BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12057
(172 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9TSZ7|GCST_CANFA Aminomethyltransferase, mitochondrial OS=Canis familiaris GN=AMT
PE=3 SV=1
Length = 403
Score = 116 bits (290), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 71/109 (65%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR FPGAS+I +Q+K V R+R GLT G P+R I N +G +TSGCP
Sbjct: 293 GKRRRAAMDFPGASVIIAQLKGKVQRRRVGLTCEGAPVRAHSPILNMEGTVIGTVTSGCP 352
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHT 169
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPF+ +NY+T
Sbjct: 353 SPCLKKNVAMGYVPSEYSRPGTPLLVEVRRKQQMAVVSKMPFVTTNYYT 401
>sp|P28337|GCST_CHICK Aminomethyltransferase, mitochondrial OS=Gallus gallus GN=AMT PE=2
SV=2
Length = 392
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 75/117 (64%)
Query: 52 IYSRLLIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQR 111
+ + LL GKRRR FPGA+II Q+K RKR GLTS G P+RP I
Sbjct: 273 VEAGLLWTLGKRRRTAMDFPGAAIIMEQVKEKPKRKRVGLTSVGPPLRPPAAILGPEGTP 332
Query: 112 VGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYH 168
VG +TSGCPSPSL KNIAMGY++ A+S+ G L V VR K+ VTKMPF+ ++Y+
Sbjct: 333 VGTVTSGCPSPSLGKNIAMGYVQAAHSRPGTTLTVEVRKKQHPALVTKMPFVPTHYY 389
>sp|P48728|GCST_HUMAN Aminomethyltransferase, mitochondrial OS=Homo sapiens GN=AMT PE=1
SV=1
Length = 403
Score = 113 bits (283), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/109 (50%), Positives = 70/109 (64%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR FPGA +I Q+K V R+R GL G P+R I N ++G +TSGCP
Sbjct: 293 GKRRRAAMDFPGAKVIVPQLKGRVQRRRVGLMCEGAPMRAHSPILNMEGTKIGTVTSGCP 352
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHT 169
SPSLKKN+AMGY+ YS+ G L V VR K+ V+KMPF+ +NY+T
Sbjct: 353 SPSLKKNVAMGYVPCEYSRPGTMLLVEVRRKQQMAVVSKMPFVPTNYYT 401
>sp|Q8CFA2|GCST_MOUSE Aminomethyltransferase, mitochondrial OS=Mus musculus GN=Amt PE=2
SV=1
Length = 403
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 70/109 (64%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR FPGA II Q+K V R+R GL G P+R I N +G +TSGCP
Sbjct: 293 GKRRRIAMDFPGAKIIVPQLKGEVQRRRVGLICEGAPVRAHSPILNTEGTVIGTVTSGCP 352
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHT 169
SPSLKKN+AMGY+ YS+ G +L V VR K+ V+KMPF+ +NY+T
Sbjct: 353 SPSLKKNVAMGYVPFKYSRPGTQLLVEVRRKQQMTVVSKMPFVPTNYYT 401
>sp|P25285|GCST_BOVIN Aminomethyltransferase, mitochondrial OS=Bos taurus GN=AMT PE=1
SV=1
Length = 397
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 69/108 (63%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR FPGAS+I Q+KS R+R GL G P+R I + +GA+TSGCP
Sbjct: 287 GKRRRAAMDFPGASVIVPQLKSKAQRRRVGLMCDGAPVRAQSPILSPEGTVIGAVTSGCP 346
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYH 168
SP LKKN+AMGY+ YS+ G L V VR K+ V+KMPF+ +NY+
Sbjct: 347 SPCLKKNVAMGYVPYEYSRPGTPLLVEVRRKQQPAVVSKMPFVSTNYY 394
>sp|P54260|GCST_SOLTU Aminomethyltransferase, mitochondrial OS=Solanum tuberosum GN=GDCST
PE=2 SV=1
Length = 406
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/110 (48%), Positives = 68/110 (61%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I QI+ G +R G S+G P R EI ++N Q +G ITSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIEEGPKIRRVGFFSSGPPPRSHSEIQDSNGQNIGEITSGGF 356
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTP 170
SP LKKNIAMGY++ K G + + +R K D VTKMPF+ + Y+ P
Sbjct: 357 SPCLKKNIAMGYVKTGNHKAGTNVKIVIRGKSYDGVVTKMPFVPTKYYKP 406
