-RGS 392
>TIGR_CMR|BA_3482 [details] [associations]
symbol:BA_3482 "conserved hypothetical protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:AE016879 EMBL:AE017334 GenomeReviews:AE016879_GR
GenomeReviews:AE017334_GR InterPro:IPR024449 Pfam:PF12791
RefSeq:NP_845763.1 RefSeq:YP_022643.1 DNASU:1084171
EnsemblBacteria:EBBACT00000011330 EnsemblBacteria:EBBACT00000013938
GeneID:1084171 GeneID:2817342 KEGG:ban:BA_3482 KEGG:bar:GBAA_3482
PATRIC:18784566 HOGENOM:HOG000094522 OMA:GRESQGN
ProtClustDB:CLSK917044 BioCyc:BANT261594:GJ7F-3401-MONOMER
Uniprot:Q81YQ6
Length = 440
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 24/99 (24%), Positives = 49/99 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + E ++G G+ +G + +++ G +G G+ +G G +GS +G
Sbjct: 309 QGNNGRESQQGNNGNQQGNNGRGSQGNNGHQQENNGRGSQGNNGNQQGNNG-RGS-QGNN 366
Query: 64 G--MKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G + + G +G G+ +G+ G +GS +G G + D+
Sbjct: 367 GHQQENNGRGSQGNNGNQQGDNG-RGSQQGNNGNQQGDN 404
Score = 97 (39.2 bits), Expect = 0.00036, P = 0.00036
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G + H+ E +GS +G G+ +G S + + G +G G+ +G+
Sbjct: 333 QGNNGHQQENNGRGS-QGN---NGNQQGNNGRGSQGNNGHQQENNGRGSQGNNGNQQGDN 388
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEG-ERGTKG 97
G +GS++G G + D G RG++ + G E+G G
Sbjct: 389 G-RGSQQGNNGNQQGDNG-RGSQKENVGNEQGNNG 421
Score = 93 (37.8 bits), Expect = 0.00097, P = 0.00097
Identities = 23/101 (22%), Positives = 48/101 (47%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS-SDEGERGMKGSDEGERGMKGSDE 60
+ GR +G G + + G+ +G++ + +G G + + G RG +G++
Sbjct: 294 ENNGRESQQGNNGNQQGNNGRESQQGNNGNQQGNNGRGSQGNNGHQQENNG-RGSQGNNG 352
Query: 61 GERGMKG-SEEGERG--MKGSDEGERGTKGSDEGERGTKGS 98
++G G +G G + + G +G G+ +G+ G +GS
Sbjct: 353 NQQGNNGRGSQGNNGHQQENNGRGSQGNNGNQQGDNG-RGS 392
>UNIPROTKB|A6NMZ7 [details] [associations]
symbol:COL6A6 "Collagen alpha-6(VI) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IDA] InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234
SMART:SM00327 Reactome:REACT_118779 Reactome:REACT_111045
Reactome:REACT_111102 GO:GO:0007155 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0031012 KO:K06238
eggNOG:NOG237718 HOGENOM:HOG000111864 OrthoDB:EOG476JZ9
HOVERGEN:HBG107743 EMBL:AM774225 EMBL:AM774226 EMBL:AM774227
EMBL:AC093006 EMBL:AC128683 EMBL:AL713792 IPI:IPI00856012
IPI:IPI00878721 RefSeq:NP_001096078.1 UniGene:Hs.591282
ProteinModelPortal:A6NMZ7 SMR:A6NMZ7 STRING:A6NMZ7
PhosphoSite:A6NMZ7 PaxDb:A6NMZ7 PRIDE:A6NMZ7
Ensembl:ENST00000358511 GeneID:131873 KEGG:hsa:131873
UCSC:uc010htl.3 CTD:131873 GeneCards:GC03P130280 H-InvDB:HIX0003677
HGNC:HGNC:27023 HPA:HPA045239 neXtProt:NX_A6NMZ7
PharmGKB:PA165697087 InParanoid:A6NMZ7 OMA:KRLMKRH
GenomeRNAi:131873 NextBio:82976 ArrayExpress:A6NMZ7 Bgee:A6NMZ7
Genevestigator:A6NMZ7 Uniprot:A6NMZ7
Length = 2263
Score = 117 (46.2 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G+ GE G+ G ++G + G +KG+ + S G+RG G D G +G++G D
Sbjct: 1455 GQEGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGSP-GKRGTPG-DRGAKGLRG-DP 1511
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G G+ S EG G+KG + G +G +G G GT GS
Sbjct: 1512 GAPGVDSSIEGPTGLKG-ERGRQGRRGWP-GPPGTPGS 1547
>ZFIN|ZDB-GENE-060526-119 [details] [associations]
symbol:si:ch211-233f10.5 "si:ch211-233f10.5"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-060526-119
InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210 GO:GO:0005201
SMART:SM00210 GeneTree:ENSGT00700000104301 IPI:IPI00507446
EMBL:BX001023 EMBL:CABZ01040285 EMBL:CR931814
Ensembl:ENSDART00000097297 Bgee:F1RB44 Uniprot:F1RB44
Length = 1619
Score = 115 (45.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS- 68
+GE+G +G D+GK G+ + + G+RG G D G G++G +GERG +G+
Sbjct: 1086 KGEKGEQG-DDGKVEGPPGPSGD-IGPVGNRGDRGEPG-DPGYPGLEGV-QGERGKEGAP 1141
Query: 69 ----EEGERGMKG--SDEGERGTKG--SDEGERGTKGS 98
G RG G +G +G KG S GE G +GS
Sbjct: 1142 GVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGS 1179
Score = 115 (45.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 40/106 (37%), Positives = 51/106 (48%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGE--YVMKSSDEGERGMKGSDEGERGMKGSD 59
KG S + GE GMKG G M G ++G +V + G G KG D GE G G
Sbjct: 726 KGISGNPGEEGMKGEPGMTGNPGMLG-ERGPVGFVGPFGEMGLAGEKG-DRGETGQPGPP 783
Query: 60 EGERGMKG--SEEGERGMKG-----SDEGERGTKGSDEGERGTKGS 98
GE+G G GERG+ G G RG G+ G +GT+G+
Sbjct: 784 -GEKGAMGHPGAPGERGLSGPAGAPGPHGSRGLSGT-RGPKGTRGA 827
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 40/112 (35%), Positives = 50/112 (44%)
Query: 4 KGRSVHEGERGMKGS-----DEGKYVMKGSDKGEYVM----KSSDEGERGMKGSDEGERG 54
KG H+G+ G G+ D G KGS M K GE G+ G EG +G
Sbjct: 1017 KGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGATGKMGQHGEPGLVGY-EGHQG 1075
Query: 55 MKGSDEGERGMKGSEEGERGMKGSDEGERGTKGS-----DEGERGTKGSDDY 101
+GS G G KG E+GE+G G EG G G + G+RG G Y
Sbjct: 1076 PQGS-LGSPGPKG-EKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGY 1125
Score = 103 (41.3 bits), Expect = 0.00040, P = 0.00040
Identities = 39/107 (36%), Positives = 53/107 (49%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKG--SDEGERGMK 56
KG G S H G++G +G D G KG G + + G +G++G G G+
Sbjct: 471 KGHPGPSGHPGDQGERGPD-GSPGAKGYP-GRQGLPGPIGNMGPKGVRGFIGIPGIFGLP 528
Query: 57 GSDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
G+D GERG+ G ++G+ G G D GERG G D GE G G
Sbjct: 529 GAD-GERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDGNPGEIGAPG 574
>ZFIN|ZDB-GENE-100119-2 [details] [associations]
symbol:col27a1b "collagen, type XXVII, alpha 1b"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IGI] [GO:0048570 "notochord
morphogenesis" evidence=IGI] [GO:0030282 "bone mineralization"
evidence=IGI] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-100119-2 GO:GO:0046872
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0001501 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025
GO:GO:0030282 Pfam:PF02210 GO:GO:0005201 HOGENOM:HOG000085654
KO:K06236 SMART:SM00210 HOVERGEN:HBG098141 OrthoDB:EOG4FBHSB
GO:GO:0048570 EMBL:EF032484 IPI:IPI00507446 RefSeq:NP_001074044.1
UniGene:Dr.115130 ProteinModelPortal:A0MSJ1 GeneID:560145
KEGG:dre:560145 CTD:560145 InParanoid:A0MSJ1 NextBio:20883309
Uniprot:A0MSJ1
Length = 1658
Score = 115 (45.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/98 (35%), Positives = 51/98 (52%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS- 68
+GE+G +G D+GK G+ + + G+RG G D G G++G +GERG +G+
Sbjct: 1125 KGEKGEQG-DDGKVEGPPGPSGD-IGPVGNRGDRGEPG-DPGYPGLEGV-QGERGKEGAP 1180
Query: 69 ----EEGERGMKG--SDEGERGTKG--SDEGERGTKGS 98
G RG G +G +G KG S GE G +GS
Sbjct: 1181 GVPGNSGPRGFPGPKGSKGNKGPKGKNSPRGESGNRGS 1218
Score = 115 (45.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/106 (37%), Positives = 51/106 (48%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGE--YVMKSSDEGERGMKGSDEGERGMKGSD 59
KG S + GE GMKG G M G ++G +V + G G KG D GE G G
Sbjct: 765 KGISGNPGEEGMKGEPGMTGNPGMLG-ERGPVGFVGPFGEMGLAGEKG-DRGETGQPGPP 822
Query: 60 EGERGMKG--SEEGERGMKG-----SDEGERGTKGSDEGERGTKGS 98
GE+G G GERG+ G G RG G+ G +GT+G+
Sbjct: 823 -GEKGAMGHPGAPGERGLSGPAGAPGPHGSRGLSGT-RGPKGTRGA 866
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 40/112 (35%), Positives = 51/112 (45%)
Query: 4 KGRSVHEGERGMKGS-----DEGKYVMKGSDKGEYVM----KSSDEGERGMKGSDEGERG 54
KG H+G+ G G+ D G KGS M K +GE G+ G EG +G
Sbjct: 1056 KGSKGHQGQLGEMGALGEQGDTGFIGPKGSRGTTGFMGAPGKMGQQGEPGLVGY-EGHQG 1114
Query: 55 MKGSDEGERGMKGSEEGERGMKGSDEGERGTKGS-----DEGERGTKGSDDY 101
+GS G G KG E+GE+G G EG G G + G+RG G Y
Sbjct: 1115 PQGS-LGSPGPKG-EKGEQGDDGKVEGPPGPSGDIGPVGNRGDRGEPGDPGY 1164
Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
Identities = 39/107 (36%), Positives = 54/107 (50%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKG--SDEGERGMK 56
KG G S H G++G++G D G KG G + + G +G++G G G+
Sbjct: 510 KGHPGPSGHPGDQGIRGPD-GSPGAKGYP-GRQGLPGPIGNMGPKGVRGFIGIPGIFGLP 567
Query: 57 GSDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
G+D GERG+ G ++G+ G G D GERG G D GE G G
Sbjct: 568 GAD-GERGLPGVPGKKGKMGRPGFPGDFGERGPPGPDGNPGEIGAPG 613
Score = 100 (40.3 bits), Expect = 0.00085, P = 0.00085
Identities = 36/103 (34%), Positives = 55/103 (53%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGS 58
KG KG++ GE G +GS G + G +G + + EGE G+ G+ +G +GM G
Sbjct: 1201 KGPKGKNSPRGESGNRGSP-GPVGVPGP-RG-VIGREGFEGEPGLDGAAGKDGAKGMPGD 1257
Query: 59 --DEGERGMKGSEEGERGMKGSDEGERGTKGS--DEGERGTKG 97
+G+ G+ G + G +G G+ G G +GS +GERG G
Sbjct: 1258 LGRDGDVGLPG-KPGPQGNAGAP-GLPGVQGSFGPKGERGITG 1298
>UNIPROTKB|A8TX70 [details] [associations]
symbol:COL6A5 "Collagen alpha-5(VI) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005576 "extracellular region"
evidence=IDA] [GO:0031012 "extracellular matrix" evidence=ISS]
InterPro:IPR002035 Pfam:PF00092 PROSITE:PS50234 SMART:SM00327
Reactome:REACT_118779 Reactome:REACT_111045 Reactome:REACT_111102
GO:GO:0005576 GO:GO:0007155 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG237718 OrthoDB:EOG476JZ9 EMBL:EU085556
EMBL:AM906078 EMBL:AM906079 EMBL:AM906080 EMBL:AM906081
EMBL:AM906082 EMBL:AM906083 EMBL:AM906084 EMBL:AC093004
EMBL:AC117398 EMBL:AK093199 EMBL:AK123718 IPI:IPI00176125
IPI:IPI00892863 RefSeq:NP_694996.5 UniGene:Hs.205403
ProteinModelPortal:A8TX70 SMR:A8TX70 STRING:A8TX70
PhosphoSite:A8TX70 PaxDb:A8TX70 PRIDE:A8TX70 DNASU:256076
Ensembl:ENST00000312481 GeneID:256076 KEGG:hsa:256076
UCSC:uc010htj.1 CTD:256076 GeneCards:GC03P130065 H-InvDB:HIX0003678
HGNC:HGNC:26674 HPA:HPA043138 MIM:611916 neXtProt:NX_A8TX70
PharmGKB:PA165696956 HOVERGEN:HBG107743 OMA:HLNAQFL
GenomeRNAi:256076 NextBio:92704 ArrayExpress:A8TX70 Bgee:A8TX70
Genevestigator:A8TX70 Uniprot:A8TX70
Length = 2615
Score = 117 (46.2 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG-SDE-GERGMKGS--D 59
KG+ +GE+G +G G+ ++GS EG+RG++G S E G G G+
Sbjct: 1524 KGQKGSKGEQGRQGRS-GQKGVQGSPSSRG--SRGREGQRGLRGVSGEPGNPGPTGTLGA 1580
Query: 60 EGERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKGS 98
EG +G +GS+ G +G KGS +G++G +GS G G KGS
Sbjct: 1581 EGLQGPQGSQGNPGRKGEKGS-QGQKGPQGSP-GLMGAKGS 1619
Score = 105 (42.0 bits), Expect = 0.00041, P = 0.00041
Identities = 36/109 (33%), Positives = 52/109 (47%)
Query: 1 MKG-KGRSVHEGERGMKGSD--EGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGM 55
+KG G G+ G+ G D EG + G +KG+ + S G RG G GE+G
Sbjct: 1453 LKGFSGPKGGHGDDGIDGLDGEEGCHGFPGIKGEKGDPGSQGSP-GSRGAPGQ-YGEKGF 1510
Query: 56 KGSDEGERGMKGSEEGERGMKGSD-----EGERGTKG--SDEGERGTKG 97
G D G G + +G++G KG G++G +G S G RG +G
Sbjct: 1511 PG-DPGNPGQNNNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREG 1558
Score = 104 (41.7 bits), Expect = 0.00052, P = 0.00052
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 1 MKG----KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMK 56
MKG KG H GE G G G +G DKG + G++G+KG G +G
Sbjct: 1408 MKGSQGLKGSRGHRGEDGNPGV-RGDTGPQG-DKGIAGCPGA-WGQKGLKGFS-GPKGGH 1463
Query: 57 GSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G D+G G+ G EEG G G +GE+G GS +G G++G+
Sbjct: 1464 G-DDGIDGLDG-EEGCHGFPGI-KGEKGDPGS-QGSPGSRGA 1501
>UNIPROTKB|G7N928 [details] [associations]
symbol:EGK_04858 "Putative uncharacterized protein"
species:9544 "Macaca mulatta" [GO:0005201 "extracellular matrix
structural constituent" evidence=ISS] [GO:0005587 "collagen type
IV" evidence=ISS] [GO:0005605 "basal lamina" evidence=ISS]
[GO:0032836 "glomerular basement membrane development"
evidence=ISS] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005605
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 GO:GO:0005587
Gene3D:2.170.240.10 GO:GO:0032836 EMBL:CM001264 Uniprot:G7N928
Length = 1692
Score = 115 (45.5 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/107 (38%), Positives = 49/107 (45%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGS-----DKGEY--VMKSSDEGERGMKGSD--EGER 53
G GE+GM G D+G KG+ D+GE + K GE G G D GER
Sbjct: 930 GTKGEPGEKGMSGFPGDQGVRGAKGAIGPPGDEGEMAIISKKGKPGEPGPPGDDGFPGER 989
Query: 54 GMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
G KG+ G +G +G E G G G GE G KG G G GS
Sbjct: 990 GDKGTP-GMQGRRG-EPGRYGPPGFYRGEPGEKGQPGPPGPPGPPGS 1034
>MGI|MGI:2152907 [details] [associations]
symbol:Colec12 "collectin sub-family member 12"
species:10090 "Mus musculus" [GO:0002221 "pattern recognition
receptor signaling pathway" evidence=ISO;ISS] [GO:0005581
"collagen" evidence=IEA] [GO:0006910 "phagocytosis, recognition"
evidence=ISO;ISS] [GO:0006955 "immune response" evidence=IDA]
[GO:0008329 "pattern recognition receptor activity"
evidence=ISO;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=ISS] [GO:0030169 "low-density
lipoprotein particle binding" evidence=ISO;ISS] [GO:0030246
"carbohydrate binding" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001304 Pfam:PF00059
PROSITE:PS50041 SMART:SM00034 MGI:MGI:2152907 GO:GO:0016021
GO:GO:0006955 GO:GO:0046872 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR018378 GO:GO:0030169 GO:GO:0008329 GO:GO:0006910
CTD:81035 eggNOG:NOG147335 GeneTree:ENSGT00700000104492
HOGENOM:HOG000111886 HOVERGEN:HBG107745 KO:K10062 OMA:NGCPPHW
OrthoDB:EOG4KH2TV ChiTaRS:COLEC12 EMBL:AB038519 EMBL:AB078434
EMBL:AK042772 EMBL:AK158366 EMBL:BC057936 IPI:IPI00129304
RefSeq:NP_569716.2 UniGene:Mm.218571 PDB:2OX9 PDBsum:2OX9
ProteinModelPortal:Q8K4Q8 SMR:Q8K4Q8 STRING:Q8K4Q8
PhosphoSite:Q8K4Q8 PaxDb:Q8K4Q8 PRIDE:Q8K4Q8
Ensembl:ENSMUST00000040069 GeneID:140792 KEGG:mmu:140792
UCSC:uc008eak.2 InParanoid:Q8K4Q8 EvolutionaryTrace:Q8K4Q8
NextBio:369985 Bgee:Q8K4Q8 CleanEx:MM_COLEC12 Genevestigator:Q8K4Q8
Uniprot:Q8K4Q8
Length = 742
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/60 (51%), Positives = 35/60 (58%)
Query: 41 GERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
G RG KG D G +G G G +G KG E+GE G G GERGT G GERG+KGS
Sbjct: 446 GPRGPKG-DRGSQGPPGPT-GNKGQKG-EKGEPGPPGP-AGERGTIGPVGPPGERGSKGS 501
>RGD|735039 [details] [associations]
symbol:Colec12 "collectin sub-family member 12" species:10116
"Rattus norvegicus" [GO:0002221 "pattern recognition receptor
signaling pathway" evidence=ISO] [GO:0005581 "collagen"
evidence=IEA] [GO:0006910 "phagocytosis, recognition"
evidence=ISO;ISS] [GO:0006955 "immune response" evidence=IEA;ISO]
[GO:0008329 "pattern recognition receptor activity"
evidence=ISO;ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030169 "low-density lipoprotein particle binding"
evidence=ISO;ISS] [GO:0030246 "carbohydrate binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 RGD:735039 GO:GO:0016021
GO:GO:0006955 GO:GO:0046872 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR018378 GO:GO:0030169 GO:GO:0008329 HSSP:Q15201
GO:GO:0006910 CTD:81035 eggNOG:NOG147335
GeneTree:ENSGT00700000104492 HOGENOM:HOG000111886
HOVERGEN:HBG107745 KO:K10062 OrthoDB:EOG4KH2TV EMBL:BC097495
EMBL:AB080968 IPI:IPI00364943 RefSeq:NP_001020892.1
UniGene:Rn.31273 ProteinModelPortal:Q4V885 SMR:Q4V885 STRING:Q4V885
PRIDE:Q4V885 Ensembl:ENSRNOT00000021945 Ensembl:ENSRNOT00000065494
GeneID:361289 KEGG:rno:361289 UCSC:RGD:735039 InParanoid:Q76LC3
NextBio:675835 Genevestigator:Q4V885 Uniprot:Q4V885
Length = 742
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/60 (51%), Positives = 35/60 (58%)
Query: 41 GERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
G RG KG D G +G G G +G KG E+GE G G GERGT G GERG+KGS
Sbjct: 446 GPRGPKG-DRGSQGPPGPT-GNKGQKG-EKGEPGPPGP-AGERGTIGPVGPPGERGSKGS 501
>UNIPROTKB|P12106 [details] [associations]
symbol:COL9A1 "Collagen alpha-1(IX) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR008985 SUPFAM:SSF49899 HOGENOM:HOG000085653
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 PROSITE:PS50025 HOVERGEN:HBG004933 SMART:SM00210
EMBL:M28659 EMBL:J03539 EMBL:K01702 EMBL:M11325 EMBL:M11324
IPI:IPI00819026 PIR:B34493 UniGene:Gga.16397
ProteinModelPortal:P12106 SMR:P12106 OrthoDB:EOG4P2Q36
Uniprot:P12106
Length = 920
Score = 112 (44.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/106 (36%), Positives = 53/106 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSDE 60
GKG GE G KG ++G +G D GE D G G KGS + G+ G +G E
Sbjct: 660 GKGDRGSAGEPGPKG-EQGAPGSEG-DAGEKG-DLGDMGLPGAKGSVGNPGDPGSRGP-E 715
Query: 61 GERGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGSDDYV 102
G RG+ G E G RG G +GE+G G +G G + +D ++
Sbjct: 716 GSRGLPGME-GPRGAPGPRGLQGEQGAPGLPGSQGPAGKEPTDQHI 760
Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
Identities = 34/98 (34%), Positives = 55/98 (56%)
Query: 10 EGERGMKG-SDE-GKYVMKGSDKGEY-VMKSSDEGERGMKG--SDEGERGMKGSDEGERG 64
+G++G KG S E GK KG + G+ + + +G G+ G G G KG+ +G RG
Sbjct: 427 KGQKGSKGESGELGKQGYKGEEGGQGPIGEVGAQGPLGIPGIRGITGITGPKGN-KGARG 485
Query: 65 MKGSEEGERGMKGSD--EGERGTKGSD--EGERGTKGS 98
+ G G +G+ G+ +G+RG G + +GERG +G+
Sbjct: 486 LDGGP-GPQGLPGAPGGQGQRGPVGEEGPKGERGPQGT 522
Score = 99 (39.9 bits), Expect = 0.00056, P = 0.00056
Identities = 34/101 (33%), Positives = 53/101 (52%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGS 58
KG KG S G++G KG + G+ + G + + G RG+ G +G +G +G
Sbjct: 430 KGSKGESGELGKQGYKGEEGGQGPI-GEVGAQGPL--GIPGIRGITGITGPKGNKGARGL 486
Query: 59 D--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
D G +G+ G+ G+ G +G GE G KG + G +GT+G
Sbjct: 487 DGGPGPQGLPGAPGGQ-GQRGP-VGEEGPKG-ERGPQGTRG 524
>WB|WBGene00000655 [details] [associations]
symbol:col-79 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
InterPro:IPR002486 Pfam:PF01484 SMART:SM01088 GO:GO:0005581
GO:GO:0040002 EMBL:Z46791 GO:GO:0042302 HOGENOM:HOG000085656
GeneTree:ENSGT00530000064217 PIR:T19141 RefSeq:NP_496308.1
UniGene:Cel.15911 ProteinModelPortal:Q09233 STRING:Q09233
EnsemblMetazoa:C09G5.3 GeneID:174650 KEGG:cel:CELE_C09G5.3
UCSC:C09G5.3 CTD:174650 WormBase:C09G5.3 eggNOG:NOG304487
InParanoid:Q09233 OMA:QGTEGQP NextBio:884914 Uniprot:Q09233
Length = 283
Score = 105 (42.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--DE 60
GKG G G G K + + KG +D G RG G+D G+ G+ G DE
Sbjct: 182 GKGPQGPPGTPGRPGQPGRKAIGEAGPKGPPGAPGTD-GRRGENGTD-GDDGVDGQPGDE 239
Query: 61 GERGMKGS--EEGERGMKGSDEGERGTKGS 88
G+ G G+ E G +G +G+ EG+ GT G+
Sbjct: 240 GDAGKDGTPGEPGPQGEQGT-EGQPGTDGA 268
Score = 99 (39.9 bits), Expect = 0.00011, P = 0.00011
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G+S G +G +G G G + + ++ +G G G+D G RG G+D G+ G
Sbjct: 175 GKSGAPGGKGPQGPP-GTPGRPGQPGRKAIGEAGPKGPPGAPGTD-GRRGENGTD-GDDG 231
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G + G+ G G D G G G +GE+GT+G
Sbjct: 232 VDG-QPGDEGDAGKD-GTPGEPGP-QGEQGTEG 261
>FB|FBgn0000299 [details] [associations]
symbol:Cg25C "Collagen type IV" species:7227 "Drosophila
melanogaster" [GO:0005587 "collagen type IV" evidence=NAS;TAS]
[GO:0007391 "dorsal closure" evidence=TAS] [GO:0005604 "basement
membrane" evidence=NAS] [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0035848 "oviduct morphogenesis" evidence=IMP]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
EMBL:AE014134 GO:GO:0007391 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 GO:GO:0005201
GO:GO:0005587 Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772
EMBL:J02727 EMBL:M23704 EMBL:M96575 EMBL:V00200 EMBL:M28334
PIR:A31893 RefSeq:NP_723044.1 RefSeq:NP_723045.1 RefSeq:NP_723046.1
UniGene:Dm.5178 ProteinModelPortal:P08120 SMR:P08120 DIP:DIP-59819N
MINT:MINT-1738460 STRING:P08120 PaxDb:P08120
EnsemblMetazoa:FBtr0079001 EnsemblMetazoa:FBtr0079002
EnsemblMetazoa:FBtr0079003 GeneID:33727 KEGG:dme:Dmel_CG4145
CTD:33727 FlyBase:FBgn0000299 InParanoid:P08120 KO:K06237
OMA:YPGESGY OrthoDB:EOG4Q575C PhylomeDB:P08120 ChiTaRS:Cg25C
GenomeRNAi:33727 NextBio:784979 Bgee:P08120 GermOnline:CG4145
GO:GO:0035848 Uniprot:P08120
Length = 1779
Score = 115 (45.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 40/101 (39%), Positives = 50/101 (49%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGE--YVMKSSDEGERGMKGSDEGERGMKGS 58
KG GRS +GE G DE K KG+ KGE GE G G + G G+KG+
Sbjct: 736 KGSFGRSGEKGEPGSCALDEIKMPAKGN-KGEPGQTGMPGPPGEDGSPG-ERGYTGLKGN 793
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G +G G E G RG+ G GE+G +G+ G G G D
Sbjct: 794 T-GPQGPPGVE-GPRGLNGP-RGEKGNQGA-VGVPGNPGKD 830
Score = 107 (42.7 bits), Expect = 0.00017, P = 0.00017
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSD--EGERGMK 66
GERG+ G G+ + G G + + +GERG+ GS G+ G G+ +G+ G +
Sbjct: 1321 GERGLPGL-AGEPGLVGLP-GP-IGPAGSKGERGLAGSPGQPGQDGFPGAPGLKGDTGPQ 1377
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G + GERG+ G EG++G KG D G +G G
Sbjct: 1378 GFK-GERGLNGF-EGQKGDKG-DRGLQGPSG 1405
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 39/102 (38%), Positives = 50/102 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSDEGE 62
G + +GERG+ GS G+ G G +K D G +G KG G G KG D+G+
Sbjct: 1342 GPAGSKGERGLAGSP-GQPGQDGFP-GAPGLKG-DTGPQGFKGERGLNGFEGQKG-DKGD 1397
Query: 63 RGMKGSE--EGERGMKGSDEGERGTKGSD-----EGERGTKG 97
RG++G G G KG D G G G+D GERG G
Sbjct: 1398 RGLQGPSGLPGLVGQKG-DTGYPGLNGNDGPVGAPGERGFTG 1438
Score = 103 (41.3 bits), Expect = 0.00044, P = 0.00044
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 38 SDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+++G RG+ G G G+KG + G GM+G G++G KG D G G +G D+GERG+ G
Sbjct: 86 AEKGNRGLPGP-LGPTGLKG-EMGFPGMEGPS-GDKGQKG-DPGPYGQRG-DKGERGSPG 140
Score = 103 (41.3 bits), Expect = 0.00044, P = 0.00044
Identities = 35/97 (36%), Positives = 49/97 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKG--EYVMKSSDEGERGMKGSD--EGERGMKGSDE 60
G+ G G+KG D G KG ++G + + D+G+RG++G G G KG D
Sbjct: 1360 GQDGFPGAPGLKG-DTGPQGFKG-ERGLNGFEGQKGDKGDRGLQGPSGLPGLVGQKG-DT 1416
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G+ G++ G G G + G G KG D G GT G
Sbjct: 1417 GYPGLNGND-GPVGAPG-ERGFTGPKGRD-GRDGTPG 1450
Score = 102 (41.0 bits), Expect = 0.00056, P = 0.00056
Identities = 37/107 (34%), Positives = 52/107 (48%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGS--D 59
KG +GE+G+ G+ ++G G D + S +GE G G D G +G KGS
Sbjct: 683 KGEFGFKGEKGLSGAPGNDGTPGRAGRDGYPGIPGQSIKGEPGFHGRD-GAKGDKGSFGR 741
Query: 60 EGERGMKGS---EEGERGMKGSDEGERGTKG--SDEGERGTKGSDDY 101
GE+G GS +E + KG+ +GE G G GE G+ G Y
Sbjct: 742 SGEKGEPGSCALDEIKMPAKGN-KGEPGQTGMPGPPGEDGSPGERGY 787
>ZFIN|ZDB-GENE-030131-2317 [details] [associations]
symbol:ewsr1a "Ewing sarcoma breakpoint region 1a"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0007067 "mitosis" evidence=IMP]
[GO:0021954 "central nervous system neuron development"
evidence=IMP] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
ZFIN:ZDB-GENE-030131-2317 GO:GO:0007067 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0005622 GO:GO:0021954
eggNOG:NOG240581 HOGENOM:HOG000038010 HOVERGEN:HBG000970 KO:K13209
OrthoDB:EOG42NJ15 EMBL:BC068397 IPI:IPI00488733
RefSeq:NP_001108610.1 UniGene:Dr.5648 ProteinModelPortal:Q6NUX1
PRIDE:Q6NUX1 GeneID:323597 KEGG:dre:323597 CTD:323597
NextBio:20808342 ArrayExpress:Q6NUX1 Bgee:Q6NUX1 Uniprot:Q6NUX1
Length = 624
Score = 83 (34.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 41 GERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G+RG +G G RG +G D G G G G RG +G D G +G D G G +G
Sbjct: 535 GDRG-RGGPGGMRGGRGMDRGGPGGPG---GFRGGRGVDRGGFRGRGMDRGGFGGRG 587
Score = 49 (22.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKG 31
M G+G + G G +G D G ++ +G +G
Sbjct: 450 MMGRGGMMGRGGMG-RGGDRGGFMPRGGPRG 479
>WB|WBGene00004397 [details] [associations]
symbol:rol-6 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0042338 "cuticle
development involved in collagen and cuticulin-based cuticle
molting cycle" evidence=IMP] [GO:0005578 "proteinaceous
extracellular matrix" evidence=ISS] [GO:0042329 "structural
constituent of collagen and cuticulin-based cuticle" evidence=ISS]
[GO:0060102 "collagen and cuticulin-based cuticle extracellular
matrix" evidence=IDA] InterPro:IPR002486 Pfam:PF01484 SMART:SM01088
GO:GO:0018991 GO:GO:0010171 GO:GO:0040011 GO:GO:0030163
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0042329
HOGENOM:HOG000085656 GO:GO:0060102 EMBL:Z66499 GO:GO:0042338
GeneTree:ENSGT00390000012316 EMBL:M34451 PIR:A34705
RefSeq:NP_495858.1 ProteinModelPortal:P20784 STRING:P20784
PaxDb:P20784 EnsemblMetazoa:T01B7.7 GeneID:174397
KEGG:cel:CELE_T01B7.7 UCSC:T01B7.7 CTD:174397 WormBase:T01B7.7
