BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12053
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VUI3|EMAL_DROME Echinoderm microtubule-associated protein-like CG42247
OS=Drosophila melanogaster GN=DCX-EMAP PE=2 SV=3
Length = 1076
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/127 (60%), Positives = 95/127 (74%), Gaps = 3/127 (2%)
Query: 29 SRPPSPSGGDNASETSSVMPPPPPQQTQ-RPK--SRAESKYDNLSYWRARKVTFFKNGDP 85
SR SP DN SE S P P +++ RP+ S A S+Y+NLSYW+AR+V F++NGDP
Sbjct: 122 SRAISPGYLDNMSENSEQPPVVPLVRSKSRPEISSAAASRYNNLSYWKARRVVFYRNGDP 181
Query: 86 YFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILTLDELEDNASYVV 145
+FPGVE R++PGRD+ SL+ L DK+S +MDLPRGARYVFSMDG R LDELED A YVV
Sbjct: 182 FFPGVELRYRPGRDVTSLDNLLDKISPKMDLPRGARYVFSMDGDRKYHLDELEDGAFYVV 241
Query: 146 SSYKTFK 152
SS+K FK
Sbjct: 242 SSFKAFK 248
>sp|Q95QC4|DCLK_CAEEL Serine/threonine-protein kinase zyg-8 OS=Caenorhabditis elegans
GN=zyg-8 PE=1 SV=1
Length = 802
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 23/145 (15%)
Query: 28 GSRPPSPSGGDNASETSSVMPPPPP--------------QQTQRPKSRAESKYDNLSYWR 73
GS P S + AS TSSV + QR S Y +L +
Sbjct: 152 GSMPNSGTNTAEASMTSSVCAMETEGTNGDELAESRDMVSEMQRRCRIGPSGYPHL--LK 209
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKL--SVRMD---LPRGARYVFSMDG 128
A+++ F++NGD YF G++Y + R + S++ L + L +V D LP G R++F++DG
Sbjct: 210 AKRLRFYRNGDQYFKGIQYALQSDR-VKSMQPLMEDLMKTVICDSTALPHGIRHIFTIDG 268
Query: 129 V-RILTLDELEDNASYVVSSYKTFK 152
RI ++D+ ED YV SS FK
Sbjct: 269 AQRITSVDQFEDGGGYVCSSTDAFK 293
>sp|O43602|DCX_HUMAN Neuronal migration protein doublecortin OS=Homo sapiens GN=DCX PE=1
SV=3
Length = 441
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEA----LQDKLSVRMDLPRGARYVFSMDG 128
+A+KV F++NGD YF G+ Y R S +A L LS ++LP+G RY++++DG
Sbjct: 132 KAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYTIDG 190
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R I ++DELE+ SYV SS FK
Sbjct: 191 SRKIGSMDELEEGESYVCSSDNFFK 215
>sp|O88809|DCX_MOUSE Neuronal migration protein doublecortin OS=Mus musculus GN=Dcx PE=1
SV=1
Length = 366
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEA----LQDKLSVRMDLPRGARYVFSMDG 128
+A+KV F++NGD YF G+ Y R S +A L LS ++LP+G RY++++DG
Sbjct: 51 KAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLPQGVRYIYTIDG 109
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R I ++DELE+ SYV SS FK
Sbjct: 110 SRKIGSMDELEEGESYVCSSDNFFK 134
>sp|O15075|DCLK1_HUMAN Serine/threonine-protein kinase DCLK1 OS=Homo sapiens GN=DCLK1 PE=1
SV=2
Length = 740
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEA----LQDKLSVRMDLPRGARYVFSMDG 128
+A+KV F++NGD YF G+ Y P R S EA L LS ++LP+G R ++++DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 129 V-RILTLDELEDNASYVVSSYKTFK 152
+ +I +LD+L + SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>sp|Q9JLM8|DCLK1_MOUSE Serine/threonine-protein kinase DCLK1 OS=Mus musculus GN=Dclk1 PE=1