>sp|O65396|GCST_ARATH Aminomethyltransferase, mitochondrial OS=Arabidopsis thaliana
GN=GDCST PE=1 SV=1
Length = 408
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 70/110 (63%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I Q+K G + +R G S+G P R E+ + + ++G ITSG
Sbjct: 298 GKRRRAEGGFLGADVILQQLKDGPTIRRVGFFSSGPPARSHSEVHDESGNKIGEITSGGF 357
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTP 170
SP+LKKNIAMGY++ K G ++ + VR K + +TKMPF+ + Y+ P
Sbjct: 358 SPNLKKNIAMGYVKSGQHKTGTKVKILVRGKPYEGSITKMPFVATKYYKP 407
>sp|O23936|GCST_FLATR Aminomethyltransferase, mitochondrial OS=Flaveria trinervia
GN=GDCST PE=3 SV=1
Length = 407
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I QI G + +R GL STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGAEVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEQGENIGEVTSGGF 356
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTP 170
SP LKKNI MGY++ K G +L + +R K + VTKMPF+ + Y+ P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
>sp|O49849|GCST_FLAAN Aminomethyltransferase, mitochondrial OS=Flaveria anomala GN=GDCST
PE=3 SV=1
Length = 407
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I QI G + +R GL STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGF 356
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTP 170
SP LKKNI MGY++ K G +L + +R K + VTKMPF+ + Y+ P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
>sp|P49363|GCST_FLAPR Aminomethyltransferase, mitochondrial OS=Flaveria pringlei GN=GDCST
PE=2 SV=1
Length = 407
Score = 100 bits (248), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 67/110 (60%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I QI G + +R GL STG P R EI N + +G +TSG
Sbjct: 297 GKRRRAEGGFLGADVILKQIADGPAIRRVGLFSTGPPARSHSEIQNEKGENIGEVTSGGF 356
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTP 170
SP LKKNI MGY++ K G +L + +R K + VTKMPF+ + Y+ P
Sbjct: 357 SPCLKKNIGMGYVKSGLHKPGTKLKIVIRGKTYEGSVTKMPFVPTKYYKP 406
>sp|P93256|GCST_MESCR Aminomethyltransferase, mitochondrial OS=Mesembryanthemum
crystallinum GN=GDCST PE=2 SV=1
Length = 408
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 67/111 (60%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I QI G ++R G S+G P R EI N + +G ITSG
Sbjct: 298 GKRRRAEGGFLGAEVILKQIADGPPQRRVGFISSGPPARGHSEIQNEKGESIGEITSGGF 357
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTPP 171
SP LKKNIAMGY++ K G ++ + VR K + VTKMPF+ + Y+ P
Sbjct: 358 SPCLKKNIAMGYVKSGNHKAGTKVNILVRGKPYEGVVTKMPFVPTKYYKSP 408
>sp|Q54DD3|GCST_DICDI Aminomethyltransferase, mitochondrial OS=Dictyostelium discoideum
GN=gcvT PE=3 SV=1
Length = 403
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
Query: 62 KRRRETGGFPGASIIQSQI-KSGVSRKRTGLTSTGVPIRPGYEIFN-ANDQRVGAITSGC 119
KRRRE GGFPGASIIQ Q+ K G +KR G+ G P R G I + + +Q +G +TSG
Sbjct: 293 KRRREEGGFPGASIIQKQLQKDGCPQKRVGVIINGAPAREGCLILDPSTNQEIGKVTSGT 352
Query: 120 PSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNY 167
SP +++I+M Y++ +SK+G ++ V +R K + ++KMPF+ +NY
Sbjct: 353 ISPITRQSISMAYVKTPFSKIGTQVNVSIRGKPITATISKMPFVPTNY 400
>sp|O14110|GCST_SCHPO Probable aminomethyltransferase, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=gcv1 PE=3 SV=1
Length = 387
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 69/108 (63%), Gaps = 1/108 (0%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR+ GGF G+S I ++K G SR+R G VP R G + + VG +TSGCP