eggNOG:NOG318822 InParanoid:P20784 OMA:NIWNELD NextBio:883858
PMAP-CutDB:P20784 Uniprot:P20784
Length = 348
Score = 106 (42.4 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/100 (34%), Positives = 47/100 (47%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+G H+G+ G+ G D + + V G + G +G G+ G RGM+G+ G
Sbjct: 160 EGPDGHDGQDGVPGFDGKDAEDVQNTPPTGCFTCPQGPLGPQGPNGAP-GLRGMRGA-RG 217
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
+ G G +G GM G D G G GSD G G KG D
Sbjct: 218 QPGRPG-RDGNPGMPG-DCGPPGAPGSDGKPGSPGGKGDD 255
>MGI|MGI:104688 [details] [associations]
symbol:Col4a3 "collagen, type IV, alpha 3" species:10090 "Mus
musculus" [GO:0005178 "integrin binding" evidence=ISO] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005587 "collagen type IV"
evidence=ISO;IDA] [GO:0005604 "basement membrane" evidence=ISO;IDA]
[GO:0006917 "induction of apoptosis" evidence=ISO] [GO:0006919
"activation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0007166 "cell surface receptor signaling pathway"
evidence=IDA] [GO:0008283 "cell proliferation" evidence=ISO]
[GO:0016525 "negative regulation of angiogenesis" evidence=ISO;IDA]
[GO:0032836 "glomerular basement membrane development"
evidence=IMP] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 MGI:MGI:104688 GO:GO:0006917 GO:GO:0008283
GO:GO:0009749 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0007155
GO:GO:0006919 GO:GO:0007166 GO:GO:0005178 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 GO:GO:0016525 GO:GO:0005201
HOVERGEN:HBG004933 HOGENOM:HOG000085652 GO:GO:0005587
Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772 KO:K06237
OrthoDB:EOG42JNQS CTD:1285 GO:GO:0032836 EMBL:AF169387
EMBL:AC123746 EMBL:AC138214 EMBL:Z35166 EMBL:X82205 EMBL:AK033387
IPI:IPI00137938 PIR:I48302 PIR:S49488 RefSeq:NP_031760.2
UniGene:Mm.389135 HSSP:Q7SIB2 ProteinModelPortal:Q9QZS0 SMR:Q9QZS0
STRING:Q9QZS0 PhosphoSite:Q9QZS0 PRIDE:Q9QZS0
Ensembl:ENSMUST00000113457 GeneID:12828 KEGG:mmu:12828
UCSC:uc007brv.1 InParanoid:Q9QZS0 OMA:GMRGNQG ChiTaRS:COL4A3
NextBio:282322 Bgee:Q9QZS0 CleanEx:MM_COL4A3 Genevestigator:Q9QZS0
Uniprot:Q9QZS0
Length = 1669
Score = 114 (45.2 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 43/103 (41%), Positives = 52/103 (50%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKY--VMKGSDKGEYVMKS--SDEGERGMKGSDEGERGM 55
MKG KGR +GERG KG ++KG DKGE +K + GE+G +G+ G G
Sbjct: 921 MKGEKGRPGAKGERGEKGKPGPSQTTLLKG-DKGEPGLKGFVGNPGEKGNRGNP-GLPGP 978
Query: 56 KGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
KG EG G+ G G RG D G RG G G G GS
Sbjct: 979 KGL-EGLPGLPGPP-GPRG----DTGSRGNPGRP-GPHGMPGS 1014
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/108 (37%), Positives = 52/108 (48%)
Query: 2 KGK-GRSV--HEGERGMKG-----SDEGKYVM---KGSDKGEYVMKSSDEGERGMKGSDE 50
KG G SV +GERGMKG G + + +K ++ + DEGERG G
Sbjct: 215 KGHMGDSVIGQKGERGMKGLTGPPGPPGTVIFTLTQPYNKSDFKGEKGDEGERGEPGPP- 273
Query: 51 GERGMKGSDEG-ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G G G E+G G E G RG G D G G G+ EG +G +G
Sbjct: 274 GPSGPPGDSYGSEKGAPG-EPGPRGKPGKD-GAPGFPGT-EGAKGNRG 318
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 38/94 (40%), Positives = 47/94 (50%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDEGERGMK 66
GE G+KG D G G EY ++GERGM G +G RG +G G G+
Sbjct: 324 GEAGIKGRKGDIGPPGFPGPT--EYYDAYLEKGERGMPGLPGPKGARGPQGPS-GPPGVP 380
Query: 67 GSEEGER-GMKGSDEGERGTKGSDEGERGTKGSD 99
GS R G++G G G KGS +GERG G D
Sbjct: 381 GSPGLSRPGLRGPI-GWPGLKGS-KGERGPPGKD 412
>MGI|MGI:88447 [details] [associations]
symbol:Col11a2 "collagen, type XI, alpha 2" species:10090 "Mus
musculus" [GO:0001501 "skeletal system development" evidence=ISO]
[GO:0001503 "ossification" evidence=ISO] [GO:0001894 "tissue
homeostasis" evidence=IMP] [GO:0002062 "chondrocyte
differentiation" evidence=IMP] [GO:0005201 "extracellular matrix
structural constituent" evidence=IC] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005581 "collagen" evidence=IDA]
[GO:0005592 "collagen type XI" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO;IMP] [GO:0030199 "collagen fibril
organization" evidence=ISO;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IMP] [GO:0051216 "cartilage development" evidence=ISO]
[GO:0060021 "palate development" evidence=ISO] [GO:0060023 "soft
palate development" evidence=ISO] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 MGI:MGI:88447
GO:GO:0046872 GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001894 GO:GO:0007605
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0002062
GO:GO:0048705 EMBL:AF100956 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:1302 GO:GO:0060023 EMBL:U16789
EMBL:U16790 EMBL:D38412 EMBL:D84066 IPI:IPI00138069 IPI:IPI00283627
IPI:IPI00283629 IPI:IPI00466773 IPI:IPI00466863 IPI:IPI00469449
IPI:IPI00626876 PIR:A55576 RefSeq:NP_034056.1 UniGene:Mm.20230
ProteinModelPortal:Q64739 SMR:Q64739 STRING:Q64739
PhosphoSite:Q64739 PaxDb:Q64739 PRIDE:Q64739 DNASU:12815
Ensembl:ENSMUST00000087497 Ensembl:ENSMUST00000114252
Ensembl:ENSMUST00000114255 GeneID:12815 KEGG:mmu:12815
UCSC:uc008cbc.1 InParanoid:Q64739 OMA:MQEDEAI OrthoDB:EOG4BRWM8
NextBio:282274 Bgee:Q64739 CleanEx:MM_COL11A2 Genevestigator:Q64739
GermOnline:ENSMUSG00000024330 Uniprot:Q64739
Length = 1736
Score = 114 (45.2 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G + G MKG D+G + GE+G +G D G +G+ G ++G
Sbjct: 537 RGRAGADGARGMPG-EPG---MKG-DRGFDGLPGLP-GEKGQRG-DTGAQGLPGPPGEDG 589
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 590 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 622
Score = 110 (43.8 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 38/98 (38%), Positives = 48/98 (48%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G S GERG G G+ + G+ G+ K D G G G D G G++G GE
Sbjct: 934 GESGPMGERGHSGPPGPPGEQGLPGTS-GKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GE 989
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
RG+ G+ G G+KG+ EG G G GERG GS
Sbjct: 990 RGLPGTAGGP-GLKGN-EGPAGPPGPAGSPGERGAAGS 1025
Score = 102 (41.0 bits), Expect = 0.00055, P = 0.00055
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 729 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPTG 787
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 788 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 829
Score = 100 (40.3 bits), Expect = 0.00090, P = 0.00090
Identities = 37/103 (35%), Positives = 45/103 (43%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGE-YVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG S GE G G G KG+ + GE G +G D G +G +G D
Sbjct: 1239 KGESGQAGEAGPPGPKGPTGDNGPKGNPGPVGFPGDPGPPGEAGPRGQD-GAKGDRGED- 1296
Query: 61 GERGMKGSE--EGERGMKG--SDEGERGTKGSD--EGERGTKG 97
GE G GS GE G G G GT G + +GE+G KG
Sbjct: 1297 GEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKG 1339
>MGI|MGI:88446 [details] [associations]
symbol:Col11a1 "collagen, type XI, alpha 1" species:10090 "Mus
musculus" [GO:0001502 "cartilage condensation" evidence=IMP]
[GO:0002063 "chondrocyte development" evidence=IMP] [GO:0003007
"heart morphogenesis" evidence=IGI] [GO:0003674
"molecular_function" evidence=ND] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005576 "extracellular
region" evidence=IEA] [GO:0005578 "proteinaceous extracellular
matrix" evidence=IEA] [GO:0005581 "collagen" evidence=IDA]
[GO:0005592 "collagen type XI" evidence=ISO] [GO:0006029
"proteoglycan metabolic process" evidence=IMP] [GO:0007601 "visual
perception" evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0030199 "collagen fibril organization"
evidence=IGI;IMP] [GO:0031012 "extracellular matrix"
evidence=ISO;IDA] [GO:0035989 "tendon development"
evidence=IGI;IMP] [GO:0042472 "inner ear morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IMP]
[GO:0048705 "skeletal system morphogenesis" evidence=IMP]
[GO:0050910 "detection of mechanical stimulus involved in sensory
perception of sound" evidence=ISO] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IMP] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 MGI:MGI:88446
GO:GO:0046872 GO:GO:0007601 GO:GO:0030199 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472
GO:GO:0050910 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0001502 GO:GO:0048704 GO:GO:0001503 GO:GO:0006029
GO:GO:0055010 Pfam:PF02210 GO:GO:0005201 GO:GO:0002063
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 OrthoDB:EOG49GKHM
SMART:SM00210 GeneTree:ENSGT00700000104155 CTD:1301 OMA:HPGKEGQ
EMBL:D38162 EMBL:BC052161 EMBL:S74574 IPI:IPI00230065
IPI:IPI00400048 PIR:A55648 RefSeq:NP_031755.2 UniGene:Mm.209715
ProteinModelPortal:Q61245 STRING:Q61245 PhosphoSite:Q61245
PaxDb:Q61245 PRIDE:Q61245 Ensembl:ENSMUST00000092155 GeneID:12814
KEGG:mmu:12814 NextBio:282270 Bgee:Q61245 CleanEx:MM_COL11A1
Genevestigator:Q61245 Uniprot:Q61245
Length = 1804
Score = 114 (45.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/92 (38%), Positives = 52/92 (56%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 980 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGISGKD-GPAGIRGFP-GERGLPGA 1035
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
+ G G+KG + +G +G GS GERG+ G+
Sbjct: 1036 Q-GAPGLKGGEGPQGPQGPVGSP-GERGSAGT 1065
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 756 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 804
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 805 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 833
Score = 106 (42.4 bits), Expect = 0.00021, P = 0.00021
Identities = 37/94 (39%), Positives = 50/94 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+GR +G RGM G + G +G D G + D+G RG +G +G G+ G D
Sbjct: 577 RGRPGADGGRGMPG-ESGSKGDRGFD-GLPGLPG-DKGHRGERGP-QGPPGLPGDD---- 628
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 629 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 659
Score = 101 (40.6 bits), Expect = 0.00073, P = 0.00073
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G+G G +G +G D G + G DKG + + +G G+ G D+G RG G + G
Sbjct: 585 GRGMPGESGSKGDRGFD-GLPGLPG-DKG-HRGERGPQGPPGLPG-DDGMRGEDG-EIGP 639
Query: 63 RGMKGSEEGERGMKG-----SDEGERGTKGSDEGERGTKGS 98
RG+ G E G RG+ G G+ G G D G +G KG+
Sbjct: 640 RGLPG-EAGPRGLLGPRGTPGPPGQPGIGGID-GPQGPKGN 678
>UNIPROTKB|F1MJQ6 [details] [associations]
symbol:F1MJQ6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008201 "heparin binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005588 "collagen type V"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 GO:GO:0008201
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Pfam:PF02210 GO:GO:0005201
GO:GO:0005588 SMART:SM00210 GeneTree:ENSGT00700000104155
OMA:KGDVGQD EMBL:DAAA02019448 EMBL:DAAA02019447 IPI:IPI00716031
Ensembl:ENSBTAT00000013440 Uniprot:F1MJQ6
Length = 1805
Score = 114 (45.2 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 36/93 (38%), Positives = 51/93 (54%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+ G ++G +KGE +GE G G +G+ G+KG D G+ G G
Sbjct: 769 YPGPRGVKGTS-GNRGLQG-EKGE-------KGEDGFPGF-KGDAGLKG-DRGQPGPPGP 817
Query: 68 -SEEGERGMKGSDE--GERGTKGSDEGERGTKG 97
E+G G+KG + GE G GS GE+G G
Sbjct: 818 RGEDGPEGLKGQEGLLGEEGPPGS-AGEKGKLG 849
>ZFIN|ZDB-GENE-120514-2 [details] [associations]
symbol:marco "macrophage receptor with collagenous
structure" species:7955 "Danio rerio" [GO:0005044 "scavenger
receptor activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001190 InterPro:IPR017448 Pfam:PF00530
PRINTS:PR00258 PROSITE:PS00420 PROSITE:PS50287 SMART:SM00202
ZFIN:ZDB-GENE-120514-2 GO:GO:0016020 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005044 SUPFAM:SSF56487
GeneTree:ENSGT00640000091447 EMBL:CABZ01070419 EMBL:CABZ01070420
IPI:IPI00502763 Ensembl:ENSDART00000082368 Bgee:F1QU19
Uniprot:F1QU19
Length = 388
Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G+ G+ G+KG + G G + D GERG++G+D G+ G+D G G
Sbjct: 5 GQKGQTGDPGIKG-ERGMVGFPGIPGAPG--RKGDSGERGLQGTDV-LTGLPGND-GSPG 59
Query: 65 MKGSEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
G G +GM G G +G KG +GERG +G
Sbjct: 60 QDG-RTGPQGMPGPS-GSQGVKGDPGLKGERGDQG 92
Score = 102 (41.0 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 39/112 (34%), Positives = 53/112 (47%)
Query: 5 GRSVHEGERGMKGSD-----EGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGERGM 55
GR GERG++G+D G G D G M G +G+KG +GERG
Sbjct: 32 GRKGDSGERGLQGTDVLTGLPGNDGSPGQDGRTGPQGMPGPS-GSQGVKGDPGLKGERGD 90
Query: 56 KGSDEGERGMKGSEEGERGMKG--SDEGERGTKGSD-------EGERGTKGS 98
+G G G +GS G RG++G ++G G KG G++G KGS
Sbjct: 91 QGPP-GPTGPQGSS-GARGLQGIPGEKGSPGPKGDTGVGLQGPTGQQGQKGS 140
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G RG++G ++G KG D G V G++G KGS +G G+ G+ RG G
Sbjct: 104 GARGLQGIPGEKGSPGPKG-DTG--VGLQGPTGQQGQKGS-QGVPGVPGA----RGANG- 154
Query: 69 EEGERGMKGSDEGERGTKGSD--EGERGTKG 97
E+G+RG+ SD G KG +GERG +G
Sbjct: 155 EKGDRGL--SDVSSSGVKGDPGLKGERGDQG 183
Score = 100 (40.3 bits), Expect = 0.00014, P = 0.00014
Identities = 35/99 (35%), Positives = 53/99 (53%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--E 60
G G G++G KGS +G + G+ +G + ++G+RG+ SD G+KG +
Sbjct: 125 GVGLQGPTGQQGQKGS-QGVPGVPGA-RGA----NGEKGDRGL--SDVSSSGVKGDPGLK 176
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
GERG +G + G G +GS G RG +G +G G KG
Sbjct: 177 GERGDQG-QPGPTGPQGSS-GARGLQGIPGGKGSPGPKG 213
Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
Identities = 34/95 (35%), Positives = 46/95 (48%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEY-VMKSSDEGERGMKGSD-----EGERGMKGSDEGERG 64
G RG++G GK KG+ V G++G KGS G RG G ++G+RG
Sbjct: 195 GARGLQGIPGGKG--SPGPKGDTGVGLRGLTGQQGQKGSQGLPGVPGARGANG-EKGDRG 251
Query: 65 MKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G G KG D+G +G KG D G +G G
Sbjct: 252 LSGEAYIPDLLGQKG-DQGPKGEKG-DAGAKGASG 284
>WB|WBGene00019510 [details] [associations]
symbol:K07H8.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0009792 GO:GO:0040010 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 KO:K11294
GeneTree:ENSGT00550000074656 EMBL:FO081300 PIR:T33022
RefSeq:NP_501391.1 ProteinModelPortal:O45181 SMR:O45181
STRING:O45181 PaxDb:O45181 EnsemblMetazoa:K07H8.10.1
EnsemblMetazoa:K07H8.10.2 GeneID:177621 KEGG:cel:CELE_K07H8.10
UCSC:K07H8.10.1 CTD:177621 WormBase:K07H8.10 eggNOG:NOG242408
HOGENOM:HOG000016491 InParanoid:O45181 OMA:DRGRSPG NextBio:897644
Uniprot:O45181
Length = 798
Score = 110 (43.8 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 31/100 (31%), Positives = 45/100 (45%)
Query: 2 KGKGRSVHEGERG-MKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEG--ERGMKGS 58
+G+G G+RG +G D G +G D+G + + D G +G D G RG
Sbjct: 80 RGRGGGFRGGDRGGFRGGDRGGSPWRGGDRGNF--RGGDRGGSPWRGGDRGVANRGRGDF 137
Query: 59 DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G RG G++ RG RG G+D RG +G+
Sbjct: 138 SGGSRG--GNKFSPRGGGRGGFTPRGRGGNDFSPRGGRGN 175
>UNIPROTKB|F1NA18 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:AADN02017974 EMBL:AADN02017975
IPI:IPI00820205 Ensembl:ENSGALT00000036551 Uniprot:F1NA18
Length = 979
Score = 111 (44.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKG 57
M G KG +G+ G+ GS G + G +G +K S +GE G+ G+ G G G
Sbjct: 148 MPGPKGDKGSQGQPGVPGS-VGLPGLPGP-QGSVGLKGSAGAKGEMGVMGTP-GLPGTPG 204
Query: 58 SDEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G+RG+ G E+G +G+KG +GE G KG D+GE G G
Sbjct: 205 P-VGDRGLPG-EKGSQGLKGVVGPQGEPGVKG-DKGEAGLPG 243
Score = 110 (43.8 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 37/105 (35%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG----SDKGEYVMKSSDEGERGMKGS--DEGERGMKG 57
KG +GE G+KG D+G+ + G D + V +G+ G KG GE+G++G
Sbjct: 221 KGVVGPQGEPGVKG-DKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLGPTGEKGLRG 279
Query: 58 SDEGERGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGS 98
+ GE G+ G +GE G G +G++G G D G G KGS
Sbjct: 280 -EYGEPGIPG-RDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGS 322
>WB|WBGene00000737 [details] [associations]
symbol:col-164 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002486
SMART:SM01088 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
GO:GO:0042302 EMBL:FO081431 PIR:T29773 RefSeq:NP_508386.1
ProteinModelPortal:Q22651 STRING:Q22651 PaxDb:Q22651
EnsemblMetazoa:T21D9.1 GeneID:180523 KEGG:cel:CELE_T21D9.1
UCSC:T21D9.1 CTD:180523 WormBase:T21D9.1
GeneTree:ENSGT00690000102744 HOGENOM:HOG000020172 InParanoid:Q22651
OMA:EDAAYCP NextBio:909730 Uniprot:Q22651
Length = 396
Score = 106 (42.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 37/108 (34%), Positives = 55/108 (50%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSD------EGERGMKGSDEGERGM 55
KG S GE G G+D GK GS++ + ++ D G G+ G +G+RG
Sbjct: 109 KGESGSAGEPGTDGTDGTPGKDGADGSNE-QTASQAGDLCTACPAGPPGVAGY-KGKRGP 166
Query: 56 KGSDEGERGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGSD 99
+G ++G++G G+ G G G D EG+ G G GE+GT G+D
Sbjct: 167 RG-EKGDKGAPGNA-GRDGAPGDDGPEGDHGHPGPMGPAGEKGTSGAD 212
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 36/100 (36%), Positives = 48/100 (48%)
Query: 4 KGRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+ GE+G KG+ + G+ G D E D G G G GE+G G+D G
Sbjct: 161 KGKRGPRGEKGDKGAPGNAGRDGAPGDDGPE-----GDHGHPGPMGP-AGEKGTSGAD-G 213
Query: 62 ERGMKGSE--EGERGMKG--SDEGERGTKGSDEGERGTKG 97
+ KG+ +G GM G DEG G +G D G G +G
Sbjct: 214 KGFAKGAPGPKGPTGMDGLAGDEGLPGERGED-GSAGAQG 252
>MGI|MGI:3505689 [details] [associations]
symbol:Cdsn "corneodesmosin" species:10090 "Mus musculus"
[GO:0005576 "extracellular region" evidence=IEA] [GO:0030057
"desmosome" evidence=ISO] [GO:0043589 "skin morphogenesis"
evidence=ISO] InterPro:IPR026087 MGI:MGI:3505689 GO:GO:0005576
EMBL:CR974473 CTD:1041 eggNOG:NOG29522 HOVERGEN:HBG081074
OrthoDB:EOG4G4GRC GO:GO:0043589 PANTHER:PTHR23207
HOGENOM:HOG000168434 EMBL:BC055373 IPI:IPI00380389
RefSeq:NP_001008424.2 UniGene:Mm.426664 ProteinModelPortal:Q7TPC1
STRING:Q7TPC1 PRIDE:Q7TPC1 Ensembl:ENSMUST00000044804 GeneID:386463
KEGG:mmu:386463 UCSC:uc008cia.1 GeneTree:ENSGT00660000095569
InParanoid:Q7TPC1 OMA:CPPITSV ChiTaRS:CDSN NextBio:405480
Bgee:Q7TPC1 CleanEx:MM_CDSN Genevestigator:Q7TPC1
GermOnline:ENSMUSG00000039518 Uniprot:Q7TPC1
Length = 561
Score = 108 (43.1 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 31/97 (31%), Positives = 43/97 (44%)
Query: 7 SVHEGERGMKGSDEGKYVMK-GSDKGEYVMKSSDEGER-GMKGSDEGERGMK-GSDEGER 63
S H G +GS G + K G+ + G R G GS G G + GS +
Sbjct: 84 SSHGGSSSSQGSSSGSLIYKPGTGYSQSSYSYGSGGSRPGGSGSQSGSSGSQSGSSGSQS 143
Query: 64 GMKGSEEGERGMK-GSDEGERGTKGSDEGERGTK-GS 98
G GS+ G G + GS + G+ GS G G++ GS
Sbjct: 144 GSSGSQSGSSGSQSGSSGSQSGSSGSQSGSSGSQSGS 180
>UNIPROTKB|F1S571 [details] [associations]
symbol:COL11A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006029 "proteoglycan metabolic
process" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0007601 GO:GO:0030199 GO:GO:0042472 GO:GO:0050910
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0001502
GO:GO:0048704 GO:GO:0006029 GO:GO:0055010 GO:GO:0005201
GO:GO:0002063 GeneTree:ENSGT00700000104155 OMA:HPGKEGQ
EMBL:CU234129 Ensembl:ENSSSCT00000007510 Uniprot:F1S571
Length = 1607
Score = 113 (44.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 783 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGVSGKD-GPAGLRGFP-GERGLPGA 838
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 839 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 868
Score = 113 (44.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 559 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 607
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 608 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 636
Score = 104 (41.7 bits), Expect = 0.00031, P = 0.00031
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD-----EGER 63
G+RG G+D G+ + GE K D G G+ G D+G RG +G GE
Sbjct: 378 GKRGRPGADGGRGM-----PGEPGAKG-DRGFDGLPGLPGDKGHRGERGPQGPPGPPGED 431
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 432 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 462
Score = 103 (41.3 bits), Expect = 0.00040, P = 0.00039
Identities = 41/99 (41%), Positives = 48/99 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDE 60
GR + GE G KG D G + G DKG GERG +G GE GM+G D
Sbjct: 388 GRGM-PGEPGAKG-DRGFDGLPGLPGDKGH-------RGERGPQGPPGPPGEDGMRGED- 437
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G GE G +G G RGT G G+ G G D
Sbjct: 438 GEIGPRGLP-GEAGPRGL-LGPRGTPGPT-GQPGIAGVD 473
>UNIPROTKB|F1Q133 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:FAPTGEK EMBL:AAEX03013382
EMBL:AAEX03013383 Ensembl:ENSCAFT00000009808 Uniprot:F1Q133
Length = 1623
Score = 113 (44.8 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 41/106 (38%), Positives = 48/106 (45%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--E 60
KG +GE+G KG + G M G +KGE G RG G D GE+G KGS
Sbjct: 206 KGDFATKGEKGQKG-EPGFQGMPGVGEKGE----PGKPGPRGKPGKD-GEKGEKGSPGFP 259
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKGSDDY 101
G+ G G G G KG D+GE G G G G KG Y
Sbjct: 260 GDSGYPGLP-GREGFKG-DKGEAGPPGPPGIAIGPGPLGEKGERGY 303
Score = 103 (41.3 bits), Expect = 0.00040, P = 0.00040
Identities = 38/105 (36%), Positives = 49/105 (46%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGS-------DKGEYVMKSSDEGERGMKG--SDEGERGM 55
G S G+ G KG D+G + G D G + D+GE+G G D+G RG
Sbjct: 866 GSSGPRGDPGFKG-DKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGPTGDKGSRGD 924
Query: 56 KGSD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G+ G+ G G G+ G KG D G GT G+ G G KGS
Sbjct: 925 PGTPGVPGKDGQAG-HPGQPGPKG-DPGIGGTPGAP-GLPGPKGS 966
>UNIPROTKB|F1PD39 [details] [associations]
symbol:COL11A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 SMART:SM00210
GeneTree:ENSGT00700000104155 EMBL:AAEX03004759
Ensembl:ENSCAFT00000031806 Uniprot:F1PD39
Length = 1655
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 831 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGISGKD-GPAGLRGFP-GERGLPGA 886
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 887 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 916
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 607 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 655
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 656 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 684
Score = 104 (41.7 bits), Expect = 0.00032, P = 0.00032
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD-----EGER 63
G+RG G+D G+ + GE K D G G+ G D+G RG +G GE
Sbjct: 426 GKRGRPGADGGRGM-----PGEPGAKG-DRGFDGLPGLPGDKGHRGERGPQGPPGPPGED 479
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 480 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 510
Score = 103 (41.3 bits), Expect = 0.00041, P = 0.00041
Identities = 41/99 (41%), Positives = 48/99 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDE 60
GR + GE G KG D G + G DKG GERG +G GE GM+G D
Sbjct: 436 GRGM-PGEPGAKG-DRGFDGLPGLPGDKGH-------RGERGPQGPPGPPGEDGMRGED- 485
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G GE G +G G RGT G G+ G G D
Sbjct: 486 GEIGPRGLP-GEAGPRGL-LGPRGTPGPT-GQPGIAGVD 521
>UNIPROTKB|F1MA59 [details] [associations]
symbol:Col4a1 "Protein Col4a1" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005587 "collagen type IV"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] InterPro:IPR001442 Pfam:PF01413
PROSITE:PS51403 SMART:SM00111 RGD:1307148 GO:GO:0007528
InterPro:IPR016187 SUPFAM:SSF56436 InterPro:IPR008160 Pfam:PF01391
GO:GO:0071230 GO:GO:0005201 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 KO:K06237 CTD:1282 IPI:IPI00780087
RefSeq:NP_001128481.1 UniGene:Rn.53801 PRIDE:F1MA59
Ensembl:ENSRNOT00000057386 GeneID:290905 KEGG:rno:290905
NextBio:631815 ArrayExpress:F1MA59 Uniprot:F1MA59
Length = 1669
Score = 113 (44.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 41/113 (36%), Positives = 58/113 (51%)
Query: 3 GK-GRSVHEGERGMKGSDEGKYVMKGSD-----KGEY--VMKSSDEGERGMKGSDEGERG 54
GK G++ H G+ G KG D G + GS KG + GE+G+ G G +G
Sbjct: 978 GKDGQAGHPGQPGPKG-DPGLSGIPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIP-GSQG 1035
Query: 55 MKGSDEGERGMKGSEEGERGMKG-------SDEGERGTKG--SDEGERGTKGS 98
+ GS GE+G KG E+G+ G+ G D+G++G G GE+G KGS