SV=1
Length = 756
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEA----LQDKLSVRMDLPRGARYVFSMDG 128
+A+KV F++NGD YF G+ Y P R S EA L LS ++LP+G R ++++DG
Sbjct: 55 KAKKVRFYRNGDRYFKGIVYAISPDR-FRSFEALLADLTRTLSDNVNLPQGVRTIYTIDG 113
Query: 129 V-RILTLDELEDNASYVVSSYKTFK 152
+ +I +LD+L + SYV S + FK
Sbjct: 114 LKKISSLDQLVEGESYVCGSIEPFK 138
>sp|Q9ESI7|DCX_RAT Neuronal migration protein doublecortin OS=Rattus norvegicus GN=Dcx
PE=1 SV=2
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEA----LQDKLSVRMDLPRGARYVFSMDG 128
+A+KV F++NGD YF G+ Y R S +A L LS ++L +G RY++++DG
Sbjct: 51 KAKKVRFYRNGDRYFKGIVYAVSSDR-FRSFDALLADLTRSLSDNINLLQGVRYIYTIDG 109
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R I ++DELE+ SYV SS FK
Sbjct: 110 SRKIGSMDELEEGESYVCSSDNFFK 134
>sp|Q8MJ04|RP1_CANFA Oxygen-regulated protein 1 OS=Canis familiaris GN=RP1 PE=2 SV=1
Length = 2141
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A+K++F+K+GDP F GV+ P R + +AL D LS ++ LP G R + + G +T
Sbjct: 33 AKKISFYKSGDPQFGGVKVVVNP-RSFKTFDALLDNLSRKVPLPFGVRNISTPRGRHSIT 91
Query: 134 -LDELEDNASYVVS 146
L+ELED ASY+ S
Sbjct: 92 RLEELEDGASYLCS 105
>sp|D2I3C6|DCLK2_AILME Serine/threonine-protein kinase DCLK2 OS=Ailuropoda melanoleuca
GN=DCLK2 PE=3 SV=1
Length = 784
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGR----DIPSLEALQDKLSVRMDLPRGARYVFSMDG 128
+A+K F++NGD YF G+ + R D +E L LS ++LP+G R ++++DG
Sbjct: 70 KAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLME-LTRSLSDNVNLPQGVRTIYTIDG 128
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R + +LDEL + SYV +S + F+
Sbjct: 129 SRKVTSLDELLEGESYVCASNEPFR 153
>sp|P56716|RP1_MOUSE Oxygen-regulated protein 1 OS=Mus musculus GN=Rp1 PE=1 SV=2
Length = 2095
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 3/87 (3%)
Query: 65 KYDNLSY-WRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYV 123
++ N+++ A++++F+K+GDP F GV P R + +AL D LS ++ LP G R +
Sbjct: 24 RHSNITHPVVAKRISFYKSGDPQFGGVRVVVNP-RSFKTFDALLDSLSRKVPLPFGVRNI 82
Query: 124 FSMDGVRILT-LDELEDNASYVVSSYK 149
+ G +T L+ELED SYV S K
Sbjct: 83 STPRGRHSITRLEELEDGKSYVCSHNK 109
>sp|Q8N568|DCLK2_HUMAN Serine/threonine-protein kinase DCLK2 OS=Homo sapiens GN=DCLK2 PE=2
SV=4
Length = 766
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGR----DIPSLEALQDKLSVRMDLPRGARYVFSMDG 128
+A+K F++NGD YF G+ + R D +E L LS ++LP+G R ++++DG
Sbjct: 70 KAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLIE-LTRSLSDNVNLPQGVRTIYTIDG 128
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R + +LDEL + SYV +S + F+
Sbjct: 129 SRKVTSLDELLEGESYVCASNEPFR 153
>sp|Q5MPA9|DCLK2_RAT Serine/threonine-protein kinase DCLK2 OS=Rattus norvegicus GN=Dclk2
PE=1 SV=2
Length = 767
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGR----DIPSLEALQDKLSVRMDLPRGARYVFSMDG 128
+A+K F++NGD YF G+ + R D +E L LS ++LP+G R ++++DG
Sbjct: 70 KAKKARFYRNGDRYFKGLVFAISSDRFRSFDALLIE-LTRSLSDNVNLPQGVRTIYTVDG 128