Sbjct: 280 GKRRRKEGGFVGSSRILKELKDGPSRRRVGFIVEKVPARHGSAV-EVDGVEVGQVTSGCP 338
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYH 168
SP+L KNIAMGYI +VG ++VR+K +V +MPF++++Y+
Sbjct: 339 SPTLGKNIAMGYISTGLHQVGTPAHIKVRNKLHPAQVVRMPFVETHYY 386
>sp|P49364|GCST_PEA Aminomethyltransferase, mitochondrial OS=Pisum sativum GN=GDCST
PE=1 SV=2
Length = 408
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 67/110 (60%)
Query: 61 GKRRRETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPIRPGYEIFNANDQRVGAITSGCP 120
GKRRR GGF GA +I Q+ G S +R G S+G P R EI + +G +TSG
Sbjct: 298 GKRRRAEGGFLGADVILKQLADGPSIRRVGFISSGPPPRSHSEIQDEGGNNIGEVTSGGF 357
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNYHTP 170
SP LKKNIA+GY++ K G ++ + +R K+ + VTKMPF+ + Y+ P
Sbjct: 358 SPCLKKNIAIGYVKSGLHKAGTKVKIIIRGKQNEGVVTKMPFVPTKYYKP 407
>sp|A6L8T3|GCST_PARD8 Aminomethyltransferase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=gcvT PE=3 SV=1
Length = 361
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 3/101 (2%)
Query: 66 ETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPS 123
E F + ++ Q K GV+RK L G+P R GYEI +A +G +TSG SP
Sbjct: 262 EGKNFTNRAELERQKKEGVTRKLCAFELQEKGIP-RHGYEIADAEGNVIGVVTSGTMSPV 320
Query: 124 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
LKK I MGY++P ++K G +++++VR+K + +V K PF K
Sbjct: 321 LKKGIGMGYVKPEFAKAGTDIFIKVRNKNLKAQVVKAPFRK 361
>sp|Q7MUG4|GCST_PORGI Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=gcvT PE=3 SV=1
Length = 362
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 71 PGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNI 128
P I++ Q G+ RK L G+P R YEI NA Q +G +TSG SP LKK I
Sbjct: 268 PSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGI 326
Query: 129 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
MGY+ +SKVG EL + VR +++ ++ K PF K
Sbjct: 327 GMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPFRK 362
>sp|B2RI74|GCST_PORG3 Aminomethyltransferase OS=Porphyromonas gingivalis (strain ATCC
33277 / DSM 20709 / JCM 12257) GN=gcvT PE=3 SV=1
Length = 362
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 71 PGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNI 128
P I++ Q G+ RK L G+P R YEI NA Q +G +TSG SP LKK I
Sbjct: 268 PSRKIMEEQKAGGLKRKLVAFELKDKGIP-RQHYEIANAEGQIIGEVTSGTMSPCLKKGI 326
Query: 129 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
MGY+ +SKVG EL + VR +++ ++ K PF K
Sbjct: 327 GMGYVATEFSKVGTELGIMVRGRQLKAEIVKPPFRK 362
>sp|A6L6X5|GCST_BACV8 Aminomethyltransferase OS=Bacteroides vulgatus (strain ATCC 8482 /
DSM 1447 / NCTC 11154) GN=gcvT PE=3 SV=1
Length = 361
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 66 ETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPS 123
E F ++++ Q G+ RK + G+P R GYE+ NA+ +++G +TSG SP
Sbjct: 262 EGKNFTSRALLEKQKAEGLKRKLIAFEMVDRGIP-RHGYELVNADGEKIGEVTSGTMSPM 320
Query: 124 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
K I MGY++ AY+ +G E+++ VR +++ V K PF K
Sbjct: 321 RKIGIGMGYVQTAYTALGTEIFIDVRGRKLKAVVVKAPFRK 361
>sp|C5D4A2|GCST_GEOSW Aminomethyltransferase OS=Geobacillus sp. (strain WCH70) GN=gcvT
PE=3 SV=1
Length = 364
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 59/97 (60%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G +++ Q + G +RK G+ G+P R GY++F AN + +G +T+G SP+LKKN
Sbjct: 267 FIGKDVLKKQKEEGTARKLVGIEMIDKGIP-RHGYKVF-ANGEEIGFVTTGTQSPTLKKN 324
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