Sbjct: 1036 VPGSP-GEKGAKG-EKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPGEKGEKGS 1086
Score = 110 (43.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 40/107 (37%), Positives = 53/107 (49%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVM-----KSSDEGERGMKGSD--EGE 52
+K KG GE+G KG + G G +KGE K +GE+G KGS GE
Sbjct: 248 VKEKGDFAPTGEKGQKG-EPGFQGTPGYGEKGEPGKPGPRGKPGKDGEKGEKGSPGFPGE 306
Query: 53 RGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKG-SDEGERGTKGS 98
G G G +G +G E+GE G+ G GT+ ++GERG GS
Sbjct: 307 SGYPGLP-GRQGPQG-EKGEPGLPGPPGTVVGTRPLGEKGERGYPGS 351
Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
Identities = 40/104 (38%), Positives = 48/104 (46%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGS----DKGEYVMKSSDEGERGMKG--SDEGERGMK 56
G S G+ G KG D G M GS D G + D+GE+G G D+G RG
Sbjct: 912 GSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDP 971
Query: 57 GSD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G+ G+ G G G+ G KG D G G GS G G KGS
Sbjct: 972 GTPGVPGKDGQAG-HPGQPGPKG-DPGLSGIPGSP-GLPGPKGS 1012
Score = 100 (40.3 bits), Expect = 0.00086, P = 0.00086
Identities = 36/98 (36%), Positives = 50/98 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSDEGE 62
G H G G+ G ++G + G D G +K GE G+ G+ G G KG + G
Sbjct: 1103 GNIGHPGSPGLPG-EKGDKGLPGLD-GVPGVK----GEAGLPGTPGPTGPAGQKG-EPGS 1155
Query: 63 RGMKGS--EEGERGMKGSD-EGERGTKGSDEGERGTKG 97
G+ GS E+GE+G+ G G GTKG D+G +G G
Sbjct: 1156 DGIPGSAGEKGEQGLPGRGFPGFPGTKG-DKGSKGEVG 1192
>UNIPROTKB|F1LRJ1 [details] [associations]
symbol:Col4a3 "Protein Col4a3" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403 SMART:SM00111
RGD:71085 GO:GO:0006917 GO:GO:0008283 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0006919 GO:GO:0007166 InterPro:IPR008160
Pfam:PF01391 GO:GO:0016525 GO:GO:0005201 GO:GO:0005587
Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772 KO:K06237 CTD:1285
GO:GO:0032836 IPI:IPI00367109 RefSeq:NP_001129231.1
UniGene:Rn.121139 Ensembl:ENSRNOT00000020669 GeneID:363265
KEGG:rno:363265 NextBio:683046 ArrayExpress:F1LRJ1 Uniprot:F1LRJ1
Length = 1670
Score = 113 (44.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/104 (40%), Positives = 54/104 (51%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYV--MKGSDKGEYVMKS--SDEGERGMKGSDEGERGM 55
+KG +GR +GERG KG + +KG DKGE +K + GE+G +G+ G G
Sbjct: 922 VKGERGRPGVKGERGEKGKPGPPHAPHLKG-DKGEPGLKGFVGNPGEKGNRGNP-GLPGP 979
Query: 56 KGSDEGERGMKGSEEGERGMKGS--DEGERGTKGSDEGERGTKG 97
KG EG G+ GS G RG GS D G G +G G G G
Sbjct: 980 KGL-EGVPGLPGSP-GPRGDTGSSGDPGRPGPQGLP-GSMGNMG 1020
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 40/108 (37%), Positives = 53/108 (49%)
Query: 2 KGK-GRSV--HEGERGMKG--SDEGK-----YVMKGS-DKGEYVMKSSDEGERGMKGSDE 50
KG+ G S EGE+G+KG G + ++ K ++ + DEGERG G
Sbjct: 215 KGRMGDSTIGQEGEKGVKGLTGPPGLPGPVIFTLRHPYRKSDFQGQKGDEGERGEPGPP- 273
Query: 51 GERGMKGSDEG-ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G G G E+G G E G RG G D G G G+ EG +GT+G
Sbjct: 274 GPSGPPGDSYGSEKGAPG-EPGPRGKPGKD-GAPGFPGT-EGAKGTRG 318
>UNIPROTKB|A6QP79 [details] [associations]
symbol:COLEC12 "Collectin-12" species:9913 "Bos taurus"
[GO:0006910 "phagocytosis, recognition" evidence=ISS] [GO:0030169
"low-density lipoprotein particle binding" evidence=ISS]
[GO:0008329 "pattern recognition receptor activity" evidence=ISS]
[GO:0006955 "immune response" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005581 "collagen" evidence=IEA] [GO:0030246
"carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 GO:GO:0016021
GO:GO:0006955 GO:GO:0046872 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR018378 GO:GO:0030169 GO:GO:0008329 GO:GO:0006910
EMBL:BC149193 IPI:IPI00866992 RefSeq:NP_001095313.1 UniGene:Bt.4492
ProteinModelPortal:A6QP79 SMR:A6QP79 STRING:A6QP79 PRIDE:A6QP79
Ensembl:ENSBTAT00000047455 GeneID:504741 KEGG:bta:504741 CTD:81035
eggNOG:NOG147335 GeneTree:ENSGT00700000104492 HOGENOM:HOG000111886
HOVERGEN:HBG107745 InParanoid:A6QP79 KO:K10062 OMA:NGCPPHW
OrthoDB:EOG4KH2TV NextBio:20866807 Uniprot:A6QP79
Length = 742
Score = 109 (43.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 38/97 (39%), Positives = 49/97 (50%)
Query: 11 GERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEGERGMK 66
G RG KG D G+ G +KG+ ++GE G G GERG G GERG K
Sbjct: 446 GPRGPKG-DRGQQGPPGPTGNKGQ----KGEKGEPGPPGP-AGERGPIGPVGPPGERGSK 499
Query: 67 GSE--EGERGMKGSDEGERGTKG--SDEGERGTKGSD 99
GS+ +G +G +GS G+ G +G D G G G D
Sbjct: 500 GSKGLQGSKGSRGSP-GKPGPQGPSGDPGPPGPPGKD 535
>UNIPROTKB|F1LLX1 [details] [associations]
symbol:Col11a1 "Collagen alpha-1(XI) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 GeneTree:ENSGT00700000104155
OMA:HPGKEGQ IPI:IPI00949317 Ensembl:ENSRNOT00000024138
ArrayExpress:F1LLX1 Uniprot:F1LLX1
Length = 1803
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 755 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 803
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 804 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 832
>RGD|2372 [details] [associations]
symbol:Col11a1 "collagen, type XI, alpha 1" species:10116 "Rattus
norvegicus" [GO:0001502 "cartilage condensation" evidence=ISO]
[GO:0001503 "ossification" evidence=IEP] [GO:0002063 "chondrocyte
development" evidence=ISO] [GO:0003007 "heart morphogenesis"
evidence=ISO] [GO:0005201 "extracellular matrix structural
constituent" evidence=TAS] [GO:0005581 "collagen" evidence=ISO]
[GO:0005592 "collagen type XI" evidence=ISO] [GO:0006029
"proteoglycan metabolic process" evidence=ISO] [GO:0007601 "visual
perception" evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0030199 "collagen fibril organization"
evidence=ISO;TAS] [GO:0031012 "extracellular matrix"
evidence=ISO;IDA] [GO:0035989 "tendon development" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0048704
"embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048705
"skeletal system morphogenesis" evidence=ISO] [GO:0050910 "detection
of mechanical stimulus involved in sensory perception of sound"
evidence=ISO] [GO:0051216 "cartilage development" evidence=ISO]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=ISO] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 RGD:2372 GO:GO:0046872 GO:GO:0007601
GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0050910
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0001502
GO:GO:0048704 GO:GO:0006029 GO:GO:0055010 Pfam:PF02210 GO:GO:0005201
GO:GO:0002063 HOGENOM:HOG000085654 KO:K06236 HOVERGEN:HBG103137
OrthoDB:EOG49GKHM SMART:SM00210 GeneTree:ENSGT00700000104155 CTD:1301
EMBL:AABR03012126 EMBL:AABR03013126 EMBL:AABR03014171
EMBL:AABR03015382 EMBL:AABR03015832 EMBL:AABR03016562
EMBL:AABR03017847 EMBL:AABR03017951 EMBL:AABR03018245
EMBL:AABR03019675 EMBL:AABR03023874 EMBL:U20116 EMBL:U20118
EMBL:U20121 IPI:IPI00189470 IPI:IPI00189494 IPI:IPI00325589
IPI:IPI00949317 IPI:IPI00959233 PIR:B31795 RefSeq:NP_037249.1
UniGene:Rn.260 IntAct:P20909 STRING:P20909 PhosphoSite:P20909
PRIDE:P20909 Ensembl:ENSRNOT00000023693 Ensembl:ENSRNOT00000068413
GeneID:25654 KEGG:rno:25654 UCSC:RGD:2372 InParanoid:P20909
NextBio:607535 ArrayExpress:P20909 Genevestigator:P20909
GermOnline:ENSRNOG00000023148 Uniprot:P20909
Length = 1804
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 756 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 804
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 805 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 833
Score = 105 (42.0 bits), Expect = 0.00027, P = 0.00027
Identities = 37/94 (39%), Positives = 50/94 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+GR +G RGM G + G +G D G + D+G RG +G +G G+ G D
Sbjct: 577 RGRPGADGGRGMPG-EPGSKGDRGFD-GLPGLPG-DKGHRGERGP-QGPPGLPGDD---- 628
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 629 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 659
>UNIPROTKB|P20909 [details] [associations]
symbol:Col11a1 "Collagen alpha-1(XI) chain" species:10116
"Rattus norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 RGD:2372
GO:GO:0046872 GO:GO:0007601 GO:GO:0030199 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472
GO:GO:0050910 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025
GO:GO:0001502 GO:GO:0048704 GO:GO:0006029 GO:GO:0055010
Pfam:PF02210 GO:GO:0005201 GO:GO:0002063 HOGENOM:HOG000085654
KO:K06236 HOVERGEN:HBG103137 OrthoDB:EOG49GKHM SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:1301 EMBL:AABR03012126
EMBL:AABR03013126 EMBL:AABR03014171 EMBL:AABR03015382
EMBL:AABR03015832 EMBL:AABR03016562 EMBL:AABR03017847
EMBL:AABR03017951 EMBL:AABR03018245 EMBL:AABR03019675
EMBL:AABR03023874 EMBL:U20116 EMBL:U20118 EMBL:U20121
IPI:IPI00189470 IPI:IPI00189494 IPI:IPI00325589 IPI:IPI00949317
IPI:IPI00959233 PIR:B31795 RefSeq:NP_037249.1 UniGene:Rn.260
IntAct:P20909 STRING:P20909 PhosphoSite:P20909 PRIDE:P20909
Ensembl:ENSRNOT00000023693 Ensembl:ENSRNOT00000068413 GeneID:25654
KEGG:rno:25654 UCSC:RGD:2372 InParanoid:P20909 NextBio:607535
ArrayExpress:P20909 Genevestigator:P20909
GermOnline:ENSRNOG00000023148 Uniprot:P20909
Length = 1804
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 756 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 804
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 805 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 833
Score = 105 (42.0 bits), Expect = 0.00027, P = 0.00027
Identities = 37/94 (39%), Positives = 50/94 (53%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+GR +G RGM G + G +G D G + D+G RG +G +G G+ G D
Sbjct: 577 RGRPGADGGRGMPG-EPGSKGDRGFD-GLPGLPG-DKGHRGERGP-QGPPGLPGDD---- 628
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 629 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 659
>UNIPROTKB|F1PD36 [details] [associations]
symbol:COL11A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050910 "detection of
mechanical stimulus involved in sensory perception of sound"
evidence=IEA] [GO:0048704 "embryonic skeletal system morphogenesis"
evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0006029
"proteoglycan metabolic process" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0002063 "chondrocyte development"
evidence=IEA] [GO:0001502 "cartilage condensation" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 GO:GO:0007601 GO:GO:0030199
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0050910 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
GO:GO:0001502 GO:GO:0048704 GO:GO:0006029 GO:GO:0055010
Pfam:PF02210 GO:GO:0005201 GO:GO:0002063 SMART:SM00210
GeneTree:ENSGT00700000104155 EMBL:AAEX03004759
Ensembl:ENSCAFT00000031809 Uniprot:F1PD36
Length = 1805
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 981 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGISGKD-GPAGLRGFP-GERGLPGA 1036
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 1037 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 1066
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 757 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 805
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 806 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 834
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD-----EGER 63
G+RG G+D G+ + GE K D G G+ G D+G RG +G GE
Sbjct: 576 GKRGRPGADGGRGM-----PGEPGAKG-DRGFDGLPGLPGDKGHRGERGPQGPPGPPGED 629
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 630 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 660
Score = 103 (41.3 bits), Expect = 0.00045, P = 0.00045
Identities = 41/99 (41%), Positives = 48/99 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDE 60
GR + GE G KG D G + G DKG GERG +G GE GM+G D
Sbjct: 586 GRGM-PGEPGAKG-DRGFDGLPGLPGDKGH-------RGERGPQGPPGPPGEDGMRGED- 635
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G GE G +G G RGT G G+ G G D
Sbjct: 636 GEIGPRGLP-GEAGPRGL-LGPRGTPGPT-GQPGIAGVD 671
>UNIPROTKB|J9NYK4 [details] [associations]
symbol:COL11A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 SMART:SM00210
GeneTree:ENSGT00700000104155 OMA:HPGKEGQ EMBL:AAEX03004759
Ensembl:ENSCAFT00000043301 Uniprot:J9NYK4
Length = 1806
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 982 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGISGKD-GPAGLRGFP-GERGLPGA 1037
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 1038 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 1067
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 758 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 806
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 807 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 835
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 37/94 (39%), Positives = 48/94 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD-----EGER 63
G+RG G+D G+ + GE K D G G+ G D+G RG +G GE
Sbjct: 577 GKRGRPGADGGRGM-----PGEPGAKG-DRGFDGLPGLPGDKGHRGERGPQGPPGPPGED 630
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
GM+G E+GE G +G GE G +G G RGT G
Sbjct: 631 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 661
Score = 103 (41.3 bits), Expect = 0.00045, P = 0.00045
Identities = 41/99 (41%), Positives = 48/99 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDE 60
GR + GE G KG D G + G DKG GERG +G GE GM+G D
Sbjct: 587 GRGM-PGEPGAKG-DRGFDGLPGLPGDKGH-------RGERGPQGPPGPPGEDGMRGED- 636
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G GE G +G G RGT G G+ G G D
Sbjct: 637 GEIGPRGLP-GEAGPRGL-LGPRGTPGPT-GQPGIAGVD 672
>UNIPROTKB|P12107 [details] [associations]
symbol:COL11A1 "Collagen alpha-1(XI) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0001502 "cartilage condensation" evidence=IEA] [GO:0002063
"chondrocyte development" evidence=IEA] [GO:0006029 "proteoglycan
metabolic process" evidence=IEA] [GO:0042472 "inner ear
morphogenesis" evidence=IEA] [GO:0048704 "embryonic skeletal system
morphogenesis" evidence=IEA] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=NAS]
[GO:0005592 "collagen type XI" evidence=IDA;NAS] [GO:0030198
"extracellular matrix organization" evidence=NAS;TAS] [GO:0030674
"protein binding, bridging" evidence=NAS] [GO:0007601 "visual
perception" evidence=IMP] [GO:0007605 "sensory perception of sound"
evidence=IMP] [GO:0050910 "detection of mechanical stimulus
involved in sensory perception of sound" evidence=IMP] [GO:0030199
"collagen fibril organization" evidence=NAS] [GO:0050840
"extracellular matrix binding" evidence=NAS] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 Reactome:REACT_118779
GO:GO:0046872 GO:GO:0007601 GO:GO:0030199 GO:GO:0030674
EMBL:CH471097 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0042472
GO:GO:0050910 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 SMART:SM00282 PROSITE:PS50025 GO:GO:0001502
GO:GO:0048704 GO:GO:0001503 GO:GO:0050840 GO:GO:0006029
GO:GO:0055010 Pfam:PF02210 GO:GO:0005201 GO:GO:0002063
HOVERGEN:HBG004933 KO:K06236 OrthoDB:EOG49GKHM SMART:SM00210
EMBL:J04177 EMBL:AF101112 EMBL:AF101079 EMBL:AF101080 EMBL:AF101081
EMBL:AF101082 EMBL:AF101083 EMBL:AF101084 EMBL:AF101085
EMBL:AF101086 EMBL:AF101087 EMBL:AF101088 EMBL:AF101089
EMBL:AF101090 EMBL:AF101091 EMBL:AF101092 EMBL:AF101093
EMBL:AF101094 EMBL:AF101095 EMBL:AF101096 EMBL:AF101097
EMBL:AF101098 EMBL:AF101099 EMBL:AF101100 EMBL:AF101101
EMBL:AF101102 EMBL:AF101103 EMBL:AF101104 EMBL:AF101105
EMBL:AF101106 EMBL:AF101107 EMBL:AF101108 EMBL:AF101109
EMBL:AF101110 EMBL:AF101111 EMBL:AL627203 EMBL:AC093150
EMBL:AC099567 EMBL:L38956 IPI:IPI00218539 IPI:IPI00218540
IPI:IPI00295575 PIR:A35239 RefSeq:NP_001177638.1 RefSeq:NP_001845.3
RefSeq:NP_542196.2 UniGene:Hs.523446 ProteinModelPortal:P12107
SMR:P12107 STRING:P12107 PhosphoSite:P12107 DMDM:215274245
PaxDb:P12107 PRIDE:P12107 Ensembl:ENST00000353414
Ensembl:ENST00000358392 Ensembl:ENST00000370096 GeneID:1301
KEGG:hsa:1301 UCSC:uc001dul.3 UCSC:uc001dum.3 UCSC:uc001dun.3
CTD:1301 GeneCards:GC01M103342 H-InvDB:HIX0028847 HGNC:HGNC:2186
MIM:120280 MIM:154780 MIM:228520 MIM:604841 neXtProt:NX_P12107
Orphanet:2021 Orphanet:560 Orphanet:90654 PharmGKB:PA26702
OMA:HPGKEGQ GenomeRNAi:1301 NextBio:5283 PMAP-CutDB:B1ASK7
ArrayExpress:P12107 Bgee:P12107 CleanEx:HS_COL11A1
Genevestigator:P12107 GermOnline:ENSG00000060718 GO:GO:0005592
Uniprot:P12107
Length = 1806
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 982 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGISGKD-GPAGLRGFP-GERGLPGA 1037
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 1038 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 1067
Score = 112 (44.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 758 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQIGP 806
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 807 RGEDGPEGPKGR-AGPTGDPGPS-GQAGEKG 835
Score = 102 (41.0 bits), Expect = 0.00057, P = 0.00057
Identities = 36/95 (37%), Positives = 49/95 (51%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGSD-----EGER 63
G+RG G+D G+ + GE K D G G+ G D+G RG +G G+
Sbjct: 577 GKRGRPGADGGRGM-----PGEPGAKG-DRGFDGLPGLPGDKGHRGERGPQGPPGPPGDD 630
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GM+G E+GE G +G GE G +G G RGT G+
Sbjct: 631 GMRG-EDGEIGPRGLP-GEAGPRGL-LGPRGTPGA 662
Score = 102 (41.0 bits), Expect = 0.00057, P = 0.00057
Identities = 40/99 (40%), Positives = 49/99 (49%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKG--SDEGERGMKGSDE 60
GR + GE G KG D G + G DKG GERG +G G+ GM+G D
Sbjct: 587 GRGM-PGEPGAKG-DRGFDGLPGLPGDKGH-------RGERGPQGPPGPPGDDGMRGED- 636
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G GE G +G G RGT G+ G+ G G D
Sbjct: 637 GEIGPRGLP-GEAGPRGL-LGPRGTPGAP-GQPGMAGVD 672
>UNIPROTKB|F1N0K0 [details] [associations]
symbol:COL11A1 "Collagen alpha-1(XI) chain" species:9913
"Bos taurus" [GO:0055010 "ventricular cardiac muscle tissue
morphogenesis" evidence=IEA] [GO:0050910 "detection of mechanical
stimulus involved in sensory perception of sound" evidence=IEA]
[GO:0048704 "embryonic skeletal system morphogenesis" evidence=IEA]
[GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006029 "proteoglycan metabolic
process" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
[GO:0002063 "chondrocyte development" evidence=IEA] [GO:0001502
"cartilage condensation" evidence=IEA] [GO:0005201 "extracellular
matrix structural constituent" evidence=IEA] InterPro:IPR000885
Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461 SMART:SM00038
GO:GO:0007601 GO:GO:0030199 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0042472 GO:GO:0050910
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791
SMART:SM00282 GO:GO:0001502 GO:GO:0048704 GO:GO:0006029
GO:GO:0055010 Pfam:PF02210 GO:GO:0005201 GO:GO:0002063
SMART:SM00210 GeneTree:ENSGT00700000104155 OMA:HPGKEGQ
EMBL:DAAA02007697 EMBL:DAAA02007698 EMBL:DAAA02007699
EMBL:DAAA02007700 EMBL:DAAA02007701 EMBL:DAAA02007702
EMBL:DAAA02007703 EMBL:DAAA02007704 EMBL:DAAA02007705
EMBL:DAAA02007706 EMBL:DAAA02007707 IPI:IPI00905045
Ensembl:ENSBTAT00000028276 Uniprot:F1N0K0
Length = 1816
Score = 113 (44.8 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 35/92 (38%), Positives = 50/92 (54%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G +G+ G D G G++G GERG+ G+
Sbjct: 992 GERGHPGPPGPPGEQGLPGA-AGKEGAKG-DPGPQGVSGKD-GPAGLRGFP-GERGLPGA 1047
Query: 69 EEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+ G G+KG EG +G G GERG+ G+
Sbjct: 1048 Q-GAPGLKGG-EGPQGPPGPVGSPGERGSAGT 1077
Score = 112 (44.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 38/91 (41%), Positives = 48/91 (52%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG- 67
+ G RG+KG+D G +KGS KGE +GE G G +G+ G+KG D GE G G
Sbjct: 769 YPGPRGVKGAD-GVRGLKGS-KGE-------KGEDGFPGF-KGDMGLKG-DRGEVGQVGP 817
Query: 68 -SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
E+G G KG G G G G+ G KG
Sbjct: 818 RGEDGPEGPKGR-AGPTGDPGPP-GQAGEKG 846
Score = 104 (41.7 bits), Expect = 0.00035, P = 0.00035
Identities = 39/99 (39%), Positives = 48/99 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSS-DEGERGMKG--SDEGERGMKGSDE 60
+GR +G RGM G D G +G D V GERG +G GE G++G D
Sbjct: 590 RGRPGADGGRGMPG-DPGATGDRGFDGLPGVAGDKCHRGERGPQGPPGPPGEDGIRGED- 647
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GE G +G GE G +G G RGT G G+ G G D
Sbjct: 648 GEIGPRGLP-GEAGPRGL-LGPRGTPGPI-GQPGIAGVD 683
Score = 103 (41.3 bits), Expect = 0.00045, P = 0.00045
Identities = 37/91 (40%), Positives = 48/91 (52%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKG--SDEGERGMK 66
G+RG G+D G+ M G D G + D G G+ G GERG +G GE G++
Sbjct: 588 GKRGRPGADGGRG-MPG-DPGATGDRGFD-GLPGVAGDKCHRGERGPQGPPGPPGEDGIR 644
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G E+GE G +G GE G +G G RGT G
Sbjct: 645 G-EDGEIGPRGLP-GEAGPRGL-LGPRGTPG 672
>UNIPROTKB|Q9NR30 [details] [associations]
symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
Length = 783
Score = 109 (43.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 40 EGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
EG G +G EG RG +G +G R +G EG RG +G G G K + +G K S
Sbjct: 719 EGYGGFRGQREGSRGFRGQRDGNRRFRGQREGSRGPRGQRSGG-GNKSNRSQNKGQKRS 776
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 45 MKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
++G EG G +G EG RG +G +G R +G EG RG +G G G K +
Sbjct: 714 LEGPREGYGGFRGQREGSRGFRGQRDGNRRFRGQREGSRGPRGQRSGG-GNKSN 766
>UNIPROTKB|E2QTL6 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
NextBio:20852481 Uniprot:E2QTL6
Length = 785
Score = 109 (43.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 40 EGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGER 93
EG R +G EG RG +G EG RG +G EG R +G S G + + ++G++
Sbjct: 721 EGYRNFRGQREGSRGSRGQREGSRGFRGQREGNRSFRGQRSRGGNKNNRFQNKGQK 776
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 45 MKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
++G EG R +G EG RG +G EG RG +G EG R +G G K +
Sbjct: 716 LEGPREGYRNFRGQREGSRGSRGQREGSRGFRGQREGNRSFRGQ-RSRGGNKNN 768
>UNIPROTKB|F6V8G4 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
Length = 786
Score = 109 (43.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 40 EGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGER 93
EG R +G EG RG +G EG RG +G EG R +G S G + + ++G++
Sbjct: 722 EGYRNFRGQREGSRGSRGQREGSRGFRGQREGNRSFRGQRSRGGNKNNRFQNKGQK 777
Score = 106 (42.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 21/54 (38%), Positives = 28/54 (51%)
Query: 45 MKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
++G EG R +G EG RG +G EG RG +G EG R +G G K +
Sbjct: 717 LEGPREGYRNFRGQREGSRGSRGQREGSRGFRGQREGNRSFRGQ-RSRGGNKNN 769
>GENEDB_PFALCIPARUM|MAL13P1.75 [details] [associations]
symbol:MAL13P1.75 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] EMBL:AL844509 RefSeq:XP_001349883.1
ProteinModelPortal:Q8IEG8 EnsemblProtists:MAL13P1.75:mRNA
GeneID:813965 KEGG:pfa:MAL13P1.75 EuPathDB:PlasmoDB:PF3D7_1314700
ProtClustDB:CLSZ2515462 Uniprot:Q8IEG8
Length = 554
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 33/83 (39%), Positives = 39/83 (46%)
Query: 19 DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGS 78
+E KY+ K + E + KS GE S EGE S EGE S EGE S
Sbjct: 429 EEKKYMYKFFEGEENIAKSH-AGEENTGKSYEGEENTGKSYEGEENTGKSYEGEENTGKS 487
Query: 79 DEGERGTKGSDEGERGT-KGSDD 100
EGE T S+EGE T K +D
Sbjct: 488 YEGEENTGKSNEGEENTGKSYED 510
Score = 98 (39.6 bits), Expect = 0.00038, P = 0.00038
Identities = 35/93 (37%), Positives = 39/93 (41%)
Query: 4 KGRSVHEGERG-MKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
K V E E+ M EG+ + S GE S EGE S EGE S EGE
Sbjct: 422 KNNIVQEEEKKYMYKFFEGEENIAKSHAGEENTGKSYEGEENTGKSYEGEENTGKSYEGE 481
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGT 95
S EGE S+EGE T S E E T
Sbjct: 482 ENTGKSYEGEENTGKSNEGEENTGKSYEDEENT 514
>UNIPROTKB|Q8IEG8 [details] [associations]
symbol:MAL13P1.75 "Uncharacterized protein" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
EMBL:AL844509 RefSeq:XP_001349883.1 ProteinModelPortal:Q8IEG8
EnsemblProtists:MAL13P1.75:mRNA GeneID:813965 KEGG:pfa:MAL13P1.75
EuPathDB:PlasmoDB:PF3D7_1314700 ProtClustDB:CLSZ2515462
Uniprot:Q8IEG8
Length = 554
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 33/83 (39%), Positives = 39/83 (46%)