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R + +LDEL + SYV +S + F+
Sbjct: 129 SRKVTSLDELLEGESYVCASNEPFR 153
>sp|Q6PGN3|DCLK2_MOUSE Serine/threonine-protein kinase DCLK2 OS=Mus musculus GN=Dclk2 PE=1
SV=1
Length = 756
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGR----DIPSLEALQDKLSVRMDLPRGARYVFSMDG 128
+A+K F++NGD YF G+ + R D +E L LS ++LP+G R ++++DG
Sbjct: 70 KAKKARFYRNGDRYFKGLVFAISNDRFRSFDALLIE-LTRSLSDNVNLPQGVRTIYTIDG 128
Query: 129 VR-ILTLDELEDNASYVVSSYKTFK 152
R + +LDEL + SYV +S + F+
Sbjct: 129 SRKVTSLDELLEGESYVCASNEPFR 153
>sp|P56715|RP1_HUMAN Oxygen-regulated protein 1 OS=Homo sapiens GN=RP1 PE=1 SV=1
Length = 2156
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A++++F+K+GDP F GV P R S +AL D LS ++ LP G R + + G +T
Sbjct: 35 AKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGVRNISTPRGRHSIT 93
Query: 134 -LDELEDNASYVVS 146
L+ELED SY+ S
Sbjct: 94 RLEELEDGESYLCS 107
>sp|Q8MJ06|RP1_PAPHA Oxygen-regulated protein 1 OS=Papio hamadryas GN=RP1 PE=2 SV=1
Length = 2152
Score = 53.5 bits (127), Expect = 7e-07, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A++++F+K+GDP F GV P R S +AL D LS ++ LP G R + + G +T
Sbjct: 35 AKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGVRNISTPRGRHSIT 93
Query: 134 -LDELEDNASYVVS 146
L+ELED SY+ S
Sbjct: 94 RLEELEDGESYLCS 107
>sp|Q8MJ05|RP1_BOVIN Oxygen-regulated protein 1 OS=Bos taurus GN=RP1 PE=2 SV=1
Length = 2105
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A++++F+K+GDP F GV P R + +AL D LS ++ LP G R + + G +T
Sbjct: 35 AKRISFYKSGDPQFGGVRVVLNP-RSFKTFDALLDNLSGKVPLPFGVRNISTPRGRHSIT 93
Query: 134 -LDELEDNASYVVS 146
L+ELED SY+ S
Sbjct: 94 RLEELEDGQSYLCS 107
>sp|Q8MJ03|RP1_SAIBB Oxygen-regulated protein 1 OS=Saimiri boliviensis boliviensis
GN=RP1 PE=2 SV=1
Length = 2149
Score = 53.1 bits (126), Expect = 8e-07, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A++++F+K+GDP F GV P R S +AL D LS ++ LP G R + + G +T
Sbjct: 35 AKRISFYKSGDPQFGGVRVVVNP-RSFKSFDALLDNLSRKVPLPFGVRNISTPRGRHSIT 93
Query: 134 -LDELEDNASYVVS 146
L+ELED SY+ S
Sbjct: 94 RLEELEDGESYLCS 107
>sp|Q8CGM2|RP1L1_MOUSE Retinitis pigmentosa 1-like 1 protein OS=Mus musculus GN=Rp1l1 PE=1
SV=1
Length = 1859
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A+K+TF K GDP F GV R + +L D+LS RM L G R V + G+ L+
Sbjct: 41 AKKITFLKRGDPQFAGVRLAVHQ-RTFKTFSSLMDELSQRMPLSFGVRSVTTPRGLHGLS 99
Query: 134 -LDELEDNASYVVSSYKTFKVRFYP 157
L++L+D Y+ S K K P
Sbjct: 100 ALEQLQDGGCYLCSDRKPPKTSREP 124
>sp|B3NKK1|DCLK_DROER Serine/threonine-protein kinase GG21441 OS=Drosophila erecta
GN=GG21441 PE=3 SV=1
Length = 745
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 14/116 (12%)
Query: 38 DNASETSSVMPPPPPQQTQR--PKSRAESKYDNLSYWRARKVTFFKNGDPYFPGVEYRFK 95
D+AS ++ + P ++ P SR ++ +A ++ F++NGD ++PG+
Sbjct: 127 DSASGSTCLAIASPVDHIKKRIPNSRTPTR-------KALRIKFYRNGDRFYPGITIPVS 179
Query: 96 PGRDIPSLEALQDKLSVRMD----LPRGARYVFSMDGVRILTLDELEDNASYVVSS 147