I + I+ ++++ E+ V +R KR+ KV PF K
Sbjct: 325 IGLALIKTEFTEMDTEVEVEIRGKRLKAKVIATPFYK 361
>sp|Q9K934|GCST_BACHD Aminomethyltransferase OS=Bacillus halodurans (strain ATCC BAA-125
/ DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=gcvT PE=3
SV=1
Length = 365
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGL--TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G I++ Q + G RK GL G+P R GYE++ ++Q++G +T+G SP+LKKN
Sbjct: 268 FIGKEILKKQKEQGAPRKLVGLEMVDKGIP-RTGYEVY-VDNQKIGFVTTGTQSPTLKKN 325
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+ + ++ +S++G E+ V VR +++ KV PF K
Sbjct: 326 VGLALLQAEHSELGTEVIVHVRKRQLIAKVVATPFYK 362
>sp|A0AIE9|GCST_LISW6 Aminomethyltransferase OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=gcvT PE=3 SV=1
Length = 362
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 57 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGA 114
L F K ++E F G + Q ++G++RK G L G+P R Y +F ND+ VG
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNDKEVGI 309
Query: 115 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+TSG SP+ NI + I+ AY+++G EL V +R+K+V K+ + PF K
Sbjct: 310 VTSGTQSPTFGTNIGLALIDTAYAELGQELEVGIRNKKVKAKIVQTPFYK 359
>sp|Q92C06|GCST_LISIN Aminomethyltransferase OS=Listeria innocua serovar 6a (strain CLIP
11262) GN=gcvT PE=3 SV=1
Length = 362
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 57 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGA 114
L F K ++E F G + Q ++G++RK G L G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKQALIKQKEAGLTRKLVGIELIERGIP-RHDYPVF-LNDKEIGV 309
Query: 115 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
ITSG SP+L NI + I+ AY+++ EL V +R+K+V KV + PF K
Sbjct: 310 ITSGTQSPTLGTNIGLALIDTAYTELDQELEVGIRNKKVKAKVVQTPFYK 359
>sp|Q89YZ6|GCST_BACTN Aminomethyltransferase OS=Bacteroides thetaiotaomicron (strain ATCC
29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482) GN=gcvT
PE=3 SV=1
Length = 361
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%), Gaps = 3/92 (3%)
Query: 75 IIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGY 132
+++ Q G +RK G + G+P R GYE+ N + +G +TSG SP+ K I MGY
Sbjct: 271 MLEKQKSEGTTRKLVGFEMIDRGIP-RHGYELVNEEGEGIGVVTSGTMSPTRKIGIGMGY 329
Query: 133 IEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
++P Y+KVG E+ + +R +++ V K PF K
Sbjct: 330 VKPEYAKVGTEICIDMRGRKLKAIVVKPPFRK 361
>sp|Q64WS3|GCST_BACFR Aminomethyltransferase OS=Bacteroides fragilis (strain YCH46)
GN=gcvT PE=3 SV=1
Length = 361
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 70 FPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F S+++ Q G RK G + G+P R GYE+ A ++G +TSG SP K
Sbjct: 266 FTNRSMLEKQKAEGTVRKLVGFEMIDRGIP-RHGYELTTAEGDKIGVVTSGTMSPIRKIG 324
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
I MGY++P YSK+G E+ + +R +++ V K PF K
Sbjct: 325 IGMGYVKPEYSKIGTEICIDMRGRKLKAVVVKPPFRK 361
>sp|Q5LFT6|GCST_BACFN Aminomethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 /
NCTC 9343) GN=gcvT PE=3 SV=1
Length = 361
Score = 69.7 bits (169), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 70 FPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F S+++ Q G RK G + G+P R GYE+ A ++G +TSG SP K
Sbjct: 266 FTNRSMLEKQKAEGTVRKLVGFEMIDRGIP-RHGYELTTAEGDKIGVVTSGTMSPIRKIG 324
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
I MGY++P YSK+G E+ + +R +++ V K PF K
Sbjct: 325 IGMGYVKPEYSKIGTEICIDMRGRKLKAVVVKPPFRK 361