Query: 19 DEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGS 78
+E KY+ K + E + KS GE S EGE S EGE S EGE S
Sbjct: 429 EEKKYMYKFFEGEENIAKSH-AGEENTGKSYEGEENTGKSYEGEENTGKSYEGEENTGKS 487
Query: 79 DEGERGTKGSDEGERGT-KGSDD 100
EGE T S+EGE T K +D
Sbjct: 488 YEGEENTGKSNEGEENTGKSYED 510
Score = 98 (39.6 bits), Expect = 0.00038, P = 0.00038
Identities = 35/93 (37%), Positives = 39/93 (41%)
Query: 4 KGRSVHEGERG-MKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
K V E E+ M EG+ + S GE S EGE S EGE S EGE
Sbjct: 422 KNNIVQEEEKKYMYKFFEGEENIAKSHAGEENTGKSYEGEENTGKSYEGEENTGKSYEGE 481
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGT 95
S EGE S+EGE T S E E T
Sbjct: 482 ENTGKSYEGEENTGKSNEGEENTGKSYEDEENT 514
>UNIPROTKB|H0YHY3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:BX248309
ProteinModelPortal:H0YHY3 Ensembl:ENST00000548137 Bgee:H0YHY3
Uniprot:H0YHY3
Length = 1602
Score = 112 (44.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 403 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 455
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 456 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 488
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 582 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 637
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 638 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 669
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 806 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 861
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 862 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 891
Score = 101 (40.6 bits), Expect = 0.00064, P = 0.00064
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 595 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 653
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 654 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 695
>UNIPROTKB|H0Y6C5 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:BX248309
ProteinModelPortal:H0Y6C5 Ensembl:ENST00000443138 Uniprot:H0Y6C5
Length = 1623
Score = 112 (44.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 424 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 476
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 477 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 509
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 603 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 658
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 659 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 690
Score = 105 (42.0 bits), Expect = 0.00024, P = 0.00024
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 827 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 882
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 883 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 912
Score = 101 (40.6 bits), Expect = 0.00065, P = 0.00065
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 616 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 674
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 675 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 716
>TAIR|locus:2204400 [details] [associations]
symbol:AT1G76010 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR002775 Pfam:PF01918 EMBL:CP002684
GO:GO:0005829 GO:GO:0003676 EMBL:AF412102 EMBL:AY054208
EMBL:AF428441 EMBL:AY124847 IPI:IPI00531013 RefSeq:NP_565124.1
UniGene:At.24580 UniGene:At.67776 UniGene:At.75066 HSSP:P60849
ProteinModelPortal:Q93VA8 SMR:Q93VA8 STRING:Q93VA8 PRIDE:Q93VA8
EnsemblPlants:AT1G76010.1 GeneID:843932 KEGG:ath:AT1G76010
TAIR:At1g76010 HOGENOM:HOG000240806 InParanoid:Q93VA8 OMA:YDGPPQG
PhylomeDB:Q93VA8 ProtClustDB:CLSN2917456 Genevestigator:Q93VA8
Uniprot:Q93VA8
Length = 350
Score = 104 (41.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/99 (28%), Positives = 41/99 (41%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
+GR ++G +G G D +G+ G +G +G G G +G G G +G
Sbjct: 245 QGRGGYDGPQGRGGYDGPQGRRGYDGPPQGRGGYDGPSQGRGGYDGPSQGRGGYDGPSQG 304
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
G G + RG +G G RG G G+ G D
Sbjct: 305 RGGYDGPQGRGRG-RGRGRGGRGRGGGRGGDGGFNNRSD 342
Score = 97 (39.2 bits), Expect = 0.00025, P = 0.00025
Identities = 28/89 (31%), Positives = 35/89 (39%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
HE RG D G Y +G Y +G G G +G RG G +G G G
Sbjct: 229 HE-HRGY--DDRGGYDAPPQGRGGY---DGPQGRGGYDGP-QGRRGYDGPPQGRGGYDGP 281
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G G G +G G G +G G G
Sbjct: 282 SQGRGGYDGPSQGRGGYDGPSQGRGGYDG 310
>UNIPROTKB|E7EMX6 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI00894004 ProteinModelPortal:E7EMX6 Ensembl:ENST00000552134
ArrayExpress:E7EMX6 Uniprot:E7EMX6
Length = 1629
Score = 112 (44.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 430 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 482
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 483 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 515
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 609 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 664
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 665 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 696
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 833 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 888
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 889 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 918
Score = 101 (40.6 bits), Expect = 0.00065, P = 0.00065
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 622 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 680
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 681 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 722
>UNIPROTKB|H0YIS1 [details] [associations]
symbol:COL11A2 "Collagen, type XI, alpha 2, isoform CRA_c"
species:9606 "Homo sapiens" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 EMBL:CH471081 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 KO:K06236 SMART:SM00210 CTD:1302
EMBL:AL645940 EMBL:AL844527 EMBL:AL845446 EMBL:CR759733
EMBL:CR936877 UniGene:Hs.390171 GeneID:1302 KEGG:hsa:1302
HGNC:HGNC:2187 GenomeRNAi:1302 RefSeq:NP_542410.2
Ensembl:ENST00000361917 Ensembl:ENST00000549491
Ensembl:ENST00000550998 Ensembl:ENST00000552473 Uniprot:H0YIS1
Length = 1629
Score = 112 (44.5 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 430 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 482
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 483 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 515
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 609 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 664
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 665 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 696
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 833 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 888
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 889 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 918
Score = 101 (40.6 bits), Expect = 0.00065, P = 0.00065
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 622 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 680
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 681 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 722
>RGD|1306536 [details] [associations]
symbol:Rrbp1 "ribosome binding protein 1" species:10116 "Rattus
norvegicus" [GO:0005783 "endoplasmic reticulum" evidence=ISO]
RGD:1306536 GeneTree:ENSGT00530000063895 IPI:IPI00951128
PhosphoSite:F1M853 Ensembl:ENSRNOT00000055602 ArrayExpress:F1M853
Uniprot:F1M853
Length = 1324
Score = 111 (44.1 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 19/93 (20%), Positives = 53/93 (56%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G + K + ++G+ + ++G++G ++G++G ++G
Sbjct: 273 KGEGLQ-NQGKKGEATQKQDKKIEGAQNQGKKPEGTPNQGKKGEGAQNQGKKGEGAQNQG 331
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERG 94
++G +G++G ++G++G ++G++G
Sbjct: 332 KKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKG 364
Score = 108 (43.1 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 17/86 (19%), Positives = 50/86 (58%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
++G++G ++GK ++G+ + ++G++G ++G++G ++G++G
Sbjct: 309 NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQ 368
Query: 69 EEGERGMKGSDEGERGTKGSDEGERG 94
+G++G ++G++G ++G++G
Sbjct: 369 NQGKKGEGAQNQGKKGEGAQNQGKKG 394
Score = 99 (39.9 bits), Expect = 0.00085, P = 0.00085
Identities = 19/92 (20%), Positives = 52/92 (56%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KG+G ++G++G ++GK ++G+ + ++G++G ++G++G ++G
Sbjct: 323 KGEGAQ-NQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQGKKGEGAQNQG 381
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGER 93
++G +G++G +G ++G + +G++
Sbjct: 382 KKGEGAQNQGKKG-EGQNQGRKAEGTPAQGKK 412
>UNIPROTKB|B0UXE9 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 HOVERGEN:HBG004933 SMART:SM00210 HGNC:HGNC:2187
OrthoDB:EOG4BRWM8 EMBL:CR354565 IPI:IPI01021833
Ensembl:ENST00000425729 Uniprot:B0UXE9
Length = 1650
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 451 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 503
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 504 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 536
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 630 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 685
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 686 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 717
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 854 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 909
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 910 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 939
Score = 101 (40.6 bits), Expect = 0.00066, P = 0.00066
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 643 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 701
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 702 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 743
>UNIPROTKB|Q4VXY6 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0001503 "ossification" evidence=IEA] [GO:0001894 "tissue
homeostasis" evidence=IEA] [GO:0002062 "chondrocyte
differentiation" evidence=IEA] [GO:0005592 "collagen type XI"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 GO:GO:0005840 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
EMBL:AL031228 Pfam:PF02210 GO:GO:0005201 KO:K06236 SMART:SM00210
CTD:1302 EMBL:AL645940 EMBL:AL844527 EMBL:AL845446 EMBL:CR759733
EMBL:CR936877 RefSeq:NP_542412.2 UniGene:Hs.390171 GeneID:1302
KEGG:hsa:1302 HGNC:HGNC:2187 ProteinModelPortal:Q4VXY6
Ensembl:ENST00000374708 Ensembl:ENST00000383219
Ensembl:ENST00000447349 Ensembl:ENST00000448717 Uniprot:Q4VXY6
Length = 1650
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 451 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 503
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 504 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 536
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 630 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 685
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 686 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 717
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 854 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 909
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 910 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 939
Score = 101 (40.6 bits), Expect = 0.00066, P = 0.00066
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 643 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 701
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 702 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 743
>UNIPROTKB|E7ERP3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01021463 ProteinModelPortal:E7ERP3 Ensembl:ENST00000551262
ArrayExpress:E7ERP3 Uniprot:E7ERP3
Length = 1655
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 456 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 508
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 509 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 541
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 635 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 690
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 691 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 722
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 859 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 914
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 915 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 944
Score = 101 (40.6 bits), Expect = 0.00067, P = 0.00067
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 648 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 706
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 707 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 748
>UNIPROTKB|E7ETH3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI01021679
Ensembl:ENST00000547561 Ensembl:ENST00000553210 Uniprot:E7ETH3
Length = 1655
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 456 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 508
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 509 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 541
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 635 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 690
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 691 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 722
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 859 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 914
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 915 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 944
Score = 101 (40.6 bits), Expect = 0.00067, P = 0.00067
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 648 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 706
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 707 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 748
>UNIPROTKB|H0Y3B3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:CR759733
HGNC:HGNC:2187 Ensembl:ENST00000374712 Ensembl:ENST00000551572
Uniprot:H0Y3B3
Length = 1655
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 456 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 508
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 509 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 541
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 635 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 690
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 691 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 722
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 859 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 914
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 915 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 944
Score = 101 (40.6 bits), Expect = 0.00067, P = 0.00067
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 648 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 706
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 707 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 748
>MGI|MGI:88454 [details] [associations]
symbol:Col4a1 "collagen, type IV, alpha 1" species:10090 "Mus
musculus" [GO:0001525 "angiogenesis" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0005587 "collagen type IV"
evidence=IDA] [GO:0005604 "basement membrane" evidence=IDA]
[GO:0007528 "neuromuscular junction development" evidence=IMP]
[GO:0048407 "platelet-derived growth factor binding" evidence=ISO]
[GO:0071230 "cellular response to amino acid stimulus"
evidence=IDA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 MGI:MGI:88454 GO:GO:0007528 InterPro:IPR016187
SUPFAM:SSF56436 GO:GO:0001525 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 GO:GO:0071230 GO:GO:0030855 GO:GO:0005201
HOVERGEN:HBG004933 OrthoDB:EOG45DWPF GO:GO:0005587
Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772 KO:K06237 CTD:1282
EMBL:J04694 EMBL:AK142097 EMBL:AK146487 EMBL:AK147284 EMBL:AK147355
EMBL:AK147661 EMBL:BC002269 EMBL:BC056620 EMBL:BC072650 EMBL:X06777
EMBL:J03758 EMBL:J03944 EMBL:J04448 EMBL:M23333 EMBL:M12879
EMBL:M13024 EMBL:M13025 EMBL:M13026 EMBL:M13027 EMBL:M13043
EMBL:M14042 EMBL:X02201 EMBL:M15832 IPI:IPI00109588 PIR:A33525
RefSeq:NP_034061.2 UniGene:Mm.738 ProteinModelPortal:P02463
SMR:P02463 STRING:P02463 PhosphoSite:P02463 PaxDb:P02463
PRIDE:P02463 Ensembl:ENSMUST00000033898 GeneID:12826 KEGG:mmu:12826
UCSC:uc009kvb.2 InParanoid:P02463 OMA:FAPTGEK NextBio:282314
Bgee:P02463 CleanEx:MM_COL4A1 Genevestigator:P02463
GermOnline:ENSMUSG00000031502 Uniprot:P02463
Length = 1669
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/104 (39%), Positives = 49/104 (47%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGS----DKGEYVMKSSDEGERGMKG--SDEGERGMK 56
G S G+ G KG D G M GS D G + D+GE+G G D+G RG
Sbjct: 912 GSSGPRGDPGFKGDKGDVGLPGMPGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDP 971
Query: 57 GSD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G+ G+ G G G+ G KG D G GT GS G G KGS
Sbjct: 972 GTPGVPGKDGQAG-HPGQPGPKG-DPGLSGTPGSP-GLPGPKGS 1012
Score = 111 (44.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 41/113 (36%), Positives = 57/113 (50%)
Query: 3 GK-GRSVHEGERGMKGSDEGKYVMKGSD-----KGEY--VMKSSDEGERGMKGSDEGERG 54
GK G++ H G+ G KG D G GS KG + GE+G+ G G +G
Sbjct: 978 GKDGQAGHPGQPGPKG-DPGLSGTPGSPGLPGPKGSVGGMGLPGSPGEKGVPGIP-GSQG 1035
Query: 55 MKGSDEGERGMKGSEEGERGMKG-------SDEGERGTKG--SDEGERGTKGS 98
+ GS GE+G KG E+G+ G+ G D+G++G G GE+G KGS
Sbjct: 1036 VPGSP-GEKGAKG-EKGQSGLPGIGIPGRPGDKGDQGLAGFPGSPGEKGEKGS 1086
Score = 106 (42.4 bits), Expect = 0.00020, P = 0.00020
Identities = 37/108 (34%), Positives = 49/108 (45%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKG- 57
+K KG GE+G KG V +KGE +G RG G D +GERG G
Sbjct: 248 VKEKGDFAPTGEKGQKGEPGFPGVPGYGEKGE----PGKQGPRGKPGKDGEKGERGSPGI 303
Query: 58 -SDEGERGMKG-----SEEGERGMKGSDEGERGTKG-SDEGERGTKGS 98
D G G+ G E+GE G+ G GT ++G+RG G+
Sbjct: 304 PGDSGYPGLPGRQGPQGEKGEAGLPGPPGTVIGTMPLGEKGDRGYPGA 351
>UNIPROTKB|G1K238 [details] [associations]
symbol:COL4A1 "Collagen alpha-1(IV) chain" species:9913
"Bos taurus" [GO:0071230 "cellular response to amino acid stimulus"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0005587 "collagen type IV" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 GO:GO:0007528 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
UniGene:Bt.32410 GO:GO:0005587 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 OMA:VAHGFLV EMBL:DAAA02034907
EMBL:DAAA02034908 EMBL:DAAA02034909 Ensembl:ENSBTAT00000035335
Uniprot:G1K238
Length = 1669
Score = 112 (44.5 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 39/106 (36%), Positives = 51/106 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--E 60
KG + GE+G KG + G + G +KGE G RG G D GE+G KGS
Sbjct: 251 KGDTAMRGEKGQKG-EPGFPGLPGFGEKGE----PGKPGPRGKPGKD-GEKGEKGSPGFP 304
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSD-----EGERGTKGSDDY 101
G+ G G + G+ G+KG ++GE G G G G KG Y
Sbjct: 305 GDSGYPG-QPGQDGLKG-EKGEAGPPGLPGTVIGTGPLGEKGEPGY 348
Score = 101 (40.6 bits), Expect = 0.00067, P = 0.00067
Identities = 37/105 (35%), Positives = 48/105 (45%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGS-------DKGEYVMKSSDEGERGMKG--SDEGERGM 55
G S G+ G KG D+G + G D G + D+GE+G G D+G RG
Sbjct: 912 GSSGPRGDPGFKG-DKGDVGLPGKPGSMDKVDMGSMKGEKGDQGEKGQTGPTGDKGSRGD 970
Query: 56 KGSD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G+ G+ G G G+ G KG D G G G+ G G KGS
Sbjct: 971 PGTPGVPGKDGQAG-HPGQPGPKG-DPGVSGIPGAP-GLPGPKGS 1012
>UNIPROTKB|E7END8 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01021044 ProteinModelPortal:E7END8 Ensembl:ENST00000547597
ArrayExpress:E7END8 Uniprot:E7END8
Length = 1676
Score = 112 (44.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 477 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 529
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 530 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 562
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 656 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 711
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 712 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 743
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 880 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 935
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 936 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 965
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00067
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 669 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 727
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 728 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 769
>UNIPROTKB|E7EUR3 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI01020718
Ensembl:ENST00000547846 Ensembl:ENST00000552971 Uniprot:E7EUR3
Length = 1676
Score = 112 (44.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 477 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 529
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 530 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 562
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 656 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 711
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 712 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 743
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 880 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 935
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 936 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 965
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00067
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 669 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 727
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 728 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 769
>UNIPROTKB|H0Y3M9 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:CR759733
HGNC:HGNC:2187 Ensembl:ENST00000395197 Ensembl:ENST00000547883
Uniprot:H0Y3M9
Length = 1676
Score = 112 (44.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 477 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 529
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 530 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 562
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 656 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 711
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 712 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 743
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 880 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 935
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 936 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 965
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00067
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 669 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 727
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 728 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 769
>UNIPROTKB|H0YHN2 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:BX248309
ProteinModelPortal:H0YHN2 Ensembl:ENST00000548637 Bgee:H0YHN2
Uniprot:H0YHN2
Length = 1683
Score = 112 (44.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 484 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 536
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 537 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 569
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 663 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 718
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 719 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 750
Score = 105 (42.0 bits), Expect = 0.00025, P = 0.00025
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 887 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 942