R S E L + L+ ++ +P R +++M G +I +LDELED SYV S
Sbjct: 180 NER-YRSFERLYEDLTRLLEENVKIPGAVRTIYNMCGKKITSLDELEDGQSYVCSC 234
>sp|B4IMC3|DCLK_DROSE Serine/threonine-protein kinase GM11705 OS=Drosophila sechellia
GN=GM11705 PE=3 SV=1
Length = 744
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 30 RPPSPSGGDNASETSSVMPPPPPQQTQRPKSRAESKYDNLSYWRARKVTFFKNGDPYFPG 89
P S SG S ++ P + + P SR ++ +A ++ F++NGD ++PG
Sbjct: 120 EPNSASG----SACLTIAPTADHIKKRIPSSRTPTR-------KALRIKFYRNGDRFYPG 168
Query: 90 VEY-----RFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILTLDELEDNASYV 144
+ R++ + E L L + +P R +++M G +I +LDELED SYV
Sbjct: 169 ITIPVSNERYRSFERL--FEDLTRLLEENVKIPGAVRTIYNMCGKKITSLDELEDGQSYV 226
Query: 145 VSS 147
S
Sbjct: 227 CSC 229
>sp|B4NSS9|DCLK_DROSI Serine/threonine-protein kinase GD17699 OS=Drosophila simulans
GN=GD17699 PE=3 SV=1
Length = 743
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 18/123 (14%)
Query: 30 RPPSPSGGDNASETSSVMPPPPPQQTQRPKSRAESKYDNLSYWRARKVTFFKNGDPYFPG 89
P S SG S ++ P + + P SR ++ +A ++ F++NGD ++PG
Sbjct: 120 EPNSASG----SACLTIAPTADHIKKRIPSSRTPTR-------KALRIKFYRNGDRFYPG 168
Query: 90 VEY-----RFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILTLDELEDNASYV 144
+ R++ + E L L + +P R +++M G +I +LDELED SYV
Sbjct: 169 ITIPVSNERYRSFERL--FEDLTRLLEENVKIPGAVRTIYNMCGKKITSLDELEDGQSYV 226
Query: 145 VSS 147
S
Sbjct: 227 CSC 229
>sp|B4IT27|DCLK_DROYA Serine/threonine-protein kinase GE16371 OS=Drosophila yakuba
GN=GE16371 PE=3 SV=2
Length = 750
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 73 RARKVTFFKNGDPYFPGVEY-----RFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMD 127
+A ++ F++NGD ++PGV R++ + E L L + +P R +++M
Sbjct: 157 KALRIKFYRNGDRFYPGVTIPVSNERYRSFERL--FEDLTRLLEENVKIPGAVRTIYNMC 214
Query: 128 GVRILTLDELEDNASYVVSS 147
G +I +LDELED SYV S
Sbjct: 215 GKKITSLDELEDGQSYVCSC 234
>sp|A8MYV0|DCD2C_HUMAN Doublecortin domain-containing protein 2C OS=Homo sapiens GN=DCDC2C
PE=4 SV=3
Length = 355
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFS-MDGVRIL 132
A+ + ++NGDP++ G ++ R + EAL ++L+ ++D+P G R +F+ G R+L
Sbjct: 15 AKTIVVYRNGDPFYVGKKFVLS-RRRAATFEALLEQLTEQVDVPFGVRRLFTPTRGHRVL 73
Query: 133 TLDELEDNASYVVSSYKTFK 152
LD L+ YV + + FK
Sbjct: 74 GLDALQAGGKYVAAGRERFK 93
>sp|B5DK35|DCLK_DROPS Serine/threonine-protein kinase GA29083 OS=Drosophila pseudoobscura
pseudoobscura GN=GA29083 PE=3 SV=1
Length = 755
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 27/168 (16%)
Query: 2 SKNPKTSKAVNTRPRPNTVLTGGGYWGSRPPSPSGGDNASETSSVMPPPPPQQTQRPKSR 61
S N + K ++ N LTG G G S SG + + + P T S
Sbjct: 70 SSNSEPEKDLDELRDLNGSLTGSGSVGKSNGSLSGASSTTSAPAGTSTPGSANTNGSASG 129
Query: 62 AESKYDNLSYW------------------RARKVTFFKNGDPYFPGVEYRFKPGRDIPSL 103
A S LS +A ++ F++NGD ++PG+ R S
Sbjct: 130 AAS----LSVVSATAHLKKRITSSRTPTRKAHRIKFYRNGDRFYPGITIPVSNER-YRSF 184
Query: 104 EALQDKLSVRMD----LPRGARYVFSMDGVRILTLDELEDNASYVVSS 147
E+L + L+ ++ +P R ++ M G +I L+ELED SYV S