>sp|B8DFY0|GCST_LISMH Aminomethyltransferase OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=gcvT PE=3 SV=1
Length = 362
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 57 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGA 114
L F K ++E F G + Q ++G++RK G L G+P R Y +F ND+ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNDEEIGI 309
Query: 115 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTELGQEVEVGIRNKKIKAKIVPTPFYK 359
>sp|Q8DKV6|GCST_THEEB Aminomethyltransferase OS=Thermosynechococcus elongatus (strain
BP-1) GN=gcvT PE=3 SV=1
Length = 366
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 128
F G + + +Q + G+ R+ GL G I R GY I+ A Q VG +TSG SP+L K I
Sbjct: 264 FVGRAALLAQKQQGIERQLVGLELLGKGIARHGYPIY-AGAQAVGEVTSGTLSPTLGKAI 322
Query: 129 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
A+GY+ P ++ +G EL V+VRD+ V V PF +
Sbjct: 323 ALGYVFPEFAHIGRELAVQVRDRWVPAVVVPRPFYR 358
>sp|Q71ZX4|GCST_LISMF Aminomethyltransferase OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=gcvT PE=3 SV=1
Length = 362
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 5/110 (4%)
Query: 57 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGA 114
L F K ++E F G + Q ++G++RK G L G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 115 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+TSG SP+L NI + I+ AY+++G E+ V +R+K++ K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKIKAKIVPTPFYK 359
>sp|A7Z6M4|GCST_BACA2 Aminomethyltransferase OS=Bacillus amyloliquefaciens (strain FZB42)
GN=gcvT PE=3 SV=1
Length = 366
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 59/104 (56%), Gaps = 4/104 (3%)
Query: 63 RRRETGGFPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCP 120
+ ++ F G S+++ Q + G RK GL G+P R GY + + +G +T+G
Sbjct: 260 KHKKDSDFFGKSVLREQKEKGAPRKLVGLEMIEKGIP-RHGYAV-KKDGVPIGEVTTGTQ 317
Query: 121 SPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
SP+LKKNI + I+ +S+VG E+ V +R K V K+ + PF K
Sbjct: 318 SPTLKKNIGLALIKTEFSEVGTEVEVEIRKKTVKAKIVRTPFYK 361
>sp|Q8CXD9|GCST_OCEIH Aminomethyltransferase OS=Oceanobacillus iheyensis (strain DSM
14371 / JCM 11309 / KCTC 3954 / HTE831) GN=gcvT PE=3
SV=2
Length = 371
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G ++++Q+++G RK G+ G+P R YE+ N + +G ITSG SP+L KN
Sbjct: 274 FIGKEVLKNQVENGTDRKLVGIEMIDKGIP-RHEYEVLKDN-KEIGFITSGTQSPTLNKN 331
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+ + I +Y+++G E+ V+VR + + K+ PF K
Sbjct: 332 VGLALINISYTEIGTEVDVKVRKRILKAKIVPTPFYK 368
>sp|Q8Y7D5|GCST_LISMO Aminomethyltransferase OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=gcvT PE=3 SV=1
Length = 362
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 57 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGA 114
L F K ++E F G + Q ++G++RK G L G+P R Y +F N++++G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEAGLNRKLVGIELIERGIP-RHDYPVF-LNEEQIGV 309
Query: 115 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGINIGLALIDTAYTELGQEVEVGIRNKKVKAKIVPTPFYK 359
>sp|C1L2Q4|GCST_LISMC Aminomethyltransferase OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=gcvT PE=3 SV=1
Length = 362
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 57 LIFPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGA 114
L F K ++E F G + Q + G++RK G L G+P R Y +F N++ +G
Sbjct: 253 LNFAVKLKKEAD-FIGKEALIKQKEVGLNRKLVGIELIERGIP-RHDYPVF-LNEEEIGI 309