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 943 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 972
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 676 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 734
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 735 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 776
>UNIPROTKB|E7EV22 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01020710 Ensembl:ENST00000546402 ArrayExpress:E7EV22
Uniprot:E7EV22
Length = 1689
Score = 112 (44.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 490 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 542
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 543 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 575
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 669 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 724
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 725 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 756
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 893 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 948
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 949 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 978
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 682 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 740
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 741 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 782
>UNIPROTKB|H0YHM9 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:AL844527
EMBL:AL845446 EMBL:CR759733 EMBL:CR936877 HGNC:HGNC:2187
Ensembl:ENST00000374713 Ensembl:ENST00000550101
Ensembl:ENST00000550955 Ensembl:ENST00000551786 Uniprot:H0YHM9
Length = 1689
Score = 112 (44.5 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 490 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 542
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 543 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 575
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 669 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 724
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 725 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 756
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 893 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 948
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 949 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 978
Score = 101 (40.6 bits), Expect = 0.00068, P = 0.00068
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 682 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 740
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 741 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 782
>UNIPROTKB|E9PE40 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01021833 ProteinModelPortal:E9PE40 Ensembl:ENST00000546998
ArrayExpress:E9PE40 Uniprot:E9PE40
Length = 1710
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 511 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 563
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 564 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 596
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 690 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 745
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 746 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 777
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 914 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 969
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 970 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 999
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 703 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 761
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 762 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 803
>UNIPROTKB|H0Y3B5 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:AL844527
EMBL:AL845446 EMBL:CR759733 EMBL:CR936877 HGNC:HGNC:2187
Ensembl:ENST00000374714 Ensembl:ENST00000548739
Ensembl:ENST00000549088 Ensembl:ENST00000552556 Uniprot:H0Y3B5
Length = 1710
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 511 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 563
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 564 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 596
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 690 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 745
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 746 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 777
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 914 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 969
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 970 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 999
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 703 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 761
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 762 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 803
>UNIPROTKB|E7EP47 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI01022739
Ensembl:ENST00000552765 Ensembl:ENST00000553240 Uniprot:E7EP47
Length = 1715
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 516 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 568
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 569 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 601
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 695 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 750
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 751 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 782
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 919 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 974
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 975 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 1004
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 708 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 766
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 767 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 808
>UNIPROTKB|E7EQ71 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI01020835 Ensembl:ENST00000552796 ArrayExpress:E7EQ71
Uniprot:E7EQ71
Length = 1715
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 516 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 568
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 569 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 601
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 695 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 750
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 751 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 782
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 919 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 974
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 975 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 1004
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 708 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 766
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 767 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 808
>UNIPROTKB|H0YHM5 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL645940 EMBL:CR759733
HGNC:HGNC:2187 Ensembl:ENST00000357486 Ensembl:ENST00000551536
Uniprot:H0YHM5
Length = 1715
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 516 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 568
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 569 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 601
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 695 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 750
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 751 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 782
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 919 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 974
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 975 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 1004
Score = 101 (40.6 bits), Expect = 0.00069, P = 0.00069
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 708 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 766
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 767 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 808
>UNIPROTKB|E7ERR1 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 EMBL:AL844527 EMBL:AL845446
EMBL:CR936877 HGNC:HGNC:2187 IPI:IPI00939336
Ensembl:ENST00000549836 Ensembl:ENST00000549885 Uniprot:E7ERR1
Length = 1736
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 537 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 589
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 590 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 622
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 716 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 771
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 772 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 803
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 940 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 995
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 996 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 1025
Score = 101 (40.6 bits), Expect = 0.00070, P = 0.00070
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 729 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 787
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 788 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 829
>UNIPROTKB|E9PB88 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 HGNC:HGNC:2187 EMBL:CR354565
IPI:IPI00893615 ProteinModelPortal:E9PB88 Ensembl:ENST00000551413
ArrayExpress:E9PB88 Uniprot:E9PB88
Length = 1736
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 537 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 589
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 590 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 622
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 716 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 771
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 772 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 803
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 940 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 995
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 996 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 1025
Score = 101 (40.6 bits), Expect = 0.00070, P = 0.00070
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 729 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 787
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 788 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 829
>UNIPROTKB|P13942 [details] [associations]
symbol:COL11A2 "Collagen alpha-2(XI) chain" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0030020 "extracellular matrix structural constituent conferring
tensile strength" evidence=NAS] [GO:0001501 "skeletal system
development" evidence=IMP;NAS] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0060021 "palate development" evidence=IMP]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0060023
"soft palate development" evidence=IMP] [GO:0030199 "collagen
fibril organization" evidence=IDA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0005592 "collagen type XI"
evidence=NAS] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 Reactome:REACT_118779 EMBL:CH471081 GO:GO:0046872
GO:GO:0030199 GO:GO:0030674 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005788 GO:GO:0001894
GO:GO:0007605 Orphanet:90635 GO:GO:0051216 InterPro:IPR008160
Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791 SMART:SM00282
PROSITE:PS50025 GO:GO:0002062 GO:GO:0048705 EMBL:AL031228
Orphanet:90636 Pfam:PF02210 HOVERGEN:HBG004933 KO:K06236
Orphanet:1427 GO:GO:0030020 SMART:SM00210 Orphanet:2021
GO:GO:0005592 CTD:1302 EMBL:U32169 EMBL:AL645940 EMBL:AL662824
EMBL:AL844527 EMBL:AL845446 EMBL:CR759733 EMBL:CR936877
EMBL:BC053886 EMBL:U41069 EMBL:U41065 EMBL:U41066 EMBL:U41067
EMBL:L18987 EMBL:J04974 IPI:IPI00011283 IPI:IPI00219922
IPI:IPI00219923 IPI:IPI00219924 IPI:IPI00219925 IPI:IPI00219927
IPI:IPI00413940 IPI:IPI00748259 IPI:IPI00937105 PIR:S34790
RefSeq:NP_001157243.1 RefSeq:NP_542411.2 RefSeq:NP_542412.2
UniGene:Hs.390171 ProteinModelPortal:P13942 IntAct:P13942
MINT:MINT-5222373 STRING:P13942 PhosphoSite:P13942 DMDM:116241308
PaxDb:P13942 PRIDE:P13942 Ensembl:ENST00000341947
Ensembl:ENST00000383087 Ensembl:ENST00000383088
Ensembl:ENST00000395194 Ensembl:ENST00000439039
Ensembl:ENST00000447741 Ensembl:ENST00000452937
Ensembl:ENST00000547261 Ensembl:ENST00000547999
Ensembl:ENST00000549289 Ensembl:ENST00000549381
Ensembl:ENST00000549811 Ensembl:ENST00000550561
Ensembl:ENST00000551542 Ensembl:ENST00000551758 GeneID:1302
KEGG:hsa:1302 UCSC:uc003ocx.1 UCSC:uc003ocy.1 UCSC:uc003ocz.1
GeneCards:GC06M033130 H-InvDB:HIX0033301 H-InvDB:HIX0166403
H-InvDB:HIX0166658 H-InvDB:HIX0166919 H-InvDB:HIX0167181
H-InvDB:HIX0167416 H-InvDB:HIX0184201 H-InvDB:HIX0207630
HGNC:HGNC:2187 MIM:120290 MIM:184840 MIM:215150 MIM:277610
MIM:601868 MIM:609706 MIM:614524 neXtProt:NX_P13942 Orphanet:166100
Orphanet:3450 PharmGKB:PA26703 HOGENOM:HOG000205337
InParanoid:P13942 GenomeRNAi:1302 NextBio:5291 ArrayExpress:P13942
Bgee:P13942 CleanEx:HS_COL11A2 Genevestigator:P13942
GermOnline:ENSG00000204248 GO:GO:0060023 Uniprot:P13942
Length = 1736
Score = 112 (44.5 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 38/96 (39%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G D G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 537 RGRAGADGARGMPG-DPG---VKG-DRGFDGLPGLP-GEKGHRG-DTGAQGLPGPPGEDG 589
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 590 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 622
Score = 107 (42.7 bits), Expect = 0.00016, P = 0.00016
Identities = 37/95 (38%), Positives = 50/95 (52%)
Query: 9 HEGERGMKGSDEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG D G +KG +KGE +G+ G+KG D GE G+ GS GE G +
Sbjct: 716 YPGPRGVKGVD-GIRGLKGHKGEKGEDGFPGF-KGDIGVKG-DRGEVGVPGS-RGEDGPE 771
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G G D G G G ++G+ G G Y
Sbjct: 772 GPK-GRTGPTG-DPGPPGLMG-EKGKLGVPGLPGY 803
Score = 105 (42.0 bits), Expect = 0.00026, P = 0.00026
Identities = 36/92 (39%), Positives = 47/92 (51%)
Query: 11 GERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
GERG G G+ + G+ G+ K D G G G D G G++G GERG+ G+
Sbjct: 940 GERGHPGPPGPPGEQGLPGT-AGKEGTKG-DPGPPGAPGKD-GPAGLRGFP-GERGLPGT 995
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G G+KG++ G G GS GERG GS
Sbjct: 996 AGGP-GLKGNEGPSGPPGPAGSP-GERGAAGS 1025
Score = 101 (40.6 bits), Expect = 0.00070, P = 0.00070
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 729 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPPG 787
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 788 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 829
>CGD|CAL0006398 [details] [associations]
symbol:HYR1 species:5476 "Candida albicans" [GO:0009277
"fungal-type cell wall" evidence=ISS;IDA] [GO:0046658 "anchored to
plasma membrane" evidence=ISS] [GO:0009986 "cell surface"
evidence=ISS;IDA] [GO:0005576 "extracellular region" evidence=IDA]
[GO:0030446 "hyphal cell wall" evidence=IDA] [GO:0030985 "high
molecular weight kininogen binding" evidence=IDA] [GO:0044407
"single-species biofilm formation in or on host organism"
evidence=IMP] [GO:0044413 "avoidance of host defenses"
evidence=IMP] CGD:CAL0006398 GO:GO:0005576 GO:GO:0009986
EMBL:AACQ01000010 GO:GO:0030446 GO:GO:0046658 GO:GO:0044407
GO:GO:0030985 GO:GO:0044413 InterPro:IPR021031 Pfam:PF11765
RefSeq:XP_722183.1 STRING:Q5AL03 GeneID:3636226 KEGG:cal:CaO19.4975
Uniprot:Q5AL03
Length = 919
Score = 109 (43.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 31/96 (32%), Positives = 38/96 (39%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G +EG + + G GS+ G SD G GS GS+ G
Sbjct: 592 GSGAGSNEGSQSGPNNGSGSGCEGGSNNGSG--SGSDSGSNNGSGSGSNNGSGSGSNNGS 649
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GS EG G GS+EG GS+EG GS
Sbjct: 650 GSGSGSTEGSEGGSGSNEGSN--HGSNEGSGSGSGS 683
Score = 99 (39.9 bits), Expect = 0.00056, P = 0.00056
Identities = 31/97 (31%), Positives = 37/97 (38%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G G GS GS+ G S EG G GS+EG GS+EG
Sbjct: 620 GSGSGSDSGSNNGSGSGSNNGSGSGSNNGSGSGSGSTEGSEGGSGSNEGSN--HGSNEGS 677
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GS+ G G GS+ G S G GS+
Sbjct: 678 GSGSGSQTGS-G-SGSNNGSGSGSQSGSGSGSQSGSE 712
Score = 98 (39.6 bits), Expect = 0.00072, P = 0.00072
Identities = 32/96 (33%), Positives = 39/96 (40%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G EG G GS+EG GS++G S G G GS+ G S G
Sbjct: 650 GSGSGSTEGSEGGSGSNEGSN--HGSNEGSGSGSGSQTGS-G-SGSNNGSGSGSQSGSGS 705
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GSE G GS+EG G+ E +GS
Sbjct: 706 GSQSGSESGSNS--GSNEGSNPGAGNGSNEGSGQGS 739
Score = 98 (39.6 bits), Expect = 0.00072, P = 0.00072
Identities = 34/100 (34%), Positives = 38/100 (38%)
Query: 3 GKGRSVHEGER-GM-KGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G G G G GSD G GS S+ G GS EG G GS+E
Sbjct: 608 GSGSGCEGGSNNGSGSGSDSGSNNGSGSGSNNGSGSGSNNGSGSGSGSTEGSEGGSGSNE 667
Query: 61 GERGMKGSEEGERGMKGSDEGE-RGTK-GSDEGERGTKGS 98
G GS EG GS G G+ GS G + GS
Sbjct: 668 GSN--HGSNEGSGSGSGSQTGSGSGSNNGSGSGSQSGSGS 705
>UNIPROTKB|Q5AL03 [details] [associations]
symbol:HYR1 "Hyphally regulated cell wall protein"
species:237561 "Candida albicans SC5314" [GO:0005576 "extracellular
region" evidence=IDA] [GO:0009277 "fungal-type cell wall"
evidence=ISS;IDA] [GO:0009986 "cell surface" evidence=ISS;IDA]
[GO:0030446 "hyphal cell wall" evidence=IDA] [GO:0030985 "high
molecular weight kininogen binding" evidence=IDA] [GO:0044407
"single-species biofilm formation in or on host organism"
evidence=IMP] [GO:0044413 "avoidance of host defenses"
evidence=IMP] [GO:0046658 "anchored to plasma membrane"
evidence=ISS] CGD:CAL0006398 GO:GO:0005576 GO:GO:0009986
EMBL:AACQ01000010 GO:GO:0030446 GO:GO:0046658 GO:GO:0044407
GO:GO:0030985 GO:GO:0044413 InterPro:IPR021031 Pfam:PF11765
RefSeq:XP_722183.1 STRING:Q5AL03 GeneID:3636226 KEGG:cal:CaO19.4975
Uniprot:Q5AL03
Length = 919
Score = 109 (43.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 31/96 (32%), Positives = 38/96 (39%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G +EG + + G GS+ G SD G GS GS+ G
Sbjct: 592 GSGAGSNEGSQSGPNNGSGSGCEGGSNNGSG--SGSDSGSNNGSGSGSNNGSGSGSNNGS 649
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GS EG G GS+EG GS+EG GS
Sbjct: 650 GSGSGSTEGSEGGSGSNEGSN--HGSNEGSGSGSGS 683
Score = 99 (39.9 bits), Expect = 0.00056, P = 0.00056
Identities = 31/97 (31%), Positives = 37/97 (38%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G G GS GS+ G S EG G GS+EG GS+EG
Sbjct: 620 GSGSGSDSGSNNGSGSGSNNGSGSGSNNGSGSGSGSTEGSEGGSGSNEGSN--HGSNEGS 677
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
GS+ G G GS+ G S G GS+
Sbjct: 678 GSGSGSQTGS-G-SGSNNGSGSGSQSGSGSGSQSGSE 712
Score = 98 (39.6 bits), Expect = 0.00072, P = 0.00072
Identities = 32/96 (33%), Positives = 39/96 (40%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G EG G GS+EG GS++G S G G GS+ G S G
Sbjct: 650 GSGSGSTEGSEGGSGSNEGSN--HGSNEGSGSGSGSQTGS-G-SGSNNGSGSGSQSGSGS 705
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GSE G GS+EG G+ E +GS
Sbjct: 706 GSQSGSESGSNS--GSNEGSNPGAGNGSNEGSGQGS 739
Score = 98 (39.6 bits), Expect = 0.00072, P = 0.00072
Identities = 34/100 (34%), Positives = 38/100 (38%)
Query: 3 GKGRSVHEGER-GM-KGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
G G G G GSD G GS S+ G GS EG G GS+E
Sbjct: 608 GSGSGCEGGSNNGSGSGSDSGSNNGSGSGSNNGSGSGSNNGSGSGSGSTEGSEGGSGSNE 667
Query: 61 GERGMKGSEEGERGMKGSDEGE-RGTK-GSDEGERGTKGS 98
G GS EG GS G G+ GS G + GS
Sbjct: 668 GSN--HGSNEGSGSGSGSQTGSGSGSNNGSGSGSQSGSGS 705
>UNIPROTKB|F1MND9 [details] [associations]
symbol:COL9A1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005594 "collagen type IX" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001894
"tissue homeostasis" evidence=IEA] Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001894
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210
SMART:SM00210 OMA:GFCEPAS GO:GO:0005594 GO:GO:0003417
GeneTree:ENSGT00700000104194 EMBL:DAAA02025161 EMBL:DAAA02025162
EMBL:DAAA02025163 EMBL:DAAA02025164 EMBL:DAAA02025165
IPI:IPI00968741 IntAct:F1MND9 Ensembl:ENSBTAT00000061549
Uniprot:F1MND9
Length = 926
Score = 109 (43.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 6 RSVHEGERGMKGS--DEGKYVMKGSDKGEYVMK-SSDEGERGMKGSD--EGERGMKGS-- 58
RS H+GE G +G + G G+ + + ++GE+G +G D G +G+ G+
Sbjct: 447 RSKHQGEEGDQGGLGEVGAQGPPGAQGLRGITGVAGEKGEKGARGLDGEPGPQGLPGAPG 506
Query: 59 DEGERGMKGS--EEGERGMKGSD--EGERGTKGSDEGERGTKGSD 99
D+G+RG G +G+RG +GS G G KG D G G G D
Sbjct: 507 DQGQRGPPGEIGPKGDRGPQGSPGIPGLPGPKG-DTGLPGVDGRD 550
Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG+ G S EGE G +G + G + G KG + + GE G++G EG RG+ G +E
Sbjct: 679 KGEQGASGEEGEAGERG-ELGDIGLPGP-KGS----AGNPGEPGVRGP-EGSRGLPG-EE 730
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G RG G RG++G ++G G G +G G +D ++
Sbjct: 731 GPRG----PPGPRGVQG-EQGATGLPGI-QGPPGRAPTDQHI 766
>UNIPROTKB|F1NWY2 [details] [associations]
symbol:F1NWY2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001763 "morphogenesis of a branching
structure" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IEA]
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008201
"heparin binding" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=IEA] GO:GO:0008201 GO:GO:0005911 GO:GO:0016337
GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063274 OMA:YPHREYP EMBL:AADN02027997
IPI:IPI00587282 Ensembl:ENSGALT00000006816 Uniprot:F1NWY2
Length = 632
Score = 107 (42.7 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 36/104 (34%), Positives = 50/104 (48%)
Query: 1 MKGK-GRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG 57
MKG+ G +GE+G G G KG+ + V + G G+ G G +G G
Sbjct: 230 MKGEPGTPGEKGEKGRAGDPGLPGPKGEKGNGENALVGGKGEPGPPGLPGPP-GPKGEAG 288
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
D G G +G E+GERG G ++G G +G +GE G DY
Sbjct: 289 -DVGAAGSRG-EKGERGAPG-EQGPMGPRGP-KGEPGKDEMMDY 328
Score = 106 (42.4 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 39/104 (37%), Positives = 49/104 (47%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYV-MKSSD--EGERGMKG--SDEGERGMKGS 58
+G +GERGM G G++ MKG+ MK GE+G KG D G G KG
Sbjct: 199 QGYPGRKGERGMPGLP-GRHGMKGAPGTATAGMKGEPGTPGEKGEKGRAGDPGLPGPKGE 257
Query: 59 D-EGERGMKGS--EEGERGMKG--SDEGERGTKGSDEGERGTKG 97
GE + G E G G+ G +GE G G+ G RG KG
Sbjct: 258 KGNGENALVGGKGEPGPPGLPGPPGPKGEAGDVGA-AGSRGEKG 300
Score = 102 (41.0 bits), Expect = 0.00017, P = 0.00017
Identities = 38/107 (35%), Positives = 52/107 (48%)
Query: 9 HEGERGMKGSD-----EGKYVMKGSDKGEYVMKSSDEGERGMKGS--DEGERGMKGSD-- 59
H+GE+G +G G + + G D G +K + G+ G+ G D+GE G GS
Sbjct: 374 HDGEKGPRGKPGEMGPPGPHGLPGRD-GPPGIKG-EPGQIGVAGEKGDKGEPGQAGSPGL 431
Query: 60 EGERGMKGSEEGERGMKGSD--------EGERGTKGSDEGERGTKGS 98
+G G KG E G++GM G G G KG GERG KG+
Sbjct: 432 DGPTGEKG-ERGDQGMPGPPGLPGPIGLPGLTGEKGQP-GERGDKGN 476
>UNIPROTKB|J3KPW3 [details] [associations]
symbol:C1QTNF7 "Complement C1q tumor necrosis
factor-related protein 7" species:9606 "Homo sapiens" [GO:0005615
"extracellular space" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] InterPro:IPR008160 Pfam:PF01391
HGNC:HGNC:14342 EMBL:AC007016 EMBL:AC099550 Ensembl:ENST00000397700
Uniprot:J3KPW3
Length = 151
Score = 96 (38.9 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 33/85 (38%), Positives = 43/85 (50%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEGE 62
GR +G +G KG ++G ++G K+ G G KG D+GE G KG EGE
Sbjct: 69 GRDGRDGRKGEKG-EKGTAGLRG--------KTGPLGLAGEKG-DQGETGKKGPIGPEGE 118
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG 87
+G G G G KG D GE+G G