Sbjct: 185 ESLYEDLTRLLEENVKIPGAVRTIYDMVGKKITALEELEDGQSYVCSC 232
>sp|B4GXC2|DCLK_DROPE Serine/threonine-protein kinase GL21140 OS=Drosophila persimilis
GN=GL21140 PE=3 SV=1
Length = 755
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 73 RARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMD----LPRGARYVFSMDG 128
+A ++ F++NGD ++PG+ R S E+L + L+ ++ +P R ++ M G
Sbjct: 155 KAHRIKFYRNGDRFYPGITIPVSNER-YRSFESLYEDLTRLLEENVKIPGAVRTIYDMVG 213
Query: 129 VRILTLDELEDNASYVVSS 147
+I L+ELED SYV S
Sbjct: 214 KKITALEELEDGQSYVCSC 232
>sp|Q7PLI7|DCLK_DROME Serine/threonine-protein kinase CG17528 OS=Drosophila melanogaster
GN=CG17528 PE=1 SV=1
Length = 748
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 7/80 (8%)
Query: 73 RARKVTFFKNGDPYFPGVEY-----RFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMD 127
+A ++ F++NGD ++PG+ R++ + E L L + +P R ++++
Sbjct: 156 KALRIKFYRNGDRFYPGITIPVSNERYRSFERL--FEDLTRLLEENVKIPGAVRTIYNLC 213
Query: 128 GVRILTLDELEDNASYVVSS 147
G +I +LDELED SYV S
Sbjct: 214 GKKITSLDELEDGQSYVCSC 233
>sp|A2VCK2|DCD2B_HUMAN Doublecortin domain-containing protein 2B OS=Homo sapiens GN=DCDC2B
PE=2 SV=1
Length = 349
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFS-MDGVRIL 132
A++V ++NGDP+FPG + R P++EA +++ + P R +++ G +
Sbjct: 8 AKRVVVYRNGDPFFPGSQLVVT-QRRFPTMEAFLCEVTSAVQAPLAVRALYTPCHGHPVT 66
Query: 133 TLDELEDNASYVVSSYKTF-KVRFYPF 158
L +L++ YV + ++ F K+ + P
Sbjct: 67 NLADLKNRGQYVAAGFERFHKLHYLPH 93
>sp|Q8IWN7|RP1L1_HUMAN Retinitis pigmentosa 1-like 1 protein OS=Homo sapiens GN=RP1L1 PE=1
SV=4
Length = 2480
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
A+K+TF K GDP F GV R + AL D+LS R+ L G R V + G+ L+
Sbjct: 33 AKKITFLKRGDPRFAGVRLAVHQ-RAFKTFSALMDELSQRVPLSFGVRSVTTPRGLHSLS 91
Query: 134 -LDELEDNASYVVSSYK 149
L++LED Y+ S K
Sbjct: 92 ALEQLEDGGCYLCSDKK 108
>sp|Q9D1B8|DCD2C_MOUSE Doublecortin domain-containing protein 2C OS=Mus musculus GN=Dcdc2c
PE=2 SV=2
Length = 347
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFS-MDGVRIL 132
A+ + ++NGD ++ G ++ F R + + EAL ++L+ ++++P G R +++ G +L
Sbjct: 15 AKTILVYRNGDQFYVGRKFVFS-RRRVANFEALLEQLTEQVEVPFGVRRLYTPTRGHPVL 73
Query: 133 TLDELEDNASYVVSSYKTFK 152
LD L+ YV + + FK
Sbjct: 74 GLDALQTGGKYVAAGRERFK 93
Score = 30.4 bits (67), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 74 ARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRILT 133
+R + F NG + P ++ P + ++ + ++ G R +F+MDG +
Sbjct: 135 SRYINVFTNGRLFIPPIKV-IIPKFSLSDWNSVLAMIGEKVFPLGGVRKLFTMDGHLLDD 193
Query: 134 LDELEDNASYVVSSYKTFK 152
L+DN YV + +TFK
Sbjct: 194 SKNLQDNYFYVAAGLETFK 212
>sp|Q5DU00|DCDC2_MOUSE Doublecortin domain-containing protein 2 OS=Mus musculus GN=Dcdc2
PE=2 SV=2
Length = 475
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 64 SKYDNLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGA-RY 122
S+ +LS + V ++NGDP+F G + + S + +++ + P GA R