Query: 115 ITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+TSG SP+L NI + I+ AY+++G E+ V +R+K+V K+ PF K
Sbjct: 310 VTSGTQSPTLGTNIGLALIDTAYTEIGQEVEVGIRNKKVKAKIVPTPFYK 359
>sp|B1XP99|GCST_SYNP2 Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=gcvT PE=3 SV=1
Length = 363
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 65 RETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPS 123
+E F I+Q+Q +GV R+ GL G I R Y + N + VG +TSG SP+
Sbjct: 260 QEKDAFIAKDILQTQKAAGVQRRLVGLEMQGRGIARHDYSVL-VNGEAVGLVTSGTMSPT 318
Query: 124 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSN 166
L+K IA+ Y+ +SKVG + V +R K+ +V K PF +++
Sbjct: 319 LEKAIALAYLPLEFSKVGQAVTVEIRGKQYPAQVVKKPFYRAS 361
>sp|B7GH71|GCST_ANOFW Aminomethyltransferase OS=Anoxybacillus flavithermus (strain DSM
21510 / WK1) GN=gcvT PE=3 SV=1
Length = 364
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 128
F G I++ Q + G R+ G+ I R GY ++ N++++G +T+G SP+LKKNI
Sbjct: 267 FFGKEILKKQKEEGAPRRLVGIEMIDKGIARHGYAVY-VNNEQIGFVTTGTQSPTLKKNI 325
Query: 129 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+ I A+S + E+ V VR KR+ +V PF K
Sbjct: 326 GLALISTAFSSLDTEVEVDVRGKRLKARVVATPFYK 361
>sp|Q7TUI6|GCST_PROMM Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9313)
GN=gcvT PE=3 SV=1
Length = 374
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 128
F G + ++ Q + G R+ GL +G I R GY + + N+ +VG ITSG SPSL++ I
Sbjct: 275 FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLH-NNNKVGEITSGTWSPSLEEAI 333
Query: 129 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
A+GY+ A +++G E+ V +R K V K PF +
Sbjct: 334 ALGYLPTALARIGNEVEVEIRGKHHRATVVKRPFYR 369
>sp|Q5N136|GCST_SYNP6 Aminomethyltransferase OS=Synechococcus sp. (strain ATCC 27144 /
PCC 6301 / SAUG 1402/1) GN=gcvT PE=3 SV=1
Length = 372
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 75 IIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYI 133
++Q++ +G+ R+ GL G I R GY + A D VG +TSG SP+L K IA+ Y+
Sbjct: 279 LVQAK-TNGLERRLVGLELPGRNIARHGYPVAIA-DTTVGIVTSGSWSPTLSKAIALAYV 336
Query: 134 EPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSN 166
PA + +G ELWV +R K+V V K PF + +
Sbjct: 337 PPALANLGQELWVEIRGKQVPATVVKRPFYRGS 369
>sp|Q31KT1|GCST_SYNE7 Aminomethyltransferase OS=Synechococcus elongatus (strain PCC 7942)
GN=gcvT PE=3 SV=1
Length = 372
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 75 IIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYI 133
++Q++ +G+ R+ GL G I R GY + A D VG +TSG SP+L K IA+ Y+
Sbjct: 279 LVQAK-TNGLERRLVGLELPGRNIARHGYPVAIA-DTTVGIVTSGSWSPTLSKAIALAYV 336
Query: 134 EPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSN 166
PA + +G ELWV +R K+V V K PF + +
Sbjct: 337 PPALANLGQELWVEIRGKQVPATVVKRPFYRGS 369
>sp|C1F933|GCST_ACIC5 Aminomethyltransferase OS=Acidobacterium capsulatum (strain ATCC
51196 / DSM 11244 / JCM 7670) GN=gcvT PE=3 SV=1
Length = 378
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 9/134 (6%)
Query: 40 NTILLELFLAM---DIYSRLLIFPGKRRR----ETGGFPGASIIQSQI-KSGVSRKRTGL 91
NT+ LE +A+ +I + +F R + G F G+ ++ + + G RK GL
Sbjct: 239 NTLRLESAMALYGHEISQDIDVFEAGLDRYCKLDKGTFVGSEALKQVVAQGGPKRKLVGL 298
Query: 92 TSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRD 150
I R GY + N Q VG +TSG P+P LKKNIA+ Y+ + + E++V +R+
Sbjct: 299 EMIDRGIARDGYRVLNDTQQAVGYVTSGSPAPFLKKNIALAYVPTELATLDREVFVEIRN 358
Query: 151 KRVDVKVTKMPFLK 164
V ++ PF +
Sbjct: 359 NPVKARIVPTPFYR 372