Sbjct: 119 KGEVGPI-GPPGPKG-DRGEQGDPG 141
Score = 87 (35.7 bits), Expect = 0.00045, P = 0.00045
Identities = 26/63 (41%), Positives = 33/63 (52%)
Query: 41 GERGMKGSD--EGERGMKGSD--EGERGMKGSEEGERGMKGSDE--GERGTKGSDEGERG 94
G G GS G G+ G D +G +G KG E+G G++G G G KG D+GE G
Sbjct: 51 GPPGANGSPGPHGRIGLPGRDGRDGRKGEKG-EKGTAGLRGKTGPLGLAGEKG-DQGETG 108
Query: 95 TKG 97
KG
Sbjct: 109 KKG 111
>UNIPROTKB|F1P0Y1 [details] [associations]
symbol:COL17A1 "Collagen alpha-1(XVII) chain" species:9031
"Gallus gallus" [GO:0030056 "hemidesmosome" evidence=IEA]
[GO:0031581 "hemidesmosome assembly" evidence=IEA]
InterPro:IPR008160 Pfam:PF01391 GO:GO:0030056 GO:GO:0031581
GeneTree:ENSGT00700000104250 OMA:LDYAELS IPI:IPI00581402
EMBL:AADN02030846 Ensembl:ENSGALT00000013548 ArrayExpress:F1P0Y1
Uniprot:F1P0Y1
Length = 1495
Score = 111 (44.1 bits), Expect = 5.1e-05, P = 5.1e-05
Identities = 38/97 (39%), Positives = 50/97 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G GE GMKG D G KG D+G + G G +G EG +G KGS G+
Sbjct: 555 RGEQRERGEPGMKG-DMGLQGPKG-DRGLPGVPGIP-GPVGHQGP-EGPKGQKGS-MGDP 609
Query: 64 GMKGSEEGERGMKG--SDEGERGTKG-SDEGERGTKG 97
GM+G G+RG +G GE G G ++G+RG G
Sbjct: 610 GMEGPM-GQRGREGLPGPRGEPGPPGFGEKGDRGAAG 645
Score = 103 (41.3 bits), Expect = 0.00036, P = 0.00036
Identities = 37/100 (37%), Positives = 49/100 (49%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMK--SSDEGERGMKGSDEGERGMKGSDEG 61
+G + G +G KG+ G KG D+GE + + ++G RG+ G GE G KG G
Sbjct: 680 RGEAGLPGAKGEKGAT-GPPGPKG-DQGEKGARGMTGEQGSRGIPGPP-GEPGAKGP-AG 735
Query: 62 ERGMKGS--EEGERGMKGSDEGERGTKG--SDEGERGTKG 97
+ G G E GE G+ G G RG G D GE G G
Sbjct: 736 QAGRDGQPGERGEPGLMGMP-GARGPPGPSGDTGEPGLTG 774
>ZFIN|ZDB-GENE-070501-8 [details] [associations]
symbol:col6a3 "collagen, type VI, alpha 3"
species:7955 "Danio rerio" [GO:0004867 "serine-type endopeptidase
inhibitor activity" evidence=IEA] InterPro:IPR002035
InterPro:IPR002223 InterPro:IPR003961 Pfam:PF00014 Pfam:PF00092
PRINTS:PR00759 PROSITE:PS50234 PROSITE:PS50279 PROSITE:PS50853
SMART:SM00131 SMART:SM00327 ZFIN:ZDB-GENE-070501-8 GO:GO:0004867
Gene3D:4.10.410.10 InterPro:IPR020901 SUPFAM:SSF57362
PROSITE:PS00280 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00530000063022 EMBL:CR545476 IPI:IPI01023461
Ensembl:ENSDART00000138754 ArrayExpress:F1QKE8 Uniprot:F1QKE8
Length = 3733
Score = 115 (45.5 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 35/89 (39%), Positives = 48/89 (53%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMK--SSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG+KGS G KG + GE + + +EG G+ G G+RG G G +G KG
Sbjct: 2638 GQRGVKGS-RGYNGEKG-EIGEIGLDGINGEEGTSGIAGPP-GDRGNPGQ-RGPKGAKG- 2692
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G+ G G G+ GT G D +RG KG
Sbjct: 2693 QAGDAGQIGI-RGDPGTPGRDNTQRGPKG 2720
Score = 111 (44.1 bits), Expect = 0.00014, P = 0.00014
Identities = 36/97 (37%), Positives = 49/97 (50%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G+G S H G+ G G + G + G+ + G+RG+KGS G G KG + GE
Sbjct: 2606 GQGSSGHPGDEGGPG-ERGPPGVNGTQGFQ-----GCPGQRGVKGS-RGYNGEKG-EIGE 2657
Query: 63 RGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G+ G EEG G+ G G+RG G G +G KG
Sbjct: 2658 IGLDGINGEEGTSGIAGPP-GDRGNPGQ-RGPKGAKG 2692
Score = 103 (41.3 bits), Expect = 0.00097, P = 0.00097
Identities = 33/87 (37%), Positives = 42/87 (48%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G+RG G K G + GERG G + G +G +G G+RG+KGS
Sbjct: 2590 GDRGAVGVPGQKGQSGGQGSSGHPGDEGGPGERGPPGVN-GTQGFQGCP-GQRGVKGSR- 2646
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKG 97
G G KG + GE G G + GE GT G
Sbjct: 2647 GYNGEKG-EIGEIGLDGIN-GEEGTSG 2671
>DICTYBASE|DDB_G0268004 [details] [associations]
symbol:snrp70 "U1 small nuclear ribonucleoprotein 70
kDa protein" species:44689 "Dictyostelium discoideum" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0043484 "regulation of RNA splicing"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=ISS] [GO:0005685
"U1 snRNP" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 dictyBase:DDB_G0268004 GenomeReviews:CM000150_GR
GO:GO:0000166 Gene3D:3.30.70.330 EMBL:AAFI02000003 GO:GO:0005681
GO:GO:0003723 GO:GO:0043484 GO:GO:0000398 eggNOG:COG0724
HSSP:Q14103 GO:GO:0005685 KO:K11093 InterPro:IPR022023 Pfam:PF12220
RefSeq:XP_647483.1 ProteinModelPortal:Q55FQ0 STRING:Q55FQ0
EnsemblProtists:DDB0233134 GeneID:8616290 KEGG:ddi:DDB_G0268004
OMA:YLMEPAP Uniprot:Q55FQ0
Length = 459
Score = 105 (42.0 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 37/102 (36%), Positives = 53/102 (51%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G S G+RG +G + +G D+G+ +S + ERG +G D RG G E E
Sbjct: 256 GSGGS--GGDRGDRGDRD-----RG-DRGDRSDRSDRDRERG-RG-DRDHRGSGGERERE 305
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG-SDEGERGTK---GSDD 100
R + + G G +G D G+R +G SD G+RG + G DD
Sbjct: 306 RDQR--DRG--GDRGGDRGDRSDRGRSDRGDRGDRSDRGRDD 343
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 35/111 (31%), Positives = 54/111 (48%)
Query: 2 KGKGRSVHEG---ERGMKGSDEGKYVMKGSDKGEYVMKS-SDEGERGMK---GSDEGERG 54
+G+G H G ER + + +G D+G+ + SD G+RG + G D+ ERG
Sbjct: 288 RGRGDRDHRGSGGERERERDQRDRGGDRGGDRGDRSDRGRSDRGDRGDRSDRGRDDRERG 347
Query: 55 MKGSDEGERGM---KGSEEGERGMKGS--DEGERGTKGSDEGERGTKGSDD 100
D G+RG +G + +R +GS D G+R + SD G +G D
Sbjct: 348 R--DDRGDRGRDDRRGGSDRDRD-RGSRDDRGDRDDR-SDRGRDDRRGGSD 394
>UNIPROTKB|D3ZZM1 [details] [associations]
symbol:Taf15 "Protein Taf15" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR001876
InterPro:IPR012677 Pfam:PF00076 Pfam:PF00641 PROSITE:PS01358
PROSITE:PS50102 PROSITE:PS50199 SMART:SM00360 SMART:SM00547
RGD:1309595 GO:GO:0000166 GO:GO:0008270 Gene3D:3.30.70.330
GO:GO:0003676 GO:GO:0005622 EMBL:AC119615 IPI:IPI00950003
ProteinModelPortal:D3ZZM1 Ensembl:ENSRNOT00000064396
ArrayExpress:D3ZZM1 Uniprot:D3ZZM1
Length = 558
Score = 106 (42.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 38/96 (39%), Positives = 44/96 (45%)
Query: 11 GERGMKGSDEG-KYVMKGSDKGEYVM-KSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
G+RG G D G Y G D+G Y + G+RG G D RG G D G G G
Sbjct: 462 GDRGGYGGDRGGSY---GGDRGGYGGDRGGYGGDRGGYGGDRS-RGAYGGDRG--GGSGG 515
Query: 69 EEGER-GMKGSDEGERGTKGSDEGERGTK--GSDDY 101
G+R G G D G G G D G G K G +DY
Sbjct: 516 YGGDRSGGYGGDRG--GGYGGDRGGYGGKMGGRNDY 549
Score = 99 (39.9 bits), Expect = 0.00030, P = 0.00030
Identities = 37/103 (35%), Positives = 47/103 (45%)
Query: 4 KGRSVHEGERGMKGSDE--GKYVMKGSDK--GEYVMKSSDEGERGMK--GSDEGERGMKG 57
+GR G+RG G+D G Y G D+ G Y S G G + G G+RG G
Sbjct: 404 RGRGGRGGDRGGYGADRSGGGY---GGDRSGGSYGADRSGGGYGGDRSGGGYGGDRG--G 458
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERG-TKGSDEGERGTKGSD 99
G+RG G + G G G D G G +G G+RG G D
Sbjct: 459 GYGGDRGGYGGDRG--GSYGGDRGGYGGDRGGYGGDRGGYGGD 499
Score = 95 (38.5 bits), Expect = 0.00081, P = 0.00081
Identities = 34/96 (35%), Positives = 43/96 (44%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+G S + G+RG G D G Y G D+G Y + RG G D G G G G+R
Sbjct: 471 RGGS-YGGDRGGYGGDRGGY---GGDRGGY----GGDRSRGAYGGDRG--GGSGGYGGDR 520
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G G+RG G G+RG G G R +D
Sbjct: 521 S--GGYGGDRG--GGYGGDRGGYGGKMGGRNDYRND 552
>UNIPROTKB|I3LK67 [details] [associations]
symbol:I3LK67 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005604 "basement membrane" evidence=IEA]
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00700000104250
EMBL:CU914429 Ensembl:ENSSSCT00000028903 OMA:IHEHTRK Uniprot:I3LK67
Length = 232
Score = 100 (40.3 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 36/104 (34%), Positives = 49/104 (47%)
Query: 1 MKG-KGRSVHEGERGMKGSD--EGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGM 55
+KG KG G+RG G D G+ + G D+G Y +GE+G KG D G G
Sbjct: 67 VKGEKGEQGEPGKRGKPGKDGESGQPGIPGLPGDRG-YPGAPGRDGEKGQKG-DTGPTGP 124
Query: 56 KGSDEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G G+ E+G G+ G ++GERG G +G G G
Sbjct: 125 PGLVIPRPGVTIGEKGNIGLPGLPGEKGERGFPGI-QGPPGLPG 167
>ZFIN|ZDB-GENE-030131-9786 [details] [associations]
symbol:col9a2 "procollagen, type IX, alpha 2"
species:7955 "Danio rerio" [GO:0005581 "collagen" evidence=IEA]
ZFIN:ZDB-GENE-030131-9786 InterPro:IPR008160 Pfam:PF01391
HOVERGEN:HBG004933 EMBL:BC078424 IPI:IPI00505918 UniGene:Dr.75252
ProteinModelPortal:Q66L59 InParanoid:Q66L59 ArrayExpress:Q66L59
Uniprot:Q66L59
Length = 691
Score = 107 (42.7 bits), Expect = 5.5e-05, P = 5.5e-05
Identities = 41/97 (42%), Positives = 52/97 (53%)
Query: 10 EGERGMKGSD--EGKYVMKGSD--KGEYVM--KSSDEGERGMKGSDEGERGMKGSDEGER 63
+GE G+KG G M+GS +GE ++ EG G KG D GERG G G
Sbjct: 345 KGEVGVKGETGPRGLMGMQGSPGPQGEPGPPGEAGMEGVPGAKG-DRGERGPVGP-AGVI 402
Query: 64 GMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKGS 98
G+ GS+ GERG G +G GTKG D+G +G GS
Sbjct: 403 GLPGSK-GERGPMGVPGAQGLTGTKG-DKGFQGKVGS 437
Score = 96 (38.9 bits), Expect = 0.00083, P = 0.00083
Identities = 40/107 (37%), Positives = 48/107 (44%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKS--SDEGERGMKG--SDEGERGMKG 57
KG H G G GS GK +KG GE + +G RG G +GE G +G
Sbjct: 192 KGHKGHSGVLGDPGSI-GKTGIKGEVGISGEQGIPGPPGPQGLRGYPGMVGPKGETGPQG 250
Query: 58 SDE--GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDYV 102
G G+ G GE G +G GE G KG D GERG +G V
Sbjct: 251 YKGILGPIGIPG-RPGEEGPQGPP-GEPGDKG-DMGERGIRGPQGVV 294
>ZFIN|ZDB-GENE-041105-6 [details] [associations]
symbol:col5a1 "procollagen, type V, alpha 1"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 ZFIN:ZDB-GENE-041105-6
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 SMART:SM00282 Pfam:PF02210 GO:GO:0005201
SMART:SM00210 GeneTree:ENSGT00700000104155 EMBL:CU459135
EMBL:FP102894 EMBL:FP102966 EMBL:FP236595 IPI:IPI00963036
Ensembl:ENSDART00000027425 ArrayExpress:F1QPN2 Bgee:F1QPN2
Uniprot:F1QPN2
Length = 2024
Score = 112 (44.5 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 9 HEGERGMKGSDEGKYVMKGS--DKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMK 66
+ G RG+KG+D G +KG+ +KGE +G+ G+KG D+GE G G GE G +
Sbjct: 972 YPGPRGVKGAD-GVRGLKGNKGEKGEDGFPGF-KGDMGVKG-DKGELGAAGP-RGEDGPE 1027
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G + G G+ G D G G G ++G+ G G Y
Sbjct: 1028 GPK-GRSGLPG-DPGPLGPLG-EKGKLGVPGLPGY 1059
Score = 108 (43.1 bits), Expect = 0.00015, P = 0.00015
Identities = 38/104 (36%), Positives = 55/104 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVM---KSSD--EGERGMKG--SDEGERGMK 56
KG +GE G G +G +KG DKGE + D EG +G G D G G
Sbjct: 988 KGNKGEKGEDGFPGF-KGDMGVKG-DKGELGAAGPRGEDGPEGPKGRSGLPGDPGPLGPL 1045
Query: 57 GSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G ++G+ G+ G G +G KGS +G +G +G+ GE+GT+G+
Sbjct: 1046 G-EKGKLGVPGLPGYPGRQGPKGS-QGFQGFQGTS-GEKGTRGT 1086
Score = 101 (40.6 bits), Expect = 0.00083, P = 0.00083
Identities = 36/94 (38%), Positives = 47/94 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
+GR +G RGM G G +G D G + ++G RG G +G G G D GER
Sbjct: 793 RGRPGSDGARGMPGQT-GPKGDRGFD-GLAGLPG-EKGHRGETGP-QGPPGPSGED-GER 847
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G E G RG+ G + G RG G +G +G G
Sbjct: 848 GDDG-EVGPRGLPG-EPGPRGVLGP-KGPQGPPG 878
>UNIPROTKB|F1P2R3 [details] [associations]
symbol:COL4A1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005587 "collagen type IV"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0048407 "platelet-derived growth factor binding"
evidence=IEA] [GO:0071230 "cellular response to amino acid
stimulus" evidence=IEA] InterPro:IPR001442 Pfam:PF01413
PROSITE:PS51403 SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436
InterPro:IPR008160 Pfam:PF01391 GO:GO:0071230 GO:GO:0005201
GO:GO:0005587 Gene3D:2.170.240.10 GeneTree:ENSGT00690000101772
OMA:VAHGFLV EMBL:AADN02017974 EMBL:AADN02017975 IPI:IPI00602927
Ensembl:ENSGALT00000027197 Uniprot:F1P2R3
Length = 1669
Score = 111 (44.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 39/102 (38%), Positives = 55/102 (53%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSDEGERGMKG 57
M G KG +G+ G+ GS G + G +G +K S +GE G+ G+ G G G
Sbjct: 838 MPGPKGDKGSQGQPGVPGS-VGLPGLPGP-QGSVGLKGSAGAKGEMGVMGTP-GLPGTPG 894
Query: 58 SDEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G+RG+ G E+G +G+KG +GE G KG D+GE G G
Sbjct: 895 P-VGDRGLPG-EKGSQGLKGVVGPQGEPGVKG-DKGEAGLPG 933
Score = 110 (43.8 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 37/105 (35%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKG----SDKGEYVMKSSDEGERGMKGS--DEGERGMKG 57
KG +GE G+KG D+G+ + G D + V +G+ G KG GE+G++G
Sbjct: 911 KGVVGPQGEPGVKG-DKGEAGLPGIPGSMDTMDMVSLKGQKGDPGEKGDLGPTGEKGLRG 969
Query: 58 SDEGERGMKGSEEGERGMKGSD--EGERGTKG--SDEGERGTKGS 98
+ GE G+ G +GE G G +G++G G D G G KGS
Sbjct: 970 -EYGEPGIPG-RDGEPGTPGQPGPKGDQGPPGYPGDPGIPGQKGS 1012
Score = 108 (43.1 bits), Expect = 0.00012, P = 0.00012
Identities = 36/99 (36%), Positives = 50/99 (50%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
MK KG + +GE+G G ++G+ + G Y GE+G G G RG G D
Sbjct: 239 MKEKGSEIIKGEKGEPG-EKGEQGVPGLPGSGY------RGEKGEPGKP-GPRGKPGKD- 289
Query: 61 GERGMKGSE--EGERGMKGSDEGERGTKGSDEGERGTKG 97
GE G KG G G+ G GE G KG ++G++G +G
Sbjct: 290 GEPGPKGEPGLPGGFGIPGRP-GEPGAKG-EKGDQGPQG 326
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 33/85 (38%), Positives = 45/85 (52%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD-EGE 62
KG +G +G G MK +KG ++K ++GE G KG ++G G+ GS GE
Sbjct: 218 KGEKGEQGVQGPPGPPGPAPHMK--EKGSEIIKG-EKGEPGEKG-EQGVPGLPGSGYRGE 273
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG 87
+G G + G RG G D GE G KG
Sbjct: 274 KGEPG-KPGPRGKPGKD-GEPGPKG 296
>UNIPROTKB|F1Q0F7 [details] [associations]
symbol:COL4A5 "Collagen alpha-5(IV) chain" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR001442 Pfam:PF01413 PROSITE:PS51403
SMART:SM00111 InterPro:IPR016187 SUPFAM:SSF56436 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005201 Gene3D:2.170.240.10
GeneTree:ENSGT00690000101772 EMBL:AAEX03026757 EMBL:AAEX03026761
EMBL:AAEX03026758 EMBL:AAEX03026759 EMBL:AAEX03026760
Ensembl:ENSCAFT00000018078 Uniprot:F1Q0F7
Length = 1678
Score = 111 (44.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 37/104 (35%), Positives = 50/104 (48%)
Query: 1 MKG-KGRSVHEGERGMKGSD--EGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGM 55
MKG KG G+RG G D G+ + G D G Y + +GE+G KG D G G
Sbjct: 284 MKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPG-YPGEPGRDGEKGQKG-DIGSTGP 341
Query: 56 KGSDEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G + G+ E+G G+ G ++GERG G +G G G
Sbjct: 342 PGLSKPGTGVTVGEKGNMGLPGLPGEKGERGFPGI-QGPPGLPG 384
>CGD|CAL0004905 [details] [associations]
symbol:IFF6 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0009986 "cell surface"
evidence=ISS;IDA] [GO:0009277 "fungal-type cell wall" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005937 "mating
projection" evidence=IEA] [GO:0000753 "cell morphogenesis involved
in conjugation with cellular fusion" evidence=IEA] CGD:CAL0004905
GO:GO:0009986 GO:GO:0009277 EMBL:AACQ01000107 InterPro:IPR021031
Pfam:PF11765 RefSeq:XP_714246.1 GeneID:3644087 KEGG:cal:CaO19.4072
Uniprot:Q59XL0
Length = 1086
Score = 109 (43.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/100 (34%), Positives = 37/100 (37%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G + G GS G GS+ G SD G GSD G GSD G
Sbjct: 856 GSGSNNGSGNESGSGSGSGNGSGDGSNNGSG--NGSDNGTGSGNGSDNGTGSGSGSDNGS 913
Query: 63 RGMKGSEEGE-RGM-KGSDEGERGTKGSDEGERGTKGSDD 100
GS G G GSD G GS G GSD+
Sbjct: 914 GSGSGSGSGSGNGSGSGSDNGSGSGNGSGSGSGSGSGSDN 953
Score = 99 (39.9 bits), Expect = 0.00068, P = 0.00068
Identities = 35/98 (35%), Positives = 39/98 (39%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGE-RGM-KGSDE 60
G G + G G GSD G GSD G SD G GS G G GSD
Sbjct: 876 GSGDGSNNGS-G-NGSDNGTGSGNGSDNGTGSGSGSDNGSGSGSGSGSGSGNGSGSGSDN 933
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G GS G GSD G G+ GS+ G G+
Sbjct: 934 GSGSGNGSGSGSGSGSGSDNGS-GS-GSNNGSGNGSGN 969
>UNIPROTKB|Q59XL0 [details] [associations]
symbol:IFF6 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0009277 "fungal-type cell
wall" evidence=IDA] [GO:0009986 "cell surface" evidence=ISS;IDA]
CGD:CAL0004905 GO:GO:0009986 GO:GO:0009277 EMBL:AACQ01000107
InterPro:IPR021031 Pfam:PF11765 RefSeq:XP_714246.1 GeneID:3644087
KEGG:cal:CaO19.4072 Uniprot:Q59XL0
Length = 1086
Score = 109 (43.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 34/100 (34%), Positives = 37/100 (37%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G G + G GS G GS+ G SD G GSD G GSD G
Sbjct: 856 GSGSNNGSGNESGSGSGSGNGSGDGSNNGSG--NGSDNGTGSGNGSDNGTGSGSGSDNGS 913
Query: 63 RGMKGSEEGE-RGM-KGSDEGERGTKGSDEGERGTKGSDD 100
GS G G GSD G GS G GSD+
Sbjct: 914 GSGSGSGSGSGNGSGSGSDNGSGSGNGSGSGSGSGSGSDN 953
Score = 99 (39.9 bits), Expect = 0.00068, P = 0.00068
Identities = 35/98 (35%), Positives = 39/98 (39%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGE-RGM-KGSDE 60
G G + G G GSD G GSD G SD G GS G G GSD
Sbjct: 876 GSGDGSNNGS-G-NGSDNGTGSGNGSDNGTGSGSGSDNGSGSGSGSGSGSGNGSGSGSDN 933
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
G GS G GSD G G+ GS+ G G+
Sbjct: 934 GSGSGNGSGSGSGSGSGSDNGS-GS-GSNNGSGNGSGN 969
>WB|WBGene00000755 [details] [associations]
symbol:col-182 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002486
Pfam:PF01484 SMART:SM01088 GO:GO:0042302 HOGENOM:HOG000085656
GeneTree:ENSGT00530000065996 EMBL:Z68009 RefSeq:NP_510110.2
STRING:Q21855 EnsemblMetazoa:R09A8.4 GeneID:187723
KEGG:cel:CELE_R09A8.4 UCSC:R09A8.4 CTD:187723 WormBase:R09A8.4
eggNOG:NOG294892 OMA:EDAGYCK Uniprot:Q21855
Length = 273
Score = 101 (40.6 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 36/97 (37%), Positives = 47/97 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G +GE G +GS G G D G + ++ EGE+G G EG RG KG G G
Sbjct: 149 GNQGDQGEIGREGSP-GAQGAPG-DMG-MMGEAGKEGEKGAPGR-EGVRGEKGPS-GPPG 203
Query: 65 MKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
+ G G +G G+ G G+ G EGE+G G D
Sbjct: 204 LPGLV-GPKGFSGNS-GPPGSPGEPGPEGEQGPAGKD 238
>WB|WBGene00000630 [details] [associations]
symbol:col-53 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00610000086159 EMBL:FO081397
RefSeq:NP_491651.3 ProteinModelPortal:E5QCF2 SMR:E5QCF2
EnsemblMetazoa:M01A12.1 GeneID:172222 KEGG:cel:CELE_M01A12.1
CTD:172222 WormBase:M01A12.1 OMA:CESCPPP Uniprot:E5QCF2
Length = 278
Score = 101 (40.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 37/93 (39%), Positives = 45/93 (48%)
Query: 11 GERGMKGSD--EGKYVMKGSDKGEYVMKS--SDEGERGMKGSDEGERGMKGSDEGERGMK 66
GERG KG G G YV +GE G +G GE+G G D GE G+
Sbjct: 164 GERGDKGFPGVAGPAGEPGEPGHIYVSDGPPGKDGETGPRGPP-GEKGRTGRD-GEDGLP 221
Query: 67 GSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
G E GERG +G + G+RG G+ G G KG
Sbjct: 222 G-ERGERGYQGLKGEIGKRGPVGTF-GPIGPKG 252
Score = 98 (39.6 bits), Expect = 0.00013, P = 0.00013
Identities = 42/109 (38%), Positives = 52/109 (47%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKS--SDEGERGMKG-----SDEGERGMKG 57
GR EG G KGS +G+ G +G+ S + GERG KG GE G G
Sbjct: 128 GRPGREGGDGPKGS-KGQRGRTGQ-QGDSAPPSIRGEPGERGDKGFPGVAGPAGEPGEPG 185
Query: 58 ----SD-----EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
SD +GE G +G GE+G G D GE G G + GERG +G
Sbjct: 186 HIYVSDGPPGKDGETGPRGPP-GEKGRTGRD-GEDGLPG-ERGERGYQG 231
>UNIPROTKB|E1C8K6 [details] [associations]
symbol:COLEC10 "Collectin-10" species:9031 "Gallus gallus"
[GO:0005581 "collagen" evidence=IEA] [GO:0005537 "mannose binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001304 Pfam:PF00059 PROSITE:PS50041 SMART:SM00034
GO:GO:0005737 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 PROSITE:PS00615 GO:GO:0005537
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 InterPro:IPR018378
GeneTree:ENSGT00700000104102 EMBL:AADN02022600 EMBL:AADN02022601
EMBL:AADN02022602 IPI:IPI00822920 Ensembl:ENSGALT00000036590
OMA:VCSTHTI ArrayExpress:E1C8K6 Uniprot:E1C8K6
Length = 280
Score = 101 (40.6 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSEE 70
G +G+KG D+G+ KG D+GE V K G +G KG+ +G G D G++GM G +
Sbjct: 47 GPKGVKG-DDGE---KG-DRGE-VGKQGKVGPKGPKGN----KGTVG-DVGDQGMLG-KI 94
Query: 71 GERGMKGSDEGERGTKGSDEGERGTKGS 98
G G KG D+G +G G G++G G+
Sbjct: 95 GPIGGKG-DKGAKGISGVS-GKKGKAGT 120
>WB|WBGene00003057 [details] [associations]
symbol:lon-3 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040015
"negative regulation of multicellular organism growth"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IGI]
[GO:0060107 "annuli extracellular matrix" evidence=IDA] [GO:0060102
"collagen and cuticulin-based cuticle extracellular matrix"
evidence=IDA] [GO:0042329 "structural constituent of collagen and
cuticulin-based cuticle" evidence=ISS] InterPro:IPR002486
Pfam:PF01484 SMART:SM01088 GO:GO:0010171 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0040015 GO:GO:0042329
HOGENOM:HOG000085656 GO:GO:0060107 EMBL:Z78201 EMBL:AF262406
EMBL:AF465981 PIR:T28032 RefSeq:NP_506061.1 UniGene:Cel.9308
ProteinModelPortal:Q23628 DIP:DIP-25736N IntAct:Q23628
MINT:MINT-1079393 STRING:Q23628 EnsemblMetazoa:ZK836.1
GeneID:179673 KEGG:cel:CELE_ZK836.1 UCSC:ZK836.1 CTD:179673
WormBase:ZK836.1 eggNOG:NOG252255 GeneTree:ENSGT00390000012316
InParanoid:Q23628 OMA:QGCFTCP NextBio:906398 Uniprot:Q23628
Length = 324
Score = 102 (41.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 36/92 (39%), Positives = 46/92 (50%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD-EGERGMKG 67
G RGM+G+ G+ G D G+ M + G G G D G GMKG D E G +G
Sbjct: 182 GIRGMRGA-RGQPGYPGRD-GQPGMPG-EMGPTGAPGDDGAPGASGMKGDDAEKPVGRQG 238
Query: 68 SEEGERGMKGSDEGERGTKGSD--EGERGTKG 97
+ G+ G +G D GE G G D EG G +G
Sbjct: 239 -QRGQPGEQGPD-GEEGPAGKDAFEGPPGVEG 268
Score = 94 (38.1 bits), Expect = 0.00047, P = 0.00047
Identities = 33/94 (35%), Positives = 47/94 (50%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EGERGMKGS 68
G +G +G+ G M+G+ +G+ D G+ GM G + G G G D G GMKG
Sbjct: 173 GPQGSQGAP-GIRGMRGA-RGQPGYPGRD-GQPGMPG-EMGPTGAPGDDGAPGASGMKGD 228
Query: 69 E-EGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
+ E G +G G+ G +G D GE G G D +
Sbjct: 229 DAEKPVGRQGQ-RGQPGEQGPD-GEEGPAGKDAF 260
Score = 94 (38.1 bits), Expect = 0.00047, P = 0.00047
Identities = 36/107 (33%), Positives = 48/107 (44%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSD------EGERGMKGSD--EGERG 54
G EGE+G G D +G G D + + S +G G +GS G RG
Sbjct: 126 GPDGEEGEQGPDGQDGVDGVPGFDGQDCPDVEQQPSQGCFTCPQGLPGPQGSQGAPGIRG 185
Query: 55 MKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGSD 99
M+G+ G+ G G +G+ GM G + G G G D G G KG D
Sbjct: 186 MRGA-RGQPGYPG-RDGQPGMPG-EMGPTGAPGDDGAPGASGMKGDD 229
>WB|WBGene00010446 [details] [associations]
symbol:K01A6.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
GO:GO:0009792 GO:GO:0040010 GO:GO:0040011
GeneTree:ENSGT00570000079107 EMBL:Z68750 PIR:T23158
RefSeq:NP_502223.1 UniGene:Cel.12698 ProteinModelPortal:Q21073
IntAct:Q21073 STRING:Q21073 EnsemblMetazoa:K01A6.4 GeneID:186823
KEGG:cel:CELE_K01A6.4 UCSC:K01A6.4 CTD:186823 WormBase:K01A6.4
OMA:YGGGNQS NextBio:933118 Uniprot:Q21073
Length = 284
Score = 101 (40.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 3 GKGRSVHEGERGMKGSDEG-KYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
G G + +G+ G +G G + +G +G + +SS G G +G G+ G GS
Sbjct: 184 GFGMNSQQGDFGGQGQQSGFEGNTQGHSQGGFGGQSSS-GFGGQQGGQGGQGGFGGSTR- 241
Query: 62 ERGMKGSEEGERGMKG-SDEGERGTKGSDEGERGTKGSDD 100
GM+G + G+ G G G G +G G+ G+ G+++
Sbjct: 242 TGGMQGGQGGQSGSSGFGGFGGLGQEGQQGGQEGSNGNNN 281
>UNIPROTKB|Q21073 [details] [associations]
symbol:K01A6.4 "Protein K01A6.4" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0009792 GO:GO:0040010 GO:GO:0040011
GeneTree:ENSGT00570000079107 EMBL:Z68750 PIR:T23158
RefSeq:NP_502223.1 UniGene:Cel.12698 ProteinModelPortal:Q21073
IntAct:Q21073 STRING:Q21073 EnsemblMetazoa:K01A6.4 GeneID:186823
KEGG:cel:CELE_K01A6.4 UCSC:K01A6.4 CTD:186823 WormBase:K01A6.4
OMA:YGGGNQS NextBio:933118 Uniprot:Q21073
Length = 284
Score = 101 (40.6 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/100 (29%), Positives = 49/100 (49%)
Query: 3 GKGRSVHEGERGMKGSDEG-KYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
G G + +G+ G +G G + +G +G + +SS G G +G G+ G GS
Sbjct: 184 GFGMNSQQGDFGGQGQQSGFEGNTQGHSQGGFGGQSSS-GFGGQQGGQGGQGGFGGSTR- 241