Sbjct: 6 SRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHE-KKVSSFDVFLKEVTGGVQAPFGAVRN 64
Query: 123 VFS-MDGVRILTLDELEDNASYVVSSYKTFKVRFY 156
+++ G RI LD++E +YV + FK Y
Sbjct: 65 IYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNY 99
>sp|D3ZR10|DCDC2_RAT Doublecortin domain-containing protein 2 OS=Rattus norvegicus
GN=Dcdc2 PE=2 SV=1
Length = 475
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 68 NLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGA-RYVFS- 125
+LS + V ++NGDP+F G + + S + +++ + P GA R +++
Sbjct: 10 HLSQPVVKSVLVYRNGDPFFAGRRVVIHE-KKVSSFDIFLKEVTGGVQAPFGAVRNIYTP 68
Query: 126 MDGVRILTLDELEDNASYVVSSYKTFKVRFY 156
G RI LD++E +YV + FK Y
Sbjct: 69 RTGHRIRKLDQIESGGNYVAGGQEAFKKLNY 99
>sp|B2XWJ7|NDHH_FAGEA NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Fagopyrum esculentum subsp. ancestrale GN=ndhH PE=3
SV=1
Length = 393
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 66 YDNLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFS 125
Y+NL R KV DP + EYRF R P+ E Q +L VR++ P+G +F
Sbjct: 287 YENLEIRRCNKVR-----DPEWNNFEYRFISKRPSPTFELSQQELYVRVEAPKGELGIFL 341
Query: 126 M 126
+
Sbjct: 342 I 342
>sp|Q9UHG0|DCDC2_HUMAN Doublecortin domain-containing protein 2 OS=Homo sapiens GN=DCDC2
PE=1 SV=2
Length = 476
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 60 SRAESKYDNLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRG 119
S + ++ +LS + V ++NGDP++ G + + S E +++ + P G
Sbjct: 2 SGSSARSSHLSQPVVKSVLVYRNGDPFYAGRRVVIHE-KKVSSFEVFLKEVTGGVQAPFG 60
Query: 120 A-RYVFS-MDGVRILTLDELEDNASYVVSSYKTFK 152
A R +++ G RI LD+++ +YV + FK
Sbjct: 61 AVRNIYTPRTGHRIRKLDQIQSGGNYVAGGQEAFK 95
>sp|A5DTX3|SEC31_LODEL Protein transport protein SEC31 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=SEC31 PE=3 SV=1
Length = 953
Score = 34.7 bits (78), Expect = 0.29, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 28/73 (38%), Gaps = 8/73 (10%)
Query: 5 PKTSKAVNTRP--------RPNTVLTGGGYWGSRPPSPSGGDNASETSSVMPPPPPQQTQ 56
P TS A T P +PN Y S P PS AS + + PPPP Q
Sbjct: 881 PSTSSAYPTAPVAKSNPYAKPNPYTPNNIYKTSPVPQPSVAPQASFSGTAPPPPPAVQKA 940
Query: 57 RPKSRAESKYDNL 69
K R E N+
Sbjct: 941 NSKERMERLARNI 953
>sp|Q550F6|DCX_DICDI Protein doublecortin OS=Dictyostelium discoideum GN=dcx PE=1 SV=1
Length = 308
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 6/113 (5%)
Query: 43 TSSVMPPPPPQQTQRPKSRAESKYDNLSYW--RARKVTFFKNGDPYFPGVEYRFKPGRDI 100
SS P P + +S S D S +A+ + F+NGD Y G +
Sbjct: 161 VSSAQSPKKPVVSAYKESAVHS-IDKFSVQTEKAKVIMCFRNGDRYHSGERVTVHSTK-F 218
Query: 101 PSLEALQDKLSVRMDLPRG--ARYVFSMDGVRILTLDELEDNASYVVSSYKTF 151
+ + L+++LS ++ LP G + + G + T++E+ D YV + +T
Sbjct: 219 KTYDQLKEQLSKQVKLPTGPVRKLYLASSGKLVKTMEEIIDGEYYVCAGGETL 271
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 33.1 bits (74), Expect = 0.85, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 21/51 (41%)
Query: 3 KNPKTSKAVNTRPRPNTVLTGGGYWGSRPPSPSGGDNASETSSVMPPPPPQ 53
K P K RP+P + G S PSG +A E SS P P Q