>sp|A4J2F6|GCST_DESRM Aminomethyltransferase OS=Desulfotomaculum reducens (strain MI-1)
GN=gcvT PE=3 SV=1
Length = 364
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G + Q ++G + + GL G+P R GY IF Q VG ITSG +P+L KN
Sbjct: 267 FVGKEPLLKQKEAGTTYQLVGLEMIDRGIP-RQGYAIFKEG-QEVGWITSGTFAPTLGKN 324
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+ +GY+E ++ VG EL + VR+K + ++ K PF K
Sbjct: 325 MGLGYVEIPFADVGKELNIMVRNKPLKARIVKKPFYK 361
>sp|A2CDX3|GCST_PROM3 Aminomethyltransferase OS=Prochlorococcus marinus (strain MIT 9303)
GN=gcvT PE=3 SV=1
Length = 374
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKKNI 128
F G + ++ Q + G R+ GL +G I R GY + + N+ +VG ITSG SPSL + I
Sbjct: 275 FMGRTALEQQAEQGPIRRLVGLKLSGRAIARHGYPLLH-NNNKVGEITSGTWSPSLGEAI 333
Query: 129 AMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
A+GY+ A +++G E+ V +R K V K PF +
Sbjct: 334 ALGYLPTALARIGNEVAVEIRGKHHPATVVKRPFYR 369
>sp|A6TMY6|GCST_ALKMQ Aminomethyltransferase OS=Alkaliphilus metalliredigens (strain
QYMF) GN=gcvT PE=3 SV=1
Length = 369
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Query: 59 FPGKRRRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAIT 116
F K ++E F G + Q ++G++RK G + G+P R YE+++ +++G +T
Sbjct: 260 FAVKLKKEVD-FLGKKALIEQKEAGLTRKLVGFEMKDRGIP-RSDYEVYHQG-EKIGFVT 316
Query: 117 SGCPSPSLKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNY 167
+G SP+LK+NI + I+ Y+++G E+ + +R K+V ++ F K NY
Sbjct: 317 TGYFSPTLKRNIGLALIDAKYAELGNEVDILIRKKQVKAELISKTFYKKNY 367
>sp|P54261|GCST_SYNY3 Aminomethyltransferase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=gcvT PE=3 SV=1
Length = 372
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 68 GGFPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSLKK 126
G F G +++ Q +GV ++ GL I R Y I + N + +G +TSG SP+L+K
Sbjct: 270 GDFIGRAVLTEQKANGVEKRLVGLEMLAKQIARHDYPILH-NGEIMGIVTSGTLSPTLQK 328
Query: 127 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSN 166
IA+GY+ +KVG EL V VR K +KV K F +S
Sbjct: 329 AIALGYVPTELAKVGQELEVEVRGKTYGIKVVKKLFYRSE 368
>sp|A6GXW3|GCST_FLAPJ Aminomethyltransferase OS=Flavobacterium psychrophilum (strain
JIP02/86 / ATCC 49511) GN=gcvT PE=3 SV=1
Length = 360
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 70 FPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F ++ ++ Q + GV+RK + VP R YEI +A+ +G +TSG SPS+
Sbjct: 264 FTNSANLKKQKEEGVARKLVAFEMQERAVP-RHDYEIVDASGNVIGIVTSGTMSPSMNIG 322
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
I +GY+ ++S V ++++R+R V KV K+PF K
Sbjct: 323 IGLGYVPTSFSTVDSDIFIRIRKNDVLAKVVKLPFYK 359
>sp|Q6A9R6|GCST_PROAC Aminomethyltransferase OS=Propionibacterium acnes (strain KPA171202
/ DSM 16379) GN=gcvT PE=3 SV=1
Length = 371
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 65 RETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPS 123
++ G F G ++++ + R GLT G R GY + N D+ VGAITSG SP+
Sbjct: 271 KKEGDFVGRCALENR-DTTADRVLVGLTGEGRRAGRAGYAVVN-EDKTVGAITSGILSPT 328
Query: 124 LKKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
L IAM +++P +K+G L V VR K ++ V ++PF K
Sbjct: 329 LGHPIAMAFVDPDVAKIGTSLSVDVRGKALNTTVVELPFYK 369
>sp|A9B2Q5|GCST_HERA2 Aminomethyltransferase OS=Herpetosiphon aurantiacus (strain ATCC
23779 / DSM 785) GN=gcvT PE=3 SV=1
Length = 361
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 1/103 (0%)
Query: 66 ETGGFPGASIIQSQIKSGVSRKRTGLTSTGVPI-RPGYEIFNANDQRVGAITSGCPSPSL 124
+ G F G+ + +G R GL TG I R GY + + +G +T+G PSPSL