Query: 62 ERGMKGSEEGERGMKG-SDEGERGTKGSDEGERGTKGSDD 100
GM+G + G+ G G G G +G G+ G+ G+++
Sbjct: 242 TGGMQGGQGGQSGSSGFGGFGGLGQEGQQGGQEGSNGNNN 281
>MGI|MGI:1915803 [details] [associations]
symbol:Col6a4 "collagen, type VI, alpha 4" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005576 "extracellular region" evidence=IDA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0070208 "protein
heterotrimerization" evidence=IDA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 MGI:MGI:1915803 GO:GO:0005576
GO:GO:0043234 GO:GO:0007155 GO:GO:0005581 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 KO:K06238
GeneTree:ENSGT00530000063022 eggNOG:NOG237718 EMBL:AB370265
EMBL:AM231151 EMBL:AM231152 EMBL:AM231153 EMBL:AC120386
IPI:IPI00828867 RefSeq:NP_081039.2 UniGene:Mm.28854
ProteinModelPortal:A2AX52 SMR:A2AX52 STRING:A2AX52
PhosphoSite:A2AX52 PRIDE:A2AX52 Ensembl:ENSMUST00000121963
GeneID:68553 KEGG:mmu:68553 UCSC:uc012gzq.1 CTD:68553
HOGENOM:HOG000111864 HOVERGEN:HBG107742 InParanoid:A9CR35
OMA:GHTEFLL OrthoDB:EOG476JZ9 NextBio:327440 Bgee:A2AX52
Genevestigator:A2AX52 Uniprot:A2AX52
Length = 2309
Score = 112 (44.5 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 35/99 (35%), Positives = 54/99 (54%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD-- 59
+G GE+G +G D G G ++G++ + G G++G + G RG KG+
Sbjct: 1416 RGEPGSRGEQGERGLD-GLPGHPG-EEGDHGQRGP-RGLPGLRGEEGCPGVRGPKGARGF 1472
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGS 98
GE+G G EEG G+ G ++G+RG G GE+G+ GS
Sbjct: 1473 SGEKGNPG-EEGVGGLDG-EQGDRGAAGPS-GEKGSSGS 1508
Score = 109 (43.4 bits), Expect = 0.00013, P = 0.00013
Identities = 38/101 (37%), Positives = 47/101 (46%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD 59
KG GERG +G G+ + G D Y + +GE G G +GE G G
Sbjct: 1645 KGEVGPAGERGPRGQQGPRGQPGLFGPDGHGYPGRKGRKGEPGFPGYPGVQGEDGNPGRG 1704
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
GE+G KG G+RG G G GT G G+ GTKGS
Sbjct: 1705 -GEKGAKGIR-GKRGNSGFP-GLAGTPGDQGPPGKMGTKGS 1742
Score = 101 (40.6 bits), Expect = 0.00095, P = 0.00095
Identities = 39/108 (36%), Positives = 52/108 (48%)
Query: 2 KG-KGRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDE--GERGMKGSDEGERGMK 56
KG KGR H+G G G + G +GS G + + GE G GS GE G
Sbjct: 1543 KGEKGRRGHQGSPGFHGPLGEAGSVGPRGS-LGRHGLPGLKGVLGETGELGS-RGEPGHP 1600
Query: 57 GSDEGERGMKG-----SEEGERGMKGSD--EGERGTKGSDEGERGTKG 97
G +G RG +G ++G+ G +G+ G G+KG D G RG KG
Sbjct: 1601 GP-QGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGPD-GPRGLKG 1646
>MGI|MGI:2672118 [details] [associations]
symbol:Col27a1 "collagen, type XXVII, alpha 1" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005583 "fibrillar
collagen" evidence=IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 MGI:MGI:2672118 GO:GO:0046872 InterPro:IPR008985
SUPFAM:SSF49899 InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793
InterPro:IPR001791 PROSITE:PS50025 EMBL:AL683828 HSSP:Q15201
GO:GO:0005201 HOGENOM:HOG000085654 KO:K06236 GO:GO:0005583
SMART:SM00210 HOVERGEN:HBG098141 GeneTree:ENSGT00700000104301
CTD:85301 OrthoDB:EOG4FBHSB EMBL:AY167568 EMBL:AL691496
EMBL:AK173283 IPI:IPI00408491 RefSeq:NP_079961.3 UniGene:Mm.194116
ProteinModelPortal:Q5QNQ9 STRING:Q5QNQ9 PhosphoSite:Q5QNQ9
PRIDE:Q5QNQ9 Ensembl:ENSMUST00000036300 GeneID:373864
KEGG:mmu:373864 UCSC:uc008tfs.1 InParanoid:Q5QNQ9 OMA:YSYPDRL
ChiTaRS:COL27A1 NextBio:400955 Bgee:Q5QNQ9 CleanEx:MM_COL27A1
Genevestigator:Q5QNQ9 Uniprot:Q5QNQ9
Length = 1845
Score = 111 (44.1 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 41/106 (38%), Positives = 50/106 (47%)
Query: 2 KGK-GRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKG--SDEGERGMKG 57
KG G + H GE+G G EG KG + + D G +G +G G G+ G
Sbjct: 696 KGHPGAAGHPGEQGQPGP-EGSPGAKGYPGRQGFPGPVGDPGPKGSRGYIGLPGLFGLPG 754
Query: 58 SDEGERGMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
SD GERG+ G + GE G G D GERG G D GE G G
Sbjct: 755 SD-GERGLPGVPGKRGEMGRPGFPGDFGERGPPGLDGNPGEIGLPG 799
Score = 105 (42.0 bits), Expect = 0.00028, P = 0.00028
Identities = 36/104 (34%), Positives = 49/104 (47%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKG--SDEGERGMKGS-- 58
G + + G +G+ G G KG D+GE G G +G D G+RG G
Sbjct: 1291 GLAGYNGHKGITGPLGPPGPKGEKG-DQGEDGKTEGPPGPPGDRGPVGDRGDRGEPGDPG 1349
Query: 59 ---DEGERGMKGSEEGERGMKG--SDEGERGTKGSDEGERGTKG 97
EG +G++G E G++G G G G KGS +GE G KG
Sbjct: 1350 YPGQEGVQGLRG-EPGQQGQPGHPGPRGRPGPKGS-KGEEGPKG 1391
Score = 101 (40.6 bits), Expect = 0.00075, P = 0.00075
Identities = 39/103 (37%), Positives = 49/103 (47%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
GR H+G G G ++G+ +GS KG Y + G G G +G RG G
Sbjct: 691 GRKGHKGHPGAAGHPGEQGQPGPEGSPGAKG-YPGRQGFPGPVGDPGP-KGSRGYIGLP- 747
Query: 61 GERGMKGSEEGERGMKG--SDEGERGTKG--SDEGERGTKGSD 99
G G+ GS+ GERG+ G GE G G D GERG G D
Sbjct: 748 GLFGLPGSD-GERGLPGVPGKRGEMGRPGFPGDFGERGPPGLD 789
Score = 100 (40.3 bits), Expect = 0.00096, P = 0.00096
Identities = 36/103 (34%), Positives = 53/103 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKG-- 57
+G EG+ G G D +G G D GE+ ++G+ G+KG D G G+ G
Sbjct: 1170 RGEPGLEGDHGPVGPDGLKGDRGDPGPD-GEH----GEKGQEGLKGEDGSPGPPGITGVP 1224
Query: 58 SDEGERGMKGSEEGERGMKGSDEGERGTKGSD--EGERGTKGS 98
EG+ G +G E+G+RG KG+ +G +G G GE G G+
Sbjct: 1225 GREGKPGKQG-EKGQRGAKGA-KGHQGYLGEMGIPGEPGPPGT 1265
>UNIPROTKB|J9NUC9 [details] [associations]
symbol:HMGN5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0031492 "nucleosomal DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000785
"chromatin" evidence=IEA] InterPro:IPR000079 Pfam:PF01101
PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527 GO:GO:0005634
GO:GO:0000785 GO:GO:0031492 GeneTree:ENSGT00690000102194
EMBL:AAEX03026575 Ensembl:ENSCAFT00000044595 OMA:DEMEENT
Uniprot:J9NUC9
Length = 287
Score = 101 (40.6 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 36/106 (33%), Positives = 49/106 (46%)
Query: 2 KGKG-RSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMK--GSD--EGERGMK 56
KGKG S E E+ K DE K G KGE V + +E + G K G D E E G
Sbjct: 178 KGKGANSKEEEEKEKKKGDE-KEGEDGKGKGEDVKEFENEKDTGEKKQGDDRKENEDGRV 236
Query: 57 GSD--EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSDD 100
D E +RG K ++G K +E G+ +G+ G G ++
Sbjct: 237 DKDGKEEKRGNKEEVGNKKGGKEKEEDGAEENGNGDGKDGRNGKEN 282
>UNIPROTKB|F1PG08 [details] [associations]
symbol:COL5A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005581 "collagen" evidence=IEA] [GO:0005201
"extracellular matrix structural constituent" evidence=IEA]
InterPro:IPR000885 InterPro:IPR001007 Pfam:PF00093 Pfam:PF01410
ProDom:PD002078 PROSITE:PS01208 PROSITE:PS50184 PROSITE:PS51461
SMART:SM00038 SMART:SM00214 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GeneTree:ENSGT00660000095287
EMBL:AAEX03017882 EMBL:AAEX03017883 EMBL:AAEX03017884
Ensembl:ENSCAFT00000023545 OMA:ETCNGLD Uniprot:F1PG08
Length = 1499
Score = 110 (43.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+GE G KG + G + ++G + +EG+RG +G D G G GS GERG G+
Sbjct: 476 KGEAGPKG-EPGPHGIQGP-----IGPPGEEGKRGPRG-DPGTVGPPGS-MGERGAPGN- 526
Query: 70 EGERGMKGSDEGERGTKGSDEGERGTKGS 98
RG GSD G G KG+ +GERG GS
Sbjct: 527 ---RGFPGSD-GLPGPKGA-QGERGPVGS 550
>UNIPROTKB|F1PXE8 [details] [associations]
symbol:COL27A1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005581 "collagen" evidence=IEA]
[GO:0005201 "extracellular matrix structural constituent"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0005201 GeneTree:ENSGT00700000104301
EMBL:AAEX03008102 EMBL:AAEX03008103 EMBL:AAEX03008104
EMBL:AAEX03008105 EMBL:AAEX03008106 Ensembl:ENSCAFT00000005319
OMA:LHTGPNT Uniprot:F1PXE8
Length = 1373
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 39/103 (37%), Positives = 50/103 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMK--G--SDKGEYVMKSSDE-GERGMKGSD---EGERGMK 56
GR +GE G+ G D K +M G KGE + E G RG +G D EG G
Sbjct: 790 GRMGAQGEPGLAGYDGHKGIMGPLGPPGPKGEKAVPPRPETGTRGEQGEDGKAEGPPGPP 849
Query: 57 GS--DEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G+RG +G E G+ G G EG G +G D G++G G
Sbjct: 850 GDRGSVGDRGDRG-EPGDPGYPGQ-EGVPGLRG-DPGQQGLPG 889
Score = 99 (39.9 bits), Expect = 0.00088, P = 0.00088
Identities = 41/104 (39%), Positives = 49/104 (47%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKG-SDKGEYVMKSSDEGERGMKGSD--EGERGMKG 57
KG G + H GE+G G EG KG + S+ G G GS +G G G
Sbjct: 88 KGYPGPAGHPGEQGQPGP-EGSPGAKGYPGRQSPPPPSTPPGLWGRVGSSVFQGLPGPVG 146
Query: 58 SDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
D G +G +G G G+ GSD GERG G D GERG G D
Sbjct: 147 -DPGPKGSRGYIGLPGLFGLPGSD-GERGFPG-DFGERGPPGLD 187
Score = 98 (39.6 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 34/95 (35%), Positives = 47/95 (49%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSD-EGERGMKGSDEGERGMKGSDE--GERGMK 66
EG+ G G D K + + D +G+RG G D GERG KG + GE G
Sbjct: 665 EGDSGPAGPDGLKSRIPPPAPPPRAHCAGDPQGDRGDPGPD-GERGDKGQEGLMGEDGPP 723
Query: 67 GSEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G G G++G EG+ G +G ++G G KG+ Y
Sbjct: 724 GPP-GITGVRGP-EGKPGKQG-EKGRTGAKGAKGY 755
Score = 89 (36.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 33/94 (35%), Positives = 43/94 (45%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSD--EGERGMKGSD--EGERGMKGSDEGERGMK 66
GE GMKG D G G ++G +S G RG+ G EG+ G G D + +
Sbjct: 624 GEAGMKG-DLGPLGPPG-EQGLIGQRSRALLPGARGLAGEPGLEGDSGPAGPDGLKSRIP 681
Query: 67 GSEEGERG-MKGSDEGERGTKGSDEGERGTKGSD 99
R G +G+RG G D GERG KG +
Sbjct: 682 PPAPPPRAHCAGDPQGDRGDPGPD-GERGDKGQE 714
Score = 37 (18.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 5 GRSVHEGERGMKG 17
GR H GE+G+ G
Sbjct: 423 GRPGHVGEQGLLG 435
>MGI|MGI:2388361 [details] [associations]
symbol:Gldn "gliomedin" species:10090 "Mus musculus"
[GO:0005581 "collagen" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0032528 "microvillus organization" evidence=IMP] [GO:0045162
"clustering of voltage-gated sodium channels" evidence=IMP]
[GO:0086080 "protein binding involved in heterotypic cell-cell
adhesion" evidence=IGI] InterPro:IPR003112 Pfam:PF02191
PROSITE:PS51132 SMART:SM00284 MGI:MGI:2388361 GO:GO:0016021
GO:GO:0005886 GO:GO:0005615 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 GO:GO:0045162 CTD:342035 eggNOG:NOG298097
HOGENOM:HOG000112733 HOVERGEN:HBG081557 KO:K16364 OMA:VTFAFDL
OrthoDB:EOG4THVTK EMBL:AK031523 EMBL:AF548022 IPI:IPI00223023
RefSeq:NP_796324.1 UniGene:Mm.123549 ProteinModelPortal:Q8BMF8
STRING:Q8BMF8 PhosphoSite:Q8BMF8 PRIDE:Q8BMF8
Ensembl:ENSMUST00000056740 GeneID:235379 KEGG:mmu:235379
UCSC:uc009pqx.1 GeneTree:ENSGT00660000095267 InParanoid:Q8BMF8
NextBio:382629 Bgee:Q8BMF8 CleanEx:MM_GLDN Genevestigator:Q8BMF8
GO:GO:0086080 GO:GO:0032528 Uniprot:Q8BMF8
Length = 549
Score = 105 (42.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G + +G+ G++G K + K + + GE+G KG D GE G+ G+ EG G
Sbjct: 154 GHNGSDGQPGLQGPKGEKGAIGKRGKMGLPGATGNPGEKGEKG-DAGELGLPGN-EGPPG 211
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
KG ++G++G +D G KG D+G G G
Sbjct: 212 QKG-DKGDKGDVSNDVLLTGAKG-DQGPPGPPG 242
>RGD|727879 [details] [associations]
symbol:Gldn "gliomedin" species:10116 "Rattus norvegicus"
[GO:0005581 "collagen" evidence=IEA] [GO:0005615 "extracellular
space" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0032528
"microvillus organization" evidence=ISO] [GO:0045162 "clustering of
voltage-gated sodium channels" evidence=ISO] [GO:0086080 "protein
binding involved in heterotypic cell-cell adhesion" evidence=ISO]
InterPro:IPR003112 Pfam:PF02191 PROSITE:PS51132 SMART:SM00284
RGD:727879 GO:GO:0016021 GO:GO:0005886 GO:GO:0005615 GO:GO:0007399
GO:GO:0030154 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
CTD:342035 eggNOG:NOG298097 HOGENOM:HOG000112733 HOVERGEN:HBG081557
KO:K16364 OrthoDB:EOG4THVTK EMBL:AY266116 IPI:IPI00331891
RefSeq:NP_852047.1 UniGene:Rn.38054 STRING:Q80WL1 PRIDE:Q80WL1
GeneID:315675 KEGG:rno:315675 UCSC:RGD:727879 InParanoid:Q80WL1
NextBio:669645 Genevestigator:Q80WL1 Uniprot:Q80WL1
Length = 549
Score = 105 (42.0 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 31/93 (33%), Positives = 48/93 (51%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERG 64
G + +G+ G++G K + K + + GE+G KG D GE G+ G+ EG G
Sbjct: 154 GHNGSDGQPGLQGPKGEKGAVGKRGKMGLPGATGNPGEKGEKG-DAGELGLPGN-EGPPG 211
Query: 65 MKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
KG ++G++G +D G KG D+G G G
Sbjct: 212 QKG-DKGDKGDVSNDVLLTGAKG-DQGPPGPPG 242
>UNIPROTKB|P15988 [details] [associations]
symbol:COL6A2 "Collagen alpha-2(VI) chain" species:9031
"Gallus gallus" [GO:0005581 "collagen" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0042383 "sarcolemma" evidence=IEA] [GO:0043234
"protein complex" evidence=IEA] [GO:0070208 "protein
heterotrimerization" evidence=IEA] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 GO:GO:0005615 GO:GO:0043234
GO:GO:0007155 GO:GO:0042383 GO:GO:0005581 GO:GO:0070208
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG256042
HOGENOM:HOG000111863 KO:K06238 GeneTree:ENSGT00530000063022
EMBL:X15041 EMBL:X56659 EMBL:X56595 EMBL:J04425 EMBL:J05475
IPI:IPI00586821 IPI:IPI00600978 PIR:S23377 PIR:S23378
RefSeq:NP_990679.1 UniGene:Gga.4257 UniGene:Gga.48694
ProteinModelPortal:P15988 STRING:P15988 PRIDE:P15988
Ensembl:ENSGALT00000009887 GeneID:396292 KEGG:gga:396292 CTD:1292
HOVERGEN:HBG051051 InParanoid:P15988 OMA:RALCNHD OrthoDB:EOG45TCMN
NextBio:20816343 Uniprot:P15988
Length = 1022
Score = 108 (43.1 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 38/95 (40%), Positives = 49/95 (51%)
Query: 11 GERGMKGS--DEGKYVMKGSDKGEYVMKSSDEGERGMKG-SDEGERGMKGSDEGERGMKG 67
GE G GS D G +G D G +G+RG G S G RG +G D+GE+G G
Sbjct: 481 GEPGNIGSRGDPGDLGPRG-DAGP----PGPKGDRGRPGFSYPGPRGPQG-DKGEKGQPG 534
Query: 68 SE--EGERGMKGSDEGERGTKGS--DEGERGTKGS 98
+ GE G KG+ +G +G KG D G RG G+
Sbjct: 535 PKGGRGELGPKGT-QGTKGEKGEPGDPGPRGEPGT 568
Score = 107 (42.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 36/98 (36%), Positives = 48/98 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD--EG 61
KG G+ G KGS G KG ++G+ EG RG+ G + G +G +G G
Sbjct: 420 KGEPGRRGDPGTKGSKGGPGA-KG-ERGD----PGPEGPRGLPG-EVGNKGARGDQGLPG 472
Query: 62 ERGMKGS--EEGERGMKGSDEGERGTKGSDEGERGTKG 97
RG G+ E G G +G D G+ G +G D G G KG
Sbjct: 473 PRGPTGAVGEPGNIGSRG-DPGDLGPRG-DAGPPGPKG 508
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 36/103 (34%), Positives = 52/103 (50%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSDKGEYVMKS--SDEGERGMKGSDEGERGMKGSDE 60
G + G++G KG+ + G +KG +G+ ++ G +G+ G +GE+G GSD
Sbjct: 259 GPKGYRGQKGAKGNMGEPGSPGLKGR-QGDPGIEGPIGYPGPKGVPGL-KGEKGEIGSD- 315
Query: 61 GERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSDDY 101
G RG G G G KG G G G +G+RG KG D Y
Sbjct: 316 GRRGAAGLAGRNGTDGQKGK-LGRIGPPGC-KGDRGDKGPDGY 356
Score = 105 (42.0 bits), Expect = 0.00015, P = 0.00015
Identities = 43/109 (39%), Positives = 50/109 (45%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERG---MKGSDEGERGMKG--S 58
KG+ G G KG D G KG D G Y + D+GERG MKG D G G G
Sbjct: 333 KGKLGRIGPPGCKG-DRGD---KGPD-G-YPGDAGDQGERGDEGMKG-DPGRPGRSGPPG 385
Query: 59 DEGERGMKG-----SEEGERGMKG--SDEGERGTKGSD--EGERGTKGS 98
GE+G G +G G KG + G G KG G+ GTKGS
Sbjct: 386 PPGEKGSPGIPGNPGAQGPGGTKGRKGETGPPGPKGEPGRRGDPGTKGS 434
Score = 101 (40.6 bits), Expect = 0.00039, P = 0.00039
Identities = 38/96 (39%), Positives = 47/96 (48%)
Query: 4 KGRSVHEGERGMKGSDEGKYV--MKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEG 61
KGR G G G K V +KG +KGE + G G+ G + G G KG G
Sbjct: 282 KGRQGDPGIEGPIGYPGPKGVPGLKG-EKGE-IGSDGRRGAAGLAGRN-GTDGQKGK-LG 337
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G + G+RG KG D G G G D+GERG +G
Sbjct: 338 RIGPPGCK-GDRGDKGPD-GYPGDAG-DQGERGDEG 370
Score = 101 (40.6 bits), Expect = 0.00039, P = 0.00039
Identities = 38/100 (38%), Positives = 48/100 (48%)
Query: 1 MKG-KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD 59
+KG KG +G RG G G+ G KG K G G KG D G++G G
Sbjct: 305 LKGEKGEIGSDGRRGAAGL-AGRNGTDGQ-KG----KLGRIGPPGCKG-DRGDKGPDGYP 357
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
G+ G +G E G+ GMKG D G G G GE+G+ G
Sbjct: 358 -GDAGDQG-ERGDEGMKG-DPGRPGRSGPPGPPGEKGSPG 394
>MGI|MGI:1095396 [details] [associations]
symbol:Col16a1 "collagen, type XVI, alpha 1" species:10090
"Mus musculus" [GO:0005178 "integrin binding" evidence=ISO]
[GO:0005576 "extracellular region" evidence=IEA] [GO:0005578
"proteinaceous extracellular matrix" evidence=IEA] [GO:0005581
"collagen" evidence=IEA] [GO:0007155 "cell adhesion" evidence=ISO]
[GO:0071230 "cellular response to amino acid stimulus"
evidence=IDA] MGI:MGI:1095396 GO:GO:0007155 InterPro:IPR008985
SUPFAM:SSF49899 GO:GO:0005178 HOGENOM:HOG000085653 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
PROSITE:PS50025 GO:GO:0071230 HSSP:Q15201 SMART:SM00210
GeneTree:ENSGT00700000104155 CTD:1307 HOVERGEN:HBG071631
OMA:CEVCPTL OrthoDB:EOG47WNN3 EMBL:AK012212 EMBL:AK040971
EMBL:AL606925 IPI:IPI00648306 IPI:IPI00649075 RefSeq:NP_082542.3
UniGene:Mm.41860 ProteinModelPortal:Q8BLX7 SMR:Q8BLX7 STRING:Q8BLX7
PhosphoSite:Q8BLX7 PaxDb:Q8BLX7 PRIDE:Q8BLX7
Ensembl:ENSMUST00000044565 GeneID:107581 KEGG:mmu:107581
UCSC:uc008uys.2 UCSC:uc008uyv.2 InParanoid:Q8BLX7 NextBio:359082
Bgee:Q8BLX7 CleanEx:MM_COL16A1 Genevestigator:Q8BLX7 Uniprot:Q8BLX7
Length = 1580
Score = 110 (43.8 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 37/106 (34%), Positives = 48/106 (45%)
Query: 4 KGRSVHEGERGMKGSDEGK--YVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGS- 58
KG +G G+ G D ++ + + E + EGE G GS G GM G
Sbjct: 967 KGEKGDQGIPGVPGFDNCARCFIERERPRAEEARGDNSEGEPGCSGSPGLPGPPGMPGQR 1026
Query: 59 -DEGERGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGSDDY 101
+EG GM+GS G G G +GERG G D+GE G G Y
Sbjct: 1027 GEEGPPGMRGSP-GPPGPIGL-QGERGLTGLTGDKGEPGPPGQPGY 1070
Score = 103 (41.3 bits), Expect = 0.00039, P = 0.00039
Identities = 39/104 (37%), Positives = 52/104 (50%)
Query: 5 GRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD- 59
G+ EG GM+GS G ++G ++G + + D+GE G G G G G
Sbjct: 1024 GQRGEEGPPGMRGSPGPPGPIGLQG-ERGLTGL-TGDKGEPGPPGQPGYPGAMGPPGLPG 1081
Query: 60 -EGERGMKG--SEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
+GERG G E+GE G GS EG G +G GERG +GS
Sbjct: 1082 IKGERGYTGPSGEKGESGPPGS-EGLPGPQGPAGPRGERGPQGS 1124
>UNIPROTKB|F1S3G7 [details] [associations]
symbol:COL5A3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008201 "heparin binding" evidence=IEA] [GO:0007160
"cell-matrix adhesion" evidence=IEA] [GO:0005588 "collagen type V"
evidence=IEA] [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] InterPro:IPR000885 Pfam:PF01410
ProDom:PD002078 PROSITE:PS51461 SMART:SM00038 GO:GO:0008201
Gene3D:2.60.120.200 InterPro:IPR008985 InterPro:IPR013320
SUPFAM:SSF49899 GO:GO:0007160 InterPro:IPR008160 Pfam:PF01391
InterPro:IPR001791 PROSITE:PS50025 Pfam:PF02210 GO:GO:0005201
GO:GO:0005588 GeneTree:ENSGT00700000104155 OMA:KGDVGQD
EMBL:CU694567 Ensembl:ENSSSCT00000014931 Uniprot:F1S3G7
Length = 1614
Score = 110 (43.8 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 9 HEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGS 68
+ G RG+KG+ G ++G +KGE ++G G KG D G +G G G G +G
Sbjct: 576 YPGSRGVKGTS-GNRGLQG-EKGE----KGEDGFPGFKG-DVGPKGDWGQP-GPPGPRG- 626
Query: 69 EEGERGMKGSD--EGERGTKGSDEGERGTKG 97
E+G G+KG + GE G GS GE+G G
Sbjct: 627 EDGPEGLKGQEGLAGEEGPPGS-AGEKGKLG 656
>ZFIN|ZDB-GENE-000208-23 [details] [associations]
symbol:col11a2 "collagen type XI alpha-2"
species:7955 "Danio rerio" [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=IEA] [GO:0060536 "cartilage morphogenesis" evidence=IMP]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 ZFIN:ZDB-GENE-000208-23 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 SMART:SM00282
Pfam:PF02210 GO:GO:0005201 SMART:SM00210
GeneTree:ENSGT00700000104155 GO:GO:0060536 EMBL:FP017221
EMBL:FP085392 IPI:IPI00999186 Ensembl:ENSDART00000105754
ArrayExpress:F1R4X4 Bgee:F1R4X4 Uniprot:F1R4X4
Length = 2021
Score = 111 (44.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 42/107 (39%), Positives = 52/107 (48%)
Query: 4 KGRSVHEGERGMKGS-----DEGKYVMKG--SDKGEYVMKSSDEGERGMKGSDEGERGMK 56
+GR+ +G RGM G D G + G DKG Y + G G G D GERG
Sbjct: 783 RGRAGADGARGMPGESGIKGDRGFDGLPGLPGDKG-YRGQPGGMGPPGPHGED-GERGDD 840
Query: 57 GSDEGERGMKGSEEGERGM---KGSD--EGERGTKGSDEGERGTKGS 98
G D G RG+ G E G RG+ KG G G +G+D G G KG+
Sbjct: 841 G-DVGPRGLPG-EPGPRGLLGPKGPSGLPGPPGVRGND-GPHGPKGN 884
Score = 103 (41.3 bits), Expect = 0.00051, P = 0.00051
Identities = 35/104 (33%), Positives = 56/104 (53%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKS--SDEGERGMKG--SDEGERGMKG 57
+G H+GE+G G +G + +KG ++GE + ++G G KG GE G G
Sbjct: 975 RGLKGHKGEKGEDGFPGIKGDFGVKG-ERGEVGVPGPRGEDGPEGPKGRVGPPGEIGPLG 1033
Query: 58 --SDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
++G+ G+ G G +G+KGS G G G++ GE+GT+G
Sbjct: 1034 LLGEKGKLGVPGLPGYPGRQGIKGS-LGFPGFPGTN-GEKGTRG 1075
>RGD|2373 [details] [associations]
symbol:Col11a2 "collagen, type XI, alpha 2" species:10116 "Rattus
norvegicus" [GO:0001501 "skeletal system development"
evidence=ISO;TAS] [GO:0001503 "ossification" evidence=IDA]
[GO:0001894 "tissue homeostasis" evidence=IEA;ISO] [GO:0002062
"chondrocyte differentiation" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005201 "extracellular matrix
structural constituent" evidence=IEA] [GO:0005581 "collagen"
evidence=ISO] [GO:0005592 "collagen type XI" evidence=IDA]
[GO:0007605 "sensory perception of sound" evidence=IEA;ISO]
[GO:0030199 "collagen fibril organization" evidence=IEA;ISO]
[GO:0048705 "skeletal system morphogenesis" evidence=IEA;ISO]
[GO:0051216 "cartilage development" evidence=ISO] [GO:0060021 "palate
development" evidence=ISO] [GO:0060023 "soft palate development"
evidence=ISO] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 RGD:2373 Gene3D:2.60.120.200
InterPro:IPR008985 InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0001501
InterPro:IPR008160 Pfam:PF01391 eggNOG:NOG12793 InterPro:IPR001791
SMART:SM00282 GO:GO:0001503 EMBL:BX883042 Pfam:PF02210 GO:GO:0005201
HOGENOM:HOG000085654 HOVERGEN:HBG004933 KO:K06236 SMART:SM00210
GeneTree:ENSGT00700000104155 GO:GO:0005592 CTD:1302 IPI:IPI00417757
RefSeq:NP_997693.1 UniGene:Rn.45835 STRING:Q6MGB2
Ensembl:ENSRNOT00000045533 GeneID:294279 KEGG:rno:294279
UCSC:RGD:2373 NextBio:637878 Genevestigator:Q6MGB2 Uniprot:Q6MGB2
Length = 1617
Score = 110 (43.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G + G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 451 RGRAGADGARGMPG-EPG---VKG-DRGFDGLPGLP-GEKGQRG-DTGAQGLPGPPGEDG 503
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 504 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 536
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 38/98 (38%), Positives = 48/98 (48%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G S GERG G G+ + G+ G+ K D G G G D G G++G GE
Sbjct: 833 GESGPMGERGHPGPPGPPGEQGLPGT-AGKDGTKG-DPGPPGAPGKD-GPAGLRGFP-GE 888
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
RG+ G+ G G+KG+ EG G G GERG GS
Sbjct: 889 RGLPGTAGGP-GLKGN-EGPAGPPGPAGSPGERGAAGS 924
Score = 102 (41.0 bits), Expect = 0.00051, P = 0.00051
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 628 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPTG 686
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 687 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 728
>UNIPROTKB|Q8NFW1 [details] [associations]
symbol:COL22A1 "Collagen alpha-1(XXII) chain" species:9606
"Homo sapiens" [GO:0005581 "collagen" evidence=IEA] [GO:0005576
"extracellular region" evidence=TAS] [GO:0005788 "endoplasmic
reticulum lumen" evidence=TAS] [GO:0030198 "extracellular matrix
organization" evidence=TAS] InterPro:IPR002035 Pfam:PF00092
PROSITE:PS50234 SMART:SM00327 Reactome:REACT_118779 GO:GO:0005576
GO:GO:0030198 InterPro:IPR008985 SUPFAM:SSF49899 GO:GO:0005788
HOGENOM:HOG000085653 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
eggNOG:NOG12793 InterPro:IPR001791 PROSITE:PS50025 HSSP:Q15201
SMART:SM00210 HOVERGEN:HBG106599 EMBL:AF406780 EMBL:AC068476
EMBL:AC105130 EMBL:AC115720 EMBL:AP006262 EMBL:BC042075