Sbjct: 138 KAPTARKTTTRRPKPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQ 188
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 33.1 bits (74), Expect = 0.86, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 99 DIPSLEALQDKLSVRMDLPRGARYVFSMD 127
DIP L Q++L +D+PR RY+F +D
Sbjct: 1040 DIPVLSGSQNELHYIVDVPRSGRYIFVID 1068
>sp|B0Z599|NDHH_OENGL NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Oenothera glazioviana GN=ndhH PE=3 SV=1
Length = 393
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 78 TFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSM 126
F + DP + G EYRF + P+ E + +L VR++ P+G +F +
Sbjct: 294 CFDREKDPEWDGFEYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342
>sp|Q9MTH6|NDHH_OENEH NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Oenothera elata subsp. hookeri GN=ndhH PE=3 SV=1
Length = 393
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 78 TFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSM 126
F + DP + G EYRF + P+ E + +L VR++ P+G +F +
Sbjct: 294 CFDREKDPEWDGFEYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342
>sp|B0Z515|NDHH_OENBI NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Oenothera biennis GN=ndhH PE=3 SV=1
Length = 393
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 78 TFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSM 126
F + DP + G EYRF + P+ E + +L VR++ P+G +F +
Sbjct: 294 CFDREKDPEWDGFEYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342
>sp|B4PRE2|DGKH_DROYA Diacylglycerol kinase eta OS=Drosophila yakuba GN=GE24946 PE=3 SV=2
Length = 1917
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 12/54 (22%)
Query: 7 TSKAVNTRPRPNTVLT---------GGGYWGS---RPPSPSGGDNASETSSVMP 48
T + +N+ +PNT+LT G G S RPP+P GD+ T+S+MP
Sbjct: 1166 TVRNINSSMKPNTILTTSTSPTKKSGHGQDISVVVRPPTPLRGDSIKPTASLMP 1219
>sp|B0Z5I3|NDHH_OENPA NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Oenothera parviflora GN=ndhH PE=3 SV=1
Length = 393
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 78 TFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSM 126
F DP + G EYRF + P+ E + +L VR++ P+G +F +
Sbjct: 294 CFDIEKDPEWDGFEYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342
>sp|B0Z4T1|NDHH_OENAR NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Oenothera argillicola GN=ndhH PE=3 SV=1
Length = 393
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 78 TFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSM 126
F DP + G EYRF + P+ E + +L VR++ P+G +F +
Sbjct: 294 CFDIEKDPEWDGFEYRFISKKPSPTFELPKQELYVRVEAPKGELGIFLI 342
>sp|P59894|DCDC1_HUMAN Doublecortin domain-containing protein 1 OS=Homo sapiens GN=DCDC1
PE=2 SV=2
Length = 354
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 73 RARKVTFFKNGD-PYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSMDGVRI 131
R KVT +KNG F V +P++ L ++ + +++L AR VF DG
Sbjct: 172 RVIKVTAYKNGSRTVFARVT--------VPTITLLLEECTEKLNLNMAARRVFLADGKEA 223