Sbjct: 257 DKGPFIGSEALHDIKANGPVRTLVGLEMTGRGIARQGYPVVALDGSELGVVTTGMPSPSL 316
Query: 125 KKNIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSNY 167
KN+A ++ K+G E+ V +R+K V V K PF K+ Y
Sbjct: 317 GKNLAYALVKAGSLKIGAEVDVLIREKPVRATVVKTPFYKARY 359
>sp|Q8RCV9|GCST_THETN Aminomethyltransferase OS=Thermoanaerobacter tengcongensis (strain
DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN=gcvT PE=3
SV=1
Length = 374
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 64 RRETGGFPGASIIQSQIKSGVSRKRTG--LTSTGVPIRPGYEIFNANDQRVGAITSGCPS 121
+ + G F G + Q + G+ RK G + G+P R GYE+ A++Q++G +T+G S
Sbjct: 269 KFDKGNFIGKDALLKQKEQGLKRKLVGFEMIGNGIP-RHGYEV-QADNQKIGYVTTGYFS 326
Query: 122 PSLKKNIAMGYIEPAYSKVGVELWVRVRDK 151
P+LKKNI + I+ Y+++G ++ V +R+K
Sbjct: 327 PTLKKNIGLALIDSKYAQIGNQIEVIIRNK 356
>sp|A9VH12|GCST_BACWK Aminomethyltransferase OS=Bacillus weihenstephanensis (strain
KBAB4) GN=gcvT PE=3 SV=1
Length = 366
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G ++ Q ++G SRK G+ G+P R Y +F ++++G +TSG SP+LKK+
Sbjct: 269 FFGKETLKEQKENGASRKLVGIEVIERGIP-RTHYPVF-IGEEKIGEVTSGTQSPTLKKS 326
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
I + I+ Y+ V E+ + +R+KRV V PF K
Sbjct: 327 IGLALIDVKYAAVDTEVEIEIRNKRVKAVVVPTPFYK 363
>sp|A8FF41|GCST_BACP2 Aminomethyltransferase OS=Bacillus pumilus (strain SAFR-032)
GN=gcvT PE=3 SV=1
Length = 365
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G ++ Q + G RK G+ G+P R Y +F+ Q +G +T+G SP+LKKN
Sbjct: 268 FIGKEALKKQKEEGPKRKLVGIEMIDKGIP-RTDYPVFSGEKQ-IGVVTTGTQSPTLKKN 325
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+ + IE + +++G + V+VR KR+ K+ PF K
Sbjct: 326 VGLALIESSQAQLGTVVEVQVRKKRLKAKIVATPFYK 362
>sp|A4FLG1|GCST_SACEN Aminomethyltransferase OS=Saccharopolyspora erythraea (strain NRRL
23338) GN=gcvT PE=3 SV=1
Length = 367
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Query: 68 GGFPGASIIQSQIKSGVSRKRTGL-TSTGVPIRPGYEIFNANDQRVGAITSGCPSPSLKK 126
G F G + + + + RK GL T R GY + +A +G +TSG PSP+L
Sbjct: 267 GDFVGKAPLAAAAEKPTERKLVGLRTDQRRAPRHGYRVLDAGGAEIGVVTSGAPSPTLGH 326
Query: 127 NIAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLKSN 166
IAM Y++ +++ G L V +R V V+V +PF + N
Sbjct: 327 PIAMAYVDRDHAEPGTALQVDIRGTAVPVEVVALPFYRRN 366
>sp|Q65HF9|GCST_BACLD Aminomethyltransferase OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=gcvT PE=3 SV=1
Length = 364
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 70 FPGASIIQSQIKSGVSRKRTGLT--STGVPIRPGYEIFNANDQRVGAITSGCPSPSLKKN 127
F G +++ SQ + G RK GL G+P R GY ++ +Q G +T+G SP+LKKN
Sbjct: 267 FIGKAVLASQKEHGADRKLVGLEMIDKGIP-RHGYAVYYQGEQ-AGEVTTGTQSPTLKKN 324
Query: 128 IAMGYIEPAYSKVGVELWVRVRDKRVDVKVTKMPFLK 164
+ + ++ + + V +R+KR+ K+ K PF K
Sbjct: 325 VGLALLKKEACALDTVVEVEIRNKRLKAKIVKTPFYK 361
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.422
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,539,459
Number of Sequences: 539616
Number of extensions: 2389632
Number of successful extensions: 4980
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 163
Number of HSP's that attempted gapping in prelim test: 4764
Number of HSP's gapped (non-prelim): 336
length of query: 172
length of database: 191,569,459
effective HSP length: 109
effective length of query: 63
effective length of database: 132,751,315
effective search space: 8363332845
effective search space used: 8363332845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)