EMBL:BC144535 IPI:IPI00303152 IPI:IPI00383440 IPI:IPI00945822
RefSeq:NP_690848.1 UniGene:Hs.117169 ProteinModelPortal:Q8NFW1
SMR:Q8NFW1 STRING:Q8NFW1 PhosphoSite:Q8NFW1 PaxDb:Q8NFW1
PeptideAtlas:Q8NFW1 PRIDE:Q8NFW1 DNASU:169044
Ensembl:ENST00000303045 Ensembl:ENST00000435777 GeneID:169044
KEGG:hsa:169044 UCSC:uc003yvd.3 UCSC:uc011ljo.2 CTD:169044
GeneCards:GC08M139669 H-InvDB:HIX0034283 HGNC:HGNC:22989
HPA:HPA024830 MIM:610026 neXtProt:NX_Q8NFW1 PharmGKB:PA134914705
InParanoid:Q8NFW1 KO:K16630 OMA:KRENGAQ OrthoDB:EOG4Z8XVT
PhylomeDB:Q8NFW1 GenomeRNAi:169044 NextBio:88784 Bgee:Q8NFW1
CleanEx:HS_COL22A1 Genevestigator:Q8NFW1 Uniprot:Q8NFW1
Length = 1626
Score = 110 (43.8 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 36/90 (40%), Positives = 50/90 (55%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG-- 67
+GE+G KGS G G D G M+ + GE G G GE GM+G +G G+ G
Sbjct: 526 QGEKGEKGS-LGLPGPPGRD-GSKGMRG-EPGELGEPGLP-GEVGMRGP-QGPPGLPGPP 580
Query: 68 SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G++G + GE+GT+G ++GERG G
Sbjct: 581 GRVGAPGLQG-ERGEKGTRG-EKGERGLDG 608
>WB|WBGene00001076 [details] [associations]
symbol:dpy-17 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040002 "collagen and
cuticulin-based cuticle development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR002486 Pfam:PF01484 SMART:SM01088
GO:GO:0040007 GO:GO:0002119 GO:GO:0010171 GO:GO:0040035
InterPro:IPR008160 Pfam:PF01391 GO:GO:0040002 EMBL:FO080874
GO:GO:0042302 HOGENOM:HOG000085656 GeneTree:ENSGT00390000012316
RefSeq:NP_498086.1 ProteinModelPortal:Q20778 SMR:Q20778
DIP:DIP-26150N MINT:MINT-1080630 STRING:Q20778 PaxDb:Q20778
EnsemblMetazoa:F54D8.1.1 EnsemblMetazoa:F54D8.1.2 GeneID:175696
KEGG:cel:CELE_F54D8.1 UCSC:F54D8.1.1 CTD:175696 WormBase:F54D8.1
eggNOG:NOG253878 InParanoid:Q20778 OMA:TEMEAWR NextBio:889252
Uniprot:Q20778
Length = 352
Score = 102 (41.0 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 32/91 (35%), Positives = 43/91 (47%)
Query: 11 GERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKG--S 68
G G G +EG G+D + +G G G + G++G +G D G G+ G
Sbjct: 244 GPPGAAG-EEGPTGEPGADVEHQIGLPGAKGTPGAPG-ESGDQGEQG-DRGATGIAGPPG 300
Query: 69 EEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
E G +G KG D+G G GS GE G G D
Sbjct: 301 ERGPQGEKG-DDGPNGAAGSP-GEEGEPGQD 329
>UNIPROTKB|D4A008 [details] [associations]
symbol:Col11a2 "Protein Col11a2" species:10116 "Rattus
norvegicus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005581 "collagen" evidence=IEA]
InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078 PROSITE:PS51461
SMART:SM00038 RGD:2373 Gene3D:2.60.120.200 InterPro:IPR008985
InterPro:IPR013320 SUPFAM:SSF49899 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR001791 SMART:SM00282 Pfam:PF02210
GO:GO:0005201 SMART:SM00210 IPI:IPI00558837
Ensembl:ENSRNOT00000048519 ArrayExpress:D4A008 Uniprot:D4A008
Length = 1655
Score = 110 (43.8 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 37/96 (38%), Positives = 53/96 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKG--SDEG 61
+GR+ +G RGM G + G +KG D+G + GE+G +G D G +G+ G ++G
Sbjct: 456 RGRAGADGARGMPG-EPG---VKG-DRGFDGLPGLP-GEKGQRG-DTGAQGLPGPPGEDG 508
Query: 62 ERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
ERG G E G RG+ G + G RG G +G G G
Sbjct: 509 ERGDDG-EIGPRGLPG-ESGPRGLLGP-KGPPGIPG 541
Score = 107 (42.7 bits), Expect = 0.00015, P = 0.00015
Identities = 38/98 (38%), Positives = 48/98 (48%)
Query: 5 GRSVHEGERGMKG--SDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G S GERG G G+ + G+ G+ K D G G G D G G++G GE
Sbjct: 853 GESGPMGERGHPGPPGPPGEQGLPGT-AGKDGTKG-DPGPPGAPGKD-GPAGLRGFP-GE 908
Query: 63 RGMKGSEEGERGMKGSDEGERGTKG--SDEGERGTKGS 98
RG+ G+ G G+KG+ EG G G GERG GS
Sbjct: 909 RGLPGTAGGP-GLKGN-EGPAGPPGPAGSPGERGAAGS 944
Score = 102 (41.0 bits), Expect = 0.00052, P = 0.00052
Identities = 36/105 (34%), Positives = 54/105 (51%)
Query: 4 KGRSVHEGERGMKGSD--EGKYVMKGSDKGEYVMKSS--DEGERGMKG-----SDEGERG 54
+G H+GE+G G +G +KG D+GE + S ++G G KG D G G
Sbjct: 648 RGLKGHKGEKGEDGFPGFKGDIGVKG-DRGEVGVPGSRGEDGPEGPKGRTGPTGDPGPTG 706
Query: 55 MKGSDEGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+ G ++G+ G+ G G +G KGS G G G+ GE+G +G
Sbjct: 707 LMG-EKGKLGVPGLPGYPGRQGPKGS-LGFPGFPGAS-GEKGARG 748
Score = 100 (40.3 bits), Expect = 0.00085, P = 0.00085
Identities = 37/103 (35%), Positives = 45/103 (43%)
Query: 4 KGRSVHEGERGMKG--SDEGKYVMKGSDKGE-YVMKSSDEGERGMKGSDEGERGMKGSDE 60
KG S GE G G G KG+ + GE G +G D G +G +G D
Sbjct: 1158 KGESGQAGEAGPPGPKGPTGDDGPKGNPGPVGFPGDPGPPGEAGPRGQD-GAKGSQGED- 1215
Query: 61 GERGMKGSE--EGERGMKG--SDEGERGTKGSD--EGERGTKG 97
GE G GS GE G G G GT G + +GE+G KG
Sbjct: 1216 GEPGQPGSPGPTGENGPPGPLGKRGPAGTPGPEGRQGEKGAKG 1258
>UNIPROTKB|Q5TAT6 [details] [associations]
symbol:COL13A1 "Collagen alpha-1(XIII) chain" species:9606
"Homo sapiens" [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005600 "collagen type XIII" evidence=TAS]
[GO:0005201 "extracellular matrix structural constituent"
evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007160 "cell-matrix adhesion" evidence=IPI] [GO:0001958
"endochondral ossification" evidence=ISS] [GO:0001763
"morphogenesis of a branching structure" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=IEP] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005576 "extracellular region" evidence=TAS]
[GO:0005788 "endoplasmic reticulum lumen" evidence=TAS] [GO:0030198
"extracellular matrix organization" evidence=TAS]
Reactome:REACT_118779 GO:GO:0016021 GO:GO:0005886 GO:GO:0030154
GO:GO:0030198 GO:GO:0008201 GO:GO:0005911 GO:GO:0005788
GO:GO:0016337 GO:GO:0007160 HOGENOM:HOG000085653 InterPro:IPR008160
Pfam:PF01391 DrugBank:DB01076 DrugBank:DB00641 GO:GO:0001958
GO:GO:0005201 HOVERGEN:HBG004933 EMBL:AJ293624 EMBL:AL138925
EMBL:AC024601 EMBL:AC025426 EMBL:BC136385 EMBL:M59217 EMBL:M33653
EMBL:M15524 EMBL:M20803 EMBL:M20795 EMBL:M20796 EMBL:M20797
EMBL:M20798 EMBL:M20799 EMBL:M20800 EMBL:M20801 EMBL:M20802
EMBL:M20804 EMBL:M20805 IPI:IPI00299472 IPI:IPI00375408
IPI:IPI00375412 IPI:IPI00375413 IPI:IPI00375414 IPI:IPI00375417
IPI:IPI00377036 IPI:IPI00383356 IPI:IPI00844070 IPI:IPI01008962
PIR:B40983 RefSeq:NP_001123575.1 RefSeq:NP_542988.3
RefSeq:NP_542990.3 RefSeq:NP_542991.3 RefSeq:NP_542992.3
UniGene:Hs.695934 ProteinModelPortal:Q5TAT6 STRING:Q5TAT6
PhosphoSite:Q5TAT6 DMDM:74745860 PaxDb:Q5TAT6 PRIDE:Q5TAT6
Ensembl:ENST00000354547 Ensembl:ENST00000357811
Ensembl:ENST00000398978 Ensembl:ENST00000517713
Ensembl:ENST00000520267 Ensembl:ENST00000522165 GeneID:1305
KEGG:hsa:1305 UCSC:uc001jqk.2 UCSC:uc001jql.3 UCSC:uc021prz.1
UCSC:uc021psc.1 CTD:1305 GeneCards:GC10P071561 H-InvDB:HIX0025928
HGNC:HGNC:2190 HPA:HPA050392 MIM:120350 neXtProt:NX_Q5TAT6
PharmGKB:PA26706 eggNOG:NOG254293 KO:K16617 OMA:TSPGCHC
OrthoDB:EOG4894NC GenomeRNAi:1305 NextBio:5305 ArrayExpress:Q5TAT6
Bgee:Q5TAT6 Genevestigator:Q5TAT6 GO:GO:0005600 GO:GO:0001763
Uniprot:Q5TAT6
Length = 717
Score = 106 (42.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/97 (35%), Positives = 54/97 (55%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD-EGERGMKGSDEGE 62
KG + H G G KG ++G+ GS GE + GE+G G++ G G +G G
Sbjct: 526 KGENGHPGSPGEKG-EKGETGQAGSP-GE----KGEAGEKGNPGAEVPGLPGPEGPP-GP 578
Query: 63 RGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G++G +GE G+ G+ +GE+G +G ++G+RG G
Sbjct: 579 PGLQGVPGPKGEAGLDGA-KGEKGFQG-EKGDRGPLG 613
>WB|WBGene00000694 [details] [associations]
symbol:col-120 species:6239 "Caenorhabditis elegans"
[GO:0042302 "structural constituent of cuticle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR002486
Pfam:PF01484 SMART:SM01088 GO:GO:0042302 HOGENOM:HOG000085656
GeneTree:ENSGT00610000086159 EMBL:AL032632 PIR:T26465
RefSeq:NP_501617.1 ProteinModelPortal:Q9XWR2 DIP:DIP-26936N
IntAct:Q9XWR2 MINT:MINT-1070946 STRING:Q9XWR2
EnsemblMetazoa:Y11D7A.11 GeneID:177748 KEGG:cel:CELE_Y11D7A.11
UCSC:Y11D7A.11 CTD:177748 WormBase:Y11D7A.11 eggNOG:NOG265281
InParanoid:Q9XWR2 OMA:HWELLED NextBio:898216 Uniprot:Q9XWR2
Length = 313
Score = 101 (40.6 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 36/98 (36%), Positives = 48/98 (48%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDK-----GEYVMKSSDEGERGMKGSDEGERGMKGSD 59
GR +GERG G D G+ +G D E ++ G RG G+ G +G +G+D
Sbjct: 202 GRPGEQGERGPNGED-GRPGRRGDDGMPGTVNEIPGQAGPPGLRGAPGAT-GSQGPRGND 259
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G G KG G G +G D G G G+D GE G +G
Sbjct: 260 -GRPGNKGPA-GPPGDQGFD-GAPGGPGAD-GEPGAQG 293
Score = 92 (37.4 bits), Expect = 0.00074, P = 0.00074
Identities = 32/97 (32%), Positives = 40/97 (41%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSD--EGERGMKGSD--E 60
GR +G G G D + S G + G G G+ +G G G D
Sbjct: 136 GRDGIDGPAGKPGRDGQDLDGESSSDGSQIELDCPAGPPGPPGNPGPQGNSGRPGMDGMP 195
Query: 61 GERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGT 95
G G G E+GERG G D G G +G D+G GT
Sbjct: 196 GRNGRCGRPGEQGERGPNGED-GRPGRRG-DDGMPGT 230
>MGI|MGI:3606482 [details] [associations]
symbol:Colec10 "collectin sub-family member 10"
species:10090 "Mus musculus" [GO:0005537 "mannose binding"
evidence=IDA] [GO:0005576 "extracellular region" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0005634 "nucleus"
evidence=NAS] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005829
"cytosol" evidence=NAS] [GO:0006952 "defense response"
evidence=NAS] [GO:0007157 "heterophilic cell-cell adhesion"
evidence=NAS] [GO:0009790 "embryo development" evidence=NAS]
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 MGI:MGI:3606482
GO:GO:0005829 GO:GO:0005634 GO:GO:0006952 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0009790 GO:GO:0005537 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0007157 InterPro:IPR018378
HOVERGEN:HBG108270 HOGENOM:HOG000085660 CTD:10584 eggNOG:NOG237489
GeneTree:ENSGT00700000104102 KO:K10065 HSSP:P08661 OMA:FVCEFIK
OrthoDB:EOG42822F EMBL:AB016429 EMBL:AK028423 EMBL:BC106836
EMBL:BC106837 EMBL:BC108945 IPI:IPI00318904 RefSeq:NP_775598.2
UniGene:Mm.82400 ProteinModelPortal:Q8CF98 SMR:Q8CF98 STRING:Q8CF98
PhosphoSite:Q8CF98 PRIDE:Q8CF98 Ensembl:ENSMUST00000036737
GeneID:239447 KEGG:mmu:239447 UCSC:uc007vrl.1 InParanoid:Q8CF98
NextBio:384131 Bgee:Q8CF98 CleanEx:MM_COLEC10 Genevestigator:Q8CF98
Uniprot:Q8CF98
Length = 277
Score = 100 (40.3 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 39 DEGERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGS--DEGERGTKGSDEGERGTK 96
D+GERG G +EG+ G G +G +G+KG E G+ G +G+ G G KG D+GE+G
Sbjct: 51 DDGERGDTG-EEGKDGKVGR-QGPKGVKG-ELGDMGAQGNIGKSGPIGKKG-DKGEKGLL 106
Query: 97 G 97
G
Sbjct: 107 G 107
>ASPGD|ASPL0000072001 [details] [associations]
symbol:dfgG species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR008928 InterPro:IPR012341 Pfam:PF03663
GO:GO:0003824 GO:GO:0008152 SUPFAM:SSF48208 EMBL:BN001303
Gene3D:1.50.10.10 InterPro:IPR005198 EnsemblFungi:CADANIAT00005940
OMA:DMLWVVL Uniprot:C8V8C9
Length = 632
Score = 105 (42.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 38 SDEGERG-MKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTK 96
S+ GE +G D+G+ + DEG+ G +G +EG+ G +G D+ E + DEG++G K
Sbjct: 115 SNRGENSDERGKDDGD---EAEDEGDEGDEG-DEGDEGDEG-DDPEEDEEDEDEGDKGDK 169
Query: 97 GSD 99
G D
Sbjct: 170 GDD 172
Score = 102 (41.0 bits), Expect = 0.00017, P = 0.00017
Identities = 25/66 (37%), Positives = 39/66 (59%)
Query: 28 SDKGEYVMKSSDEG-ERGMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGTK 86
S++GE S + G + G + DEG+ G +G DEG+ G +G ++ E + DEG++G K
Sbjct: 115 SNRGE---NSDERGKDDGDEAEDEGDEGDEG-DEGDEGDEG-DDPEEDEEDEDEGDKGDK 169
Query: 87 GSDEGE 92
G D E
Sbjct: 170 GDDSEE 175
>UNIPROTKB|E2QWR0 [details] [associations]
symbol:SFTPD "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048286 "lung alveolus development"
evidence=IEA] [GO:0043129 "surfactant homeostasis" evidence=IEA]
[GO:0005581 "collagen" evidence=IEA] [GO:0030246 "carbohydrate
binding" evidence=IEA] InterPro:IPR001304 Pfam:PF00059
PROSITE:PS50041 SMART:SM00034 GO:GO:0030246 Gene3D:3.10.100.10
InterPro:IPR016186 InterPro:IPR016187 SUPFAM:SSF56436
PROSITE:PS00615 GO:GO:0048286 GO:GO:0005581 InterPro:IPR008160
Pfam:PF01391 InterPro:IPR018378 GO:GO:0043129 Gene3D:1.20.5.360
InterPro:IPR015097 Pfam:PF09006 GeneTree:ENSGT00700000104102
CTD:6441 KO:K10068 OMA:QNKAAFL EMBL:AAEX03002883 RefSeq:XP_546184.2
ProteinModelPortal:E2QWR0 Ensembl:ENSCAFT00000024963 GeneID:489066
KEGG:cfa:489066 NextBio:20862293 Uniprot:E2QWR0
Length = 375
Score = 102 (41.0 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 38/100 (38%), Positives = 45/100 (45%)
Query: 5 GRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSD----- 59
GR EG RG KG D G G + + G +G GS GE G+KG
Sbjct: 52 GRDGREGPRGEKG-DPGSPGAVG--RAGMPGPAGPVGPKGDNGS-AGEPGLKGDSGPSGP 107
Query: 60 EGERGMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G RGM G EG G +G D G +G G +GE G KG
Sbjct: 108 PGPRGMPGPAGREGPAGKQG-DVGPQGPPGP-QGEAGPKG 145
Score = 95 (38.5 bits), Expect = 0.00047, P = 0.00047
Identities = 38/98 (38%), Positives = 46/98 (46%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG + GE G+KG D G G +G + EG G +G D G +G G +GE
Sbjct: 87 KGDNGSAGEPGLKG-DSGPSGPPGP-RG-MPGPAGREGPAGKQG-DVGPQGPPGP-QGEA 141
Query: 64 GMKGSEEGERGMKGSD--EGERGTKGSD--EGERGTKG 97
G KG E G G +GS G G KG GERG G
Sbjct: 142 GPKG-EVGMPGKQGSAGMTGPTGVKGETGAPGERGAPG 178
>UNIPROTKB|F1NHH4 [details] [associations]
symbol:F1NHH4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005201 "extracellular matrix structural
constituent" evidence=IEA] [GO:0005583 "fibrillar collagen"
evidence=IEA] InterPro:IPR000885 Pfam:PF01410 ProDom:PD002078
PROSITE:PS51461 SMART:SM00038 InterPro:IPR008985 SUPFAM:SSF49899
InterPro:IPR008160 Pfam:PF01391 InterPro:IPR001791 Pfam:PF02210
GO:GO:0005201 GO:GO:0005583 SMART:SM00210
GeneTree:ENSGT00700000104301 OMA:YSYPDRL EMBL:AADN02026658
EMBL:AADN02026659 EMBL:AADN02026660 IPI:IPI00594010
Ensembl:ENSGALT00000011272 Uniprot:F1NHH4
Length = 1836
Score = 110 (43.8 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 37/98 (37%), Positives = 52/98 (53%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSDKGE-YVMKSSDEGERGMKGSDEGERGMKGSD 59
KG KG +GE+G KG+ EG +KG + Y + G G G +GE+G G
Sbjct: 1179 KGDKGEQGLDGEKGEKGT-EG---LKGKEGPPGYPGITGVRGPEGKPGK-QGEKGRPGQ- 1232
Query: 60 EGERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
+G +G +G + GE G G EG +G +G +G RGT G
Sbjct: 1233 KGSKGYQG-QLGETGPPGK-EGPKGNQGP-KGSRGTLG 1267
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 41 GERGMKGSDEGERGMKGSDE--GERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTK 96
GE GMKG D G+ G+ G G+RG G E G+ G G D +G++G +G D GE+G K
Sbjct: 1138 GEPGMKG-DPGQLGVPGEQGLIGQRGEMGLE-GDSGPPGPDGAKGDKGEQGLD-GEKGEK 1194
Query: 97 GSD 99
G++
Sbjct: 1195 GTE 1197
Score = 106 (42.4 bits), Expect = 0.00022, P = 0.00022
Identities = 37/103 (35%), Positives = 53/103 (51%)
Query: 11 GERGMKGSDEGKYVMKGS--DKGEYVM--KSSDEGERGMKGSD--EGERGMKG--SDEGE 62
GE G++G D G G+ DKGE + + ++G G+KG + G G+ G EG+
Sbjct: 1162 GEMGLEG-DSGPPGPDGAKGDKGEQGLDGEKGEKGTEGLKGKEGPPGYPGITGVRGPEGK 1220
Query: 63 RGMKGSEEGERGMKGSDE-----GERGTKGSD--EGERGTKGS 98
G +G E+G G KGS GE G G + +G +G KGS
Sbjct: 1221 PGKQG-EKGRPGQKGSKGYQGQLGETGPPGKEGPKGNQGPKGS 1262
Score = 104 (41.7 bits), Expect = 0.00036, P = 0.00036
Identities = 35/97 (36%), Positives = 46/97 (47%)
Query: 1 MKGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDE 60
M GR +GE G+KG Y G + +GE+G +G D G +G
Sbjct: 1269 MGAPGRMGAQGEPGLKG-----YQGHAGPPGP-IGPPGPKGEKGEQGDDGKVEGPQGPP- 1321
Query: 61 GERGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G+RG G + G+RG G D G G +G D GERG G
Sbjct: 1322 GDRGPVG-DRGDRGEPG-DPGYPGQEGLD-GERGKPG 1355
Score = 102 (41.0 bits), Expect = 0.00058, P = 0.00058
Identities = 37/100 (37%), Positives = 48/100 (48%)
Query: 5 GRSVHEGERGMKGSDEGK-YVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
G +GERG GS K Y + G + ++ +G RG G G G+ G+D GER
Sbjct: 694 GHPGDQGERGPAGSPGAKGYPGRQGLPGP-IGEAGPKGSRGYIGLP-GLFGLPGAD-GER 750
Query: 64 GMKG--SEEGERGMKG--SDEGERGTKGSD--EGERGTKG 97
G+ G + G+ G G D GERG G D GE G G
Sbjct: 751 GIPGVPGKRGKMGRPGFPGDFGERGPPGIDGNPGELGAPG 790
>MGI|MGI:2653243 [details] [associations]
symbol:Col23a1 "collagen, type XXIII, alpha 1" species:10090
"Mus musculus" [GO:0005581 "collagen" evidence=IEA] [GO:0005615
"extracellular space" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008201 "heparin binding" evidence=ISO]
[GO:0009986 "cell surface" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0070207 "protein homotrimerization" evidence=ISO]
MGI:MGI:2653243 GO:GO:0016021 GO:GO:0005886 GO:GO:0005615
GO:GO:0009986 GO:GO:0008201 HOGENOM:HOG000085653 GO:GO:0005581
InterPro:IPR008160 Pfam:PF01391 GO:GO:0070207 EMBL:AL662843
HOVERGEN:HBG004933 GeneTree:ENSGT00530000063274 CTD:91522
eggNOG:NOG320189 OMA:IPGRKGV OrthoDB:EOG4N5VZ2 EMBL:AF410792
EMBL:AL645907 IPI:IPI00170217 RefSeq:NP_700442.2 UniGene:Mm.154093
ProteinModelPortal:Q8K4G2 SMR:Q8K4G2 PhosphoSite:Q8K4G2
PRIDE:Q8K4G2 Ensembl:ENSMUST00000102765 GeneID:237759
KEGG:mmu:237759 UCSC:uc007itv.2 InParanoid:Q8K4G2
Reactome:REACT_131142 NextBio:383470 Bgee:Q8K4G2 CleanEx:MM_COL23A1
Genevestigator:Q8K4G2 GermOnline:ENSMUSG00000063564 Uniprot:Q8K4G2
Length = 532
Score = 104 (41.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 36/98 (36%), Positives = 49/98 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG +GE+G G + G + + G ++ G +G KG GE G+ G G R
Sbjct: 424 KGLDGAKGEKGTSG-ERGPHGLPGPVGPPGLIGLP--GTKGEKGRP-GEPGLDGFP-GPR 478
Query: 64 GMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G KG SE GE+G +G G +G KG +GE G G D
Sbjct: 479 GEKGDRSERGEKGERGVP-GRKGVKGQ-KGEPGPPGLD 514
>RGD|727898 [details] [associations]
symbol:Col23a1 "collagen, type XXIII, alpha 1" species:10116
"Rattus norvegicus" [GO:0005581 "collagen" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0008201 "heparin binding" evidence=IPI]
[GO:0009986 "cell surface" evidence=IDA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0070207 "protein homotrimerization"
evidence=IDA] RGD:727898 GO:GO:0016021 GO:GO:0005886 GO:GO:0005615
GO:GO:0042803 GO:GO:0009986 GO:GO:0008201 HOGENOM:HOG000085653
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 GO:GO:0070207
HOVERGEN:HBG004933 CTD:91522 eggNOG:NOG320189 EMBL:AY158896
IPI:IPI00331769 RefSeq:NP_853667.1 RefSeq:XP_003752371.1
UniGene:Rn.206241 GeneID:100910384 GeneID:353303 KEGG:rno:100910384
KEGG:rno:353303 UCSC:RGD:727898 InParanoid:Q810Y4 NextBio:672659
ArrayExpress:Q810Y4 Genevestigator:Q810Y4
GermOnline:ENSRNOG00000003349 Uniprot:Q810Y4
Length = 532
Score = 104 (41.7 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 36/98 (36%), Positives = 49/98 (50%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
KG +GE+G G + G + + G ++ G +G KG GE G+ G G R
Sbjct: 424 KGLDGAKGEKGASG-ERGPHGLPGPVGPPGLIGLP--GTKGEKGRP-GEPGLDGFP-GPR 478
Query: 64 GMKG--SEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G KG SE GE+G +G G +G KG +GE G G D
Sbjct: 479 GEKGDRSERGEKGERGVP-GRKGVKGQ-KGEPGPPGLD 514
>WB|WBGene00016173 [details] [associations]
symbol:fust-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000504 InterPro:IPR001876 InterPro:IPR012677
Pfam:PF00641 PROSITE:PS01358 PROSITE:PS50102 PROSITE:PS50199
SMART:SM00360 SMART:SM00547 GO:GO:0000166 GO:GO:0008270
Gene3D:3.30.70.330 GO:GO:0000003 GO:GO:0003676 GO:GO:0005622
eggNOG:NOG240581 GeneTree:ENSGT00530000063105 EMBL:FO080695
KO:K14651 PIR:T15667 RefSeq:NP_495483.1 ProteinModelPortal:Q18265
SMR:Q18265 STRING:Q18265 PaxDb:Q18265 EnsemblMetazoa:C27H5.3.1
EnsemblMetazoa:C27H5.3.2 GeneID:174175 KEGG:cel:CELE_C27H5.3
UCSC:C27H5.3.1 CTD:174175 WormBase:C27H5.3 InParanoid:Q18265
OMA:YVTIRGQ NextBio:882851 Uniprot:Q18265
Length = 448
Score = 103 (41.3 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 34/95 (35%), Positives = 41/95 (43%)
Query: 3 GKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGE 62
G GR G RG G D G Y G G G G +G D G G +G D G
Sbjct: 305 GGGRGGPMGGRGGFGGDRGGY---GGGGGRGGFDGGRGGGGGFRGGDRG--GFRGGDRG- 358
Query: 63 RGMKGSEEGERGMKGSDEGERGTKGSDEGERGTKG 97
G +G + G G +G D G G +G G RG +G
Sbjct: 359 -GFRGGDRG--GFRGGDRG--GDRG---GFRGGRG 385
Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
Identities = 32/96 (33%), Positives = 42/96 (43%)
Query: 4 KGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGER 63
K R+ GERG +G G +G G + G+RG G G G G G
Sbjct: 286 KFRADAGGERGGRGGRGGFGGGRGGPMGG---RGGFGGDRGGYGGGGGRGGFDGGRGGGG 342
Query: 64 GMKGSEEGERGMKGSDEGERGTKGSDEGERGTKGSD 99
G +G + G G +G D G G +G D G G +G D
Sbjct: 343 GFRGGDRG--GFRGGDRG--GFRGGDRG--GFRGGD 372
Score = 94 (38.1 bits), Expect = 0.00077, P = 0.00077
Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 44 GMKGSDEGERGMKGSDEGERGMKGSEEGERGMKGSDEGERGT-KGSDEGER--GTKGSD 99
G +G G RG G D G G +G +G RG G D G RG +G +GER G++ D
Sbjct: 89 GGRGGFGGSRGGGGYDGGRGGSRGGYDGGRGGYGGDRGGRGGGRGGYDGERRGGSRWDD 147
Score = 93 (37.8 bits), Expect = 0.00099, P = 0.00099
Identities = 28/90 (31%), Positives = 40/90 (44%)
Query: 10 EGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGMKGSDEGERGMKGSE 69
+G G G + +G +G + G RG G D G G +G +G RG G +
Sbjct: 71 QGSGGQSGGSDPYGQSRGGGRGGF------GGSRGGGGYDGGRGGSRGGYDGGRGGYGGD 124
Query: 70 EGERGM-KGSDEGER-GTKGSDEGERGTKG 97
G RG +G +GER G D+G +G
Sbjct: 125 RGGRGGGRGGYDGERRGGSRWDDGNSDRQG 154
Score = 93 (37.8 bits), Expect = 0.00099, P = 0.00099
Identities = 33/94 (35%), Positives = 42/94 (44%)
Query: 2 KGKGRSVHEGERGMKGSDEGKYVMKGSDKGEYVMKSSDEGERGMKGSDEGERGM-KGSDE 60
+G GR G RG G D G+ G +G Y +G RG G D G RG +G +
Sbjct: 87 RGGGRGGFGGSRGGGGYDGGR----GGSRGGY------DGGRGGYGGDRGGRGGGRGGYD 136
Query: 61 GER-GMKGSEEGERGMKGSDEGERGTKGSDEGER 93
GER G ++G +G G RG D G R
Sbjct: 137 GERRGGSRWDDGNSDRQGGPPGGRGGY-QDRGPR 169
>ZFIN|ZDB-GENE-030131-7145 [details] [associations]
symbol:col17a1b "collagen, type XVII, alpha 1b"
species:7955 "Danio rerio" [GO:0048925 "lateral line system
development" evidence=IMP] ZFIN:ZDB-GENE-030131-7145
InterPro:IPR008160 Pfam:PF01391 GeneTree:ENSGT00700000104250
EMBL:AL929005 IPI:IPI00499961 Ensembl:ENSDART00000021053
ArrayExpress:F1R7W0 Bgee:F1R7W0 GO:GO:0048925 Uniprot:F1R7W0
Length = 1542
Score = 109 (43.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 41/109 (37%), Positives = 51/109 (46%)
Query: 5 GRSVHEGERGMKGS--DEGKYVMKGSD-----KGEYVMKSSDE-GERGMKGSDE--GERG 54
G S +G++G KGS + G +G D +GE + E GERG G G G
Sbjct: 666 GHSGRDGQKGEKGSAGEHGAEGFRGRDGQPGPRGEPGPPGAGEKGERGSPGLPGLIGPPG 725
Query: 55 MKGSD--EGERGMKG--SEEGERGMKGSDEGERGTKG--SDEGERGTKG 97
KGS GE+G +G E G G KG D G G G D G+RG G
Sbjct: 726 AKGSSGLHGEQGPQGFRGEPGPAGPKG-DRGLPGLPGIKGDHGDRGENG 773
>UNIPROTKB|F6R9Y9 [details] [associations]
symbol:COL9A3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008585 "female gonad development" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0005594
"collagen type IX" evidence=IEA] GO:GO:0008585 GO:GO:0008584
InterPro:IPR008160 Pfam:PF01391 GO:GO:0005594
GeneTree:ENSGT00700000104194 EMBL:DAAA02036246 EMBL:DAAA02036242
EMBL:DAAA02036243 EMBL:DAAA02036244 EMBL:DAAA02036245
IPI:IPI00906354 Ensembl:ENSBTAT00000020699 OMA:CGEMINE
Uniprot:F6R9Y9
Length = 689
Score = 105 (42.0 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 41/104 (39%), Positives = 50/104 (48%)
Query: 2 KG-KGRSVHEGERGMKGSDEGKYVMKGSD--KGEYVMKSSDEGERGMKGSD--EGERGMK 56
KG G S GE GM G D G+ + G D KGE + GE+G G G G K
Sbjct: 292 KGIPGMSGPSGEPGMPGKD-GQDGVPGLDGEKGE-AGRHGAPGEKGPNGLPGLPGRAGSK 349
Query: 57 GSDEGERGMKGSEEGERGMKGSD--EGERGTKGSDEGERGTKGS 98
G ++GE G G E GE G G G+ G G + GE G +GS
Sbjct: 350 G-EKGELGRPG-ELGEAGPSGEPGVPGDVGMPG-ERGEAGHRGS 390
WARNING: HSPs involving 181 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.299 0.129 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 102 102 0.00091 102 3 11 24 0.37 32
29 0.48 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 431
No. of states in DFA: 280 (30 KB)
Total size of DFA: 63 KB (2062 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 12.47u 0.08s 12.55t Elapsed: 00:00:14
Total cpu time: 12.56u 0.08s 12.64t Elapsed: 00:00:18
Start: Thu Aug 15 13:13:18 2013 End: Thu Aug 15 13:13:36 2013
WARNINGS ISSUED: 2