Query: 132 LTLDELEDNASYVVSSYKTFKVRFYPFVFTYLLVR 166
L +++ A VS+ + F F LL++
Sbjct: 224 LEPEDIPHEADVYVSTGEPFLNPFKKIKDHLLLIK 258
>sp|Q06GU0|NDHH_DRIGR NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Drimys
granadensis GN=ndhH PE=3 SV=1
Length = 393
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 66 YDNLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFS 125
Y+NL R F + D + EYRF + P+ E L+ +L VR++ P+G +F
Sbjct: 287 YENLEVRR-----FDRAKDSEWNDFEYRFISKKPSPTFELLKQELYVRVEAPKGELGIFL 341
Query: 126 M 126
+
Sbjct: 342 I 342
>sp|Q33BW6|NDHH_NICTO NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Nicotiana tomentosiformis GN=ndhH PE=3 SV=1
Length = 393
Score = 30.0 bits (66), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 66 YDNLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFS 125
Y+NL R F + DP + EYRF + P+ E + +L VR++ P+G +F
Sbjct: 287 YENLEIRR-----FDRLKDPEWNAFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIFL 341
Query: 126 M 126
+
Sbjct: 342 I 342
>sp|P08037|B4GT1_BOVIN Beta-1,4-galactosyltransferase 1 OS=Bos taurus GN=B4GALT1 PE=1 SV=3
Length = 402
Score = 30.0 bits (66), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 21 LTGGGYWGSRPPSPSGGDNASETSSVMPPPPPQQTQRPKSRAESKYDNLSY 71
L G + + PSG V PPPP Q + +P+SRA S D S+
Sbjct: 60 LQGSSHGAAAIGQPSG---ELRLRGVAPPPPLQNSSKPRSRAPSNLDAYSH 107
>sp|A0A391|NDHH_COFAR NAD(P)H-quinone oxidoreductase subunit H, chloroplastic OS=Coffea
arabica GN=ndhH PE=3 SV=1
Length = 395
Score = 30.0 bits (66), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 66 YDNLSYWRARKVTFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVF 124
Y+NL R+ + DP + EYRF + P+ E + +L VR++ P+G +F
Sbjct: 287 YENLE---IRRFDIDRVKDPEWNDFEYRFISKKPSPTFELSKQELYVRVEAPKGELGIF 342
>sp|Q54RV3|PAKG_DICDI Serine/threonine-protein kinase pakG OS=Dictyostelium discoideum
GN=pakG PE=3 SV=1
Length = 1179
Score = 29.6 bits (65), Expect = 9.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 8 SKAVNTRPRPNTVLTGGGYWGSRPPSPSGGDNASETSSVMPPPPPQQTQRPKSRAES 64
S +N RP T T + +RPPSPS +N + S PP + RP S S
Sbjct: 837 SPKLNNRPLSPTTPTK--QFNNRPPSPSKFNNRPPSPSKFNNRPPSPSNRPLSPKNS 891
>sp|A4GGF2|NDHH_PHAVU NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
OS=Phaseolus vulgaris GN=ndhH PE=3 SV=1
Length = 393
Score = 29.6 bits (65), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 78 TFFKNGDPYFPGVEYRFKPGRDIPSLEALQDKLSVRMDLPRGARYVFSM 126
F + +P + EYRF + PS E + +L VR++ P+G +F +
Sbjct: 294 CFDREKEPEWNEFEYRFISKKSSPSFELPKQELYVRIEAPKGELGIFII 342
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,536,127
Number of Sequences: 539616
Number of extensions: 3183232
Number of successful extensions: 17683
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 107
Number of HSP's that attempted gapping in prelim test: 17225
Number of HSP's gapped (non-prelim): 449
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)